Query 021783
Match_columns 307
No_of_seqs 154 out of 2165
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 05:38:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021783.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021783hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK08861 cystathionine gamma-s 100.0 1.8E-48 3.9E-53 337.3 34.6 305 1-305 78-384 (388)
2 COG0626 MetC Cystathionine bet 100.0 6.3E-48 1.4E-52 327.1 33.6 305 1-305 88-395 (396)
3 TIGR01329 cysta_beta_ly_E cyst 100.0 1.5E-47 3.2E-52 332.7 34.8 306 1-306 72-377 (378)
4 PRK08045 cystathionine gamma-s 100.0 6.4E-47 1.4E-51 328.8 34.9 305 1-305 77-383 (386)
5 PLN02509 cystathionine beta-ly 100.0 6.5E-47 1.4E-51 332.5 34.5 306 1-306 158-463 (464)
6 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 6E-47 1.3E-51 325.7 33.0 303 1-303 80-386 (386)
7 PRK06176 cystathionine gamma-s 100.0 1.2E-46 2.6E-51 326.7 34.7 306 1-306 75-380 (380)
8 TIGR02080 O_succ_thio_ly O-suc 100.0 1.4E-46 3E-51 326.6 34.7 304 1-304 76-381 (382)
9 PRK07671 cystathionine beta-ly 100.0 2.9E-46 6.3E-51 324.3 35.2 303 1-303 75-377 (377)
10 PRK08064 cystathionine beta-ly 100.0 4.1E-46 9E-51 325.0 35.0 305 1-305 79-383 (390)
11 PRK08776 cystathionine gamma-s 100.0 4.6E-46 9.9E-51 325.1 35.0 305 1-305 85-391 (405)
12 PRK09028 cystathionine beta-ly 100.0 8.2E-46 1.8E-50 320.3 34.2 299 1-304 86-387 (394)
13 PRK07504 O-succinylhomoserine 100.0 1E-45 2.2E-50 323.1 34.8 304 2-305 91-396 (398)
14 PRK08248 O-acetylhomoserine am 100.0 1.4E-45 3.1E-50 323.8 34.3 305 1-305 89-428 (431)
15 PRK08249 cystathionine gamma-s 100.0 1.8E-45 3.8E-50 321.0 34.3 304 1-305 89-394 (398)
16 PRK08114 cystathionine beta-ly 100.0 2.4E-45 5.1E-50 316.4 32.0 300 1-305 87-394 (395)
17 PRK08574 cystathionine gamma-s 100.0 1.1E-44 2.4E-49 314.9 35.4 303 1-305 78-385 (385)
18 PRK07811 cystathionine gamma-s 100.0 1.2E-44 2.5E-49 315.7 35.3 301 1-304 86-388 (388)
19 PRK07810 O-succinylhomoserine 100.0 9.4E-45 2E-49 316.9 34.7 302 1-302 95-402 (403)
20 PRK08133 O-succinylhomoserine 100.0 9.4E-45 2E-49 316.5 33.9 303 1-304 86-390 (390)
21 PRK05939 hypothetical protein; 100.0 1.8E-44 3.9E-49 314.2 34.9 303 1-304 72-396 (397)
22 TIGR01328 met_gam_lyase methio 100.0 1.6E-44 3.6E-49 314.8 34.4 303 2-305 85-391 (391)
23 PRK06702 O-acetylhomoserine am 100.0 1.3E-44 2.8E-49 315.3 33.6 305 1-305 86-425 (432)
24 PRK07812 O-acetylhomoserine am 100.0 1.7E-44 3.7E-49 316.4 34.5 305 1-305 94-432 (436)
25 PRK05967 cystathionine beta-ly 100.0 1.5E-44 3.3E-49 311.7 33.3 298 1-305 89-392 (395)
26 COG2873 MET17 O-acetylhomoseri 100.0 8.3E-45 1.8E-49 295.5 29.3 304 1-304 87-425 (426)
27 PRK06234 methionine gamma-lyas 100.0 2.2E-44 4.7E-49 315.2 34.3 304 1-305 89-398 (400)
28 cd00614 CGS_like CGS_like: Cys 100.0 3.7E-44 8.1E-49 311.6 35.0 303 1-303 65-369 (369)
29 KOG0053 Cystathionine beta-lya 100.0 1.3E-44 2.7E-49 302.8 30.0 304 1-305 102-407 (409)
30 PRK06084 O-acetylhomoserine am 100.0 4.1E-44 8.9E-49 314.4 34.4 305 1-305 83-423 (425)
31 PRK05613 O-acetylhomoserine am 100.0 4.5E-44 9.8E-49 313.8 33.7 304 1-304 94-436 (437)
32 TIGR01324 cysta_beta_ly_B cyst 100.0 7.8E-44 1.7E-48 308.2 34.7 300 1-305 75-377 (377)
33 TIGR01325 O_suc_HS_sulf O-succ 100.0 6.3E-44 1.4E-48 310.7 34.4 301 1-302 79-380 (380)
34 PRK06460 hypothetical protein; 100.0 9.1E-44 2E-48 308.8 34.9 303 2-305 71-375 (376)
35 PRK05994 O-acetylhomoserine am 100.0 8.7E-44 1.9E-48 313.1 34.9 304 1-304 88-426 (427)
36 PRK08134 O-acetylhomoserine am 100.0 9.9E-44 2.1E-48 312.0 34.7 305 1-305 89-428 (433)
37 PRK07503 methionine gamma-lyas 100.0 1.1E-43 2.5E-48 310.7 33.9 304 1-305 90-397 (403)
38 PRK07049 methionine gamma-lyas 100.0 3.6E-43 7.9E-48 308.9 34.9 303 1-304 108-426 (427)
39 PRK06767 methionine gamma-lyas 100.0 1.1E-42 2.3E-47 303.7 33.9 299 1-305 86-386 (386)
40 TIGR01326 OAH_OAS_sulfhy OAH/O 100.0 1.6E-42 3.6E-47 305.0 33.9 302 1-303 82-418 (418)
41 PRK07050 cystathionine beta-ly 100.0 4.3E-42 9.3E-47 299.6 33.0 299 1-305 90-392 (394)
42 PRK06434 cystathionine gamma-l 100.0 2.1E-41 4.6E-46 292.2 32.2 294 1-304 89-384 (384)
43 PRK07582 cystathionine gamma-l 100.0 4.1E-41 8.9E-46 291.4 32.2 290 2-305 76-366 (366)
44 PLN02242 methionine gamma-lyas 100.0 5.2E-41 1.1E-45 294.2 33.1 302 2-307 102-418 (418)
45 PRK05968 hypothetical protein; 100.0 9.7E-41 2.1E-45 291.2 33.2 297 1-305 88-387 (389)
46 PRK07269 cystathionine gamma-s 100.0 2.1E-40 4.6E-45 285.8 32.9 285 1-303 79-363 (364)
47 PRK08247 cystathionine gamma-s 100.0 2.4E-40 5.2E-45 287.1 33.4 289 1-305 77-365 (366)
48 COG0520 csdA Selenocysteine ly 100.0 4.8E-34 1E-38 247.7 20.5 267 11-305 108-402 (405)
49 COG0436 Aspartate/tyrosine/aro 100.0 1.5E-30 3.2E-35 226.3 24.7 261 3-304 101-391 (393)
50 COG1104 NifS Cysteine sulfinat 100.0 1.2E-30 2.6E-35 218.6 20.2 265 12-302 89-371 (386)
51 PRK09295 bifunctional cysteine 100.0 4.5E-29 9.7E-34 220.6 20.7 260 10-304 109-400 (406)
52 PRK05957 aspartate aminotransf 100.0 3.8E-28 8.3E-33 213.3 24.6 258 5-305 104-386 (389)
53 TIGR03392 FeS_syn_CsdA cystein 100.0 9.7E-29 2.1E-33 218.0 20.9 256 11-302 103-389 (398)
54 PRK10874 cysteine sulfinate de 100.0 3.1E-28 6.8E-33 215.0 24.1 256 11-302 106-392 (401)
55 PRK07324 transaminase; Validat 100.0 5.4E-28 1.2E-32 210.9 24.2 254 5-304 95-370 (373)
56 PRK06207 aspartate aminotransf 100.0 6.1E-28 1.3E-32 212.8 24.3 259 3-305 114-403 (405)
57 PLN02855 Bifunctional selenocy 100.0 1.4E-28 3E-33 218.6 20.2 261 10-303 118-413 (424)
58 PRK07681 aspartate aminotransf 100.0 1E-27 2.2E-32 211.3 24.2 253 3-300 105-384 (399)
59 COG0079 HisC Histidinol-phosph 100.0 4.9E-28 1.1E-32 207.0 20.2 253 6-305 91-355 (356)
60 TIGR03403 nifS_epsilon cystein 100.0 1.4E-27 3.1E-32 209.5 21.5 265 12-303 87-370 (382)
61 PRK15481 transcriptional regul 100.0 3.1E-27 6.7E-32 210.2 23.8 254 3-303 153-430 (431)
62 PLN00175 aminotransferase fami 100.0 3.4E-27 7.4E-32 208.3 23.8 259 3-303 127-412 (413)
63 TIGR01979 sufS cysteine desulf 100.0 1.8E-27 3.9E-32 210.4 21.1 260 11-304 105-401 (403)
64 PRK06108 aspartate aminotransf 100.0 2.3E-27 4.9E-32 208.4 21.2 254 5-302 99-380 (382)
65 TIGR03540 DapC_direct LL-diami 100.0 7.3E-27 1.6E-31 205.1 23.9 241 3-288 103-368 (383)
66 TIGR01977 am_tr_V_EF2568 cyste 100.0 1E-26 2.2E-31 203.9 24.8 270 5-304 77-375 (376)
67 PLN02187 rooty/superroot1 100.0 1.3E-26 2.9E-31 206.7 25.8 257 3-303 143-437 (462)
68 TIGR03402 FeS_nifS cysteine de 100.0 2.2E-27 4.8E-32 208.1 20.4 264 12-302 84-366 (379)
69 PLN02651 cysteine desulfurase 100.0 1.5E-27 3.2E-32 207.9 18.6 262 10-296 84-364 (364)
70 PRK06290 aspartate aminotransf 100.0 2.1E-26 4.5E-31 202.8 25.1 255 3-306 118-407 (410)
71 PRK05942 aspartate aminotransf 100.0 9E-27 1.9E-31 205.0 22.3 254 3-302 109-387 (394)
72 PRK07366 succinyldiaminopimela 100.0 9.1E-27 2E-31 204.7 22.1 253 3-300 104-386 (388)
73 PRK08361 aspartate aminotransf 100.0 1.3E-26 2.9E-31 203.8 22.7 256 5-304 108-390 (391)
74 COG1167 ARO8 Transcriptional r 100.0 1.3E-26 2.7E-31 206.1 22.3 261 3-304 167-455 (459)
75 PRK08960 hypothetical protein; 100.0 4.7E-26 1E-30 200.1 25.5 255 3-301 104-381 (387)
76 PRK08068 transaminase; Reviewe 100.0 3.1E-26 6.8E-31 201.3 24.3 249 5-299 109-381 (389)
77 PRK09147 succinyldiaminopimela 100.0 2.7E-26 5.9E-31 202.2 23.9 256 5-302 105-394 (396)
78 PRK08912 hypothetical protein; 100.0 2.4E-26 5.3E-31 202.0 23.3 258 3-303 99-385 (387)
79 PRK07682 hypothetical protein; 100.0 1.3E-26 2.9E-31 203.1 21.5 258 3-305 93-377 (378)
80 PLN00143 tyrosine/nicotianamin 100.0 4.6E-26 9.9E-31 201.1 25.0 255 5-304 112-404 (409)
81 PLN02450 1-aminocyclopropane-1 100.0 6.9E-26 1.5E-30 202.4 26.2 257 3-305 123-431 (468)
82 PRK12414 putative aminotransfe 100.0 4E-26 8.6E-31 200.2 24.1 243 3-288 102-369 (384)
83 TIGR01976 am_tr_V_VC1184 cyste 100.0 1.3E-26 2.9E-31 204.5 21.2 260 10-302 100-397 (397)
84 PLN00145 tyrosine/nicotianamin 100.0 5.8E-26 1.3E-30 201.2 24.9 257 3-303 129-423 (430)
85 PRK05764 aspartate aminotransf 100.0 7.3E-26 1.6E-30 199.5 25.1 256 3-304 103-391 (393)
86 PRK09276 LL-diaminopimelate am 100.0 5.3E-26 1.2E-30 199.7 24.2 247 6-298 109-379 (385)
87 TIGR03537 DapC succinyldiamino 100.0 5.6E-26 1.2E-30 197.0 23.8 238 5-287 75-334 (350)
88 PRK06348 aspartate aminotransf 99.9 1.1E-25 2.4E-30 197.4 24.8 252 3-299 101-377 (384)
89 cd06453 SufS_like Cysteine des 99.9 9E-26 1.9E-30 197.7 24.2 263 5-302 76-373 (373)
90 PRK07550 hypothetical protein; 99.9 3.7E-26 8E-31 200.8 21.2 252 3-299 102-382 (386)
91 PLN02656 tyrosine transaminase 99.9 9.5E-26 2.1E-30 199.2 23.8 256 3-303 108-402 (409)
92 PRK14807 histidinol-phosphate 99.9 2.2E-26 4.9E-31 199.4 19.1 246 6-302 92-350 (351)
93 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 7.2E-26 1.6E-30 197.5 22.1 251 5-305 81-369 (370)
94 TIGR02006 IscS cysteine desulf 99.9 5.3E-26 1.1E-30 200.6 21.4 262 11-303 89-372 (402)
95 PRK13355 bifunctional HTH-doma 99.9 1.1E-25 2.4E-30 204.1 24.0 255 5-304 223-514 (517)
96 PRK06225 aspartate aminotransf 99.9 6.9E-26 1.5E-30 198.6 21.7 257 6-305 99-377 (380)
97 PTZ00433 tyrosine aminotransfe 99.9 2.1E-25 4.5E-30 197.3 24.4 256 3-304 116-408 (412)
98 PRK02948 cysteine desulfurase; 99.9 1.5E-25 3.2E-30 196.7 23.3 266 12-303 86-369 (381)
99 PLN03026 histidinol-phosphate 99.9 3.2E-26 6.9E-31 200.2 18.9 245 6-300 119-378 (380)
100 PRK02731 histidinol-phosphate 99.9 2E-26 4.4E-31 201.2 17.7 248 7-304 101-366 (367)
101 PTZ00377 alanine aminotransfer 99.9 2.6E-26 5.5E-31 206.6 18.7 260 3-304 150-475 (481)
102 PRK04870 histidinol-phosphate 99.9 1.5E-26 3.3E-31 201.1 16.5 245 6-301 97-355 (356)
103 TIGR01264 tyr_amTase_E tyrosin 99.9 2.1E-25 4.6E-30 196.8 24.0 254 5-304 110-399 (401)
104 PRK09265 aminotransferase AlaT 99.9 2.7E-25 5.8E-30 196.3 24.6 258 5-305 110-402 (404)
105 TIGR01265 tyr_nico_aTase tyros 99.9 3.4E-25 7.4E-30 195.5 25.0 256 3-304 108-401 (403)
106 PRK07337 aminotransferase; Val 99.9 4.7E-25 1E-29 193.9 25.7 254 3-300 102-382 (388)
107 TIGR03538 DapC_gpp succinyldia 99.9 2.2E-25 4.8E-30 196.2 23.7 244 3-288 102-377 (393)
108 PRK03158 histidinol-phosphate 99.9 4E-26 8.6E-31 198.8 18.7 244 6-301 97-358 (359)
109 PRK08363 alanine aminotransfer 99.9 1.8E-25 4E-30 197.0 22.8 258 3-304 105-394 (398)
110 PRK07568 aspartate aminotransf 99.9 3.3E-25 7.1E-30 195.6 24.4 260 3-304 100-392 (397)
111 PRK07683 aminotransferase A; V 99.9 4.7E-25 1E-29 193.6 25.0 252 6-303 105-382 (387)
112 PRK04781 histidinol-phosphate 99.9 1.1E-25 2.3E-30 195.9 20.6 248 6-303 92-362 (364)
113 PRK06425 histidinol-phosphate 99.9 4.7E-26 1E-30 195.8 17.8 246 3-302 69-331 (332)
114 PRK08056 threonine-phosphate d 99.9 8.5E-26 1.8E-30 196.2 19.5 252 3-303 84-354 (356)
115 PRK06107 aspartate aminotransf 99.9 5E-25 1.1E-29 194.4 24.7 257 3-305 105-401 (402)
116 PRK08636 aspartate aminotransf 99.9 4.7E-25 1E-29 194.6 24.1 257 3-304 107-400 (403)
117 PF00266 Aminotran_5: Aminotra 99.9 1.4E-26 3E-31 202.5 14.2 255 11-298 85-371 (371)
118 PRK07309 aromatic amino acid a 99.9 7.3E-25 1.6E-29 192.7 25.0 258 3-305 103-389 (391)
119 PRK09082 methionine aminotrans 99.9 1.3E-25 2.9E-30 197.1 20.4 241 5-288 106-371 (386)
120 PRK01688 histidinol-phosphate 99.9 1.7E-26 3.8E-31 199.9 14.4 241 6-297 90-349 (351)
121 PRK00950 histidinol-phosphate 99.9 4.5E-26 9.7E-31 198.7 17.1 247 7-302 104-360 (361)
122 PRK07777 aminotransferase; Val 99.9 4.9E-25 1.1E-29 193.7 23.3 256 3-300 97-382 (387)
123 PRK08175 aminotransferase; Val 99.9 4.8E-25 1E-29 194.1 22.9 256 5-305 106-390 (395)
124 PRK06836 aspartate aminotransf 99.9 8.7E-25 1.9E-29 192.4 23.9 254 3-305 108-392 (394)
125 PRK05664 threonine-phosphate d 99.9 3.3E-25 7.2E-30 190.3 20.5 235 10-304 82-328 (330)
126 PRK02610 histidinol-phosphate 99.9 2.4E-25 5.3E-30 194.5 19.8 246 6-305 107-372 (374)
127 PRK06358 threonine-phosphate d 99.9 9.2E-25 2E-29 189.4 22.9 249 3-302 83-353 (354)
128 PRK01533 histidinol-phosphate 99.9 8.1E-26 1.8E-30 196.4 16.4 241 5-304 96-355 (366)
129 cd06451 AGAT_like Alanine-glyo 99.9 2.1E-25 4.6E-30 194.1 19.0 257 5-304 65-353 (356)
130 PRK09148 aminotransferase; Val 99.9 1.9E-24 4.2E-29 190.6 25.2 250 3-298 104-381 (405)
131 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 5.4E-25 1.2E-29 193.0 21.5 255 5-306 93-383 (387)
132 PLN02607 1-aminocyclopropane-1 99.9 2.1E-24 4.5E-29 191.5 25.2 257 3-304 132-437 (447)
133 PLN02376 1-aminocyclopropane-1 99.9 1.7E-24 3.7E-29 194.1 24.9 255 3-303 131-437 (496)
134 COG1168 MalY Bifunctional PLP- 99.9 5.6E-24 1.2E-28 175.4 25.2 259 3-305 95-387 (388)
135 PRK07590 L,L-diaminopimelate a 99.9 7.2E-25 1.6E-29 193.8 21.5 255 3-301 111-408 (409)
136 TIGR01141 hisC histidinol-phos 99.9 2.6E-25 5.6E-30 192.8 18.2 245 5-302 86-345 (346)
137 PRK06855 aminotransferase; Val 99.9 1.8E-24 4E-29 192.1 23.9 259 3-304 108-429 (433)
138 TIGR03542 DAPAT_plant LL-diami 99.9 1.2E-24 2.6E-29 192.0 22.4 254 3-300 107-400 (402)
139 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 1.1E-24 2.5E-29 189.6 21.8 132 5-142 74-220 (361)
140 PRK05387 histidinol-phosphate 99.9 9.8E-25 2.1E-29 189.7 20.9 248 3-303 89-352 (353)
141 PLN02409 serine--glyoxylate am 99.9 3.5E-25 7.5E-30 194.9 17.8 260 5-306 75-374 (401)
142 PRK08153 histidinol-phosphate 99.9 1.4E-24 3E-29 189.4 20.9 252 3-304 96-365 (369)
143 PRK08354 putative aminotransfe 99.9 1.7E-24 3.7E-29 184.5 20.9 239 3-301 66-309 (311)
144 PRK04635 histidinol-phosphate 99.9 3.6E-25 7.9E-30 192.1 16.7 244 3-300 89-351 (354)
145 TIGR01140 L_thr_O3P_dcar L-thr 99.9 7.4E-25 1.6E-29 188.3 18.3 244 2-302 75-329 (330)
146 PRK09105 putative aminotransfe 99.9 9.6E-25 2.1E-29 190.1 19.0 243 5-302 110-368 (370)
147 PRK03321 putative aminotransfe 99.9 3.7E-25 8.1E-30 192.1 15.9 243 6-304 90-351 (352)
148 TIGR01822 2am3keto_CoA 2-amino 99.9 4.9E-24 1.1E-28 188.0 23.1 254 5-305 113-390 (393)
149 TIGR03235 DNA_S_dndA cysteine 99.9 1.3E-24 2.7E-29 188.9 19.1 246 12-286 85-353 (353)
150 PRK05166 histidinol-phosphate 99.9 3.4E-24 7.3E-29 187.2 21.5 246 6-302 104-369 (371)
151 PRK05839 hypothetical protein; 99.9 7.2E-24 1.6E-28 185.2 22.9 239 12-302 107-372 (374)
152 PRK07392 threonine-phosphate d 99.9 2.4E-24 5.2E-29 187.5 19.6 250 3-303 86-358 (360)
153 PRK07865 N-succinyldiaminopime 99.9 7.2E-24 1.6E-28 184.8 22.4 234 3-288 98-350 (364)
154 PRK06959 putative threonine-ph 99.9 2.4E-24 5.1E-29 185.5 18.9 240 3-305 83-334 (339)
155 TIGR00858 bioF 8-amino-7-oxono 99.9 1.2E-23 2.6E-28 183.5 23.4 251 4-302 90-359 (360)
156 PRK14809 histidinol-phosphate 99.9 1.5E-24 3.3E-29 188.6 17.7 244 6-303 98-356 (357)
157 PRK14012 cysteine desulfurase; 99.9 4.9E-24 1.1E-28 188.3 21.0 126 11-140 91-222 (404)
158 PLN02231 alanine transaminase 99.9 2.7E-24 5.9E-29 193.9 19.2 259 3-304 203-527 (534)
159 cd06454 KBL_like KBL_like; thi 99.9 1.3E-23 2.7E-28 182.5 22.5 254 5-305 76-348 (349)
160 PRK13479 2-aminoethylphosphona 99.9 2.7E-24 5.9E-29 187.9 18.1 260 3-306 68-365 (368)
161 PRK06939 2-amino-3-ketobutyrat 99.9 2.2E-23 4.8E-28 184.1 23.9 255 5-306 117-395 (397)
162 TIGR03539 DapC_actino succinyl 99.9 2E-23 4.4E-28 181.4 22.7 227 9-288 99-344 (357)
163 PRK07179 hypothetical protein; 99.9 2.7E-23 6E-28 183.7 23.8 253 5-306 129-400 (407)
164 COG0156 BioF 7-keto-8-aminopel 99.9 2.5E-23 5.5E-28 177.6 22.2 257 1-305 110-387 (388)
165 PRK03317 histidinol-phosphate 99.9 3.4E-24 7.4E-29 187.1 17.3 245 3-303 100-363 (368)
166 TIGR02326 transamin_PhnW 2-ami 99.9 5.5E-24 1.2E-28 185.6 18.5 257 3-302 66-360 (363)
167 PF00155 Aminotran_1_2: Aminot 99.9 8E-24 1.7E-28 184.7 19.4 245 3-297 80-362 (363)
168 PRK03967 histidinol-phosphate 99.9 2.2E-24 4.8E-29 185.8 15.6 231 13-306 93-336 (337)
169 cd00609 AAT_like Aspartate ami 99.9 7.6E-23 1.7E-27 177.5 25.0 257 2-303 70-349 (350)
170 PLN02483 serine palmitoyltrans 99.9 3.1E-23 6.7E-28 185.9 22.6 255 5-306 176-468 (489)
171 PLN02721 threonine aldolase 99.9 3.2E-23 7E-28 180.2 22.1 253 4-304 69-352 (353)
172 PRK05958 8-amino-7-oxononanoat 99.9 8.2E-23 1.8E-27 179.8 24.6 252 5-304 114-383 (385)
173 TIGR01814 kynureninase kynuren 99.9 8.2E-24 1.8E-28 186.9 17.7 129 7-137 103-247 (406)
174 PRK07908 hypothetical protein; 99.9 3.1E-23 6.7E-28 179.8 20.4 245 3-304 87-347 (349)
175 PRK14808 histidinol-phosphate 99.9 1.1E-23 2.3E-28 181.2 15.9 228 15-300 97-333 (335)
176 PLN02672 methionine S-methyltr 99.9 7.4E-23 1.6E-27 193.2 22.5 253 5-303 769-1079(1082)
177 TIGR03801 asp_4_decarbox aspar 99.9 5.7E-23 1.2E-27 182.9 20.6 127 10-139 180-327 (521)
178 PTZ00376 aspartate aminotransf 99.9 1.3E-22 2.7E-27 179.2 22.6 122 9-135 119-264 (404)
179 PRK09275 aspartate aminotransf 99.9 5.2E-23 1.1E-27 183.4 20.1 127 10-139 186-328 (527)
180 KOG0257 Kynurenine aminotransf 99.9 2.1E-23 4.5E-28 173.7 16.1 184 3-192 105-326 (420)
181 PRK09440 avtA valine--pyruvate 99.9 1.7E-22 3.8E-27 179.2 23.0 258 13-304 125-411 (416)
182 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 7.9E-23 1.7E-27 177.9 20.3 255 5-303 65-352 (355)
183 COG0075 Serine-pyruvate aminot 99.9 3.1E-22 6.6E-27 169.5 22.6 263 2-306 67-365 (383)
184 TIGR02379 ECA_wecE TDP-4-keto- 99.9 3.2E-22 6.9E-27 174.0 23.2 232 2-251 57-321 (376)
185 PRK08637 hypothetical protein; 99.9 5.3E-22 1.2E-26 174.4 24.8 253 6-305 85-387 (388)
186 TIGR01825 gly_Cac_T_rel pyrido 99.9 2.9E-22 6.3E-27 176.2 22.7 255 4-306 107-383 (385)
187 PLN02397 aspartate transaminas 99.9 4.7E-22 1E-26 176.1 23.7 125 6-135 134-282 (423)
188 TIGR03576 pyridox_MJ0158 pyrid 99.9 7.5E-22 1.6E-26 169.7 23.9 242 5-302 86-345 (346)
189 PLN02724 Molybdenum cofactor s 99.9 5.7E-23 1.2E-27 194.3 18.2 280 11-304 119-484 (805)
190 PRK13392 5-aminolevulinate syn 99.9 4.2E-22 9.2E-27 176.3 22.5 254 5-306 121-399 (410)
191 COG0399 WecE Predicted pyridox 99.9 2.1E-22 4.5E-27 170.7 19.4 274 2-304 60-373 (374)
192 PLN03227 serine palmitoyltrans 99.9 9.3E-22 2E-26 172.3 23.8 267 2-303 70-381 (392)
193 PRK09257 aromatic amino acid a 99.9 9.6E-22 2.1E-26 173.3 23.5 121 11-136 117-260 (396)
194 cd00616 AHBA_syn 3-amino-5-hyd 99.9 6.2E-22 1.3E-26 172.1 22.0 271 5-303 48-352 (352)
195 TIGR01437 selA_rel uncharacter 99.9 5.9E-22 1.3E-26 171.9 21.1 137 2-142 71-227 (363)
196 KOG1549 Cysteine desulfurase N 99.9 9.5E-23 2.1E-27 171.9 15.0 123 12-138 125-257 (428)
197 KOG0259 Tyrosine aminotransfer 99.9 1.5E-21 3.2E-26 160.2 20.6 257 3-303 138-432 (447)
198 TIGR03588 PseC UDP-4-keto-6-de 99.9 3.5E-21 7.6E-26 168.8 24.3 273 2-303 55-377 (380)
199 KOG0633 Histidinol phosphate a 99.9 7.9E-22 1.7E-26 154.1 17.6 253 6-302 102-375 (375)
200 PRK09064 5-aminolevulinate syn 99.9 3.1E-21 6.6E-26 170.8 22.7 254 5-306 121-399 (407)
201 TIGR01821 5aminolev_synth 5-am 99.9 2.8E-21 6.1E-26 170.7 22.4 254 5-306 120-398 (402)
202 PLN02368 alanine transaminase 99.9 2.9E-21 6.3E-26 169.3 21.4 160 5-169 145-340 (407)
203 PLN02822 serine palmitoyltrans 99.9 5.8E-21 1.3E-25 170.9 23.7 257 4-304 183-477 (481)
204 PRK13393 5-aminolevulinate syn 99.9 5.2E-21 1.1E-25 169.1 23.2 254 5-306 120-398 (406)
205 PRK13520 L-tyrosine decarboxyl 99.9 4.1E-21 8.8E-26 168.2 21.7 238 12-302 102-369 (371)
206 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 1.6E-20 3.5E-25 164.0 25.3 269 10-302 67-374 (375)
207 cd00613 GDC-P Glycine cleavage 99.9 6.4E-21 1.4E-25 168.5 23.0 131 9-141 101-243 (398)
208 cd06450 DOPA_deC_like DOPA dec 99.9 2.4E-22 5.1E-27 174.3 13.4 225 14-304 95-344 (345)
209 cd00378 SHMT Serine-glycine hy 99.9 9.8E-21 2.1E-25 167.4 23.7 260 5-304 96-385 (402)
210 TIGR03812 tyr_de_CO2_Arch tyro 99.9 5.8E-21 1.2E-25 167.3 21.9 240 12-304 104-372 (373)
211 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1.6E-20 3.5E-25 164.1 24.2 274 2-302 59-377 (379)
212 KOG0634 Aromatic amino acid am 99.9 1.8E-20 3.9E-25 156.4 22.5 269 5-303 139-465 (472)
213 TIGR00474 selA seryl-tRNA(sec) 99.9 4.1E-21 9E-26 169.1 18.7 188 1-192 147-371 (454)
214 PF01041 DegT_DnrJ_EryC1: DegT 99.9 4.8E-21 1.1E-25 166.6 19.0 275 2-302 51-362 (363)
215 cd06502 TA_like Low-specificit 99.9 1.4E-20 2.9E-25 162.8 21.4 248 5-304 62-337 (338)
216 PRK05937 8-amino-7-oxononanoat 99.9 6.8E-21 1.5E-25 166.2 19.5 246 5-305 86-351 (370)
217 COG1103 Archaea-specific pyrid 99.9 1.3E-20 2.9E-25 148.0 18.5 253 5-305 91-381 (382)
218 PLN02955 8-amino-7-oxononanoat 99.9 2.2E-20 4.8E-25 163.3 20.4 242 12-303 198-456 (476)
219 PRK04311 selenocysteine syntha 99.9 6.5E-21 1.4E-25 168.3 17.0 188 2-193 153-377 (464)
220 PRK00011 glyA serine hydroxyme 99.9 5.9E-20 1.3E-24 163.1 22.0 259 5-304 102-389 (416)
221 PRK04366 glycine dehydrogenase 99.9 1.6E-20 3.5E-25 168.4 18.3 127 10-141 153-294 (481)
222 PRK13580 serine hydroxymethylt 99.9 1.3E-19 2.8E-24 158.7 21.4 251 14-304 166-445 (493)
223 PRK00451 glycine dehydrogenase 99.9 2.6E-20 5.7E-25 166.7 17.6 134 5-143 144-289 (447)
224 PRK15407 lipopolysaccharide bi 99.9 6.7E-19 1.4E-23 155.8 25.2 265 11-303 108-435 (438)
225 PTZ00094 serine hydroxymethylt 99.8 2.3E-20 5E-25 166.6 15.9 258 5-303 115-407 (452)
226 KOG0256 1-aminocyclopropane-1- 99.8 1E-18 2.2E-23 145.0 23.4 259 6-303 162-460 (471)
227 PRK13034 serine hydroxymethylt 99.8 5.3E-19 1.1E-23 156.0 21.5 259 2-303 101-391 (416)
228 TIGR01788 Glu-decarb-GAD gluta 99.8 2.6E-19 5.7E-24 157.3 19.3 249 15-305 139-430 (431)
229 PRK03080 phosphoserine aminotr 99.8 5.7E-20 1.2E-24 160.6 14.9 126 3-143 79-214 (378)
230 PRK13238 tnaA tryptophanase/L- 99.8 1.4E-18 3.1E-23 154.3 22.5 265 3-303 105-432 (460)
231 cd00615 Orn_deC_like Ornithine 99.8 8.5E-20 1.8E-24 154.3 12.9 128 5-139 90-236 (294)
232 PRK03244 argD acetylornithine 99.8 7.5E-19 1.6E-23 155.1 17.2 244 13-305 126-395 (398)
233 PRK05355 3-phosphoserine/phosp 99.8 3.6E-19 7.8E-24 154.0 14.8 249 2-303 78-353 (360)
234 TIGR01364 serC_1 phosphoserine 99.8 3.6E-19 7.7E-24 153.3 14.4 250 2-304 67-344 (349)
235 PRK10534 L-threonine aldolase; 99.8 2.2E-18 4.7E-23 148.7 19.0 242 5-303 64-332 (333)
236 PLN02414 glycine dehydrogenase 99.8 2.4E-18 5.2E-23 162.5 19.4 131 5-139 602-750 (993)
237 KOG2862 Alanine-glyoxylate ami 99.8 3.5E-18 7.6E-23 137.0 16.6 263 2-305 79-383 (385)
238 PRK01278 argD acetylornithine 99.8 3.9E-18 8.4E-23 150.1 18.1 249 11-304 113-388 (389)
239 PRK00854 rocD ornithine--oxo-a 99.8 2.7E-17 5.8E-22 145.4 22.3 241 15-302 133-399 (401)
240 cd00617 Tnase_like Tryptophana 99.8 4.4E-17 9.5E-22 143.0 22.8 183 2-192 79-310 (431)
241 PLN02271 serine hydroxymethylt 99.8 7.2E-17 1.6E-21 142.2 23.0 185 2-192 226-454 (586)
242 PRK07505 hypothetical protein; 99.8 4.8E-17 1E-21 143.7 22.0 225 38-304 157-399 (402)
243 TIGR00707 argD acetylornithine 99.8 1.4E-17 3E-22 146.3 18.3 242 13-303 114-376 (379)
244 PRK02769 histidine decarboxyla 99.8 2.7E-17 5.8E-22 142.7 19.7 174 11-191 107-310 (380)
245 cd00611 PSAT_like Phosphoserin 99.8 2.3E-18 5E-23 149.3 12.8 249 3-305 75-353 (355)
246 PRK02627 acetylornithine amino 99.8 8.7E-18 1.9E-22 148.4 16.2 244 15-304 128-394 (396)
247 PLN03226 serine hydroxymethylt 99.8 7.2E-17 1.6E-21 143.8 21.8 259 2-303 112-418 (475)
248 cd00610 OAT_like Acetyl ornith 99.8 1.6E-17 3.5E-22 147.5 17.7 248 12-303 120-410 (413)
249 PRK04073 rocD ornithine--oxo-a 99.8 3.9E-17 8.5E-22 143.9 18.5 212 42-302 168-395 (396)
250 KOG1360 5-aminolevulinate synt 99.8 5.8E-17 1.3E-21 134.2 17.0 244 12-303 255-519 (570)
251 TIGR01366 serC_3 phosphoserine 99.8 6.8E-18 1.5E-22 146.3 12.2 254 5-303 75-355 (361)
252 TIGR03531 selenium_SpcS O-phos 99.8 8E-17 1.7E-21 141.0 18.5 174 13-192 150-344 (444)
253 PRK05093 argD bifunctional N-s 99.7 1.6E-16 3.4E-21 140.4 19.3 221 40-304 164-400 (403)
254 PLN03032 serine decarboxylase; 99.7 2.3E-16 5E-21 135.9 18.5 174 12-192 109-314 (374)
255 PTZ00125 ornithine aminotransf 99.7 1.5E-16 3.2E-21 140.7 17.4 248 13-305 121-396 (400)
256 cd01494 AAT_I Aspartate aminot 99.7 7.5E-17 1.6E-21 125.2 13.1 129 3-137 29-170 (170)
257 PRK02936 argD acetylornithine 99.7 4.1E-16 8.9E-21 136.8 19.2 241 14-301 112-376 (377)
258 PRK05367 glycine dehydrogenase 99.7 2.9E-16 6.3E-21 149.2 18.0 175 12-192 584-793 (954)
259 PLN02880 tyrosine decarboxylas 99.7 6E-16 1.3E-20 138.6 18.1 173 16-194 183-401 (490)
260 COG4992 ArgD Ornithine/acetylo 99.7 9E-17 2E-21 135.3 11.1 219 41-305 165-399 (404)
261 PF00464 SHMT: Serine hydroxym 99.7 3.3E-15 7.2E-20 128.4 20.6 223 2-248 98-359 (399)
262 TIGR03246 arg_catab_astC succi 99.7 1.6E-15 3.5E-20 133.5 18.4 220 41-304 160-395 (397)
263 PRK12566 glycine dehydrogenase 99.7 1.3E-15 2.9E-20 141.8 18.4 118 14-137 591-718 (954)
264 TIGR03799 NOD_PanD_pyr putativ 99.7 2.9E-15 6.4E-20 134.5 19.8 176 14-195 209-422 (522)
265 COG0112 GlyA Glycine/serine hy 99.7 7.3E-15 1.6E-19 122.3 20.2 184 2-192 100-303 (413)
266 TIGR00461 gcvP glycine dehydro 99.7 1.3E-15 2.9E-20 142.5 17.8 172 13-192 577-785 (939)
267 PLN02590 probable tyrosine dec 99.7 4E-15 8.6E-20 133.5 19.7 174 16-195 231-450 (539)
268 KOG1368 Threonine aldolase [Am 99.7 2.7E-15 5.9E-20 119.9 16.3 250 1-298 82-362 (384)
269 PRK05367 glycine dehydrogenase 99.7 2.4E-15 5.2E-20 143.0 18.7 128 5-141 153-289 (954)
270 KOG1359 Glycine C-acetyltransf 99.7 3.7E-16 8E-21 124.6 10.7 252 4-303 141-407 (417)
271 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 8.4E-16 1.8E-20 132.6 13.0 178 4-191 96-316 (417)
272 PRK12381 bifunctional succinyl 99.7 8.3E-15 1.8E-19 129.4 18.3 247 13-304 127-399 (406)
273 COG0076 GadB Glutamate decarbo 99.7 2.6E-15 5.6E-20 132.5 14.7 172 16-193 159-362 (460)
274 PLN02414 glycine dehydrogenase 99.7 1.4E-14 3.1E-19 137.3 20.4 127 5-140 180-316 (993)
275 PRK04260 acetylornithine amino 99.6 1.4E-14 3.1E-19 126.9 18.4 244 12-303 108-372 (375)
276 PLN00144 acetylornithine trans 99.6 6.4E-15 1.4E-19 128.8 14.7 221 42-305 148-381 (382)
277 COG3844 Kynureninase [Amino ac 99.6 3.2E-14 6.9E-19 115.3 17.2 252 12-305 117-403 (407)
278 PLN02624 ornithine-delta-amino 99.6 1.2E-14 2.6E-19 130.3 14.9 218 42-303 203-443 (474)
279 TIGR00713 hemL glutamate-1-sem 99.6 2E-14 4.4E-19 127.9 16.0 245 13-305 129-423 (423)
280 COG2008 GLY1 Threonine aldolas 99.6 1.7E-13 3.6E-18 113.5 19.5 253 1-304 61-339 (342)
281 TIGR01885 Orn_aminotrans ornit 99.6 6E-14 1.3E-18 124.0 18.2 241 14-302 128-400 (401)
282 COG3977 Alanine-alpha-ketoisov 99.6 5.5E-14 1.2E-18 112.7 15.5 219 49-304 170-411 (417)
283 PLN02263 serine decarboxylase 99.6 4.6E-13 1E-17 117.5 21.9 173 13-192 177-381 (470)
284 PRK15029 arginine decarboxylas 99.6 2.9E-14 6.4E-19 131.7 14.2 130 3-139 234-402 (755)
285 KOG1357 Serine palmitoyltransf 99.6 7.8E-15 1.7E-19 123.5 9.3 250 8-304 215-498 (519)
286 PRK08088 4-aminobutyrate amino 99.6 1.2E-13 2.5E-18 122.9 16.2 214 50-305 184-424 (425)
287 PF12897 Aminotran_MocR: Alani 99.6 3.8E-13 8.2E-18 112.1 18.0 247 15-299 125-410 (425)
288 PRK04612 argD acetylornithine 99.6 5.9E-14 1.3E-18 123.5 13.9 246 15-304 132-403 (408)
289 TIGR01365 serC_2 phosphoserine 99.6 2.9E-13 6.2E-18 116.9 17.2 223 2-252 69-340 (374)
290 PRK03715 argD acetylornithine 99.5 2.2E-13 4.8E-18 119.6 15.4 213 45-305 164-394 (395)
291 PLN02452 phosphoserine transam 99.5 1.5E-13 3.2E-18 118.6 13.9 249 3-304 83-363 (365)
292 TIGR02618 tyr_phenol_ly tyrosi 99.5 1.6E-12 3.6E-17 112.8 20.1 183 2-192 97-328 (450)
293 PRK13237 tyrosine phenol-lyase 99.5 2.1E-12 4.5E-17 112.5 20.3 182 3-192 105-335 (460)
294 TIGR00700 GABAtrnsam 4-aminobu 99.5 7.5E-14 1.6E-18 123.8 11.5 212 50-303 182-419 (420)
295 PRK08117 4-aminobutyrate amino 99.5 3.9E-13 8.5E-18 119.8 15.7 216 49-305 191-430 (433)
296 TIGR02407 ectoine_ectB diamino 99.5 3.6E-13 7.8E-18 119.0 15.3 214 49-303 177-411 (412)
297 PRK11522 putrescine--2-oxoglut 99.5 6.2E-13 1.3E-17 118.5 15.7 220 42-305 207-452 (459)
298 PF04864 Alliinase_C: Allinase 99.5 7.7E-14 1.7E-18 114.6 8.9 247 15-300 97-361 (363)
299 PRK09792 4-aminobutyrate trans 99.5 1.8E-13 3.9E-18 121.2 11.9 214 50-303 183-420 (421)
300 PRK13578 ornithine decarboxyla 99.5 7.6E-13 1.6E-17 121.3 15.3 129 3-139 203-371 (720)
301 PRK05964 adenosylmethionine--8 99.5 4.5E-12 9.8E-17 112.7 19.8 247 14-305 134-423 (423)
302 COG0160 GabT 4-aminobutyrate a 99.5 4.6E-13 1E-17 116.2 13.0 206 59-305 221-446 (447)
303 TIGR03372 putres_am_tran putre 99.5 2.3E-12 4.9E-17 114.2 17.3 249 14-303 163-439 (442)
304 COG0403 GcvP Glycine cleavage 99.5 2E-11 4.2E-16 103.0 20.9 134 4-141 151-294 (450)
305 PRK07495 4-aminobutyrate amino 99.5 2.3E-12 4.9E-17 114.1 16.3 216 50-305 183-422 (425)
306 PF00282 Pyridoxal_deC: Pyrido 99.5 4.5E-13 9.7E-18 116.3 11.4 174 16-195 143-357 (373)
307 PRK08360 4-aminobutyrate amino 99.5 1.2E-12 2.5E-17 116.5 14.2 208 51-304 190-426 (443)
308 PRK06777 4-aminobutyrate amino 99.5 4.6E-13 1E-17 118.6 11.6 210 50-303 183-420 (421)
309 TIGR00461 gcvP glycine dehydro 99.5 8.5E-12 1.8E-16 117.4 19.5 120 13-141 152-277 (939)
310 PRK00062 glutamate-1-semialdeh 99.5 4.4E-12 9.5E-17 112.7 16.8 249 13-305 131-425 (426)
311 PRK09264 diaminobutyrate--2-ox 99.4 6.4E-12 1.4E-16 111.6 17.6 213 49-304 181-416 (425)
312 PF02347 GDC-P: Glycine cleava 99.4 1.4E-11 3E-16 106.7 17.8 236 13-302 153-429 (429)
313 PF03841 SelA: L-seryl-tRNA se 99.4 4.5E-13 9.7E-18 112.2 8.3 141 2-146 73-234 (367)
314 PRK06918 4-aminobutyrate amino 99.4 1.2E-12 2.7E-17 117.0 11.6 205 59-304 218-443 (451)
315 PRK12462 phosphoserine aminotr 99.4 2.6E-11 5.6E-16 103.8 19.0 245 5-302 83-360 (364)
316 PF06838 Met_gamma_lyase: Meth 99.4 4.2E-11 9.1E-16 99.5 18.5 145 3-147 84-248 (403)
317 PRK04013 argD acetylornithine/ 99.4 2.5E-11 5.5E-16 105.0 17.3 234 14-304 107-360 (364)
318 PRK15399 lysine decarboxylase 99.4 1.4E-10 2.9E-15 106.6 21.5 136 3-148 224-392 (713)
319 COG0001 HemL Glutamate-1-semia 99.4 1.5E-11 3.2E-16 105.2 14.2 232 3-252 125-401 (432)
320 PRK06058 4-aminobutyrate amino 99.4 5.6E-12 1.2E-16 112.5 12.2 209 53-304 211-442 (443)
321 COG1921 SelA Selenocysteine sy 99.4 9.2E-12 2E-16 105.3 12.5 123 11-141 103-240 (395)
322 PRK08593 4-aminobutyrate amino 99.4 1.9E-11 4.2E-16 108.9 14.9 202 59-304 206-429 (445)
323 PF01212 Beta_elim_lyase: Beta 99.3 5.3E-13 1.1E-17 111.5 3.9 188 2-193 56-271 (290)
324 COG1448 TyrB Aspartate/tyrosin 99.3 6E-11 1.3E-15 99.0 15.3 123 9-136 115-260 (396)
325 COG1982 LdcC Arginine/lysine/o 99.3 1.2E-10 2.6E-15 102.9 16.4 128 4-138 100-247 (557)
326 TIGR00709 dat 2,4-diaminobutyr 99.3 4.4E-11 9.6E-16 106.6 13.9 202 59-304 205-435 (442)
327 COG1003 GcvP Glycine cleavage 99.3 2.2E-11 4.8E-16 102.8 10.1 110 14-128 157-274 (496)
328 PRK05630 adenosylmethionine--8 99.3 6.4E-11 1.4E-15 104.8 13.5 207 51-304 191-420 (422)
329 PRK06541 hypothetical protein; 99.3 8.5E-11 1.8E-15 105.1 14.2 209 51-304 208-455 (460)
330 PLN02760 4-aminobutyrate:pyruv 99.3 3.1E-11 6.8E-16 108.7 11.1 211 51-304 247-491 (504)
331 PRK15400 lysine decarboxylase 99.3 5.7E-11 1.2E-15 109.1 12.5 128 3-139 224-383 (714)
332 KOG1402 Ornithine aminotransfe 99.3 3.6E-10 7.7E-15 92.2 15.2 218 42-303 188-426 (427)
333 PRK07986 adenosylmethionine--8 99.3 1E-10 2.3E-15 103.5 13.1 208 49-304 190-423 (428)
334 PRK05769 4-aminobutyrate amino 99.2 5.9E-11 1.3E-15 105.7 11.4 200 59-304 220-439 (441)
335 KOG1383 Glutamate decarboxylas 99.2 7E-11 1.5E-15 100.6 11.1 164 28-193 180-374 (491)
336 PRK09221 beta alanine--pyruvat 99.2 2.4E-10 5.1E-15 101.9 14.2 208 51-305 205-444 (445)
337 PRK06062 hypothetical protein; 99.2 5.4E-11 1.2E-15 106.2 10.1 209 50-305 200-446 (451)
338 TIGR03811 tyr_de_CO2_Ent tyros 99.2 5.2E-09 1.1E-13 95.5 22.8 171 16-192 224-475 (608)
339 PRK13360 omega amino acid--pyr 99.2 1.5E-10 3.2E-15 103.1 12.7 210 50-305 201-441 (442)
340 PRK12403 putative aminotransfe 99.2 5.3E-10 1.1E-14 100.1 15.8 208 51-305 209-453 (460)
341 PRK07678 aminotransferase; Val 99.2 1.4E-10 3E-15 103.6 11.9 216 53-305 202-450 (451)
342 KOG0258 Alanine aminotransfera 99.2 3.2E-10 6.9E-15 94.4 12.8 130 3-136 148-311 (475)
343 PRK05965 hypothetical protein; 99.2 2.2E-10 4.9E-15 102.4 12.7 209 51-304 202-447 (459)
344 PRK06173 adenosylmethionine--8 99.2 4.5E-10 9.8E-15 99.6 14.5 206 50-304 193-425 (429)
345 PRK05639 4-aminobutyrate amino 99.2 1.5E-10 3.2E-15 103.4 11.3 201 59-304 221-443 (457)
346 PRK06938 diaminobutyrate--2-ox 99.2 1.4E-10 3E-15 103.7 10.1 211 50-304 215-460 (464)
347 PRK00615 glutamate-1-semialdeh 99.2 2.5E-10 5.3E-15 101.2 11.5 218 43-305 181-429 (433)
348 PRK06105 aminotransferase; Pro 99.2 3.7E-10 8E-15 101.1 12.6 211 51-304 205-449 (460)
349 PRK08297 L-lysine aminotransfe 99.2 1.6E-10 3.4E-15 103.0 9.9 209 50-305 212-442 (443)
350 PRK12566 glycine dehydrogenase 99.2 2.9E-09 6.2E-14 100.2 18.4 117 14-141 168-291 (954)
351 PRK12389 glutamate-1-semialdeh 99.2 1.8E-09 4E-14 96.0 16.5 217 41-305 178-428 (428)
352 PRK07482 hypothetical protein; 99.2 2.5E-10 5.3E-15 102.2 10.6 212 50-304 206-454 (461)
353 PRK06943 adenosylmethionine--8 99.1 3.4E-10 7.3E-15 101.1 11.1 209 50-305 208-447 (453)
354 PRK06149 hypothetical protein; 99.1 5.4E-10 1.2E-14 108.6 13.3 204 59-304 743-970 (972)
355 TIGR00508 bioA adenosylmethion 99.1 1E-09 2.3E-14 97.4 14.0 207 49-303 193-425 (427)
356 PF05889 SLA_LP_auto_ag: Solub 99.1 4.8E-10 1E-14 95.0 11.0 129 12-146 99-246 (389)
357 PRK07481 hypothetical protein; 99.1 9.3E-10 2E-14 98.3 13.3 203 59-306 212-447 (449)
358 TIGR00699 GABAtrns_euk 4-amino 99.1 2.1E-10 4.6E-15 102.0 8.5 207 50-303 238-461 (464)
359 KOG2467 Glycine/serine hydroxy 99.1 2.2E-08 4.8E-13 83.0 19.4 184 2-193 118-341 (477)
360 PLN02482 glutamate-1-semialdeh 99.1 1.1E-09 2.4E-14 98.0 12.9 221 42-305 225-474 (474)
361 TIGR03251 LAT_fam L-lysine 6-t 99.1 2.4E-09 5.2E-14 95.3 14.9 206 50-304 205-430 (431)
362 PRK07046 aminotransferase; Val 99.1 2E-09 4.3E-14 96.1 14.2 99 42-145 199-306 (453)
363 PRK07030 adenosylmethionine--8 99.1 7.7E-10 1.7E-14 99.1 11.1 210 50-305 201-447 (466)
364 PRK08742 adenosylmethionine--8 99.1 6.8E-10 1.5E-14 99.4 10.5 209 50-304 223-467 (472)
365 PRK06082 4-aminobutyrate amino 99.1 6.2E-10 1.3E-14 99.6 9.5 208 51-304 218-451 (459)
366 PRK06148 hypothetical protein; 99.1 1.1E-09 2.5E-14 106.5 11.8 207 59-305 783-1011(1013)
367 KOG1358 Serine palmitoyltransf 99.1 2E-09 4.3E-14 89.9 11.4 125 5-137 169-316 (467)
368 COG4100 Cystathionine beta-lya 99.1 5.5E-09 1.2E-13 84.4 13.4 142 3-144 95-256 (416)
369 PRK06917 hypothetical protein; 99.1 1.6E-09 3.4E-14 96.7 11.5 216 50-304 185-437 (447)
370 COG0161 BioA Adenosylmethionin 99.1 5.2E-10 1.1E-14 97.0 8.0 217 50-304 200-443 (449)
371 PRK07480 putative aminotransfe 99.0 2.4E-09 5.1E-14 95.8 11.7 207 51-305 206-449 (456)
372 PRK07483 hypothetical protein; 99.0 1.3E-09 2.7E-14 97.2 9.9 217 51-304 186-437 (443)
373 PRK07036 hypothetical protein; 99.0 1.8E-09 3.8E-14 96.8 10.4 202 59-304 219-452 (466)
374 PRK06931 diaminobutyrate--2-ox 99.0 1.4E-09 3E-14 97.4 9.6 203 59-304 224-454 (459)
375 KOG1404 Alanine-glyoxylate ami 99.0 2.3E-08 4.9E-13 83.7 15.6 179 59-252 211-407 (442)
376 PRK06916 adenosylmethionine--8 99.0 1.8E-09 3.9E-14 96.7 10.0 209 50-305 210-456 (460)
377 KOG2040 Glycine dehydrogenase 98.9 5.5E-08 1.2E-12 86.3 16.1 188 2-195 613-839 (1001)
378 TIGR02617 tnaA_trp_ase tryptop 98.9 4E-08 8.7E-13 85.2 14.5 185 5-192 104-344 (467)
379 KOG0628 Aromatic-L-amino-acid/ 98.9 1.1E-08 2.4E-13 87.2 8.3 203 17-242 185-427 (511)
380 KOG3846 L-kynurenine hydrolase 98.8 9.2E-08 2E-12 77.7 11.9 132 6-137 144-292 (465)
381 KOG0629 Glutamate decarboxylas 98.8 5.1E-08 1.1E-12 82.5 10.2 172 18-195 201-416 (510)
382 PLN02974 adenosylmethionine-8- 98.8 2.6E-07 5.7E-12 87.4 16.1 178 59-249 583-787 (817)
383 PRK06209 glutamate-1-semialdeh 98.8 1.2E-07 2.6E-12 84.5 13.1 95 42-139 166-267 (431)
384 KOG1412 Aspartate aminotransfe 98.8 1.6E-06 3.4E-11 70.8 17.9 250 13-306 124-407 (410)
385 KOG1405 4-aminobutyrate aminot 98.8 1.3E-07 2.9E-12 78.2 11.3 206 49-304 254-483 (484)
386 KOG1411 Aspartate aminotransfe 98.6 2.6E-06 5.7E-11 70.4 14.0 132 5-141 137-294 (427)
387 PF00202 Aminotran_3: Aminotra 98.4 1E-06 2.2E-11 76.1 8.5 155 13-172 107-294 (339)
388 KOG1401 Acetylornithine aminot 98.4 7.5E-06 1.6E-10 69.4 11.8 126 42-170 185-324 (433)
389 KOG2040 Glycine dehydrogenase 98.3 1.6E-05 3.5E-10 71.1 12.5 125 5-137 195-326 (1001)
390 COG3033 TnaA Tryptophanase [Am 98.0 0.00022 4.8E-09 59.8 13.4 122 13-140 122-284 (471)
391 COG1932 SerC Phosphoserine ami 97.8 0.00021 4.7E-09 60.1 10.3 198 59-304 143-363 (365)
392 KOG1403 Predicted alanine-glyo 97.7 9.6E-05 2.1E-09 60.4 6.5 204 60-303 209-436 (452)
393 KOG3843 Predicted serine hydro 96.2 0.0044 9.5E-08 50.0 3.2 97 37-136 122-237 (432)
394 PF02310 B12-binding: B12 bind 86.9 1.6 3.4E-05 31.3 4.8 88 28-117 17-110 (121)
395 PF05368 NmrA: NmrA-like famil 80.0 6.8 0.00015 31.7 6.4 85 6-95 14-99 (233)
396 cd02067 B12-binding B12 bindin 79.0 14 0.0003 26.3 7.1 88 29-118 17-109 (119)
397 COG1066 Sms Predicted ATP-depe 76.7 18 0.00039 32.0 8.0 83 10-95 117-215 (456)
398 COG0296 GlgB 1,4-alpha-glucan 75.9 3.2 7E-05 38.8 3.6 34 68-101 205-238 (628)
399 cd02068 radical_SAM_B12_BD B12 74.1 17 0.00036 26.3 6.4 68 33-103 10-81 (127)
400 CHL00200 trpA tryptophan synth 72.8 25 0.00053 29.3 7.8 80 15-95 121-207 (263)
401 PF07085 DRTGG: DRTGG domain; 72.0 19 0.00042 24.9 6.1 50 40-95 41-90 (105)
402 COG0108 RibB 3,4-dihydroxy-2-b 71.1 10 0.00023 29.7 4.8 43 52-95 148-190 (203)
403 PRK05678 succinyl-CoA syntheta 70.9 19 0.0004 30.5 6.7 73 20-99 50-125 (291)
404 COG1377 FlhB Flagellar biosynt 70.2 7.1 0.00015 33.8 4.1 57 13-98 261-317 (363)
405 COG0159 TrpA Tryptophan syntha 69.9 30 0.00064 28.8 7.4 74 15-89 124-203 (265)
406 TIGR02026 BchE magnesium-proto 69.9 24 0.00052 32.5 7.8 70 31-103 28-105 (497)
407 COG1954 GlpP Glycerol-3-phosph 69.7 11 0.00024 28.7 4.6 49 49-102 12-62 (181)
408 PF00290 Trp_syntA: Tryptophan 68.4 31 0.00068 28.6 7.4 80 15-95 117-203 (259)
409 TIGR01019 sucCoAalpha succinyl 68.3 20 0.00042 30.3 6.3 75 18-99 46-123 (286)
410 KOG2790 Phosphoserine aminotra 68.2 24 0.00051 29.6 6.4 78 58-143 146-224 (370)
411 PF10087 DUF2325: Uncharacteri 64.3 38 0.00083 23.1 6.2 63 30-96 14-81 (97)
412 cd08071 MPN_DUF2466 Mov34/MPN/ 63.9 15 0.00032 26.1 4.2 43 51-94 50-99 (113)
413 PRK13396 3-deoxy-7-phosphohept 62.3 53 0.0011 28.7 7.9 55 49-103 220-284 (352)
414 PRK04296 thymidine kinase; Pro 61.0 30 0.00066 27.1 5.9 90 5-97 21-113 (190)
415 PRK09722 allulose-6-phosphate 60.9 50 0.0011 26.9 7.2 86 33-119 102-198 (229)
416 smart00642 Aamy Alpha-amylase 60.6 11 0.00024 28.8 3.3 31 70-100 63-93 (166)
417 PRK08091 ribulose-phosphate 3- 60.6 65 0.0014 26.2 7.7 85 33-118 110-207 (228)
418 PRK03673 hypothetical protein; 60.4 17 0.00036 32.3 4.7 85 10-98 6-95 (396)
419 KOG2741 Dimeric dihydrodiol de 60.1 27 0.00058 30.1 5.6 65 33-100 66-132 (351)
420 PRK13397 3-deoxy-7-phosphohept 60.0 70 0.0015 26.4 7.9 55 49-103 134-197 (250)
421 TIGR00262 trpA tryptophan synt 59.6 47 0.001 27.5 7.0 9 33-41 134-142 (256)
422 PLN02591 tryptophan synthase 59.6 52 0.0011 27.2 7.2 80 15-95 108-194 (250)
423 PRK13125 trpA tryptophan synth 59.3 37 0.00081 27.8 6.4 9 33-41 123-131 (244)
424 PF00926 DHBP_synthase: 3,4-di 58.6 28 0.0006 27.5 5.1 42 53-95 145-186 (194)
425 PLN00191 enolase 58.3 81 0.0018 28.7 8.7 86 9-96 306-394 (457)
426 PF08423 Rad51: Rad51; InterP 58.2 28 0.0006 28.9 5.5 82 14-95 72-183 (256)
427 PRK08883 ribulose-phosphate 3- 58.0 57 0.0012 26.4 7.0 85 33-118 100-195 (220)
428 PRK14057 epimerase; Provisiona 57.3 63 0.0014 26.7 7.2 76 42-118 137-221 (254)
429 TIGR00608 radc DNA repair prot 57.0 22 0.00048 28.7 4.5 43 51-94 150-199 (218)
430 COG2984 ABC-type uncharacteriz 56.5 58 0.0013 27.8 7.0 82 15-99 160-248 (322)
431 TIGR01501 MthylAspMutase methy 56.4 44 0.00094 24.6 5.6 67 23-91 13-81 (134)
432 cd04795 SIS SIS domain. SIS (S 56.4 53 0.0011 21.3 6.8 56 35-94 20-78 (87)
433 cd00758 MoCF_BD MoCF_BD: molyb 56.3 38 0.00082 24.7 5.4 60 12-72 6-70 (133)
434 COG3959 Transketolase, N-termi 56.1 19 0.00041 29.0 3.8 38 31-68 197-240 (243)
435 smart00852 MoCF_biosynth Proba 55.8 38 0.00082 24.7 5.4 59 13-71 5-68 (135)
436 PF04002 RadC: RadC-like JAB d 55.5 20 0.00042 25.9 3.7 45 49-94 52-104 (123)
437 PRK09354 recA recombinase A; P 55.0 64 0.0014 28.1 7.2 17 79-95 176-192 (349)
438 COG2099 CobK Precorrin-6x redu 54.8 27 0.00059 28.7 4.6 23 77-99 53-75 (257)
439 PRK09441 cytoplasmic alpha-amy 54.7 14 0.00031 33.8 3.5 31 69-99 73-103 (479)
440 TIGR02012 tigrfam_recA protein 54.0 57 0.0012 28.1 6.7 25 228-252 262-286 (321)
441 cd02072 Glm_B12_BD B12 binding 54.0 54 0.0012 23.9 5.7 69 28-98 16-89 (128)
442 PRK13566 anthranilate synthase 53.7 59 0.0013 31.5 7.4 78 12-94 524-602 (720)
443 COG1058 CinA Predicted nucleot 53.7 33 0.00071 28.4 5.0 85 10-98 6-95 (255)
444 COG1105 FruK Fructose-1-phosph 53.3 1E+02 0.0022 26.4 8.0 36 63-99 132-168 (310)
445 cd01393 recA_like RecA is a b 53.2 1.2E+02 0.0025 24.3 8.4 37 59-95 113-164 (226)
446 PF00128 Alpha-amylase: Alpha 53.0 13 0.00028 31.3 2.9 32 69-100 44-75 (316)
447 PTZ00187 succinyl-CoA syntheta 52.8 48 0.001 28.5 6.0 73 20-99 73-149 (317)
448 PF02603 Hpr_kinase_N: HPr Ser 52.6 27 0.00059 25.3 4.1 39 51-95 72-110 (127)
449 PRK00024 hypothetical protein; 52.6 24 0.00052 28.6 4.1 43 51-94 156-205 (224)
450 cd00885 cinA Competence-damage 52.4 39 0.00084 26.0 5.1 83 12-98 6-93 (170)
451 TIGR02402 trehalose_TreZ malto 52.4 16 0.00035 34.0 3.5 28 73-100 156-183 (542)
452 TIGR00177 molyb_syn molybdenum 52.2 29 0.00064 25.7 4.3 48 25-72 26-78 (144)
453 PF00834 Ribul_P_3_epim: Ribul 52.1 35 0.00077 27.1 4.9 84 33-118 99-194 (201)
454 COG2861 Uncharacterized protei 52.1 25 0.00054 28.6 4.0 50 49-101 104-162 (250)
455 PRK00014 ribB 3,4-dihydroxy-2- 51.7 42 0.0009 27.2 5.2 34 60-94 172-205 (230)
456 cd01121 Sms Sms (bacterial rad 51.5 93 0.002 27.5 7.9 51 45-95 142-205 (372)
457 PRK12723 flagellar biosynthesi 50.7 84 0.0018 27.9 7.5 86 13-100 205-298 (388)
458 COG0352 ThiE Thiamine monophos 50.4 38 0.00082 27.2 4.8 86 50-137 24-113 (211)
459 TIGR00506 ribB 3,4-dihydroxy-2 50.3 47 0.001 26.3 5.2 34 60-94 157-190 (199)
460 PLN02274 inosine-5'-monophosph 50.3 99 0.0021 28.6 8.1 109 8-116 254-378 (505)
461 PF14258 DUF4350: Domain of un 50.2 62 0.0013 20.3 5.9 61 31-96 10-70 (70)
462 cd04726 KGPDC_HPS 3-Keto-L-gul 50.2 99 0.0022 24.2 7.4 83 33-116 97-184 (202)
463 cd02071 MM_CoA_mut_B12_BD meth 49.8 71 0.0015 22.8 5.9 67 29-97 17-88 (122)
464 PRK06559 nicotinate-nucleotide 49.3 34 0.00073 28.9 4.6 96 14-119 167-270 (290)
465 PRK08745 ribulose-phosphate 3- 49.1 1.1E+02 0.0025 24.7 7.5 85 33-118 104-199 (223)
466 PRK12595 bifunctional 3-deoxy- 49.0 1E+02 0.0022 27.1 7.6 70 33-102 219-299 (360)
467 TIGR02104 pulA_typeI pullulana 48.6 17 0.00036 34.5 3.0 29 72-100 224-252 (605)
468 PF13407 Peripla_BP_4: Peripla 48.6 35 0.00075 27.8 4.7 62 29-95 18-85 (257)
469 TIGR00789 flhB_rel flhB C-term 48.4 18 0.00039 24.0 2.3 23 78-100 28-50 (82)
470 PLN03244 alpha-amylase; Provis 48.3 22 0.00047 34.5 3.6 33 68-100 432-464 (872)
471 TIGR01060 eno phosphopyruvate 48.1 1.1E+02 0.0025 27.5 8.0 84 10-95 274-362 (425)
472 PTZ00314 inosine-5'-monophosph 48.1 85 0.0018 29.0 7.3 110 7-116 246-371 (495)
473 cd03313 enolase Enolase: Enola 47.9 1E+02 0.0022 27.6 7.7 85 9-95 272-361 (408)
474 PF00117 GATase: Glutamine ami 47.8 97 0.0021 24.0 6.9 68 25-94 7-76 (192)
475 PRK05601 DNA polymerase III su 47.7 23 0.0005 31.0 3.4 56 38-100 296-364 (377)
476 cd01017 AdcA Metal binding pro 47.6 69 0.0015 26.9 6.3 68 13-94 170-247 (282)
477 PRK00910 ribB 3,4-dihydroxy-2- 47.6 54 0.0012 26.4 5.2 34 60-94 168-201 (218)
478 COG0365 Acs Acyl-coenzyme A sy 47.6 86 0.0019 29.2 7.2 81 13-96 64-146 (528)
479 PTZ00081 enolase; Provisional 47.5 1.1E+02 0.0024 27.7 7.8 84 10-95 293-381 (439)
480 KOG0630 Predicted pyridoxal-de 47.5 54 0.0012 29.9 5.6 79 16-97 233-330 (838)
481 PRK01792 ribB 3,4-dihydroxy-2- 47.2 55 0.0012 26.3 5.2 35 60-95 167-201 (214)
482 COG0552 FtsY Signal recognitio 47.1 49 0.0011 28.5 5.2 93 10-102 163-272 (340)
483 TIGR00640 acid_CoA_mut_C methy 47.1 1.1E+02 0.0023 22.5 6.4 71 23-95 14-89 (132)
484 PLN02654 acetate-CoA ligase 46.6 1.1E+02 0.0025 29.3 8.3 75 10-85 141-217 (666)
485 PF00994 MoCF_biosynth: Probab 46.3 17 0.00036 27.0 2.2 59 14-73 6-69 (144)
486 PF13460 NAD_binding_10: NADH( 45.4 1.3E+02 0.0029 22.8 7.5 78 5-91 13-90 (183)
487 TIGR02238 recomb_DMC1 meiotic 45.4 1.2E+02 0.0027 25.9 7.5 16 80-95 226-241 (313)
488 cd05013 SIS_RpiR RpiR-like pro 45.3 1.1E+02 0.0024 21.8 7.8 78 14-95 13-92 (139)
489 cd05008 SIS_GlmS_GlmD_1 SIS (S 45.3 52 0.0011 23.4 4.7 34 57-94 44-77 (126)
490 PRK13111 trpA tryptophan synth 45.0 1.3E+02 0.0029 24.9 7.4 39 33-71 111-153 (258)
491 PF02571 CbiJ: Precorrin-6x re 45.0 25 0.00055 29.0 3.2 27 74-100 50-76 (249)
492 cd01018 ZntC Metal binding pro 44.7 93 0.002 25.9 6.6 69 13-95 169-245 (266)
493 PF03652 UPF0081: Uncharacteri 44.7 63 0.0014 23.8 4.9 54 48-101 38-99 (135)
494 PF04309 G3P_antiterm: Glycero 44.6 17 0.00037 28.1 2.0 49 49-102 8-58 (175)
495 PF04016 DUF364: Domain of unk 43.6 1E+02 0.0022 23.0 6.0 96 11-119 8-117 (147)
496 TIGR02717 AcCoA-syn-alpha acet 43.4 95 0.0021 28.2 6.9 63 38-100 65-131 (447)
497 PLN00125 Succinyl-CoA ligase [ 43.3 88 0.0019 26.7 6.2 81 11-99 43-130 (300)
498 cd00983 recA RecA is a bacter 43.3 26 0.00057 30.2 3.1 24 229-252 263-286 (325)
499 cd04736 MDH_FMN Mandelate dehy 43.2 1.1E+02 0.0023 27.0 6.8 70 33-102 230-301 (361)
500 PRK06512 thiamine-phosphate py 42.6 61 0.0013 26.2 5.0 49 50-98 29-79 (221)
No 1
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.8e-48 Score=337.29 Aligned_cols=305 Identities=41% Similarity=0.654 Sum_probs=280.5
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++++++++||+|+++.+.|++....+.......|++++.++..|+++++++++++|++|++++|+||||.+.|+
T Consensus 78 ~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl 157 (388)
T PRK08861 78 TSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAALDAALAKKPKLILLETPSNPLVRVVDI 157 (388)
T ss_pred HHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCcccCH
Confidence 3566 455568899999999999998777666566667889999999889999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|.++|+++|+++|+|++|+.+....+...|+|+++.|++||++|+.++++|+++++++.+.+.+.......|..++++
T Consensus 158 ~~I~~la~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~ 237 (388)
T PRK08861 158 AELCQKAKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPF 237 (388)
T ss_pred HHHHHHHHHcCCEEEEECCccccccCCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChH
Confidence 99999999999999999999998877777889999999999999999989999999887777777777777888999999
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-CHHHHHHHHh
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVE 238 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 238 (307)
.+|+..++++++..|++++.+++..+.++|+.++.+.+++||+++++|++.++.++..+.+++++|.++ +.+.+.+|++
T Consensus 238 ~a~l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~ 317 (388)
T PRK08861 238 DSYMTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVK 317 (388)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999888888999999995 5677899999
Q ss_pred cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
.|+...+.+++|+..++.++|...+|..++.+.+...|..++.||+|+|+||.|.+++.|.++|+++
T Consensus 318 ~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE~~~dli~Dl~~al~~~ 384 (388)
T PRK08861 318 ALALFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGLEDAQDLIADLDQAFAKA 384 (388)
T ss_pred cCCcceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999764
No 2
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-48 Score=327.14 Aligned_cols=305 Identities=51% Similarity=0.829 Sum_probs=287.4
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC-CCceEEEEeCCCCCcccccc
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~ 78 (307)
|||+ .++++++++||+|++++..|++.+..+....+++|+++.+++..+.+++++++. ++|++|++++|+||+..+.|
T Consensus 88 maAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~D 167 (396)
T COG0626 88 MAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPSNPLLEVPD 167 (396)
T ss_pred HHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHHHHHhcccCceEEEEeCCCCccccccc
Confidence 7888 457889999999999999999999999999999999999999988888888887 59999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH-hcCCCCC
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEGSGLA 157 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~-~~~~~~~ 157 (307)
+++|+++|+++|+.+++|++.+.|.+..+.++|+|+++.|.+|+++|+..+.+|+++++++.+.+.+....+ ..|..++
T Consensus 168 I~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~ 247 (396)
T COG0626 168 IPAIARLAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLS 247 (396)
T ss_pred HHHHHHHHHhcCCEEEEECCcccccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999888888888887755555 5889999
Q ss_pred hhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHH
Q 021783 158 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVV 237 (307)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (307)
+..+|+.+++++++..|++++.+|++.+.++|+.++.+.+++||+++++|+++++.++..+.|++++|.+.+.+.+.+|+
T Consensus 248 p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~ 327 (396)
T COG0626 248 PFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFL 327 (396)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998778999999997745699999
Q ss_pred hcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 238 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 238 ~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
+.|+...+..++|+..++.++|..++|..++...+...|..++.||+|+|+||++.+++.|.++|+++
T Consensus 328 ~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGlEd~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 328 DSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGLEDVEDLIADLEQALAKA 395 (396)
T ss_pred HhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999864
No 3
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=1.5e-47 Score=332.70 Aligned_cols=306 Identities=74% Similarity=1.146 Sum_probs=280.5
Q ss_pred CcHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 1 MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 1 ~aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
|+|+.+++.++++||+|+++++.|+++...+...++..|+++++++..|++++++++++++++|++++|+||+|.+.|++
T Consensus 72 ~~al~~~l~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le~~i~~~tklv~le~psnptg~v~dl~ 151 (378)
T TIGR01329 72 MAALDVITRLLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVKAALGPKTKLVLLESPTNPLQKIVDIR 151 (378)
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCcCceEEEEECCCCCCCeeecHH
Confidence 35665555678999999999999998887777777889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhh
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 160 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (307)
+|.++|+++|+++|+|++|+.+....+..+|+|++++|++|+++|+.++++|+++++++.+.+.+.......+...++..
T Consensus 152 ~I~~la~~~g~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~ 231 (378)
T TIGR01329 152 KISEMAHAQNALVVVDNTMMSPLLCNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFD 231 (378)
T ss_pred HHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHH
Confidence 99999999999999999998887666667799999999999999988889999999877776666666665677788889
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcC
Q 021783 161 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT 240 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (307)
+++...+++.+..|+++..+++..+.++|+.++.+.++.+|+++++|+++++.++..+.+++++|.+.+.+.+.++.+.|
T Consensus 232 a~l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L 311 (378)
T TIGR01329 232 CWLLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEAT 311 (378)
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999998877778899999998777789999999
Q ss_pred CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcCC
Q 021783 241 KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 306 (307)
Q Consensus 241 ~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~~ 306 (307)
+..++.++.|+..++.++|...+|..++.+.+...|..++.||+|+|+||.+.+++.|.++|++++
T Consensus 312 ~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~~ 377 (378)
T TIGR01329 312 KLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIEDVDDLISDLDIAFVTAP 377 (378)
T ss_pred cCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999998888999999999999999999999999999998875
No 4
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=6.4e-47 Score=328.76 Aligned_cols=305 Identities=41% Similarity=0.629 Sum_probs=277.4
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.++++|||+|++++|+|+++...+.......|+++..++..|++++++.+++++++|++++|+||||.+.|+
T Consensus 77 ~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di 156 (386)
T PRK08045 77 MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDI 156 (386)
T ss_pred HHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHHHHhcccCCeEEEEECCCCCCCEecCH
Confidence 3466 445568899999999999998877777666666778888888789999999999899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|.++|+++|+++|+|++|+.+....+..+++|+++.|++|+++|++++++|+++++++.+.+.+.......+...++.
T Consensus 157 ~~I~~ia~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~ 236 (386)
T PRK08045 157 AKICHLAREAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAF 236 (386)
T ss_pred HHHHHHHHHcCCEEEEECCCCccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHH
Confidence 99999999999999999999988777677789999999999999999999999998876767777777777778889999
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-CHHHHHHHHh
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVE 238 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 238 (307)
.+|++.++++.+..|++++.+|+..+.++|+.++.+.+++||+++++|+++++.++.++.|++++|.++ +.+.+.+|++
T Consensus 237 ~~~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~ 316 (386)
T PRK08045 237 DSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLG 316 (386)
T ss_pred HHHHHHhhhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998888888999999995 4566789999
Q ss_pred cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
.|+...+.+++|+..++.++|...+|..++.+.+...|.+++.||+|+|+||.+.+++.|.++|+++
T Consensus 317 ~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 383 (386)
T PRK08045 317 GLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_pred hccceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999988899999999999999999999999999999864
No 5
>PLN02509 cystathionine beta-lyase
Probab=100.00 E-value=6.5e-47 Score=332.50 Aligned_cols=306 Identities=86% Similarity=1.297 Sum_probs=281.2
Q ss_pred CcHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 1 MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 1 ~aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
|+|+.++..++++||+|+++++.|+++...+...+...|++++.++..|+++++++++++|++|++++|+||+|.+.|++
T Consensus 158 ~aAi~~il~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~ 237 (464)
T PLN02509 158 MAALSAVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVAAAIGPQTKLVWLESPTNPRQQISDIR 237 (464)
T ss_pred HHHHHHHHHHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHH
Confidence 45676666788999999999999998887776667789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhh
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 160 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (307)
+|.++|+++|+++|+|++|+.+....+...|+|++++|++|+++|+.++.+|+++++++.+.+.+...+...+..+++..
T Consensus 238 ~I~~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~ 317 (464)
T PLN02509 238 KIAEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFD 317 (464)
T ss_pred HHHHHHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHH
Confidence 99999999999999999999888776677899999999999999888888999998877666666666666677789999
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcC
Q 021783 161 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT 240 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (307)
+|+...+++.+..|++++.++++.+.++|+.++.+.+++||+|.++|++.++.++.++.|++++|.+.+.+.+..|++.|
T Consensus 318 A~l~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~~~~~~f~~~l 397 (464)
T PLN02509 318 CWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETT 397 (464)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999888888999999998788889999999
Q ss_pred CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcCC
Q 021783 241 KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 306 (307)
Q Consensus 241 ~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~~ 306 (307)
+...+.+++|+..++.++|...+|..++.+.+...|.+++.||+|+|+||.+.+++.|.++|+.-+
T Consensus 398 ~l~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGlE~~~DLi~Dl~~Al~~~~ 463 (464)
T PLN02509 398 KYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFRTGP 463 (464)
T ss_pred CcceEcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHcccC
Confidence 999999999999999999999999999999999999999999999999999999999999998654
No 6
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=100.00 E-value=6e-47 Score=325.71 Aligned_cols=303 Identities=49% Similarity=0.806 Sum_probs=270.9
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|||+ +++++++++||+|++++..|.+....+...+...|+++.+++..|+++++++++++|++|++++|.||+..+.|+
T Consensus 80 maAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl 159 (386)
T PF01053_consen 80 MAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEALEAALRPNTKLVFLESPSNPTLEVPDL 159 (386)
T ss_dssp HHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHHHHHHCTTEEEEEEESSBTTTTB---H
T ss_pred HHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHHHhhccccceEEEEEcCCCcccccccH
Confidence 6888 777889999999999999999999999888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcC-CEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcC-hhHHHHHHHHHHhcCCCCC
Q 021783 80 RKIAEMAHAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKG-ERLAKELYFLQNAEGSGLA 157 (307)
Q Consensus 80 ~~l~~~~~~~~-~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~ 157 (307)
++|+++|+++| +++++|++.+.+...++..+|+|+++.|.+|+++|...+.+|++++++ ..+.+.+.......|..++
T Consensus 160 ~~i~~~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~ 239 (386)
T PF01053_consen 160 EAIAKLAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLS 239 (386)
T ss_dssp HHHHHHHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--
T ss_pred HHHHHHHHHhCCceEEeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccch
Confidence 99999999998 999999999999888999999999999999999999999999999987 5677777778888899999
Q ss_pred hhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHH-HHHHH
Q 021783 158 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA-LSKHV 236 (307)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 236 (307)
+..+|+..++++++..|++++.+|++++.++|+.++.+.++.+|+++++|+++++.++.++.+++++|.+++.. .+..|
T Consensus 240 p~da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f 319 (386)
T PF01053_consen 240 PFDAWLLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRF 319 (386)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHH
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhH
Confidence 99999999999999999999999999999999999999999999999999999999998888899999998775 89999
Q ss_pred HhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 237 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 237 ~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
++.|+...+.+++|+..++.++|...+|..++.+.+...|..++.||+|+|+||.+.+++.|.++|+
T Consensus 320 ~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 320 LDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGLEDPDDLIADLEQALE 386 (386)
T ss_dssp HHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS-HHHHHHHHHHHHH
T ss_pred HhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEeccCCHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999985
No 7
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=100.00 E-value=1.2e-46 Score=326.67 Aligned_cols=306 Identities=45% Similarity=0.752 Sum_probs=281.9
Q ss_pred CcHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 1 MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 1 ~aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
|+|+.+++++++|||+|+++++.|++....+...+...|+++++++..|++++++++++++++|++++|+||+|.+.|++
T Consensus 75 ~~Al~~~l~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~ 154 (380)
T PRK06176 75 LAGIHAVFSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLA 154 (380)
T ss_pred HHHHHHHHHHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHHHhcCcCceEEEEECCCCCCceecCHH
Confidence 46776666788999999999999998887787788899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhh
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 160 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (307)
+|.++|+++|+++|+|++|+.+....+..+|+|++++|++|+++|+..+.+|+++.+++.+.+.+...+...+..+++..
T Consensus 155 ~I~~la~~~gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~ 234 (380)
T PRK06176 155 QCASVAKDHGLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQD 234 (380)
T ss_pred HHHHHHHHcCCEEEEECCccccccCCccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHH
Confidence 99999999999999999999877666667899999999999998888788999998877777777777777777788889
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcC
Q 021783 161 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT 240 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (307)
+|+...+++.+..|++++.+++.++.++++.++.+..+++|++.++|++.++.++.++.+++++|.+++.+.+.+|++.|
T Consensus 235 ~~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l 314 (380)
T PRK06176 235 SWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESL 314 (380)
T ss_pred HHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999998887788999999998778889999999
Q ss_pred CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcCC
Q 021783 241 KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 306 (307)
Q Consensus 241 ~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~~ 306 (307)
+...+.+++|+..++.++|...+|..++.+.+...|..++.||+|+|+||.+.+++.|.++|++.+
T Consensus 315 ~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~Al~~~~ 380 (380)
T PRK06176 315 KLFILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKIG 380 (380)
T ss_pred CcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999999999999999999999998753
No 8
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=100.00 E-value=1.4e-46 Score=326.57 Aligned_cols=304 Identities=42% Similarity=0.696 Sum_probs=277.8
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.+++++||+|+++.|+|+++...+....+..|+++..++..|+++++++++++|++|++++|+||||.+.|+
T Consensus 76 ~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl 155 (382)
T TIGR02080 76 MSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQKPKLVLIETPSNPLLRVVDI 155 (382)
T ss_pred HHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCEecCH
Confidence 3566 455568899999999999998888777666777788999888889999999999899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|.++|+++|+++++|++|+.+....+...|+|++++|++|+++|++++++|+++.+++.+.+.+.......+..+++.
T Consensus 156 ~~I~~la~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~ 235 (382)
T TIGR02080 156 AKICHLAKAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAF 235 (382)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHH
Confidence 99999999999999999999988766666678999999999999989999999999987778777777777778889999
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-CHHHHHHHHh
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVE 238 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 238 (307)
.+|+.+++++.+..|++++.+|+..+.++|+.++.+..++||++.++|+++++.++..+.+++++|.++ +.+.+.+|++
T Consensus 236 ~a~l~lr~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~ 315 (382)
T TIGR02080 236 DSYLTLRGLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLG 315 (382)
T ss_pred HHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998888888999999995 4666789999
Q ss_pred cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 304 (307)
.|+...+.+++|+..++.++|...+|..++.+.+...|..++.||+|+|+||.+.+++.|.++|++
T Consensus 316 ~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 316 GLSLFTLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGLEDADDLIADLEQGLRA 381 (382)
T ss_pred cCCcceEeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999998889999999999999999999999999999975
No 9
>PRK07671 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=2.9e-46 Score=324.27 Aligned_cols=303 Identities=49% Similarity=0.823 Sum_probs=278.9
Q ss_pred CcHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 1 MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 1 ~aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
|+|+.+++.+++|||+|+++++.|++.+..+...++..|++++.++..|+++++++++++|++|++++|+||+|.+.|++
T Consensus 75 ~aai~~~~~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~ 154 (377)
T PRK07671 75 MAAITAVMMLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEVEEAIRPNTKAIYVETPTNPLLKITDIK 154 (377)
T ss_pred HHHHHHHHHHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHH
Confidence 45665666788999999999999987877666777889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhh
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 160 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (307)
+|.++|+++|+++|+|++|+.+....+..+++|+++.|++|+++|+.++.+|+++++++.+.+.+...+...+..+++..
T Consensus 155 ~I~~la~~~g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~ 234 (377)
T PRK07671 155 KISTIAKEKGLLTIVDNTFMTPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQD 234 (377)
T ss_pred HHHHHHHHcCCEEEEECCCCccccCChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHH
Confidence 99999999999999999998776666667799999999999998888778999988877787778878878888899999
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcC
Q 021783 161 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT 240 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (307)
+|+..++++.+..|++++.+|++.+.++|+.++.+..+++|++.++|++.++.++..+.|++++|.+.+.+.+..|++.+
T Consensus 235 a~l~~~~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l 314 (377)
T PRK07671 235 SWLLLRGLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGSEETANKVLERL 314 (377)
T ss_pred HHHHHcCcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999998888788999999998878899999999
Q ss_pred CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 241 KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 241 ~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
+...+.+++|...++.++|...+|..++.+.+...|..++.||+|+|+||.+.+++.|.++|+
T Consensus 315 ~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 377 (377)
T PRK07671 315 QYFTLAESLGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVGIEDGEDLIEDLAQALA 377 (377)
T ss_pred CcceEccCCCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 999999999999999999999999999998888999999999999999999999999999874
No 10
>PRK08064 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=4.1e-46 Score=324.97 Aligned_cols=305 Identities=46% Similarity=0.782 Sum_probs=278.0
Q ss_pred CcHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 1 MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 1 ~aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
|+|+.+++.++++||+|+++++.|++++..+...++..|++++.++..|+++++++++++|++|++++|+||||.+.|++
T Consensus 79 ~~ai~~~l~~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~ 158 (390)
T PRK08064 79 MAAISTAFLLLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEVAQNIKPNTKLFYVETPSNPLLKVTDIR 158 (390)
T ss_pred HHHHHHHHHHhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCcEeccHH
Confidence 45664444478999999999999998888887778889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhh
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 160 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (307)
+|.++|+++|+++|+|++|+.+....+.++|+|+++.|+||+++|++|+++|+++++++.+.+.+.......+...++..
T Consensus 159 ~I~~la~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~ 238 (390)
T PRK08064 159 GVVKLAKAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQD 238 (390)
T ss_pred HHHHHHHHcCCEEEEECCCCcccccCchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHH
Confidence 99999999999999999999887655567799999999999999998888999999877777777777777777788889
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcC
Q 021783 161 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT 240 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (307)
+++...+++.+..|++++.+++..+.++|+.++.+.++++++++++|++.++.++.++.+++++|.+++.+.+..|++.+
T Consensus 239 a~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l 318 (390)
T PRK08064 239 CWLVLRGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHV 318 (390)
T ss_pred HHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999998888888999999998888889999999
Q ss_pred CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 241 KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 241 ~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
+...+.+++|+.+++.++|...+|...+.+.+...|.+++.+|+|+|+||.+++++.|.++|+++
T Consensus 319 ~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 319 KLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred CcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 98888999999999999999899999998888888999999999999999999999999999764
No 11
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=4.6e-46 Score=325.08 Aligned_cols=305 Identities=40% Similarity=0.677 Sum_probs=276.6
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.++++|||+|+++.|.|++....+...++..|.+++.++..|++++++.++++|++|++++|+||||.+.|+
T Consensus 85 ~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl 164 (405)
T PRK08776 85 MGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSLADALAQSPKLVLIETPSNPLLRITDL 164 (405)
T ss_pred HHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCccCCH
Confidence 3566 455568899999999999999877666677778899999999989999999998899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|.++|+++|+++|+|++|+.+....+..+|+|+++.|.+|+++|++++.+|+++.+++.+.+.+.......+..++++
T Consensus 165 ~~I~~la~~~gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~ 244 (405)
T PRK08776 165 RFVIEAAHKVGALTVVDNTFLSPALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPF 244 (405)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHH
Confidence 99999999999999999999987765666789999999999999888888899998887777777766666666678899
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-CHHHHHHHHh
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVE 238 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 238 (307)
.+++...+++.+..|++++.+|+..+.++|+.++.+..+.+|+++++|+++++.++.++.|++++|.++ +.+.+.+|++
T Consensus 245 ~a~l~~~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~ 324 (405)
T PRK08776 245 DAFLTLRGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVD 324 (405)
T ss_pred HHHHHHhhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998888888999999994 5666789999
Q ss_pred cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
.|+...+.+++|+..++.++|...+|..++.+.+...|..++.||+|+|+||.|.+++.|.++|+++
T Consensus 325 ~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~~ 391 (405)
T PRK08776 325 GLRYFTLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGIESAEDLLIDLRAGLARA 391 (405)
T ss_pred hCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999998899999999999999999999999999999764
No 12
>PRK09028 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=8.2e-46 Score=320.29 Aligned_cols=299 Identities=29% Similarity=0.502 Sum_probs=265.0
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .+++++++|||+|+++++.|+++...+....+.+|+++..++..+.+++++.++++|++|++++|+||+|.+.|+
T Consensus 86 ~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~~~l~~~TklV~lespsNPtg~v~dl 165 (394)
T PRK09028 86 AAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIRELIRPNTKVLFLESPGSITMEVQDV 165 (394)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCcHHHH
Confidence 4566 456678999999999999998888666556678999999998878889999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|+++||++|+++++|++|+.+....+.++|+|+++.|.+||++|++++++|+++.+ +...+.+.......|..+++.
T Consensus 166 ~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~-~~~~~~l~~~~~~~G~~~~p~ 244 (394)
T PRK09028 166 PTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTATAN-EKHWDQLREHSYLMGQCTSPD 244 (394)
T ss_pred HHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEEECC-HHHHHHHHHHHHhcCCCCCHH
Confidence 9999999999999999999999887788899999999999999999999999987655 444454555566678899999
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC--CHHHHHHHH
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--SLALSKHVV 237 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 237 (307)
.+|+..++++++..|++++.+++..+.++|+.++.+.+++||+++++|+++++.++.++.+++++|.++ +.+.+.+|+
T Consensus 245 ~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~ 324 (394)
T PRK09028 245 DVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALV 324 (394)
T ss_pred HHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999888788999999996 466789999
Q ss_pred hcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 021783 238 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 238 ~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 304 (307)
+.|+...+.+++|+..++..+|...++... ....+..++.||+|+|+||.+.+++.|.++|++
T Consensus 325 ~~l~l~~~~~slG~~~sLv~~p~~~~~~~~----~~~~~~~~~liR~svGlEd~~dLi~Dl~~Al~~ 387 (394)
T PRK09028 325 EGMQHFKMGFSWGGFESLILGVFGINKLRT----ATNWDFSKPLIRLHIGLEDVDDLIADLEAGFER 387 (394)
T ss_pred HhCCcceEecccCCCcceeECCCCcCccCc----hhhhcCCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence 999999999999999999988866554432 233666678999999999999999999999975
No 13
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=100.00 E-value=1e-45 Score=323.12 Aligned_cols=304 Identities=35% Similarity=0.604 Sum_probs=274.8
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
+|+ .++.++++|||+|+++++.|+++...+...++..|++++.++..|+++++++++++|++|++++|+||+|.+.|++
T Consensus 91 ~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~ 170 (398)
T PRK07504 91 AAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIA 170 (398)
T ss_pred HHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCcEecCHH
Confidence 455 4455678999999999999998877766667789999999998899999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhh
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 160 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (307)
+|.++|+++|+++|+|++|+.+....+...|+|+++.|++|+++|++...+|+++.+++.+.+.+.......+..+++..
T Consensus 171 ~I~~la~~~gi~lvvD~a~a~~~~~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~ 250 (398)
T PRK07504 171 AVAKIANQAGAKLVVDNVFATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFN 250 (398)
T ss_pred HHHHHHHHcCCEEEEECCccccccCCchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHH
Confidence 99999999999999999999887766777899999999999997765455788888877666556555666778899999
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-CHHHHHHHHhc
Q 021783 161 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVET 239 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 239 (307)
+++...+++.+..|++++.++++.+.++|+.++.+.+++||++.++|+++++.++.++.+++++|.++ +.+.+..|++.
T Consensus 251 A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~ 330 (398)
T PRK07504 251 AWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNA 330 (398)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999998888788999999994 56778899999
Q ss_pred CCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 240 TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 240 l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
|+...+.+++|+..++.++|...+|..++.+.+...|.+++.||+|+|+||.+.+++.|.++|+++
T Consensus 331 l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 396 (398)
T PRK07504 331 LKIVRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGLEDTDDLIEDLAAALKKV 396 (398)
T ss_pred CCcceecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999865
No 14
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.4e-45 Score=323.77 Aligned_cols=305 Identities=40% Similarity=0.658 Sum_probs=270.2
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.+++++||+|+++++.|++....+...++..|+++++++..|++++++++++++++|++++|+||||.+.|+
T Consensus 89 ~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l~~ai~~~tklV~l~sp~NPtG~v~di 168 (431)
T PRK08248 89 QAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENFEAAITDKTKALFAETIGNPKGDVLDI 168 (431)
T ss_pred HHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCH
Confidence 3566 466678899999999999999888777777889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhH------------------
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL------------------ 141 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~------------------ 141 (307)
++|.++|+++|+++|+|++++.+....+.++|+|+++.|++|+++|+....+|+++.+.+..
T Consensus 169 ~~I~~la~~~gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (431)
T PRK08248 169 EAVAAIAHEHGIPLIVDNTFASPYLLRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYH 248 (431)
T ss_pred HHHHHHHHHcCCEEEEeCCCCccccCChhHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccc
Confidence 99999999999999999999987766666789999999999999776556667666543210
Q ss_pred --------------HHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCC
Q 021783 142 --------------AKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 207 (307)
Q Consensus 142 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~ 207 (307)
...........|..+++..+|+..++++++..|++++.+++..+.++|+.++.+..++||++.++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p 328 (431)
T PRK08248 249 GLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHP 328 (431)
T ss_pred cchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCc
Confidence 111223445567889999999999999999999999999999999999999999999999999999
Q ss_pred chHHHhhhc-cCCCceEEEEe-CCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEE
Q 021783 208 GHELHYSQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 285 (307)
Q Consensus 208 ~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis 285 (307)
++.+..++. ++.|++++|.+ ++.+.+..|++.|+...+.+++|+..++.++|...+|..++.+.+...|..++.||+|
T Consensus 329 ~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRls 408 (431)
T PRK08248 329 SYELAKKYLPKGQGAILTFGIKGGVEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLS 408 (431)
T ss_pred cHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEE
Confidence 999998765 56789999999 4567788999999999999999999999999999999999999999999999999999
Q ss_pred eccCChHHHHHHHHHHHhcC
Q 021783 286 VGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 286 ~~~~~~~~~i~~l~~~l~~~ 305 (307)
+|+||.+.+++.|.++|+++
T Consensus 409 vGlEd~~dL~~Dl~~Al~~~ 428 (431)
T PRK08248 409 VGTEAIDDILDDLRQAIRQS 428 (431)
T ss_pred eccCCHHHHHHHHHHHHHhh
Confidence 99999999999999999865
No 15
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.8e-45 Score=321.01 Aligned_cols=304 Identities=38% Similarity=0.680 Sum_probs=273.6
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.+++++||+|+++.++|+++...+...++..|+++++++..|+++++++++++|++|++++|+||+|.+.|+
T Consensus 89 ~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl 168 (398)
T PRK08249 89 MAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQIEAEIAKGCDLLYLETPTNPTLKIVDI 168 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHHHHhcCCCCeEEEEECCCCCCCccCCH
Confidence 3566 455568899999999999999887777777788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|.++|+++|+++|+|++|+.+....+...++|+++.|++|+++|+....+|+++.+ +.+.+.+.......+..+++.
T Consensus 169 ~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~-~~l~~~l~~~~~~~g~~~s~~ 247 (398)
T PRK08249 169 ERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFLSGHADALGGVVCGS-KELMEQVYHYREINGATMDPM 247 (398)
T ss_pred HHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceecCCCCCceEEEEECC-HHHHHHHHHHHHhcCCCCCHH
Confidence 9999999999999999999997765555567899999999999977665567888775 446666666666778889999
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-CHHHHHHHHh
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVE 238 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 238 (307)
.++++.++++.+..|++++.++++.+.++|+.++.+.+++||++.++|+++++.++..+.|++++|.++ +.+.+.+|++
T Consensus 248 ~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~ 327 (398)
T PRK08249 248 SAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLP 327 (398)
T ss_pred HHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998887788999999994 5566889999
Q ss_pred cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
.|+...+.+++|+..++.++|...+|..++.+.+...|..++.||+|+|+||.+.+++.|.++|+.+
T Consensus 328 ~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 394 (398)
T PRK08249 328 KLRYAHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGIEDTEDLIADLEQAFAHL 394 (398)
T ss_pred hCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999754
No 16
>PRK08114 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=2.4e-45 Score=316.37 Aligned_cols=300 Identities=27% Similarity=0.456 Sum_probs=265.2
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ +++++++++||+|++++..|.+....+...++..|+++.+++..|.++++++++++|++|++++|+||+|.+.|+
T Consensus 87 maAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI 166 (395)
T PRK08114 87 AAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADIAKLIQPNTKVVFLESPGSITMEVHDV 166 (395)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCEeecH
Confidence 5788 466778999999999999999998887777888999999999989999999999999999999999999999999
Q ss_pred HHHHHHHHHcC--CEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCC
Q 021783 80 RKIAEMAHAHG--ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 157 (307)
Q Consensus 80 ~~l~~~~~~~~--~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (307)
++|+++||++| +++++|++++.|...++.++|+|+++.|.+||++|++.+.+|+++.+++ ..+.+.......|..++
T Consensus 167 ~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~-~~~~l~~~~~~~G~~~~ 245 (395)
T PRK08114 167 PAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANAR-CWEQLRENSYLMGQMVD 245 (395)
T ss_pred HHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHH-HHHHHHHHHHhccCCCC
Confidence 99999999984 9999999999998889999999999999999999999888998877654 44445556667788999
Q ss_pred hhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC---HHHHH
Q 021783 158 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---LALSK 234 (307)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 234 (307)
+..+|+..++++++..|++++.+++..+.++|+.++.+.+++||+++++|+++++.++.++.|++++|.+++ .+.+.
T Consensus 246 p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~ 325 (395)
T PRK08114 246 ADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLA 325 (395)
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998887889999999964 56789
Q ss_pred HHHhcCCcceeecCCCCccceeecccc--cCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 235 HVVETTKYFSITVSFGSVKSLISMPCF--MSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 235 ~~~~~l~~~gi~v~~g~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
++++.++...+.+++|+..++.++|.. ..+.. +.+ ..+...+.||+|+|+||.+.+++.|.++|+++
T Consensus 326 ~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~-~~~---~~~~~~~liRlSvGlEd~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 326 NYLDNFSLFSMAYSWGGFESLILANQPEEIAAIR-PAG---EVDFTGTLIRLHIGLEDVDDLIADLAAGFARI 394 (395)
T ss_pred HHHHhCCcceeecccCCccceeccCCchhhhccC-Chh---HhcCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 999999999999999999998874422 22222 211 24455689999999999999999999999764
No 17
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.1e-44 Score=314.93 Aligned_cols=303 Identities=41% Similarity=0.616 Sum_probs=271.2
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCC-CceEEEEeCCCCCcccccc
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~ 78 (307)
|+|+ .++.+++++||+|+++.+.|+++...+..+ +..|++++.++. |++++++++++ ++++|++++|+||+|.+.|
T Consensus 78 ~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~~~-d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d 155 (385)
T PRK08574 78 MAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLAYP-STEDIIEAIKEGRTKLVFIETMTNPTLKVID 155 (385)
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHh-hccCcEEEEECC-CHHHHHHhcCccCceEEEEECCCCCCCEecC
Confidence 3556 455678999999999999999888666553 778999988765 68999999987 9999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCCh
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 158 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (307)
+++|.++|+++|+++|+|++|+.|....+...|+|++++|++|+++|+.++.+|+++++++.+.+.+.......+..+++
T Consensus 156 l~~I~~la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p 235 (385)
T PRK08574 156 VPEVAKAAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQP 235 (385)
T ss_pred HHHHHHHHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCH
Confidence 99999999999999999999998876666678999999999999988877778977777677777776666667778889
Q ss_pred hhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhcc--CCCceEEEEeC-CHHHHHH
Q 021783 159 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK--GAGSVLSFLTG-SLALSKH 235 (307)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~ 235 (307)
..++++..+++.+..|+++..++++.+.++|+.++.+.+++||++.++|++.++.++.. +.|++++|.++ +.+.+..
T Consensus 236 ~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~ 315 (385)
T PRK08574 236 FEAYLVLRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAVLK 315 (385)
T ss_pred HHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988653 57899999994 6777899
Q ss_pred HHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 236 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 236 ~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
|++.|+...+.+++|+..++.++|...+|..++.+.+...|..++.||+|+|+||.+.+++.|.++|+++
T Consensus 316 ~~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~~ 385 (385)
T PRK08574 316 FLRSLKLIKPSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGLEDVEDLIEDLDQALGSI 385 (385)
T ss_pred HHHcCCcceEccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999763
No 18
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.2e-44 Score=315.69 Aligned_cols=301 Identities=47% Similarity=0.762 Sum_probs=270.8
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.+++++||+|+++++.|++....+...++..|++++.++..|++++++.++++|++|++++|+||+|...|+
T Consensus 86 ~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl 165 (388)
T PRK07811 86 MAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVRAAITPRTKLIWVETPTNPLLSITDI 165 (388)
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHHHhcCcCCeEEEEECCCCCcceecCH
Confidence 3566 455678899999999999998887776677778899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|.++|+++|+++|+|++|+.+....+...++|++++|++|+++|+.++++|+++++++.+.+.+.......+...++.
T Consensus 166 ~~I~~la~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~ 245 (388)
T PRK07811 166 AALAELAHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPF 245 (388)
T ss_pred HHHHHHHHHcCCEEEEECCCCccccCCchhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHH
Confidence 99999999999999999999988766666678999999999999888888899999987777777766666667777888
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-CHHHHHHHHh
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVE 238 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 238 (307)
.+++...+++.+..|+++..++++.+.++|+.++.+..+.+|++.++|+++++.++..+.|++++|.++ +.+.+.+|++
T Consensus 246 ~a~l~~~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~ 325 (388)
T PRK07811 246 DAYLTLRGLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCA 325 (388)
T ss_pred HHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999888888999999995 5677899999
Q ss_pred cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 304 (307)
.|+...+.+++|+..++.++|...+|..++.+ ..|..++.||+|+|+||.+.+++.|.++|++
T Consensus 326 ~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~---~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 388 (388)
T PRK07811 326 RTKVFTLAESLGGVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLADLEQALGQ 388 (388)
T ss_pred hCCcceeeccCCCCcceEeCCcccCcccCCHh---hcCCCCCEEEEEeCCCCHHHHHHHHHHHhhC
Confidence 99999999999999999999988888887744 4588999999999999999999999999863
No 19
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=100.00 E-value=9.4e-45 Score=316.93 Aligned_cols=302 Identities=38% Similarity=0.615 Sum_probs=274.4
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.+++++||+|+++...|++.+..+...++..|+++++++..|+++++++++++|++|++++|+||+|.+.|+
T Consensus 95 ~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~tklV~~esp~Nptg~v~dl 174 (403)
T PRK07810 95 MSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQWEEALSVPTQAVFFETPSNPMQSLVDI 174 (403)
T ss_pred HHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCeecCH
Confidence 4566 455678899999999998998887777777888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|.++|+++|+++|+|++|+.+....+...|+|+++.|++|+++|+....+|+++++++.+.+.+.......+..+++.
T Consensus 175 ~~I~~la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~ 254 (403)
T PRK07810 175 AAVSELAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAF 254 (403)
T ss_pred HHHHHHHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHH
Confidence 99999999999999999999988877667789999999999999876666789999987766655665556677789999
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-----HHHHH
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----LALSK 234 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 234 (307)
.+++...+++.+..|++++.+++..+.++|+.++.+.+++||+++++|++.++.++.++.|++++|.+++ .+.+.
T Consensus 255 ~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~ 334 (403)
T PRK07810 255 NAWVLLKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAF 334 (403)
T ss_pred HHHHHHhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999888889999999963 56688
Q ss_pred HHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHH
Q 021783 235 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 302 (307)
Q Consensus 235 ~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l 302 (307)
+|++.|+...+.+++|...++..+|...+|..++.+.+...|..++.+|+|+|+|+.+.+++.|.++|
T Consensus 335 ~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGlE~~~dli~dl~~Al 402 (403)
T PRK07810 335 EVLDKLRVIDISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGLEDTDDLIADLDRAL 402 (403)
T ss_pred HHHHhCCceEEeccCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999989999999999999999999999999999986
No 20
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=100.00 E-value=9.4e-45 Score=316.47 Aligned_cols=303 Identities=40% Similarity=0.719 Sum_probs=270.2
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.+++++||+|+++++.|+++...+...++..|+++++++.+|+++++++++++|++|++++|+||+|.+.|+
T Consensus 86 ~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklV~ie~p~NptG~v~dl 165 (390)
T PRK08133 86 MAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAVRPNTKLFFLETPSNPLTELADI 165 (390)
T ss_pred HHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCCcCCH
Confidence 3455 456678899999999999999888777667788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|.++|+++|+++|+|++++.+....+...|+|+++.|+||+++++....+|+++.+++.+ +.+.......+..+++.
T Consensus 166 ~~I~~la~~~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~-~~~~~~~~~~g~~~~~~ 244 (390)
T PRK08133 166 AALAEIAHAAGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKELM-EEVFGFLRTAGPTLSPF 244 (390)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCHHHH-HHHHHHHHHhCCCCCHH
Confidence 99999999999999999999888766666778999999999999665444568888776544 44444555567778888
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-CHHHHHHHHh
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVE 238 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 238 (307)
.+++...+++.+..|++++.+++..+.++|++++.+.++++|++.++|+++++.++..+.|++++|.++ +.+.+.+|++
T Consensus 245 ~a~~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~ 324 (390)
T PRK08133 245 NAWVFLKGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVID 324 (390)
T ss_pred HHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998888788999999995 5677889999
Q ss_pred cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 304 (307)
.++...+.+++|+..++.++|...+|..++.+.+...|..++.||+|+|+||.|.+++.|.++|+.
T Consensus 325 ~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 390 (390)
T PRK08133 325 ATRLISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGLEDVADIKADLARGLAA 390 (390)
T ss_pred hCCcceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999999999999863
No 21
>PRK05939 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-44 Score=314.25 Aligned_cols=303 Identities=33% Similarity=0.505 Sum_probs=265.8
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.++++|||+|+++++.|+++...+.. ++..|++++.++..|+++++++++++|++|++++|+||+|.+.|+
T Consensus 72 ~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~v~~~d~e~l~~~l~~~tklV~vesp~NptG~v~dl 150 (397)
T PRK05939 72 MAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGT-LRGLGVEVTMVDATDVQNVAAAIRPNTRMVFVETIANPGTQVADL 150 (397)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCccccHHHHHHH-HHhcCCEEEEECCCCHHHHHHhCCCCCeEEEEECCCCCCCCHHhH
Confidence 4667 45566899999999999999887766644 567899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcCh--------h-----------
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------R----------- 140 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~--------~----------- 140 (307)
++|.++|+++|+++++|++|+.+...++...|+|+++.|+||+++|+.+..+|++..+.. .
T Consensus 151 ~~I~~la~~~gi~livD~t~a~~~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (397)
T PRK05939 151 AGIGALCRERGLLYVVDNTMTSPWLFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQ 230 (397)
T ss_pred HHHHHHHHHcCCEEEEECCcccccccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhh
Confidence 999999999999999999999887667777899999999999998876666666553221 0
Q ss_pred --HHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 141 --LAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 141 --~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+.+.........|..+++..+|+..++++++..|++++.+|+..+.++|+.++.+.++.+|++.++|+++++.++.++
T Consensus 231 ~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g 310 (397)
T PRK05939 231 WGLTQIRKKGLRDMGATLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRH 310 (397)
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccC
Confidence 011111223356788999999999999999999999999999999999999999999999999999999999888888
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHH
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDL 298 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l 298 (307)
.|++++|.+++.+.+..+++.++.....+++|+..++.++|...+|..++.+.+...|..++.||+|+|+||.+.+++.|
T Consensus 311 ~g~l~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGlEd~~dLi~dl 390 (397)
T PRK05939 311 YGGLLSFELADGIDCFDFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGIEDEADLIADF 390 (397)
T ss_pred CceEEEEEeCCHHHHHHHHHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHH
Confidence 89999999976666889999999988999999999999999999999999888888999999999999999999999999
Q ss_pred HHHHhc
Q 021783 299 DKALRT 304 (307)
Q Consensus 299 ~~~l~~ 304 (307)
.++|++
T Consensus 391 ~~Al~~ 396 (397)
T PRK05939 391 EQALDA 396 (397)
T ss_pred HHHHhc
Confidence 999975
No 22
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=100.00 E-value=1.6e-44 Score=314.77 Aligned_cols=303 Identities=39% Similarity=0.716 Sum_probs=269.9
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
+|+ .++.+++++||+|+++++.|+.....+...+...|+++++++.+|+++++++++++|++|++++|+||+|.+.|++
T Consensus 85 ~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~ 164 (391)
T TIGR01328 85 GAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEVKAHIKDNTKIVYFETPANPTMKLIDME 164 (391)
T ss_pred HHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhhccCCeEEEEECCCCCCCcccCHH
Confidence 455 4555678999999999999988887777778889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH--HHhcCCCCCh
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGSGLAP 158 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~--~~~~~~~~~~ 158 (307)
+|.++|+++|+++|+|++|+.+....+...++|+++.|++|+++++++.++|+++.+++ +.+.+... ....+..+++
T Consensus 165 ~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~-li~~l~~~~~~~~~g~~l~~ 243 (391)
T TIGR01328 165 RVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYIGGHGDVVAGLICGKAE-LLQQIRMVGIKDMTGSVISP 243 (391)
T ss_pred HHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccccCCCCceEEEEEcCHH-HHHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999887666667799999999999997766666888887654 44444432 2234567888
Q ss_pred hhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-CHHHHHHHH
Q 021783 159 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVV 237 (307)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 237 (307)
..+++...+++.+..|+++..++++.+.++|+.++.+..+++|++.++|+++++.++.++.|++++|.++ +.+.+.+|+
T Consensus 244 ~~a~l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~f~ 323 (391)
T TIGR01328 244 FDAWLILRGLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKKLL 323 (391)
T ss_pred HHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999998888778999999995 567789999
Q ss_pred hcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 238 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 238 ~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
+.|+...+.+++|+..++.++|...+|..++.+.+...|..++.||+|+|+||.+.+++.|.++|+++
T Consensus 324 ~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 391 (391)
T TIGR01328 324 NNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGLEDADDLIADLKQALDAL 391 (391)
T ss_pred HhCCcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999864
No 23
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.3e-44 Score=315.25 Aligned_cols=305 Identities=32% Similarity=0.542 Sum_probs=273.6
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-ChHHHHhhcCCCceEEEEeCCCCCcccccc
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 78 (307)
|+|+ .++++++++||+|+++.+.|.++...+...+...|+++++++.. |+++++++++++||+|++++|+||++.+.|
T Consensus 86 ~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D 165 (432)
T PRK06702 86 QAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALANDKTKLVYAESLGNPAMNVLN 165 (432)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCcCCeEEEEEcCCCccccccC
Confidence 5677 46667899999999999999988877666678899999999984 899999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcCh---------h---------
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE---------R--------- 140 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~---------~--------- 140 (307)
+++|.++|+++|+++++|++++.+....+.+.|+|+++.|.+||++|+.+..+|+++.... .
T Consensus 166 i~~I~~iA~~~gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~ 245 (432)
T PRK06702 166 FKEFSDAAKELEVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYH 245 (432)
T ss_pred HHHHHHHHHHcCCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCccccccccccccccccccc
Confidence 9999999999999999999999888888899999999999999999999999998874321 0
Q ss_pred -------------HHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCC
Q 021783 141 -------------LAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 207 (307)
Q Consensus 141 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~ 207 (307)
+.+.........+..++++.+|+...+++++..|++++.+|+..+.++|+.++.+.++.+|+++++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p 325 (432)
T PRK06702 246 GVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNE 325 (432)
T ss_pred ccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCc
Confidence 1111223344556789999999999999999999999999999999999999999999999999999
Q ss_pred chHHHhhhc-cCCCceEEEEeC-CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEE
Q 021783 208 GHELHYSQA-KGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 285 (307)
Q Consensus 208 ~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis 285 (307)
++.++.++. ++.+++++|.+. +.+.+.+|++.|+...+.+++|+..++..+|...+|..++.+.+...|..++.||+|
T Consensus 326 ~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlS 405 (432)
T PRK06702 326 NYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLS 405 (432)
T ss_pred cHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEE
Confidence 999998876 667899999994 667788999999999999999999999999999999999999999999999999999
Q ss_pred eccCChHHHHHHHHHHHhcC
Q 021783 286 VGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 286 ~~~~~~~~~i~~l~~~l~~~ 305 (307)
+|+||.|.+++.|.++|+.-
T Consensus 406 vGlEd~eDLi~Dl~~Al~~~ 425 (432)
T PRK06702 406 VGIEDVSDIIADLEAALVGG 425 (432)
T ss_pred eccCCHHHHHHHHHHHHhcC
Confidence 99999999999999999753
No 24
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.7e-44 Score=316.37 Aligned_cols=305 Identities=40% Similarity=0.626 Sum_probs=270.8
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEec-CCChHHHHhhcCCCceEEEEeCCCCCcccccc
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIGPWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 78 (307)
|+|+ +++.+++++||+|+++...|.++...+...+...|++++.++ ..|+++++++++++|++|++++++||+|.+.|
T Consensus 94 ~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~l~~ai~~~tklV~ie~~sNp~G~v~D 173 (436)
T PRK07812 94 QAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDAWRAAVRPNTKAFFAETISNPQIDVLD 173 (436)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHHHHHhCCCCCeEEEEECCCCCCCeecC
Confidence 4677 567778999999999999998888766666778999999996 56899999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChh------------------
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER------------------ 140 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~------------------ 140 (307)
+++|.++|+++|+++|+|++++.+....+..+|+|+++.|++|+++|+++..+|+++.+...
T Consensus 174 l~~I~~la~~~gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~ 253 (436)
T PRK07812 174 IPGVAEVAHEAGVPLIVDNTIATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYH 253 (436)
T ss_pred HHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccc
Confidence 99999999999999999999998887777788999999999999988877778877753210
Q ss_pred ------------HHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc
Q 021783 141 ------------LAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 208 (307)
Q Consensus 141 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 208 (307)
+.+.........|..+++..+|+..++++.+..|++++.+++.++.++|+.++.+..+++|++.++|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~ 333 (436)
T PRK07812 254 GVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPW 333 (436)
T ss_pred cchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCcc
Confidence 01112234456788999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhhhc-cCCCceEEEEeC-CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe
Q 021783 209 HELHYSQA-KGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 286 (307)
Q Consensus 209 ~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 286 (307)
+.++.++. ++.|++++|.+. +.+.+..|++.|+...+.+++|...++.++|...+|..++.+.+...|..++.||+|+
T Consensus 334 ~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSv 413 (436)
T PRK07812 334 YERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAV 413 (436)
T ss_pred HHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEe
Confidence 99998865 678899999994 5667899999999999999999999999999999999999999999999999999999
Q ss_pred ccCChHHHHHHHHHHHhcC
Q 021783 287 GIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 287 ~~~~~~~~i~~l~~~l~~~ 305 (307)
|+||.+.+++.|.++|+++
T Consensus 414 GlEd~~dli~dl~~Al~~~ 432 (436)
T PRK07812 414 GIEGIDDILADLEAGFAAA 432 (436)
T ss_pred ccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999864
No 25
>PRK05967 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.5e-44 Score=311.72 Aligned_cols=298 Identities=30% Similarity=0.489 Sum_probs=264.2
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .+++++++|||+|+++++.|+++...+...++.+|+++.+++..+.+.++++++++|++|++++|+||++...|+
T Consensus 89 ~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l~~al~~~TklV~lesPsNP~l~v~dl 168 (395)
T PRK05967 89 LAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGIAKLMRPNTKVVHTEAPGSNTFEMQDI 168 (395)
T ss_pred HHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHhcCcCceEEEEECCCCCCCcHHHH
Confidence 5677 566678999999999999999988767677889999999998878888999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|+++|+++|+++++|++|+.+....+.++|+|+++.|.+|+++|.+++++|++..+++ ..+.+.......|..+++.
T Consensus 169 ~~I~~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~-~~~~l~~~~~~~G~~~~p~ 247 (395)
T PRK05967 169 PAIAEAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEK-CWPQLLEAHGTLGLCAGPD 247 (395)
T ss_pred HHHHHHHHHhCCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHH-HHHHHHHHHHHcCCCCCHH
Confidence 999999999999999999999988889999999999999999999999999998877654 4444555555678889999
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-----CHHHHH
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-----SLALSK 234 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 234 (307)
.+|+..++++++..|++++.+++..+.++|+.++.+.+++||+++++|+++++.++..+.+++++|.++ +.+.+.
T Consensus 248 da~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~ 327 (395)
T PRK05967 248 DTYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAH 327 (395)
T ss_pred HHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHH
Confidence 999999999999999999999999999999999999999999999999999998887788999999996 357789
Q ss_pred HHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 235 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 235 ~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
+|++.|+...+.+++|+..++.+++ .++...+...|..++.||||+|+||.+.+++.|.++|+++
T Consensus 328 ~f~~~l~l~~~~~slG~~~sLi~~~------~~~~~~~~~~~~~~~liRlSvGlEd~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 328 AFLDALEIFGLGYSWGGYESLALHV------KLGDRTVAKAPYAGPVIRLQIGLEDVPDLKADLERGFAAA 392 (395)
T ss_pred HHHHhCCcceEccCCCCcceeeeeC------CCChhHhhhccCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999988763 2233223334666789999999999999999999999865
No 26
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.3e-45 Score=295.49 Aligned_cols=304 Identities=41% Similarity=0.669 Sum_probs=277.3
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|||+ .+++.+.++||+|+.++.-|+++.+.+...++.+|+++++++.+|++.++++++++||+|++++..||.+.+.|+
T Consensus 87 ~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~~aI~~nTkavf~EtigNP~~~v~Di 166 (426)
T COG2873 87 QAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFEAAIDENTKAVFAETIGNPGLDVLDI 166 (426)
T ss_pred hHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHHHHhCcccceEEEEeccCCCccccCH
Confidence 6777 677889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHH----------------
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK---------------- 143 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~---------------- 143 (307)
++|+++||++|+++|+|.+.+.+++..+.+.|+|+++.|.+||++|....++|+++-....-..
T Consensus 167 e~ia~iAh~~gvpliVDNT~atpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~Yh 246 (426)
T COG2873 167 EAIAEIAHRHGVPLIVDNTFATPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYH 246 (426)
T ss_pred HHHHHHHHHcCCcEEEecCCCcceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCcccc
Confidence 9999999999999999999999988899999999999999999999888888888765331110
Q ss_pred ----------------HHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCC
Q 021783 144 ----------------ELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 207 (307)
Q Consensus 144 ----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~ 207 (307)
.-....+..|..++++.+|+.+.+++.+..|++++.+|+.++.++|+.+|++.++.|++|+++|
T Consensus 247 Gl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~ 326 (426)
T COG2873 247 GLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHP 326 (426)
T ss_pred ceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCc
Confidence 0112345678899999999999999999999999999999999999999999999999999999
Q ss_pred chHHHhhh-ccCCCceEEEEeCC-HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEE
Q 021783 208 GHELHYSQ-AKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 285 (307)
Q Consensus 208 ~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis 285 (307)
.+.+..+. +++.++++.|.+++ .+...++++.|+..--....|...++..+|+.-+|..++.+.+.+.|..++.||+|
T Consensus 327 ~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlS 406 (426)
T COG2873 327 YHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLS 406 (426)
T ss_pred chhHHHhhccCCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEE
Confidence 99998765 68889999999954 47789999999988888899999999999999999999999999999999999999
Q ss_pred eccCChHHHHHHHHHHHhc
Q 021783 286 VGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 286 ~~~~~~~~~i~~l~~~l~~ 304 (307)
+|.||++.++..|+++|++
T Consensus 407 VGIEd~~DiiaDl~qAl~~ 425 (426)
T COG2873 407 VGIEDIDDIIADLEQALEA 425 (426)
T ss_pred eccCCHHHHHHHHHHHHhc
Confidence 9999999999999999975
No 27
>PRK06234 methionine gamma-lyase; Provisional
Probab=100.00 E-value=2.2e-44 Score=315.16 Aligned_cols=304 Identities=40% Similarity=0.666 Sum_probs=271.3
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.+++++||+|+++++.|+.+...+...++..|+++++++..|++++++.++++|++|++++|+||||.+.|+
T Consensus 89 ~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~~i~~~tklI~iesP~NPtG~v~dl 168 (400)
T PRK06234 89 MGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVRNALKANTKVVYLETPANPTLKVTDI 168 (400)
T ss_pred HHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHHHHHhccCCeEEEEECCCCCCCCcCCH
Confidence 3456 455678899999999999998888777677788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHc--CCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH--HHHhcCCC
Q 021783 80 RKIAEMAHAH--GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF--LQNAEGSG 155 (307)
Q Consensus 80 ~~l~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~--~~~~~~~~ 155 (307)
++|.++|+++ |+++++|++|+.+....+...++|++++|++|+++|+...++|+++++++ +.+.+.. .....+..
T Consensus 169 ~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~-~~~~l~~~~~~~~~g~~ 247 (400)
T PRK06234 169 KAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEE-FINQVKLFGIKDMTGSV 247 (400)
T ss_pred HHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccccccCCCCceeEEEEecHH-HHHHHHHHHHHHhcCCC
Confidence 9999999997 99999999999887666667789999999999997765566799998865 4444433 23345678
Q ss_pred CChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-CHHHHH
Q 021783 156 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSK 234 (307)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 234 (307)
+++..+++...+++.+..|++++.++++.+.++|+.++.+.++++|++.++|++.++.++.++.+++++|.++ +.+.+.
T Consensus 248 l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~ 327 (400)
T PRK06234 248 IGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGK 327 (400)
T ss_pred CCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHH
Confidence 8899999999999999999999999999999999999999999999999999999988877778999999995 556789
Q ss_pred HHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 235 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 235 ~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
.|++.|+..++.+++|+..++..+|...+|..++.+.+...|..++.+|+|+|+||.+.+++.|.++|+++
T Consensus 328 ~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 328 VVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALDLI 398 (400)
T ss_pred HHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999753
No 28
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=100.00 E-value=3.7e-44 Score=311.65 Aligned_cols=303 Identities=54% Similarity=0.867 Sum_probs=275.0
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.+++++||+|+++.+.|.+....+...++..|++++.++.+|++++++.+++++++|++++|+||+|.+.|+
T Consensus 65 ~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl 144 (369)
T cd00614 65 MAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEALEAAIKPETKLVYVESPTNPTLKVVDI 144 (369)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCH
Confidence 3556 556678899999999999999988777777788999999999999999999998899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|.++|+++|+++|+|++|+.+....+..+++|+++.|++|+++|++.+++|+++++++.+.+.+.......+..+++.
T Consensus 145 ~~i~~la~~~g~~livD~t~~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~ 224 (369)
T cd00614 145 EAIAELAHEHGALLVVDNTFATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPF 224 (369)
T ss_pred HHHHHHHHHcCCEEEEECCCcchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHH
Confidence 99999999999999999999988776667789999999999999877768899999987556666666666677788899
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-CHHHHHHHHh
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVE 238 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 238 (307)
.+++...+++.+..|++++.++++.+.++|+.++.+.++.+|++.++|+++++.++.++.+++++|.++ +.+.+.++++
T Consensus 225 ~a~~~l~~l~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~ 304 (369)
T cd00614 225 DAWLLLRGLKTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLN 304 (369)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998877778999999996 6777899999
Q ss_pred cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
.|+...+.+++|+..++.++|...+|..++.+.+...|.+++.+|+|+|+||.+.+++.|.++|+
T Consensus 305 ~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGlE~~~dl~~dl~~al~ 369 (369)
T cd00614 305 ALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGIEDVEDLIADLEQALK 369 (369)
T ss_pred cCCcceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhhC
Confidence 99999999999999999999999999999988888899999999999999999999999999874
No 29
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-44 Score=302.82 Aligned_cols=304 Identities=46% Similarity=0.698 Sum_probs=286.0
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++..++++|+.|+..+..|..+...++.....+|++...+++++++++++++.+++++|++++|.||++.+.|+
T Consensus 102 maA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI 181 (409)
T KOG0053|consen 102 MAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKILKAIKENTKAVFLESPSNPLLKVPDI 181 (409)
T ss_pred HHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHHHHhhccCceEEEEECCCCCccccccH
Confidence 5666 566778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|.++||++|+++++|++.+.+...++..+|+|+++.|.+|+++|.+.+++|.++.+.....+.++..+...+..+++.
T Consensus 182 ~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~ 261 (409)
T KOG0053|consen 182 EKLARLAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPF 261 (409)
T ss_pred HHHHHHHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHH
Confidence 99999999999999999999999888999999999999999999999999999999987888888999999999999999
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc-eEEEEeCCHHHHHHHHh
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSLALSKHVVE 238 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 238 (307)
.+++..++++++..|++++.+++..+.++++.++.+.+++||+|+++|+++++.++.++..+ ++++.+.+.+.+.++++
T Consensus 262 ~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~~ 341 (409)
T KOG0053|consen 262 DLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFYD 341 (409)
T ss_pred HHHHHhcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887766555 44455577888999999
Q ss_pred cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
.++..-..++.|+.+++.++|+.++|.. +.+.+...|..++-||+|+|+|+++.+++.|.++|+.+
T Consensus 342 ~LK~~~~a~SlG~~eSL~~~p~~mth~~-~~e~~~~~Gi~~~LVRvSVGiEd~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 342 ALKLFTKAPSLGGNESLAEPPAIMTHAS-ELEEREKFGIDPNLVRVSVGIEDIEDLIKDFQQALEKA 407 (409)
T ss_pred hhhhhhcccCcCccchhhcchhhhccCC-CHHHHHhcCCCCCcEEEEeccCCHHHHHHHHHHHHHhh
Confidence 9999889999999999999999999999 99999999999999999999999999999999999875
No 30
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=4.1e-44 Score=314.36 Aligned_cols=305 Identities=38% Similarity=0.638 Sum_probs=269.2
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.+++++||+|+++.+.|++....+...+...|+++.+++..|++++++++++++++|++++|+||+|.+.|+
T Consensus 83 ~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le~ai~~~tklV~lesp~NPtG~v~dl 162 (425)
T PRK06084 83 MAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALEALIDERTKAVFCESIGNPAGNIIDI 162 (425)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHHHHhccCCcEEEEeCCCCCCCeecCH
Confidence 4566 455678899999999999998787776666677899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChh-HH----------------
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-LA---------------- 142 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~-~~---------------- 142 (307)
++|.++|+++|+++|+|++|+.+....+..+|+|+++.|++|+++|+....+|+++.+... ..
T Consensus 163 ~~I~~la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (425)
T PRK06084 163 QALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSY 242 (425)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCccc
Confidence 9999999999999999999998887777778999999999999998887778887764321 00
Q ss_pred ----------------HHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCC
Q 021783 143 ----------------KELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 206 (307)
Q Consensus 143 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~ 206 (307)
+.........+..+++..+|+.+++++.+..|++++.+++..+.++|+.++.+..+++|++.++
T Consensus 243 ~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~ 322 (425)
T PRK06084 243 HGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDH 322 (425)
T ss_pred ccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCc
Confidence 0011223456788999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHhhhccC-CCceEEEEeC-CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEE
Q 021783 207 PGHELHYSQAKG-AGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRI 284 (307)
Q Consensus 207 ~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRi 284 (307)
|++.++.++..+ .|++++|.++ +.+.+.+|++.|+...+.+++|+..++.++|...+|..++.+.+...|.+++.||+
T Consensus 323 p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~ 402 (425)
T PRK06084 323 PEHELARRYMGGKPASILSFGIKGGQAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRL 402 (425)
T ss_pred ccHHHHHHhCCCCcceEEEEEecCCHHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEE
Confidence 999999887766 6899999994 55668899999999999999999999999999999999999888899999999999
Q ss_pred EeccCChHHHHHHHHHHHhcC
Q 021783 285 SVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 285 s~~~~~~~~~i~~l~~~l~~~ 305 (307)
|+|+||.+.+++.|.++|+++
T Consensus 403 svGlEd~~dLi~dl~~Al~~~ 423 (425)
T PRK06084 403 SIGIEHIDDIIADLAQALDAS 423 (425)
T ss_pred EeccCCHHHHHHHHHHHHHhh
Confidence 999999999999999999865
No 31
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=4.5e-44 Score=313.82 Aligned_cols=304 Identities=37% Similarity=0.554 Sum_probs=268.7
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEec-CCChHHHHhhcCCCceEEEEeCCCCCcccccc
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIGPWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 78 (307)
|+|+ +++.+++++||+|++++..|.++...+...++..|+++++++ ..|+++++++++++|++|+++++.||+|.+.|
T Consensus 94 ~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d 173 (437)
T PRK05613 94 QAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPESWQAAVQPNTKAFFGETFANPQADVLD 173 (437)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHHHHHhCCccCeEEEEECCCCCCCcccC
Confidence 3555 556677899999999999999987666667788999999997 45899999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChh------------------
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER------------------ 140 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~------------------ 140 (307)
+++|.++|+++|+++|+|++++.|....+..+|+|++++|+||+++|++...+|+++.+.+.
T Consensus 174 i~~I~~la~~~gi~livD~t~a~g~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~ 253 (437)
T PRK05613 174 IPAVAEVAHRNQVPLIVDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTP 253 (437)
T ss_pred HHHHHHHHHHcCCeEEEECCCccccccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCC
Confidence 99999999999999999999998887777788999999999999977666677887754220
Q ss_pred -----------------HHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCC
Q 021783 141 -----------------LAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL 203 (307)
Q Consensus 141 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l 203 (307)
..+.........|..+++..+|+..++++++..|++++.+|+..+.++|+.++.+.++.+|++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl 333 (437)
T PRK05613 254 DPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGL 333 (437)
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEECCCC
Confidence 001122344566889999999999999999999999999999999999999999999999999
Q ss_pred CCCCchHHHhhhc-cCCCceEEEEeC-CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCe
Q 021783 204 PEHPGHELHYSQA-KGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDL 281 (307)
Q Consensus 204 ~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 281 (307)
+++|++.++.++. .+.|++++|.++ +.+.+..|++.|+...+.+++|+..++.++|...+|..++.+.+...|..++.
T Consensus 334 ~~~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~l 413 (437)
T PRK05613 334 KDSPWYATKEKLGLKYTGSVLSFDIKGGKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQAT 413 (437)
T ss_pred CCCccHHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCe
Confidence 9999999998874 567899999995 56778999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCChHHHHHHHHHHHhc
Q 021783 282 VRISVGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 282 iRis~~~~~~~~~i~~l~~~l~~ 304 (307)
||+|+|+||.+.+++.|.++|++
T Consensus 414 iRlsvGlE~~~dLi~Dl~~Al~~ 436 (437)
T PRK05613 414 VRLSVGIEDIDDIIADLEGGFAA 436 (437)
T ss_pred EEEEeccCCHHHHHHHHHHHHhh
Confidence 99999999999999999999975
No 32
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=7.8e-44 Score=308.24 Aligned_cols=300 Identities=27% Similarity=0.461 Sum_probs=259.7
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.++++|||+|+++++.|++....+....+..|+++..++..+.++++++++++|++|++++|+||+|...|+
T Consensus 75 ~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l~~~i~~~tklV~lesp~Np~g~~~dl 154 (377)
T TIGR01324 75 LAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDIATLIQPNTKVLFLEAPSSITFEIQDI 154 (377)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCcHHHH
Confidence 4566 566678999999999999998877555445677899999988766689999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|+++|+++|+++++|++|+.|....+.++|+|+++.|++|+++|++++.+|+++.+++.+ +.+.......|..+++.
T Consensus 155 ~~I~~la~~~g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~-~~l~~~~~~~G~~l~p~ 233 (377)
T TIGR01324 155 PAIAKAARNPGIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTW-DQLREHSYLMGQMVDAD 233 (377)
T ss_pred HHHHHHHHHcCCEEEEECCCccccccCccccCceEEEecCceeccCCCCceEEEEEeCHHHH-HHHHHHHHHhCCCCCHH
Confidence 99999999999999999999999887888899999999999999999888999998876543 44444455668888999
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC--CHHHHHHHH
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--SLALSKHVV 237 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 237 (307)
.+|...++++.+..|++++.+++..+.++|+.++.+.++++|+++++|+++++.++.++.+++++|.++ +.+.+.+|+
T Consensus 234 ~a~~~~rgl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~ 313 (377)
T TIGR01324 234 DAYTTLRGLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFL 313 (377)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988877778899999995 466789999
Q ss_pred hcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 238 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 238 ~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
+.|+..++.+++|+..++..+|+. ..+...+...|..++.||+|+|+||.+.+++.|.++|+++
T Consensus 314 ~~l~~~~~~~slG~~~sl~~~~~~----~~~~~~~~~~~~~~~liR~svGlE~~~dl~~dl~~al~~~ 377 (377)
T TIGR01324 314 DHLQLFGLGYSWGGYESLALCNQP----ELGHRPNIKRNLEGPLIRVHIGLENVDDLKADLKAGFEAI 377 (377)
T ss_pred HhCCcceEeccCCCccceeecCCC----CCCHHHHHhccCCCCEEEEEeCCCCHHHHHHHHHHHHhcC
Confidence 999999999999999998763321 1222233456666789999999999999999999999764
No 33
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=100.00 E-value=6.3e-44 Score=310.73 Aligned_cols=301 Identities=44% Similarity=0.731 Sum_probs=269.4
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.+++++||+|+++.+.|++....+...++..|+++++++.+|++++++++++++++|++++|+||+|.+.|+
T Consensus 79 ~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~tklV~le~p~np~g~~~dl 158 (380)
T TIGR01325 79 MSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAVKPNTKLVFVETPSNPLGELVDI 158 (380)
T ss_pred HHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCeeeCH
Confidence 3455 455668899999999999998887777777888999999999999999999999899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|.++|+++|+++|+|++|+.+....+...|+|+++.|++|+++|+....+|+++++++ ..+.+.......+..+++.
T Consensus 159 ~~I~~la~~~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~-~~~~l~~~~~~~g~~~~p~ 237 (380)
T TIGR01325 159 AALAELAHAIGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEE-LMAEVAVYLRHTGPAMSPF 237 (380)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCHH-HHHHHHHHHHhhCCCCCHH
Confidence 999999999999999999998776666667799999999999997765456788888765 4444555555567778888
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhc
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVET 239 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (307)
.++++..+++.+..|++++.++++.+.++|+.++.+.++++|+++++|+++++.++..+.|++++|.+++.+.+..|++.
T Consensus 238 ~a~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~f~~~ 317 (380)
T TIGR01325 238 NAWVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADRAAAWKVLDA 317 (380)
T ss_pred HHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHc
Confidence 89999999999999999999999999999999999999999999999999999888878899999999877778999999
Q ss_pred CCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHH
Q 021783 240 TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 302 (307)
Q Consensus 240 l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l 302 (307)
|+...+.+++|+..++..+|...+|..++.+.+...|..++.||+|+|+||.+.+++.|.++|
T Consensus 318 l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al 380 (380)
T TIGR01325 318 VELVSITNNLGDAKSTITHPATTTHGRMQPEERAAAGIGDGLVRLSVGLEDVDDLIADLKRAL 380 (380)
T ss_pred CCcceEcccCCCCCeeeeCCCccCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHhhC
Confidence 999999999999999999999999999999888899999999999999999999999999875
No 34
>PRK06460 hypothetical protein; Provisional
Probab=100.00 E-value=9.1e-44 Score=308.83 Aligned_cols=303 Identities=38% Similarity=0.618 Sum_probs=267.0
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
+|+ .++.++++|||+|+++.+.|++.+..+...++..|++++.++.++.+.+++.+++++++|++++|+||||.+.|++
T Consensus 71 ~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~ 150 (376)
T PRK06460 71 GAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNIIEKAKSKRYDVVFVENITNPLLRVVDIT 150 (376)
T ss_pred HHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCcccCHH
Confidence 455 4556688999999999998887777777778889999999998776667766678899999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhh
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 160 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (307)
+|.++|+++|+++|+|++|+.+....+...++|+++.|+||+++|++++++|+++.+++ +.+.+.......+...++..
T Consensus 151 ~I~~la~~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~-l~~~l~~~~~~~g~~~~~~~ 229 (376)
T PRK06460 151 ELSKVCKENGSILIVDATFSTPINQKPLELGADIVVHSASKFLAGHNDVIAGLAAGYGK-LLNVIDQMRRTLGTSLDPHA 229 (376)
T ss_pred HHHHHHHHcCCEEEEECCcCccccCChhhcCCCEEEeecceeccCCCCceEEEEecCHH-HHHHHHHHHHhcCCCCCHHH
Confidence 99999999999999999998765444445679999999999998887788999988744 65656655655666677788
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-CHHHHHHHHhc
Q 021783 161 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVET 239 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 239 (307)
++.++.+++.+..+++++.++++.+.++|++++.+.++.+|++.++|+++++.++.++.|++++|.++ +.+.+..+++.
T Consensus 230 a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~ 309 (376)
T PRK06460 230 AYLTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKS 309 (376)
T ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHh
Confidence 89988999999999999999999999999999999999999999999999998888888999999995 56778999999
Q ss_pred CCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 240 TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 240 l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
++...+.+++|+..++..+|...+|..++.+.+...|..++.||+|+|+||.+.+++.|.++|+++
T Consensus 310 l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 310 LKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGIEDVNDLIEDLDRALSTL 375 (376)
T ss_pred CCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999764
No 35
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=8.7e-44 Score=313.10 Aligned_cols=304 Identities=38% Similarity=0.625 Sum_probs=269.9
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.++++|||+|+++.+.|.+....+...+...|++++.++.+|+++++++++++|++|++++|+||+|.+.|+
T Consensus 88 ~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~tklV~vesp~NptG~v~dl 167 (427)
T PRK05994 88 HAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFERAITPRTKAIFIESIANPGGTVTDI 167 (427)
T ss_pred HHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCH
Confidence 3466 555668999999999999999887777666788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcCh-----------------h--
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-----------------R-- 140 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~-----------------~-- 140 (307)
++|.++|+++|+++|+|++++.+....+..+|+|+++.|++|+++|+.+..+|+++.... .
T Consensus 168 ~~I~~la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~ 247 (427)
T PRK05994 168 AAIAEVAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYH 247 (427)
T ss_pred HHHHHHHHHcCCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhh
Confidence 999999999999999999999888777778899999999999999888888888774321 0
Q ss_pred ---HHH----------HHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCC
Q 021783 141 ---LAK----------ELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 207 (307)
Q Consensus 141 ---~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~ 207 (307)
+.+ .........|..+++..+|+...+++.+..|+++..+++..+.++|+.++.+..+.+|+++++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~ 327 (427)
T PRK05994 248 GLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDP 327 (427)
T ss_pred hhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCc
Confidence 110 1111234567789999999999999999999999999999999999999999999999999999
Q ss_pred chHHHhhh-ccCCCceEEEEeC-CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEE
Q 021783 208 GHELHYSQ-AKGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 285 (307)
Q Consensus 208 ~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis 285 (307)
+++++.++ +++.|++++|.++ +.+.+.+|++.|+...+.+++|+..++.++|...+|..++.+.+...|.+++.||+|
T Consensus 328 ~~~~~~~~~~~g~g~~~sf~l~~~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRls 407 (427)
T PRK05994 328 YHALAQKYSPKGAGAVFTFGLKGGYEAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLS 407 (427)
T ss_pred cHHHHHHhcCCCceEEEEEEecCCHHHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEE
Confidence 99999887 4678999999995 667789999999999999999999999999999999999999999999999999999
Q ss_pred eccCChHHHHHHHHHHHhc
Q 021783 286 VGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 286 ~~~~~~~~~i~~l~~~l~~ 304 (307)
+|+||.+.+++.|.++|++
T Consensus 408 vGlE~~~dli~dl~~Al~~ 426 (427)
T PRK05994 408 IGIEDVDDIIADLEQALAK 426 (427)
T ss_pred eccCCHHHHHHHHHHHHhh
Confidence 9999999999999999975
No 36
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=9.9e-44 Score=312.01 Aligned_cols=305 Identities=38% Similarity=0.613 Sum_probs=268.2
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.+++++||+|++++.+|.++...+...+...|+++++++.+|+++++++++++|++|++++++||+|.+.|+
T Consensus 89 t~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l~~~i~~~TklV~~e~~~np~g~v~Di 168 (433)
T PRK08134 89 QAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGWRAAIRPNTRLLFGETLGNPGLEVLDI 168 (433)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCcccCcccCH
Confidence 4677 456667899999999999999887766666678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChh-------------------
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER------------------- 140 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~------------------- 140 (307)
++|.++|+++|+++|+|++++.|....+..+|+|+++.|.+|+++|+..+.+|+++.....
T Consensus 169 ~~I~~la~~~gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (433)
T PRK08134 169 PTVAAIAHEAGVPLLVDSTFTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFH 248 (433)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCccccc
Confidence 9999999999999999999999988877788999999999999987766677776642110
Q ss_pred -------------HHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCC
Q 021783 141 -------------LAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 207 (307)
Q Consensus 141 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~ 207 (307)
..+.........+..+++..+|+...+++.+..|+++..+++..+.++|+.++.+..+.+|++.++|
T Consensus 249 g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p 328 (433)
T PRK08134 249 GMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPELESHP 328 (433)
T ss_pred ccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCc
Confidence 0001111223456788999999999999999999999999999999999999999999999999999
Q ss_pred chHHHhhhc-cCCCceEEEEeC-CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEE
Q 021783 208 GHELHYSQA-KGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 285 (307)
Q Consensus 208 ~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis 285 (307)
++.+..++. ++.|++++|.++ +.+.+.+|++.|+...+.+++|...++.++|...+|..++.+.+...|..++.||+|
T Consensus 329 ~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRls 408 (433)
T PRK08134 329 DHALAKRLLPRGAGSVFSFDLKGGRAAGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLS 408 (433)
T ss_pred cHHHHHHhCCCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEE
Confidence 999987765 668999999995 567789999999999999999999999999999999999999999999999999999
Q ss_pred eccCChHHHHHHHHHHHhcC
Q 021783 286 VGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 286 ~~~~~~~~~i~~l~~~l~~~ 305 (307)
+|+||.|.+++.|.++|+++
T Consensus 409 vGlE~~~dli~dl~~Al~~~ 428 (433)
T PRK08134 409 IGLEDADDLIDDLKRALKAA 428 (433)
T ss_pred eccCCHHHHHHHHHHHHHhh
Confidence 99999999999999999864
No 37
>PRK07503 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.1e-43 Score=310.68 Aligned_cols=304 Identities=39% Similarity=0.668 Sum_probs=268.7
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.++++|||+|+++.+.|......+...++..|++++.++.+|+++++++++++|++|++++|+||+|.+.|+
T Consensus 90 ~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklV~le~p~NPtG~~~di 169 (403)
T PRK07503 90 MGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAALKAAISDKTRMVYFETPANPNMRLVDI 169 (403)
T ss_pred HHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHHHHhcCccCcEEEEeCCCCCCCeeeCH
Confidence 3566 445567899999999999998777666566788999999999999999999999899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH--HHHhcCCCCC
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF--LQNAEGSGLA 157 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~ 157 (307)
++|.++|+++|+++|+|++|+.+....+..+++|++++|++|+++|+.++++|+++.+ +.+.+.+.. .....+..++
T Consensus 170 ~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~-~~l~~~l~~~~~~~~~g~~~s 248 (403)
T PRK07503 170 AAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYLGGHGDITAGLVVGG-KALADRIRLEGLKDMTGAVMS 248 (403)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccccCCCceeEEEEEcC-HHHHHHHHhhhHHhCcCCCCC
Confidence 9999999999999999999998766555567899999999999987777889999865 445554542 2444567888
Q ss_pred hhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-CHHHHHHH
Q 021783 158 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHV 236 (307)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 236 (307)
+..+++...+++.+..|++++.++++.+.++|+.++.+.++++|++.++|++.+..++.++.+++++|.++ +.+.+.++
T Consensus 249 ~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~ 328 (403)
T PRK07503 249 PFDAFLLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGRRF 328 (403)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988877778999999994 56667899
Q ss_pred HhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 237 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 237 ~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
++.++.....+++|...++.++|...+|..++.+.+...|..++.||+|+|+||.+.+++.|.++|+++
T Consensus 329 ~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~Al~~~ 397 (403)
T PRK07503 329 MNALQLFARAVSLGDAESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGLEDVADILADLAQALDAC 397 (403)
T ss_pred HHhCCcceeecccCCCCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHH
Confidence 999998888999999999999998888999999999999999999999999999999999999999764
No 38
>PRK07049 methionine gamma-lyase; Validated
Probab=100.00 E-value=3.6e-43 Score=308.87 Aligned_cols=303 Identities=34% Similarity=0.609 Sum_probs=267.2
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEec-CCChHHHHhhcC-----CCceEEEEeCCCCCc
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIG-----PWTKLVWVESPTNPR 73 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~l~-----~~~~~v~~~~~~n~t 73 (307)
|+|+ .++.+++++||+|++++|.|+.+...+...++..|++++.++ ..|++++++.+. +++++|++++|+|||
T Consensus 108 ~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPt 187 (427)
T PRK07049 108 MSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPT 187 (427)
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCC
Confidence 3566 455678999999999999999988665555678899866665 457788876663 579999999999999
Q ss_pred cccccHHHHHHHHHH------cCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH
Q 021783 74 QQICDIRKIAEMAHA------HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 147 (307)
Q Consensus 74 G~~~~~~~l~~~~~~------~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~ 147 (307)
|.++|++++.+++++ +++++|+|++|..+....+...++|+++.|+||+++|++|+|+|+++.+++ +.+.+..
T Consensus 188 g~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~g~divv~S~SK~~gG~~glr~G~vv~~~~-l~~~l~~ 266 (427)
T PRK07049 188 NSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRKA-LIRQVRA 266 (427)
T ss_pred CcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccccCCCEEEEcCceeecCCCCcEEEEEECCHH-HHHHHHH
Confidence 999999999999988 899999999998776555667789999999999998889999999997744 6666666
Q ss_pred HHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCC--CCCCchHHHhhhccCCCceEEE
Q 021783 148 LQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL--PEHPGHELHYSQAKGAGSVLSF 225 (307)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~ 225 (307)
.....+..+++..++++.++++.+..|++++.++++.+.++|+.++.+.+++||++ +++|+++++.++..+.|++++|
T Consensus 267 ~~~~~g~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~ 346 (427)
T PRK07049 267 LRSAIGTQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSF 346 (427)
T ss_pred HHHhcCCCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEE
Confidence 66667788999999999999999999999999999999999999999999999975 8999999998887788999999
Q ss_pred EeC-CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 021783 226 LTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 226 ~~~-~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 304 (307)
.+. +.+.+.+|++.|+...+.+++|+..++.++|...+|..++.+.+...|..++.||+|+|+||.|.+++.|.++|++
T Consensus 347 ~~~~~~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 426 (427)
T PRK07049 347 DIKGGQAAAFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGIEHPDDLIADLAQALDA 426 (427)
T ss_pred EEcCCHHHHHHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHHhc
Confidence 995 5677899999999999999999999999999999999999999999999999999999999999999999999975
No 39
>PRK06767 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.1e-42 Score=303.67 Aligned_cols=299 Identities=39% Similarity=0.661 Sum_probs=263.5
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.+++++||+|+++++.|+.....+.......|+++..++..|+++++++++++|++|++++|+||+|.+.|+
T Consensus 86 ~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~~~i~~~tklV~lesp~NptG~v~dl 165 (386)
T PRK06767 86 MAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIENKIRPNTKLIFVETPINPTMKLIDL 165 (386)
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhhCcCceEEEEeCCCCCCceecCH
Confidence 3466 455678899999999999998888777666777899999888889999999999899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|.++|+++|+++|+|++|+.+....+...|+|+++.|++|+++|+.+.++|+++++++.+.+.........+..+++.
T Consensus 166 ~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~ 245 (386)
T PRK06767 166 KQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPF 245 (386)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHH
Confidence 99999999999999999999987766666779999999999999877666689999987766665555555566677888
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-CHHHHHHHHh
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVE 238 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 238 (307)
.+++...+++.+..|++++.++++.+.++|++++.+..+.+| ++.++.++.++.+++++|.++ +.+.+..|++
T Consensus 246 ~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p------~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~ 319 (386)
T PRK06767 246 DAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP------EGELASRQMKRGGGVISFSIKGGKEETQAFIN 319 (386)
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECC------CcHHHHHhCCCCCceEEEEEcCCHHHHHHHHH
Confidence 899999999999999999999999999999999999888886 556666666667899999995 5567899999
Q ss_pred cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
.|+..++.+++|+..++.++|...+|..++.+.+...|..++.||+|+|+||.+.+++.|.++|+++
T Consensus 320 ~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~ 386 (386)
T PRK06767 320 DLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQALKKI 386 (386)
T ss_pred hCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999753
No 40
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=100.00 E-value=1.6e-42 Score=305.02 Aligned_cols=302 Identities=40% Similarity=0.640 Sum_probs=263.0
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.+++++||+|+++++.|++....+...++..|++++.++.+|++++++.+++++++|++++|+||+|.+.|+
T Consensus 82 ~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl 161 (418)
T TIGR01326 82 QAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEFEKAIDENTKAVFAETIGNPAINVPDI 161 (418)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCH
Confidence 3556 455678899999999999998887777777888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHH-----------------
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA----------------- 142 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~----------------- 142 (307)
++|.++|+++|+++|+|++|+.+....+...|+|+++.|++|+++| +|.+.|+++++++.+.
T Consensus 162 ~~I~~la~~~~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l~g-~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~ 240 (418)
T TIGR01326 162 EAIAEVAHAHGVPLIVDNTFATPYLCRPIDHGADIVVHSATKYIGG-HGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYH 240 (418)
T ss_pred HHHHHHHHHcCCEEEEECCCchhhcCCchhcCCeEEEECccccccC-CccceEEEEEecccccccccccccccCCCCccc
Confidence 9999999999999999999998765566677899999999999965 5666666666432110
Q ss_pred ---------------HHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCC
Q 021783 143 ---------------KELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 207 (307)
Q Consensus 143 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~ 207 (307)
+.........|..+++..+|+...+++.+..|++++.+++..+.++|..++++..+++|++.++|
T Consensus 241 a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~~~ 320 (418)
T TIGR01326 241 GLVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLASHP 320 (418)
T ss_pred cchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCc
Confidence 11111233446677889999999999999999999999999999999999999999999999999
Q ss_pred chHHHhhhc-cCCCceEEEEeC-CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEE
Q 021783 208 GHELHYSQA-KGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 285 (307)
Q Consensus 208 ~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis 285 (307)
+++++.++. ++.|++++|.++ +.+.+.+|++.|+...+.+++|...++.++|...+|..++.+.+...|..++.||||
T Consensus 321 ~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~s 400 (418)
T TIGR01326 321 HHALAKKYLPKGFGAVLSFEIKGGREAGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPGLIRLS 400 (418)
T ss_pred cHHHHHHhccCCCcceEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCCCeEEEE
Confidence 999998776 678899999994 566688999999999999999999999999999999999998888999999999999
Q ss_pred eccCChHHHHHHHHHHHh
Q 021783 286 VGIEDVNDLISDLDKALR 303 (307)
Q Consensus 286 ~~~~~~~~~i~~l~~~l~ 303 (307)
+|+||.+.+++.|.++|+
T Consensus 401 vGlE~~~dl~~dl~~Al~ 418 (418)
T TIGR01326 401 VGIENIDDIIADLEQALE 418 (418)
T ss_pred ecCCCHHHHHHHHHHhhC
Confidence 999999999999999874
No 41
>PRK07050 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=4.3e-42 Score=299.62 Aligned_cols=299 Identities=28% Similarity=0.471 Sum_probs=263.2
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.++++|||+|+++++.|+.+...+...+...|+++++++..+.+++++.++++|++|++++|+||+|...|+
T Consensus 90 t~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l~~~i~~~tklV~le~p~Np~~~~~di 169 (394)
T PRK07050 90 LAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGIADLIQPNTRLIWLEAPGSVTMEVPDV 169 (394)
T ss_pred HHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCccHhhH
Confidence 3566 556678999999999999999888666666788999999999878889999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|.++|+++|+++|+|++|+.|....+...|+|+++.|++|+++|..++++|+++++++.+.+.+.......|...++.
T Consensus 170 ~~I~~ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~ 249 (394)
T PRK07050 170 PAITAAARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSAD 249 (394)
T ss_pred HHHHHHHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHH
Confidence 99999999999999999999998877778889999999999999888888899999887778777777777778888899
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC---CHHHHHHH
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG---SLALSKHV 236 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 236 (307)
.++++.++++.+..|++++.+++..+.++|++++.+..+++|++.++|++.++.++..+.+++++|.+. +.+...++
T Consensus 250 ~a~l~lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~ 329 (394)
T PRK07050 250 DCSLVLRGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAF 329 (394)
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998887766677899999995 35779999
Q ss_pred HhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 237 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 237 ~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
++.++..++.+++|+..++.. |....|...+ + .+...+.||+|+|+||.+.+++.|.++|+++
T Consensus 330 ~~~l~~~~~~~s~G~~~sl~~-~~~~~~~~~~-~----~~~~~~~iR~svGlE~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 330 VEALELFAIGWSWGGACSLAM-PYDVASMRTA-K----WPHRGTLVRLYIGLEDEADLIADLEQALEAA 392 (394)
T ss_pred HHcCCCCeeccccCCccceEe-eCcccccchh-h----cCCCCCEEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 999999999999999999887 6555554432 1 2244589999999999999999999999764
No 42
>PRK06434 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=2.1e-41 Score=292.23 Aligned_cols=294 Identities=35% Similarity=0.600 Sum_probs=262.0
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCC-CceEEEEeCCCCCcccccc
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~ 78 (307)
|+|+ .++.+++++||+|+++...|+..+..+...+...|+++++++.++.+.++ +++ ++++|++++++||++.+.|
T Consensus 89 ~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~snpt~~v~D 166 (384)
T PRK06434 89 MGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD--FDPSNYDLIYAESITNPTLKVPD 166 (384)
T ss_pred HHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee--ecCCCeeEEEEEcCCCCCceeec
Confidence 5677 56667899999999999999888877777888999999999987666655 454 7999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCCh
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 158 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (307)
+++|.++|++++ +++|++++.+....+...|+|++++|.+|+++|+.++.+|+++++++.+.+.+.......|..+++
T Consensus 167 i~~I~~la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~ 244 (384)
T PRK06434 167 IKNVSSFCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDP 244 (384)
T ss_pred HHHHHHHHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCH
Confidence 999999999998 567999988877777788999999999999988887889999988777766666665566778889
Q ss_pred hhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHh
Q 021783 159 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVE 238 (307)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (307)
..+|+...+++.+..|++++.++++.+.++|+.++.+.+++||+++ ++.++.++.|++++|.+++.+.+..|++
T Consensus 245 ~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~------~~~~~~~g~g~~~sf~l~~~~~~~~f~~ 318 (384)
T PRK06434 245 IQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTE------IGKKVLRGFGGMLSFELRSMEDVHKFIR 318 (384)
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChH------HHHHhcCCCCceEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999874 5666666789999999987888999999
Q ss_pred cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 304 (307)
.|+...+.+++|+..++.++|...+|..++.+.+...|..++.||||+|+||.+.+++.|.++|++
T Consensus 319 ~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGlEd~~dLi~dl~~Al~~ 384 (384)
T PRK06434 319 NLEIPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGIEDIDDLIKDIENALSK 384 (384)
T ss_pred hCCcceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999864
No 43
>PRK07582 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=4.1e-41 Score=291.43 Aligned_cols=290 Identities=36% Similarity=0.569 Sum_probs=248.5
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
+|+ .++.+++++||+|+++++.|+.+.......++..|++++.++.++... .+.+++++|++++|+||+|.+.|++
T Consensus 76 ~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~---~~~~~t~lV~le~p~NPtg~v~di~ 152 (366)
T PRK07582 76 AAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE---AALAGADLVLAETPSNPGLDVCDLA 152 (366)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH---HhccCceEEEEECCCCCCCCccCHH
Confidence 456 455568899999999999998887555445567899999999865432 3346899999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhh
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 160 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (307)
+|.++|+++|+++++|++|+.+....+.++++|++++|++|+++|++|+++|+++++++.+.+.+.......+..+++..
T Consensus 153 ~I~~~a~~~g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~ 232 (366)
T PRK07582 153 ALAAAAHAAGALLVVDNTTATPLGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFE 232 (366)
T ss_pred HHHHHHHHcCCEEEEECCCCCccccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHH
Confidence 99999999999999999997654445556789999999999999999999999998777777777777777788888999
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcC
Q 021783 161 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT 240 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (307)
+|+...+++.+..|++++.++++.+.++|+.++.+..+.+|+++++|+++++.++.++.+++++|.+++.+.+.++++.+
T Consensus 233 a~l~~r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~~~~~~~~~l 312 (366)
T PRK07582 233 AWLAHRSLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAAAAERFVAAS 312 (366)
T ss_pred HHHHHhccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999998888888999999998888899999999
Q ss_pred CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 241 KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 241 ~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
+...+.+++|+..++...+... ..+.+++.||+|+|+||.+.+++.|.++|+++
T Consensus 313 ~~~~~~~s~G~~~sl~~~~~~~-----------~~~~~~~liR~svGlE~~~dli~dl~~al~~~ 366 (366)
T PRK07582 313 RLVVAATSFGGVHTSADRRARW-----------GDAVPEGFVRLSCGIEDTDDLVADLERALDAL 366 (366)
T ss_pred CcceecccCCCccchhhhHHHc-----------CCCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 9988999999987654322111 12255789999999999999999999999764
No 44
>PLN02242 methionine gamma-lyase
Probab=100.00 E-value=5.2e-41 Score=294.18 Aligned_cols=302 Identities=30% Similarity=0.460 Sum_probs=258.8
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhh-cccCCcEEEEecCCChHHHHhhcCC-CceEEEEeCCCCCcccccc
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRV-TPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~-~~~~g~~~~~v~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~ 78 (307)
+|+ .++.+++++||+|+++++.|+.+...+... .+..|++++.++..|++++++++++ ++++|++++|+||||.+.|
T Consensus 102 ~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~d 181 (418)
T PLN02242 102 SAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAVVPGKTKVLYFESISNPTLTVAD 181 (418)
T ss_pred HHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhcCcCCCEEEEEecCCCCCCcccC
Confidence 455 566678999999999999998876554333 3458999999999999999999987 5999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH----HhcCC
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ----NAEGS 154 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~----~~~~~ 154 (307)
+++|.++|+++|+++|+|++|+... ..+..+|+|++++|+||+++++...++|+++++++.+ +.+.... ...+.
T Consensus 182 l~~I~~la~~~gi~livDea~~~~~-~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li-~~l~~~~~~~~~~~g~ 259 (418)
T PLN02242 182 IPELARIAHEKGVTVVVDNTFAPMV-LSPARLGADVVVHSISKFISGGADIIAGAVCGPAELV-NSMMDLHHGALMLLGP 259 (418)
T ss_pred HHHHHHHHHHhCCEEEEECCCCccC-CCHHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHH-HHHHHHhhhhhhccCC
Confidence 9999999999999999999996433 3555668999999999999776656689999876543 4444332 23455
Q ss_pred CCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhc---cCCCceEEEEeCCHH
Q 021783 155 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA---KGAGSVLSFLTGSLA 231 (307)
Q Consensus 155 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 231 (307)
.+++..+++...+++.+..+++++.++++.+.++|+.++ ..+.+|++.++|++.++.++. ++.|++++|.+.+.+
T Consensus 260 ~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~--~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~ 337 (418)
T PLN02242 260 TMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELG--LKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEE 337 (418)
T ss_pred CCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC--CEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHH
Confidence 677788999999999999999999999999999999985 388899999999999988766 477899999998888
Q ss_pred HHHHHHhcCCcc----eeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCC-hHHHHHHHHHHHhcCC
Q 021783 232 LSKHVVETTKYF----SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED-VNDLISDLDKALRTGP 306 (307)
Q Consensus 232 ~~~~~~~~l~~~----gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~-~~~~i~~l~~~l~~~~ 306 (307)
.+..|++.++.. .+.++.|+..++.++|...+|..++.+.+...|.+++.+|||+|+|+ .+.+++.|.++|+++.
T Consensus 338 ~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~~dli~dl~~al~~~~ 417 (418)
T PLN02242 338 RANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGYTGTLEQRWSQFEKALSAMK 417 (418)
T ss_pred HHHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecCCCCHHHHHHHHHHHHHHhh
Confidence 899999999865 77899999999999999999999999888899999999999999995 9999999999999875
Q ss_pred C
Q 021783 307 L 307 (307)
Q Consensus 307 ~ 307 (307)
|
T Consensus 418 ~ 418 (418)
T PLN02242 418 L 418 (418)
T ss_pred C
Confidence 4
No 45
>PRK05968 hypothetical protein; Provisional
Probab=100.00 E-value=9.7e-41 Score=291.16 Aligned_cols=297 Identities=34% Similarity=0.556 Sum_probs=256.6
Q ss_pred CcHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+ .++.++++|||+|+++.+.|.+....+...++..|+++++++.+|++++++.+ ++|++|++++|+|+++...|+
T Consensus 88 ~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl 166 (389)
T PRK05968 88 MAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVAKAL-PGAKLLYLESPTSWVFELQDV 166 (389)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHHHhc-ccCCEEEEECCCCCCCcHHHH
Confidence 3456 45566889999999999999988877777788899999999999999999998 678999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH-HHHhcCCCCCh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-LQNAEGSGLAP 158 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~ 158 (307)
++|.++|+++|+++|+|++|+.+....+..+|+|+++.|++|+++|++++++|+++.+++.+ +.+.. .....+..+++
T Consensus 167 ~~i~~la~~~gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~-~~l~~~~~~~~g~~~~~ 245 (389)
T PRK05968 167 AALAALAKRHGVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHI-ARINAEAYPYLGAKLSP 245 (389)
T ss_pred HHHHHHHHHcCCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEECHHHH-HHHHHHHHHhCCCCCCh
Confidence 99999999999999999999988765566779999999999999888777899998776544 33333 33345677888
Q ss_pred hhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHh
Q 021783 159 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVE 238 (307)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (307)
..+++...+++.+..|+++..++++.+.++|+.++.+..+.+|++.++|.. ...+.+++++|.+++.....+|.+
T Consensus 246 ~~A~~~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~-----~~~g~g~~~sf~~~~~~~~~~f~~ 320 (389)
T PRK05968 246 FEAWLLLRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPA-----GLSGTSGLFSFIFREGIDVRAFAD 320 (389)
T ss_pred HHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHH-----hCCCCceEEEEEECCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999888732 234568899999975556899999
Q ss_pred cCCcceeecCCCCccceeecccccCCCC-CcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHAS-IPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
.|+..++.+++|..+++.+ |...+|.. .+.+.+...|.+++.+|+|+|+||.+.+++.|.++|++.
T Consensus 321 ~L~~~~~~~s~G~~~slv~-p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 321 ALKLFRLGVSWGGHESLVV-PAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAAA 387 (389)
T ss_pred hCCccEEecCCCCCCceee-eCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHHh
Confidence 9999999999999999888 87777766 447777788999999999999999999999999999865
No 46
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=2.1e-40 Score=285.80 Aligned_cols=285 Identities=42% Similarity=0.712 Sum_probs=250.5
Q ss_pred CcHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 1 MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 1 ~aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
|+|+.+++.++++||+|+++.+.|......+.......+.++.+. .|+++++++++++|++|++++|+||+|.+.|++
T Consensus 79 ~aAi~~~l~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~--~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~ 156 (364)
T PRK07269 79 MSAIVLAFSVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYA--NTEEELIAAIEEDTDIVYIETPTNPLMVEFDIE 156 (364)
T ss_pred HHHHHHHHHHhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEec--CCHHHHHHhcCcCceEEEEECCCCCCCeeeCHH
Confidence 466655556789999999999999887754444434345544443 489999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhh
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 160 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (307)
+|+++|+++|+++++|++|+.+....+...|+|+++.|++|+++|+..+.+|+++++++.+.+.+.......|..+++..
T Consensus 157 ~I~~la~~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~ 236 (364)
T PRK07269 157 KVAKLAHAKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFD 236 (364)
T ss_pred HHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHH
Confidence 99999999999999999998887666777899999999999999888888999999877777767666666677889999
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcC
Q 021783 161 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT 240 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (307)
+|+...+++++..|++++.++++.+.++|+.++.+..+.+|+ .+++++|.+.+.+.+.++++.+
T Consensus 237 a~l~~~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg----------------~gg~~sf~~~~~~~~~~f~~~l 300 (364)
T PRK07269 237 SYLLMRGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG----------------KGGMISFKVADETRIPHILNSL 300 (364)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC----------------cCcEEEEEECCHHHHHHHHHhC
Confidence 999999999999999999999999999999999888888875 3889999998777789999999
Q ss_pred CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 241 KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 241 ~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
+...++++.|...++..+|...+|..++.+.+...|..++.||+|+|+||.+.+++.|.++|+
T Consensus 301 ~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGlE~~~dli~dl~~al~ 363 (364)
T PRK07269 301 KVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIEDARDLIADLKQALE 363 (364)
T ss_pred CcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999998888999999999999999999999999999986
No 47
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=2.4e-40 Score=287.09 Aligned_cols=289 Identities=45% Similarity=0.745 Sum_probs=257.1
Q ss_pred CcHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 1 MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 1 ~aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
|+|+.+++.++++||+|+++++.|++....+...++..|++++.++..|+++++++++++|++|++++|+||+|...+++
T Consensus 77 ~~ai~~~~~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~ 156 (366)
T PRK08247 77 MAAIQLVMSLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAIEQAITPNTKAIFIETPTNPLMQETDIA 156 (366)
T ss_pred HHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHHHHHhcccCceEEEEECCCCCCCcHHHHH
Confidence 45676666788999999999999998877777777889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhh
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 160 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (307)
+|.++|+++|+++|+|++|+.+....+...++|+++.|++|+++|++++++|+++.+++.+.+.+...+...+..+++..
T Consensus 157 ~I~~la~~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~ 236 (366)
T PRK08247 157 AIAKIAKKHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFD 236 (366)
T ss_pred HHHHHHHHcCCEEEEECCCccccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHH
Confidence 99999999999999999998777666666789999999999999888889999998766676767666666777788889
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcC
Q 021783 161 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT 240 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (307)
+++...+++.+..+++++.++++.+.++|+.++.+..+.+|+ .+++++|.+++.+...++++.+
T Consensus 237 a~l~~~~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~----------------~gg~~sf~~~~~~~~~~~~~~l 300 (366)
T PRK08247 237 SWLLIRGMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPG----------------RGGMLSFRLQDEEWVNPFLKSL 300 (366)
T ss_pred HHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCC----------------cCcEEEEEECCHHHHHHHHHcC
Confidence 999999999999999999999999999999998776666653 3789999988777778899999
Q ss_pred CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 241 KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 241 ~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
+...++++.|...++...|...+|..++.+.+...|..++.+|+|+|+|+.+.+++.|.++|+++
T Consensus 301 ~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGlE~~~dl~~dl~~al~~~ 365 (366)
T PRK08247 301 KLITFAESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGIENVEDLIADLKQAFKQV 365 (366)
T ss_pred CcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhc
Confidence 99899999999989899998888888998888889999999999999999999999999999864
No 48
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.8e-34 Score=247.70 Aligned_cols=267 Identities=27% Similarity=0.344 Sum_probs=199.4
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
+++||+|++++.+|++...+|+.++++.|++++++|.+ ++++++..++++||+|.+++.+|.||.+.|+++|.++
T Consensus 108 ~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I~~l 187 (405)
T COG0520 108 LKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAEL 187 (405)
T ss_pred hcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCCceEEEEECccccccccchHHHHHHH
Confidence 68999999999999999999999999999999999974 6899999999999999999999999999999999999
Q ss_pred HHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH----------------
Q 021783 86 AHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL---------------- 148 (307)
Q Consensus 86 ~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~---------------- 148 (307)
||++|+++++|++|+.|+.+ +..++|+|++++|.|||+.||.| +|+++++++.+.+.....
T Consensus 188 a~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~G--iGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~ 265 (405)
T COG0520 188 AHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTG--IGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVT 265 (405)
T ss_pred HHHcCCEEEEECccccCccCCCchhcCCCEEEEcccccccCCCc--eEEEEEchHHHhhcCCcccCCCceeeeccccccc
Confidence 99999999999999999998 89999999999999998889999 999999988665542211
Q ss_pred -----HHhcCCCCChhhHHHHhhccccHH-HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCce
Q 021783 149 -----QNAEGSGLAPFDCWICLRGVKTMA-LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 222 (307)
Q Consensus 149 -----~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 222 (307)
......++..........+++.+. ..++++.+..+.+.+++. ..+.+.|++++..++...+.++
T Consensus 266 ~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~----------~~L~~~~~v~i~g~~~~~r~~~ 335 (405)
T COG0520 266 LAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLL----------EGLSELPGVEIYGPPDADRGGI 335 (405)
T ss_pred ccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHH----------HHHhcCCCeEEecCCcccCceE
Confidence 011111122222222222332221 113334444444444332 2233344444443332346899
Q ss_pred EEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHH
Q 021783 223 LSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 302 (307)
Q Consensus 223 ~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l 302 (307)
++|.+++.. ..++...|..+||.++.|.+ |..|. .. ..+ -++.+|+|++..+++++++.|.++|
T Consensus 336 vsF~v~~~~-~~dv~~~L~~~gI~vr~g~~---ca~p~-~~----------~~~-~~~~iR~S~~~YNt~edid~l~~aL 399 (405)
T COG0520 336 VSFNVKGIH-PHDVATLLDEKGIAVRAGHH---CAQPL-HR----------LLG-VDATIRASLHLYNTEEDVDRLLEAL 399 (405)
T ss_pred EEEEeCCCC-HHHHHHHHHhCCeEEEeccc---cccHH-HH----------hcC-CCCceEEEEeecCCHHHHHHHHHHH
Confidence 999998875 88899999999999999998 44442 11 122 2444999999988888888888888
Q ss_pred hcC
Q 021783 303 RTG 305 (307)
Q Consensus 303 ~~~ 305 (307)
++.
T Consensus 400 ~~~ 402 (405)
T COG0520 400 KKA 402 (405)
T ss_pred HHH
Confidence 754
No 49
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.98 E-value=1.5e-30 Score=226.32 Aligned_cols=261 Identities=21% Similarity=0.197 Sum_probs=188.0
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC--------ChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--------d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
|+ .+++++++|||+|++++|.|+++. ...+..|++++.++.. |+++++++++++||+|++++|||||
T Consensus 101 al~~~~~a~~~pGDeVlip~P~Y~~y~----~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPT 176 (393)
T COG0436 101 ALFLAFLALLNPGDEVLIPDPGYPSYE----AAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPT 176 (393)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCcCHH----HHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCc
Confidence 55 566779999999999999999998 7788899999999851 6899999999999999999999999
Q ss_pred ccccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----C----CccCCCccEEEeccccccccCCCceeEEEEEcChhH
Q 021783 74 QQICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----S----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 74 G~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~----~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
|.+++ +++|+++|++||+++|.|++|..-.+ . ......+.+.+.|+||.+ +.+|.|+||++++++.+
T Consensus 177 Gav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~-~mtGwRvG~~v~~~~~l 255 (393)
T COG0436 177 GAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTY-GMTGWRIGWVVGPPEEL 255 (393)
T ss_pred CcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccc-cccccceeEeecChHHH
Confidence 99996 89999999999999999999962211 1 111135789999999999 78999999999996667
Q ss_pred HHHHHHHHHhcCCCCChhhHHHHhhccccH------HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhh
Q 021783 142 AKELYFLQNAEGSGLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 215 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 215 (307)
.+.+...........+...+..+..+++.- +...+...++++.+.+.+.+..++ .++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~--------------~~~~~- 320 (393)
T COG0436 256 IAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGL--------------SVVKP- 320 (393)
T ss_pred HHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCe--------------eeccC-
Confidence 676666666666666666676666666422 222244566666677666655322 11110
Q ss_pred ccCCCceEEEEeCCHHHHHHHHhc-CCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChH
Q 021783 216 AKGAGSVLSFLTGSLALSKHVVET-TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVN 292 (307)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~-l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~ 292 (307)
+ ..+.+++..++...+..+|... +++.||.|.+|..|... .+++++|+|+.. ++++
T Consensus 321 p-~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~--------------------~g~~~vRis~~~~~~~l~ 379 (393)
T COG0436 321 P-EGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEP--------------------PGEGYVRLSLATSEETLE 379 (393)
T ss_pred C-CeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCC--------------------CCCCeEEEEEecCHHHHH
Confidence 1 1234444555432224444444 45568999999874421 247899999976 5666
Q ss_pred HHHHHHHHHHhc
Q 021783 293 DLISDLDKALRT 304 (307)
Q Consensus 293 ~~i~~l~~~l~~ 304 (307)
+.++++.+.++.
T Consensus 380 ~a~~rl~~~~~~ 391 (393)
T COG0436 380 EALRRLARFLAE 391 (393)
T ss_pred HHHHHHHHHHHh
Confidence 667777766654
No 50
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.97 E-value=1.2e-30 Score=218.58 Aligned_cols=265 Identities=22% Similarity=0.205 Sum_probs=192.9
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHH
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 86 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~ 86 (307)
+.|.+|+++..+|+++...+..+ +..|.++.++|.+ |+++|+++++++|.+|.+.+.||.+|.+.|+++|.++|
T Consensus 89 ~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~ 167 (386)
T COG1104 89 QKGKHIITSAIEHPAVLNTCRYL-ERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEIC 167 (386)
T ss_pred cCCCeEEEcccccHHHHHHHHHH-HhcCCeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHH
Confidence 36889999999999999888776 7889999999986 89999999999999999999999999999999999999
Q ss_pred HHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCC----CCChh-h
Q 021783 87 HAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS----GLAPF-D 160 (307)
Q Consensus 87 ~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~ 160 (307)
+++++++++|++|+.|..+ +...+++|+++.|.||.. ||.| +|+++.++......+.....+... +.... .
T Consensus 168 k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~-GpkG--iGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~I 244 (386)
T COG1104 168 KERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFG-GPKG--IGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGI 244 (386)
T ss_pred HHcCCeEEEehhhhcCceeccccccCcceEEeehhhcc-CCCc--eEEEEECCCCccCceeccCcCCCCCCCCCccHHHH
Confidence 9999999999999999998 888889999999999988 8999 999999765433333322222211 11111 1
Q ss_pred HHHHh---hccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHH
Q 021783 161 CWICL---RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVV 237 (307)
Q Consensus 161 ~~~~~---~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (307)
..+.. -+.+.+....+++....+++.+.+.... |++.+........++++.|.+++.+ .+.++
T Consensus 245 vg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~-------------p~~~~~g~~~~rlP~~~~~~f~gv~-gE~ll 310 (386)
T COG1104 245 VGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEII-------------PDVYLNGDDEPRLPNILNFSFPGVE-GESLL 310 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------CcEEEcCCcccCCCCeEEEEeCCCc-HHHHH
Confidence 11111 1122223333333444444555554331 2222221122335678899999887 99999
Q ss_pred hcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCC----CeEEEEeccCChHHHHHHHHHHH
Q 021783 238 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE----DLVRISVGIEDVNDLISDLDKAL 302 (307)
Q Consensus 238 ~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~~iRis~~~~~~~~~i~~l~~~l 302 (307)
..|...||.++.|+.|+ .....+++++.++|.++ +.||+|++..+.++.++.+.+.+
T Consensus 311 ~~L~~~gI~vStGSACs--------S~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l 371 (386)
T COG1104 311 LALDLAGIAVSTGSACS--------SGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEAL 371 (386)
T ss_pred HhccccCeEEecccccc--------CCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHH
Confidence 99999999999999833 22335788999999864 99999999855555554444443
No 51
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.97 E-value=4.5e-29 Score=220.57 Aligned_cols=260 Identities=17% Similarity=0.163 Sum_probs=181.1
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
.+++||+|++++++|++....|...++..|++++.++.+ |+++++++++++|++|++++++||||.+.|+++|.+
T Consensus 109 ~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~~~~i~~ 188 (406)
T PRK09295 109 NVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTENPLAEMIA 188 (406)
T ss_pred cCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCCcEEEEEecchhcccccCCHHHHHH
Confidence 468999999999999998888888888899999999863 789999999989999999999999999999999999
Q ss_pred HHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH---------------
Q 021783 85 MAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--------------- 148 (307)
Q Consensus 85 ~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~--------------- 148 (307)
+|+++|+++++|++|+.|..+ +...+++|++++|+||.+ ||+| .|+++++++.........
T Consensus 189 ~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~-gp~G--~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 265 (406)
T PRK09295 189 LAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLY-GPTG--IGILYVKEALLQEMPPWEGGGSMIATVSLTEGT 265 (406)
T ss_pred HHHHcCCEEEEEcccccCccccCchhcCCCEEEeehhhcc-CCCC--cEEEEEchHhHhhCCCcccCCceeeeeecCCcc
Confidence 999999999999999988876 666789999999999966 7888 899999876433211100
Q ss_pred ------HHhcCCCCChhhHHHHhhccccHHH-HHHHHHH----HHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhcc
Q 021783 149 ------QNAEGSGLAPFDCWICLRGVKTMAL-RVEKQQD----NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 217 (307)
Q Consensus 149 ------~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~----~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (307)
.+...++.+......+..+++.+.. .++++.+ ..+.+.+.+++.+. +++..+ .
T Consensus 266 ~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~--------------~~~~~~--~ 329 (406)
T PRK09295 266 TWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPD--------------LTLYGP--Q 329 (406)
T ss_pred ccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC--------------EEEeCC--C
Confidence 0011112222222233333332221 1223333 33344444443332 222211 1
Q ss_pred CCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHH
Q 021783 218 GAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISD 297 (307)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~ 297 (307)
...+++.|.+++.. ..++.+.|..+||.++.|..+. .+ .....+. ++++|+|++..+.+++++.
T Consensus 330 ~~~~iv~~~~~~~~-~~~~~~~L~~~gI~v~~g~~c~---~~-----------~~~~~~~-~~~iRiS~~~ynt~~did~ 393 (406)
T PRK09295 330 NRLGVIAFNLGKHH-AYDVGSFLDNYGIAVRTGHHCA---MP-----------LMAYYNV-PAMCRASLAMYNTHEEVDR 393 (406)
T ss_pred CCceEEEEEECCcC-HHHHHHHHHhCCeEEeccccch---HH-----------HHHHHCC-CCEEEEEccCCCCHHHHHH
Confidence 13578899887644 5567777888999999988632 11 1112232 4679999998777777777
Q ss_pred HHHHHhc
Q 021783 298 LDKALRT 304 (307)
Q Consensus 298 l~~~l~~ 304 (307)
|.++|++
T Consensus 394 l~~~l~~ 400 (406)
T PRK09295 394 LVAGLQR 400 (406)
T ss_pred HHHHHHH
Confidence 7777754
No 52
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.97 E-value=3.8e-28 Score=213.26 Aligned_cols=258 Identities=16% Similarity=0.152 Sum_probs=177.5
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCcccccc-
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICD- 78 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~- 78 (307)
.++.+++++||+|++++|+|..+. ..++..|++++.++.+ |++++++.++++++++++++|+||||.+++
T Consensus 104 ~~~~~~~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~ 179 (389)
T PRK05957 104 NAILAITDPGDEIILNTPYYFNHE----MAITMAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPE 179 (389)
T ss_pred HHHHHhcCCCCEEEEeCCCCcCHH----HHHHhcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCH
Confidence 344557899999999999998876 4456789999998874 789999999889999999999999999997
Q ss_pred --HHHHHHHHHHcCCEEEEeCccCCCCc------C---CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH
Q 021783 79 --IRKIAEMAHAHGALLLVDNSIMSPVL------S---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 147 (307)
Q Consensus 79 --~~~l~~~~~~~~~~li~D~a~~~~~~------~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~ 147 (307)
+++|+++|+++|+++|+|++|+.... . .....+..+++.|+||.+ |.+|+|.||++++++ +.+.+..
T Consensus 180 ~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~~-~~~~~~~ 257 (389)
T PRK05957 180 ALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAY-GFASWRIGYMVIPIH-LLEAIKK 257 (389)
T ss_pred HHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhc-cCccceeEEEecCHH-HHHHHHH
Confidence 88999999999999999999862211 1 112334679999999999 778999999999754 5555555
Q ss_pred HHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceE
Q 021783 148 LQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 223 (307)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 223 (307)
.........+...+..+...++. +....+.+.++.+.+.+.|+..+.+.. +. + ...+.++
T Consensus 258 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~--------------~~-~-~~gg~~~ 321 (389)
T PRK05957 258 IQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCT--------------LH-P-ANGAFYC 321 (389)
T ss_pred HHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCcc--------------cc-C-CCeeEEE
Confidence 55443333444455554444432 333344455555556666654321100 00 1 1134566
Q ss_pred EEEeCCHHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc---CChHHHHHHHH
Q 021783 224 SFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLD 299 (307)
Q Consensus 224 ~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~ 299 (307)
++++++..+..++.+.+. ..||.+.+|..|.. ..++++|||++. +++++.++.|.
T Consensus 322 ~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRis~~~~~~~~l~~~~~~l~ 380 (389)
T PRK05957 322 FLKVNTDLNDFELVKQLIREYRVAVIPGTTFGM---------------------KNGCYLRIAYGALQKATAKEGIERLV 380 (389)
T ss_pred EEeCCCCCChHHHHHHHHHHCCEEEccchhhCC---------------------CCCCEEEEEEecCCHHHHHHHHHHHH
Confidence 777754334667777764 57999999886421 024689999985 34566667776
Q ss_pred HHHhcC
Q 021783 300 KALRTG 305 (307)
Q Consensus 300 ~~l~~~ 305 (307)
+.++++
T Consensus 381 ~~~~~~ 386 (389)
T PRK05957 381 QGLKTI 386 (389)
T ss_pred HHHHhh
Confidence 666543
No 53
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=9.7e-29 Score=218.02 Aligned_cols=256 Identities=19% Similarity=0.160 Sum_probs=172.4
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
+++||+|++++++|++....+...++..|++++.++.+ |++++++.++++|+++++++++||||.+.|+++|.++
T Consensus 103 ~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~~ 182 (398)
T TIGR03392 103 LQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPRTRILALGQMSNVTGGCPDLARAITL 182 (398)
T ss_pred CCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccCceEEEEECccccccccCCHHHHHHH
Confidence 48999999999999987777777788899999999863 7899999999999999999999999999999999999
Q ss_pred HHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH----------------
Q 021783 86 AHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL---------------- 148 (307)
Q Consensus 86 ~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~---------------- 148 (307)
|+++|+++++|++|+.+..+ +...+++|++++|+||.+ ||+| .|+++++++.+.......
T Consensus 183 ~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~-gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (398)
T TIGR03392 183 AHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLY-GPTG--IGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIP 259 (398)
T ss_pred HHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEeccccc-CCCc--eEEEEEcHHHHhhCCCeecCCceEeecccccccc
Confidence 99999999999999887765 556678999999999977 7888 899998866443221110
Q ss_pred ----HHhcCCCCChhhHHHHhhccccHH-----HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 149 ----QNAEGSGLAPFDCWICLRGVKTMA-----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 149 ----~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
.+...++...........+++.+. ...+...+..+.+.+.++..+.+ ++...+ .
T Consensus 260 ~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~--------------~~~~~~---~ 322 (398)
T TIGR03392 260 QAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGF--------------RSFRCP---G 322 (398)
T ss_pred CCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCe--------------EEeCCC---C
Confidence 001111122112222223333221 11222233334444444433322 111111 2
Q ss_pred CceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHH
Q 021783 220 GSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 299 (307)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~ 299 (307)
+++++|.+++.+ ...+.+.|..+||.++.|..++. + .....|. ++++|+|++..++++.++.|.
T Consensus 323 ~~i~~~~~~~~~-~~~l~~~L~~~gI~v~~g~~~~~---~-----------~~~~~g~-~~~iRvS~~~~~t~~ei~~l~ 386 (398)
T TIGR03392 323 SSLLAFDFAGVH-HSDLAALLAESGIALRAGQHCAQ---P-----------LMAALGV-SGTLRASFAPYNTQQDVDALV 386 (398)
T ss_pred CcEEEEEeCCcC-HHHHHHHHHhCCEEEecCccchH---H-----------HHHHhCC-CCEEEEEeeccCCHHHHHHHH
Confidence 568888887654 56788888889999999886331 1 1112222 468999998744444444444
Q ss_pred HHH
Q 021783 300 KAL 302 (307)
Q Consensus 300 ~~l 302 (307)
++|
T Consensus 387 ~~l 389 (398)
T TIGR03392 387 DAV 389 (398)
T ss_pred HHH
Confidence 444
No 54
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=3.1e-28 Score=214.97 Aligned_cols=256 Identities=20% Similarity=0.179 Sum_probs=173.7
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
+++||+|++++++|++....|...++..|++++.++.+ |++++++.++++|+++++++++||||.+.|+++|.++
T Consensus 106 ~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~l 185 (401)
T PRK10874 106 LQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITPRTRILALGQMSNVTGGCPDLARAITL 185 (401)
T ss_pred CCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCCHHHHHHH
Confidence 47999999999999988777878888999999999863 7899999999999999999999999999999999999
Q ss_pred HHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH----------------
Q 021783 86 AHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL---------------- 148 (307)
Q Consensus 86 ~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~---------------- 148 (307)
|+++|+++++|++|+.+..+ +...+++|++++|+||++ ||+| .|+++++++.+.......
T Consensus 186 ~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~-gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (401)
T PRK10874 186 AHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLY-GPTG--IGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTP 262 (401)
T ss_pred HHHcCCEEEEECCcccccccCCchhcCCCEEEEeccccc-CCCc--cEEEEEchHHHhcCCCeecCCcceEeeccCccCC
Confidence 99999999999999987765 556678999999999977 7888 799999866443211110
Q ss_pred ----HHhcCCCCChhhHHHHhhccccHHH-----HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 149 ----QNAEGSGLAPFDCWICLRGVKTMAL-----RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 149 ----~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
.....++.+.........+++.+.. ..++..+..+.+.+.+++.+++ ++..+ ..
T Consensus 263 ~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~--------------~~~~~---~~ 325 (401)
T PRK10874 263 QSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGF--------------RSFRC---QD 325 (401)
T ss_pred CCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE--------------EEeCC---CC
Confidence 0011111221222233333332211 1222233344444444443322 11111 12
Q ss_pred CceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHH
Q 021783 220 GSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 299 (307)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~ 299 (307)
+++++|.+++.. ..++.+.|..+||.++.|..++. + .....| ..+++|+|++..+.++.++.|.
T Consensus 326 ~~i~~~~~~~~~-~~~~~~~L~~~gI~v~~g~~~~~---~-----------~~~~~g-~~~~iRiS~~~~nt~edid~ll 389 (401)
T PRK10874 326 SSLLAFDFAGVH-HSDLVTLLAEYGIALRAGQHCAQ---P-----------LLAALG-VTGTLRASFAPYNTQSDVDALV 389 (401)
T ss_pred CcEEEEEECCcC-HHHHHHHHHHCCcEEeccccchH---H-----------HHHHhC-CCCEEEEEecccCCHHHHHHHH
Confidence 568888887654 56777888889999998876321 1 111223 2478999999644444444444
Q ss_pred HHH
Q 021783 300 KAL 302 (307)
Q Consensus 300 ~~l 302 (307)
++|
T Consensus 390 ~al 392 (401)
T PRK10874 390 NAV 392 (401)
T ss_pred HHH
Confidence 444
No 55
>PRK07324 transaminase; Validated
Probab=99.96 E-value=5.4e-28 Score=210.94 Aligned_cols=254 Identities=20% Similarity=0.188 Sum_probs=175.5
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
.++.+++++||+|+++.|+|+.+. ..++..|++++.++.+ |++++++.++++++++++++|+||||.++
T Consensus 95 ~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~ 170 (373)
T PRK07324 95 LVLYALVEPGDHVISVYPTYQQLY----DIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALM 170 (373)
T ss_pred HHHHHhCCCCCEEEEcCCCchhHH----HHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCC
Confidence 455567899999999999998877 6677889999999863 68899998888999999999999999999
Q ss_pred c---HHHHHHHHHHcCCEEEEeCccCCCCc----CC-ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 78 D---IRKIAEMAHAHGALLLVDNSIMSPVL----SR-PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 78 ~---~~~l~~~~~~~~~~li~D~a~~~~~~----~~-~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
+ +++|+++|++||+++|+|++|..-.. +. ....+..++++|+||.+ |.+|+|+||++++ +.+.+.+....
T Consensus 171 ~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~-~~~G~RiG~i~~~-~~li~~~~~~~ 248 (373)
T PRK07324 171 DRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTY-SLPGIRVGWIAAN-EEVIDILRKYR 248 (373)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhc-CCccceeEEEecC-HHHHHHHHHHh
Confidence 8 88999999999999999999863221 11 11234679999999999 6789999999996 55656566555
Q ss_pred HhcCCCCChhhHHHHhhccccHH----HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEE
Q 021783 150 NAEGSGLAPFDCWICLRGVKTMA----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 225 (307)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 225 (307)
.......+...+.++...++... ...+...++.+.+.+.+++++.+. .. .+. .+..+++
T Consensus 249 ~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~---------------~p~-gg~~~~i 311 (373)
T PRK07324 249 DYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVS-YV---------------KPK-AVSTSFV 311 (373)
T ss_pred CcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EE---------------CCC-ceEEEEE
Confidence 54433444455555555554322 222333445555556565443221 11 111 2344455
Q ss_pred EeCCHHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHH
Q 021783 226 LTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKAL 302 (307)
Q Consensus 226 ~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l 302 (307)
.++......++.+++ ++.||.+.+|..|. .++++|||++. +.+++.+++|.+.+
T Consensus 312 ~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~-----------------------~~~~iRis~~~~~~~l~~~l~rl~~~l 368 (373)
T PRK07324 312 KLDVDMPSEDFCLKLLKETGVLLVPGNRFD-----------------------LEGHVRIGYCCDTETLKKGLKKLSEFL 368 (373)
T ss_pred EeCCCCCHHHHHHHHHHhcCEEEECccccC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 554322356676665 56799999988642 14579999985 55666677777776
Q ss_pred hc
Q 021783 303 RT 304 (307)
Q Consensus 303 ~~ 304 (307)
++
T Consensus 369 ~~ 370 (373)
T PRK07324 369 RE 370 (373)
T ss_pred Hh
Confidence 54
No 56
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.96 E-value=6.1e-28 Score=212.76 Aligned_cols=259 Identities=18% Similarity=0.153 Sum_probs=178.5
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----------ChHHHHhhcCCCceEEEEeCCCC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----------DLDEVASAIGPWTKLVWVESPTN 71 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----------d~~~l~~~l~~~~~~v~~~~~~n 71 (307)
++ .++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |+++++++++++++++++++|+|
T Consensus 114 al~~~~~~l~~~Gd~Vlv~~P~y~~~~----~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~N 189 (405)
T PRK06207 114 ALFLAVAATVARGDKVAIVQPDYFANR----KLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNN 189 (405)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCchhHH----HHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCC
Confidence 44 345567899999999999998877 6677889999888753 78899999888899999999999
Q ss_pred Ccccccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----CCc----cCCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 72 PRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----SRP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 72 ~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~----~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
|||.+++ +++|+++|++||++||+|++|+...+ ... ...+..++++||||.+ +.+|+|+||++++++
T Consensus 190 PTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~-~lpGlRiG~ii~~~~ 268 (405)
T PRK06207 190 PAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTE-SLSGYRLGVAFGSPA 268 (405)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhc-cCcccceEEEEcCHH
Confidence 9999997 78899999999999999999974221 111 1235679999999999 667999999998754
Q ss_pred hHHHHHHHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhh
Q 021783 140 RLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 215 (307)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 215 (307)
+.+.+...........+...+..+...++. +..+.+...++.+.+.+.+++.+.+ .+. .
T Consensus 269 -l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~--------------~~~--~ 331 (405)
T PRK06207 269 -IIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGV--------------FVR--A 331 (405)
T ss_pred -HHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCc--------------eec--C
Confidence 555555544443333333444444444422 3344445555555565555543211 110 1
Q ss_pred ccCCCceEEEEeCCH-HHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CCh
Q 021783 216 AKGAGSVLSFLTGSL-ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDV 291 (307)
Q Consensus 216 ~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~ 291 (307)
...+.++|+.++.. ....++.+.+. ..||.+.+|..|.. ..++++|||++. +++
T Consensus 332 -p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~---------------------~~~~~~Ris~~~~~~~l 389 (405)
T PRK06207 332 -PQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSP---------------------HTADSIRLNFSQDHAAA 389 (405)
T ss_pred -CCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCC---------------------CCCCeEEEEecCCHHHH
Confidence 11356777777542 23567777775 67999999876421 125689999986 556
Q ss_pred HHHHHHHHHHHhcC
Q 021783 292 NDLISDLDKALRTG 305 (307)
Q Consensus 292 ~~~i~~l~~~l~~~ 305 (307)
++.+++|.+++++.
T Consensus 390 ~~al~rl~~~l~~~ 403 (405)
T PRK06207 390 VAAAERIAQLIERY 403 (405)
T ss_pred HHHHHHHHHHHHHh
Confidence 66677777776553
No 57
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=1.4e-28 Score=218.58 Aligned_cols=261 Identities=21% Similarity=0.228 Sum_probs=177.1
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
.+++||+|++++++|++....|...++..|++++.++.+ |++++++.+++++++|++++++||||.+.|+++|.+
T Consensus 118 ~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~ 197 (424)
T PLN02855 118 NLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVH 197 (424)
T ss_pred cCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHH
Confidence 368999999999999988888888888899999999863 789999999989999999999999999999999999
Q ss_pred HHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH---------------
Q 021783 85 MAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--------------- 148 (307)
Q Consensus 85 ~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~--------------- 148 (307)
+|+++|+++++|++|+.|..+ +..++++|++++|+||++ ||+| .|+++++++.+.......
T Consensus 198 l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~-gp~G--~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~ 274 (424)
T PLN02855 198 WAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKMC-GPTG--IGFLWGKSDLLESMPPFLGGGEMISDVFLDHST 274 (424)
T ss_pred HHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeeccccc-CCCc--cEEEEEchhhhhcCCCEecCCCceeeeecCccc
Confidence 999999999999999988766 666778999999999965 7888 899999866443211110
Q ss_pred -----HHhcCCCCChhhHHHHhhccccHHH-HHHHHHH----HHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhh---
Q 021783 149 -----QNAEGSGLAPFDCWICLRGVKTMAL-RVEKQQD----NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ--- 215 (307)
Q Consensus 149 -----~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~----~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~--- 215 (307)
.+...++...........+++.+.. .++++.+ ..+.+.+.+++.+++ ++..+.
T Consensus 275 ~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~--------------~i~~~~~~~ 340 (424)
T PLN02855 275 YAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGV--------------RIYGPKPSE 340 (424)
T ss_pred cCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE--------------EEeCCCccc
Confidence 0011111111122222222332211 2233333 333444444443322 221111
Q ss_pred ccCCCceEEEEeCCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHH
Q 021783 216 AKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDL 294 (307)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~ 294 (307)
+..+++++.|.+++.+ ..++.+.|..+ ||.++.|.+++ .|. ....|. ++++|+|++..+.++.
T Consensus 341 ~~~r~~~v~~~~~~~~-~~~v~~~L~~~~gI~v~~g~~c~---~~~-----------~~~~g~-~~~iRiS~~~ynt~~d 404 (424)
T PLN02855 341 GVGRAALCAFNVEGIH-PTDLSTFLDQQHGVAIRSGHHCA---QPL-----------HRYLGV-NASARASLYFYNTKEE 404 (424)
T ss_pred ccCcccEEEEEECCcC-HHHHHHHhcccCCEEEechhhhh---HHH-----------HHHhCC-CCeEEEEeccCCCHHH
Confidence 1124678899887654 66788888777 99999988733 111 011232 4679999987555555
Q ss_pred HHHHHHHHh
Q 021783 295 ISDLDKALR 303 (307)
Q Consensus 295 i~~l~~~l~ 303 (307)
++.|.++|+
T Consensus 405 i~~l~~~l~ 413 (424)
T PLN02855 405 VDAFIHALK 413 (424)
T ss_pred HHHHHHHHH
Confidence 555555443
No 58
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1e-27 Score=211.32 Aligned_cols=253 Identities=13% Similarity=0.102 Sum_probs=173.0
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.+.++++++++++|+||||
T Consensus 105 al~~~~~~~~~~Gd~Vlv~~P~y~~~~----~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG 180 (399)
T PRK07681 105 GLVHLPMVYANPGDIILVPDPGYTAYE----TGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVP 180 (399)
T ss_pred HHHHHHHHhCCCCCEEEECCCCccchH----HHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcC
Confidence 44 344567899999999999999888 6677899999999863 67889888888899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----CC---cc-CCCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----SR---PL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~~---~~-~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
.+++ +++|+++|++||++||+|++|+.... .. .. ..+..++++||||.+ |.+|+|+||++++++ +.
T Consensus 181 ~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~GlRiG~~i~~~~-l~ 258 (399)
T PRK07681 181 AMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSY-SLAGSRIGYMIGNEE-IV 258 (399)
T ss_pred cCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeeccccc-CCccceeEEEecCHH-HH
Confidence 9997 78899999999999999999973221 11 11 224679999999999 678999999998754 55
Q ss_pred HHHHHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 143 KELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+.+...........+...+..+...++. ++...+.+.++.+.+.+.|+... + .+. . ..
T Consensus 259 ~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~---------------~-p~ 320 (399)
T PRK07681 259 RALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFG-W-NVD---------------K-PA 320 (399)
T ss_pred HHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-C-ccc---------------C-CC
Confidence 5555554433334444444544444432 23333344555555666665431 1 000 0 11
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCc-ceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHH
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLI 295 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i 295 (307)
.+.++++.+++.....++.+.+.. +||.+.+|..|.. ..++++|||++. +++++.+
T Consensus 321 ~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRis~~~~~~~~~~~l 379 (399)
T PRK07681 321 GSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGP---------------------HGEGFVRIALVQDEEVLQQAV 379 (399)
T ss_pred eeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCc---------------------CCCCeEEEEecCCHHHHHHHH
Confidence 366777777543335677777655 7999998876321 124689999985 3444455
Q ss_pred HHHHH
Q 021783 296 SDLDK 300 (307)
Q Consensus 296 ~~l~~ 300 (307)
+.|.+
T Consensus 380 ~~l~~ 384 (399)
T PRK07681 380 ENIRN 384 (399)
T ss_pred HHHHH
Confidence 55544
No 59
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.96 E-value=4.9e-28 Score=207.00 Aligned_cols=253 Identities=20% Similarity=0.236 Sum_probs=186.9
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC----CChHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~----~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
++.+++.+||+|+++.|+|..+. ..++..|++++.++. .|++.+.+.+.+++++|++|+||||||...+.++
T Consensus 91 l~~~~~~~gd~vl~~~Ptf~~Y~----~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~ 166 (356)
T COG0079 91 LVRAFVEPGDTVLIPEPTFSMYE----IAAQLAGAEVVKVPLKEFRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREE 166 (356)
T ss_pred HHHHhhcCCCEEEEcCCChHHHH----HHHHhcCCeEEEecccccccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHH
Confidence 44567899999999999998887 668889999999998 4788898888889999999999999999999888
Q ss_pred HHHHHHHc--CCEEEEeCccCCCCcC----CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH-HhcCC
Q 021783 82 IAEMAHAH--GALLLVDNSIMSPVLS----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAEGS 154 (307)
Q Consensus 82 l~~~~~~~--~~~li~D~a~~~~~~~----~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~-~~~~~ 154 (307)
|.+++... +.+||+||||.....+ .....++.+++.||||.| |.+|+|+||.+.+++ +.+.+.... ++..+
T Consensus 167 l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~-gLAGlRlGy~ia~~~-~i~~l~~vr~p~~v~ 244 (356)
T COG0079 167 LRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAF-GLAGLRVGYAIANPE-LIAALNKVRPPFNVS 244 (356)
T ss_pred HHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhh-hcchhceeeccCCHH-HHHHHHHhcCCCCCC
Confidence 88888765 7899999999743322 112345689999999999 789999999887755 545454444 33333
Q ss_pred CCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHH
Q 021783 155 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSK 234 (307)
Q Consensus 155 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (307)
.+....+..++..-+.++...+...+...++.+.++... +..+ + .+..+++.+++++.+ ..
T Consensus 245 ~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v-~----------------pS~aNFvlv~~~~~~-~~ 305 (356)
T COG0079 245 SPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGV-F----------------PSQANFVLVRVPDAE-AA 305 (356)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCee-c----------------CCCCcEEEEECCCcc-HH
Confidence 333322222222224456667777777888888887654 2111 1 123678888887645 67
Q ss_pred HHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhcC
Q 021783 235 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRTG 305 (307)
Q Consensus 235 ~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~~ 305 (307)
.+.+.|..+||.++.... .+..++++|||++. ++.+++++.|.+.+...
T Consensus 306 ~l~~~L~~~giivR~~~~----------------------~~~~~~~lRitvgt~een~~ll~AL~~~~~~~ 355 (356)
T COG0079 306 ALAEALLKKGILVRDCSS----------------------VGLLPGYLRITVGTPEENDRLLAALREVLKGL 355 (356)
T ss_pred HHHHHHHHCCEEEEeCCC----------------------CCCCCCeEEEEeCCHHHHHHHHHHHHHHHhcc
Confidence 888889888999986432 12347789999986 67799999999887653
No 60
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.96 E-value=1.4e-27 Score=209.46 Aligned_cols=265 Identities=16% Similarity=0.108 Sum_probs=175.6
Q ss_pred CC-CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 021783 12 GT-GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 12 ~~-gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
++ +|+|+++..+|+++...+. .++..|++++.++.+ |++++++.++++++++++++++||||.+.|+++|.++
T Consensus 87 ~~~~~~vi~~~~e~ps~~~~~~-~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~l 165 (382)
T TIGR03403 87 KGGKNHIITTEVEHPAVRATCA-FLESLGVEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEI 165 (382)
T ss_pred cCCCCEEEEcCCccHHHHHHHH-HHHHCCCEEEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHH
Confidence 45 5789999999988887764 346789999999874 7899999999899999999999999999999999999
Q ss_pred HHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH-HHH---HhcCCCCChhh
Q 021783 86 AHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY-FLQ---NAEGSGLAPFD 160 (307)
Q Consensus 86 ~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~ 160 (307)
|+++|+++++|++|+.|..+ +..++++|++++|+||++ ||+| .|++++++........ ... .....++....
T Consensus 166 a~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~-gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~ 242 (382)
T TIGR03403 166 CKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFH-GPKG--VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPY 242 (382)
T ss_pred HHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhC-CCCc--eEEEEECCCCCCCCcccCCCCCCCcccCCcChHH
Confidence 99999999999999988776 667789999999999987 7888 8999888653211100 000 00111222222
Q ss_pred HHHHhhccccHHHHH----HHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHH
Q 021783 161 CWICLRGVKTMALRV----EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHV 236 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~----~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (307)
...+..+++...... ++.....+.+.+.+++.+.+ ++..+.....++++.|.+++.+ ...+
T Consensus 243 ~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~-~~~~ 307 (382)
T TIGR03403 243 IVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDV--------------FVVGDREHRVPNTILISIKGVE-GEAM 307 (382)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCE--------------EEECCCCCCcCCEEEEEeCCCC-HHHH
Confidence 222223333222222 23333344444444433322 2221111112457777787655 6677
Q ss_pred HhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC----CCeEEEEeccCChHHHHHHHHHHHh
Q 021783 237 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 237 ~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
...|..+||.++.|+.++.. ...++.++.+.|.+ .+.+|+|++..++++.++.|.++|+
T Consensus 308 ~~~L~~~gI~v~~g~~c~~~--------~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~ 370 (382)
T TIGR03403 308 LWDLNKAGIAASTGSACASE--------DLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFK 370 (382)
T ss_pred HHhhccCCEEEEchhccCCC--------CCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHH
Confidence 77788999999998764311 11134455666653 3789999998555555555555543
No 61
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.96 E-value=3.1e-27 Score=210.24 Aligned_cols=254 Identities=16% Similarity=0.145 Sum_probs=176.9
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcCCCceEEEEe-CCCCCcccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVE-SPTNPRQQI 76 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~~~~~~v~~~-~~~n~tG~~ 76 (307)
|+ .++.++++|||+|++++|+|+.+. ..++..|++++.++.+ |++++++++++++++++++ +||||||.+
T Consensus 153 al~~~~~~l~~pgd~Vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~ 228 (431)
T PRK15481 153 AIERLLCAHLLPGDSVAVEDPCFLSSI----NMLRYAGFSASPVSVDAEGMQPEKLERALAQGARAVILTPRAHNPTGCS 228 (431)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCcHHHH----HHHHHcCCeEEeeccCCCCCCHHHHHHHHhcCCCEEEECCCCCCCCCcc
Confidence 45 345567899999999999998888 6678899999999874 6899999888788988887 999999999
Q ss_pred ccH---HHHHHHHHHc-CCEEEEeCccCCCC----cC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH
Q 021783 77 CDI---RKIAEMAHAH-GALLLVDNSIMSPV----LS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 147 (307)
Q Consensus 77 ~~~---~~l~~~~~~~-~~~li~D~a~~~~~----~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~ 147 (307)
++. ++|.++|+++ +++||+|++|+.-. .. .....+..++++||||.+ + +|+|+||++.+++ +.+.+..
T Consensus 229 ~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~-~GlRiG~~i~~~~-~~~~~~~ 305 (431)
T PRK15481 229 LSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKAL-G-PDLRLAFVASDSA-TSARLRL 305 (431)
T ss_pred CCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeecccc-C-CCceeEEEeCCHH-HHHHHHH
Confidence 985 4999999999 99999999996321 11 111235789999999999 5 6999999998755 4444443
Q ss_pred HHHhcCCCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 148 LQNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
.........+...+.++...++. +....+.+.++.+.+.+.|+... +. + .. ...+.
T Consensus 306 ~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~---------~~-------~-~~-p~gg~ 367 (431)
T PRK15481 306 RLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYG---------IA-------I-PS-PGDGL 367 (431)
T ss_pred HHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcC---------Cc-------c-cc-CCCeE
Confidence 33333233455555555555532 22233444555555666665431 10 0 01 22467
Q ss_pred eEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc---CChHHHHHHH
Q 021783 222 VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDL 298 (307)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l 298 (307)
++|+.++. ....+.+.+..+||.+.+|..|... ...+++|||++. +++++.++.|
T Consensus 368 f~~~~l~~--~~~~~~~~l~~~gV~v~pg~~f~~~--------------------~~~~~iRis~~~~~~~~i~~~~~~l 425 (431)
T PRK15481 368 NLWLPLDT--DSQATALTLAKSGWLVREGEAFGVS--------------------APSHGLRITLSTLNDAEINRLAADL 425 (431)
T ss_pred EEEEECCC--CHHHHHHHHHHCCcEEecCCccccC--------------------CCCCeEEEEcCCCChHHHHHHHHHH
Confidence 77887753 2456777777789999998874310 013579999986 5777777777
Q ss_pred HHHHh
Q 021783 299 DKALR 303 (307)
Q Consensus 299 ~~~l~ 303 (307)
.+++.
T Consensus 426 ~~~~~ 430 (431)
T PRK15481 426 HQALN 430 (431)
T ss_pred HHHhc
Confidence 77764
No 62
>PLN00175 aminotransferase family protein; Provisional
Probab=99.96 E-value=3.4e-27 Score=208.26 Aligned_cols=259 Identities=15% Similarity=0.149 Sum_probs=177.9
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~ 75 (307)
|+ .++.++++|||+|++++|.|+.+. ..++..|++++.++.+ |++++++.+.++++++++++|+||||.
T Consensus 127 al~~~~~~l~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~ 202 (413)
T PLN00175 127 AIAATILGLINPGDEVILFAPFYDSYE----ATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHNPTGK 202 (413)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCchhHH----HHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCCCCCc
Confidence 44 455567899999999999998877 5567789999999863 678999999889999999999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-------Cc-cCCCccEEEeccccccccCCCceeEEEEEcChhHHHH
Q 021783 76 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-------RP-LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 144 (307)
Q Consensus 76 ~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-------~~-~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~ 144 (307)
+++ +++|+++|++||+++|+|++|....+. .. ...+..++++||||.+ +.+|+|+||++++++ +.+.
T Consensus 203 ~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~-~~~G~RiG~~v~~~~-l~~~ 280 (413)
T PLN00175 203 MFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTF-SLTGWKIGWAIAPPH-LTWG 280 (413)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhc-cCcchheeeeEeCHH-HHHH
Confidence 985 778999999999999999999743221 11 1235789999999999 678999999999865 4444
Q ss_pred HHHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCC
Q 021783 145 LYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 220 (307)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 220 (307)
+...........+...+..+...++. +....+.+.++.+.+.+.|+... + .+ . .+ ..+
T Consensus 281 l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~-------------~--~p-~g~ 342 (413)
T PLN00175 281 VRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVG-F-KV-------------Y--PS-SGT 342 (413)
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-C-ee-------------c--CC-Cee
Confidence 55555444444555555555555532 23334455556666666666431 1 00 0 11 124
Q ss_pred ceEEEEeC--CHHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHH
Q 021783 221 SVLSFLTG--SLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLI 295 (307)
Q Consensus 221 ~~~~~~~~--~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i 295 (307)
.++++++. +.+...++.+.+ +.+||.+.+|..|... .+..++++||+++. +++++.+
T Consensus 343 ~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~------------------~~~~~~~iRls~~~~~e~l~~~~ 404 (413)
T PLN00175 343 YFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLN------------------PEDGKNLVRFAFCKDEETLRAAV 404 (413)
T ss_pred EEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCC------------------CCCCCCEEEEEEcCCHHHHHHHH
Confidence 45666653 222356676766 4569999888764210 01135789999985 4566666
Q ss_pred HHHHHHHh
Q 021783 296 SDLDKALR 303 (307)
Q Consensus 296 ~~l~~~l~ 303 (307)
++|.+.++
T Consensus 405 ~rL~~~~~ 412 (413)
T PLN00175 405 ERMKTKLK 412 (413)
T ss_pred HHHHHHHh
Confidence 66666654
No 63
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.96 E-value=1.8e-27 Score=210.44 Aligned_cols=260 Identities=23% Similarity=0.236 Sum_probs=177.4
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
+++||+|++++++|++....+..+++..|++++.++.+ |++++++.++++++++++++++|+||.+.|+++|.++
T Consensus 105 ~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~ 184 (403)
T TIGR01979 105 LKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKL 184 (403)
T ss_pred CCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHH
Confidence 57899999999999988877877888899999999863 7899999999999999999999999999999999999
Q ss_pred HHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH---------------
Q 021783 86 AHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--------------- 149 (307)
Q Consensus 86 ~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~--------------- 149 (307)
|+++|+++++|++|+.+..+ +...+++|++++|+||++ ||+| .|+++++++.... +....
T Consensus 185 ~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~-gp~G--~g~l~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~ 260 (403)
T TIGR01979 185 AHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMY-GPTG--IGVLYGKEELLEQ-MPPFLGGGEMIAEVSFEETT 260 (403)
T ss_pred HHHcCCEEEEEchhhcCccccCccccCCCEEEEeccccc-CCCC--ceEEEEchHHHhc-CCCeecCCCceeecccCccc
Confidence 99999999999999988765 666678999999999987 7888 8999998653322 21000
Q ss_pred ------HhcCCCCChhhHHHHhhccccHH-----HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhh-hcc
Q 021783 150 ------NAEGSGLAPFDCWICLRGVKTMA-----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS-QAK 217 (307)
Q Consensus 150 ------~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~ 217 (307)
+...++.+......+..+++.+. ...++..+..+.+.+.++..+.+ ++..+ .+.
T Consensus 261 ~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~--------------~~~~~~~~~ 326 (403)
T TIGR01979 261 YNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGL--------------RIYGPRDAE 326 (403)
T ss_pred cCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE--------------EEeCCCCcc
Confidence 00111122222222233333221 22233344444444445443322 11111 111
Q ss_pred CCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHH
Q 021783 218 GAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVND 293 (307)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~ 293 (307)
..++++.|.+++.+ ..++.+.|.+.||.++.|.+++ .| .....+ .++++|+|++. +|+++
T Consensus 327 ~~~~~v~~~~~~~~-~~~~~~~L~~~gI~v~~g~~~~---~~-----------~~~~~~-~~~~iRiS~~~~~t~~di~~ 390 (403)
T TIGR01979 327 DRGGIISFNVEGVH-PHDVGTILDEEGIAVRSGHHCA---QP-----------LMRRFG-VPATCRASFYIYNTEEDIDA 390 (403)
T ss_pred ccCceEEEEeCCcC-HHHHHHHHhhCCEEEcchhhhh---HH-----------HHHHhC-CCCEEEEEeccCCCHHHHHH
Confidence 24678888886544 5677888888999999887522 11 111122 24689999986 45666
Q ss_pred HHHHHHHHHhc
Q 021783 294 LISDLDKALRT 304 (307)
Q Consensus 294 ~i~~l~~~l~~ 304 (307)
+++.|++.++.
T Consensus 391 l~~~l~~~~~~ 401 (403)
T TIGR01979 391 LVEALKKVRKF 401 (403)
T ss_pred HHHHHHHHHHH
Confidence 66666555544
No 64
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.3e-27 Score=208.42 Aligned_cols=254 Identities=20% Similarity=0.208 Sum_probs=170.3
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC--------ChHHHHhhcCCCceEEEEeCCCCCcccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAIGPWTKLVWVESPTNPRQQI 76 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--------d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 76 (307)
.++..++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.++++++++++++|+||||..
T Consensus 99 ~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~ 174 (382)
T PRK06108 99 LAAQALVGPGDEVVAVTPLWPNLV----AAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWT 174 (382)
T ss_pred HHHHHhcCCCCEEEEeCCCccchH----HHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcc
Confidence 344457899999999999998877 5567889999998873 6789999888889999999999999999
Q ss_pred cc---HHHHHHHHHHcCCEEEEeCccCCCCcC---------Cc-cCCCccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 77 CD---IRKIAEMAHAHGALLLVDNSIMSPVLS---------RP-LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 77 ~~---~~~l~~~~~~~~~~li~D~a~~~~~~~---------~~-~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
++ +++|+++|+++|+++|+|++|+..... .. ...+.+++++|+||.+ |.+|+|+||++++++ +.+
T Consensus 175 ~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~~~~~~~-~~~ 252 (382)
T PRK06108 175 ASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNW-AMTGWRLGWLVAPPA-LGQ 252 (382)
T ss_pred cCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhc-cCcccceeeeeCCHH-HHH
Confidence 85 788999999999999999998743221 11 1124679999999999 667999999999755 444
Q ss_pred HHHHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 144 ELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
.+...........+...+..+...++. ++...+...++.+.+.+.|++.++ +.+. .+ ..
T Consensus 253 ~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--------------~~~~--~p-~~ 315 (382)
T PRK06108 253 VLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPG--------------VEVA--KP-DG 315 (382)
T ss_pred HHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCC--------------Cccc--CC-Ce
Confidence 444443333333444444444444432 233334444444555555544321 1111 11 12
Q ss_pred CceEEEEeCCHHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHH
Q 021783 220 GSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLIS 296 (307)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~ 296 (307)
+.++++.+++.....++.+.+ +.+||.+.+|..|.. ..++++|+|++. +++++.++
T Consensus 316 g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~---------------------~~~~~~Ris~~~~~~~l~~~l~ 374 (382)
T PRK06108 316 AMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGP---------------------GGEGFLRWCFARDPARLDEAVE 374 (382)
T ss_pred eEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCC---------------------CCCCEEEEEecCCHHHHHHHHH
Confidence 445677776443456777766 567999988876321 125789999998 34444555
Q ss_pred HHHHHH
Q 021783 297 DLDKAL 302 (307)
Q Consensus 297 ~l~~~l 302 (307)
.|.+++
T Consensus 375 ~l~~~l 380 (382)
T PRK06108 375 RLRRFL 380 (382)
T ss_pred HHHHHH
Confidence 555544
No 65
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.96 E-value=7.3e-27 Score=205.07 Aligned_cols=241 Identities=16% Similarity=0.131 Sum_probs=165.5
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
++ .++..++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.+.++++++++++|+||||
T Consensus 103 ~l~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG 178 (383)
T TIGR03540 103 GIAHIPLAFVNPGDIVLVPDPGYPVYR----IGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTG 178 (383)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCcchH----HHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcC
Confidence 44 344557899999999999998887 5567889999988863 67888888888899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----CC---cc-CCCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----SR---PL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~~---~~-~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
.+++ +++|+++|++||+++|+|++|..... .. .. ..+.+++++||||.+ |.+|+|+||++.+++ +.
T Consensus 179 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~-g~~GlRiG~~i~~~~-l~ 256 (383)
T TIGR03540 179 AVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTY-NMTGWRIGMAVGNAD-LI 256 (383)
T ss_pred ccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEeccccc-CCccceeeEEeCCHH-HH
Confidence 9998 78999999999999999999962211 11 11 124679999999999 678999999998754 44
Q ss_pred HHHHHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 143 KELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+.+...........+...+..+...++. ++...+.+.++.+.+.+.|++.. + .+ . . ..
T Consensus 257 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~-~~-------------~--~-~~ 318 (383)
T TIGR03540 257 AGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIG-I-DV-------------E--K-PK 318 (383)
T ss_pred HHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-C-Ee-------------c--C-CC
Confidence 4454444333333333334444333322 23334445556666666666431 1 10 0 1 11
Q ss_pred CCceEEEEeCCHHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 219 AGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
.+.++++.+++..+..++.+.+ +.+||.+++|..|.. ..++++|||++.
T Consensus 319 ~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~---------------------~~~~~~Ris~~~ 368 (383)
T TIGR03540 319 ATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGE---------------------YGEGYIRISLTV 368 (383)
T ss_pred cceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhCc---------------------cCCCeEEEEecC
Confidence 2455677776433466777775 567999998876421 024679999985
No 66
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.96 E-value=1e-26 Score=203.89 Aligned_cols=270 Identities=21% Similarity=0.220 Sum_probs=189.3
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
.++.+++++||+|+++.++|+++...+...++..|++++.++.+ |++++++.++++++++++++++||||.+.|+
T Consensus 77 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~ 156 (376)
T TIGR01977 77 IALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPI 156 (376)
T ss_pred HHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCH
Confidence 34455789999999999999988877777778889999998863 7899999998899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH----------
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL---------- 148 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~---------- 148 (307)
++|.++|+++|+++|+|++|+.|..+ +...+++|++++|+|||+++|.| .|+++.+++...+.....
T Consensus 157 ~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 234 (376)
T TIGR01977 157 EEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQG--TGGLYIREGIKLKPLKSGGTGSHSALID 234 (376)
T ss_pred HHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEecccccccCCCC--ceEEEEcCCcCcCceecCCCcccccccc
Confidence 99999999999999999999999876 66678999999999999988888 787777765421111100
Q ss_pred ------HHhcCCCCChhhHHHHhhccccH-----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhcc
Q 021783 149 ------QNAEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 217 (307)
Q Consensus 149 ------~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (307)
.+...++.+.........+++.+ +...++..+.++.+.+.+++.+.+ .+..+. ++.
T Consensus 235 ~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~-~~~~~~------------~~~ 301 (376)
T TIGR01977 235 QPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKV-KIYGPA------------DPA 301 (376)
T ss_pred ccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCe-EEeCCC------------Ccc
Confidence 00111112222222222233322 222344455666666666655432 111110 111
Q ss_pred CCCceEEEEeCCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhc-CCCCCeEEEEeccCChHHHH
Q 021783 218 GAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQAR-GLTEDLVRISVGIEDVNDLI 295 (307)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~iRis~~~~~~~~~i 295 (307)
...++++|.+++.+ ...+.+.|... ||.++.|..++....+ .. ....+.+|+|++..+.++.+
T Consensus 302 ~~~~~v~~~~~~~~-~~~~~~~L~~~~gi~v~~g~~~~~~~~~--------------~~g~~~~~~iRis~~~~~t~~dv 366 (376)
T TIGR01977 302 NRVGVVSFTVEGID-SEEVADILDEKFDIATRTGLHCAPLAHK--------------TIGTFATGTIRLSLGYFNTEEEI 366 (376)
T ss_pred ccCCeEEEEECCCC-HHHHHHHHhccCCEEEEcccccchHHHH--------------HhCCCCCCeEEEecCCCCCHHHH
Confidence 24678888887654 77888888876 9999988764321111 11 22457899999998888888
Q ss_pred HHHHHHHhc
Q 021783 296 SDLDKALRT 304 (307)
Q Consensus 296 ~~l~~~l~~ 304 (307)
+.+.++|++
T Consensus 367 ~~~~~~l~~ 375 (376)
T TIGR01977 367 EKLLEALSE 375 (376)
T ss_pred HHHHHHHhh
Confidence 888888764
No 67
>PLN02187 rooty/superroot1
Probab=99.96 E-value=1.3e-26 Score=206.66 Aligned_cols=257 Identities=14% Similarity=0.134 Sum_probs=172.6
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.++++|||+|++++|+|+.+. ..++..|++++.++.. |++++++.++++++++++++|+||||
T Consensus 143 al~~~~~~l~~pGd~Vlv~~P~y~~y~----~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG 218 (462)
T PLN02187 143 GIEIVFESLARPNANILLPRPGFPHYD----ARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCG 218 (462)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCccHH----HHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCC
Confidence 45 345567899999999999999876 5677889999988751 78999999988899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----Ccc---CCCccEEEeccccccccCCCceeEEEEEcCh-hHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGE-RLA 142 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~~---~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~-~~~ 142 (307)
.+++ +++|+++|++||++||+|++|....+. ... .....++++||||.| +.+|+|+||+++.++ .+.
T Consensus 219 ~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f-~~pGlRiG~~v~~~p~~~~ 297 (462)
T PLN02187 219 NVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGW-VVPGWKIGWIALNDPEGVF 297 (462)
T ss_pred CccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhc-CCccceeEEEEecCchhHH
Confidence 9997 889999999999999999999742221 111 112479999999999 678999999998543 222
Q ss_pred ---HHHHHHHHhcCC--CCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHH
Q 021783 143 ---KELYFLQNAEGS--GLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 212 (307)
Q Consensus 143 ---~~~~~~~~~~~~--~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~ 212 (307)
+.+......... ..+...+.++...++ .+....+.+.++.+.+.+.|++.+.... +
T Consensus 298 ~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~--------------~ 363 (462)
T PLN02187 298 ETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVC--------------P 363 (462)
T ss_pred HHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcC--------------C
Confidence 233333333222 223444554444443 2333445555566666666664321100 0
Q ss_pred hhhccCCCceEEEEeCC-----H-HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe
Q 021783 213 YSQAKGAGSVLSFLTGS-----L-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 286 (307)
Q Consensus 213 ~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 286 (307)
.. ...+.++++.++. . +..+.+...+.+.||.+.+|..|. .++++||++
T Consensus 364 -~~-P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg-----------------------~~~~iRis~ 418 (462)
T PLN02187 364 -KK-PESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALG-----------------------LKNWMRITI 418 (462)
T ss_pred -CC-CCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccC-----------------------CCCeEEEEe
Confidence 01 1135666666531 1 222334455577899999887632 256899999
Q ss_pred cc--CChHHHHHHHHHHHh
Q 021783 287 GI--EDVNDLISDLDKALR 303 (307)
Q Consensus 287 ~~--~~~~~~i~~l~~~l~ 303 (307)
+. +.+++.+++|.++++
T Consensus 419 ~~~~e~l~~al~rL~~~l~ 437 (462)
T PLN02187 419 GVEAHMLEDALERLKGFCT 437 (462)
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 86 556677777777764
No 68
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.96 E-value=2.2e-27 Score=208.14 Aligned_cols=264 Identities=19% Similarity=0.148 Sum_probs=173.5
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHH
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 86 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~ 86 (307)
.+||+|+++..+|+++...+..+ +..|++++.++.+ |++++++.++++++++++++++|+||...|+++|.++|
T Consensus 84 ~~~~~vv~~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~ 162 (379)
T TIGR03402 84 PEKRHIITTAVEHPAVLSLCQHL-EKQGYKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIA 162 (379)
T ss_pred CCCCeEEEcccccHHHHHHHHHH-HHcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHH
Confidence 56789999999998887766554 4479999999863 78999999999999999999999999999999999999
Q ss_pred HHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH----HhcCCCCChhhH
Q 021783 87 HAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ----NAEGSGLAPFDC 161 (307)
Q Consensus 87 ~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 161 (307)
+++|+++++|++|+.|..+ +...+++|++++|+||++ ||+| .|++++++........... .....+......
T Consensus 163 ~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~-gp~G--~g~l~v~~~~~~~p~~~g~~~~~~~~~gt~~~~~~ 239 (379)
T TIGR03402 163 KERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLH-GPKG--VGALYIRKGTRFRPLLRGGHQERGRRAGTENVPGI 239 (379)
T ss_pred HHcCCEEEEECcccccccccCcccCCCCEEEEcHHHcC-CCCc--eEEEEECCCCCCCCcccCCccCCCcCCCCccHHHH
Confidence 9999999999999998876 777789999999999955 8999 9999998653211000000 001112222222
Q ss_pred HHHhhccccHHHHHHHHHHHH----HHHHHHHhc-CCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHH
Q 021783 162 WICLRGVKTMALRVEKQQDNA----QKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHV 236 (307)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~----~~l~~~l~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (307)
.....+++.....++...+.. +.+.+.++. .+.+ ++..+.....++++.|.+...+ ..++
T Consensus 240 ~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~-~~~~ 304 (379)
T TIGR03402 240 VGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDA--------------RLNGDPTKRLPNTVNISFEYIE-GEAI 304 (379)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCE--------------EEeCCCccCCCCEEEEEecCCC-HHHH
Confidence 222233333322333333333 344444432 2222 1111111112346666665544 6788
Q ss_pred HhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC----CCeEEEEeccCChHHHHHHHHHHH
Q 021783 237 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGIEDVNDLISDLDKAL 302 (307)
Q Consensus 237 ~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~iRis~~~~~~~~~i~~l~~~l 302 (307)
.+.|..+||.++.|..|+... ..++......|.. ++.||+|++..+.++.++.+.+.|
T Consensus 305 ~~~l~~~gI~v~~g~~c~~~~--------~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l 366 (379)
T TIGR03402 305 LLLLDMEGICASSGSACTSGS--------LEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVL 366 (379)
T ss_pred HHhhccCCEEEEchhhcCCCC--------CCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHH
Confidence 888989999999998743211 1123445555543 478999999854444544444444
No 69
>PLN02651 cysteine desulfurase
Probab=99.96 E-value=1.5e-27 Score=207.94 Aligned_cols=262 Identities=18% Similarity=0.163 Sum_probs=179.6
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
+.++||+|++++.+|+++...+..+ +..|++++.++.+ |+++++++++++++++++++++|+||.+.|+++|.+
T Consensus 84 ~~~~g~~vl~~~~~h~s~~~~~~~~-~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~ 162 (364)
T PLN02651 84 YKDKKKHVITTQTEHKCVLDSCRHL-QQEGFEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGE 162 (364)
T ss_pred ccCCCCEEEEcccccHHHHHHHHHH-HhcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHH
Confidence 4578999999999999887777554 4679999988863 789999999999999999999999999999999999
Q ss_pred HHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH------HhcCCCCC
Q 021783 85 MAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ------NAEGSGLA 157 (307)
Q Consensus 85 ~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~------~~~~~~~~ 157 (307)
+||++|+++++|++|+.|..+ +..++++|++++|.|||+ ||.| .|+++++++.......... .....+.+
T Consensus 163 ~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~~-gp~G--~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~ 239 (364)
T PLN02651 163 LCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIY-GPKG--VGALYVRRRPRVRLEPLMSGGGQERGRRSGTEN 239 (364)
T ss_pred HHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhhC-CCCc--eEEEEEcCCCCCCCCccccCCCccCCccCCCcc
Confidence 999999999999999999877 888899999999999985 8888 9999998754322111110 01112222
Q ss_pred hhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCC-CCchHHHhh-hc-cCCCceEEEEeCCHHHHH
Q 021783 158 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE-HPGHELHYS-QA-KGAGSVLSFLTGSLALSK 234 (307)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~-~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~ 234 (307)
.........+++.+....+++.+..+.+.+++.+. +.. .+++++..+ .+ ....+++.|.+++.+ ..
T Consensus 240 ~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~----------l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~-~~ 308 (364)
T PLN02651 240 TPLVVGLGAACELAMKEMDYDEKHMKALRERLLNG----------LRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVE-GE 308 (364)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH----------HHhhCCCEEEECCCCcccCcCCEEEEEeCCCC-HH
Confidence 22333333444433333344444444444444321 100 112222221 11 123568899887665 67
Q ss_pred HHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC----CCeEEEEeccCChHHHHH
Q 021783 235 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGIEDVNDLIS 296 (307)
Q Consensus 235 ~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~iRis~~~~~~~~~i~ 296 (307)
++.+.|.. |.++.|+.++. +.. .++....+.|.. .+.+|+|++..+++++|+
T Consensus 309 ~~~~~L~~--i~v~~g~~c~~---~~~-----~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 309 SLLMGLKE--VAVSSGSACTS---ASL-----EPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred HHHHHhCC--EEEEchhhcCC---CCC-----CcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 88888875 99999987332 211 134455566654 389999999987777653
No 70
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2.1e-26 Score=202.81 Aligned_cols=255 Identities=15% Similarity=0.134 Sum_probs=173.5
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
++ .++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.+.+++++|++++|+||||
T Consensus 118 al~~~~~~~~~~gd~Vlv~~P~y~~~~----~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG 193 (410)
T PRK06290 118 ALAMLPSCFINPGDVTLMTVPGYPVTG----THTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTG 193 (410)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCccHH----HHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCC
Confidence 44 344557899999999999998887 6677889999999873 67888888888899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCc----CC---cc-CCCccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVL----SR---PL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~----~~---~~-~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
.+++ +++|.++|++||++||+|++|+.... .. .. ..+.+++++||||.+ |.+|+|+||++++++ +.+
T Consensus 194 ~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~-g~~GlRiG~ii~~~~-l~~ 271 (410)
T PRK06290 194 AVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAY-NMTGWRLAFVVGNEL-IVK 271 (410)
T ss_pred cCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhc-CCchhheEeEEeCHH-HHH
Confidence 9997 68888889999999999999974221 11 11 225679999999999 678999999998755 444
Q ss_pred HHHHHHHhcCCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCC
Q 021783 144 ELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 220 (307)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 220 (307)
.+...........+...+..+...++. ++...+.+.++.+.+.+.|++.. + .+ . .+ ..+
T Consensus 272 ~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~-------------~--~p-~g~ 333 (410)
T PRK06290 272 AFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEVG-F-KA-------------E--MP-GGT 333 (410)
T ss_pred HHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhCC-C-ee-------------c--CC-Cee
Confidence 454444333333333334444444432 23334445566666666666431 1 00 0 11 123
Q ss_pred ceEEEEeCCH-------HHHHHHHhcCCcce-eecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec-----
Q 021783 221 SVLSFLTGSL-------ALSKHVVETTKYFS-ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----- 287 (307)
Q Consensus 221 ~~~~~~~~~~-------~~~~~~~~~l~~~g-i~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----- 287 (307)
.++|+++++. .+..++.+.|..++ +.+.+|.. ..+++||+++
T Consensus 334 f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~-------------------------~~~~lRi~~~~~~~~ 388 (410)
T PRK06290 334 FYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDD-------------------------AGHFLRFSVTFEAKD 388 (410)
T ss_pred eEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCcc-------------------------ccCeEEEEEEccccc
Confidence 4445566432 13667777776654 44434332 1257999996
Q ss_pred cCChHHHHHHHHHHHhcCC
Q 021783 288 IEDVNDLISDLDKALRTGP 306 (307)
Q Consensus 288 ~~~~~~~i~~l~~~l~~~~ 306 (307)
.++.+++++.|.+.|.++.
T Consensus 389 ~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 389 EEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred ccchhHHHHHHHHHHhhcc
Confidence 3889999999999987653
No 71
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.95 E-value=9e-27 Score=205.02 Aligned_cols=254 Identities=15% Similarity=0.105 Sum_probs=167.6
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.++++|||+|++++|+|+.+. ..+...|++++.++.+ |++++++.+.++++++++++|+||||
T Consensus 109 al~~~~~~~~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG 184 (394)
T PRK05942 109 GLTHLALAYVNPGDVVLVPSPAYPAHF----RGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTT 184 (394)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchH----HHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCC
Confidence 44 344567899999999999998887 4456789999988763 67899998888999999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCc--------CCcc-CCCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVL--------SRPL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~--------~~~~-~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
.+++ +++|.++|+++|+++|+|++|+.... .... ..+..++++||||.+ |.+|+|+||++++++ +.
T Consensus 185 ~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~-~~~GlRiG~i~~~~~-l~ 262 (394)
T PRK05942 185 ATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTY-NMAGWRVGFVVGNRH-II 262 (394)
T ss_pred CcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhcc-CChhhheeeeecCHH-HH
Confidence 9997 88999999999999999999863221 1111 124568899999999 678999999998754 55
Q ss_pred HHHHHHHHhcCCCCChhhHHHHhhccccHH----HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 143 KELYFLQNAEGSGLAPFDCWICLRGVKTMA----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+.+...........+...+..+...++... ...+.+.++.+.+.+.++... + . +. . ..
T Consensus 263 ~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~-~-------------~~--~-~~ 324 (394)
T PRK05942 263 QGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGELG-W-N-------------IP--P-TK 324 (394)
T ss_pred HHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-C-e-------------ec--C-CC
Confidence 555554443333334444444444443222 222333344444555554321 1 0 00 1 11
Q ss_pred CCceEEEEeCCHHHHHHHHh-cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHH
Q 021783 219 AGSVLSFLTGSLALSKHVVE-TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISD 297 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~-~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~ 297 (307)
.+.+++++++......++.. .+..+||.+.+|..|.. ..++++||+++ .+.+.+.+.
T Consensus 325 ~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~---------------------~~~~~iRis~~-~~~~~l~~~ 382 (394)
T PRK05942 325 ATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGE---------------------GGEGYVRISLI-ADCDRLGEA 382 (394)
T ss_pred eeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCc---------------------CCCCeEEEEec-CCHHHHHHH
Confidence 24467777753222344444 45568999988876421 12568999998 456666666
Q ss_pred HHHHH
Q 021783 298 LDKAL 302 (307)
Q Consensus 298 l~~~l 302 (307)
+.+..
T Consensus 383 l~~l~ 387 (394)
T PRK05942 383 LDRLK 387 (394)
T ss_pred HHHHH
Confidence 65543
No 72
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.95 E-value=9.1e-27 Score=204.72 Aligned_cols=253 Identities=13% Similarity=0.056 Sum_probs=163.6
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.++++|||+|++++|+|+.+. ..++..|++++.++.+ |++++++.+.++++++++++|+||||
T Consensus 104 al~~~~~~l~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG 179 (388)
T PRK07366 104 GTAHLPLAVLNPGDFALLLDPGYPSHA----GGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTT 179 (388)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchH----HHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCC
Confidence 44 344457899999999999999888 6678899999999874 45677777777899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCc------CCcc---C-CCccEEEeccccccccCCCceeEEEEEcChhH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVL------SRPL---E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~------~~~~---~-~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
.+++ +++|+++|++||++||+|++|..-.. +... . ....++++||||.+ |.+|+|+||++++++ +
T Consensus 180 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-g~~GlRiG~~v~~~~-l 257 (388)
T PRK07366 180 AIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSY-NMGGFRIGFAIGNAQ-L 257 (388)
T ss_pred ccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeeccccc-CCcchhheehcCCHH-H
Confidence 9997 67788899999999999999963221 1111 1 13568999999999 678999999998755 5
Q ss_pred HHHHHHHHHhcCCCCChhhHHHHhhccc----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhcc
Q 021783 142 AKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 217 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (307)
.+.+..................+...+. .++...+.+.++.+.+.+.|++.. + .+. . .
T Consensus 258 i~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~~-~-~~~---------------~-p 319 (388)
T PRK07366 258 IQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQIG-W-PVP---------------L-P 319 (388)
T ss_pred HHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-C-ccc---------------C-C
Confidence 4545444433322221111111222221 223333444455555555565431 1 000 1 2
Q ss_pred CCCceEEEEeCCH--HHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChH
Q 021783 218 GAGSVLSFLTGSL--ALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVN 292 (307)
Q Consensus 218 ~~~~~~~~~~~~~--~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~ 292 (307)
..+.++++++++. ....++.+.+ +..||.+.+|..|.. ..++++||+++. ++++
T Consensus 320 ~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRi~~~~~~~~l~ 378 (388)
T PRK07366 320 EATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGK---------------------SGEGYVRFALVHDPDILE 378 (388)
T ss_pred CeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCc---------------------CCCCeEEEEecCCHHHHH
Confidence 2467778887542 1245666555 667999998876421 124689999985 3344
Q ss_pred HHHHHHHH
Q 021783 293 DLISDLDK 300 (307)
Q Consensus 293 ~~i~~l~~ 300 (307)
+.+++|.+
T Consensus 379 ~~l~rl~~ 386 (388)
T PRK07366 379 EAVERIAA 386 (388)
T ss_pred HHHHHHHH
Confidence 44444443
No 73
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.3e-26 Score=203.82 Aligned_cols=256 Identities=17% Similarity=0.180 Sum_probs=172.2
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
.++.+++++||+|++++|+|+++. ..++..|++++.++.+ |++++++.++++++++++++|+||||.++
T Consensus 108 ~~~~~l~~~g~~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~ 183 (391)
T PRK08361 108 LAFESLLEEGDEVIIPDPAFVCYV----EDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATL 183 (391)
T ss_pred HHHHHhcCCCCEEEEcCCCCcccH----HHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCc
Confidence 344567899999999999998887 5567789999988762 68999999988899999999999999999
Q ss_pred c---HHHHHHHHHHcCCEEEEeCccCCCCcC-----Cc--cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH
Q 021783 78 D---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RP--LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 147 (307)
Q Consensus 78 ~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~--~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~ 147 (307)
| +++|.++|+++++++|+|++|+..... .. ...+.+++++|+||.+ |.+|+|+||++++++.+ +.+..
T Consensus 184 ~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~-~~~GlRiG~~~~~~~~~-~~~~~ 261 (391)
T PRK08361 184 DKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTF-AMTGWRLGFVIAPEQVI-KDMIK 261 (391)
T ss_pred CHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhc-CCcHhhhhhhccCHHHH-HHHHH
Confidence 8 889999999999999999999743211 11 1225789999999999 66799999999975544 44444
Q ss_pred HHHhcCCCCChhhHHHHhhccc------cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 148 LQNAEGSGLAPFDCWICLRGVK------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
.........+...+..+...++ .++...+...++.+.+.+.|++.+.+ .+. .+ ..+.
T Consensus 262 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~--------------~~~--~p-~g~~ 324 (391)
T PRK08361 262 LHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHI--------------KVF--EP-KGAF 324 (391)
T ss_pred HHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCC--------------eec--CC-CEEE
Confidence 4433323334444444433332 13333444455555566666643221 111 11 1234
Q ss_pred eEEEEeCC-HHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHH
Q 021783 222 VLSFLTGS-LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISD 297 (307)
Q Consensus 222 ~~~~~~~~-~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~ 297 (307)
++++.++. ..+..++.+.+ +.+||.+.+|..|.. ..++++||+++. +++++.++.
T Consensus 325 ~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRi~~~~~~~~l~~al~~ 383 (391)
T PRK08361 325 YVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGK---------------------AGEGYIRISYATSKEKLIEAMER 383 (391)
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCC---------------------CCCCEEEEEecCCHHHHHHHHHH
Confidence 56667653 11355666666 457999998876421 125789999986 445555666
Q ss_pred HHHHHhc
Q 021783 298 LDKALRT 304 (307)
Q Consensus 298 l~~~l~~ 304 (307)
|.+.+++
T Consensus 384 l~~~l~~ 390 (391)
T PRK08361 384 MEKALEE 390 (391)
T ss_pred HHHHHhc
Confidence 6666544
No 74
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.95 E-value=1.3e-26 Score=206.10 Aligned_cols=261 Identities=20% Similarity=0.181 Sum_probs=177.5
Q ss_pred HHH-HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcCC-CceEEEEe-CCCCCccc
Q 021783 3 ALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGP-WTKLVWVE-SPTNPRQQ 75 (307)
Q Consensus 3 al~-~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~~-~~~~v~~~-~~~n~tG~ 75 (307)
|+. ++..+++|||+|++++|+|.... ++++..|++++.||++ |+++|++.+.. ++|+++++ +.+||||.
T Consensus 167 al~l~~~~l~~pGd~v~vE~PtY~~~~----~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~ 242 (459)
T COG1167 167 ALDLLLRLLLDPGDTVLVEDPTYPGAL----QALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQNPTGV 242 (459)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCcHHHH----HHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCC
Confidence 553 34457899999999999999998 7788899999999986 89999999974 78999888 78999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCccCCCCc--------CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHH
Q 021783 76 ICD---IRKIAEMAHAHGALLLVDNSIMSPVL--------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 144 (307)
Q Consensus 76 ~~~---~~~l~~~~~~~~~~li~D~a~~~~~~--------~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~ 144 (307)
+++ .++|+++|++||++||+|+.|+.-.+ ...+..+.+++++||||.++ +|+|+||++++++ +.+.
T Consensus 243 tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~--PglRlG~vv~p~~-~~~~ 319 (459)
T COG1167 243 TMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA--PGLRLGYVVAPPE-LIEK 319 (459)
T ss_pred ccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc--cccceeeeeCCHH-HHHH
Confidence 997 77999999999999999999973221 12233478999999999994 6999999999865 5455
Q ss_pred HHHHHHhcCCCCChhhHHHHh----hc-cc-cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 145 LYFLQNAEGSGLAPFDCWICL----RG-VK-TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~----~~-l~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+...........+...+.... .+ .. +++...+.+.+..+.+.+.|+++.. ....|. .+.
T Consensus 320 ~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~-------------~~~~~~-~p~- 384 (459)
T COG1167 320 LLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLP-------------ELATWT-RPE- 384 (459)
T ss_pred HHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------CCeeee-cCC-
Confidence 555444444333333322211 21 11 1222222223333444445544321 011111 111
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCcceeecCC-CCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc---CChHHH
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYFSITVSF-GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDL 294 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~-g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~ 294 (307)
.|.++|+.++...+...+.+.+..+|+.+.+ |..|... +...+++|++++. +++++.
T Consensus 385 gG~flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~-------------------~~~~~~~Rl~~s~~~~e~i~~g 445 (459)
T COG1167 385 GGLFLWLELPEGIDARELLAAALEKGVVVTPLGSAFSAD-------------------GDPRNGLRLSFSSPSEEEIEEG 445 (459)
T ss_pred ceEEEEEEcCCCCCHHHHHHHHHHCCCEEEcCCccccCC-------------------CCCCCeEEEEcCCCCHHHHHHH
Confidence 3678888887665588899998889998887 7764421 1135679999987 455555
Q ss_pred HHHHHHHHhc
Q 021783 295 ISDLDKALRT 304 (307)
Q Consensus 295 i~~l~~~l~~ 304 (307)
++.|.+.+.+
T Consensus 446 i~~l~~~~~~ 455 (459)
T COG1167 446 IKRLAALLRE 455 (459)
T ss_pred HHHHHHHHHH
Confidence 5555555543
No 75
>PRK08960 hypothetical protein; Provisional
Probab=99.95 E-value=4.7e-26 Score=200.07 Aligned_cols=255 Identities=15% Similarity=0.075 Sum_probs=167.4
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++..+++|||+|++++|+|+.+. ..++..|++++.++.+ |++++++.++++++++++++|+||||
T Consensus 104 al~~~~~~~~~~gd~vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG 179 (387)
T PRK08960 104 ALLLASSLLVDPGKHWLLADPGYPCNR----HFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTG 179 (387)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCC
Confidence 44 344457899999999999999888 4556678888888752 67899998888899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC----Ccc-CCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 146 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~----~~~-~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~ 146 (307)
.+++ +++|+++|++||+++|+|++|..-... ... .....++++|+||.+ |.+|+|+||++++++ +.+.+.
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~~~~~~~-~~~~~~ 257 (387)
T PRK08960 180 TLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYF-GMTGWRLGWLVAPPA-AVPELE 257 (387)
T ss_pred cCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeeccccc-CCcccEEEEEEcCHH-HHHHHH
Confidence 9997 667888899999999999998632211 111 124679999999999 678999999999865 444444
Q ss_pred HHHHhcCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 147 FLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
..........+...+.++...+. .+....+.+.++.+.+.+.|+... + .++. . ...+.
T Consensus 258 ~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~-~--------------~~~~-~-p~g~~ 320 (387)
T PRK08960 258 KLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELG-F--------------GIAV-E-PQGAF 320 (387)
T ss_pred HHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcC-C--------------cCCc-C-CCeeE
Confidence 44433333334444444433332 222333444555555666665431 0 0000 1 11355
Q ss_pred eEEEEeCCH-HHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHH
Q 021783 222 VLSFLTGSL-ALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 299 (307)
Q Consensus 222 ~~~~~~~~~-~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~ 299 (307)
+++++++.. .+..++.+.+ +.+||.+.+|..|.. +..++++||+++. +.+.+.+.+.
T Consensus 321 f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--------------------~~~~~~iRi~~~~-~~~~l~~al~ 379 (387)
T PRK08960 321 YLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGR--------------------HQAGQHVRFAYTQ-SLPRLQEAVE 379 (387)
T ss_pred EEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCC--------------------CCCCCeEEEEecC-CHHHHHHHHH
Confidence 667777531 2256676664 568999999876431 0124689999996 4555555554
Q ss_pred HH
Q 021783 300 KA 301 (307)
Q Consensus 300 ~~ 301 (307)
+.
T Consensus 380 ~l 381 (387)
T PRK08960 380 RI 381 (387)
T ss_pred HH
Confidence 43
No 76
>PRK08068 transaminase; Reviewed
Probab=99.95 E-value=3.1e-26 Score=201.33 Aligned_cols=249 Identities=12% Similarity=0.074 Sum_probs=166.4
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
.++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.+..+++++++++|+||||.++
T Consensus 109 ~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~ 184 (389)
T PRK08068 109 ELPQCLMNPGDTILVPDPGYPDYL----SGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVA 184 (389)
T ss_pred HHHHHhCCCCCEEEEcCCCCcchH----HHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcC
Confidence 445567899999999999998887 6677899999999873 56788888877899999999999999999
Q ss_pred c---HHHHHHHHHHcCCEEEEeCccCCCCc------C---CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHH
Q 021783 78 D---IRKIAEMAHAHGALLLVDNSIMSPVL------S---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 145 (307)
Q Consensus 78 ~---~~~l~~~~~~~~~~li~D~a~~~~~~------~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~ 145 (307)
+ +++|+++|++||+++|+|++|..-.. . .....+..++++||||.+ |.+|+|+||++.+++ +.+.+
T Consensus 185 s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~~-l~~~l 262 (389)
T PRK08068 185 TKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTF-NMAGWRVAFAVGNES-VIEAI 262 (389)
T ss_pred CHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhcc-CCccceeEeEecCHH-HHHHH
Confidence 7 56888899999999999999953111 1 111234679999999999 678999999998754 55555
Q ss_pred HHHHHhcCCCCChhhHHHHhhcc----ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 146 YFLQNAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
.........+.++..+..+...+ +.++...+.+.++.+.+.+.++... + . +. + ...+.
T Consensus 263 ~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g-~--------~------~~--~-~~g~~ 324 (389)
T PRK08068 263 NLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIG-W--------E------VD--A-PKGSF 324 (389)
T ss_pred HHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-C--------c------cc--C-CCeeE
Confidence 44443333233322233322222 2233334445555555666665431 1 0 00 1 11234
Q ss_pred eEEEEeCCHHHHHHHHhcCCc-ceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHH
Q 021783 222 VLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 299 (307)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~l~~-~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~ 299 (307)
++++.+++......+.+.+.. +||.+.+|..|.. ..++++||+++.. .+.+.+.+.
T Consensus 325 ~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~---------------------~~~~~iRi~~~~~-~~~l~~al~ 381 (389)
T PRK08068 325 FAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGE---------------------HGEGYVRVGLLTD-EERLREAVE 381 (389)
T ss_pred EEEEECCCCCCHHHHHHHHHHhCCEEEecchHhCc---------------------cCCCeEEEEEcCC-HHHHHHHHH
Confidence 567787643346778888764 6999988876421 1256899999863 344444443
No 77
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.95 E-value=2.7e-26 Score=202.19 Aligned_cols=256 Identities=16% Similarity=0.165 Sum_probs=169.5
Q ss_pred HHHHHhcCC---CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 5 AAVTHLLGT---GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 5 ~~~~~~~~~---gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
.++.++++| ||+|++++|.|+.+. ..++..|++++.+|.+ |++++++.+.++++++++++|+||||
T Consensus 105 ~~~~~l~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG 180 (396)
T PRK09147 105 AFAQTVIDRDGPGPLVVCPNPFYQIYE----GAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTG 180 (396)
T ss_pred HHHHHHcCCCCCCCEEEEcCCCccchH----HHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcC
Confidence 345567899 999999999998877 6677889999999863 57888887777899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcCC---------------ccCCCccEEEeccccccccCCCceeEEEEE
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR---------------PLELGADIVMHSATKFIAGHSDVMAGVLAV 136 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~---------------~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~ 136 (307)
.+++ +++|+++|++|+++||+|++|....+.. ....+..++++||||.+ +.+|+|+||+++
T Consensus 181 ~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~~GlRiG~~~~ 259 (396)
T PRK09147 181 AVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRS-NVPGLRSGFVAG 259 (396)
T ss_pred ccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEecccccc-CCccceeeeecC
Confidence 9995 8888899999999999999997432110 01235679999999988 668999999998
Q ss_pred cChhHHHHHHHHHHhcCCCCChhhHHHHhhccc---cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 137 KGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
+++ +.+.+...........+...+..+...+. .+....+.+.+..+.+.+.|+.. + .+
T Consensus 260 ~~~-l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--~-~~--------------- 320 (396)
T PRK09147 260 DAA-LLKKFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV--L-DV--------------- 320 (396)
T ss_pred CHH-HHHHHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh--c-CC---------------
Confidence 754 44445444433333344444444333332 23333444455555555555432 0 00
Q ss_pred hhccCCCceEEEEeCCHHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CC
Q 021783 214 SQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--ED 290 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~ 290 (307)
.. ...+.++|++++ .. ..++.+.+ +..||.+.+|..|...... .....+++||+++. ++
T Consensus 321 ~~-p~~g~f~~~~~~-~~-~~~~~~~ll~~~gv~v~pg~~f~~~~~~---------------~~~~~~~iRi~~~~~~~~ 382 (396)
T PRK09147 321 QL-PDAGFYLWAKVP-GD-DTEFARRLYADYNVTVLPGSYLAREAHG---------------VNPGAGRVRIALVAPLAE 382 (396)
T ss_pred CC-CCeeEEEEEECC-CC-HHHHHHHHHHhCCEEEeCCccccccccC---------------CCCCCCeEEEEecCCHHH
Confidence 01 124677788876 22 45565655 4679999988765321000 01135789999986 44
Q ss_pred hHHHHHHHHHHH
Q 021783 291 VNDLISDLDKAL 302 (307)
Q Consensus 291 ~~~~i~~l~~~l 302 (307)
+++.+++|.+++
T Consensus 383 l~~~l~rl~~~~ 394 (396)
T PRK09147 383 CVEAAERIVDFC 394 (396)
T ss_pred HHHHHHHHHHHh
Confidence 555566665554
No 78
>PRK08912 hypothetical protein; Provisional
Probab=99.95 E-value=2.4e-26 Score=201.97 Aligned_cols=258 Identities=18% Similarity=0.137 Sum_probs=171.5
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~ 75 (307)
|+ .++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.+.++++++++++|+||||.
T Consensus 99 al~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~ 174 (387)
T PRK08912 99 ALAAALLALVEPGDEVVLFQPLYDAYL----PLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAGK 174 (387)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCchhhH----HHHHHcCCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCCcCc
Confidence 44 345567899999999999998877 6678889999888763 679999998888999999999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCccCCCCc------C--Ccc-CCCccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 76 ICD---IRKIAEMAHAHGALLLVDNSIMSPVL------S--RPL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 76 ~~~---~~~l~~~~~~~~~~li~D~a~~~~~~------~--~~~-~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
+++ +++|.++|++||+++|+|++|+.... + ... ..+.+++++|+||.+ |.+|+|+||++++++ +.+
T Consensus 175 ~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~~-~~~ 252 (387)
T PRK08912 175 VFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIF-SLTGWKVGFVCAAPP-LLR 252 (387)
T ss_pred ccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhc-cCcCceeEEEecCHH-HHH
Confidence 997 77799999999999999999853211 1 111 135789999999999 778999999999755 444
Q ss_pred HHHHHHHhcCCCCChhhHHHHhhccc----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 144 ELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
.+...........++..+..+...+. .++...+.+.++.+.+.+.|+... + . +. + ...
T Consensus 253 ~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~--------~------~~--~-~~g 314 (387)
T PRK08912 253 VLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIG-F--------P------VL--P-SQG 314 (387)
T ss_pred HHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-C--------c------cc--C-CCc
Confidence 44444433322233323333333321 222333444555555666665431 1 0 00 1 112
Q ss_pred CceEEEEeCC---HHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHH
Q 021783 220 GSVLSFLTGS---LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVND 293 (307)
Q Consensus 220 ~~~~~~~~~~---~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~ 293 (307)
+.++++.++. ..+..++.+.+ +..||.+.+|..|... ....+++||+++. +.+++
T Consensus 315 ~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~-------------------~~~~~~iRl~~~~~~~~l~~ 375 (387)
T PRK08912 315 TYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEE-------------------DPVTSVVRFCFAKRDATLDE 375 (387)
T ss_pred ceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCC-------------------CCCCCEEEEEEeCCHHHHHH
Confidence 4566667653 12356677765 5679999988764311 1125789999996 45555
Q ss_pred HHHHHHHHHh
Q 021783 294 LISDLDKALR 303 (307)
Q Consensus 294 ~i~~l~~~l~ 303 (307)
.+++|.++++
T Consensus 376 ~l~rl~~~l~ 385 (387)
T PRK08912 376 AVERLAAARR 385 (387)
T ss_pred HHHHHHHHHh
Confidence 5666666554
No 79
>PRK07682 hypothetical protein; Validated
Probab=99.95 E-value=1.3e-26 Score=203.06 Aligned_cols=258 Identities=16% Similarity=0.158 Sum_probs=175.7
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.++++|||+|++++|+|+.+. ..++..|.+++.++.+ |++++++.+.++++++++++|+||||
T Consensus 93 al~~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG 168 (378)
T PRK07682 93 ALDVAMRAIINPGDEVLIVEPSFVSYA----PLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTG 168 (378)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCchhhH----HHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcC
Confidence 45 344567899999999999998776 5566778888888752 68999999988899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-------C-ccCCCccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-------R-PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-------~-~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
.+++ +++|+++|++|++++|+|++|+..... . ....+.+++++||||.+ +.+|+|+||++++++ +.+
T Consensus 169 ~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~GlR~G~~~~~~~-~i~ 246 (378)
T PRK07682 169 AVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGF-AMTGWRLGFIAAPVY-FSE 246 (378)
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccc-cChhhhhhhhhcCHH-HHH
Confidence 9985 889999999999999999999743221 1 11125789999999999 667999999999755 555
Q ss_pred HHHHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 144 ELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
.+...........+...+..+...++. +....+.+.++.+.+.+.|++.. + .-. .+ ..
T Consensus 247 ~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~--------~~~--------~p-~g 308 (378)
T PRK07682 247 AMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIG-L--------TCH--------VP-GG 308 (378)
T ss_pred HHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCC-C--------ccC--------CC-Ce
Confidence 554444333333344444444444432 23334445556666666666431 1 000 11 12
Q ss_pred CceEEEEeCC-HHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHH
Q 021783 220 GSVLSFLTGS-LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLI 295 (307)
Q Consensus 220 ~~~~~~~~~~-~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i 295 (307)
+.+++..+.. .....++.+.+ +.+||.+.+|..|.. ..++++|||++. +++++.+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~---------------------~~~~~iRis~~~~~~~l~~~l 367 (378)
T PRK07682 309 AFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGE---------------------SGEGFIRCSYATSLEQLQEAM 367 (378)
T ss_pred eEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCc---------------------CCCCeEEEEeCCCHHHHHHHH
Confidence 3344444531 12356777775 467999998876421 125789999986 5777778
Q ss_pred HHHHHHHhcC
Q 021783 296 SDLDKALRTG 305 (307)
Q Consensus 296 ~~l~~~l~~~ 305 (307)
++|.+++++.
T Consensus 368 ~~l~~~l~~~ 377 (378)
T PRK07682 368 KRMKRFVENK 377 (378)
T ss_pred HHHHHHHhhc
Confidence 8888777654
No 80
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.95 E-value=4.6e-26 Score=201.11 Aligned_cols=255 Identities=14% Similarity=0.063 Sum_probs=168.2
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
.++.++++|||+|++++|+|+.+. ..++..|++++.++.+ |++++++.+.++++++++++|+||||.++
T Consensus 112 ~~~~~l~~~gd~v~v~~P~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~ 187 (409)
T PLN00143 112 IIIKVLARPEANILLPRPGFPDVE----TYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVY 187 (409)
T ss_pred HHHHHHcCCCCEEEEcCCCCcCHH----HHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCcc
Confidence 344567899999999999998887 5677889999988752 78999998888899999999999999999
Q ss_pred c---HHHHHHHHHHcCCEEEEeCccCCCCc------C--CccCCCccEEEeccccccccCCCceeEEEEEc-ChhHHH--
Q 021783 78 D---IRKIAEMAHAHGALLLVDNSIMSPVL------S--RPLELGADIVMHSATKFIAGHSDVMAGVLAVK-GERLAK-- 143 (307)
Q Consensus 78 ~---~~~l~~~~~~~~~~li~D~a~~~~~~------~--~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~-~~~~~~-- 143 (307)
+ +++|+++|++||+++|+|++|..-.. + .....+..++++||||.| +.+|+|+||++++ ++.+.+
T Consensus 188 s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f-~~pGlRvG~~v~~~p~~~~~~~ 266 (409)
T PLN00143 188 SYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRW-MIPGWGLGWLVTCDPSGLLQIC 266 (409)
T ss_pred CHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhc-CCCccceEEEEeeCchhhhhhH
Confidence 7 78889999999999999999973221 1 112234679999999999 6689999999994 332321
Q ss_pred ----HHHHHHHhcCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhh
Q 021783 144 ----ELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 144 ----~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 214 (307)
.+........ ..+...+..+...++ .+....+.+.++.+.+.+.|++.+. ...+ .
T Consensus 267 ~~~~~~~~~~~~~~-~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~--------------~~~~-~ 330 (409)
T PLN00143 267 EIADSIKKALNPAP-FPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPC--------------IMCP-Q 330 (409)
T ss_pred HHHHHHHHHHhccC-CCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCC--------------CCCC-C
Confidence 1222221111 123334444443332 2333344444555555555543211 0000 0
Q ss_pred hccCCCceEEEEeCC-----HHHHHHHH-hcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 215 QAKGAGSVLSFLTGS-----LALSKHVV-ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 215 ~~~~~~~~~~~~~~~-----~~~~~~~~-~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
. ...+.++|++++. .+....+. +.+...||.+.+|..|. .++++||+++.
T Consensus 331 ~-p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-----------------------~~~~iRi~~~~ 386 (409)
T PLN00143 331 K-AEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVG-----------------------LKNWLRITFAV 386 (409)
T ss_pred C-CCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccC-----------------------CCCeEEEEEcC
Confidence 1 1236677777752 11233444 44577899999887632 25679999985
Q ss_pred --CChHHHHHHHHHHHhc
Q 021783 289 --EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 --~~~~~~i~~l~~~l~~ 304 (307)
+++++.+++|.+.+++
T Consensus 387 ~~~~l~~al~rl~~~l~~ 404 (409)
T PLN00143 387 EQSSLEDGLGRLKSFCGR 404 (409)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 5666777777777653
No 81
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=6.9e-26 Score=202.36 Aligned_cols=257 Identities=14% Similarity=0.131 Sum_probs=172.4
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcc-cCCcEEEEecCC-------ChHHHHhhcC------CCceEEEEe
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTC-------DLDEVASAIG------PWTKLVWVE 67 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~-------d~~~l~~~l~------~~~~~v~~~ 67 (307)
++ .++.++++|||.|++++|.|+.+. ..+. ..|++++.++.+ |++++++++. .++++++++
T Consensus 123 al~~l~~~l~~pGd~Vlv~~P~Y~~~~----~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~ 198 (468)
T PLN02450 123 ANETLMFCLAEPGDAFLLPTPYYPGFD----RDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLIT 198 (468)
T ss_pred HHHHHHHHhCCCCCEEEECCCCCCchH----HHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEe
Confidence 44 345567899999999999998886 3344 579999998863 5678887764 378999999
Q ss_pred CCCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----Cc------------cCCCccEEEeccccccccCC
Q 021783 68 SPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RP------------LELGADIVMHSATKFIAGHS 127 (307)
Q Consensus 68 ~~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~------------~~~~~d~~~~s~~K~~~g~~ 127 (307)
+|+||||.+++ +++|+++|++||+++|+|++|+...+. .. ...+..++++||||.+ +.+
T Consensus 199 nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~-~l~ 277 (468)
T PLN02450 199 NPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDL-GLP 277 (468)
T ss_pred cCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccC-CCC
Confidence 99999999997 778899999999999999999732111 10 1235689999999999 678
Q ss_pred CceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhcccc-------HHHHHHHHHHHHHHHHHHHhcCCCccEEec
Q 021783 128 DVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLASHPRVKKVNY 200 (307)
Q Consensus 128 g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 200 (307)
|+|+||++++++.+.+......... ..+...+.++...++. +....+.+.+..+.+.+.|++. ++
T Consensus 278 GlRiG~li~~~~~l~~~~~~~~~~~--~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi----- 349 (468)
T PLN02450 278 GFRVGAIYSNDEMVVSAATKMSSFG--LVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GI----- 349 (468)
T ss_pred CccEEEEEECCHHHHHHHHHHhhcC--CCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CC-----
Confidence 9999999998766555544443222 2344445554444432 2333444555555566666543 11
Q ss_pred CCCCCCCchHHHhhhccCCCceEEEEeCCH------HHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHH
Q 021783 201 AGLPEHPGHELHYSQAKGAGSVLSFLTGSL------ALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 273 (307)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~ 273 (307)
. .. . ...+.++|+.++.. +...++.+.+ ...||.+.+|..|..
T Consensus 350 ---~------~~--~-~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~------------------ 399 (468)
T PLN02450 350 ---K------CL--K-SNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHC------------------ 399 (468)
T ss_pred ---c------cc--C-CCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCC------------------
Confidence 0 00 1 11344777776421 1223444444 457999999886431
Q ss_pred hcCCCCCeEEEEecc---CChHHHHHHHHHHHhcC
Q 021783 274 ARGLTEDLVRISVGI---EDVNDLISDLDKALRTG 305 (307)
Q Consensus 274 ~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~~ 305 (307)
..++++||+++. +++++.+++|.+++++.
T Consensus 400 ---~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~ 431 (468)
T PLN02450 400 ---TEPGWFRVCFANMSEETLDLAMKRLKSFVESD 431 (468)
T ss_pred ---CCCCEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 135789999984 56777788888877654
No 82
>PRK12414 putative aminotransferase; Provisional
Probab=99.95 E-value=4e-26 Score=200.18 Aligned_cols=243 Identities=16% Similarity=0.148 Sum_probs=162.2
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~ 75 (307)
|+ .++.++++|||+|++++|+|..+. ..++..|++++.++.+ |++++++.++++++++++++|+||||.
T Consensus 102 al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~ 177 (384)
T PRK12414 102 GLYAAISALVHPGDEVIYFEPSFDSYA----PIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSAT 177 (384)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCccchH----HHHHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCCCc
Confidence 44 445567899999999999998876 5566679999888863 679999999888999999999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----Cc----cCCCccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 76 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 76 ~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~----~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
+++ +++|+++|++||+++|+|++|....+. .. ...+..++++||||.+ |.+|+|+||++++++ +.+
T Consensus 178 ~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~-~~pGlRiG~~v~~~~-l~~ 255 (384)
T PRK12414 178 VFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSY-HVTGWRVGYCLAPAE-LMD 255 (384)
T ss_pred CCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccc-cCccceEEEEecCHH-HHH
Confidence 974 888899999999999999999732211 11 1124679999999999 678999999999855 444
Q ss_pred HHHHHHHhcCCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCC
Q 021783 144 ELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 220 (307)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 220 (307)
.+...........+...+.++...++. .....+.+.++.+.+.+.|+... + .+ . ++ ..+
T Consensus 256 ~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~-~~-~--------------~~-~gg 317 (384)
T PRK12414 256 EIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGSR-F-EL-L--------------PS-EGS 317 (384)
T ss_pred HHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhCC-C-ee-c--------------CC-Ccc
Confidence 455544433333344444444444422 22223344555555666665431 1 00 0 11 123
Q ss_pred ceEEEEeCC---HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 221 SVLSFLTGS---LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 221 ~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
.+++++++. ....+.+.+.+...||.+.+|..|.. .+..++++||+++.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~-------------------~~~~~~~iRis~~~ 369 (384)
T PRK12414 318 FFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYT-------------------DGTDTGLIRLSFSK 369 (384)
T ss_pred eEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcC-------------------CCCCCCEEEEEecC
Confidence 444446642 22234444566778999998876421 12235789999996
No 83
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=1.3e-26 Score=204.50 Aligned_cols=260 Identities=23% Similarity=0.211 Sum_probs=174.7
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 83 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~ 83 (307)
.++|||+|++++++|++....+...++..|++++.++.+ |++++++.++++++++++++++||||...|+++|.
T Consensus 100 ~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~ 179 (397)
T TIGR01976 100 RWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAIT 179 (397)
T ss_pred cCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHH
Confidence 368999999999999988877777778899999998763 68999999998999999999999999999999999
Q ss_pred HHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH---------HhcC
Q 021783 84 EMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---------NAEG 153 (307)
Q Consensus 84 ~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~---------~~~~ 153 (307)
++|+++|+++++|++|+.+..+ +..++++|++++|+||++ |++ +|+++++++.+........ +...
T Consensus 180 ~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~-g~~---~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 255 (397)
T TIGR01976 180 ELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFF-GPH---MGILWGRPELLMNLPPYKLTFSYDTGPERFEL 255 (397)
T ss_pred HHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechhhc-CCc---eEEEEEcHHHHhhCCCccccCccCCCcchhcC
Confidence 9999999999999999877655 666678999999999998 553 8999998664432211100 0111
Q ss_pred CCCChhhHHHHhhccccHHH---------------HHHHHHH----HHHHHHHHHhcCCCccEEecCCCCCCCchHHHhh
Q 021783 154 SGLAPFDCWICLRGVKTMAL---------------RVEKQQD----NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 154 ~~~~~~~~~~~~~~l~~~~~---------------~~~~~~~----~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 214 (307)
++.+.........+++.+.. .+++..+ ..+.+.+.++..+. +++..+
T Consensus 256 gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~--------------~~~~~~ 321 (397)
T TIGR01976 256 GTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPG--------------VTLYGV 321 (397)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCC--------------EEEeCC
Confidence 11221111122222222111 0222233 33333333433221 222111
Q ss_pred -hccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC--CCeEEEEeccCCh
Q 021783 215 -QAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT--EDLVRISVGIEDV 291 (307)
Q Consensus 215 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~iRis~~~~~~ 291 (307)
.+...++++.+.+++.. ...+.+.|..+||.++.|..+.. ......+.+ .+++|||++..+.
T Consensus 322 ~~~~~~~~~~~~~~~~~~-~~~l~~~L~~~gI~v~~~~~~~~--------------~~~~~~~~~~~~~~iRis~~~~~t 386 (397)
T TIGR01976 322 ARLAARVPTVSFTVHGLP-PQRVVRRLADQGIDAWAGHFYAV--------------RLLRRLGLNDEGGVVRVGLAHYNT 386 (397)
T ss_pred CCccCCCceEEEEeCCcC-HHHHHHHHHHCCeEEEeCccchH--------------HHHHHhCCCCCCCeEEEEeeccCC
Confidence 11224668888876543 66788888889999988765321 011222332 4689999998888
Q ss_pred HHHHHHHHHHH
Q 021783 292 NDLISDLDKAL 302 (307)
Q Consensus 292 ~~~i~~l~~~l 302 (307)
++.++.|.++|
T Consensus 387 ~~di~~l~~~l 397 (397)
T TIGR01976 387 AEEVDRLLEAL 397 (397)
T ss_pred HHHHHHHHHhC
Confidence 88888887754
No 84
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.95 E-value=5.8e-26 Score=201.21 Aligned_cols=257 Identities=17% Similarity=0.132 Sum_probs=166.7
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-------CChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.++.+|||+|++++|+|+.+. ..+...|++++.++. .|++++++.++++++++++++|+||||
T Consensus 129 al~l~~~~l~~~Gd~Vlv~~P~y~~y~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG 204 (430)
T PLN00145 129 AIEIIMSVLAQPGANILLPRPGYPLYE----ARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCG 204 (430)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCccHH----HHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCC
Confidence 45 344457799999999999998877 556778899988875 278999999988999999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----C---ccCCCccEEEeccccccccCCCceeEEEEEcC-hhHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----R---PLELGADIVMHSATKFIAGHSDVMAGVLAVKG-ERLA 142 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~---~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~-~~~~ 142 (307)
.+++ +++|+++|+++|+++|+|++|....+. . .......++++|+||.+ +.+|.|+||+++.+ +.+.
T Consensus 205 ~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~pG~RlG~iv~~~~~~~~ 283 (430)
T PLN00145 205 SVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRW-VVPGWRLGWIATCDPNGIL 283 (430)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEecccccc-CCCCeeEEEEEEecchhhh
Confidence 9997 788899999999999999999732211 1 12234689999999999 67899999999842 2222
Q ss_pred HH---HHHHHHh--cCCCCChhhHHHHhhcccc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHH
Q 021783 143 KE---LYFLQNA--EGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 212 (307)
Q Consensus 143 ~~---~~~~~~~--~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~ 212 (307)
.. ....... .....+...+.++...++. ++...+.+.++.+.+.+.|++.+.+ ..+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~--------------~~~ 349 (430)
T PLN00145 284 KETKVVDSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCI--------------TCP 349 (430)
T ss_pred hhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--------------CCC
Confidence 21 1122111 1222333444444444432 3333444555555555555543211 111
Q ss_pred hhhccCCCceEEEEeCC-----HHHHHHHH-hcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe
Q 021783 213 YSQAKGAGSVLSFLTGS-----LALSKHVV-ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 286 (307)
Q Consensus 213 ~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 286 (307)
. . ...+.+++++++. ..+..++. ..++++||.+.+|..|. .++++|||+
T Consensus 350 ~-~-P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg-----------------------~~~~lRis~ 404 (430)
T PLN00145 350 H-K-PEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALG-----------------------MKNWLRITF 404 (430)
T ss_pred c-C-CCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccC-----------------------CCCeEEEEe
Confidence 0 1 1235666666642 11234444 44566789888887632 257899999
Q ss_pred cc--CChHHHHHHHHHHHh
Q 021783 287 GI--EDVNDLISDLDKALR 303 (307)
Q Consensus 287 ~~--~~~~~~i~~l~~~l~ 303 (307)
+. +.+++.+++|.++++
T Consensus 405 ~~~~~~l~~al~rl~~~~~ 423 (430)
T PLN00145 405 AIDPPSLEDGLERLKSFCL 423 (430)
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 86 345555555565554
No 85
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.95 E-value=7.3e-26 Score=199.50 Aligned_cols=256 Identities=20% Similarity=0.218 Sum_probs=176.0
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|..+. ..++..|++++.++.+ |++++++.++++++++++++|+||||
T Consensus 103 a~~~~~~~~~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG 178 (393)
T PRK05764 103 ALYNAFMALLDPGDEVIIPAPYWVSYP----EMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTG 178 (393)
T ss_pred HHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCC
Confidence 44 344557899999999999998877 5667889999999874 57899999988899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC--------C--ccCCCccEEEeccccccccCCCceeEEEEEcChhH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS--------R--PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~--------~--~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
.+++ +++|.++|++||+++++|++|+..... . ....+.+++++|+||.+ +.+|+|+||++.+++ +
T Consensus 179 ~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~-~~~G~RiG~i~~~~~-~ 256 (393)
T PRK05764 179 AVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAY-AMTGWRLGYAAGPKE-L 256 (393)
T ss_pred cccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccc-cCccceeEEEecCHH-H
Confidence 9975 889999999999999999999743211 1 22346789999999999 667999999998744 5
Q ss_pred HHHHHHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhcc
Q 021783 142 AKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 217 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (307)
.+.+...........+...++.+...++. ++...+...++...+.+.|++.++ +.+. .+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g--------------~~~~--~~- 319 (393)
T PRK05764 257 IKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPG--------------LECP--KP- 319 (393)
T ss_pred HHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCC--------------Cccc--CC-
Confidence 55555555444444555555555555431 222233344445555555654322 1111 11
Q ss_pred CCCceEEEEeCCHH-----HHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--C
Q 021783 218 GAGSVLSFLTGSLA-----LSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--E 289 (307)
Q Consensus 218 ~~~~~~~~~~~~~~-----~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~ 289 (307)
..+.++++.+.... ...++.+.+ ++.||.+.+|..|. .++++|||++. +
T Consensus 320 ~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~-----------------------~~~~vRis~~~~~~ 376 (393)
T PRK05764 320 EGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFG-----------------------APGYVRLSYATSLE 376 (393)
T ss_pred CcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccC-----------------------CCCEEEEEecCCHH
Confidence 12345566664321 135666555 56799998887632 14679999975 6
Q ss_pred ChHHHHHHHHHHHhc
Q 021783 290 DVNDLISDLDKALRT 304 (307)
Q Consensus 290 ~~~~~i~~l~~~l~~ 304 (307)
++++.++.|.++++.
T Consensus 377 ~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 377 DLEEGLERIERFLES 391 (393)
T ss_pred HHHHHHHHHHHHHHh
Confidence 777778888877754
No 86
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.95 E-value=5.3e-26 Score=199.73 Aligned_cols=247 Identities=15% Similarity=0.097 Sum_probs=163.9
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcccccc
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 78 (307)
++..+++|||+|++++|+|+.+. ..++..|++++.++.+ |++++++.+.+++++|++++|+||||.+++
T Consensus 109 ~~~~~~~~gd~Vl~~~P~y~~~~----~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~ 184 (385)
T PRK09276 109 IPLAFVNPGDVVLVPDPGYPVYK----IGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVAD 184 (385)
T ss_pred HHHHhCCCCCEEEEcCCCCcChH----HHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCC
Confidence 34457899999999999998887 5567789999988763 578888888888999999999999999997
Q ss_pred ---HHHHHHHHHHcCCEEEEeCccCCCCc-----CC---cc-CCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH
Q 021783 79 ---IRKIAEMAHAHGALLLVDNSIMSPVL-----SR---PL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 146 (307)
Q Consensus 79 ---~~~l~~~~~~~~~~li~D~a~~~~~~-----~~---~~-~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~ 146 (307)
+++|+++|++||+++|+|++|..... .. .. ..+.+++++||||.+ |.+|+|+||++++++ +.+.+.
T Consensus 185 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~i~~~~-l~~~~~ 262 (385)
T PRK09276 185 LEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTY-NMTGWRIGFAVGNAD-LIAGLG 262 (385)
T ss_pred HHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhc-CCcchhheeeeCCHH-HHHHHH
Confidence 68899999999999999999973221 11 11 124679999999999 678999999998755 545555
Q ss_pred HHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCce
Q 021783 147 FLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 222 (307)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 222 (307)
..........+...+..+...+.. ++...+.+.++.+.+.+.|++. ++ .+. .+ ..+.+
T Consensus 263 ~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~--------------~~~--~~-~~~~~ 324 (385)
T PRK09276 263 KVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GL--------------EVE--PP-KATFY 324 (385)
T ss_pred HHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CC--------------ccc--CC-CcceE
Confidence 444333333333344444444432 2222333344455555555542 11 011 11 12445
Q ss_pred EEEEeCCHHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHH
Q 021783 223 LSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDL 298 (307)
Q Consensus 223 ~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l 298 (307)
+++.+++..+..++.+.+ +.+||.+.+|..|.. ..++++|||++. +-+++.+.+
T Consensus 325 ~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~---------------------~~~~~~Ris~~~-~~~~l~~~l 379 (385)
T PRK09276 325 VWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGE---------------------YGEGYFRIALTV-PDERIEEAV 379 (385)
T ss_pred EEEECCCCCCHHHHHHHHHHhCCEEECCchhhCC---------------------CCCCeEEEEeCC-CHHHHHHHH
Confidence 677775433366677765 457999998876321 124689999985 334444433
No 87
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.95 E-value=5.6e-26 Score=196.97 Aligned_cols=238 Identities=19% Similarity=0.147 Sum_probs=163.8
Q ss_pred HHHHHhcCCC---CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 5 AAVTHLLGTG---EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 5 ~~~~~~~~~g---d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
.++.+++++| |+|++++|+|+.+. ..++..|++++.++.+ |++++++++.++++++++++|+||||
T Consensus 75 ~~~~~~~~~g~~~d~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG 150 (350)
T TIGR03537 75 HFPLVFIDPEEDRRRVIFGTPGYPVYE----RGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTG 150 (350)
T ss_pred HHHHHHcCCCCCCceEEEcCCCCcchH----HHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcC
Confidence 3445577877 69999999999888 6678899999999873 68899998888899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC----Ccc--CCCccEEEeccccccccCCCceeEEEEEcChhHHHHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 145 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~----~~~--~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~ 145 (307)
.+++ +++|+++|++||+++|+|++|+..... ... ..+..++++|+||.+ |.+|+|+||++.+++ +.+.+
T Consensus 151 ~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~-g~~GlRiG~~~~~~~-~~~~~ 228 (350)
T TIGR03537 151 ATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRS-GMTGYRSGFVAGDEK-LISFL 228 (350)
T ss_pred cccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeeccccc-CCccccceeeecCHH-HHHHH
Confidence 9998 889999999999999999999743211 111 234679999999999 668999999987644 54555
Q ss_pred HHHHHhcCCCCChhhHHHHhhccc---cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCce
Q 021783 146 YFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 222 (307)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 222 (307)
.......+...+...+..+...+. ......+.+.++...+.+.++... + . +. . ...+.+
T Consensus 229 ~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g-~--------~------~~--~-~~g~~~ 290 (350)
T TIGR03537 229 RKLRANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKVG-L--------E------YL--Y-PDATFY 290 (350)
T ss_pred HHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCC-C--------c------cc--C-CCeEEE
Confidence 544433333333233333323322 233334445555555666665431 1 0 00 1 112445
Q ss_pred EEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec
Q 021783 223 LSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG 287 (307)
Q Consensus 223 ~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~ 287 (307)
+++.+++.....++.+.|..+||.+..|..|... .++++||+++
T Consensus 291 ~~~~~~~~~~~~~l~~~L~~~gv~v~~g~~f~~~---------------------~~~~~Ri~~~ 334 (350)
T TIGR03537 291 LWVKVPSGIDAKDYALRLLENGIVVAPGENFGSG---------------------EEGYVRVALV 334 (350)
T ss_pred EEEECCCCCCHHHHHHHHHHCCEEEcCchhhCCC---------------------CCCEEEEEec
Confidence 6777765434678888888889999988764310 2467999997
No 88
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.1e-25 Score=197.44 Aligned_cols=252 Identities=15% Similarity=0.142 Sum_probs=167.4
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-------CChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|+.+. ..++..|++++.++. .|++++++.++++++++++++|+||||
T Consensus 101 al~~~~~~~~~~gd~vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG 176 (384)
T PRK06348 101 GMYLALQSILDPGDEVIIHEPYFTPYK----DQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTG 176 (384)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCcchH----HHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCC
Confidence 44 344567899999999999999888 566777889888874 267999998888899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----C--CccC-CCccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----S--RPLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~--~~~~-~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
.+++ +++|.++|+++|+++|+|++|..... + .... .+..++++||||.+ +.+|+|+||++++++ +.+
T Consensus 177 ~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~l~GlRiG~~v~~~~-~~~ 254 (384)
T PRK06348 177 AVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDF-AMTGWRIGYVIAPDY-IIE 254 (384)
T ss_pred cCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhcc-CCccccceeeecCHH-HHH
Confidence 9996 78899999999999999999974321 1 1111 35789999999999 667999999999754 555
Q ss_pred HHHHHHHhcCCCCChhhHHHHhhccccH----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 144 ELYFLQNAEGSGLAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
.+...........+...+..+...+... +...+.+.++.+.+.+.|+..+.+ .+. .+ ..
T Consensus 255 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~--------------~~~--~p-~g 317 (384)
T PRK06348 255 TAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNL--------------SLH--PP-KG 317 (384)
T ss_pred HHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCc--------------eec--cC-Ce
Confidence 5555554333334444444444444322 222333344445555555533211 111 11 12
Q ss_pred CceEEEEeCC-HHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHH
Q 021783 220 GSVLSFLTGS-LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISD 297 (307)
Q Consensus 220 ~~~~~~~~~~-~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~ 297 (307)
+.++|+.++. ..+..++.+.+ +..||.+.+|..|.. ..++++||+++. +.+.+.+.
T Consensus 318 g~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRi~~~~-~~~~l~~a 375 (384)
T PRK06348 318 SIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGE---------------------SGEGYIRLACTV-GIEVLEEA 375 (384)
T ss_pred eEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhcc---------------------CCCCeEEEEecC-CHHHHHHH
Confidence 4455677752 22356677665 457999998876431 025689999985 44444444
Q ss_pred HH
Q 021783 298 LD 299 (307)
Q Consensus 298 l~ 299 (307)
+.
T Consensus 376 l~ 377 (384)
T PRK06348 376 FN 377 (384)
T ss_pred HH
Confidence 43
No 89
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.95 E-value=9e-26 Score=197.67 Aligned_cols=263 Identities=24% Similarity=0.246 Sum_probs=181.6
Q ss_pred HHHHHhcC---CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCcccc
Q 021783 5 AAVTHLLG---TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQI 76 (307)
Q Consensus 5 ~~~~~~~~---~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 76 (307)
.++.++.. +||+|++++++|++....+...++..|++++.++.+ |++++++.+.+++++|++++++||||..
T Consensus 76 ~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~ 155 (373)
T cd06453 76 LVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTI 155 (373)
T ss_pred HHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCc
Confidence 34445555 899999999999987766667777889999999874 8899999999899999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh----
Q 021783 77 CDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA---- 151 (307)
Q Consensus 77 ~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~---- 151 (307)
.|+++|.++|+++|+++++|++|+.+..+ +....++|++++|++|++++ .| +|+++++++.+.. +......
T Consensus 156 ~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~-~g--~g~~~~~~~~~~~-~~~~~~g~~~~ 231 (373)
T cd06453 156 NPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGP-TG--IGVLYGKEELLEE-MPPYGGGGEMI 231 (373)
T ss_pred CCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCC-CC--cEEEEEchHHhhc-CCCeecCCCcc
Confidence 99999999999999999999999988765 55567899999999999965 56 8999998664432 2211100
Q ss_pred -----------------cCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCch
Q 021783 152 -----------------EGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH 209 (307)
Q Consensus 152 -----------------~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~ 209 (307)
...+++.........+++ .++...++..+..+.+.+.+++.+.+. +
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~-~----------- 299 (373)
T cd06453 232 EEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVR-V----------- 299 (373)
T ss_pred ccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeE-E-----------
Confidence 001111111112222222 223333444555556666665554321 1
Q ss_pred HHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccC
Q 021783 210 ELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE 289 (307)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 289 (307)
..+ +...+++++|.+++.+ ..++.+.|..+||.++.|..+. .| .....| .++++|+|++..
T Consensus 300 --~~~-~~~~~~~~~~~~~~~~-~~~i~~~l~~~gi~i~~g~~~~---~~-----------~~~~~~-~~~~iRis~~~~ 360 (373)
T cd06453 300 --YGD-AEDRAGVVSFNLEGIH-PHDVATILDQYGIAVRAGHHCA---QP-----------LMRRLG-VPGTVRASFGLY 360 (373)
T ss_pred --eCC-ccccCCeEEEEECCcC-HHHHHHHHHHCCEEeccCccch---hH-----------HHHHhC-CCCeEEEEecCC
Confidence 101 1123568888887543 6788888888999988776522 11 011122 256899999998
Q ss_pred ChHHHHHHHHHHH
Q 021783 290 DVNDLISDLDKAL 302 (307)
Q Consensus 290 ~~~~~i~~l~~~l 302 (307)
+.++.++.|.++|
T Consensus 361 ~t~~di~~~~~~l 373 (373)
T cd06453 361 NTEEEIDALVEAL 373 (373)
T ss_pred CCHHHHHHHHhhC
Confidence 8888888887764
No 90
>PRK07550 hypothetical protein; Provisional
Probab=99.95 E-value=3.7e-26 Score=200.75 Aligned_cols=252 Identities=16% Similarity=0.129 Sum_probs=169.3
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.++++++++++++|+||||
T Consensus 102 al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG 177 (386)
T PRK07550 102 AFWAAMVTLAGAGDEVILPLPWYFNHK----MWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTG 177 (386)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCC
Confidence 45 344457899999999999998887 5567899999999873 67889999988899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----CCc----cCCCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----SRP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~----~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
.+++ +++|+++|++||+++|+|++|+.... ... ...+..++++|+||.+ |.+|+|+||++++++ +.
T Consensus 178 ~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~i~~~~~-~~ 255 (386)
T PRK07550 178 VVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSY-ALTGHRVGAVVASPA-RI 255 (386)
T ss_pred cccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhc-cCcccceEeeecCHH-HH
Confidence 9986 88999999999999999999863211 111 1123578899999999 667899999999755 44
Q ss_pred HHHHHHHHhcCCCCChhhHHHHhhccccHHHH----HHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 143 KELYFLQNAEGSGLAPFDCWICLRGVKTMALR----VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+.+...........+...+..+...++.+... .+.+.++.+.+.+.++....+ .+ . ..
T Consensus 256 ~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--------------~~---~-~~ 317 (386)
T PRK07550 256 AEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGW--------------EL---L-AS 317 (386)
T ss_pred HHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc--------------ee---C-CC
Confidence 44444443333334445555555555443222 233444555555666543211 00 0 11
Q ss_pred CCceEEEEeCC-HHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccC---ChHH
Q 021783 219 AGSVLSFLTGS-LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE---DVND 293 (307)
Q Consensus 219 ~~~~~~~~~~~-~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~---~~~~ 293 (307)
.+.++|+.++. ..+..++.+.+ +++||.+.+|..|.. ..++++||+++.. ++++
T Consensus 318 g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRis~~~~~~~~~~~ 376 (386)
T PRK07550 318 GAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGP---------------------GQEGYLRLAFANADVAGIGE 376 (386)
T ss_pred ceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCC---------------------CCCCEEEEEeecCCHHHHHH
Confidence 35566777653 23467787775 567999999886421 0256899999863 3334
Q ss_pred HHHHHH
Q 021783 294 LISDLD 299 (307)
Q Consensus 294 ~i~~l~ 299 (307)
.++.|.
T Consensus 377 ~~~~l~ 382 (386)
T PRK07550 377 LVERLR 382 (386)
T ss_pred HHHHHH
Confidence 444443
No 91
>PLN02656 tyrosine transaminase
Probab=99.95 E-value=9.5e-26 Score=199.21 Aligned_cols=256 Identities=13% Similarity=0.104 Sum_probs=168.4
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.++++++++++++|+||||
T Consensus 108 al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG 183 (409)
T PLN02656 108 AIDVALSMLARPGANILLPRPGFPIYE----LCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCG 183 (409)
T ss_pred HHHHHHHHHhCCCCeEEEeCCCCCcHH----HHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCC
Confidence 44 344557899999999999998776 4456689999988862 67899998888899999999999999
Q ss_pred ccc---cHHHHHHHHHHcCCEEEEeCccCCCCcC--------CccCCCccEEEeccccccccCCCceeEEEEEcC-----
Q 021783 75 QIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS--------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKG----- 138 (307)
Q Consensus 75 ~~~---~~~~l~~~~~~~~~~li~D~a~~~~~~~--------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~----- 138 (307)
.++ ++++|+++|+++|+++|+|++|....+. ........++++||||.| +.+|+|+||+++++
T Consensus 184 ~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f-~~pGlRiG~~i~~~~~~~~ 262 (409)
T PLN02656 184 NVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRW-IVPGWRLGWFVTTDPSGSF 262 (409)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhc-cCcceeEEEEEEeCccccc
Confidence 997 4889999999999999999999732211 112234689999999998 57899999999853
Q ss_pred --hhHHHHHHHHHHhcCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHH
Q 021783 139 --ERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 211 (307)
Q Consensus 139 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~ 211 (307)
+.+.+.+....... ...+...+..+...++ .+....+.+.++.+.+.+.|+..+.. ..
T Consensus 263 ~~~~~~~~~~~~~~~~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~--------------~~ 327 (409)
T PLN02656 263 RDPKIVERIKKYFDIL-GGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCI--------------TC 327 (409)
T ss_pred ccHHHHHHHHHHHhhh-cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCC--------------cC
Confidence 34444444433322 2234444554444443 23333444455555555656543211 00
Q ss_pred HhhhccCCCceEEEEeCCH------HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEE
Q 021783 212 HYSQAKGAGSVLSFLTGSL------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 285 (307)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis 285 (307)
+ .. ...+.++|+.++.. +..+.+.+.+.+.||.+.+|..|. .++++||+
T Consensus 328 ~-~~-p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg-----------------------~~~~iRi~ 382 (409)
T PLN02656 328 P-HK-PEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVG-----------------------LKNWLRIT 382 (409)
T ss_pred C-cC-CCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcC-----------------------CCCeEEEE
Confidence 0 01 11345666666411 112334566677899998887632 14679999
Q ss_pred ecc--CChHHHHHHHHHHHh
Q 021783 286 VGI--EDVNDLISDLDKALR 303 (307)
Q Consensus 286 ~~~--~~~~~~i~~l~~~l~ 303 (307)
++. +.+++.+++|.+.+.
T Consensus 383 ~~~~~e~l~eal~rl~~~~~ 402 (409)
T PLN02656 383 FAADPSSLEEALGRIKSFYL 402 (409)
T ss_pred eCCCHHHHHHHHHHHHHHHH
Confidence 996 445555666666554
No 92
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=2.2e-26 Score=199.44 Aligned_cols=246 Identities=17% Similarity=0.214 Sum_probs=167.4
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC-CceEEEEeCCCCCccccccH
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP-WTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~~ 79 (307)
++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++++++ +++++++++|+||||.+++.
T Consensus 92 ~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~ 167 (351)
T PRK14807 92 IMLAFINKGDVVIYPHPSFAMYS----VYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIER 167 (351)
T ss_pred HHHHhcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCH
Confidence 34457899999999999998665 5567889999999864 67899999874 89999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCC---c-CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCC
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPV---L-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 155 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~---~-~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~ 155 (307)
+++.+++++++.++|+|++|.... . +.....+..++++||||.+ |.+|+|+||++.+++ +.+.+...... ..
T Consensus 168 ~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~~GlRiG~~v~~~~-~~~~~~~~~~~--~~ 243 (351)
T PRK14807 168 EDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAF-GLAGLRVGYAVANEN-ILKYLNLVKSP--YN 243 (351)
T ss_pred HHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhc-ccchhceeeeecCHH-HHHHHHHccCC--CC
Confidence 999999999888999999996321 1 1122345789999999999 778999999998754 54444443321 22
Q ss_pred CChhhHHHHhhcccc--HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHH
Q 021783 156 LAPFDCWICLRGVKT--MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALS 233 (307)
Q Consensus 156 ~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (307)
.+...+..+...++. +....+...++.+.+.+.+++.+++ .+. ...++++++++++ .
T Consensus 244 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~--------------~~~----~~~~~~~~i~~~~---~ 302 (351)
T PRK14807 244 INSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGI--------------KVY----PSKTNFILVKFKD---A 302 (351)
T ss_pred cCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCc--------------EEC----cCCccEEEEEcCC---H
Confidence 344444444444432 2233333444444555555433221 111 1136677777764 4
Q ss_pred HHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHH
Q 021783 234 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKAL 302 (307)
Q Consensus 234 ~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l 302 (307)
..+.+.+.++||.++.+... . ..++++|||++. ++.+++++.|++++
T Consensus 303 ~~~~~~l~~~gV~v~~~~~~---------------------~-~~~~~iRis~~~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 303 DYVYQGLLERGILVRDFSKV---------------------E-GLEGALRITVSSCEANDYLINGLKELL 350 (351)
T ss_pred HHHHHHHHHCCEEEEECCCC---------------------C-CCCCeEEEEcCCHHHHHHHHHHHHHhh
Confidence 56677777778887643210 0 125679999986 56677777776653
No 93
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.95 E-value=7.2e-26 Score=197.48 Aligned_cols=251 Identities=17% Similarity=0.153 Sum_probs=169.6
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcC-------CCceEEEEeCCC
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG-------PWTKLVWVESPT 70 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~-------~~~~~v~~~~~~ 70 (307)
.++.+++++||+|+++.++|++.+ ..++..|++++.++.+ |++++++.++ +++++|++++|+
T Consensus 81 ~~~~~l~~~gd~Vl~~~~~h~s~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~ 156 (370)
T TIGR02539 81 AVMHALCKEGDWVVLDGLAHYTSY----VAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVD 156 (370)
T ss_pred HHHHHhhCCCCEEEECCcccHHHH----HHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCC
Confidence 556678899999999999987776 4567889999999975 8999999885 268899999999
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 71 NPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 71 n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
||+|...|+++|.++|+++|+++++|++|+.|..+ ....++.|++++|+||++++ +.++|+++++++.+ +.+....
T Consensus 157 ~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~--~g~~G~l~~~~~~i-~~l~~~~ 233 (370)
T TIGR02539 157 GEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAA--SGPCGVLGMSEEWE-DIVLRKS 233 (370)
T ss_pred CCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccC--CCCEEEEEECHHHH-hhhcccc
Confidence 99999999999999999999999999999988654 55566899999999999953 33489999986544 3333322
Q ss_pred Hhc--------CCCCChhhHHHHhhccccHHHH---HHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 150 NAE--------GSGLAPFDCWICLRGVKTMALR---VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 150 ~~~--------~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
... +.............+++..... +.+..++.+.+.+.|+... + .+. +. . +.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~g-~-~~~--~~--~----------~s 297 (370)
T TIGR02539 234 RYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDIG-F-IQL--GQ--K----------PK 297 (370)
T ss_pred cCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-c-EEE--cc--C----------CC
Confidence 211 0111111222223333221222 2333444556666666542 1 000 00 0 11
Q ss_pred CCceEEEEeCCH--------HHHHHHHhcCCcceee-cCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe--c
Q 021783 219 AGSVLSFLTGSL--------ALSKHVVETTKYFSIT-VSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV--G 287 (307)
Q Consensus 219 ~~~~~~~~~~~~--------~~~~~~~~~l~~~gi~-v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~--~ 287 (307)
.++++.+.++.. .....+.+.|.++||. +++|. ++++|+|+ +
T Consensus 298 ~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~~---------------------------~~~iRis~~~~ 350 (370)
T TIGR02539 298 EHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSGQ---------------------------TKYFKLSVYGL 350 (370)
T ss_pred cCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCCc---------------------------ceEEEEEecCC
Confidence 356777766432 1234688888888985 44311 34699997 3
Q ss_pred -cCChHHHHHHHHHHHhcC
Q 021783 288 -IEDVNDLISDLDKALRTG 305 (307)
Q Consensus 288 -~~~~~~~i~~l~~~l~~~ 305 (307)
.++++++++.|++.+++.
T Consensus 351 t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 351 TKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 378888888888877653
No 94
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.95 E-value=5.3e-26 Score=200.59 Aligned_cols=262 Identities=18% Similarity=0.153 Sum_probs=167.0
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
.++||+|+++.++|+++...+.. ++..|++++.++.+ |++++++.++++++++++++++||||...|+++|.++
T Consensus 89 ~~~g~~Vi~~~~~h~s~~~~~~~-~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l 167 (402)
T TIGR02006 89 KSKGNHIITSKTEHKAVLDTCRY-LEREGFEVTYLPPKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEI 167 (402)
T ss_pred cCCCCEEEECCCccHHHHHHHHH-HHhcCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHH
Confidence 37899999999999988776654 35579999999863 7999999999889999999999999999999999999
Q ss_pred HHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH------HhcCCCCCh
Q 021783 86 AHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ------NAEGSGLAP 158 (307)
Q Consensus 86 ~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~------~~~~~~~~~ 158 (307)
|+++|+++++|++|+.|..+ +...+++|++++|+||++ ||+| .|+++++++.......... .....+...
T Consensus 168 ~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~-gp~G--~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~ 244 (402)
T TIGR02006 168 CRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIY-GPKG--IGALYVRRKPRVRLEALIHGGGHERGMRSGTLPT 244 (402)
T ss_pred HHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhc-CCCc--eEEEEEccCCCCCCCceecCCCccCCccCCCccH
Confidence 99999999999999999877 777789999999999987 7888 8999888653322111110 011112222
Q ss_pred hhHHHHhhccccHHH----HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc--eEEEEeCCHHH
Q 021783 159 FDCWICLRGVKTMAL----RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS--VLSFLTGSLAL 232 (307)
Q Consensus 159 ~~~~~~~~~l~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 232 (307)
........+++.+.. ..++..+..+.+.+.++..+.+ .+.- +......+ .+.|. ..+
T Consensus 245 ~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v-~~~~-------------~~~~~~p~~~~v~f~--~~~- 307 (402)
T TIGR02006 245 HQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEV-YLNG-------------DLEHRVPGNLNVSFN--YVE- 307 (402)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCE-EEeC-------------CccccCCCeEEEEEe--CcC-
Confidence 222222233333222 2233334444444444443322 1110 00001122 34444 222
Q ss_pred HHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC----CCeEEEEeccCChHHHHHHHHHHHh
Q 021783 233 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 233 ~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
...+...+ .++.++.|..++.. ...++....+.|.. .+++|+|++..++++.++.|.++|+
T Consensus 308 ~~~~~~~l--~~i~v~~G~~c~~~--------~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~ 372 (402)
T TIGR02006 308 GESLIMAL--KDLAVSSGSACTSA--------SLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVK 372 (402)
T ss_pred HHHHHHhc--CCEEEechhhcCCC--------CCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHH
Confidence 34555555 47888888773321 01122234445543 4899999998555555555555543
No 95
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.95 E-value=1.1e-25 Score=204.05 Aligned_cols=255 Identities=15% Similarity=0.162 Sum_probs=165.4
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
.++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.++++++++++++|+||||.++
T Consensus 223 ~~~~~l~~~Gd~Vli~~P~y~~y~----~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~ 298 (517)
T PRK13355 223 LSMSALLDDGDEVLIPSPDYPLWT----ACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALY 298 (517)
T ss_pred HHHHHhCCCCCEEEEcCCCCcCHH----HHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCc
Confidence 344568899999999999998887 5677889999988752 78999999999999999999999999999
Q ss_pred c---HHHHHHHHHHcCCEEEEeCccCCCCc-----CCccCC--C-ccEEEeccccccccCCCceeEEEEEcC-hhH----
Q 021783 78 D---IRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLEL--G-ADIVMHSATKFIAGHSDVMAGVLAVKG-ERL---- 141 (307)
Q Consensus 78 ~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~~~~--~-~d~~~~s~~K~~~g~~g~~~G~~~~~~-~~~---- 141 (307)
+ +++|+++|++||++||+|++|..-.+ ...... + ..++++||||.+ +.+|+|+||++++. ..+
T Consensus 299 ~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~-~~~G~RiG~~i~~~~~~~~~~~ 377 (517)
T PRK13355 299 PREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSH-MIAGYRIGWMILSGNKRIAKDY 377 (517)
T ss_pred CHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhc-cCcccceEEEEeeCchhhHHHH
Confidence 7 88999999999999999999973221 111111 1 346679999999 67899999999642 222
Q ss_pred HHHHHHHHHhcCCCCChhhHHHHhhcccc---HHHHH---HHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhh
Q 021783 142 AKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRV---EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 215 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 215 (307)
.+.+.... ......+...+.++..++.. +.... .+..+..+.+.+.|++. +++.+. .
T Consensus 378 ~~~l~~~~-~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~--------------~g~~~~--~ 440 (517)
T PRK13355 378 IEGLNMLA-NMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAI--------------PGISAV--K 440 (517)
T ss_pred HHHHHHHh-cCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcC--------------CCcccC--C
Confidence 22222111 11122333445555444432 11211 22233334444444432 222211 1
Q ss_pred ccCCCceEEE-EeCCH-----HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-
Q 021783 216 AKGAGSVLSF-LTGSL-----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI- 288 (307)
Q Consensus 216 ~~~~~~~~~~-~~~~~-----~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~- 288 (307)
+ .++++.| +++.. +....+.+.|.+.||.+.+|..|.. ..++++|||+..
T Consensus 441 p--~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~---------------------~~~~~~Ris~~~~ 497 (517)
T PRK13355 441 P--KAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNW---------------------DKPDHFRVVYLPR 497 (517)
T ss_pred C--CeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCC---------------------CCcCEEEEEeCCC
Confidence 1 2444444 66421 2234455667788999998876421 136789999964
Q ss_pred -CChHHHHHHHHHHHhc
Q 021783 289 -EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 -~~~~~~i~~l~~~l~~ 304 (307)
+.+++.+++|.++++.
T Consensus 498 ~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 498 LEDLEDAMDRLADFFSY 514 (517)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 5667777777777754
No 96
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.95 E-value=6.9e-26 Score=198.63 Aligned_cols=257 Identities=19% Similarity=0.209 Sum_probs=171.6
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--------CChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--------~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
++.+++++||+|++++|+|..+. ..++..|++++.++. .|++++++.++++++++++++|+||||.++
T Consensus 99 ~~~~~~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~ 174 (380)
T PRK06225 99 VMRAFLSPGDNAVTPDPGYLIID----NFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSY 174 (380)
T ss_pred HHHHhcCCCCEEEEcCCCCcchH----HHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCC
Confidence 44457889999999999998766 556788999998875 267899999988899999999999999987
Q ss_pred c---HHHHHHHHHHcCCEEEEeCccCC---CCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH
Q 021783 78 D---IRKIAEMAHAHGALLLVDNSIMS---PVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 150 (307)
Q Consensus 78 ~---~~~l~~~~~~~~~~li~D~a~~~---~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~ 150 (307)
+ +++|.++|+++|+++|+|++|.. +... .....+..+++.||||++ |++|+|+|+++++++ +.+.+.....
T Consensus 175 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~-g~~G~RiG~i~~~~~-l~~~~~~~~~ 252 (380)
T PRK06225 175 TEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIF-GMAGLRIGAVVATPD-LIEVVKSIVI 252 (380)
T ss_pred CHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhc-CCccceeEEEecCHH-HHHHHHHHHh
Confidence 5 88999999999999999999852 2111 111225679999999999 778999999999855 4444443332
Q ss_pred hcCCCCChhhHHHHhhcccc---HHHHH-HHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 151 AEGSGLAPFDCWICLRGVKT---MALRV-EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 151 ~~~~~~~~~~~~~~~~~l~~---~~~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
.....+...+..+...+.. +..+. +...++...+.+.|++.+++ .+.. . ...++++++.
T Consensus 253 -~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--------------~~~~-~-~~~g~~~~~~ 315 (380)
T PRK06225 253 -NDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGV--------------FLPV-Y-PSHGNMMVID 315 (380)
T ss_pred -cccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCC--------------cccc-C-CCCCeEEEEE
Confidence 1222333333333333322 11111 11223333344455433211 0000 1 1236677887
Q ss_pred eCC-HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHh
Q 021783 227 TGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 303 (307)
Q Consensus 227 ~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~ 303 (307)
+.. ..+..++.+.+.++||.+++|..+. ...+++++|+|++. +++++.++.|++.++
T Consensus 316 ~~~~~~~~~~l~~~l~~~gi~v~~g~~~~--------------------~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~ 375 (380)
T PRK06225 316 ISEAGIDPEDLVEYLLERKIFVRQGTYTS--------------------KRFGDRYIRVSFSIPREQVEVFCEEFPDVVE 375 (380)
T ss_pred cccccCCHHHHHHHHHHCCEEEcCCcccC--------------------cCCCCceEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 743 1246778888888899998876421 01135689999987 678888888888886
Q ss_pred cC
Q 021783 304 TG 305 (307)
Q Consensus 304 ~~ 305 (307)
++
T Consensus 376 ~~ 377 (380)
T PRK06225 376 TL 377 (380)
T ss_pred Hh
Confidence 54
No 97
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.95 E-value=2.1e-25 Score=197.35 Aligned_cols=256 Identities=14% Similarity=0.109 Sum_probs=169.5
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.+.++++++++++|+||||
T Consensus 116 al~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG 191 (412)
T PTZ00433 116 AILMALTALCDEGDNILVPAPGFPHYE----TVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCG 191 (412)
T ss_pred HHHHHHHHhcCCCCEEEEccCCcccHH----HHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCCCC
Confidence 44 345567899999999999998887 6678889999988862 68899988888899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----C---CccCCCccEEEeccccccccCCCceeEEEEEcC-----
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----S---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKG----- 138 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~----- 138 (307)
.+++ +++|+++|+++|+++|+|++|..... . ........++++||||.+ |.+|+|+||+++.+
T Consensus 192 ~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~-~~pGlRlG~~i~~~p~~~~ 270 (412)
T PTZ00433 192 SNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNL-VVPGWRLGWLLLVDPHGNG 270 (412)
T ss_pred cccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhc-CCCCeeEEEEEEeCCcccH
Confidence 9886 77889999999999999999973221 1 111112468999999999 67899999999731
Q ss_pred hhHHHHHHHHHHhcCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 139 ERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
+.+.+.+...... ....+...+..+...+. .+....+.+.++.+.+.+.|++...+ ...
T Consensus 271 ~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~--------------~~~- 334 (412)
T PTZ00433 271 GDFLDGMKRLGML-VCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGL--------------SPT- 334 (412)
T ss_pred HHHHHHHHHHhhc-cCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCC--------------ccc-
Confidence 2233333333221 12233444443333332 12223334445555555555533211 000
Q ss_pred hhccCCCceEEEEeCCH-----HHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec
Q 021783 214 SQAKGAGSVLSFLTGSL-----ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG 287 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~ 287 (307)
. ...+.+++++++.. ....++.+.+. .+||.+.+|..|. .++++||+++
T Consensus 335 -~-p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-----------------------~~~~iRis~~ 389 (412)
T PTZ00433 335 -M-PRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFH-----------------------MPGFTRLTIS 389 (412)
T ss_pred -C-CCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccC-----------------------CCCeEEEEec
Confidence 1 11356677777531 13567777775 5799998887642 1457999998
Q ss_pred c--CChHHHHHHHHHHHhc
Q 021783 288 I--EDVNDLISDLDKALRT 304 (307)
Q Consensus 288 ~--~~~~~~i~~l~~~l~~ 304 (307)
. +++++.++.|.++++.
T Consensus 390 ~~~e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 390 RPVEVLREAVERIKAFCER 408 (412)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 6 4566677777776653
No 98
>PRK02948 cysteine desulfurase; Provisional
Probab=99.95 E-value=1.5e-25 Score=196.70 Aligned_cols=266 Identities=17% Similarity=0.166 Sum_probs=175.7
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHH
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 86 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~ 86 (307)
++||+|++++.+|+++...+. .++..|++++.++.+ |++++++.+++++++|++++++||||.+.|+++|.++|
T Consensus 86 ~~g~~vv~~~~~h~s~~~~~~-~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~ 164 (381)
T PRK02948 86 QNKKHIITTPMEHASIHSYFQ-SLESQGYTVTEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALL 164 (381)
T ss_pred CCCCEEEECCcccHHHHHHHH-HHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHH
Confidence 679999999999988876664 456789999999863 78999999988899999999999999999999999999
Q ss_pred HHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH----HHHhcCCCCChhhH
Q 021783 87 HAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF----LQNAEGSGLAPFDC 161 (307)
Q Consensus 87 ~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 161 (307)
+++|+++++|++++.|..+ +..++++|++++|+||++ ||+| .|+++++++........ .......+.+....
T Consensus 165 ~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~-gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 241 (381)
T PRK02948 165 KKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIY-GPKG--VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGI 241 (381)
T ss_pred HHcCCEEEEEChhhccccccCcccCCCCEEEecHHhcC-CCCc--EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHH
Confidence 9999999999999988765 667789999999999987 6888 89998886531111100 00011222333333
Q ss_pred HHHhhccccH----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHH
Q 021783 162 WICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVV 237 (307)
Q Consensus 162 ~~~~~~l~~~----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (307)
..+..+++.+ ....++..+..+.+.+.++... + .+...+ .+. .....++.|.+.+.+ ..++.
T Consensus 242 ~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~-~v~~~~---~~~--------~~~~~i~~~~~~~~~-~~~~~ 307 (381)
T PRK02948 242 AAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLP-L-PIEVEG---HST--------SCLPHIIGVTIKGIE-GQYTM 307 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-C-CEEEeC---CCc--------cCcCCEEEEEeCCCC-HHHHH
Confidence 3333333322 3333444555555555555442 1 111110 000 112446677776544 56677
Q ss_pred hcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCC----CCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 238 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL----TEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 238 ~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
..|..+||.++.|..++. + ...++.+..+.|. ..+++|+|++..+.++.++.|.++|+
T Consensus 308 ~~l~~~gI~v~~g~~c~~---~-----~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~ 369 (381)
T PRK02948 308 LECNRRGIAISTGSACQV---G-----KQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALE 369 (381)
T ss_pred HhcccCCEEEEchHhcCC---C-----CCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHH
Confidence 788889999998886321 1 1113334444443 24789999997555555555554443
No 99
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=3.2e-26 Score=200.20 Aligned_cols=245 Identities=16% Similarity=0.195 Sum_probs=168.1
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhc-CCCceEEEEeCCCCCccccccH
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAI-GPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l-~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.+ .++++++++++|+||||..++.
T Consensus 119 ~~~~~~~~gd~Vlv~~P~y~~y~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~ 194 (380)
T PLN03026 119 LMRCVLDPGDKIIDCPPTFGMYV----FDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISD 194 (380)
T ss_pred HHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCH
Confidence 33456799999999999997665 5567789999998763 689999988 6789999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCc-----CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCC
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 154 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~ 154 (307)
+++.++++.. +++|+|++|..... ......+..++++||||.+ |.+|+|+||++++++.+ +.+..... ..
T Consensus 195 ~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~-glaGlRiGy~~~~~~~i-~~l~~~~~--~~ 269 (380)
T PLN03026 195 DDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRA-GLAGLRVGYGAFPLSII-EYLWRAKQ--PY 269 (380)
T ss_pred HHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhh-cCccccceeeecCHHHH-HHHHHhcC--CC
Confidence 9999999865 89999999963211 1222346789999999999 78999999999985544 44433332 12
Q ss_pred CCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHH
Q 021783 155 GLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 231 (307)
Q Consensus 155 ~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (307)
..+...+..+.++++. ++...+.+.+..+.+.+.|+....+ .. . ...++++++++++..
T Consensus 270 ~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~-~----------------p~~~~f~~~~~~~~~ 331 (380)
T PLN03026 270 NVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFL-EP-Y----------------PSDANFILCRVTSGR 331 (380)
T ss_pred CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCC-eE-C----------------CCCCeEEEEECCCCC
Confidence 3344445555555532 2233334444555555556543211 00 1 124678888876422
Q ss_pred HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHH
Q 021783 232 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDK 300 (307)
Q Consensus 232 ~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~ 300 (307)
...++.+.|..+||.++++.. .+ .++++|||++. ++++++++.|++
T Consensus 332 ~~~~~~~~l~~~gI~v~~~~~----------------------~~-~~~~lRis~~~~~~~~~l~~al~~ 378 (380)
T PLN03026 332 DAKKLKEDLAKMGVMVRHYNS----------------------KE-LKGYIRVSVGKPEHTDALMEALKQ 378 (380)
T ss_pred CHHHHHHHHHHCCeEEEECCC----------------------CC-CCCEEEEecCCHHHHHHHHHHHHH
Confidence 366788888788998876542 01 25689999995 355666666654
No 100
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=2e-26 Score=201.24 Aligned_cols=248 Identities=16% Similarity=0.205 Sum_probs=170.8
Q ss_pred HHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHH
Q 021783 7 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKI 82 (307)
Q Consensus 7 ~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l 82 (307)
+.+++++||+|++++|+|..+. ..++..|++++.++.+ |++++++.+++++++|++++|+||||.+++.+++
T Consensus 101 ~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l 176 (367)
T PRK02731 101 ARAYLGPGDEVIYSEHGFAVYP----IAAQAVGAKPVEVPAKDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEV 176 (367)
T ss_pred HHHhcCCCCEEEEecCCHHHHH----HHHHHcCCeEEEecccCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHH
Confidence 3457889999999999996655 4456789999999864 7899999998889999999999999999999999
Q ss_pred HHHHHHc--CCEEEEeCccCCCCcC--------CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhc
Q 021783 83 AEMAHAH--GALLLVDNSIMSPVLS--------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 152 (307)
Q Consensus 83 ~~~~~~~--~~~li~D~a~~~~~~~--------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~ 152 (307)
.++++.+ |+++|+|++|...... ........++++|+||.+ |.+|+|+||++++++ +.+.+......
T Consensus 177 ~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~l~~~~~-~~~~l~~~~~~- 253 (367)
T PRK02731 177 ERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAY-GLAGLRVGYGIAPPE-IIDALNRVRQP- 253 (367)
T ss_pred HHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhh-cCcccceeeeeCCHH-HHHHHHHccCC-
Confidence 9999875 8999999998633211 111224679999999999 678999999999854 44444333221
Q ss_pred CCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC
Q 021783 153 GSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 229 (307)
Q Consensus 153 ~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (307)
...+...+..+...++. ++...+...++.+.+.+.+++.. + ... ...++++++.+++
T Consensus 254 -~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~--------------~~~----~~~g~~~~i~~~~ 313 (367)
T PRK02731 254 -FNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELG-L--------------EYI----PSVGNFILVDFDD 313 (367)
T ss_pred -CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-C--------------ccC----CCCceEEEEECCC
Confidence 12334445555444442 12222233333444444454331 1 000 1136788888854
Q ss_pred HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhc
Q 021783 230 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRT 304 (307)
Q Consensus 230 ~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~ 304 (307)
.....++.+.|.++||.++.+..+. .++++|||++. ++++.+++.|.++++.
T Consensus 314 ~~~~~~~~~~L~~~gI~v~~~~~~~-----------------------~~~~iRis~~~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 314 GKDAAEAYQALLKRGVIVRPVAGYG-----------------------LPNALRITIGTEEENRRFLAALKEFLAA 366 (367)
T ss_pred CCCHHHHHHHHHHCCEEEEeCCCCC-----------------------CCCeEEEecCCHHHHHHHHHHHHHHHhc
Confidence 4447788888888899998765421 14579999985 6778888888777653
No 101
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.95 E-value=2.6e-26 Score=206.58 Aligned_cols=260 Identities=14% Similarity=0.102 Sum_probs=165.9
Q ss_pred HH-HHHHHhc-CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCC------CceEEEEe
Q 021783 3 AL-AAVTHLL-GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGP------WTKLVWVE 67 (307)
Q Consensus 3 al-~~~~~~~-~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~------~~~~v~~~ 67 (307)
|+ .++.+++ +|||+|++++|+|+.+. ..++..|++++.++.+ |++++++++++ ++++++++
T Consensus 150 al~~~~~~l~~~~gD~Vlv~~P~y~~y~----~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~ 225 (481)
T PTZ00377 150 GIKLLLQLLIGDPSDGVMIPIPQYPLYS----AAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVI 225 (481)
T ss_pred HHHHHHHHhccCCCCEEEECCCCchhHH----HHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEE
Confidence 44 3444567 79999999999999888 6677889999998863 67899888863 78999999
Q ss_pred CCCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCc------CCc----cCC-------CccEEEeccccccccCC
Q 021783 68 SPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL------SRP----LEL-------GADIVMHSATKFIAGHS 127 (307)
Q Consensus 68 ~~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~------~~~----~~~-------~~d~~~~s~~K~~~g~~ 127 (307)
+|+||||.+++ +++|+++|++||++||+|++|..-.+ ... ..+ ...++++||||.+.+.+
T Consensus 226 ~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~ 305 (481)
T PTZ00377 226 NPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGEC 305 (481)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCC
Confidence 99999999997 88999999999999999999974221 110 011 14689999999855788
Q ss_pred CceeEEEEE--cChhHHHHHHHHHHhcCCCCChhhHHHHhhcccc----------HHHHHH----HHHHHHHHHHHHHhc
Q 021783 128 DVMAGVLAV--KGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----------MALRVE----KQQDNAQKIAEFLAS 191 (307)
Q Consensus 128 g~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------~~~~~~----~~~~~~~~l~~~l~~ 191 (307)
|+|+||+++ .++.+.+.+....... ...+...+.++...++. +...++ .+.++.+.+.+.|++
T Consensus 306 GlRiG~~~~~~~p~~li~~l~~~~~~~-~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~ 384 (481)
T PTZ00377 306 GRRGGYFELTNIPPEVREQIYKLASIN-LCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNK 384 (481)
T ss_pred cCceEEEEEeCCCHHHHHHHHHHhhee-cCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999987 2455655555544322 12344445544444421 111111 123334444555543
Q ss_pred CCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC--CH-----------HHHHHHHhcCCcceeecCCCCccceeec
Q 021783 192 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--SL-----------ALSKHVVETTKYFSITVSFGSVKSLISM 258 (307)
Q Consensus 192 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----------~~~~~~~~~l~~~gi~v~~g~~~~~~~~ 258 (307)
.+ ++.+. .+ ..+.++++.+. .. .....+...+.+.||.+.+|..|...
T Consensus 385 ~~--------------g~~~~--~p-~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~-- 445 (481)
T PTZ00377 385 IE--------------GVSCQ--PV-EGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQK-- 445 (481)
T ss_pred CC--------------CcEee--cC-CeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCC--
Confidence 32 21111 11 12344443442 11 01122345566789999998875310
Q ss_pred ccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 021783 259 PCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 304 (307)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 304 (307)
..++++|||++. +++++.+++|.+++++
T Consensus 446 ------------------~~~~~~Rls~~~~~e~l~~~l~rl~~~~~~ 475 (481)
T PTZ00377 446 ------------------PGTYHFRITILPPEEQIEEMVKKIKEFHES 475 (481)
T ss_pred ------------------CCCCEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 124689999985 3567777777777653
No 102
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.5e-26 Score=201.12 Aligned_cols=245 Identities=20% Similarity=0.236 Sum_probs=169.5
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC-CCceEEEEeCCCCCccccccH
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG-PWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~ 79 (307)
++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.+. .+++++++++|+||||.+++.
T Consensus 97 ~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~ 172 (356)
T PRK04870 97 LALACAKPGATVLAPEPGFVMYR----MSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDD 172 (356)
T ss_pred HHHHhcCCCCEEEECCCCHHHHH----HHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCH
Confidence 33456799999999999998776 6678899999999874 6899999986 589999999999999999998
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCC----cCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCC
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPV----LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 155 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~----~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~ 155 (307)
+++.++++..++++|+|++|.... .+.....+..+++.|+|| + +.+|+|+||++++++.+ +.+..... ...
T Consensus 173 ~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~-~~~GlRiG~~i~~~~~i-~~~~~~~~--~~~ 247 (356)
T PRK04870 173 ADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-L-GLAGLRLGYLAGHPAWI-AELDKVRP--PYN 247 (356)
T ss_pred HHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-h-hhHHHhhhhhhCCHHHH-HHHHHccC--CCc
Confidence 888888887789999999996321 112233456899999999 6 67899999999875543 33433321 122
Q ss_pred CChhhHHHHhhccc---cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHH
Q 021783 156 LAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLAL 232 (307)
Q Consensus 156 ~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (307)
.+...+..+...++ .++...+.+.++.+.+.+.+++.+++ .+ . ...++++++.+++
T Consensus 248 ~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~-~----------------~~~~~~~~~~~~~--- 306 (356)
T PRK04870 248 VNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGV-TV-F----------------PSAANFILVRVPD--- 306 (356)
T ss_pred CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCc-EE-C----------------CCCCeEEEEECCC---
Confidence 33333444333333 23333445555666666666544322 11 1 1136688888762
Q ss_pred HHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHH
Q 021783 233 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKA 301 (307)
Q Consensus 233 ~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~ 301 (307)
...+.+.+.++||.++.|..|. +..++++|||++. ++++++++.|.+.
T Consensus 307 ~~~~~~~l~~~gI~v~~~~~f~---------------------~~~~~~iRis~~~~~~~~~l~~al~~~ 355 (356)
T PRK04870 307 AAAVFDGLKTRGVLVKNLSGMH---------------------PLLANCLRVTVGTPEENAQFLAALKAA 355 (356)
T ss_pred HHHHHHHHHHCCEEEEECCCCC---------------------CCCCCeEEEeCCCHHHHHHHHHHHHHh
Confidence 4567788888999998776531 0125689999985 5666666666554
No 103
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.95 E-value=2.1e-25 Score=196.85 Aligned_cols=254 Identities=14% Similarity=0.076 Sum_probs=169.1
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
.++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.++++++++++++|+||||.++
T Consensus 110 ~~~~~l~~~gd~v~i~~P~y~~~~----~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~ 185 (401)
T TIGR01264 110 MCIAALANAGQNILVPRPGFPLYE----TLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVF 185 (401)
T ss_pred HHHHHhCCCCCEEEEeCCCChhHH----HHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCC
Confidence 444567899999999999998777 6677889999888652 68899988888889999999999999998
Q ss_pred c---HHHHHHHHHHcCCEEEEeCccCCCCc-----C---CccCCCccEEEeccccccccCCCceeEEEEEcCh--h---H
Q 021783 78 D---IRKIAEMAHAHGALLLVDNSIMSPVL-----S---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--R---L 141 (307)
Q Consensus 78 ~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~--~---~ 141 (307)
+ +++|+++|+++|+++|+|++|..... . ........++++||||.+ +.+|+|+||++++++ . .
T Consensus 186 ~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~~~GlRiG~iv~~~~~~~~~~~ 264 (401)
T TIGR01264 186 SRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRW-LVPGWRLGWIIIHDRRGILRDI 264 (401)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccC-CCccceEEEEEecCcchhHHHH
Confidence 5 88899999999999999999973221 1 111112368999999998 678999999998752 1 2
Q ss_pred HHHHHHHHHhcCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhc
Q 021783 142 AKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 216 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 216 (307)
.+.+..... .....+...+..+...+. .++...+.+.++.+.+.+.|+..+++ .. ..
T Consensus 265 ~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~--------------~~--~~- 326 (401)
T TIGR01264 265 RDGLVKLSQ-RILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGL--------------RP--VM- 326 (401)
T ss_pred HHHHHHHhh-ccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCC--------------cc--cC-
Confidence 222222221 112223333444333332 22333444455555566666543211 00 01
Q ss_pred cCCCceEEEEeCC-----HHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--
Q 021783 217 KGAGSVLSFLTGS-----LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-- 288 (307)
Q Consensus 217 ~~~~~~~~~~~~~-----~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-- 288 (307)
...+.++++.++. .....++.+.+ +.+||.+.+|..|. .++++||+++.
T Consensus 327 p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~-----------------------~~~~iRis~~~~~ 383 (401)
T TIGR01264 327 PSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFE-----------------------YPGFFRVVLTVPV 383 (401)
T ss_pred CCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcC-----------------------CCCeEEEEEcCCH
Confidence 1246677777642 11245666665 46899998887532 14679999986
Q ss_pred CChHHHHHHHHHHHhc
Q 021783 289 EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 ~~~~~~i~~l~~~l~~ 304 (307)
+++++.+++|.+.+++
T Consensus 384 ~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 384 VMMEEACSRIQEFCER 399 (401)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 5677778888887765
No 104
>PRK09265 aminotransferase AlaT; Validated
Probab=99.95 E-value=2.7e-25 Score=196.32 Aligned_cols=258 Identities=16% Similarity=0.112 Sum_probs=168.0
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
.++.+++++||+|++++|+|+.+. ..++..|.+++.++.+ |++++++.++++++++++++|+||||.++
T Consensus 110 ~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~ 185 (404)
T PRK09265 110 MAMQALLNNGDEVLVPAPDYPLWT----AAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVY 185 (404)
T ss_pred HHHHHhCCCCCEEEEeCCCCcChH----HHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCC
Confidence 344557899999999999998877 5556678888877542 67889999888899999999999999999
Q ss_pred c---HHHHHHHHHHcCCEEEEeCccCCCCc-----CCc---cCCCccEEEeccccccccCCCceeEEEEEc-ChhHHH-H
Q 021783 78 D---IRKIAEMAHAHGALLLVDNSIMSPVL-----SRP---LELGADIVMHSATKFIAGHSDVMAGVLAVK-GERLAK-E 144 (307)
Q Consensus 78 ~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~---~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~-~~~~~~-~ 144 (307)
+ +++|+++|+++|+++|+|++|..-.+ ... ......++++||||.+ +.+|+|+||++.+ ++...+ .
T Consensus 186 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~pGlRiG~~v~~~~~~~~~~~ 264 (404)
T PRK09265 186 SKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAY-RVAGFRVGWMVLSGPKKHAKGY 264 (404)
T ss_pred CHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhc-cCcccceEEEEEeCchHHHHHH
Confidence 8 88999999999999999999863211 111 1112468899999999 6689999999974 332211 1
Q ss_pred HHHHH--HhcCCCCChhhHHHHhhcccc---HHHH---HHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhc
Q 021783 145 LYFLQ--NAEGSGLAPFDCWICLRGVKT---MALR---VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 216 (307)
Q Consensus 145 ~~~~~--~~~~~~~~~~~~~~~~~~l~~---~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 216 (307)
..... .......+...+.++...+.. .... .+...++.+.+.+.|+..+ ++... .
T Consensus 265 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~--------------~~~~~--~- 327 (404)
T PRK09265 265 IEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIP--------------GVSCV--K- 327 (404)
T ss_pred HHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCC--------------CCccc--C-
Confidence 11111 112223334444544444432 1111 1233344444555554322 11111 1
Q ss_pred cCCCceEEEEeCCH-----HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--C
Q 021783 217 KGAGSVLSFLTGSL-----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--E 289 (307)
Q Consensus 217 ~~~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~ 289 (307)
...+.++++.++.. ...+.+.+.+..+||.+.+|..|.. ..++++|++++. +
T Consensus 328 p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~---------------------~~~~~~Ri~~~~~~e 386 (404)
T PRK09265 328 PKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNW---------------------PEPDHFRIVTLPRVD 386 (404)
T ss_pred CCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCC---------------------CCCCeEEEEeCCCHH
Confidence 12355666677532 2345566778888999988876421 125689999974 5
Q ss_pred ChHHHHHHHHHHHhcC
Q 021783 290 DVNDLISDLDKALRTG 305 (307)
Q Consensus 290 ~~~~~i~~l~~~l~~~ 305 (307)
.+++.+++|.+.++..
T Consensus 387 ~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 387 DLEEAIGRIGRFLSGY 402 (404)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6778888888887654
No 105
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.94 E-value=3.4e-25 Score=195.50 Aligned_cols=256 Identities=17% Similarity=0.120 Sum_probs=170.4
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-------CChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|+.+. ..++..|++++.++. .|++++++.+.++++++++++|+||||
T Consensus 108 al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG 183 (403)
T TIGR01265 108 AIEICIEALANPGANILVPRPGFPLYD----TRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCG 183 (403)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCchhHH----HHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCC
Confidence 44 344557799999999999998766 556778999988865 268999998888899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC--------CccCCCccEEEeccccccccCCCceeEEEEEcCh--hH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS--------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--RL 141 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~--------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~--~~ 141 (307)
.+++ +++|.++|+++|+++|+|++|+..... ........++++||||.+ +.+|+|+||+++.++ .+
T Consensus 184 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~pGlRiG~~v~~~~~~~~ 262 (403)
T TIGR01265 184 SVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRW-VVPGWRLGWIIIHDPHGIF 262 (403)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeeccccc-CCCcceEEEEEEeCchhhh
Confidence 9986 889999999999999999999733211 111223579999999998 567999999998532 22
Q ss_pred H----HHHHHHHHhcCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHH
Q 021783 142 A----KELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 212 (307)
Q Consensus 142 ~----~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~ 212 (307)
. +.+...... ....+...+..+...++ .++...+++.++.+.+.+.|+..+++ .+.
T Consensus 263 ~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~------------- 327 (403)
T TIGR01265 263 RDTVLQGLKNLLQR-ILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGL-VCP------------- 327 (403)
T ss_pred HHHHHHHHHHHhhh-hcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCc-eec-------------
Confidence 2 222222211 12233344444443332 23334555566666666666654322 110
Q ss_pred hhhccCCCceEEEEeCCH-----HHHHHHHhc-CCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe
Q 021783 213 YSQAKGAGSVLSFLTGSL-----ALSKHVVET-TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 286 (307)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 286 (307)
. ...+.+++++++.. .+..++.+. ++..||.+.+|..|. .++++||++
T Consensus 328 --~-p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~-----------------------~~~~iRis~ 381 (403)
T TIGR01265 328 --K-PEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFG-----------------------LPNWVRITI 381 (403)
T ss_pred --C-CCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccC-----------------------CCCeEEEEe
Confidence 0 12467778877532 135567666 467899999887632 156799999
Q ss_pred cc--CChHHHHHHHHHHHhc
Q 021783 287 GI--EDVNDLISDLDKALRT 304 (307)
Q Consensus 287 ~~--~~~~~~i~~l~~~l~~ 304 (307)
+. +.+++.++.|.+++++
T Consensus 382 ~~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 382 TVPESMLEEACSRIKEFCER 401 (403)
T ss_pred cCCHHHHHHHHHHHHHHHHh
Confidence 86 3555556666665543
No 106
>PRK07337 aminotransferase; Validated
Probab=99.94 E-value=4.7e-25 Score=193.89 Aligned_cols=254 Identities=18% Similarity=0.163 Sum_probs=166.2
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++..++++||+|++++|+|+++. ..++..|++++.++.+ |++++++.++++++++++++|+||||
T Consensus 102 al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG 177 (388)
T PRK07337 102 ALLLACLALVERGDEVLMPDPSYPCNR----HFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTG 177 (388)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCchhhH----HHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCC
Confidence 44 344457899999999999999887 4556678899888863 67899999988999999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC----CccCC-CccEEEeccccccccCCCceeEEEEEcChhHHHHHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 146 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~----~~~~~-~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~ 146 (307)
.+++ +++|+++|+++++++|+|++|..-... ..... +..++++|+||.+ |.+|+|+||++++++ +.+.+.
T Consensus 178 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~~G~RiG~~~~~~~-l~~~l~ 255 (388)
T PRK07337 178 TSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYF-NMTGWRLGWLVVPEA-LVGTFE 255 (388)
T ss_pred cCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhc-CCchhheeeeecCHH-HHHHHH
Confidence 9986 788899999999999999998632211 11122 3457899999999 678999999999855 444454
Q ss_pred HHHHhcCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 147 FLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
..........+...+..+...+. .+....+.+.++.+.+.+.|+... + ..+. . ...+.
T Consensus 256 ~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~-~--------------~~~~-~-p~~g~ 318 (388)
T PRK07337 256 KLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLG-F--------------KVPV-M-PDGAF 318 (388)
T ss_pred HHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcC-C--------------cccc-C-CCeeE
Confidence 44433333333434444333332 122223334444455555555431 1 0000 1 12466
Q ss_pred eEEEEeCCH-----HHHHHHHhc-CCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHH
Q 021783 222 VLSFLTGSL-----ALSKHVVET-TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLI 295 (307)
Q Consensus 222 ~~~~~~~~~-----~~~~~~~~~-l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i 295 (307)
+++++++.. .+..++.+. ++..||.+.+|..|.. ...++++||+++. +.+.+.
T Consensus 319 f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~--------------------~~~~~~~Ri~~~~-~~~~l~ 377 (388)
T PRK07337 319 YVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGP--------------------HAPRDYIRLSYAT-SMSRLE 377 (388)
T ss_pred EEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCC--------------------CCCCCEEEEEecC-CHHHHH
Confidence 778877531 235566655 5678999998876431 0125789999996 344444
Q ss_pred HHHHH
Q 021783 296 SDLDK 300 (307)
Q Consensus 296 ~~l~~ 300 (307)
+.+++
T Consensus 378 ~~l~r 382 (388)
T PRK07337 378 EAVAR 382 (388)
T ss_pred HHHHH
Confidence 44433
No 107
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.94 E-value=2.2e-25 Score=196.23 Aligned_cols=244 Identities=18% Similarity=0.173 Sum_probs=163.0
Q ss_pred HH-HHHHHhcCCCCe--EEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCC
Q 021783 3 AL-AAVTHLLGTGEE--IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNP 72 (307)
Q Consensus 3 al-~~~~~~~~~gd~--Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~ 72 (307)
|+ .++.++++|||+ |++++|+|+.+. ..++..|++++.++.+ |++++++.+.++++++++++|+||
T Consensus 102 al~~~~~~l~~~gd~~~vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NP 177 (393)
T TIGR03538 102 ALFAFAQAVINPGQAPLVVMPNPFYQIYE----GAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNP 177 (393)
T ss_pred HHHHHHHHHcCCCCcceEEecCCCCcchH----HHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCC
Confidence 44 344457899986 999999998877 5577889999999862 678888888778999999999999
Q ss_pred cccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC------C----c-----cCCCccEEEeccccccccCCCceeEEE
Q 021783 73 RQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS------R----P-----LELGADIVMHSATKFIAGHSDVMAGVL 134 (307)
Q Consensus 73 tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~------~----~-----~~~~~d~~~~s~~K~~~g~~g~~~G~~ 134 (307)
||.+++ +++|+++|++||++||+|++|...... . . ...+..++++|+||.+ +.+|+|+||+
T Consensus 178 tG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~-~~~GlRvG~~ 256 (393)
T TIGR03538 178 TGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRS-NLPGLRSGFV 256 (393)
T ss_pred cCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhc-CCcccceEEE
Confidence 999997 788999999999999999999732211 1 0 1234679999999988 6689999999
Q ss_pred EEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccc---cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHH
Q 021783 135 AVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 211 (307)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~ 211 (307)
+++++ +.+.+...........+...+..+...+. .++...+.+.+..+.+.+.|++.- .+.
T Consensus 257 i~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~---~~~------------ 320 (393)
T TIGR03538 257 AGDAE-ILKAFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQVL---DLE------------ 320 (393)
T ss_pred ecCHH-HHHHHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhhC---ccc------------
Confidence 98755 44444444443333334444444333332 233334444555555555555320 000
Q ss_pred HhhhccCCCceEEEEeCCHHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 212 HYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
. ...+.+++++++ . ...++.+.+ +++||.+.+|..|...... .....+++|||++.
T Consensus 321 ---~-p~gg~f~~~~~~-~-~~~~~~~~l~~~~gV~v~pg~~f~~~~~~---------------~~~~~~~~Ris~~~ 377 (393)
T TIGR03538 321 ---L-PDAGFYLWPKVP-G-DDEAFARALYEEENVTVLPGRFLAREAEG---------------VNPGEGRVRIALVA 377 (393)
T ss_pred ---C-CCeeEEEEEECC-C-CHHHHHHHHHHHCCEEEeCCccccccccC---------------CCCCCCEEEEEecC
Confidence 1 124667777776 2 245677666 4579999999875321000 01125789999985
No 108
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=4e-26 Score=198.77 Aligned_cols=244 Identities=19% Similarity=0.246 Sum_probs=168.6
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
++.+++++||+|++++|+|+.+. ..+...|++++.++.+ |++++++.++++++++++++|+||||.+++.++
T Consensus 97 ~~~~~~~~gd~v~~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~ 172 (359)
T PRK03158 97 ISRALLNPGTNTVMAEPTFSQYR----HNAIIEGAEVREVPLKDGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEE 172 (359)
T ss_pred HHHHHhCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEEecCCCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHH
Confidence 33457799999999999998776 5566789999999874 789999888889999999999999999999999
Q ss_pred HHHHHHH--cCCEEEEeCccCCCCcC--------CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh
Q 021783 82 IAEMAHA--HGALLLVDNSIMSPVLS--------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 151 (307)
Q Consensus 82 l~~~~~~--~~~~li~D~a~~~~~~~--------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~ 151 (307)
+.++++. +|+++|+|++|...... .....+.+++++||||.+ |.+|+|+||++++++ +.+.+......
T Consensus 173 l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~~v~~~~-~~~~~~~~~~~ 250 (359)
T PRK03158 173 LLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAY-GLAALRVGYGIASEE-LIEKLNIARPP 250 (359)
T ss_pred HHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhh-cCcchhhehhcCCHH-HHHHHHHhcCC
Confidence 9999887 59999999999643211 112346789999999999 678999999998755 44444433321
Q ss_pred cCCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC
Q 021783 152 EGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 228 (307)
Q Consensus 152 ~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (307)
...+...+..+...++. .+...+...+..+.+.+.+++. .+ .+ . +..+.++++.+.
T Consensus 251 --~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~-~~-~----------------~~~g~~i~~~~~ 309 (359)
T PRK03158 251 --FNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GL-FY-Y----------------PSQTNFIFVDTG 309 (359)
T ss_pred --CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CC-ee-C----------------CCcCcEEEEECC
Confidence 23444555555555542 1122222333344444444432 11 00 0 113567777764
Q ss_pred CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHH
Q 021783 229 SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKA 301 (307)
Q Consensus 229 ~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~ 301 (307)
. ...++.+.+.++||.+++|..|. .++++||+++. ++++++++.|+++
T Consensus 310 ~--~~~~~~~~l~~~gv~v~~g~~f~-----------------------~~~~iRi~~~~~~~~~~l~~al~~~ 358 (359)
T PRK03158 310 R--DANELFEALLKKGYIVRSGAALG-----------------------FPTGVRITIGLKEQNDKIIELLKEL 358 (359)
T ss_pred C--CHHHHHHHHHHCCeEEeeCCCCC-----------------------CCCeEEEecCCHHHHHHHHHHHHHh
Confidence 2 25667777777899999887632 14679999985 6777777777664
No 109
>PRK08363 alanine aminotransferase; Validated
Probab=99.94 E-value=1.8e-25 Score=197.05 Aligned_cols=258 Identities=17% Similarity=0.147 Sum_probs=166.3
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEe-cC------CChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV-NT------CDLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v-~~------~d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|+.+. ..++..|.+++.+ +. .|++++++.+.++++++++++|+||||
T Consensus 105 al~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG 180 (398)
T PRK08363 105 ALQLIFGALLDPGDEILIPGPSYPPYT----GLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTG 180 (398)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchH----HHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCC
Confidence 44 344567899999999999999887 5667788888777 33 267889998888899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-------CccCCCccEEEeccccccccCCCceeEEEEE-cChhHHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-------RPLELGADIVMHSATKFIAGHSDVMAGVLAV-KGERLAK 143 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~-~~~~~~~ 143 (307)
.+++ +++|.++|+++|+++|+|++|+...+. ........++++||||.+ +.+|+|.||+++ .++.+.+
T Consensus 181 ~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~~~GlRiG~~~~~~~~~~~~ 259 (398)
T PRK08363 181 ALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVY-FATGWRLGYIYFVDPEGKLA 259 (398)
T ss_pred cCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhcc-CCccceEEEEEEeCcHHHHH
Confidence 9987 889999999999999999999732211 111223578899999998 568999999998 2333333
Q ss_pred HHHHH-HHh--cCCCCChhhHHHHhhccc----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhc
Q 021783 144 ELYFL-QNA--EGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 216 (307)
Q Consensus 144 ~~~~~-~~~--~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 216 (307)
.+... ... .....+...+..+...+. .+....+.+.++.+.+.+.|+..+.+ .+. .
T Consensus 260 ~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~--------------~~~--~- 322 (398)
T PRK08363 260 EVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGI--------------STT--K- 322 (398)
T ss_pred HHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCC--------------Eec--C-
Confidence 22221 111 111233333443333332 23333445555555666666543221 110 1
Q ss_pred cCCCceEEE-EeCC---HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CC
Q 021783 217 KGAGSVLSF-LTGS---LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--ED 290 (307)
Q Consensus 217 ~~~~~~~~~-~~~~---~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~ 290 (307)
..++++.| .+++ ....+.+...+..+||.+.+|..|.. ..++++|||++. ++
T Consensus 323 -p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~---------------------~~~~~iRis~~~~~~~ 380 (398)
T PRK08363 323 -PQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGE---------------------YGAGHFRLVFLPPVEI 380 (398)
T ss_pred -CCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCC---------------------CCCCeEEEEecCCHHH
Confidence 12445444 5653 12233334556788999988876421 125689999974 45
Q ss_pred hHHHHHHHHHHHhc
Q 021783 291 VNDLISDLDKALRT 304 (307)
Q Consensus 291 ~~~~i~~l~~~l~~ 304 (307)
+++.++.|.+.+++
T Consensus 381 l~~~l~~l~~~~~~ 394 (398)
T PRK08363 381 LEEAMDRFEEFMRE 394 (398)
T ss_pred HHHHHHHHHHHHHH
Confidence 66667777776653
No 110
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.3e-25 Score=195.64 Aligned_cols=260 Identities=20% Similarity=0.193 Sum_probs=170.2
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC--------ChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--------d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
|+ .++..++++||+|++++|.|+.+. ..++..|++++.++.+ +++++++++++++++|++++|+|||
T Consensus 100 al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPt 175 (397)
T PRK07568 100 AILFAMMAICDPGDEILVPEPFYANYN----GFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPT 175 (397)
T ss_pred HHHHHHHHhcCCCCEEEEecCCCccHH----HHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCC
Confidence 44 344456899999999999998766 4566789999988862 3588999888889999999999999
Q ss_pred ccccc---HHHHHHHHHHcCCEEEEeCccCCCC-----cC---CccC-CCccEEEeccccccccCCCceeEEEEEcChhH
Q 021783 74 QQICD---IRKIAEMAHAHGALLLVDNSIMSPV-----LS---RPLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 74 G~~~~---~~~l~~~~~~~~~~li~D~a~~~~~-----~~---~~~~-~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
|.+++ +++|+++|+++|+++|+|++|.... .. .... .+..+++.|+||.+ +.+|+|+||++++++.+
T Consensus 176 G~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~-~~~G~R~G~~~~~~~~~ 254 (397)
T PRK07568 176 GVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRY-SACGARIGCLISKNKEL 254 (397)
T ss_pred CccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhc-cCCCcceEEEecCCHHH
Confidence 99985 7899999999999999999996321 11 1111 34679999999999 66799999999875555
Q ss_pred HHHHHHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhcc
Q 021783 142 AKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 217 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (307)
.+.+...... ....+...+..+...++. ++...+.+.++.+.+.+.|++.+.+ .+ . .+
T Consensus 255 ~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~-------------~--~p- 316 (397)
T PRK07568 255 IAAAMKLCQA-RLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGV-VC-------------E--KP- 316 (397)
T ss_pred HHHHHHHhhc-cCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc-ee-------------c--CC-
Confidence 5444333221 122333344444444432 2233344455555666666543211 00 0 11
Q ss_pred CCCceEEEEeCCHHHHHHHHhcCC------cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--C
Q 021783 218 GAGSVLSFLTGSLALSKHVVETTK------YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--E 289 (307)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~l~------~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~ 289 (307)
..+.+++++++.. ...++.+.+. ..||.+.+|..|... .+.+++++|||++. +
T Consensus 317 ~g~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~------------------~~~~~~~iRls~~~~~~ 377 (397)
T PRK07568 317 KGAFYIIAKLPVD-DAEDFAKWLLTDFNYNGETVMVAPASGFYAT------------------PGLGKNEIRIAYVLNEE 377 (397)
T ss_pred CcceEEEEecCCC-CHHHHHHHHHhhcccccceEEEeCchHhcCC------------------CCCCCCeEEEEEeCCHH
Confidence 1244567777532 2444444442 368988888764210 12235789999974 6
Q ss_pred ChHHHHHHHHHHHhc
Q 021783 290 DVNDLISDLDKALRT 304 (307)
Q Consensus 290 ~~~~~i~~l~~~l~~ 304 (307)
++++.++.|.+++++
T Consensus 378 ~~~~~~~~l~~~l~~ 392 (397)
T PRK07568 378 DLKRAMEILKEALEK 392 (397)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777778888877764
No 111
>PRK07683 aminotransferase A; Validated
Probab=99.94 E-value=4.7e-25 Score=193.60 Aligned_cols=252 Identities=19% Similarity=0.193 Sum_probs=165.5
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCcccccc-
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICD- 78 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~- 78 (307)
++..++++||+|++++|+|+.+. ..++..|++++.++.+ |.+++++.+.++++++++++|+||||.+++
T Consensus 105 ~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~ 180 (387)
T PRK07683 105 AFRTILEPGTEVILPAPIYPGYE----PIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSK 180 (387)
T ss_pred HHHHhCCCCCEEEEcCCCccchH----HHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCH
Confidence 44457899999999999998877 5566789999999864 568899988888999999999999999986
Q ss_pred --HHHHHHHHHHcCCEEEEeCccCCCCcC----Cc----cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH
Q 021783 79 --IRKIAEMAHAHGALLLVDNSIMSPVLS----RP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 148 (307)
Q Consensus 79 --~~~l~~~~~~~~~~li~D~a~~~~~~~----~~----~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~ 148 (307)
+++|+++|+++|+++|+|++|+..... .. ...+.+++++|+||.+ |.+|+|+||++++++ +.+.+...
T Consensus 181 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~-~~pGlRiG~i~~~~~-l~~~~~~~ 258 (387)
T PRK07683 181 EELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSH-SMTGWRIGFLFAPSY-LAKHILKV 258 (387)
T ss_pred HHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccc-cCccceeEEEEcCHH-HHHHHHHH
Confidence 889999999999999999999743211 11 1224689999999999 667999999999865 44444433
Q ss_pred HHhcCCCCChhhHHHHhhccc----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 149 QNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
........+...+..+...+. ..+...+.+.++...+.+.++... +.-. ...++++.
T Consensus 259 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------~~~~----------~~~~~~~~ 319 (387)
T PRK07683 259 HQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMG---------LDVE----------KPTGAFYL 319 (387)
T ss_pred HHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC---------Cccc----------CCCeeEEE
Confidence 333333333334444333332 122223344455555555555321 1000 11244444
Q ss_pred -EEeCC-HHHHHHHHhc-CCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHH
Q 021783 225 -FLTGS-LALSKHVVET-TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLD 299 (307)
Q Consensus 225 -~~~~~-~~~~~~~~~~-l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~ 299 (307)
..+.. ......+..+ ++.+||.+.+|..|.. ..++++||+++. +++.+.+++|.
T Consensus 320 ~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~---------------------~~~~~~Ri~~~~~~~~~~~al~~l~ 378 (387)
T PRK07683 320 FPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSE---------------------YGEGYVRLSYAYSIETLKEGLDRLE 378 (387)
T ss_pred EEecccCCCCHHHHHHHHHHhCCEEEcCchhhCC---------------------CCCCeEEEEecCCHHHHHHHHHHHH
Confidence 44432 1123445443 5778999998876431 125789999996 44555566666
Q ss_pred HHHh
Q 021783 300 KALR 303 (307)
Q Consensus 300 ~~l~ 303 (307)
+.++
T Consensus 379 ~~l~ 382 (387)
T PRK07683 379 AFLQ 382 (387)
T ss_pred HHHH
Confidence 6554
No 112
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.1e-25 Score=195.87 Aligned_cols=248 Identities=19% Similarity=0.214 Sum_probs=168.3
Q ss_pred HHHHhcCCC-CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC--------ChHHHHhhc-CCCceEEEEeCCCCCccc
Q 021783 6 AVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAI-GPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 6 ~~~~~~~~g-d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--------d~~~l~~~l-~~~~~~v~~~~~~n~tG~ 75 (307)
++.+++++| |+|++++|.|+.+. ..++..|++++.++.+ |++++.+.+ .++++++++++|+||||.
T Consensus 92 ~~~~~~~~g~~~vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~ 167 (364)
T PRK04781 92 LVRALCVPGRDAVLVTPPVFGMYA----VCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGS 167 (364)
T ss_pred HHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCC
Confidence 444567888 79999999987665 5567789999999862 456665544 578999999999999999
Q ss_pred cccHHHHHHHHHH--cCCEEEEeCccCCCCc-----CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH
Q 021783 76 ICDIRKIAEMAHA--HGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 148 (307)
Q Consensus 76 ~~~~~~l~~~~~~--~~~~li~D~a~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~ 148 (307)
+++.+++.++++. +++++|+|++|..... ......+..++++||||.+ |.+|+|+||++++++ +.+.+...
T Consensus 168 ~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~-gl~GlRvGy~v~~~~-l~~~l~~~ 245 (364)
T PRK04781 168 AIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAH-ALAAARIGSLIANAE-LIAVLRRC 245 (364)
T ss_pred CcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhc-ccccceeeeeeCCHH-HHHHHHhc
Confidence 9998888888765 3789999999973321 1123346789999999999 778999999998755 44545444
Q ss_pred HHhcCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceE
Q 021783 149 QNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 223 (307)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 223 (307)
.... ..+...+..+...++ .+....+...++.+.+.+.|+..+.+..+ . +..+.++
T Consensus 246 ~~~~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~----------------p~~g~f~ 306 (364)
T PRK04781 246 QAPY--PVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRV-Y----------------PSQGNFL 306 (364)
T ss_pred cCCC--CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE-C----------------CCCCcEE
Confidence 3322 223333333333332 22333444555566666666644321111 1 1246788
Q ss_pred EEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHH
Q 021783 224 SFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKAL 302 (307)
Q Consensus 224 ~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l 302 (307)
++++++ ..++.+.+..+||.++.|..+. + .++++||+++. ++.+++++.|++..
T Consensus 307 ~~~~~~---~~~~~~~l~~~gI~v~~~~~~~---------------------~-~~~~~Ris~~~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 307 LVRFDD---AEAAFQALLAAGVVVRDQRAAP---------------------R-LSDALRITLGTPEQNDRVLAALQRTQ 361 (364)
T ss_pred EEEcCC---HHHHHHHHHHCCeEEeeCCCCC---------------------C-CCCeEEEeCCCHHHHHHHHHHHHHHH
Confidence 888863 4567777888999998876421 1 25679999997 67788888887654
Q ss_pred h
Q 021783 303 R 303 (307)
Q Consensus 303 ~ 303 (307)
.
T Consensus 362 ~ 362 (364)
T PRK04781 362 A 362 (364)
T ss_pred h
Confidence 3
No 113
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=4.7e-26 Score=195.84 Aligned_cols=246 Identities=15% Similarity=0.165 Sum_probs=161.2
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcCCCceEEEEeCCCCCcccccc
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 78 (307)
++..+..++++|+ |++++|+|+.+. ..++..|++++.+|.+ |.+.++ ..+++++++++|+||||.+++
T Consensus 69 ~l~~~~~~~~~~~-vv~~~P~y~~y~----~~~~~~G~~v~~vp~~~~~~~~~~l~---~~~~k~v~l~nP~NPTG~~~s 140 (332)
T PRK06425 69 FIYRLLSYINVGN-IIIVEPNFNEYK----GYAFTHGIRISALPFNLINNNPEILN---NYNFDLIFIVSPDNPLGNLIS 140 (332)
T ss_pred HHHHHHHHhCCCc-EEEeCCChHHHH----HHHHHcCCeEEEEeCCcccCcHHHHh---hcCCCEEEEeCCCCCcCCccC
Confidence 3433344567764 667799998888 7788899999999875 233332 247899999999999999997
Q ss_pred ---HHHHHHHHHHcCCEEEEeCccCCCCcC-------CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH
Q 021783 79 ---IRKIAEMAHAHGALLLVDNSIMSPVLS-------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 148 (307)
Q Consensus 79 ---~~~l~~~~~~~~~~li~D~a~~~~~~~-------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~ 148 (307)
+++|+++|+++|+++|+|++|...... .....+..++++||||.+ |.+|+|+||++++++ +.+.+...
T Consensus 141 ~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~l~GlRiGy~v~~~~-li~~l~~~ 218 (332)
T PRK06425 141 RDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKIL-GIPSLRIGYIATDDY-NMKISRKI 218 (332)
T ss_pred HHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhc-CCchhhheeeecCHH-HHHHHHHc
Confidence 677888889999999999999733211 112335789999999999 778999999999855 44444432
Q ss_pred HHhcCCCCChhhHHHHhh-cccc-HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 149 QNAEGSGLAPFDCWICLR-GVKT-MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~-~l~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
... ...+.....+... ..+. .+...+...+..+.+.+.|++.. + .. + . ...++++++.
T Consensus 219 ~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~-~~-------------~-~--~~~g~f~~~~ 278 (332)
T PRK06425 219 TEP--WSVCDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNLEAMG-F-RA-------------A-G--DPSANFITFM 278 (332)
T ss_pred CCC--CccCHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHCC-C-EE-------------C-C--CCCceEEEEE
Confidence 211 1122222212111 1111 12223444455555666665431 1 00 0 0 1136778888
Q ss_pred eCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHH
Q 021783 227 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKAL 302 (307)
Q Consensus 227 ~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l 302 (307)
++ +..++.+.+..+||.++.|..|. +.+++++|||++. ++.+++++.|++++
T Consensus 279 ~~---~~~~~~~~l~~~gi~v~~~~~f~---------------------~~~~~~iRis~~~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 279 IP---DAHDFYSYLLKNGILVRLLDDYE---------------------CLGEQYIRIAIRRRSFNIKLVNALRNFL 331 (332)
T ss_pred cC---CHHHHHHHHHHCCeEEEECCCCC---------------------CCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 76 25677777777899998877632 1125789999986 78888888888765
No 114
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=8.5e-26 Score=196.21 Aligned_cols=252 Identities=15% Similarity=0.172 Sum_probs=169.2
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----Ch-HHHHhhcCCCceEEEEeCCCCCcccc
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DL-DEVASAIGPWTKLVWVESPTNPRQQI 76 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~-~~l~~~l~~~~~~v~~~~~~n~tG~~ 76 (307)
++.++...+.+|+ +++.+|+|..+. ..++..|++++.++.+ ++ +++.+.+.++++++++++|+||||.+
T Consensus 84 ~l~~~~~~l~~g~-viv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~k~v~l~~p~NPTG~~ 158 (356)
T PRK08056 84 SIFAVVSGLKPRR-AMIVTPGFAEYR----RALQQVGCEIRRYSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLL 158 (356)
T ss_pred HHHHHHHHhCCCC-EEEeCCCcHHHH----HHHHHcCCeEEEEecccccCCCccHHHHHhccCCCCEEEEeCCcCCCCCC
Confidence 3433333457776 677789997776 5678889999999863 22 35556677889999999999999999
Q ss_pred cc---HHHHHHHHHHcCCEEEEeCccCCCCc------CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH
Q 021783 77 CD---IRKIAEMAHAHGALLLVDNSIMSPVL------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 147 (307)
Q Consensus 77 ~~---~~~l~~~~~~~~~~li~D~a~~~~~~------~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~ 147 (307)
.+ +++|+++|+++++++|+|++|..... +.....+.+++++|+||++ |.+|+|+||++++++.+.+.+..
T Consensus 159 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~v~~~~~~~~~l~~ 237 (356)
T PRK08056 159 PERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFY-AIPGLRLGYLVNSDDAAVARMRR 237 (356)
T ss_pred CCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhc-cCcchhheeeecCCHHHHHHHHH
Confidence 98 78899999999999999999853221 1122346789999999999 77899999999865545444433
Q ss_pred HHHhcCCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 148 LQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
.. .....+...+..+...++. .....+...++.+.+.+.|+..+.+ .++ ...+++++
T Consensus 238 ~~--~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~--------------~~~----~~~~~~~~ 297 (356)
T PRK08056 238 QQ--MPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLL--------------TVW----PGRANYLF 297 (356)
T ss_pred hC--CCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc--------------EEc----CCCCcEEE
Confidence 22 1222333444444444432 2222344455555666666543221 111 11366777
Q ss_pred EEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHh
Q 021783 225 FLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 303 (307)
Q Consensus 225 ~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~ 303 (307)
++++.. ..++.+.|..+||.++.|..|. +..++++||+++. ++.+.+++.|.+.++
T Consensus 298 ~~~~~~--~~~~~~~l~~~gI~v~~~~~f~---------------------~~~~~~iRis~~~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 298 LRCERP--DIDLQRALLTQRILIRSCANYP---------------------GLDSRYYRVAIRSAAENERLLAALRNVLT 354 (356)
T ss_pred EEcCCC--hHHHHHHHHHCCeEEEECCCCC---------------------CCCCCEEEEEEcCHHHHHHHHHHHHHHHc
Confidence 877532 4567777777899998887632 1235689999987 788888888888765
No 115
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.94 E-value=5e-25 Score=194.38 Aligned_cols=257 Identities=16% Similarity=0.177 Sum_probs=171.3
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|+.+. ..+...+..++.++.+ |++++++.+.++++++++++|+||||
T Consensus 105 al~~~~~~~~~~gd~vl~~~p~y~~y~----~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG 180 (402)
T PRK06107 105 AIFLALMATLEAGDEVIIPAPYWVSYP----DMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTG 180 (402)
T ss_pred HHHHHHHHhcCCCCEEEEecCCCcCHH----HHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCC
Confidence 44 344557899999999999998776 3344556777777652 56889998888899999999999999
Q ss_pred cccc---HHHHHHHHHHc-CCEEEEeCccCCCC-----cCC-----ccCCCccEEEeccccccccCCCceeEEEEEcChh
Q 021783 75 QICD---IRKIAEMAHAH-GALLLVDNSIMSPV-----LSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGER 140 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~-~~~li~D~a~~~~~-----~~~-----~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~ 140 (307)
.+++ +++|+++|+++ ++++|+|++|+.-. .+. ....+..++++|+||.+ +.+|+|+||++++++
T Consensus 181 ~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~pGlRiG~~~~~~~- 258 (402)
T PRK06107 181 AVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTY-AMTGWRIGYAAGPAD- 258 (402)
T ss_pred cCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhh-cCcccceeeeecCHH-
Confidence 9996 67888889998 99999999996211 111 11124689999999999 778999999998755
Q ss_pred HHHHHHHHHHhcCCCCChhhHHHHhhccc----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhc
Q 021783 141 LAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 216 (307)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 216 (307)
+.+.+...........+...+..+...++ .++...+.+.++.+.+.+.|++.+++ .+. .+
T Consensus 259 ~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~--------------~~~--~p 322 (402)
T PRK06107 259 LIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGL--------------SCL--VP 322 (402)
T ss_pred HHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCC--------------ccc--CC
Confidence 55556555554444455555555555443 23333444555556666666543211 111 11
Q ss_pred cCCCceEEEEeCCH-----------HHHHHHHh-cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEE
Q 021783 217 KGAGSVLSFLTGSL-----------ALSKHVVE-TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRI 284 (307)
Q Consensus 217 ~~~~~~~~~~~~~~-----------~~~~~~~~-~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRi 284 (307)
..+.++|+.+... .+..++.+ .++.+||.+.+|..|. .++++||
T Consensus 323 -~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg-----------------------~~~~iRi 378 (402)
T PRK06107 323 -DGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYG-----------------------LSPYFRL 378 (402)
T ss_pred -CcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccC-----------------------CCCeEEE
Confidence 1244556555210 12345554 4567899999887642 1457999
Q ss_pred Eecc--CChHHHHHHHHHHHhcC
Q 021783 285 SVGI--EDVNDLISDLDKALRTG 305 (307)
Q Consensus 285 s~~~--~~~~~~i~~l~~~l~~~ 305 (307)
|++. +++++.++.|.+.++++
T Consensus 379 s~~~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 379 SIATSLETLEEACARIERAVAAL 401 (402)
T ss_pred EeCCCHHHHHHHHHHHHHHHHhc
Confidence 9986 56667777777777654
No 116
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.94 E-value=4.7e-25 Score=194.60 Aligned_cols=257 Identities=14% Similarity=0.101 Sum_probs=162.8
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChH----HHHhhcC---CCceEEEEe
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLD----EVASAIG---PWTKLVWVE 67 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~----~l~~~l~---~~~~~v~~~ 67 (307)
|+ .++.++++|||+|++++|+|+.+. ..++..|++++.++.+ |++ .++++++ +++++++++
T Consensus 107 al~~~~~~l~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~ 182 (403)
T PRK08636 107 GYVHLVQAITNPGDVAIVPDPAYPIHS----QAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVN 182 (403)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchH----HHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEe
Confidence 44 455568899999999999999887 6677889999888752 444 3455553 578999999
Q ss_pred CCCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----C---CccCC-CccEEEeccccccccCCCceeEEEE
Q 021783 68 SPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----S---RPLEL-GADIVMHSATKFIAGHSDVMAGVLA 135 (307)
Q Consensus 68 ~~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~---~~~~~-~~d~~~~s~~K~~~g~~g~~~G~~~ 135 (307)
+|+||||.+++ +++|+++|++|++++|+|++|+.... + ..... +..++++||||.+ |.+|+|+||++
T Consensus 183 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~GlRiG~iv 261 (403)
T PRK08636 183 FPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSY-NMAGWRVGFVV 261 (403)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEeccccc-CCccceeeeee
Confidence 99999999997 78899999999999999999973211 1 11111 3557789999999 67899999999
Q ss_pred EcChhHHHHHHHHHHhcCCCCChhhHHHHhhccc----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHH
Q 021783 136 VKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 211 (307)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~ 211 (307)
.+++ +.+.+...........+...+..+...++ .++...+.+.++.+.+.+.|++.. +. .
T Consensus 262 ~~~~-li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---------~~------~ 325 (403)
T PRK08636 262 GNKK-LVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANAG---------WE------L 325 (403)
T ss_pred CCHH-HHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC---------Cc------c
Confidence 8755 44445444433222222222222222221 122223334444455555555421 10 0
Q ss_pred HhhhccCCCceEEEEeCCH---HHHHHHHhc-CCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec
Q 021783 212 HYSQAKGAGSVLSFLTGSL---ALSKHVVET-TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG 287 (307)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~ 287 (307)
. . ...+.++|+++++. .+..++.+. ++..||.+.+|..|.. ..++++||+++
T Consensus 326 ~--~-p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~---------------------~~~~~iRi~~~ 381 (403)
T PRK08636 326 Q--K-PRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGE---------------------YGDEYVRIALI 381 (403)
T ss_pred c--C-CCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCc---------------------CCCCeEEEEec
Confidence 0 1 12466778887532 124566655 4567999998876421 12468999998
Q ss_pred c--CChHHHHHHHHHHHhc
Q 021783 288 I--EDVNDLISDLDKALRT 304 (307)
Q Consensus 288 ~--~~~~~~i~~l~~~l~~ 304 (307)
. +.+++.++.|.++++.
T Consensus 382 ~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 382 ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 4 3444455555555543
No 117
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.94 E-value=1.4e-26 Score=202.49 Aligned_cols=255 Identities=24% Similarity=0.303 Sum_probs=183.4
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
+++||+|++++.+|++...+|..+++..|++++.++.+ |+++++++++++++++++++.+|.+|...|+++|.++
T Consensus 85 ~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~ 164 (371)
T PF00266_consen 85 LKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKL 164 (371)
T ss_dssp GTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHH
T ss_pred cccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhh
Confidence 69999999999999999999999888999999988862 8899999999999999999999999999999999999
Q ss_pred HHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH-----------HHHH---
Q 021783 86 AHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY-----------FLQN--- 150 (307)
Q Consensus 86 ~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~-----------~~~~--- 150 (307)
||++|+++++|++|+.|..+ +..++++|++++|+|| ++||+| .|+++++++...+... ....
T Consensus 165 ~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~K-l~gp~G--~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 241 (371)
T PF00266_consen 165 AHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHK-LGGPPG--LGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGL 241 (371)
T ss_dssp HHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTS-TTSSST--EEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCH
T ss_pred hhccCCceeEechhccccccccccccccceeeecccc-cCCCCc--hhhheehhhhhhccccccccccccccccchhccc
Confidence 99999999999999999987 8888999999999999 779999 8999999765444311 0010
Q ss_pred ------hcCCCCChhhHHHHhhccccH-----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh-hhccC
Q 021783 151 ------AEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY-SQAKG 218 (307)
Q Consensus 151 ------~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~ 218 (307)
..+++.+....+....+++.+ +...++..+..+.+.+.++..+.+ ++.. +....
T Consensus 242 ~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~--------------~~~~~~~~~~ 307 (371)
T PF00266_consen 242 ADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGI--------------EVLGPDDEPR 307 (371)
T ss_dssp HSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTE--------------EESSSSCGGB
T ss_pred ccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCce--------------eEeeeccccc
Confidence 011122222222222333322 222334445555666666655432 1111 11133
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHH
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDL 298 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l 298 (307)
.+++++|.+++.+ ...+.+.|..+||.++.|..+. .|. ....+. ++.+|+|++..+.++.++.|
T Consensus 308 ~~~i~~~~~~~~~-~~~~~~~L~~~~I~~~~G~~~~---~~~-----------~~~~~~-~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 308 RPSIVSFNLPGSD-ADDVVKYLEERGIAVSTGSACA---GPS-----------LDILGM-GGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp GTTEEEEEETTSS-HHHHHHHHHHHTEEEEESTTTC---HHH-----------HHHHHT-TTEEEEE-GTTSSHHHHHHH
T ss_pred ccceEEEeecCCC-HHHHHHHHhhcCEEEeccCccc---HHH-----------HHHhCC-CCEEEEeccCCCCHHHHhhC
Confidence 5789999997665 7888888988899998877632 110 000111 27799999998888888875
No 118
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.94 E-value=7.3e-25 Score=192.66 Aligned_cols=258 Identities=14% Similarity=0.147 Sum_probs=170.4
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcC---CCceEEEEeCCCCC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIG---PWTKLVWVESPTNP 72 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~---~~~~~v~~~~~~n~ 72 (307)
|+ .++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.++ ++++++++++|+||
T Consensus 103 al~~~~~~~~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NP 178 (391)
T PRK07309 103 ALSASLTAILEPGDKVLLPAPAYPGYE----PIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANP 178 (391)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCcchH----HHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCC
Confidence 44 445567899999999999999887 5567789999998863 6788988886 36899999999999
Q ss_pred cccccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----CCcc--CCCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 73 RQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----SRPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 73 tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~~--~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
||.+++ +++|+++|++||+++|+|++|+.... .... ..+..++++|+||.+ |.+|+|+||++++++.+.
T Consensus 179 tG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRvG~~v~~~~~~~ 257 (391)
T PRK07309 179 TGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSH-AMTGWRIGLIFAPAEFTA 257 (391)
T ss_pred CCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhc-cCccceeEEEEeCHHHHH
Confidence 999986 88999999999999999999974322 1111 224679999999999 667999999999866444
Q ss_pred HHHHHHHHhcCCCCChhhHHHHhhccccH----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 143 KELYFLQNAEGSGLAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
.+...........+...+..+...++.. ....+.+.++.+.+.+.|+... + .+ . .+ .
T Consensus 258 -~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~-------~--------~p-~ 318 (391)
T PRK07309 258 -QLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLG-F-KI-------I--------KP-D 318 (391)
T ss_pred -HHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCC-C-ee-------c--------CC-C
Confidence 3433333332233344444444444321 1122333444455555554331 1 00 0 11 1
Q ss_pred CCceEEEEeCCH--HHHHHHHhc-CCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHH
Q 021783 219 AGSVLSFLTGSL--ALSKHVVET-TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVND 293 (307)
Q Consensus 219 ~~~~~~~~~~~~--~~~~~~~~~-l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~ 293 (307)
.+.++++.++.. ....++.+. +...||.+.+|..|.. ..++++||+++. +++++
T Consensus 319 gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRi~~~~~~~~l~~ 377 (391)
T PRK07309 319 GAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGP---------------------YGEGYVRLSYAASMETIKE 377 (391)
T ss_pred eeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCC---------------------CCCCEEEEEecCCHHHHHH
Confidence 234455566432 124556654 4567999988876321 125789999985 56777
Q ss_pred HHHHHHHHHhcC
Q 021783 294 LISDLDKALRTG 305 (307)
Q Consensus 294 ~i~~l~~~l~~~ 305 (307)
.++.|.+++++.
T Consensus 378 ~i~~l~~~~~~~ 389 (391)
T PRK07309 378 AMKRLKEYMEEH 389 (391)
T ss_pred HHHHHHHHHHhh
Confidence 777777777653
No 119
>PRK09082 methionine aminotransferase; Validated
Probab=99.94 E-value=1.3e-25 Score=197.05 Aligned_cols=241 Identities=17% Similarity=0.116 Sum_probs=162.7
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccccc-
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQIC- 77 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~- 77 (307)
.++.+++++||+|++++|+|+++. ..++..|++++.++.+ |++++++.++++++++++++|+||||.++
T Consensus 106 ~~~~~~~~~gd~Vli~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~ 181 (386)
T PRK09082 106 AAILALVRPGDEVIVFDPSYDSYA----PAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWS 181 (386)
T ss_pred HHHHHHcCCCCEEEEeCCCchhhH----HHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCC
Confidence 445567899999999999998887 5566789999999874 77899999988899999999999999986
Q ss_pred --cHHHHHHHHHHcCCEEEEeCccCCCCc-----C---C-ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH
Q 021783 78 --DIRKIAEMAHAHGALLLVDNSIMSPVL-----S---R-PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 146 (307)
Q Consensus 78 --~~~~l~~~~~~~~~~li~D~a~~~~~~-----~---~-~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~ 146 (307)
++++|.++|++||+++|+|++|+...+ . . ....+..++++||||.+ |.+|+|+||++++++ +.+.+.
T Consensus 182 ~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~iv~~~~-l~~~~~ 259 (386)
T PRK09082 182 AADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTY-HVTGWKVGYCVAPAA-LSAEFR 259 (386)
T ss_pred HHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhc-cchhhhhhhhhCCHH-HHHHHH
Confidence 488899999999999999999963221 1 1 11135789999999999 678999999999754 545455
Q ss_pred HHHHhcCCCCChhhHHHHhhccc----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCce
Q 021783 147 FLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 222 (307)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 222 (307)
..........+...+..+...+. .++...+.+.++.+.+.+.|++.. ++-. + ...+.+
T Consensus 260 ~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~--------~-~~g~~~ 321 (386)
T PRK09082 260 KVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSR---------FKLL--------P-CEGTYF 321 (386)
T ss_pred HHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC---------Cccc--------C-CCeeEE
Confidence 44433333334433333333332 222233444555556666665421 1100 1 112445
Q ss_pred EEEEeCC--HHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 223 LSFLTGS--LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 223 ~~~~~~~--~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
++++++. ..+..++.+.+ +.+||.+.+|..|... +.+++++||+++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~-------------------~~~~~~~Ri~~~~ 371 (386)
T PRK09082 322 QLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYAD-------------------PFPHRLVRLCFAK 371 (386)
T ss_pred EEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCC-------------------CCCCCEEEEEecC
Confidence 6667642 12356676654 6779999888754211 1135789999997
No 120
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.7e-26 Score=199.94 Aligned_cols=241 Identities=19% Similarity=0.236 Sum_probs=160.2
Q ss_pred HHHHhcCCC-CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 6 AVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 6 ~~~~~~~~g-d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
++.+++++| |+|+++.|+|+.+. ..++..|++++.++.+ |++++++++ ++++++++++|+||||...+.
T Consensus 90 ~~~~~~~~g~~~vli~~P~y~~y~----~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~ 164 (351)
T PRK01688 90 LIRAFCEPGKDAILYCPPTYGMYS----VSAETIGVEIRTVPTLDNWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINP 164 (351)
T ss_pred HHHHhcCCCCCEEEEcCCCHHHHH----HHHHHcCCEEEEeecCCCCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCH
Confidence 444577887 99999999998776 6678899999999873 678898887 589999999999999999987
Q ss_pred HHHHHHHHHc--CCEEEEeCccCCCCcC-----CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhc
Q 021783 80 RKIAEMAHAH--GALLLVDNSIMSPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 152 (307)
Q Consensus 80 ~~l~~~~~~~--~~~li~D~a~~~~~~~-----~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~ 152 (307)
+++.++++.. ++++|+|++|...... .....+..+++.||||++ |.+|+|+||++++++ +.+.+......
T Consensus 165 ~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~-glaGlRiGy~i~~~~-~i~~l~~~~~~- 241 (351)
T PRK01688 165 QDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAF-ALAGLRCGFTLANEE-VINLLLKVIAP- 241 (351)
T ss_pred HHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhh-cCHHHHHhHHhCCHH-HHHHHHhccCC-
Confidence 7777776543 6899999999643211 122346789999999999 788999999998755 44444433221
Q ss_pred CCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEe
Q 021783 153 GSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 227 (307)
Q Consensus 153 ~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 227 (307)
...+...+..+...++ .+..+.+.+.++.+.+.+.|+..+.+..+ . .+.++++++++
T Consensus 242 -~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~----------------ps~~nfi~~~~ 303 (351)
T PRK01688 242 -YPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQV-F----------------DSETNYILARF 303 (351)
T ss_pred -CCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE-C----------------CCCCcEEEEEc
Confidence 1222222333333332 23334445555556666666544321110 1 12366777777
Q ss_pred CCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHH
Q 021783 228 GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISD 297 (307)
Q Consensus 228 ~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~ 297 (307)
.+ ...+.+.|..+||.++.+..+ .| .++++|||++. ++++++++.
T Consensus 304 ~~---~~~l~~~L~~~gi~vr~~~~~---------------------~~-~~~~iRis~~~~~e~~~l~~a 349 (351)
T PRK01688 304 TA---SSAVFKSLWDQGIILRDQNKQ---------------------PG-LSNCLRITIGTREECQRVIDA 349 (351)
T ss_pred CC---HHHHHHHHHHCCeEEEECCCc---------------------CC-CCCeEEEeCCCHHHHHHHHHh
Confidence 52 567778888889988764431 11 15689999995 444444443
No 121
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=4.5e-26 Score=198.69 Aligned_cols=247 Identities=17% Similarity=0.214 Sum_probs=167.2
Q ss_pred HHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 021783 7 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 7 ~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
+..++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.++++++++++++|+||||.+.+.++
T Consensus 104 ~~~~~~~gd~vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~ 179 (361)
T PRK00950 104 MRTFIDPGDEVIIPTPTFSYYE----ISAKAHGAKPVYAKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEED 179 (361)
T ss_pred HHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEeecCCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHH
Confidence 3446789999999999997665 4567789999988742 688999988888999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCccCCCCc---C-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCC
Q 021783 82 IAEMAHAHGALLLVDNSIMSPVL---S-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 157 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~~~~~~---~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (307)
+.++|+++|+++|+|++|..... . .....+..++++|+||.+ |.+|+|.||++++++ +.+.+...... ...+
T Consensus 180 l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~~~~~~~-~~~~~~~~~~~--~~~~ 255 (361)
T PRK00950 180 IRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVF-GLAGLRIGYGFVPEW-LIDYYMRAKTP--FSLT 255 (361)
T ss_pred HHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhh-cCchhhcchhcCCHH-HHHHHHHhcCC--CCCC
Confidence 99999999999999999963221 1 111234678999999999 678999999998754 44434333322 2233
Q ss_pred hhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHH
Q 021783 158 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVV 237 (307)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (307)
...+..+...++.. ...++..+..+..++.+.+.-.+ . +. ...++++++.+++. ...++.
T Consensus 256 ~~~~~~a~~~l~~~-~~~~~~~~~~~~~r~~l~~~l~~-~-------------~~----~~~~~~i~~~~~~~-~~~~~~ 315 (361)
T PRK00950 256 RLSQAAAIAALSDK-EYIEKSIEHGIKSREYLYNELPF-K-------------VY----PSEANFVLVDVTPM-TAKEFC 315 (361)
T ss_pred HHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHhhcCe-e-------------EC----CCcceEEEEECCCC-CHHHHH
Confidence 44444444444431 12233333333333333221110 0 00 11356788887543 367788
Q ss_pred hcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHH
Q 021783 238 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKAL 302 (307)
Q Consensus 238 ~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l 302 (307)
+.|..+||.+++|..+. +..++++|+|++. ++++++++.|++++
T Consensus 316 ~~l~~~gv~v~~~~~f~---------------------~~~~~~lRis~~~~~~~~~l~~~L~~il 360 (361)
T PRK00950 316 EELLKRGVIVRDCTSFR---------------------GLGDYYIRVSIGTFEENERFLEILKEIV 360 (361)
T ss_pred HHHHHCCEEEeeCCccC---------------------CCCCCeEEEECCCHHHHHHHHHHHHHHh
Confidence 88878899988766421 1135789999985 56677777776654
No 122
>PRK07777 aminotransferase; Validated
Probab=99.94 E-value=4.9e-25 Score=193.70 Aligned_cols=256 Identities=20% Similarity=0.155 Sum_probs=166.3
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC--------ChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--------d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
|+ .++.+++++||+|+++.|.|+.+. ..++..|++++.++.+ |++++++.+.+++++|++++|+|||
T Consensus 97 al~~~~~~~~~~gd~vli~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPt 172 (387)
T PRK07777 97 AIAAAVLGLVEPGDEVLLIEPYYDSYA----AVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPT 172 (387)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCchhhH----HHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCC
Confidence 45 455567899999999999998877 5566778888888752 6789999888889999999999999
Q ss_pred ccccc---HHHHHHHHHHcCCEEEEeCccCCCCc------C--C-ccCCCccEEEeccccccccCCCceeEEEEEcChhH
Q 021783 74 QQICD---IRKIAEMAHAHGALLLVDNSIMSPVL------S--R-PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 74 G~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~------~--~-~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
|.+++ +++|.++|+++++++|+|++|....+ + . ....+.+++++|+||.+ |.+|+|+||++++++ +
T Consensus 173 G~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~~-l 250 (387)
T PRK07777 173 GTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTF-NVTGWKIGWACGPAP-L 250 (387)
T ss_pred CccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhc-cCcCceeEEEecCHH-H
Confidence 99985 88999999999999999999963221 1 1 11245789999999999 667999999998755 4
Q ss_pred HHHHHHHHHhcCCCCChhhHHHHhhcc----ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhcc
Q 021783 142 AKELYFLQNAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 217 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (307)
.+.+...........+...+..+...+ +.++...+.+.++.+.+.+.|++.. +.-. + .
T Consensus 251 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---------~~~~--------~-~ 312 (387)
T PRK07777 251 IAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAG---------FEVH--------D-S 312 (387)
T ss_pred HHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCC---------CCcc--------C-C
Confidence 444444433222222222222222222 1222333445555566666665431 1101 1 1
Q ss_pred CCCceEEEEeCC--HHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChH
Q 021783 218 GAGSVLSFLTGS--LALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVN 292 (307)
Q Consensus 218 ~~~~~~~~~~~~--~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~ 292 (307)
..+.+++++++. .....++.+.|. ..||.+.+|..|... .+..++++||+++. ++++
T Consensus 313 ~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~------------------~~~~~~~~Ri~~~~~~~~l~ 374 (387)
T PRK07777 313 AGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDP------------------ADAWNHLVRFAFCKRDDTLD 374 (387)
T ss_pred CcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCC------------------CcCCCCeEEEEecCCHHHHH
Confidence 124455556532 223677888874 679999998764311 01125689999986 3444
Q ss_pred HHHHHHHH
Q 021783 293 DLISDLDK 300 (307)
Q Consensus 293 ~~i~~l~~ 300 (307)
+.+++|.+
T Consensus 375 ~~l~~l~~ 382 (387)
T PRK07777 375 EAIRRLRA 382 (387)
T ss_pred HHHHHHHH
Confidence 44444444
No 123
>PRK08175 aminotransferase; Validated
Probab=99.94 E-value=4.8e-25 Score=194.13 Aligned_cols=256 Identities=14% Similarity=0.098 Sum_probs=167.8
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcC---CCceEEEEeCCCCCccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIG---PWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~ 77 (307)
.++..+++|||+|++++|+|+.+. ..++..|++++.++.+ +.+++++.++ ++++++++++|+||||.++
T Consensus 106 ~~~~~~~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~ 181 (395)
T PRK08175 106 HLMLATLDHGDTVLVPNPSYPIHI----YGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCV 181 (395)
T ss_pred HHHHHhCCCCCEEEEcCCCCcchH----HHHHHcCCeEEEEecccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCC
Confidence 344567899999999999998877 4446689999988874 4678888775 4789999999999999999
Q ss_pred cH---HHHHHHHHHcCCEEEEeCccCCCCc-----CCc---c-CCCccEEEeccccccccCCCceeEEEEEcChhHHHHH
Q 021783 78 DI---RKIAEMAHAHGALLLVDNSIMSPVL-----SRP---L-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 145 (307)
Q Consensus 78 ~~---~~l~~~~~~~~~~li~D~a~~~~~~-----~~~---~-~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~ 145 (307)
+. ++|+++|++||+++|+|++|+.... ... . ..+..++++|+||.+ |.+|+|+||++.+++ +.+.+
T Consensus 182 ~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~pGlRiG~~~~~~~-l~~~~ 259 (395)
T PRK08175 182 ELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSY-NMAGWRIGFMVGNPE-LVSAL 259 (395)
T ss_pred CHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccc-cCcchhheeeeCCHH-HHHHH
Confidence 85 7999999999999999999963221 111 1 124568899999999 678999999998754 55555
Q ss_pred HHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 146 YFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
...........+...+..+...+.. ++...+.+.++.+.+.+.|+... + . .. . ...+.
T Consensus 260 ~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~--------~------~~--~-p~~g~ 321 (395)
T PRK08175 260 ARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAG-W--------M------VE--M-PKASM 321 (395)
T ss_pred HHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcC-C--------c------cc--C-CCEEE
Confidence 5544433322223233333333322 22223334445555556565431 1 0 00 1 12467
Q ss_pred eEEEEeCCHH---HHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHH
Q 021783 222 VLSFLTGSLA---LSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLI 295 (307)
Q Consensus 222 ~~~~~~~~~~---~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i 295 (307)
++++.+++.. ...++.+.+ ++.||.+.+|..|.. ..++++||+++. +.+.+.+
T Consensus 322 ~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~---------------------~~~~~lRis~~~~~~~~~~al 380 (395)
T PRK08175 322 YVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGD---------------------YGDTHVRFALIENRDRIRQAI 380 (395)
T ss_pred EEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCc---------------------CCCCeEEEEeCCCHHHHHHHH
Confidence 8888875431 256676654 568999988876421 124679999974 4455556
Q ss_pred HHHHHHHhcC
Q 021783 296 SDLDKALRTG 305 (307)
Q Consensus 296 ~~l~~~l~~~ 305 (307)
+.|.+.+++.
T Consensus 381 ~~l~~~l~~~ 390 (395)
T PRK08175 381 RGIKAMFRAD 390 (395)
T ss_pred HHHHHHHHhc
Confidence 6666666543
No 124
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.94 E-value=8.7e-25 Score=192.36 Aligned_cols=254 Identities=19% Similarity=0.187 Sum_probs=171.9
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~ 75 (307)
++ .++.+++++||+|++++|+|..+. ..++..|++++.++.+ |++++++.++++++++++++|+||||.
T Consensus 108 al~~~~~~l~~~gd~Vli~~p~~~~~~----~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~ 183 (394)
T PRK06836 108 ALNVALKAILNPGDEVIVFAPYFVEYR----FYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNNPTGV 183 (394)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCccHH----HHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCCCCCc
Confidence 44 344557899999999999998877 5567889999999863 689999999889999999999999999
Q ss_pred ccc---HHHHHHHHHH------cCCEEEEeCccCCCCc-----CC-ccCCCccEEEeccccccccCCCceeEEEEEcChh
Q 021783 76 ICD---IRKIAEMAHA------HGALLLVDNSIMSPVL-----SR-PLELGADIVMHSATKFIAGHSDVMAGVLAVKGER 140 (307)
Q Consensus 76 ~~~---~~~l~~~~~~------~~~~li~D~a~~~~~~-----~~-~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~ 140 (307)
+++ +++|+++|++ ||+++|+|++|..-.. +. ....+.+++++|+||.+ +.+|+|+||++++++.
T Consensus 184 ~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~pGlRiG~~~~~~~~ 262 (394)
T PRK06836 184 VYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSL-SLPGERIGYIAVNPEM 262 (394)
T ss_pred CCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhc-cCcceeeEEEecCHHH
Confidence 987 7788888998 8999999999973221 11 12345789999999999 6679999999997543
Q ss_pred HHHH---H---HHHHHhcC-CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 141 LAKE---L---YFLQNAEG-SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 141 ~~~~---~---~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
.+. . .......+ ...+...+......++.- ...+.+.++.+.+.+.|++.. + ...
T Consensus 263 -~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~r~~l~~~L~~~g-~-~~~-------------- 324 (394)
T PRK06836 263 -EDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT-VDVSIYKRNRDLLYDGLTELG-F-ECV-------------- 324 (394)
T ss_pred -hhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHhCC-C-Eee--------------
Confidence 221 1 11112111 123333444444444331 223445556666666666431 1 100
Q ss_pred hhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CCh
Q 021783 214 SQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDV 291 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~ 291 (307)
. ...+.++++.++.. +..++.+.+..+||.+..|..|. .++++||+++. +.+
T Consensus 325 -~-~~gg~~~~~~~~~~-~~~~~~~~l~~~gv~v~~g~~f~-----------------------~~~~iRi~~~~~~~~~ 378 (394)
T PRK06836 325 -K-PQGAFYLFPKSPEE-DDVAFCEKAKKHNLLLVPGSGFG-----------------------CPGYFRLSYCVDTETI 378 (394)
T ss_pred -c-CCceEEEEEeCCCC-CHHHHHHHHHhCCEEEECchhcC-----------------------CCCeEEEEecCCHHHH
Confidence 1 11244566666543 36677788888899998887532 13579999985 455
Q ss_pred HHHHHHHHHHHhcC
Q 021783 292 NDLISDLDKALRTG 305 (307)
Q Consensus 292 ~~~i~~l~~~l~~~ 305 (307)
++.++.|.++++++
T Consensus 379 ~~~i~~l~~~l~~~ 392 (394)
T PRK06836 379 ERSLPAFEKLAKEY 392 (394)
T ss_pred HHHHHHHHHHHHHh
Confidence 56667777777654
No 125
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.94 E-value=3.3e-25 Score=190.35 Aligned_cols=235 Identities=19% Similarity=0.180 Sum_probs=157.4
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMA 86 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---~~~l~~~~ 86 (307)
.+.+||+|++++|+|+.+. ..++..|++++.+|.+ ++++.++ +++++++++|+||||.+++ +++|+++|
T Consensus 82 ~~~~gd~v~v~~P~y~~~~----~~~~~~g~~~~~v~~~---~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~ 153 (330)
T PRK05664 82 RLRAPGRVGVLSPCYAEHA----HAWRRAGHQVRELDEA---EVEAALD-SLDVLVVVNPNNPTGRRFDPARLLAWHARL 153 (330)
T ss_pred HccCCCEEEEcCCChHHHH----HHHHHcCCeEEEechh---hHhhhhc-CCCEEEEeCCcCCCCCccCHHHHHHHHHHH
Confidence 4689999999999998888 7778899999999864 4445553 6788999999999999997 56666777
Q ss_pred HHcCCEEEEeCccCCCCc----CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHH
Q 021783 87 HAHGALLLVDNSIMSPVL----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCW 162 (307)
Q Consensus 87 ~~~~~~li~D~a~~~~~~----~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (307)
+++|+++|+|++|..... ......+..++++||||.+ |.+|+|+||++++++ +.+.+...... ...+...+.
T Consensus 154 ~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~-gl~GlRiG~~v~~~~-l~~~~~~~~~~--~~~~~~~~~ 229 (330)
T PRK05664 154 AARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFF-GLAGARLGFVLAEPA-LLRALAELLGP--WTVSGPTRW 229 (330)
T ss_pred HhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccc-cCCCcceEEEEeCHH-HHHHHHHhcCC--CCCCHHHHH
Confidence 899999999999964321 1222334679999999999 678999999999754 44444443321 123344444
Q ss_pred HHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhc
Q 021783 163 ICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVET 239 (307)
Q Consensus 163 ~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (307)
.+...+.. .+...+...++.+.+.+.+++.. +. +..+...++++.++ +..++.+.
T Consensus 230 ~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~---------~~----------~~~~~~~f~~~~~~---~~~~~~~~ 287 (330)
T PRK05664 230 LAQAALADTPWQRRQRERLLAASQRLAALLRRHG---------LT----------PAGGCALFQWVRTE---DAAALHEF 287 (330)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCC---------Cc----------ccCCcceEEEEecC---CHHHHHHH
Confidence 44444432 22233444455556666665431 10 11112345566554 35677788
Q ss_pred CCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 021783 240 TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 304 (307)
Q Consensus 240 l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 304 (307)
+..+||.++. |. .++++|||++. ++.+++.+.|++..++
T Consensus 288 l~~~gi~v~~---f~-----------------------~~~~iRis~~~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 288 LARRGILTRL---FE-----------------------QPASLRFGLPADEADWARLDQALLAYRKE 328 (330)
T ss_pred HHHCCeEEEE---CC-----------------------CCCeEEEECCCCHHHHHHHHHHHHHHHhh
Confidence 8888998852 11 13579999994 5677777777666543
No 126
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.4e-25 Score=194.54 Aligned_cols=246 Identities=16% Similarity=0.158 Sum_probs=164.8
Q ss_pred HHHHhcCCCC-eEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcC----CCceEEEEeCCCCCcc
Q 021783 6 AVTHLLGTGE-EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIG----PWTKLVWVESPTNPRQ 74 (307)
Q Consensus 6 ~~~~~~~~gd-~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~----~~~~~v~~~~~~n~tG 74 (307)
++.+++.+|| +|++++|+|+.+. ..++..|++++.++.+ |++++++++. ++++++++++|+||||
T Consensus 107 ~~~~~~~~g~~~Vlv~~P~y~~~~----~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG 182 (374)
T PRK02610 107 LLIATCLGGEGSILVAEPTFSMYG----ILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTG 182 (374)
T ss_pred HHHHHcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCC
Confidence 3455667786 8999999998887 6678899999999853 6788988876 4899999999999999
Q ss_pred ccccHHHHHHHHHH-cCCEEEEeCccCCCCc----CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 75 QICDIRKIAEMAHA-HGALLLVDNSIMSPVL----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 75 ~~~~~~~l~~~~~~-~~~~li~D~a~~~~~~----~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
.+++.+++.++++- +|+++|+|++|..... .........++++||||.+ |.+|+|+||++++++ +.+.+....
T Consensus 183 ~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~-g~~GlRiG~~v~~~~-l~~~l~~~~ 260 (374)
T PRK02610 183 NPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAF-RLAAHRVGYAIGHPE-LIAVLEKVR 260 (374)
T ss_pred CCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhc-cCcccceeeeecCHH-HHHHHHHhc
Confidence 99987666665532 4899999999973221 1122234568899999999 678999999998654 544444433
Q ss_pred HhcCCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 150 NAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
. ....+...+.++...++.. ....+...+..+.+.+.|++.+ ++... ...+.+++++
T Consensus 261 ~--~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~--------------~~~~~----p~~g~f~~~~ 320 (374)
T PRK02610 261 L--PYNLPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELP--------------QLRVW----PSAANFLYLR 320 (374)
T ss_pred C--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CcEeC----CCcceEEEEe
Confidence 2 1223444455555555432 2222233333333444444322 11111 1246778888
Q ss_pred eCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhcC
Q 021783 227 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRTG 305 (307)
Q Consensus 227 ~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~~ 305 (307)
++......++.+.+..+||.++.+ ++++|||++. +++++.++.|.++++++
T Consensus 321 l~~~~~~~~~~~~l~~~gi~v~~~----------------------------~~~lRls~~~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 321 LSQDAALAALHQALKAQGTLVRHT----------------------------GGGLRITIGTPEENQRTLERLQAALTQL 372 (374)
T ss_pred CCCCCCHHHHHHHHHHCCEEEEeC----------------------------CCeEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 764334677778888888877531 3469999986 56788888888888765
No 127
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=9.2e-25 Score=189.42 Aligned_cols=249 Identities=15% Similarity=0.193 Sum_probs=170.8
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCccc
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG~ 75 (307)
++..+...+.+ ++|++++|+|+.+. ..++..|++++.++.+ | +++.+.+.++++++++++|+||||.
T Consensus 83 ~l~~~~~~~~~-~~v~i~~P~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~ 156 (354)
T PRK06358 83 LIFNIVKVTKP-KKVLILAPTFAEYE----RALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQ 156 (354)
T ss_pred HHHHHHHHhCC-CcEEEecCChHHHH----HHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCC
Confidence 34333333444 68999999998777 5567889999998763 3 4555556667999999999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCccCCCCcC--------CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHH
Q 021783 76 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLS--------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 144 (307)
Q Consensus 76 ~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~--------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~ 144 (307)
+++ +++|+++|++||+++|+|++|...... .....+..++++||||.+ |.+|+|+||++++++.+.+.
T Consensus 157 ~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-gl~G~RiG~lv~~~~~~~~~ 235 (354)
T PRK06358 157 LISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFF-AIPGLRLGYGLTSNKNLAEK 235 (354)
T ss_pred ccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhc-cCcchhheeeecCCHHHHHH
Confidence 996 888889999999999999999632211 122335789999999999 77899999999876555554
Q ss_pred HHHHHHhcCCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 145 LYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
+..... ....+...+......++. +....+...++.+.+.+.|+..+++ . +. ++ .++
T Consensus 236 ~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~-------------~~--~~--~g~ 295 (354)
T PRK06358 236 LLQMRE--PWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGI-K-------------VY--KP--SVN 295 (354)
T ss_pred HHHhCC--CCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCc-E-------------Ec--CC--cce
Confidence 544332 223344455555555532 2333444555566666666543221 1 11 11 356
Q ss_pred eEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHH
Q 021783 222 VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDK 300 (307)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~ 300 (307)
++++++++. .++.+.+.++||.+..|..|. +.+++++||+++. ++.+++++.|.+
T Consensus 296 f~~~~~~~~---~~~~~~l~~~gI~v~~~~~f~---------------------~~~~~~iRls~~~~~~~~~l~~~l~~ 351 (354)
T PRK06358 296 FIFFKLEKP---IDLRKELLKKGILIRSCSNYR---------------------GLDENYYRVAVKSREDNKKLLKALEV 351 (354)
T ss_pred EEEEEcCch---HHHHHHHHHCCeEEEECCCCC---------------------CCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 788888642 567777777899999887632 1135789999986 888999988877
Q ss_pred HH
Q 021783 301 AL 302 (307)
Q Consensus 301 ~l 302 (307)
.+
T Consensus 352 ~~ 353 (354)
T PRK06358 352 IL 353 (354)
T ss_pred Hh
Confidence 65
No 128
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=8.1e-26 Score=196.44 Aligned_cols=241 Identities=19% Similarity=0.251 Sum_probs=168.6
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
.++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |+++++++++++++++++++|+||||.+++.+
T Consensus 96 ~~~~~l~~~gd~vlv~~P~y~~~~----~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~ 171 (366)
T PRK01533 96 IISRAVLKAGDNIVTAGATFPQYR----HHAIIEGCEVKEVALNNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDR 171 (366)
T ss_pred HHHHHhcCCCCEEEEcCCcHHHHH----HHHHHcCCEEEEeecCCCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHH
Confidence 344567899999999999998887 5677889999999874 78999999988899999999999999999866
Q ss_pred HHHHHH---HHcCCEEEEeCccCCCCc--------CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 81 KIAEMA---HAHGALLLVDNSIMSPVL--------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 81 ~l~~~~---~~~~~~li~D~a~~~~~~--------~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
++.+++ ++++ ++|+|++|..... ......+..++++||||.+ |.+|+|+||++++++ +.+.+....
T Consensus 172 ~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~l~GlRiG~~i~~~~-~~~~l~~~~ 248 (366)
T PRK01533 172 KLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAY-GLASFRVGYAVGHEE-LIEKLNVVR 248 (366)
T ss_pred HHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHh-cChHHHHhHHhCCHH-HHHHHHHhc
Confidence 655555 4445 6778999852111 1122345789999999999 778999999998744 545454433
Q ss_pred HhcCCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 150 NAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
. ....+...+.++...++.- ....+...++.+.+.+.++... +. +. ...+++++++
T Consensus 249 ~--~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~g---------~~------~~----~~~~nf~~~~ 307 (366)
T PRK01533 249 L--PFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKENE---------IP------FY----QSQTNFIFLP 307 (366)
T ss_pred C--CCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC---------Cc------cC----CCcCcEEEEe
Confidence 2 2345556666666666431 1222333344444444444321 11 11 2247788888
Q ss_pred eCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhc
Q 021783 227 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRT 304 (307)
Q Consensus 227 ~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~ 304 (307)
+.+ ..++.+.|..+||.++. . ++++|||++. ++.+++++.|++.++.
T Consensus 308 ~~~---~~~~~~~l~~~GI~Vr~--~--------------------------~~~iRis~~~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 308 VEN---GGEIYEACAHAGFIIRP--F--------------------------PNGVRITVGTREQNEGVISVLQQHFEN 355 (366)
T ss_pred CCC---HHHHHHHHHHCCcEEcc--C--------------------------CCceEEeCCCHHHHHHHHHHHHHHHHh
Confidence 752 45678888889998875 1 2359999986 8999999999888753
No 129
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.94 E-value=2.1e-25 Score=194.09 Aligned_cols=257 Identities=18% Similarity=0.153 Sum_probs=169.7
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC-CceEEEEeCCCCCcccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP-WTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~ 78 (307)
.++.+++++||+|++++++|++.. +...++..|++++.+|.+ |++++++.+++ +++++++++++||+|.+.|
T Consensus 65 ~~~~~~~~~g~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~ 142 (356)
T cd06451 65 AALSNLLEPGDKVLVGVNGVFGDR--WADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP 142 (356)
T ss_pred HHHHHhCCCCCEEEEecCCchhHH--HHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC
Confidence 344567899999999998886632 225567789999998753 78999999986 8999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH---H------
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF---L------ 148 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~---~------ 148 (307)
+++|.++|+++|+++++|++|+.|..+ +...++.|++++|+||++++|.| +|+++.+++.... +.. .
T Consensus 143 ~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g--~G~l~~~~~~~~~-~~~~~~~~~~~~~ 219 (356)
T cd06451 143 LEGIGALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPG--LGPIAFSERALER-IKKKTKPKGFYFD 219 (356)
T ss_pred HHHHHHHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhccCCCC--cceeEECHHHHHH-HHhcCCCCceeec
Confidence 999999999999999999999887654 55567899999999999988877 8999998664433 221 0
Q ss_pred ----HH------hcCCCCChhhHHHHhhccccH-----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 149 ----QN------AEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 149 ----~~------~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
.. ...++.+....+.+..+++.+ ....++..++++.+.+.|+.. .+ .+ ..
T Consensus 220 ~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~-------------~~ 284 (356)
T cd06451 220 LLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GL-KL-------------LA 284 (356)
T ss_pred HHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CC-ee-------------cc
Confidence 00 011122222222223333322 223344445555566666543 11 11 00
Q ss_pred hhccCCCceEEEEeCCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChH
Q 021783 214 SQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVN 292 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~ 292 (307)
++....+.++++.+++......+.+.|..+ ||.++.|.... .++++|+|++..+.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~-----------------------~~~~iRis~~~~~~~ 341 (356)
T cd06451 285 KPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPT-----------------------AGKVFRIGHMGEATR 341 (356)
T ss_pred CcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEecccccc-----------------------cCCEEEEecCCCCCH
Confidence 010112233445554333467888888887 99887765311 134799999865555
Q ss_pred HHHHHHHHHHhc
Q 021783 293 DLISDLDKALRT 304 (307)
Q Consensus 293 ~~i~~l~~~l~~ 304 (307)
+.++++.++|++
T Consensus 342 e~v~~~~~~l~~ 353 (356)
T cd06451 342 EDVLGVLSALEE 353 (356)
T ss_pred HHHHHHHHHHHH
Confidence 566666555543
No 130
>PRK09148 aminotransferase; Validated
Probab=99.94 E-value=1.9e-24 Score=190.63 Aligned_cols=250 Identities=14% Similarity=0.069 Sum_probs=161.1
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhc---CCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAI---GPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l---~~~~~~v~~~~~~n~tG 74 (307)
++ .++..++++||+|++++|+|+.+. ..++..|++++.++.+ +++++++.+ .++++++++++|+||||
T Consensus 104 al~~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG 179 (405)
T PRK09148 104 GFANMAQAITAPGDVILCPNPSYPIHA----FGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTA 179 (405)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcccH----HHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCC
Confidence 44 344557899999999999999887 4456789999999863 334444444 36889999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----CCcc----CCCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----SRPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~~----~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
.+++ +++|.++|++||+++|+|++|....+ +... ..+..++++||||.+ |.+|+|+||++++++ +.
T Consensus 180 ~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~-~~pGlR~G~~v~~~~-~i 257 (405)
T PRK09148 180 YVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTF-SMAGWRMGFAVGNER-LI 257 (405)
T ss_pred cCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEecccccc-CCcchheeeeeCCHH-HH
Confidence 9998 57889999999999999999973211 1111 123567899999999 678999999998754 55
Q ss_pred HHHHHHHHhcCCCCChhhHHHHhhccc----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 143 KELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+.+...........+...+..+...++ .++...+.+.++...+.+.|++.. +.-. . ..
T Consensus 258 ~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~---------~~~~--------~-p~ 319 (405)
T PRK09148 258 AALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAG---------WDIP--------P-PA 319 (405)
T ss_pred HHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcC---------CccC--------C-CC
Confidence 555555543333333334444333332 223333444555555666665431 1000 1 12
Q ss_pred CCceEEEEeCCH---HHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHH
Q 021783 219 AGSVLSFLTGSL---ALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDL 294 (307)
Q Consensus 219 ~~~~~~~~~~~~---~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~ 294 (307)
.+.++++.+++. ....++.+.+ ++.||.+.+|..|.. ..++++||+++. +.+++
T Consensus 320 ~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~---------------------~~~~~~Ri~~~~-~~~~l 377 (405)
T PRK09148 320 ASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGE---------------------HGDGYVRIALVE-NEQRI 377 (405)
T ss_pred eeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCC---------------------CCCCeEEEEecC-CHHHH
Confidence 355777777532 1245565554 468999999876421 024689999983 44444
Q ss_pred HHHH
Q 021783 295 ISDL 298 (307)
Q Consensus 295 i~~l 298 (307)
.+.+
T Consensus 378 ~~al 381 (405)
T PRK09148 378 RQAA 381 (405)
T ss_pred HHHH
Confidence 4333
No 131
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.94 E-value=5.4e-25 Score=193.03 Aligned_cols=255 Identities=18% Similarity=0.153 Sum_probs=171.4
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-------CChHHHHhhcC-------CCceEEEEeCCC
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIG-------PWTKLVWVESPT 70 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~-------~~~~~v~~~~~~ 70 (307)
.++.+++++||+|+++.++|.+.. ..++..|++++.++. .|++++++.++ +++++|++++++
T Consensus 93 ~al~~l~~~gd~Vlv~~~~h~s~~----~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~ 168 (387)
T PRK09331 93 AVMHSLCKKGDYVVLDGLAHYTSY----VAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVD 168 (387)
T ss_pred HHHHHhcCCCCEEEECCCchHHHH----HHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCC
Confidence 566677899999999999998887 346778999999987 37899998885 368999999999
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 71 NPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 71 n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
|++|.+.|+++|.++|+++|+++++|++|+.|..+ +...+|+|++++|+||++++++| +|+++++++.+........
T Consensus 169 ~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~~--~G~l~~~~~~i~~~~~~~~ 246 (387)
T PRK09331 169 GNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASAP--SGVLATTEEYADKVFRTSR 246 (387)
T ss_pred CCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCCC--EEEEEECHHHHhhcccccC
Confidence 99999999999999999999999999999998866 66778999999999999987666 9999998654443222110
Q ss_pred H-------hcCCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 150 N-------AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 150 ~-------~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
. ..+++...........+++.+ ..++++..++++.+.+.+++.+++. +..+. ...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~-~~~~~--------------~~~ 311 (387)
T PRK09331 247 KFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIEGFK-QLGEK--------------PRN 311 (387)
T ss_pred CCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE-EeccC--------------cCc
Confidence 0 012122222223223333322 2344556677777777777665431 11110 012
Q ss_pred CceEEEEeCCHH--------HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe-c--c
Q 021783 220 GSVLSFLTGSLA--------LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-G--I 288 (307)
Q Consensus 220 ~~~~~~~~~~~~--------~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~--~ 288 (307)
.+++.+..+... ....+.+.|.++||...... ....+|+.. + .
T Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~--------------------------~~~i~ri~~~g~t~ 365 (387)
T PRK09331 312 HDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKPG--------------------------ATKEFKLSTYGLTW 365 (387)
T ss_pred CCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEccC--------------------------CceEEEEEeccCCH
Confidence 344445433221 12457777877888622111 122356655 3 3
Q ss_pred CChHHHHHHHHHHHhcCC
Q 021783 289 EDVNDLISDLDKALRTGP 306 (307)
Q Consensus 289 ~~~~~~i~~l~~~l~~~~ 306 (307)
++++++++.|++.+++.+
T Consensus 366 ~di~~l~~aL~~i~~~~~ 383 (387)
T PRK09331 366 EQVEYVADAFKEIAEKYG 383 (387)
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 678888888887776543
No 132
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.94 E-value=2.1e-24 Score=191.50 Aligned_cols=257 Identities=14% Similarity=0.134 Sum_probs=168.8
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcC------CCceEEEEeC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG------PWTKLVWVES 68 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~------~~~~~v~~~~ 68 (307)
|+ .++.+++.|||.|+++.|.|+.+...+ ....|++++.++.+ |++++++++. .++|++++++
T Consensus 132 al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~---~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~n 208 (447)
T PLN02607 132 ANELLTFILADPGDALLVPTPYYPGFDRDL---RWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITN 208 (447)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHH---HhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeC
Confidence 44 344557899999999999998887322 12578898888763 6788888775 3789999999
Q ss_pred CCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----Ccc---------C-CCccEEEeccccccccCCCce
Q 021783 69 PTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPL---------E-LGADIVMHSATKFIAGHSDVM 130 (307)
Q Consensus 69 ~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~~---------~-~~~d~~~~s~~K~~~g~~g~~ 130 (307)
|+||||.+++ +++|+++|++||+++|+|++|+...+. ... . .+..+++.|+||.| |.+|+|
T Consensus 209 P~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~f-g~~GlR 287 (447)
T PLN02607 209 PSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDL-GLPGFR 287 (447)
T ss_pred CCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcC-CCCcce
Confidence 9999999997 789999999999999999999743221 110 1 24568999999999 678999
Q ss_pred eEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhcccc-------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCC
Q 021783 131 AGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL 203 (307)
Q Consensus 131 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l 203 (307)
+|+++..++.+........... ..+...+.++...+.. +....+++.+..+.+.+.|++.. + +-
T Consensus 288 vG~ivs~n~~l~~~~~~~~~~~--~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~g-i-----~~- 358 (447)
T PLN02607 288 VGTIYSYNDKVVTTARRMSSFT--LVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAG-I-----EC- 358 (447)
T ss_pred EEEEEEcCHHHHHHHHHHhhcC--CCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-C-----Cc-
Confidence 9999996665655444433222 2233344444444332 12223344445555556665431 1 00
Q ss_pred CCCCchHHHhhhccCCCceEEEEeCCH------HHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcC
Q 021783 204 PEHPGHELHYSQAKGAGSVLSFLTGSL------ALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 276 (307)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~ 276 (307)
. . ...+.++|+.++.. +...++.+.+ +..||.+.+|..|..
T Consensus 359 --~--------~-~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~--------------------- 406 (447)
T PLN02607 359 --L--------K-GNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHC--------------------- 406 (447)
T ss_pred --c--------c-CCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCC---------------------
Confidence 0 1 12356777776421 2234555454 457999999876321
Q ss_pred CCCCeEEEEecc---CChHHHHHHHHHHHhc
Q 021783 277 LTEDLVRISVGI---EDVNDLISDLDKALRT 304 (307)
Q Consensus 277 ~~~~~iRis~~~---~~~~~~i~~l~~~l~~ 304 (307)
..++|+||+++. +++++.+++|.+++++
T Consensus 407 ~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 407 SEPGWFRVCFANMSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred CCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Confidence 136899999995 5666777777777653
No 133
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.94 E-value=1.7e-24 Score=194.10 Aligned_cols=255 Identities=13% Similarity=0.106 Sum_probs=164.1
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcc-cCCcEEEEecCC-------ChHHHHhhc------CCCceEEEEe
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTC-------DLDEVASAI------GPWTKLVWVE 67 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~-------d~~~l~~~l------~~~~~~v~~~ 67 (307)
|+ .++.++++|||.|++++|.|+.+. ..++ ..|++++.++++ |++++++++ ..++++++++
T Consensus 131 al~~l~~~l~~pGD~Vlv~~P~Y~~~~----~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~ 206 (496)
T PLN02376 131 ANETIMFCLADPGDVFLIPSPYYAAFD----RDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILT 206 (496)
T ss_pred HHHHHHHHhCCCCCEEEECCCCccchH----HHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEc
Confidence 45 455668899999999999999887 3344 579999999872 567776543 2478999999
Q ss_pred CCCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----C---c-cCC-------CccEEEeccccccccCCC
Q 021783 68 SPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----R---P-LEL-------GADIVMHSATKFIAGHSD 128 (307)
Q Consensus 68 ~~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~---~-~~~-------~~d~~~~s~~K~~~g~~g 128 (307)
+|+||||.+++ +++|+++|++||+++|+|++|+...+. . . ... +..+++.||||.+ |.+|
T Consensus 207 nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~-glpG 285 (496)
T PLN02376 207 NPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDM-GLPG 285 (496)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccC-CCCc
Confidence 99999999997 778899999999999999999743211 1 1 000 1345689999999 7789
Q ss_pred ceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhcccc--H-HHH----HHHHHHHHHHHHHHHhcCCCccEEecC
Q 021783 129 VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT--M-ALR----VEKQQDNAQKIAEFLASHPRVKKVNYA 201 (307)
Q Consensus 129 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~-~~~----~~~~~~~~~~l~~~l~~~~~~~~~~~~ 201 (307)
+|+||++.+++.+.+......... ..+...+.++...++. + +.. .+.+.+..+.+.+.|++.
T Consensus 286 lRvG~li~~~~~l~~~~~~~~~~~--~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~--------- 354 (496)
T PLN02376 286 FRVGIVYSFNDSVVSCARKMSSFG--LVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA--------- 354 (496)
T ss_pred ceEEEEEECCHHHHHHHHHHhhcC--CCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC---------
Confidence 999999997676666554443222 2344455554444432 1 111 222233333444444432
Q ss_pred CCCCCCchHHHhhhccCCCceEEEEeCCH-------HHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHH
Q 021783 202 GLPEHPGHELHYSQAKGAGSVLSFLTGSL-------ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 273 (307)
Q Consensus 202 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~ 273 (307)
++.-. . ...|.++|+.++.. +...++.+.+. ..||.+++|..|..
T Consensus 355 gi~~~--------~-~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~------------------ 407 (496)
T PLN02376 355 DIACL--------T-SNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRC------------------ 407 (496)
T ss_pred CCccc--------C-CCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCC------------------
Confidence 11100 1 12356777777421 12245555554 46999999887431
Q ss_pred hcCCCCCeEEEEecc---CChHHHHHHHHHHHh
Q 021783 274 ARGLTEDLVRISVGI---EDVNDLISDLDKALR 303 (307)
Q Consensus 274 ~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~ 303 (307)
..++++||+++. +.++..+++|.+++.
T Consensus 408 ---~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 408 ---TEPGWFRICFANMDDDTLHVALGRIQDFVS 437 (496)
T ss_pred ---CCCCEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 125789999985 455566666666664
No 134
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.94 E-value=5.6e-24 Score=175.38 Aligned_cols=259 Identities=19% Similarity=0.225 Sum_probs=183.7
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC--------ChHHHHhhcC-CCceEEEEeCCCCC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAIG-PWTKLVWVESPTNP 72 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--------d~~~l~~~l~-~~~~~v~~~~~~n~ 72 (307)
++ .++..+.+|||.|++..|.|++.. ...+..|-++...|+. |+++|++.+. .+++++++|+||||
T Consensus 95 gi~~~I~~~T~~gd~Vvi~tPvY~PF~----~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP 170 (388)
T COG1168 95 GISLAIRALTKPGDGVVIQTPVYPPFY----NAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNP 170 (388)
T ss_pred hHHHHHHHhCcCCCeeEecCCCchHHH----HHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCC
Confidence 55 466678999999999999999998 7788999999999873 9999999987 56799999999999
Q ss_pred cccccc---HHHHHHHHHHcCCEEEEeCccCC----C--CcC----CccCCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 73 RQQICD---IRKIAEMAHAHGALLLVDNSIMS----P--VLS----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 73 tG~~~~---~~~l~~~~~~~~~~li~D~a~~~----~--~~~----~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
+|.+.. +.+|.++|.+||+.||.|+.|+. | +.+ +....+..+.+.|.||+| ..+|+.++++++.++
T Consensus 171 ~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtF-NlaGL~~a~~Ii~n~ 249 (388)
T COG1168 171 TGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTF-NLAGLKCAYIIISNR 249 (388)
T ss_pred CCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccc-cchhhhheeEEecCH
Confidence 999985 88999999999999999999972 2 222 122235679999999999 578999999999988
Q ss_pred hHHHHH-HHHHHhcCCCCChhhHHHHhhcc----ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhh
Q 021783 140 RLAKEL-YFLQNAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 140 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 214 (307)
.+.... ..+.......++.+......++. .-+....+.+..|.+.+.+.+.++- |.+++..+
T Consensus 250 ~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~-------------P~v~v~~p 316 (388)
T COG1168 250 ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHL-------------PGVKVTEP 316 (388)
T ss_pred HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhC-------------CCcEEecC
Confidence 775443 44444444444443333333332 3344455666777777777777551 22222211
Q ss_pred hccCCCceEEEEeCCH----HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--
Q 021783 215 QAKGAGSVLSFLTGSL----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-- 288 (307)
Q Consensus 215 ~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-- 288 (307)
+ ...+.|+.+... +..++++ +.+.++.++.|..|.. .+++++|++++.
T Consensus 317 ~---gTYL~WLD~r~l~l~d~~l~~~l--l~~akVal~~G~~FG~---------------------~g~gf~RlN~acpr 370 (388)
T COG1168 317 Q---GTYLAWLDCRELGLDDSELAEFL--LEEAKVALSPGSTFGE---------------------EGSGFVRLNFACPR 370 (388)
T ss_pred C---CceeeeeeccccCCChHHHHHHH--HHhhcEeccCCCccCc---------------------CCCceEEEecCCCH
Confidence 1 356777766321 1233333 3344688888887432 247899999975
Q ss_pred CChHHHHHHHHHHHhcC
Q 021783 289 EDVNDLISDLDKALRTG 305 (307)
Q Consensus 289 ~~~~~~i~~l~~~l~~~ 305 (307)
.-.++.+++++++|++.
T Consensus 371 ~~L~eal~ri~~al~~~ 387 (388)
T COG1168 371 AILEEALERLKRALKKR 387 (388)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 78888999999888764
No 135
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.94 E-value=7.2e-25 Score=193.81 Aligned_cols=255 Identities=16% Similarity=0.111 Sum_probs=159.8
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcE-----------EEEecCCChHHHHhhc-CCCceEEEEeCCC
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV-----------VKRVNTCDLDEVASAI-GPWTKLVWVESPT 70 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~-----------~~~v~~~d~~~l~~~l-~~~~~~v~~~~~~ 70 (307)
++.++..++.|||+|++++|+|+.+. ..++..|.+ ++.++.+.-+.+...+ .++++++++++|+
T Consensus 111 al~~l~~~~~~gd~V~v~~P~Y~~~~----~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~ 186 (409)
T PRK07590 111 DTGNILDIFGPDNTIAVTDPVYPVYV----DTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPEEKVDIIYLCFPN 186 (409)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCcchH----HHHHHcCCcccccccccccceeEeecccccCCcccCcccCceEEEEeCCC
Confidence 45455567799999999999999888 556677776 7888764211222222 2688999999999
Q ss_pred CCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----C---CccC-CCccEEEeccccccccCCCceeEEEEEcC
Q 021783 71 NPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----S---RPLE-LGADIVMHSATKFIAGHSDVMAGVLAVKG 138 (307)
Q Consensus 71 n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~---~~~~-~~~d~~~~s~~K~~~g~~g~~~G~~~~~~ 138 (307)
||||.+++ +++|+++|++||++||+|++|+.-.. . .... .+..++++||||.+ |.+|+|+||+++++
T Consensus 187 NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~~pGlRiG~~i~~~ 265 (409)
T PRK07590 187 NPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTA-GFTGTRCAYTVVPK 265 (409)
T ss_pred CCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCcccc-CCcCceeEEEEcCH
Confidence 99999997 77888889999999999999973211 1 1111 13578999999999 67899999999986
Q ss_pred hhHHH-----------HHHHHHHhcCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCC
Q 021783 139 ERLAK-----------ELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAG 202 (307)
Q Consensus 139 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 202 (307)
+.+.. .............+...+..+...+. .+....+.+.++.+.+.+.|+.+. + .+
T Consensus 266 ~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~-~~---- 339 (409)
T PRK07590 266 ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAG-F-EV---- 339 (409)
T ss_pred HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC-C-ce----
Confidence 65431 11111111112234344444433332 223334445555666666666431 1 00
Q ss_pred CCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCe
Q 021783 203 LPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDL 281 (307)
Q Consensus 203 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 281 (307)
. . ...+.++|+.+++.....++.+.+ +..||.+.+|..|.. ..+++
T Consensus 340 ---~--------~-~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~---------------------~~~~~ 386 (409)
T PRK07590 340 ---Y--------G-GVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGP---------------------SGEGY 386 (409)
T ss_pred ---e--------c-CCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCC---------------------CCCCE
Confidence 0 0 113567788886432355666655 456898888876321 12468
Q ss_pred EEEEecc--CChHHHHHHHHHH
Q 021783 282 VRISVGI--EDVNDLISDLDKA 301 (307)
Q Consensus 282 iRis~~~--~~~~~~i~~l~~~ 301 (307)
+||++.. +++++.++.|.++
T Consensus 387 iRi~~~~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 387 FRLSAFGSRENVLEAMERIKKA 408 (409)
T ss_pred EEEEccCCHHHHHHHHHHHHhh
Confidence 9999743 4555555555543
No 136
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.94 E-value=2.6e-25 Score=192.79 Aligned_cols=245 Identities=19% Similarity=0.215 Sum_probs=167.6
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
.++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++.+.+++++|++++|+||||...+.
T Consensus 86 ~~~~~l~~~gd~v~~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~ 161 (346)
T TIGR01141 86 LLIRAFLEPGDAVLVPPPTYSMYE----ISAKIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSR 161 (346)
T ss_pred HHHHHhcCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCH
Confidence 344557799999999999997555 4567789999999863 7899999888889999999999999999999
Q ss_pred HHHHHHHHHc--CCEEEEeCccCCCCc-----CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhc
Q 021783 80 RKIAEMAHAH--GALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 152 (307)
Q Consensus 80 ~~l~~~~~~~--~~~li~D~a~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~ 152 (307)
+++.++++.+ |+++|+|++|+.-.. ......+.+++++|+||++ |.+|+|+|+++.+++ +.+.+......
T Consensus 162 ~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~~~~~-~~~~~~~~~~~- 238 (346)
T TIGR01141 162 SDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAF-GLAGLRIGYAIANAE-IIDALNKVRAP- 238 (346)
T ss_pred HHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhh-hchhhhceeeecCHH-HHHHHHhccCC-
Confidence 9999999887 999999999872111 1111234578899999999 567899999998754 44444433221
Q ss_pred CCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC
Q 021783 153 GSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 229 (307)
Q Consensus 153 ~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (307)
...+...+..+...++. +....+.+.++.+.+.+.|++.+++ ++. ...+.++++.+++
T Consensus 239 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~--------------~~~----~~~g~~~~~~~~~ 299 (346)
T TIGR01141 239 -FNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGL--------------EVY----PSDANFVLIRFPR 299 (346)
T ss_pred -CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCC--------------EEC----CCcCCEEEEecCC
Confidence 22233333433333333 2333445555666666666544322 100 1136788888865
Q ss_pred HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHH
Q 021783 230 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 302 (307)
Q Consensus 230 ~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l 302 (307)
+.+++.+.|.++||.+.+|..|. +. ++++|+|++. ++.++.+.++|
T Consensus 300 --~~~~~~~~L~~~gI~v~~g~~f~---------------------~~-~~~iRls~~~---~~~i~~~~~~l 345 (346)
T TIGR01141 300 --DADALFEALLEKGIIVRDLNSYP---------------------GL-PNCLRITVGT---REENDRFLAAL 345 (346)
T ss_pred --CHHHHHHHHHHCCeEEEeCCCcC---------------------CC-CCeEEEecCC---HHHHHHHHHHh
Confidence 46778888888899998876531 11 5679999983 44555555544
No 137
>PRK06855 aminotransferase; Validated
Probab=99.94 E-value=1.8e-24 Score=192.09 Aligned_cols=259 Identities=15% Similarity=0.140 Sum_probs=161.3
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcC--CCceEEEEeCCCCCc
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG--PWTKLVWVESPTNPR 73 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~--~~~~~v~~~~~~n~t 73 (307)
|+..+..+++|||+|++++|+|+.+... .....|++++.++.+ |++++++.+. ++++++++++|+|||
T Consensus 108 al~~~~~l~~~Gd~Vlv~~P~Y~~~~~~---~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPT 184 (433)
T PRK06855 108 AIAKIYGLLRREARVIGPSPAYSTHSSA---EAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPT 184 (433)
T ss_pred HHHHHHHhcCCCCeEEEeCCCCchHHHH---HHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCC
Confidence 4544445789999999999999875421 123457887777642 7899999986 468999999999999
Q ss_pred ccccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----CC---ccCCCccEEEeccccccccCCCceeEEEEEcC----
Q 021783 74 QQICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----SR---PLELGADIVMHSATKFIAGHSDVMAGVLAVKG---- 138 (307)
Q Consensus 74 G~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~~---~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~---- 138 (307)
|.+++ +++|+++|++||++||+|++|+.-.+ +. ....+..++++||||.+ +.+|+|+||+++++
T Consensus 185 G~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~-~~pGlRiG~ii~p~~~~~ 263 (433)
T PRK06855 185 GAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKEL-PWPGSRCGWIEVYNADKD 263 (433)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCcccc-CCCcceEEEEEEeCCchh
Confidence 99997 77888999999999999999973221 11 11113469999999999 66899999999842
Q ss_pred hhHHHHHHHHHHh--cCCCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchH
Q 021783 139 ERLAKELYFLQNA--EGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 210 (307)
Q Consensus 139 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~ 210 (307)
+.+.+........ .....+...+..+...++. ++...+.+.++.+.+.+.|++.+.+ .
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~--------------~ 329 (433)
T PRK06855 264 EVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGL--------------K 329 (433)
T ss_pred hHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCe--------------e
Confidence 2222222222111 1122334455555555432 2233344445555555556543211 1
Q ss_pred HHhhhccCCCceEEEEeCCHH---------------------------HHHHHH-hcCCcceeecCCCCccceeeccccc
Q 021783 211 LHYSQAKGAGSVLSFLTGSLA---------------------------LSKHVV-ETTKYFSITVSFGSVKSLISMPCFM 262 (307)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~-~~l~~~gi~v~~g~~~~~~~~p~~~ 262 (307)
.. . ...+.++|+.+++.. ....+. ..+...||.+.+|..|..
T Consensus 330 ~~--~-p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~------- 399 (433)
T PRK06855 330 VN--R-TNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCT------- 399 (433)
T ss_pred cc--C-CCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCC-------
Confidence 00 1 113456666665310 122333 335667999999887531
Q ss_pred CCCCCcHHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHhc
Q 021783 263 SHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRT 304 (307)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~ 304 (307)
..+.+|||++. +++++.++.|.+++++
T Consensus 400 ---------------~~~~~Rls~~~~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 400 ---------------ELNGFRVTLLERDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred ---------------CCCceEEEECCCcHHHHHHHHHHHHHHHHH
Confidence 12349999985 5666667777766653
No 138
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.94 E-value=1.2e-24 Score=192.01 Aligned_cols=254 Identities=16% Similarity=0.147 Sum_probs=159.1
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCc-----------EEEEecCCChHHHHhhc--CCCceEEEEeCC
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV-----------VVKRVNTCDLDEVASAI--GPWTKLVWVESP 69 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~-----------~~~~v~~~d~~~l~~~l--~~~~~~v~~~~~ 69 (307)
++.++..++.+||+|++++|+|+.+. ..++..|+ +++.++.++.+.+...+ .++++++++++|
T Consensus 107 al~~l~~l~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP 182 (402)
T TIGR03542 107 DVFRLQSLFGSDNTVAVQDPVYPAYV----DSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSP 182 (402)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCcchH----HHHHHcCCccccccccccceEEEeecchhhCCCCCccccCCceEEEEeCC
Confidence 44455567789999999999998887 66677888 88888764222221112 157899999999
Q ss_pred CCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCc----C-Cc---cC-CCccEEEeccccccccCCCceeEEEEEc
Q 021783 70 TNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL----S-RP---LE-LGADIVMHSATKFIAGHSDVMAGVLAVK 137 (307)
Q Consensus 70 ~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~----~-~~---~~-~~~d~~~~s~~K~~~g~~g~~~G~~~~~ 137 (307)
+||||.+++ +++|+++|++||++||+|++|..... + .. .. .+..++++||||.+ |.+|+|+||++++
T Consensus 183 ~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-g~pGlRiG~~i~~ 261 (402)
T TIGR03542 183 NNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTA-GFTGVRLGWTVVP 261 (402)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCcccc-CCCCcceEEEEec
Confidence 999999997 88899999999999999999973211 1 11 11 24578899999999 6789999999998
Q ss_pred ChhHH-------HHHHHHHHhcCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCC
Q 021783 138 GERLA-------KELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE 205 (307)
Q Consensus 138 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~ 205 (307)
++... ..............+...+..+...+. .+....+...++.+.+.+.|+... + .+
T Consensus 262 ~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~-~~------- 332 (402)
T TIGR03542 262 KELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAG-F-KV------- 332 (402)
T ss_pred HHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcC-c-ee-------
Confidence 66431 111111111122233334433333332 122233444555556666665431 1 00
Q ss_pred CCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEE
Q 021783 206 HPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRI 284 (307)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRi 284 (307)
. . ...+.++++++++..+..++.+.+. ..||.+.+|..|.. ..++++||
T Consensus 333 ~--------~-~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRi 382 (402)
T TIGR03542 333 Y--------G-GEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGP---------------------SGEGFVRF 382 (402)
T ss_pred c--------C-CCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCC---------------------CCCCEEEE
Confidence 0 0 1135688888865333556777654 56999988876421 02578999
Q ss_pred Eecc--CChHHHHHHHHH
Q 021783 285 SVGI--EDVNDLISDLDK 300 (307)
Q Consensus 285 s~~~--~~~~~~i~~l~~ 300 (307)
+++. +++++.++.|++
T Consensus 383 s~~~~~~~l~~~l~~l~~ 400 (402)
T TIGR03542 383 SAFGKRENIVEACERIKE 400 (402)
T ss_pred EecCCHHHHHHHHHHHHh
Confidence 9854 344444444443
No 139
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.94 E-value=1.1e-24 Score=189.64 Aligned_cols=132 Identities=23% Similarity=0.262 Sum_probs=111.8
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcC-------CCceEEEEeCCC
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG-------PWTKLVWVESPT 70 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~-------~~~~~v~~~~~~ 70 (307)
.++.+++++||+|+++.++|.+.. ..++..|++++.++.+ |+++++++++ ++++++++++|+
T Consensus 74 ~~l~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~ 149 (361)
T cd06452 74 AVMHSLCEKGDWVVVDGLAHYTSY----VAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVD 149 (361)
T ss_pred HHHHHhcCCCCEEEEcCCcchHHH----HHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCC
Confidence 455667899999999999998887 4467889999998753 6788988875 378999999999
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 71 NPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 71 n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
||||...|+++|.++|+++|+++|+|++|+.+..+ ....+++|++++|+||+++++. ++|+++++++...
T Consensus 150 n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~--~~G~l~~~~~~~~ 220 (361)
T cd06452 150 GNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASA--PIGVLATTEEWAD 220 (361)
T ss_pred CCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCC--CeEEEEECHHHHH
Confidence 99999999999999999999999999999988765 5666789999999999996444 5999999865443
No 140
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=9.8e-25 Score=189.67 Aligned_cols=248 Identities=14% Similarity=0.142 Sum_probs=166.6
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCcccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQI 76 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 76 (307)
++ .++.++++|||+|++++|+|+.+. ..++..|++++.++.+ |++++++ +++++++++|+||||.+
T Consensus 89 al~~~~~~l~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~ 160 (353)
T PRK05387 89 VLAHAFLAFFNHDRPLLFPDITYSFYP----VYAGLYGIPYEEIPLDDDFSIDVEDYLR----PNGGIIFPNPNAPTGIA 160 (353)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCHHHHH----HHHHHcCCEEEEeecCCCCCCCHHHHHh----cCCEEEEeCCCCCCCCC
Confidence 44 344567899999999999997666 5567789999998874 5666653 45788999999999999
Q ss_pred ccHHHHHHHHHHc-CCEEEEeCccCCCC----cCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh
Q 021783 77 CDIRKIAEMAHAH-GALLLVDNSIMSPV----LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 151 (307)
Q Consensus 77 ~~~~~l~~~~~~~-~~~li~D~a~~~~~----~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~ 151 (307)
++.+++.++++.+ ++++|+|++|.... .+.....+.+++++|+||.+ |.+|+|+||++++++ +.+.+......
T Consensus 161 ~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~GlR~G~~~~~~~-~~~~l~~~~~~ 238 (353)
T PRK05387 161 LPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSR-SLAGLRVGFAIGHPE-LIEALNRVKNS 238 (353)
T ss_pred CCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhh-cchhhhceeeecCHH-HHHHHHHhhcc
Confidence 9999999999886 99999999986211 11112345789999999999 678999999998744 54445444332
Q ss_pred c-CCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEe
Q 021783 152 E-GSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 227 (307)
Q Consensus 152 ~-~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 227 (307)
. ....+...+..+...+.. ++...+++.++.+.+.+.|++.. + .+ . ...++++++.+
T Consensus 239 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~-~----------------~~~~~~~~~~~ 299 (353)
T PRK05387 239 FNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALG-F-EV-L----------------PSKANFVFARH 299 (353)
T ss_pred CCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-C-eE-C----------------CCcCcEEEEEC
Confidence 2 223344455544444432 23334445555566666665431 1 10 1 11356777776
Q ss_pred CCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHh
Q 021783 228 GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 303 (307)
Q Consensus 228 ~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~ 303 (307)
++.+ ..++.+.|.++||.++.... + ..++++|+|++. ++++++++.|.+++.
T Consensus 300 ~~~~-~~~~~~~l~~~gi~v~~~~~------~-----------------~~~~~iRis~~~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 300 PSHD-AAELAAKLRERGIIVRHFNK------P-----------------RIDQFLRITIGTDEEMEALVDALKEILA 352 (353)
T ss_pred CCCC-HHHHHHHHHHCCEEEEECCC------C-----------------CCCCeEEEEeCCHHHHHHHHHHHHHHhh
Confidence 6433 67788888888998753110 0 124679999985 667777777777654
No 141
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=3.5e-25 Score=194.92 Aligned_cols=260 Identities=16% Similarity=0.126 Sum_probs=174.6
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC----CceEEEEeCCCCCccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP----WTKLVWVESPTNPRQQ 75 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~----~~~~v~~~~~~n~tG~ 75 (307)
.++..++++||+|++++++|++.. |...++..|++++.++.+ |++++++.+++ ++++|+++|++|+||.
T Consensus 75 ~a~~~~~~~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~ 152 (401)
T PLN02409 75 SALTNTLSPGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGV 152 (401)
T ss_pred HHHHhcCCCCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccc
Confidence 445567899999999999887654 446778889999999864 68999999874 7999999999999999
Q ss_pred cccHHHHHHH--HHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH-----
Q 021783 76 ICDIRKIAEM--AHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF----- 147 (307)
Q Consensus 76 ~~~~~~l~~~--~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~----- 147 (307)
+.|+++|.++ |+++|+++++|++|+.|..+ +..++++|++++|+|||+++|+| .|+++++++.+......
T Consensus 153 ~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~G--~G~l~~~~~~~~~~~~~~~~~~ 230 (401)
T PLN02409 153 TNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTG--LGIVCASPKALEASKTAKSPRV 230 (401)
T ss_pred cCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEcCccccCcCCC--cceeEECHHHHHHHhcCCCCCe
Confidence 9999999999 99999999999999988877 77788999999999999999888 99999986654332110
Q ss_pred ------HH-H-hcC----CCCChhhHHHHhhccccH-----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchH
Q 021783 148 ------LQ-N-AEG----SGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 210 (307)
Q Consensus 148 ------~~-~-~~~----~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~ 210 (307)
.. . ..+ .+++....+....+++.+ +...++..+..+.+.+.++.. ++ +
T Consensus 231 ~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~--------------~ 295 (401)
T PLN02409 231 FFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GL--------------K 295 (401)
T ss_pred ecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CC--------------e
Confidence 00 0 011 122222233333333322 222333344444455555432 11 1
Q ss_pred HHhhhccC-CCceEEEEeCCHHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 211 LHYSQAKG-AGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 211 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
+..+.+.. ...++++.++...+..++.+.+ ..+||.+..|... .....+||+..-
T Consensus 296 ~~~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~-----------------------~~~~~~Rig~~g 352 (401)
T PLN02409 296 LCTKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNK-----------------------VAGKVFRIGHLG 352 (401)
T ss_pred eccCChhhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCc-----------------------ccCCEEEEcCCC
Confidence 11111111 2345667664322355666555 4568888776530 024569999953
Q ss_pred ----CChHHHHHHHHHHHhcCC
Q 021783 289 ----EDVNDLISDLDKALRTGP 306 (307)
Q Consensus 289 ----~~~~~~i~~l~~~l~~~~ 306 (307)
+|+...++.|.++|++++
T Consensus 353 ~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 353 NVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHcC
Confidence 677777888888887654
No 142
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.4e-24 Score=189.39 Aligned_cols=252 Identities=20% Similarity=0.198 Sum_probs=169.0
Q ss_pred HHHHH-HHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcC-CCceEEEEeCCCCCcccc
Q 021783 3 ALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIG-PWTKLVWVESPTNPRQQI 76 (307)
Q Consensus 3 al~~~-~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~-~~~~~v~~~~~~n~tG~~ 76 (307)
++..+ ..+++|||.|++++|+|+.+. ..++..|++++.+|.+ |++++.+.+. .+++++++++|+||||.+
T Consensus 96 ~l~~~~~~~~~~gd~vlv~~p~y~~~~----~~~~~~g~~~~~vp~~~~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~ 171 (369)
T PRK08153 96 LLGLIVRLYVEPGDPVVTSLGAYPTFN----YHVAGFGGRLVTVPYRDDREDLDALLDAARRENAPLVYLANPDNPMGSW 171 (369)
T ss_pred HHHHHHHHhcCCCCEEEECCCcchHHH----HHHHHcCCeEEEeeCCCCCCCHHHHHHHhcccCCcEEEEeCCCCCCCCC
Confidence 44333 346899999999999998877 4456689999988863 6777776664 688999999999999999
Q ss_pred ccHHHHHHHHHHc--CCEEEEeCccCCCCc----CCc-cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 77 CDIRKIAEMAHAH--GALLLVDNSIMSPVL----SRP-LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 77 ~~~~~l~~~~~~~--~~~li~D~a~~~~~~----~~~-~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
++.+++.++++.+ ++++|+|++|..... ... ...+..++++||||.+ |.+|+|+||++++++ +.+.+....
T Consensus 172 ~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~-g~~GlRiG~~v~~~~-~~~~l~~~~ 249 (369)
T PRK08153 172 HPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAY-GLAGARVGYAIGAPG-TIKAFDKVR 249 (369)
T ss_pred CCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhc-cCcchheeeeecCHH-HHHHHHHhh
Confidence 9988777777655 899999999963221 111 1234679999999999 678999999999754 444444433
Q ss_pred HhcCCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 150 NAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
.. ...+...+..+...++. +....+...++.+.+.+.+++.. +... ...++++++.
T Consensus 250 ~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g---------~~~~----------p~~~~f~~~~ 308 (369)
T PRK08153 250 NH--FGMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARANG---------LTPL----------PSATNFVAID 308 (369)
T ss_pred cC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC---------CccC----------CCcCcEEEEE
Confidence 22 23455566665555542 12223333444444555554321 1000 1235677777
Q ss_pred eC-CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhc
Q 021783 227 TG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRT 304 (307)
Q Consensus 227 ~~-~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~ 304 (307)
++ +.+.+..+.+++..+||.++..... ..++++|||++. ++++.+++.|.+.+..
T Consensus 309 ~~~~~~~a~~l~~~l~~~Gi~v~~p~~~-----------------------~~~~~iRis~~~~~~~~~~~~al~~~~~~ 365 (369)
T PRK08153 309 CGRDGAFARAVLDGLIARDIFVRMPGVA-----------------------PLDRCIRVSCGPDEELDLFAEALPEALEA 365 (369)
T ss_pred CCCCcccHHHHHHHHHHCCeEEeeCCCC-----------------------CCCCeEEEecCCHHHHHHHHHHHHHHHHH
Confidence 64 3345788898888899988532210 024679999986 7888888888887753
No 143
>PRK08354 putative aminotransferase; Provisional
Probab=99.93 E-value=1.7e-24 Score=184.49 Aligned_cols=239 Identities=17% Similarity=0.164 Sum_probs=153.9
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc---H
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD---I 79 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---~ 79 (307)
|+.++..++.+||+|++++|+|+.+. ..++..|++++.++ .|++.+++.++ +++++++++|+||||.+++ +
T Consensus 66 al~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~~~-~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l 139 (311)
T PRK08354 66 ALYLIGILALRDRKVIIPRHTYGEYE----RVARFFAARIIKGP-NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKEL 139 (311)
T ss_pred HHHHHHHhhCCCCeEEEeCCCcHHHH----HHHHHcCCEEeecC-CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHH
Confidence 34334455568999999999999888 66788999998876 47888988876 5678999999999999997 6
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCCh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 158 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (307)
++|+++|+++|+++|+|++|...... .....+..++++||||.+ +.+|+|.||+++ ..+.+...... ...+.
T Consensus 140 ~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~-~l~GlRiG~~v~----~~~~l~~~~~~--~~~~~ 212 (311)
T PRK08354 140 KPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSY-GLPGIRVGYVKG----FEEAFRSVRMP--WSIGS 212 (311)
T ss_pred HHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhc-CCccceeeeeee----hHHHHHHcCCC--ccCCH
Confidence 77788889999999999999644322 112246789999999999 778999999998 22223322211 12222
Q ss_pred hhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHh
Q 021783 159 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVE 238 (307)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (307)
....++...++. ..+.+.++.+.+.+..+... .. +. . ...++++++.+.+ ..++.+
T Consensus 213 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~---~~----l~-~----------~~~~~~~~~~~~~---~~~~~~ 268 (311)
T PRK08354 213 TGYAFLEFLIED---DFEHLRKTMPLIWREKERFE---KA----LY-V----------KSDANFFIKDVGD---AEKFVE 268 (311)
T ss_pred HHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHH---Hh----cC-C----------CCCCcEEEEECCC---HHHHHH
Confidence 222222222221 11222222222222211110 00 00 0 1135566666542 456777
Q ss_pred cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHH
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKA 301 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~ 301 (307)
.+.++||.++.|..|. .++++||+++. ++.+++++.|++.
T Consensus 269 ~l~~~gv~v~~g~~f~-----------------------~~~~iRi~~~~~~~~~~l~~al~~~ 309 (311)
T PRK08354 269 FLKRNGILVRDCTSFG-----------------------LPGYIRFSVRDREENEKLIRALREW 309 (311)
T ss_pred HHHHCCeEEEecccCC-----------------------CCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 7788899999987632 14679999996 4567777776654
No 144
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=3.6e-25 Score=192.10 Aligned_cols=244 Identities=16% Similarity=0.160 Sum_probs=159.2
Q ss_pred HHH-HHHHhcCCC-CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccc
Q 021783 3 ALA-AVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al~-~~~~~~~~g-d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~ 75 (307)
++. ++.+++++| |+|++++|+|+.+. ..++..|++++.+|.+ |++.++ .+ +++++|++++|+||||.
T Consensus 89 ~i~~~~~~~~~~g~d~vlv~~P~y~~y~----~~~~~~g~~v~~v~~~~~~~~~~~~l~-~~-~~~~li~i~nP~NPTG~ 162 (354)
T PRK04635 89 AIELLIRAFCEPGQDSIACFGPTYGMYA----ISAETFNVGVKALPLTADYQLPLDYIE-QL-DGAKLVFICNPNNPTGT 162 (354)
T ss_pred HHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEEecCCCCCCCHHHHH-hc-cCCCEEEEeCCCCCCCc
Confidence 453 334567888 99999999998766 5577889999999874 566665 33 68999999999999999
Q ss_pred cccHHHHHHHHHHc-CCEEEEeCccCCCCcC-----CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 76 ICDIRKIAEMAHAH-GALLLVDNSIMSPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 76 ~~~~~~l~~~~~~~-~~~li~D~a~~~~~~~-----~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
+++.+++.++++.. ++++|+|++|...... .....+..++++||||++ |.+|+|.||++++++ +.+.+....
T Consensus 163 ~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~-~l~GlRlG~~i~~~~-~~~~l~~~~ 240 (354)
T PRK04635 163 VIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAF-ALAGARCGFTLANEE-LIEILMRVI 240 (354)
T ss_pred cCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHh-hhhHHHHhhhhCCHH-HHHHHHhhc
Confidence 99999999998874 7999999999643211 112235678999999999 778999999998755 434333322
Q ss_pred HhcCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 150 NAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
. ....+...+..+...+. .+....+.+.++.+.+.+.|++.+.+ ++. ...+++++
T Consensus 241 ~--~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~--------------~~~----~~~g~f~~ 300 (354)
T PRK04635 241 A--PYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGA--------------KVL----EGNGNYVL 300 (354)
T ss_pred C--CCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCc--------------eEC----CCCCcEEE
Confidence 1 12223233333333332 22333344455555666666543211 111 11356777
Q ss_pred EEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHH
Q 021783 225 FLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDK 300 (307)
Q Consensus 225 ~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~ 300 (307)
+++++ ...+.+.+.++||.++.+.. ...++++|||++. ++++++++.|++
T Consensus 301 ~~~~~---~~~~~~~l~~~gv~v~~~~~-----------------------~~~~~~lRis~~~~e~~~~l~~al~~ 351 (354)
T PRK04635 301 AKFDD---VDAVFKALWDAGIVARAYKD-----------------------PRLANCIRFSFSNRAETDKLIGLIRN 351 (354)
T ss_pred EECCC---HHHHHHHHHHCCEEEEECCC-----------------------CCCCCeEEEEeCCHHHHHHHHHHHHH
Confidence 77763 44566667778898864321 0024679999985 566666666654
No 145
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.93 E-value=7.4e-25 Score=188.27 Aligned_cols=244 Identities=18% Similarity=0.207 Sum_probs=165.0
Q ss_pred cHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc---
Q 021783 2 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD--- 78 (307)
Q Consensus 2 aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~--- 78 (307)
+++.++..++.+| +|++++|+|..+. ..++..|.+++.++ |++++++.+ .+++++++++|+||||.+++
T Consensus 75 ~~i~~~~~~l~~g-~vl~~~p~y~~~~----~~~~~~g~~~~~~~--d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~~~~ 146 (330)
T TIGR01140 75 EAIYLLPRLLAPG-RVLVLAPTYSEYA----RAWRAAGHEVVELP--DLDRLPAAL-EELDVLVLCNPNNPTGRLIPPET 146 (330)
T ss_pred HHHHHHHHHhCCC-eEEEeCCCcHHHH----HHHHHcCCEEEEeC--CHHHHHhhc-ccCCEEEEeCCCCCCCCCCCHHH
Confidence 3454555567788 6999999998877 55678899999988 899999988 46789999999999999998
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcC-Cc----cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcC
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLS-RP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 153 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~-~~----~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~ 153 (307)
+++|+++|+++|+++|+|++|...... .. ...+.+++++|+||++ |.+|+|+||++++++ +.+.+..... .
T Consensus 147 ~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~i~~~~~-~~~~l~~~~~--~ 222 (330)
T TIGR01140 147 LLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFF-GLAGLRLGFVVAHPA-LLARLREALG--P 222 (330)
T ss_pred HHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhh-cCchhhhhheeCCHH-HHHHHHhcCC--C
Confidence 777889999999999999999643321 11 1236789999999999 677999999999865 4444443322 1
Q ss_pred CCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH
Q 021783 154 SGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 230 (307)
Q Consensus 154 ~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (307)
...+...+..+...++. .....+.+.++.+.+.+.|+..+.+ . . . .+.+.++++.+++
T Consensus 223 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~-------------~---~-~~~~~f~~~~~~~- 283 (330)
T TIGR01140 223 WTVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGL-E-------------V---V-GGTALFLLVRTPD- 283 (330)
T ss_pred CCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCc-e-------------E---C-CCCCeEEEEEcCC-
Confidence 22333444444433332 1223445555556666666654321 0 0 0 1235677777653
Q ss_pred HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHH
Q 021783 231 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 302 (307)
Q Consensus 231 ~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l 302 (307)
..++.+.|.++||.+.+|..|. +...+++||+++..+ +. +.|.++|
T Consensus 284 --~~~l~~~l~~~gi~v~pg~~f~---------------------~~~~~~iRi~~~~~~--~~-~~~~~~l 329 (330)
T TIGR01140 284 --AAALHEALARRGILIRDFDNFP---------------------GLDPRYLRFALPTDE--EN-DRLEEAL 329 (330)
T ss_pred --HHHHHHHHHHCCEEEEECCCCC---------------------CCCCCEEEEEecCHH--HH-HHHHHhh
Confidence 4567788888899999888742 113467999998633 22 5554444
No 146
>PRK09105 putative aminotransferase; Provisional
Probab=99.93 E-value=9.6e-25 Score=190.11 Aligned_cols=243 Identities=18% Similarity=0.225 Sum_probs=160.2
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
.++.+++++||+|++++|+|+.+. ..++..|++++.++.+ |++++++. .++++++++++|+||||.+++.
T Consensus 110 ~~~~~l~~~gd~Vli~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~ 184 (370)
T PRK09105 110 YAVLAFTSPTAGLVTADPTYEAGW----RAADAQGAPVAKVPLRADGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPR 184 (370)
T ss_pred HHHHHHcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEecCCCCCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCH
Confidence 344457899999999999998887 6678899999999863 67888776 4678999999999999999998
Q ss_pred HHHHHHHHH--cCCEEEEeCccCCCC-cC---Cc-cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhc
Q 021783 80 RKIAEMAHA--HGALLLVDNSIMSPV-LS---RP-LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 152 (307)
Q Consensus 80 ~~l~~~~~~--~~~~li~D~a~~~~~-~~---~~-~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~ 152 (307)
+++.++++. +++++|+|++|.... .+ +. ......++++||||.+ |.+|+|+||++++++ +.+.+... .
T Consensus 185 ~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~-g~~GlRiG~~v~~~~-~i~~l~~~---~ 259 (370)
T PRK09105 185 ADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLY-GMAGMRLGLAAARPD-LLAKLARF---G 259 (370)
T ss_pred HHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhh-cCCccceeeeecCHH-HHHHHHhc---C
Confidence 888888764 489999999995211 11 11 1234679999999999 778999999998755 43434333 1
Q ss_pred CCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC
Q 021783 153 GSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 229 (307)
Q Consensus 153 ~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (307)
....+...+..+...+.. ++...+...++.+.+.+.|++.. + . +. ...++++++.++.
T Consensus 260 ~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~--------~------~~----~~~~~f~~~~~~~ 320 (370)
T PRK09105 260 HNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKKG-Y--------K------CT----PSQANCFMVDVKR 320 (370)
T ss_pred CCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC-C--------C------cC----CCCCcEEEEeCCC
Confidence 222333344444444432 22233444555555666665431 1 0 00 1135566666641
Q ss_pred HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHH
Q 021783 230 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKAL 302 (307)
Q Consensus 230 ~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l 302 (307)
+..++.+.|.++||.++ ..+. ..++++|||++. ++++++++.|.+.+
T Consensus 321 --~~~~l~~~L~~~gI~v~--~~~~----------------------~~~~~~Ris~~~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 321 --PAKAVADAMAKQGVFIG--RSWP----------------------IWPNWVRVTVGSEEEMAAFRSAFAKVM 368 (370)
T ss_pred --CHHHHHHHHHHCCcEEe--cCCC----------------------CCCCeEEEEcCCHHHHHHHHHHHHHHh
Confidence 25667777777788772 2210 025679999986 45677777776654
No 147
>PRK03321 putative aminotransferase; Provisional
Probab=99.93 E-value=3.7e-25 Score=192.13 Aligned_cols=243 Identities=16% Similarity=0.196 Sum_probs=169.2
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
++..+++|||+|+++.|+|..+. ..++..|++++.++.+ |++++++.++++++++++++|+||||.++|.+
T Consensus 90 ~~~~~~~~gd~Vli~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~ 165 (352)
T PRK03321 90 LVQATAGPGDEVIFAWRSFEAYP----ILVQVAGATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPA 165 (352)
T ss_pred HHHHhcCCCCEEEeCCCCHHHHH----HHHHHcCCEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHH
Confidence 34456899999999999997665 4567789999999875 78999999988999999999999999999999
Q ss_pred HHHHHHHH--cCCEEEEeCccCCCCcC--------CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH
Q 021783 81 KIAEMAHA--HGALLLVDNSIMSPVLS--------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 150 (307)
Q Consensus 81 ~l~~~~~~--~~~~li~D~a~~~~~~~--------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~ 150 (307)
++.++|++ +++++|+|++|...... .....+..++++|+||.+ |.+|+|+||++++++ +.+.+....
T Consensus 166 ~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~~v~~~~-~~~~~~~~~- 242 (352)
T PRK03321 166 ELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAY-GLAGLRVGYAVGHPE-VIAALRKVA- 242 (352)
T ss_pred HHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHh-hhHHHhhhhhcCCHH-HHHHHHHhc-
Confidence 99999998 59999999999632211 111235679999999999 678999999999754 544444332
Q ss_pred hcCCCCChhhHHHHhhccc---cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEe
Q 021783 151 AEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 227 (307)
Q Consensus 151 ~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 227 (307)
.....+...+..+...+. .+..+.++..+....+.+.|++.. + .. . ...+.++++.+
T Consensus 243 -~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~~---------~------~~---~-~~~g~~i~i~l 302 (352)
T PRK03321 243 -VPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAAG---------W------TV---P-PSQANFVWLPL 302 (352)
T ss_pred -CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC---------C------cc---C-CCCCCEEEEeC
Confidence 223344455554444443 233333334444444555554321 1 00 0 12366778877
Q ss_pred CCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhc
Q 021783 228 GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRT 304 (307)
Q Consensus 228 ~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~ 304 (307)
.. ....+.+.+.++||.++.- +++++||+++. ++.+++++.|.++++.
T Consensus 303 ~~--~~~~~~~~l~~~gI~v~~~---------------------------~~~~iRi~~~~~~~~~~~~~al~~~~~~ 351 (352)
T PRK03321 303 GE--RTADFAAAAAEAGVVVRPF---------------------------AGEGVRVTIGAPEENDAFLRAARAWRAG 351 (352)
T ss_pred CC--CHHHHHHHHHHCCEEEEcc---------------------------CCCcEEEeeCCHHHHHHHHHHHHHHhcc
Confidence 43 2567778888889977541 12349999986 8999999999888754
No 148
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.93 E-value=4.9e-24 Score=187.98 Aligned_cols=254 Identities=13% Similarity=0.136 Sum_probs=164.3
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCC------CceEEEEeCCCCCcccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~ 78 (307)
+++.+++++||+|++++++|+++... ++..+.+.+.++..|++++++.+++ ++++|++++++||||.+.|
T Consensus 113 ~~~~~l~~~gd~vi~~~~~~~s~~~~----~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~ 188 (393)
T TIGR01822 113 GLFETLLGAEDAIISDALNHASIIDG----VRLCKAKRYRYANNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP 188 (393)
T ss_pred HHHHHhCCCCCEEEEeccccHHHHHH----HHhcCCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC
Confidence 45556789999999999999988743 4455666666677899999988863 7889999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcC-C--------ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH-
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLS-R--------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL- 148 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~-~--------~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~- 148 (307)
+++|.++|++||+++|+|++|+.|... . ....++|++++|+||+++|+ ++|+++++++ +.+.+...
T Consensus 189 l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~---r~G~~~~~~~-~~~~l~~~~ 264 (393)
T TIGR01822 189 LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGA---SGGFTTARKE-VVELLRQRS 264 (393)
T ss_pred HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCC---CcEEEEeCHH-HHHHHHHhC
Confidence 999999999999999999999766532 1 11125899999999999654 4899988754 44444332
Q ss_pred HHh-cCCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 149 QNA-EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 149 ~~~-~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
... ...+.++........+++.+ +...+++.++.+.+.+.|+.. + +.-. ...++++.
T Consensus 265 ~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g--------~~~~----------~~~~~~~~ 325 (393)
T TIGR01822 265 RPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA-G--------FDIK----------PADHPIIP 325 (393)
T ss_pred ccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-C--------CCCC----------CCCCCEEE
Confidence 111 12222332222233333222 223344455555566655532 1 1100 01244666
Q ss_pred EEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHH
Q 021783 225 FLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDK 300 (307)
Q Consensus 225 ~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~ 300 (307)
+.+.+......+.+.|..+||.++ +..+.. ......++|+|++. +++++.++.|.+
T Consensus 326 i~~~~~~~~~~l~~~L~~~gI~v~-~~~~~~-------------------~~~~~~~iRis~~~~~t~edi~~~~~~l~~ 385 (393)
T TIGR01822 326 VMLYDAVLAQRFARRLLEEGIYVT-GFFYPV-------------------VPKGQARIRVQISAAHTEEQLDRAVEAFTR 385 (393)
T ss_pred EEeCCHHHHHHHHHHHHHCCeeEe-eeCCCC-------------------CCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 766654457788888888899886 432110 00123469999976 566666666666
Q ss_pred HHhcC
Q 021783 301 ALRTG 305 (307)
Q Consensus 301 ~l~~~ 305 (307)
+++++
T Consensus 386 ~~~~~ 390 (393)
T TIGR01822 386 IGREL 390 (393)
T ss_pred HHHHh
Confidence 65544
No 149
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=1.3e-24 Score=188.91 Aligned_cols=246 Identities=23% Similarity=0.208 Sum_probs=165.9
Q ss_pred CCC-CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 021783 12 GTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 12 ~~g-d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
++| ++|+++..+|+++...+..+ +..|++++.++.+ |++++++.++++++++++++++||||.+.|+++|.++
T Consensus 85 ~~g~~~vi~~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l 163 (353)
T TIGR03235 85 QKGKKHIITSAIEHPAVLEPIRAL-ERNGFTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEV 163 (353)
T ss_pred cCCCCeeeEcccccHHHHHHHHHH-HhcCCEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHH
Confidence 356 88999999999887776543 5679999999863 7899999998889999999999999999999999999
Q ss_pred HHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHH-HHHH-H------HhcCCCC
Q 021783 86 AHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE-LYFL-Q------NAEGSGL 156 (307)
Q Consensus 86 ~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~-~~~~-~------~~~~~~~ 156 (307)
|+++|+++++|++|+.|..+ +...+++|++++|+||++ ||+| .|+++++++..... .... . .....+.
T Consensus 164 ~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~-gp~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (353)
T TIGR03235 164 LEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIY-GPKG--IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTL 240 (353)
T ss_pred HHHcCCEEEEEchhhcCCccccccccCCCEEEeehhhcC-CCCc--eEEEEEccCcccccccCceeeCCCCcCccccCCC
Confidence 99999999999999998876 666788999999999997 7888 89999987633211 1100 0 0011122
Q ss_pred ChhhHHHHhhccccH----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHH
Q 021783 157 APFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLAL 232 (307)
Q Consensus 157 ~~~~~~~~~~~l~~~----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (307)
+.........+++.+ +.+.+++.+..+.+.+.++. .++ ++..++.....+++.|.+++.+
T Consensus 241 ~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~-~g~--------------~~~~~~~~~~~~i~~~~~~~~~- 304 (353)
T TIGR03235 241 PVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT-LGV--------------KLNGDPAETIPHILNFSIDGVN- 304 (353)
T ss_pred ChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-CCe--------------EEeCCcccccCCEEEEEeCCcC-
Confidence 222222222233322 23333344444444444433 222 1111111123567888777654
Q ss_pred HHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCC----CeEEEEe
Q 021783 233 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE----DLVRISV 286 (307)
Q Consensus 233 ~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~~iRis~ 286 (307)
...+.+.|+. +|.++.|..++.- ...++.++.+.|.++ +.+|+|+
T Consensus 305 ~~~v~~~L~~-~i~v~~g~~~~~~--------~~~~~~~l~~~g~~~~~~~~~~r~s~ 353 (353)
T TIGR03235 305 SEALIVNLRA-DAAVSTGSACSSS--------KYEPSHVLQAMGLDTDRARGAIRFSW 353 (353)
T ss_pred HHHHHHHHhC-CeEEEchhhcCCC--------CCCCCHHHHHcCCCHHHhCccEEEeC
Confidence 6778888865 8999988874311 112345677778764 8899885
No 150
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=3.4e-24 Score=187.23 Aligned_cols=246 Identities=19% Similarity=0.216 Sum_probs=168.2
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
++.+++++||+|+++.|+|+.+. ..++..|++++.++.+ |++++++.++++++++++++|+||||.+++.+
T Consensus 104 ~~~~~~~~gd~vli~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~ 179 (371)
T PRK05166 104 ICRAVLRPGDRVVTLYPSFPLHE----DYPTMMGARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTAD 179 (371)
T ss_pred HHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence 33456799999999999998776 5677889999999874 68999999888899999999999999999977
Q ss_pred HHHHHHHH--cCCEEEEeCccCCCCc----CC----cc-CCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 81 KIAEMAHA--HGALLLVDNSIMSPVL----SR----PL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 81 ~l~~~~~~--~~~~li~D~a~~~~~~----~~----~~-~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
++.++++. .++++|+|++|..-.. +. .. ..+..++++||||.+ |.+|+|+||+++.++.+.+.+....
T Consensus 180 ~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~-~l~GlRiG~~i~~~~~l~~~~~~~~ 258 (371)
T PRK05166 180 QLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAY-GLAGLRVGYGLVSDPELVGLLDRVR 258 (371)
T ss_pred HHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhh-hcchhheeeeecCCHHHHHHHHHhc
Confidence 77776664 3789999999863221 11 11 123579999999999 7789999998886666666555443
Q ss_pred HhcCCCCChhhHHHHhhccc---cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 150 NAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
.. ...+...+..+...+. .++...+...++.+.+.+.|+.+. + .+ . ...+.++++.
T Consensus 259 ~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~-~~-~----------------p~~g~fl~~~ 317 (371)
T PRK05166 259 TP--FNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMG-Y-RI-A----------------PSRANFLFFD 317 (371)
T ss_pred cC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCc-C-ee-C----------------CCcCCEEEEe
Confidence 22 2234444434344332 233333444555556666666431 1 00 0 1135677777
Q ss_pred eCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHH
Q 021783 227 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKAL 302 (307)
Q Consensus 227 ~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l 302 (307)
++. ...++.+.+..+||.+++|..+ + .++++||+++. ++.+++++.|++.+
T Consensus 318 ~~~--~~~~l~~~l~~~gi~v~p~~~~----------------------~-~~~~iRi~~~~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 318 ARR--PASAVAEALLRQGVIVKPWKQP----------------------G-FETFIRVSIGSPEENDHFVAALDKVL 369 (371)
T ss_pred CCC--CHHHHHHHHHHCCeEEecCCCC----------------------C-CCCeEEEEcCCHHHHHHHHHHHHHHh
Confidence 642 2566777777789988876531 1 25679999996 45777777777654
No 151
>PRK05839 hypothetical protein; Provisional
Probab=99.93 E-value=7.2e-24 Score=185.19 Aligned_cols=239 Identities=14% Similarity=0.089 Sum_probs=151.0
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHH
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIA 83 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---~~~l~ 83 (307)
++||.|+++.|+|+.+. ..++..|++++.++.+ +++..+..+ ++++++++++||||||.+++ +++|+
T Consensus 107 ~~gd~vlv~~P~y~~~~----~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~-~~~k~v~i~nP~NPTG~~~s~~~l~~i~ 181 (374)
T PRK05839 107 KQNPTIAYPNPFYQIYE----GAAIASRAKVLLMPLTKENDFTPSLNEKEL-QEVDLVILNSPNNPTGRTLSLEELIEWV 181 (374)
T ss_pred CCCCEEEECCCCchhhH----HHHHhcCCEEEEeecccccCCcCCcchhhh-ccccEEEEeCCCCCcCcccCHHHHHHHH
Confidence 58999999999998887 5567889999999874 122222222 46899999999999999997 77888
Q ss_pred HHHHHcCCEEEEeCccCCCC----cCCc---------cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH
Q 021783 84 EMAHAHGALLLVDNSIMSPV----LSRP---------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 150 (307)
Q Consensus 84 ~~~~~~~~~li~D~a~~~~~----~~~~---------~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~ 150 (307)
++|+++|+++|+|++|+.-. .+.. ...+..++++||||.+ +.+|+|+||++++++ +.+.+.....
T Consensus 182 ~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~-~~~GlRiG~ii~~~~-~~~~~~~~~~ 259 (374)
T PRK05839 182 KLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRS-SAPGLRSGFIAGDAS-ILKKYKAYRT 259 (374)
T ss_pred HHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEecccccc-CCccceeEEEecCHH-HHHHHHHHHh
Confidence 88999999999999987321 1111 1235789999999998 678999999998744 5455544443
Q ss_pred hcCCCCChhhHHHHhhccc---cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEe
Q 021783 151 AEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 227 (307)
Q Consensus 151 ~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 227 (307)
..+...+...+..+...+. .++...+...++.+.+.+.+ +.. . ...+.++++++
T Consensus 260 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l------------~~~----------~-p~gg~fi~~~~ 316 (374)
T PRK05839 260 YLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL------------GIT----------I-PPATFYVWLPV 316 (374)
T ss_pred hcCCCCChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc------------CCC----------C-CCeeEEEEEeC
Confidence 3332333333333333322 12222222223222222221 000 1 12467778887
Q ss_pred CCHHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHH
Q 021783 228 GSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKAL 302 (307)
Q Consensus 228 ~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l 302 (307)
++ ..++.+++. .+||.+.+|..|.. .+..++++|||++. +++++.+++|.+.+
T Consensus 317 ~~---~~~~~~~l~~~~gi~v~pg~~f~~-------------------~~~~~~~iRis~~~~~~~~~~~l~~l~~~l 372 (374)
T PRK05839 317 DN---DEEFTKKLYQNEGIKVLPGSFLGR-------------------NGIGKGYVRIALVYDTPKLEKALEIIKTYL 372 (374)
T ss_pred CC---hHHHHHHHHHHCCEEEeCchhhCC-------------------CCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 63 345666664 48999998875321 12236789999985 34444555555544
No 152
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.93 E-value=2.4e-24 Score=187.49 Aligned_cols=250 Identities=15% Similarity=0.135 Sum_probs=165.4
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----------ChHHHHhhcCCCceEEEEeCCCCC
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----------DLDEVASAIGPWTKLVWVESPTNP 72 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----------d~~~l~~~l~~~~~~v~~~~~~n~ 72 (307)
++..+...+.+||+|++++|+|+.+. ..++..|++++.++.+ +++++++.. ++++++++++||||
T Consensus 86 ~i~~~~~~l~~g~~vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NP 160 (360)
T PRK07392 86 LLTWAGRELAQLRAVYLITPAFGDYR----RALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNP 160 (360)
T ss_pred HHHHHHHHhCCCCeEEEECCCcHHHH----HHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCC
Confidence 34333333457899999999998888 6677899999999874 234444432 46899999999999
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCccCCCCc----C----CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHH
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSIMSPVL----S----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 144 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~----~----~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~ 144 (307)
||.+++.++|.++++++++ +|+|++|..... . .....+..++++||||.+ +.+|+|+||++++++.+ +.
T Consensus 161 TG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~-~l~GlRiG~~v~~~~~~-~~ 237 (360)
T PRK07392 161 TGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFY-SLPGLRLGYAIAHPDRL-QR 237 (360)
T ss_pred CCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhh-cCCchheeeeeCCHHHH-HH
Confidence 9999999999999999985 666999863221 1 112335689999999999 77899999999975543 33
Q ss_pred HHHHHHhcCCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 145 LYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
+.... .....+...+..+...++.- ....+...++.+.+.+.|++.+++ .++ .+.+.
T Consensus 238 ~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~--------------~~~----~~~~~ 297 (360)
T PRK07392 238 WQQWR--DPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGL--------------TPL----PSAAN 297 (360)
T ss_pred HHhhC--CCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCc--------------EEC----CCCCC
Confidence 43322 12234555566655555431 111223344455555556543221 111 12356
Q ss_pred eEEEEeCCHHHHHHHHhc-CCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHH
Q 021783 222 VLSFLTGSLALSKHVVET-TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLD 299 (307)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~-l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~ 299 (307)
+++++++. ...++.+. ++..||.+.+|..|.. ..++++||+++. ++.+++.+.|.
T Consensus 298 fl~~~~~~--~~~~l~~~ll~~~gv~v~pg~~f~~---------------------~~~~~iRi~~~~~~~~~~l~~al~ 354 (360)
T PRK07392 298 FLLVQSQG--SALQLQEKLLQQHRILIRDCLSFPE---------------------LGDRYFRVAVRTEAENQRLLEALA 354 (360)
T ss_pred EEEEEcCC--CHHHHHHHHHhhCCEEEEeCCCCCC---------------------CCCCEEEEEeCCHHHHHHHHHHHH
Confidence 77777653 35666666 4667999998876321 135789999987 44678888887
Q ss_pred HHHh
Q 021783 300 KALR 303 (307)
Q Consensus 300 ~~l~ 303 (307)
+.++
T Consensus 355 ~~~~ 358 (360)
T PRK07392 355 AILA 358 (360)
T ss_pred HHhh
Confidence 7664
No 153
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.93 E-value=7.2e-24 Score=184.83 Aligned_cols=234 Identities=21% Similarity=0.237 Sum_probs=152.2
Q ss_pred HHHHH-HHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc--
Q 021783 3 ALAAV-THL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD-- 78 (307)
Q Consensus 3 al~~~-~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~-- 78 (307)
++..+ ..+ +++||+|++++|+|+.+. ..++..|++++.++ ++++++. ++++++++++|+||||.+++
T Consensus 98 ~i~~~~~~l~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~--~~~~l~~---~~~~~v~~~~p~NPtG~~~~~~ 168 (364)
T PRK07865 98 LVAWLPTLLGLGPGDVVVIPELAYPTYE----VGARLAGATVVRAD--SLTELGP---QRPALIWLNSPSNPTGRVLGVD 168 (364)
T ss_pred HHHHHHHHHcCCCCCEEEECCCCcccHH----HHHHhcCCEEEecC--ChhhCCc---ccceEEEEcCCCCCCCccCCHH
Confidence 44333 345 689999999999998887 55677899988875 3444432 67899999999999999986
Q ss_pred -HHHHHHHHHHcCCEEEEeCccCCCCcC----C---c----cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH
Q 021783 79 -IRKIAEMAHAHGALLLVDNSIMSPVLS----R---P----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 146 (307)
Q Consensus 79 -~~~l~~~~~~~~~~li~D~a~~~~~~~----~---~----~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~ 146 (307)
+++|.++|+++|+++|+|++|+..... . . ...+..++++||||.+ +.+|+|+||++++++ +.+.+.
T Consensus 169 ~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~GlRiG~i~~~~~-~~~~~~ 246 (364)
T PRK07865 169 HLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQS-NLAGYRAGFVAGDPA-LVAELL 246 (364)
T ss_pred HHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhcc-CCCceeeEEEecCHH-HHHHHH
Confidence 678889999999999999999732211 0 1 1234679999999999 568999999988744 555555
Q ss_pred HHHHhcCCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceE
Q 021783 147 FLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 223 (307)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 223 (307)
......+...+...+..+...++. +....+...++.+.+.+.|++.. +. +. .+. .+.++
T Consensus 247 ~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~------~~--~~~-~~~~~ 308 (364)
T PRK07865 247 EVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAAG---------FR------VD--HSE-AGLYL 308 (364)
T ss_pred HHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcC---------Cc------cc--CCC-ccEEE
Confidence 444433333444444444444432 22233344455555556565421 10 00 111 23355
Q ss_pred EEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 224 SFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 224 ~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
++.++. ....+.+.+.++||.+.+|..|.. ..++++||+++.
T Consensus 309 ~~~~~~--~~~~~~~~l~~~gv~v~pg~~f~~---------------------~~~~~iRi~~~~ 350 (364)
T PRK07865 309 WATRGE--DCWDTVAWLAERGILVAPGDFYGP---------------------AGAQHVRVALTA 350 (364)
T ss_pred EEeCCC--CHHHHHHHHHHCCEEEeCccccCc---------------------CCCCEEEEEecC
Confidence 555532 245566777788999988775321 024689999975
No 154
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=2.4e-24 Score=185.48 Aligned_cols=240 Identities=17% Similarity=0.152 Sum_probs=159.5
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHH
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKI 82 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l 82 (307)
++.++..++++|| |++++|+|+.+. ..++..|++++.++.++ +. +...++++++++||||||.+++.+++
T Consensus 83 ~i~~l~~~~~~g~-v~v~~P~y~~y~----~~~~~~g~~~~~v~~~~-~~----~~~~~~~v~l~nPnNPTG~~~s~~~l 152 (339)
T PRK06959 83 AIRALPALLPRGR-VGIAPLAYSEYA----PAFARHGHRVVPLDEAA-DT----LPAALTHLIVVNPNNPTAERLPAARL 152 (339)
T ss_pred HHHHHHHhcCCCe-EEEcCCCcHHHH----HHHHHCCCEEEeecccc-hh----ccccCCEEEEeCCCCCCCCCCCHHHH
Confidence 3444455678887 889999998888 66778899999988754 22 33456789999999999999986666
Q ss_pred HHH---HHHcCCEEEEeCccCCCCc-C---CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCC
Q 021783 83 AEM---AHAHGALLLVDNSIMSPVL-S---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 155 (307)
Q Consensus 83 ~~~---~~~~~~~li~D~a~~~~~~-~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~ 155 (307)
.++ |++++.++|+||+|..... + .....+..++++||||.+ |.+|+|+||++++++ +.+.+...... ..
T Consensus 153 ~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~-gl~GlRiGy~v~~~~-li~~l~~~~~~--~~ 228 (339)
T PRK06959 153 LRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFF-GLAGVRAGFVLAAPA-LLAALRDALGA--WT 228 (339)
T ss_pred HHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhc-CCcchheEEEecCHH-HHHHHHHhcCC--CC
Confidence 555 5678999999999975332 1 111234579999999999 778999999999754 54555444322 12
Q ss_pred CChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHH
Q 021783 156 LAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLAL 232 (307)
Q Consensus 156 ~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (307)
.+...+..+...++. .+...+.+.+..+.+.+.|++.. +. +. ..+.++++.++ .
T Consensus 229 vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g---------~~------~~-----~~~~f~~~~~~---~ 285 (339)
T PRK06959 229 VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAHG---------FA------VH-----ATPLFSWTDDP---R 285 (339)
T ss_pred CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC---------CC------cc-----CcceEEEEeCC---C
Confidence 334445555555432 22233444555566666666431 10 00 02345566654 2
Q ss_pred HHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec-c-CChHHHHHHHHHHHhcC
Q 021783 233 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-I-EDVNDLISDLDKALRTG 305 (307)
Q Consensus 233 ~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~-~-~~~~~~i~~l~~~l~~~ 305 (307)
..++.+.|..+||.++... ..+++|||++ . ++.+++++.|++.++.+
T Consensus 286 ~~~l~~~l~~~GI~vr~~~--------------------------~~~~lRisi~~~~~e~~~l~~al~~~~~~~ 334 (339)
T PRK06959 286 AAALHAALARRGIWTRYFA--------------------------PPPSVRFGLPADEAEWQRLEDALAECVPTL 334 (339)
T ss_pred HHHHHHHHHhCCeEEEECC--------------------------CCCeEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 5678888888999886311 1346999994 4 77889999888877543
No 155
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.93 E-value=1.2e-23 Score=183.46 Aligned_cols=251 Identities=17% Similarity=0.158 Sum_probs=171.8
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCC----CceEEEEeCCCCCccccccH
Q 021783 4 LAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP----WTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 4 l~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~----~~~~v~~~~~~n~tG~~~~~ 79 (307)
+.++.+++++||+|++++|.|+++. ..++..|++++.++..|++++++.++. +++++++++++|++|...++
T Consensus 90 ~~~l~~~~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~ 165 (360)
T TIGR00858 90 VGVISALVGKGDLILSDALNHASLI----DGCRLSGARVRRYRHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPL 165 (360)
T ss_pred HHHHHHhCCCCCEEEEEccccHHHH----HHHHhcCCceEEecCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCH
Confidence 3455667899999999999998887 445678999999988899999988863 57888989999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcC-C---------ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH-
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLS-R---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL- 148 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~-~---------~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~- 148 (307)
++|.++|+++|+++|+|++|+.+.+. . ....+.+++++|+||+++ ++ +|+++++++ +.+.+...
T Consensus 166 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~---gG~~~~~~~-~~~~~~~~~ 240 (360)
T TIGR00858 166 PQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALG-SY---GAYVAGSQA-LIDYLINRA 240 (360)
T ss_pred HHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhh-cc---CcEEEcCHH-HHHHHHHhC
Confidence 99999999999999999999865432 1 112368999999999994 44 488888755 33333222
Q ss_pred HHhc-CCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 149 QNAE-GSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 149 ~~~~-~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
.... ....++........+++. .....++..++.+.+.+.|++.. + .-. ...+++++
T Consensus 241 ~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~--------~~~----------~~~~~~~~ 301 (360)
T TIGR00858 241 RTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG-F--------TLM----------PSCTPIVP 301 (360)
T ss_pred ccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC-C--------ccC----------CCCCCEEE
Confidence 2221 222333333333333332 22344556666677777776532 1 000 11366888
Q ss_pred EEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHH
Q 021783 225 FLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 302 (307)
Q Consensus 225 ~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l 302 (307)
+.++......++.+.|.++||.++.+..+.. ...++++|+|++....++.++.+.+.|
T Consensus 302 ~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~--------------------~~~~~~iRis~~~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 302 VIIGDNASALALAEELQQQGIFVGAIRPPTV--------------------PAGTSRLRLTLSAAHTPGDIDRLAEAL 359 (360)
T ss_pred EEeCCHHHHHHHHHHHHHCCeeEeeeCCCCC--------------------CCCCceEEEEEcCCCCHHHHHHHHHhh
Confidence 8886544477888888888998876443110 012457999999866677777666655
No 156
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.5e-24 Score=188.60 Aligned_cols=244 Identities=18% Similarity=0.213 Sum_probs=156.9
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcccccc
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 78 (307)
++.++++|||+|++++|+|+.+. ..+...|++++.++.+ +.+++.+.. ++++++++++|+||||.+++
T Consensus 98 ~~~~~~~~gd~V~v~~P~y~~~~----~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s 172 (357)
T PRK14809 98 LARAMLDPGDTVLVPDPGFAYYG----MSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIP 172 (357)
T ss_pred HHHHhcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCC
Confidence 44557899999999999997555 3455678888777652 345555554 46899999999999999999
Q ss_pred HHHHHHHHHHc--CCEEEEeCccCCCCcC-----CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh
Q 021783 79 IRKIAEMAHAH--GALLLVDNSIMSPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 151 (307)
Q Consensus 79 ~~~l~~~~~~~--~~~li~D~a~~~~~~~-----~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~ 151 (307)
.+++.++++.. ++++|+|++|..-... .....+..++++||||.+ +.+|+|+||++++++ +.+.+.....
T Consensus 173 ~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~~~GlRiG~~~~~~~-~~~~~~~~~~- 249 (357)
T PRK14809 173 LDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAY-GLAGLRLGYAVVPEE-WADAYARVNT- 249 (357)
T ss_pred HHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHh-cCcchhheeeecCHH-HHHHHHHhCC-
Confidence 87777777654 7899999999732211 112235689999999999 678999999999865 4344433321
Q ss_pred cCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHH
Q 021783 152 EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 231 (307)
Q Consensus 152 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (307)
....+...+..+...+.. ....++..+..+..++.+.+. +... .+ ...+.++++++.+
T Consensus 250 -~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~----------L~~~----~~----~~~g~f~~~~~~~-- 307 (357)
T PRK14809 250 -PFAASELACRAGLAALDD-DEHVERTVETARWAREYIREE----------LDAP----TW----ESAGNFVLAEVGD-- 307 (357)
T ss_pred -CCCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHH----------hcCc----cC----CCCCCEEEEECCC--
Confidence 223444555555555533 112222222222222222211 1000 00 1246777887752
Q ss_pred HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHh
Q 021783 232 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 303 (307)
Q Consensus 232 ~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~ 303 (307)
..++.+.+.++||.+..|..|. .++++||+++. +++++.++.|.++++
T Consensus 308 -~~~~~~~l~~~gv~v~~g~~f~-----------------------~~~~iRls~~~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 308 -ASAVAEAAQERGVIVRDCTSFG-----------------------LPECIRITCGTREETERAVEVLNEVLA 356 (357)
T ss_pred -HHHHHHHHHHCCEEEEECccCC-----------------------CCCeEEEecCCHHHHHHHHHHHHHHhc
Confidence 4567777778899999887632 13579999974 677777777777664
No 157
>PRK14012 cysteine desulfurase; Provisional
Probab=99.93 E-value=4.9e-24 Score=188.28 Aligned_cols=126 Identities=22% Similarity=0.262 Sum_probs=110.4
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
.++||+|++++++|+++...+..+ +..|++++.++.+ |+++++++++++++++++++++|+||.+.|+++|.++
T Consensus 91 ~~~gd~Vi~~~~~~~s~~~~~~~~-~~~g~~~~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~l 169 (404)
T PRK14012 91 QKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLDPQSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEI 169 (404)
T ss_pred cCCCCEEEEecCccHHHHHHHHHH-HhCCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHH
Confidence 478999999999998887666543 4569999998764 8899999999999999999999999999999999999
Q ss_pred HHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChh
Q 021783 86 AHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER 140 (307)
Q Consensus 86 ~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~ 140 (307)
|+++|+++|+|++|+.|..+ +....++|++++|+||.+ ||.| .|+++++++.
T Consensus 170 a~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~-gp~g--~G~l~~~~~~ 222 (404)
T PRK14012 170 CRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIY-GPKG--IGALYVRRKP 222 (404)
T ss_pred HHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhcc-CCCc--eEEEEEecCC
Confidence 99999999999999998876 666778999999999977 6766 7888887654
No 158
>PLN02231 alanine transaminase
Probab=99.93 E-value=2.7e-24 Score=193.89 Aligned_cols=259 Identities=15% Similarity=0.124 Sum_probs=162.7
Q ss_pred HHH-HHHHhc-CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCC------CceEEEEe
Q 021783 3 ALA-AVTHLL-GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGP------WTKLVWVE 67 (307)
Q Consensus 3 al~-~~~~~~-~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~------~~~~v~~~ 67 (307)
|+. ++..++ .+||+|+++.|.|+.+. ..++..|++++.++++ |+++|++.++. ++++++++
T Consensus 203 ai~~~~~~l~~~~gd~Vli~~P~Y~~y~----~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~ 278 (534)
T PLN02231 203 AVHMMMQLLIRSEKDGILCPIPQYPLYS----ASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVI 278 (534)
T ss_pred HHHHHHHHhccCCCCEEEEeCCCChhHH----HHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEe
Confidence 453 334456 47999999999999888 6667889999998763 68899888753 68999999
Q ss_pred CCCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC------Ccc----------CCCccEEEeccccccccCCC
Q 021783 68 SPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS------RPL----------ELGADIVMHSATKFIAGHSD 128 (307)
Q Consensus 68 ~~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~------~~~----------~~~~d~~~~s~~K~~~g~~g 128 (307)
+|+||||.+++ +++|+++|++||++||+|++|..-.+. ... .....+++.|+||.+.|.+|
T Consensus 279 nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pG 358 (534)
T PLN02231 279 NPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECG 358 (534)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCc
Confidence 99999999996 889999999999999999999743221 110 01136889999997767789
Q ss_pred ceeEEEEEc--ChhHHHHHHHHHHhcCCCCChhhHHHHhhccc-------cHHH-------HHHHHHHHHHHHHHHHhcC
Q 021783 129 VMAGVLAVK--GERLAKELYFLQNAEGSGLAPFDCWICLRGVK-------TMAL-------RVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 129 ~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~~~-------~~~~~~~~~~~l~~~l~~~ 192 (307)
+|+||+.+. ++.+.+.+........ ..+...+.++...++ .+.. ..+.+.++.+.+.+.|+..
T Consensus 359 lRiGy~~~~~~~~~l~~~l~k~~~~~~-~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~ 437 (534)
T PLN02231 359 KRGGYMEVTGFTSDVREQIYKVASVNL-CSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSL 437 (534)
T ss_pred cceEEEEEecCCHHHHHHHHHHHhhhc-CCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999873 4556555544443222 122233333333331 1211 1233444555555555543
Q ss_pred CCccEEecCCCCCCCchHHHhhhccCCCceEEE-Ee--CCH--HH--------HHHHHh-cCCcceeecCCCCccceeec
Q 021783 193 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LT--GSL--AL--------SKHVVE-TTKYFSITVSFGSVKSLISM 258 (307)
Q Consensus 193 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~--~~~--~~--------~~~~~~-~l~~~gi~v~~g~~~~~~~~ 258 (307)
+ ++... .+ .|+++.| ++ +.. +. ...+.. .+...||.+.+|..|...
T Consensus 438 ~--------------gi~~~--~p--~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~-- 497 (534)
T PLN02231 438 E--------------GVTCN--KA--EGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQV-- 497 (534)
T ss_pred C--------------Cceec--CC--CeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCC--
Confidence 2 21111 11 3455554 33 211 10 112223 345679999999875310
Q ss_pred ccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 021783 259 PCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 304 (307)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 304 (307)
.+..++|+++.. +.+++.+++|.+++++
T Consensus 498 ------------------~g~~~~Rit~~~~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 498 ------------------PGTWHFRCTILPQEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred ------------------CCCCeEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 124569999964 5666667777776643
No 159
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.93 E-value=1.3e-23 Score=182.52 Aligned_cols=254 Identities=18% Similarity=0.156 Sum_probs=168.0
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC-----CCceEEEEeCCCCCccccccH
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-----PWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~~ 79 (307)
+++.+++++||+|++++|.|+++. ..++..|++++.++..|++++++.++ ++++++++++++||||...|+
T Consensus 76 ~~~~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~ 151 (349)
T cd06454 76 GVLSTLAGKGDLIISDSLNHASII----DGIRLSGAKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPL 151 (349)
T ss_pred HHHHHhcCCCCEEEEehhhhHHHH----HHHHHcCCceEEecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCH
Confidence 456667899999999999998877 44566899999888888888888886 357888888999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcC---------CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH-
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLS---------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ- 149 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~- 149 (307)
++|.++|+++|+++|+|++|+.+... .....+.|++++|+||+++ ++ +|+++.+++.. +.+....
T Consensus 152 ~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~---gG~i~~~~~~~-~~~~~~~~ 226 (349)
T cd06454 152 PELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFG-AV---GGYIAGSKELI-DYLRSYAR 226 (349)
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhc-cc---CCEEECCHHHH-HHHHHhch
Confidence 99999999999999999999865432 1234578999999999995 44 58888775533 3333222
Q ss_pred Hh-cCCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEE
Q 021783 150 NA-EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 225 (307)
Q Consensus 150 ~~-~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 225 (307)
.. .+..........+...++.. ....+++.++.+.+.+.+.+.. +... . ...+.++++
T Consensus 227 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g---------~~~~------~---~~~~~~~~~ 288 (349)
T cd06454 227 GFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKELG---------FPVG------G---SPSHIIPPL 288 (349)
T ss_pred hhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC---------Cccc------C---CCCCcEEEE
Confidence 12 12233333333333444332 3344555666666666665431 1000 0 112333444
Q ss_pred EeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 226 LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 226 ~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
.+.+.....++.+.|..+||.++.+.... .....+++|++++....++.++.+.+.|+++
T Consensus 289 ~~~~~~~~~~~~~~L~~~gI~~~~~~~~~--------------------~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 289 IGDDPAKAVAFSDALLERGIYVQAIRYPT--------------------VPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred eCCChHHHHHHHHHHHhCCceEEEecCCc--------------------cCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 44433346788888887899877543200 0012467999998766677777777776654
No 160
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.92 E-value=2.7e-24 Score=187.90 Aligned_cols=260 Identities=18% Similarity=0.177 Sum_probs=173.4
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC--CCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG--PWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~--~~~~~v~~~~~~n~tG 74 (307)
++ .++.+++.+||+|+++++.+++.. +...++..|++++.++.+ |++++++.++ ++++++++++++||||
T Consensus 68 ~l~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG 145 (368)
T PRK13479 68 SVEAAIGSLVPRDGKVLVPDNGAYGAR--IAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTG 145 (368)
T ss_pred HHHHHHHhccCCCCeEEEEeCCchHHH--HHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccc
Confidence 44 455667889999999887765553 235677889999999873 6899999886 4567899999999999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH---
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--- 150 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~--- 150 (307)
...|+++|.++|+++|+++++|++|+.+..+ +...++.|++++|+||+++|++| .|+++++++.+.. +.....
T Consensus 146 ~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~-~~~~~~~~~ 222 (368)
T PRK13479 146 ILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPG--FGFVIARRSELEA-CKGNSRSLS 222 (368)
T ss_pred cccCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCccccccCCC--ceEEEECHHHHHH-hhcCCCCee
Confidence 9999999999999999999999998887655 56667899999999999988888 7999998664433 221100
Q ss_pred --------------hcCCCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchH
Q 021783 151 --------------AEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 210 (307)
Q Consensus 151 --------------~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~ 210 (307)
....+.+....+....+++. ++.+.+++.+..+.+.+.+++.. + .
T Consensus 223 ~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~--------~------ 287 (368)
T PRK13479 223 LDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALG-F--------E------ 287 (368)
T ss_pred ecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-C--------c------
Confidence 00011221121222222221 23334555556666666665441 1 0
Q ss_pred HHhhhccCCCceEEEEeCCH--HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe-c
Q 021783 211 LHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-G 287 (307)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~ 287 (307)
++.++....+.++.|.+... .+...+.+.|..+||.++.|..+ ..+++|+|. +
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~------------------------~~~~iRis~~~ 343 (368)
T PRK13479 288 PLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLT------------------------QVDTFRIGCIG 343 (368)
T ss_pred ccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCC------------------------CCCEEEEecCC
Confidence 10000001123455555322 23678888898899998766431 134699986 5
Q ss_pred ---cCChHHHHHHHHHHHhcCC
Q 021783 288 ---IEDVNDLISDLDKALRTGP 306 (307)
Q Consensus 288 ---~~~~~~~i~~l~~~l~~~~ 306 (307)
.++++++++.|.+.+++++
T Consensus 344 ~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 344 DVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred CCCHHHHHHHHHHHHHHHHHcC
Confidence 2788888888888887654
No 161
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.92 E-value=2.2e-23 Score=184.13 Aligned_cols=255 Identities=15% Similarity=0.132 Sum_probs=168.9
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC----C--CceEEEEeCCCCCcccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----P--WTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~----~--~~~~v~~~~~~n~tG~~~~ 78 (307)
.++.++++|||+|++++|.|+++. ..++..|++++.++..|++++++.++ + ++++|++.+++|++|...+
T Consensus 117 ~~~~~l~~~gd~vi~~~~~~~~~~----~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~ 192 (397)
T PRK06939 117 GLFETLLGKEDAIISDALNHASII----DGVRLCKAKRYRYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP 192 (397)
T ss_pred HHHHHhCCCCCEEEEEhhhhHHHH----HHHHhcCCceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC
Confidence 556668899999999999998887 44566788888888889998888775 2 7788888889999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcCC---------ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~~---------~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
+++|.++|++||+++|+|++|+.+.... ....+.|++++|+||+++|+ ++||++++++ +.+.+....
T Consensus 193 ~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~---r~G~v~~~~~-~~~~l~~~~ 268 (397)
T PRK06939 193 LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA---SGGYTAGRKE-VIDWLRQRS 268 (397)
T ss_pred HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc---CceEEEeCHH-HHHHHHHhC
Confidence 9999999999999999999997554321 11125789999999999543 4899998855 444343321
Q ss_pred H-h-cCCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 150 N-A-EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 150 ~-~-~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
. . .+....+..+..+..+++.+ ....++..++.+.+.+.|+... ++.. ...++++.
T Consensus 269 ~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~---------~~~~----------~~~~~~~~ 329 (397)
T PRK06939 269 RPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAAG---------FTLG----------PGEHPIIP 329 (397)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC---------CCcC----------CCCCCEEE
Confidence 1 1 12222222233333333222 2334455555566666665431 1101 11245565
Q ss_pred EEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHH
Q 021783 225 FLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDK 300 (307)
Q Consensus 225 ~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~ 300 (307)
+.+.+.....++.+.|..+||.+..+. +.. .+.+.+++|++++. +++++.++.|.+
T Consensus 330 ~~~~~~~~~~~~~~~L~~~gI~v~~~~-~~~-------------------~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~ 389 (397)
T PRK06939 330 VMLGDAKLAQEFADRLLEEGVYVIGFS-FPV-------------------VPKGQARIRTQMSAAHTKEQLDRAIDAFEK 389 (397)
T ss_pred EEECCHHHHHHHHHHHHHCCceEeeeC-CCC-------------------CCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 566544446788888888899877422 110 01124579999865 778888888888
Q ss_pred HHhcCC
Q 021783 301 ALRTGP 306 (307)
Q Consensus 301 ~l~~~~ 306 (307)
++++.+
T Consensus 390 ~~~~~~ 395 (397)
T PRK06939 390 VGKELG 395 (397)
T ss_pred HHHHhC
Confidence 887765
No 162
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.92 E-value=2e-23 Score=181.40 Aligned_cols=227 Identities=19% Similarity=0.216 Sum_probs=148.7
Q ss_pred Hh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHH
Q 021783 9 HL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAE 84 (307)
Q Consensus 9 ~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---~~~l~~ 84 (307)
.+ +++||+|++++|+|+.+. ..++..|++++.++ +++++. .++++++++++|+||||.+++ +++|.+
T Consensus 99 ~l~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~--~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~ 169 (357)
T TIGR03539 99 LLGLGPGDTVVIPELAYPTYE----VGALLAGATPVAAD--DPTELD---PVGPDLIWLNSPGNPTGRVLSVDELRAIVA 169 (357)
T ss_pred HHcCCCCCEEEECCCCcHHHH----HHHHhcCCEEeccC--ChhhcC---ccCccEEEEeCCCCCcCccCCHHHHHHHHH
Confidence 34 689999999999998777 44567899988775 444332 357899999999999999996 778999
Q ss_pred HHHHcCCEEEEeCccCCCC-----cC--Cc----cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcC
Q 021783 85 MAHAHGALLLVDNSIMSPV-----LS--RP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 153 (307)
Q Consensus 85 ~~~~~~~~li~D~a~~~~~-----~~--~~----~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~ 153 (307)
+|+++|+++|+|++|..-. .. .+ ...+..++++||||.+ +.+|+|+||++++++ +.+.+.......+
T Consensus 170 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~~G~R~G~~i~~~~-~~~~~~~~~~~~~ 247 (357)
T TIGR03539 170 WARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRS-NLAGYRAGFVAGDPA-LVAELLTVRKHAG 247 (357)
T ss_pred HHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEecccccc-CCCceeEEEEecCHH-HHHHHHHHHhhcc
Confidence 9999999999999996311 11 11 1224579999999999 568999999997744 5455554444333
Q ss_pred CCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc-eEEEEeCC
Q 021783 154 SGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGS 229 (307)
Q Consensus 154 ~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~ 229 (307)
...+...+..+...++. +....+.+.++.+.+.+.+++.. +.-. .+ .++ ++++.++.
T Consensus 248 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~g---------~~~~--------~p--~~~~~~~~~~~~ 308 (357)
T TIGR03539 248 LMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKAG---------FRID--------HS--EAGLYLWATRGE 308 (357)
T ss_pred cCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcC---------CCCc--------CC--CccEEEEEECCC
Confidence 33444445544455532 22223333444455555555321 1100 11 244 44444432
Q ss_pred HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 230 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 230 ~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
....+.+.+.+.||.+.+|..|.. ..++++|||++.
T Consensus 309 --~~~~~~~~l~~~gV~v~pg~~f~~---------------------~~~~~iRis~~~ 344 (357)
T TIGR03539 309 --DAWDTVDRLAELGILVAPGDFYGP---------------------AGSQHVRVALTA 344 (357)
T ss_pred --CHHHHHHHHHhCCEEECCccccCC---------------------CCCCeEEEEecC
Confidence 356677778888999988775321 025689999986
No 163
>PRK07179 hypothetical protein; Provisional
Probab=99.92 E-value=2.7e-23 Score=183.70 Aligned_cols=253 Identities=17% Similarity=0.159 Sum_probs=170.5
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCC-CceEEEEeCCCCCccccccHHHHH
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIA 83 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~~~~l~ 83 (307)
.++.++.++||.|+++.++|.+.. ..++..|++++.++.+|++++++.+++ ++++|++++++||+|.+.|+++|.
T Consensus 129 ~~l~~l~~~g~~v~~~~~~h~s~~----~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~ 204 (407)
T PRK07179 129 GLLQTIADPNTPVYIDFFAHMSLW----EGVRAAGAQAHPFRHNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIV 204 (407)
T ss_pred HHHHHhCCCCCEEEEECCcCHHHH----HHHHHCCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHH
Confidence 566678889999999999998776 445567889888888899999999975 588999999999999999999999
Q ss_pred HHHHHcCCEEEEeCccCCCCcC-C----ccC----CCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH--hc
Q 021783 84 EMAHAHGALLLVDNSIMSPVLS-R----PLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AE 152 (307)
Q Consensus 84 ~~~~~~~~~li~D~a~~~~~~~-~----~~~----~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~--~~ 152 (307)
++|+++|+++|+|++|+.|... . ... .++|++++|+||++++ + +|+++++++ +.+.+..... ..
T Consensus 205 ~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~-~---~G~l~~~~~-~~~~~~~~~~~~~~ 279 (407)
T PRK07179 205 DIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG-R---AGIITCPRE-LAEYVPFVSYPAIF 279 (407)
T ss_pred HHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc-c---CeEEEeCHH-HHHHHHHhCcCeee
Confidence 9999999999999999865431 1 111 2469999999999953 2 899998754 4343332221 12
Q ss_pred CCCCChhhHHHHhhccc---cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC
Q 021783 153 GSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 229 (307)
Q Consensus 153 ~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (307)
+++..+.........++ ....+.+++.++.+.+.+.|++.. + .. .+.++++++.+++
T Consensus 280 ~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~-----~v--------------~~~~~i~~l~~~~ 339 (407)
T PRK07179 280 SSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSELG-Y-----NI--------------RSESQIIALETGS 339 (407)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-C-----CC--------------CCCCCEEEEEeCC
Confidence 22333322222222232 223345566666677777776431 1 00 1135678888765
Q ss_pred HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 230 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 230 ~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
......+.+.|.++||.++. .+.|.. ...++++|||++. ++++++++.|.+++++.
T Consensus 340 ~~~~~~~~~~L~~~GI~~~~------~~~p~~--------------~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 340 ERNTEVLRDALEERNVFGAV------FCAPAT--------------PKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred HHHHHHHHHHHHHCCceEee------ecCCCC--------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 44567788888888886431 122211 1124679999986 66666677776666654
Q ss_pred C
Q 021783 306 P 306 (307)
Q Consensus 306 ~ 306 (307)
+
T Consensus 400 ~ 400 (407)
T PRK07179 400 D 400 (407)
T ss_pred C
Confidence 4
No 164
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.92 E-value=2.5e-23 Score=177.64 Aligned_cols=257 Identities=21% Similarity=0.201 Sum_probs=190.8
Q ss_pred CcHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCC------CceEEEEeCCCCCcc
Q 021783 1 MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLVWVESPTNPRQ 74 (307)
Q Consensus 1 ~aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG 74 (307)
+|+++++.++++++|.|+.....|.+.. ..++..+++++.+.++|+++|++.+.+ +.++|+++++.++.|
T Consensus 110 ~AN~~~i~~l~~~~dli~~D~lnHASii----dG~rls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdG 185 (388)
T COG0156 110 VANLGLLSALLKKGDLIFSDELNHASII----DGIRLSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDG 185 (388)
T ss_pred hhHHHHHHHhcCCCcEEEEechhhhhHH----HHHHhCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCC
Confidence 4677888899999999999999998877 778899999999999999999999974 357888889999999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccCCCCcC-Ccc---------CCCccEEEeccccccccCCCceeEEEEEcChhHHHH
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPL---------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 144 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~---------~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~ 144 (307)
.+.|+++|.+++++|++++++|++|+.|.+. ... ...+|++++|++|.+++ . +|++.++.. +.+.
T Consensus 186 diApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs-~---Gg~v~g~~~-~~d~ 260 (388)
T COG0156 186 DIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGS-S---GGYIAGSAA-LIDY 260 (388)
T ss_pred CcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcc-c---CceeeCcHH-HHHH
Confidence 9999999999999999999999999987654 111 12358999999999953 3 788888855 5444
Q ss_pred HHHH-HHh-cCCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 145 LYFL-QNA-EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 145 ~~~~-~~~-~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
+... ... ....+++..+.....+++.+ ..+.+++.++...+.+.++... +... ...
T Consensus 261 L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~~---------~~~~----------~s~ 321 (388)
T COG0156 261 LRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALG---------LVLL----------PSE 321 (388)
T ss_pred HHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---------CccC----------CCC
Confidence 4443 332 23456666655555555443 3445555555555554333221 1101 224
Q ss_pred CceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHH
Q 021783 220 GSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 299 (307)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~ 299 (307)
.+++.+.+.+...+..+.+.|...||.+.. ..+|..+. +...+|++++..+.++.++.+.
T Consensus 322 s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~------i~~PTVp~--------------gtarlRi~lta~ht~~~I~~l~ 381 (388)
T COG0156 322 SPIIPVILGDEERALEASRALLEEGIYVSA------IRPPTVPK--------------GTARLRITLTAAHTEEDIDRLA 381 (388)
T ss_pred CCeeeeEeCCHHHHHHHHHHHHHCCeeEee------ecCCCCCC--------------CcceEEEEecCCCCHHHHHHHH
Confidence 678888998877788888888888998876 33443332 2345999999999999999999
Q ss_pred HHHhcC
Q 021783 300 KALRTG 305 (307)
Q Consensus 300 ~~l~~~ 305 (307)
+++.++
T Consensus 382 ~~l~~~ 387 (388)
T COG0156 382 EALSEV 387 (388)
T ss_pred HHHHhh
Confidence 988764
No 165
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=3.4e-24 Score=187.14 Aligned_cols=245 Identities=14% Similarity=0.153 Sum_probs=164.5
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC-CCceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG-PWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~-~~~~~v~~~~~~n~tG~ 75 (307)
++ .++.++++|||+|+++.|+|+.+. ..++..|.+++.++.+ |++++++++. .+++++++++|+||||.
T Consensus 100 ~l~~~~~~~~~~gd~v~v~~P~y~~~~----~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~ 175 (368)
T PRK03317 100 ILQQLLQAFGGPGRTALGFVPSYSMHP----IIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGT 175 (368)
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHHH----HHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCC
Confidence 44 344457899999999999998877 5567788988888742 7899999886 57899999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccCCCCc---CC----ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIMSPVL---SR----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 148 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~~~~~---~~----~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~ 148 (307)
+++.+++.++++.+++++|+||+|+.... .. ....+..++++||||.+ |.+|+|+||++++++ +.+.+...
T Consensus 176 ~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~-g~~GlRiG~~~~~~~-~~~~l~~~ 253 (368)
T PRK03317 176 ALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAF-AFAGGRLGYLAAAPA-VVDALRLV 253 (368)
T ss_pred CCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhh-ccchhhhhhhhCCHH-HHHHHHhc
Confidence 99999999999999999999999973211 11 11224568999999999 567899999998754 44444433
Q ss_pred HHhcCCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEE
Q 021783 149 QNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 225 (307)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 225 (307)
.. ....+...+..+...++.. ....+++.++.+.+.+.+++.. + . .. ...++++.|
T Consensus 254 ~~--~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~--------~------~~----~~~~~~~~~ 312 (368)
T PRK03317 254 RL--PYHLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLRELG-L--------R------VA----PSDANFVLF 312 (368)
T ss_pred CC--CCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCC-C--------E------eC----CCCCcEEEE
Confidence 21 2234445555555555432 2223333444444445454321 1 0 00 112445544
Q ss_pred -EeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHh
Q 021783 226 -LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 303 (307)
Q Consensus 226 -~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~ 303 (307)
.+. ....+.+.+.++||.++... .++++||+++. ++++++++.|.+.++
T Consensus 313 ~~~~---~~~~~~~~l~~~Gv~v~~~~--------------------------~~~~iRi~~~~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 313 GRFA---DRHAVWQGLLDRGVLIRDVG--------------------------IPGWLRVTIGTPEENDAFLAALAEVLA 363 (368)
T ss_pred eccC---CHHHHHHHHHHCCEEEEeCC--------------------------CCCeEEEecCCHHHHHHHHHHHHHHHH
Confidence 333 25667777777899876421 14579999985 567777777777664
No 166
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.92 E-value=5.5e-24 Score=185.58 Aligned_cols=257 Identities=18% Similarity=0.190 Sum_probs=167.8
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC--CCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG--PWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~--~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++.+||++++..+.+++.. +...++..|++++.++.+ |+++++++++ ++++++.+++++||||
T Consensus 66 al~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG 143 (363)
T TIGR02326 66 AVEAVIGSAVPKDGKLLVVINGAYGAR--IVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTG 143 (363)
T ss_pred HHHHHHHhcCCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCcc
Confidence 45 455567788888776555443332 235567889999988874 7899999887 3567888999999999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH------
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF------ 147 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~------ 147 (307)
...|+++|.++|+++|+++++|++|+.|..+ +...+++|++++|+|||++||+| .|+++++++.+.+....
T Consensus 144 ~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~ 221 (363)
T TIGR02326 144 ILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCIQGVPG--FGFVIARQAELAACKGNARSLSL 221 (363)
T ss_pred ccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCccccccCCc--ceEEEECHHHHHHhhcCCCceee
Confidence 9999999999999999999999999988766 67778999999999999988888 79999987654432110
Q ss_pred --------HHHhcC---CCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchH
Q 021783 148 --------LQNAEG---SGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 210 (307)
Q Consensus 148 --------~~~~~~---~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~ 210 (307)
.....+ .+.+.........+++. ++.+.+++.+....+.+.++... + ....+
T Consensus 222 ~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~--------- 290 (363)
T TIGR02326 222 DLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALG-F-EPLLD--------- 290 (363)
T ss_pred cHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-C-eeccC---------
Confidence 000000 11222222222223322 23344555566666666665441 1 01000
Q ss_pred HHhhhccCCCceEEEEeCCH--HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe-c
Q 021783 211 LHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-G 287 (307)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~ 287 (307)
+....+.+.+|.+++. .....+.+.|+++||.++.|..+ .++++|||+ +
T Consensus 291 ----~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~------------------------~~~~iRi~~~~ 342 (363)
T TIGR02326 291 ----DEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVS------------------------QVDCFRIGNIG 342 (363)
T ss_pred ----cccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCC------------------------CCCEEEEecCC
Confidence 0011233456766542 23667888888889998876531 134699996 4
Q ss_pred c---CChHHHHHHHHHHH
Q 021783 288 I---EDVNDLISDLDKAL 302 (307)
Q Consensus 288 ~---~~~~~~i~~l~~~l 302 (307)
. ++++++++.|.+++
T Consensus 343 ~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 343 EVDAADITRLLTAIGKAM 360 (363)
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 2 66666666666654
No 167
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.92 E-value=8e-24 Score=184.73 Aligned_cols=245 Identities=21% Similarity=0.227 Sum_probs=166.2
Q ss_pred HHHHHHH-h-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-------CChHHHHhhcCC------CceEEEEe
Q 021783 3 ALAAVTH-L-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIGP------WTKLVWVE 67 (307)
Q Consensus 3 al~~~~~-~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~------~~~~v~~~ 67 (307)
++.++.. + .++||+|++++|+|+.+. ..++..|++++.++. .|++++++.+++ ++++++++
T Consensus 80 ~~~~~~~~~~~~~~~~vlv~~P~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~ 155 (363)
T PF00155_consen 80 ALFLLLRLLKINPGDTVLVPDPCYPSYI----EAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLIC 155 (363)
T ss_dssp HHHHHHHHHHSSTTSEEEEEESSSTHHH----HHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEE
T ss_pred chhhhhhcccccccccceecCCcccccc----ccccccCceeeeccccccccccccccccccccccccccccccceeeec
Confidence 3434444 4 569999999999999888 667788999999993 489999998875 67899999
Q ss_pred CCCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCcCCc---------cCCCccEEEeccccccccCCCceeEEEE
Q 021783 68 SPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSRP---------LELGADIVMHSATKFIAGHSDVMAGVLA 135 (307)
Q Consensus 68 ~~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~---------~~~~~d~~~~s~~K~~~g~~g~~~G~~~ 135 (307)
+|+||||..++ +++|+++|++||+++|+|++|+....... ......+++.|+||.+ |.+|+|+|+++
T Consensus 156 ~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~GlRvG~i~ 234 (363)
T PF00155_consen 156 NPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSF-GLPGLRVGYIV 234 (363)
T ss_dssp SSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTT-TSGGGTEEEEE
T ss_pred ccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccc-ccccccccccc
Confidence 99999999987 55566669999999999999985444311 1222369999999999 67899999999
Q ss_pred EcChhHHHHHHHHHHhcCCCCChhhHHHHhhccc-------cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc
Q 021783 136 VKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 208 (307)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 208 (307)
++ +.+.+.+......... +...+..+...+. .++...+.+.++.+.+.+.|++. ++ .+..
T Consensus 235 ~~-~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~-~~~~-------- 301 (363)
T PF00155_consen 235 AP-PELIERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GI-TVLP-------- 301 (363)
T ss_dssp EE-HHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TS-EEEH--------
T ss_pred ch-hhhhhhhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hh-heee--------
Confidence 95 5566666655554433 3333333322221 34455666667777777777654 11 1110
Q ss_pred hHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec
Q 021783 209 HELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG 287 (307)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~ 287 (307)
...+.+++..++.. +..++.++|.++ ||.+.+|..+. . ++++|++++
T Consensus 302 --------~~~~~~~~~~~~~~-~~~~l~~~L~~~~gi~v~pg~~~~----------------------~-~~~iRi~~a 349 (363)
T PF00155_consen 302 --------PEAGFFLWVRLDPN-DAEELAQELLEEYGILVRPGSYFG----------------------V-PGYIRISLA 349 (363)
T ss_dssp --------HSBSSEEEEEESHH-HHHHHHHHHHHHHTEEEEEGGGGT----------------------S-TTEEEEEGG
T ss_pred --------ccCccEEEEEcccc-hHHHHHHHHHHhCCEEEEecCCCC----------------------C-CCEEEEEec
Confidence 11233444445544 477888888777 99998877632 2 567999993
Q ss_pred c---CChHHHHHH
Q 021783 288 I---EDVNDLISD 297 (307)
Q Consensus 288 ~---~~~~~~i~~ 297 (307)
. +++++.+++
T Consensus 350 ~~~~e~~~~~~~~ 362 (363)
T PF00155_consen 350 SHSEEDLEEALER 362 (363)
T ss_dssp CSCHHHHHHHHHH
T ss_pred cCCHHHHHHHHhh
Confidence 3 444444443
No 168
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=2.2e-24 Score=185.77 Aligned_cols=231 Identities=18% Similarity=0.176 Sum_probs=157.5
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH 87 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~ 87 (307)
+||+|+++.|+|+.+. ..++..|++++.++.+ |++++++.+ ++++++++++|+||||.+++.++|.++++
T Consensus 93 ~gd~V~v~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~~i~~ 167 (337)
T PRK03967 93 EGKHIVITPPTFGMYS----FYAKLNGIPVIDVPLKEDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEEEILKVLE 167 (337)
T ss_pred CCCeEEEeCCChHHHH----HHHHHcCCeEEEeecCCCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHHHHh
Confidence 7999999999997655 5567789999998864 567887765 57889999999999999999999999995
Q ss_pred HcCCEEEEeCccCCCCc----CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHH
Q 021783 88 AHGALLLVDNSIMSPVL----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 163 (307)
Q Consensus 88 ~~~~~li~D~a~~~~~~----~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (307)
+++++|+|++|..... ......+..++++||||.+ +.+|+|+||++++++ +.+.+...... ...+...+.+
T Consensus 168 -~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~-~l~GlRiG~iv~~~~-~i~~~~~~~~~--~~~~~~~q~~ 242 (337)
T PRK03967 168 -TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAF-GLAGIRAGYAIANEE-IIDALYRIKPP--FSLNILTMKI 242 (337)
T ss_pred -cCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhh-cchhhhheeeecCHH-HHHHHHhhcCC--CCCCHHHHHH
Confidence 7999999999973211 1112234689999999999 778999999999754 44444443322 2334455555
Q ss_pred Hhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcC
Q 021783 164 CLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT 240 (307)
Q Consensus 164 ~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (307)
+...++. +....+...++.+.+.+.|... . . ...+.+++++++ +.+.|
T Consensus 243 ~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~---------~---~----------~~~~~~~~~~~~-------~~~~l 293 (337)
T PRK03967 243 VRLALDHYDLIEERIDYIIKERERVRRELGEY---------A---Y----------PSDANFLLLKLD-------AYDYL 293 (337)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC---------c---C----------CCCCcEEEEhHH-------HHHHH
Confidence 5544432 2223333344444444444321 0 0 123556666542 44556
Q ss_pred CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhcCC
Q 021783 241 KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRTGP 306 (307)
Q Consensus 241 ~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~~~ 306 (307)
..+||.++.+.. ..++++||+++. ++.+++++.|.++++.++
T Consensus 294 ~~~gi~v~~~~~------------------------~~~~~~Ri~~~~~~~~~~l~~~l~~~~~~~~ 336 (337)
T PRK03967 294 LENGIVVRKLSG------------------------RLEGHIRVTVGKREENDEFIKALKEIKEGYG 336 (337)
T ss_pred HHCCEEEEeCCC------------------------CCCCeEEEecCCHHHHHHHHHHHHHHHHhcC
Confidence 567888864321 125679999987 788999999998887764
No 169
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.92 E-value=7.6e-23 Score=177.55 Aligned_cols=257 Identities=21% Similarity=0.215 Sum_probs=177.9
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----Ch--HHHHhhcCCCceEEEEeCCCCCc
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DL--DEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~--~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
+++ .++.++.++||+|++++++|.++. ..++..|.+++.++.+ +. +.++....+++++|++++++|||
T Consensus 70 ~a~~~~~~~~~~~g~~vl~~~~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~t 145 (350)
T cd00609 70 EALSLLLRALLNPGDEVLVPDPTYPGYE----AAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPT 145 (350)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCC
Confidence 344 444557789999999999999888 5667788999999875 22 56666667899999999999999
Q ss_pred cccccHH---HHHHHHHHcCCEEEEeCccCCCCcC--------CccCCCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 74 QQICDIR---KIAEMAHAHGALLLVDNSIMSPVLS--------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 74 G~~~~~~---~l~~~~~~~~~~li~D~a~~~~~~~--------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
|...|.+ +|.++|+++|+++|+|++|+.+... .....+.|++++|++|++ +.+|.+.|+++++++.+.
T Consensus 146 G~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~-~~~g~~~G~i~~~~~~~~ 224 (350)
T cd00609 146 GAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTF-GLPGLRIGYLIAPPEELL 224 (350)
T ss_pred CcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeeccccc-CCcccceEEEecCHHHHH
Confidence 9999755 5558999999999999999754321 234557899999999999 455677999999875666
Q ss_pred HHHHHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 143 KELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+.+...........+...+......++. +....+.+.++++.+.+.+++...... ....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-----------------~~~~ 287 (350)
T cd00609 225 ERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVV-----------------VKPS 287 (350)
T ss_pred HHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-----------------cCCC
Confidence 6666655554444444444444444433 344445556667777777765532100 0112
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHH
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDL 298 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l 298 (307)
.+.++++.+.+......+.+.+.+.||.+..+..+.. ..++++|++++.. ++.++.+
T Consensus 288 ~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~---------------------~~~~~iRi~~~~~--~~~i~~~ 344 (350)
T cd00609 288 GGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGE---------------------GGEGFVRLSFATP--EEELEEA 344 (350)
T ss_pred ccEEEEEecCCCChHHHHHHHHHhCCEEEeccccccc---------------------CCCCeEEEEeeCC--HHHHHHH
Confidence 4567777776544466777778888998887654221 1356799999986 6666666
Q ss_pred HHHHh
Q 021783 299 DKALR 303 (307)
Q Consensus 299 ~~~l~ 303 (307)
.++|+
T Consensus 345 ~~al~ 349 (350)
T cd00609 345 LERLA 349 (350)
T ss_pred HHHhh
Confidence 66554
No 170
>PLN02483 serine palmitoyltransferase
Probab=99.92 E-value=3.1e-23 Score=185.91 Aligned_cols=255 Identities=17% Similarity=0.179 Sum_probs=169.0
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC-------CCc-----e-EEEEeCCCC
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-------PWT-----K-LVWVESPTN 71 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~-------~~~-----~-~v~~~~~~n 71 (307)
.++.++++|||+|++++++|++.. ..++..|++++.++.+|++++++.++ +++ + +|++++..|
T Consensus 176 ~~i~al~~~Gd~Vi~d~~~h~s~~----~~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s 251 (489)
T PLN02483 176 TIIPALIGKGGLIISDSLNHNSIV----NGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYS 251 (489)
T ss_pred HHHHHhCCCCCEEEEcchhhHHHH----HHHHHcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCC
Confidence 456678999999999999999887 55778999999999988888876653 222 4 555667889
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccCCCCcC----------CccCCCccEEEeccccccccCCCceeEEEEEcChhH
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS----------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~----------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
++|.+.++++|.++|++||+++|+|++|+.+... .....++|++++|+||++ |+. +|+++++++ +
T Consensus 252 ~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~-g~~---GG~i~~~~~-l 326 (489)
T PLN02483 252 MEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSF-GSC---GGYIAGSKE-L 326 (489)
T ss_pred CCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhc-ccC---ceEEEcCHH-H
Confidence 9999999999999999999999999999854321 112246899999999999 444 599988755 4
Q ss_pred HHHHHHHHHh--cCCCCChhhHHHHhhccc---------cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchH
Q 021783 142 AKELYFLQNA--EGSGLAPFDCWICLRGVK---------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 210 (307)
Q Consensus 142 ~~~~~~~~~~--~~~~~~~~~~~~~~~~l~---------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~ 210 (307)
.+.+...... .+...++.....+.++++ ....+.+++.++.+.+.+.|++.. + .+ .+
T Consensus 327 i~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G-~-~v--~~-------- 394 (489)
T PLN02483 327 IQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMG-F-EV--LG-------- 394 (489)
T ss_pred HHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCC-C-cc--cC--------
Confidence 4444433221 122223222222333332 223445667777777888887541 1 00 00
Q ss_pred HHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--
Q 021783 211 LHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-- 288 (307)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-- 288 (307)
...++++++.+........+.+.|.++||.+..... |.. ....+++|++++.
T Consensus 395 ------~~~sp~~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~f------p~~--------------p~~~~~vRi~isa~~ 448 (489)
T PLN02483 395 ------DNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVVVGF------PAT--------------PLLLARARICISASH 448 (489)
T ss_pred ------CCCCCEEEEEECCHHHHHHHHHHHHHCCcEEeeeCC------CCC--------------CCCCceEEEEeCCCC
Confidence 112456666665444467788888778988774221 100 1123569999976
Q ss_pred --CChHHHHHHHHHHHhcCC
Q 021783 289 --EDVNDLISDLDKALRTGP 306 (307)
Q Consensus 289 --~~~~~~i~~l~~~l~~~~ 306 (307)
+++++.++.|.+.++.+.
T Consensus 449 t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 449 SREDLIKALEVISEVGDLVG 468 (489)
T ss_pred CHHHHHHHHHHHHHHHHHhC
Confidence 677777777777765543
No 171
>PLN02721 threonine aldolase
Probab=99.92 E-value=3.2e-23 Score=180.25 Aligned_cols=253 Identities=20% Similarity=0.205 Sum_probs=162.1
Q ss_pred HHHHHHhcC-CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC-------CCceEEEEeC-C
Q 021783 4 LAAVTHLLG-TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG-------PWTKLVWVES-P 69 (307)
Q Consensus 4 l~~~~~~~~-~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~-------~~~~~v~~~~-~ 69 (307)
+.++.++++ +||+|++++++|.+..... ..+...|++++.++.+ |++++++.++ +++++|++++ +
T Consensus 69 ~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~ 147 (353)
T PLN02721 69 LISVLVHCDVRGSEVILGDNSHIHLYENG-GISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTH 147 (353)
T ss_pred HHHHHHHccCCCCeEEEcCccceehhccc-chhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccc
Confidence 445555666 9999999999986655210 1456789999988853 7899999987 6899999986 5
Q ss_pred CCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCc---C-Ccc--CCCccEEEeccccccccCCCceeEEEEEcChh
Q 021783 70 TNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL---S-RPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGER 140 (307)
Q Consensus 70 ~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~---~-~~~--~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~ 140 (307)
+||+|.++| +++|.++|+++|+++|+|++|..+.. . ... ..++|.++.|+||+++++. +|+++.+ +.
T Consensus 148 ~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~---G~~~~~~-~~ 223 (353)
T PLN02721 148 ANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPV---GSVIVGS-KS 223 (353)
T ss_pred cccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCce---eeEEecC-HH
Confidence 778999886 78999999999999999999864421 1 111 2368899999999996542 3445555 44
Q ss_pred HHHHHHHHHHhcCCCCC--hhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 141 LAKELYFLQNAEGSGLA--PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 141 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+.+.+.......+.... ...+.....+++....++++..++.+.+.+.|++.+.+. .. .. ..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~------------~~---~~ 287 (353)
T PLN02721 224 FIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAEGLNQIKGLR-VN------------VA---AV 287 (353)
T ss_pred HHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcE-Ee------------cC---Cc
Confidence 54444444332222211 112222233343333334444555666677666543220 00 00 11
Q ss_pred CCceEEEEeCCH--HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChH
Q 021783 219 AGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVN 292 (307)
Q Consensus 219 ~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~ 292 (307)
.++++++.++.. .....+.+.|..+||.++.+. ++++|++++. ++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~---------------------------~~~lR~~~~~~~~~~~i~ 340 (353)
T PLN02721 288 ETNIVYFDITDGSRITAEKLCKSLEEHGVLLMPGN---------------------------SSRIRVVTHHQISDSDVQ 340 (353)
T ss_pred cceEEEEEccCCccccHHHHHHHHHhCCcEEecCC---------------------------CceEEEEecCcCCHHHHH
Confidence 256777877542 236788888888899887653 3459999974 6666
Q ss_pred HHHHHHHHHHhc
Q 021783 293 DLISDLDKALRT 304 (307)
Q Consensus 293 ~~i~~l~~~l~~ 304 (307)
++++.|++++..
T Consensus 341 ~~~~~l~~~~~~ 352 (353)
T PLN02721 341 YTLSCFQQAALT 352 (353)
T ss_pred HHHHHHHHHhhc
Confidence 667776666543
No 172
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.92 E-value=8.2e-23 Score=179.78 Aligned_cols=252 Identities=17% Similarity=0.132 Sum_probs=167.6
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCC---CceEEEEeCCCCCccccccHHH
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP---WTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
.++..++++||+|+++++.|+++. ..+...|++++.++..|++++++.+++ +++++++++++|++|...++++
T Consensus 114 ~~l~~~~~~gd~V~~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~ 189 (385)
T PRK05958 114 AVLTALAGKGDLIVSDKLNHASLI----DGARLSRARVRRYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAE 189 (385)
T ss_pred HHHHHhCCCCCEEEEeCccCHHHH----HHHHhcCCceEEeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHH
Confidence 445567899999999999998887 445667999999998899999998864 4667777789999999999999
Q ss_pred HHHHHHHcCCEEEEeCccCCCCcC----------CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH-H
Q 021783 82 IAEMAHAHGALLLVDNSIMSPVLS----------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-N 150 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~~~~~~~----------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~-~ 150 (307)
|.++|++||+++|+|++|+.+.+. .....+.++++.|+||++ +++ +|+++.+++ +.+.+.... .
T Consensus 190 i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~---Gg~~~~~~~-~~~~~~~~~~~ 264 (385)
T PRK05958 190 LVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSS---GAAVLGSET-LIDYLINRARP 264 (385)
T ss_pred HHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccC---CcEEEcCHH-HHHHHHHhCcc
Confidence 999999999999999999765432 111224568999999999 455 478777644 444333221 1
Q ss_pred h-cCCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 151 A-EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 151 ~-~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
. .+...++.....+..+++.+ ....+...++.+.+.+.++... ++-. ...+++++|.
T Consensus 265 ~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~---------~~~~----------~~~~~~~~~~ 325 (385)
T PRK05958 265 FIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALG---------FQLM----------DSQSAIQPLI 325 (385)
T ss_pred ceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC---------CCcC----------CCCCCEEEEE
Confidence 1 11223334444444444322 2334455556666666666431 1101 1246788888
Q ss_pred eCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 021783 227 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 227 ~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 304 (307)
+++.....++.+.|.++||.++.+..+. ...+++++|||++....++.++.+.+.|++
T Consensus 326 ~~~~~~~~~~~~~l~~~gI~v~~~~~~~--------------------~~~~~~~lRis~~~~~~~~~i~~~l~~l~~ 383 (385)
T PRK05958 326 VGDNERALALAAALQEQGFWVGAIRPPT--------------------VPAGTSRLRITLTAAHTEADIDRLLEALAE 383 (385)
T ss_pred eCCHHHHHHHHHHHHHCCceEecccCCC--------------------CCCCCceEEEEecCCCCHHHHHHHHHHHHh
Confidence 8765457788888888899887633210 001246799999865555555555555543
No 173
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.92 E-value=8.2e-24 Score=186.89 Aligned_cols=129 Identities=16% Similarity=0.242 Sum_probs=105.8
Q ss_pred HHHhcCCC---CeEEEcCCCCcchHHHHhhhcccCCcEE----EEecCC-----ChHHHHhhc---CCCceEEEEeCCCC
Q 021783 7 VTHLLGTG---EEIVAGDDLYGGTDRLLSRVTPKTGVVV----KRVNTC-----DLDEVASAI---GPWTKLVWVESPTN 71 (307)
Q Consensus 7 ~~~~~~~g---d~Vlv~~~~~~~~~~~~~~~~~~~g~~~----~~v~~~-----d~~~l~~~l---~~~~~~v~~~~~~n 71 (307)
+.+++++| ++|++++.+|++....|...++..|+++ +.++.+ |++++++.+ +++|++|++++++|
T Consensus 103 ~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~ 182 (406)
T TIGR01814 103 LASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQY 182 (406)
T ss_pred HHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEecccc
Confidence 34455554 3688989999998877766677788887 455432 678887776 47899999999999
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEc
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVK 137 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~ 137 (307)
+||.+.|+++|.++|+++|+++++|++|+.|..+ +..++|+|++++|+|||++|++| +|+.+.+
T Consensus 183 ~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~pG--~~l~v~~ 247 (406)
T TIGR01814 183 YTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGPG--AGAFVHE 247 (406)
T ss_pred ccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCCCC--eEEEEeh
Confidence 9999999999999999999999999999999987 77788999999999999976766 5544444
No 174
>PRK07908 hypothetical protein; Provisional
Probab=99.92 E-value=3.1e-23 Score=179.84 Aligned_cols=245 Identities=17% Similarity=0.170 Sum_probs=161.7
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
++.++.. +++| .+++..|+|..+. ..++..|++++.++.+ |++ .+.++++++++++|+||||.++
T Consensus 87 al~~~~~-l~~~-~viv~~P~y~~~~----~~~~~~G~~i~~v~~~~~~~~d~~----~l~~~~~~i~l~np~NPTG~~~ 156 (349)
T PRK07908 87 GFALLAR-LRPR-RAAVVHPSFTEPE----AALRAAGIPVHRVVLDPPFRLDPA----AVPDDADLVVIGNPTNPTSVLH 156 (349)
T ss_pred HHHHHHh-cCCC-eEEEeCCCChHHH----HHHHHcCCEEEeeccCcccCcChh----HhccCCCEEEEcCCCCCCCCCc
Confidence 3433444 6775 5677889997776 5567789999999875 233 3456789999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCccCC---CCcCCc--cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhc
Q 021783 78 DIRKIAEMAHAHGALLLVDNSIMS---PVLSRP--LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 152 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~~~---~~~~~~--~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~ 152 (307)
+.++|.++|++ +.++|+|++|+. +..... ...+..++++||||.+ +.+|+|+||++++++ +.+.+......
T Consensus 157 ~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~-~l~GlRiG~~~~~~~-~~~~~~~~~~~- 232 (349)
T PRK07908 157 PAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTW-SLAGLRVGYALGAPD-VLARLTRGRAH- 232 (349)
T ss_pred CHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEEEeeccccc-CCccceeeeeecCHH-HHHHHHhcCCC-
Confidence 99999999975 788999999863 211111 1234678999999999 778999999998755 43434332221
Q ss_pred CCCCChhhHHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEe
Q 021783 153 GSGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 227 (307)
Q Consensus 153 ~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 227 (307)
...+..........+ +.++...+.+.++.+.+.+.|++. ++ .+.. ...+.++++++
T Consensus 233 -~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~-~~~~----------------p~~g~~~~~~~ 293 (349)
T PRK07908 233 -WPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GA-RVVD----------------PAAAPFVLVRV 293 (349)
T ss_pred -CCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-Cc-Eecc----------------CCCceEEEEEC
Confidence 122222222222222 223333444455555566666543 11 1110 12477888888
Q ss_pred CCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhc
Q 021783 228 GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRT 304 (307)
Q Consensus 228 ~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~ 304 (307)
++ ...+.+.++++||.++.|..|. +..++++|||++. ++++++++.|++.+..
T Consensus 294 ~~---~~~~~~~l~~~gI~v~~g~~f~---------------------~~~~~~vRis~~~~~~~~~l~~al~~~~~~ 347 (349)
T PRK07908 294 PD---AELLRKRLRERGIAVRRGDTFP---------------------GLDPDYLRLAVRPRAEVPVLVQALAEILKA 347 (349)
T ss_pred Cc---HHHHHHHHHhCCEEEEECCCCC---------------------CCCCCeEEEEeCCCccHHHHHHHHHHHHhc
Confidence 74 4567777888899998887632 1135789999986 7999999999888754
No 175
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.1e-23 Score=181.19 Aligned_cols=228 Identities=12% Similarity=0.146 Sum_probs=152.9
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHH-HhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEE
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEV-ASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALL 93 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l-~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~l 93 (307)
|+|++++|+|+.+. ..++..|++++.++.++--.+ +..+ .+++++++++|+||||.+++.+++.+++ +++++|
T Consensus 97 d~v~v~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~~-~~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~i 170 (335)
T PRK14808 97 DRSVFFPPTYSCYR----IFAKAVGAKFLEVPLTKDLRIPEVNV-GEGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFV 170 (335)
T ss_pred CcEEECCCCHHHHH----HHHHHcCCeEEEecCCCcCCCChhHc-cCCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEE
Confidence 78999999998888 778889999999987521001 1112 3578999999999999999999999998 579999
Q ss_pred EEeCccCCCC---c-CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccc
Q 021783 94 LVDNSIMSPV---L-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 169 (307)
Q Consensus 94 i~D~a~~~~~---~-~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (307)
|+|++|.... . +........++++||||.+ +.+|+|+||++++++ +.+.+...... ...+...+.++...++
T Consensus 171 i~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~-~l~GlRvG~~v~~~~-~~~~l~~~~~~--~~~~~~~q~a~~~~l~ 246 (335)
T PRK14808 171 ALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAF-SLAAQRIGYVVSSEK-FIDAYNRVRLP--FNVSYVSQMFAKVALD 246 (335)
T ss_pred EEECchhhhcCCchHHHHHhCCCEEEEEechhhc-cCcccceEEEEeCHH-HHHHHHHhcCC--CCCCHHHHHHHHHHHh
Confidence 9999996321 1 1122345789999999999 678999999999865 44444443321 2233344444444443
Q ss_pred c---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceee
Q 021783 170 T---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSIT 246 (307)
Q Consensus 170 ~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 246 (307)
. +....+...++.+.+.+.|+... + . +. ...++++++.++..+ ...+.+.+..+||.
T Consensus 247 ~~~~~~~~~~~~~~~r~~l~~~L~~~g-~--------~------~~----~~~g~f~~~~l~~~~-~~~~~~~l~~~Gi~ 306 (335)
T PRK14808 247 HREIFEERTKFIVEERERMKSALREMG-Y--------R------IT----DSRGNFVFIFMEKEE-KERLLEHLRAKNIA 306 (335)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCC-C--------E------EC----CCCCeEEEEeCCCcc-HHHHHHHHHHCCeE
Confidence 2 22233344444455555555431 1 0 00 114678888886543 57788888889998
Q ss_pred cCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHH
Q 021783 247 VSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDK 300 (307)
Q Consensus 247 v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~ 300 (307)
++. . ++++|||++. ++.+++++.|.+
T Consensus 307 V~~--~--------------------------~~~~Risi~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 307 VRS--F--------------------------REGVRITIGKREENDMILKELEV 333 (335)
T ss_pred EEE--C--------------------------CCCeEEecCCHHHHHHHHHHHHh
Confidence 873 1 1349999986 677777777654
No 176
>PLN02672 methionine S-methyltransferase
Probab=99.91 E-value=7.4e-23 Score=193.21 Aligned_cols=253 Identities=14% Similarity=0.111 Sum_probs=166.1
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCC-CceEEEEeCCC-CCccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGP-WTKLVWVESPT-NPRQQ 75 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~-~~~~v~~~~~~-n~tG~ 75 (307)
.++.++++|||+|+++.|+|+.+. ..++..|++++.+|++ |++++++++.+ +.+++++++|+ ||||.
T Consensus 769 lll~aLl~pGD~VLVp~PtY~~Y~----~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~ 844 (1082)
T PLN02672 769 KLVLCCVQEGGTLCFPAGSNGTYV----SAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGL 844 (1082)
T ss_pred HHHHHHcCCCCEEEEeCCChHHHH----HHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCc
Confidence 355678899999999999999888 6678889999999873 56889999865 45688999997 99999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-C------c-------cC---CCccEEEeccccccccCCCceeEEEE
Q 021783 76 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-R------P-------LE---LGADIVMHSATKFIAGHSDVMAGVLA 135 (307)
Q Consensus 76 ~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-~------~-------~~---~~~d~~~~s~~K~~~g~~g~~~G~~~ 135 (307)
+++ +++|+++|++||++||+|++|+.-.+. . . .. .+..++++|+||.+ +.+|+|+||++
T Consensus 845 v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf-~lpGLRIGylI 923 (1082)
T PLN02672 845 LYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTEL-LSGGHEFGFLA 923 (1082)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhh-ccHHHHheeEE
Confidence 986 788899999999999999999721111 0 0 00 12578999999999 67899999999
Q ss_pred EcChhHHHHHHHHHHhcCCC-CChhhHHHHhhcc--------ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCC
Q 021783 136 VKGERLAKELYFLQNAEGSG-LAPFDCWICLRGV--------KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 206 (307)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l--------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~ 206 (307)
++++.+.+.+.......... .....+......+ +.+....+.+.++.+.+.+.|+... + .+.
T Consensus 924 ap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~G-i-~v~------- 994 (1082)
T PLN02672 924 LNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACG-W-DVL------- 994 (1082)
T ss_pred eCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C-eEe-------
Confidence 98775666555443222221 1122222222111 1223334445666666777776541 1 111
Q ss_pred CchHHHhhhccCCCceEEEEeCC-----------------HHHHHHHHhcCCc-ceeecCCCCccceeecccccCCCCCc
Q 021783 207 PGHELHYSQAKGAGSVLSFLTGS-----------------LALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIP 268 (307)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~l~~-~gi~v~~g~~~~~~~~p~~~~~~~~~ 268 (307)
++ ..+.++|+.+.. ......+.+.+.. .||.+.+|..|
T Consensus 995 --------~P-eGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~F--------------- 1050 (1082)
T PLN02672 995 --------EP-QGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWT--------------- 1050 (1082)
T ss_pred --------cC-CcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCccc---------------
Confidence 11 123344443310 0125667776654 49999888642
Q ss_pred HHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHh
Q 021783 269 VEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 303 (307)
Q Consensus 269 ~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~ 303 (307)
| .++++||+++. +++++.++.|+++++
T Consensus 1051 -------G-~~g~~RIsfa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1051 -------G-IPGYCRFSFALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred -------C-CCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 1 25689999986 467777777777654
No 177
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.91 E-value=5.7e-23 Score=182.88 Aligned_cols=127 Identities=20% Similarity=0.264 Sum_probs=101.2
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------------ChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------------DLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
+++|||+|++++|.|+.+..... ....|++++.++.+ |+++++++++++++++++++|+||||.++
T Consensus 180 ll~pGD~Vlv~~P~y~~y~~~~~--l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vl 257 (521)
T TIGR03801 180 LLKKGDKIALMTPIFTPYLEIPE--LPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAM 257 (521)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHH--HhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCC
Confidence 68999999999999988873321 23357888877652 45789988888999999999999999999
Q ss_pred c---HHHHHHHHHHc--CCEEEEeCccCCCCc--CCcc--CCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 78 D---IRKIAEMAHAH--GALLLVDNSIMSPVL--SRPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 78 ~---~~~l~~~~~~~--~~~li~D~a~~~~~~--~~~~--~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
+ +++|+++|++| +++||+|++|+.-.. .... ..+..+++.|+||.+ |.+|.|+||++.+++
T Consensus 258 s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~f-g~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 258 SDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYF-GATGWRLGTIALHKD 327 (521)
T ss_pred CHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhc-cCchhhhhhhhcCch
Confidence 7 77888889987 999999999974221 1111 124689999999999 778999999999865
No 178
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.3e-22 Score=179.17 Aligned_cols=122 Identities=15% Similarity=0.133 Sum_probs=100.7
Q ss_pred HhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC---C----ChHHHHhhcC---CCceEEEEeCCCCCcccccc
Q 021783 9 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---C----DLDEVASAIG---PWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 9 ~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~----d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~ 78 (307)
++++|||+|++++|+|+.+. ..++..|++++.++. + |++.+++.+. ++++++++++||||||.+++
T Consensus 119 ~~~~~Gd~Vlv~~P~y~~~~----~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s 194 (404)
T PTZ00376 119 RFLPAGTTVYVSNPTWPNHV----NIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPT 194 (404)
T ss_pred HhcCCCCEEEEcCCCchhHH----HHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCC
Confidence 56799999999999999988 778899999999997 2 6888888874 45677888999999999996
Q ss_pred ---HHHHHHHHHHcCCEEEEeCccCCCCcC----------C-ccCCCccEEEeccccccccCCCceeEEEE
Q 021783 79 ---IRKIAEMAHAHGALLLVDNSIMSPVLS----------R-PLELGADIVMHSATKFIAGHSDVMAGVLA 135 (307)
Q Consensus 79 ---~~~l~~~~~~~~~~li~D~a~~~~~~~----------~-~~~~~~d~~~~s~~K~~~g~~g~~~G~~~ 135 (307)
+++|+++|++||+++|+|++|..-... . ....+..++++||||.+ +.+|+|+||++
T Consensus 195 ~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~-~~~GlRvG~~~ 264 (404)
T PTZ00376 195 EEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNM-GLYGERIGALH 264 (404)
T ss_pred HHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcc-cccccccceEE
Confidence 778888999999999999999633221 1 11123679999999999 77899999984
No 179
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.91 E-value=5.2e-23 Score=183.36 Aligned_cols=127 Identities=20% Similarity=0.297 Sum_probs=100.4
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-------CChHHHHhhcCCCceEEEEeCCCCCcccccc---H
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---I 79 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---~ 79 (307)
+++|||+|++++|.|+.+..... ....|++++.++. .|++++++++++++|++++++|+||||.+++ +
T Consensus 186 ll~pGD~Vlv~~P~y~~Y~~~~~--l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l 263 (527)
T PRK09275 186 LLKAGDKIALMTPIFTPYLEIPE--LPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESL 263 (527)
T ss_pred cCCCCCEEEEeCCChHHHHHHHH--HcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHH
Confidence 68999999999999988873311 2234667777753 2678999988899999999999999999997 7
Q ss_pred HHHHHHHHH--cCCEEEEeCccCCCCcC--Ccc--CCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 80 RKIAEMAHA--HGALLLVDNSIMSPVLS--RPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 80 ~~l~~~~~~--~~~~li~D~a~~~~~~~--~~~--~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
++|+++|++ +|++||+|++|..-... ... ..+..+++.||||.+ +.+|.|+||++++++
T Consensus 264 ~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f-~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 264 EKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYF-GATGWRLGVIALHED 328 (527)
T ss_pred HHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhc-cCcHhHHhhhhcCch
Confidence 888888965 49999999999742211 111 124789999999999 788999999999876
No 180
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.91 E-value=2.1e-23 Score=173.69 Aligned_cols=184 Identities=20% Similarity=0.184 Sum_probs=139.3
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------------ChHHHHhhcCCCceEEEEeC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------------DLDEVASAIGPWTKLVWVES 68 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------------d~~~l~~~l~~~~~~v~~~~ 68 (307)
|+ .++++++++||+|++.+|.|..+. ...+..|.++++++.. |+++++..++++||+|++++
T Consensus 105 ai~~~~~~l~~~GDeVii~eP~fd~Y~----~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~nt 180 (420)
T KOG0257|consen 105 AISSALLGLLNPGDEVIVFEPFFDCYI----PQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNT 180 (420)
T ss_pred HHHHHHHHHcCCCCEEEEecCcchhhh----hHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeC
Confidence 44 477889999999999999998888 5667788888888863 89999999999999999999
Q ss_pred CCCCcccccc---HHHHHHHHHHcCCEEEEeCccC----CCC--c---CCccCCCccEEEeccccccccCCCceeEEEEE
Q 021783 69 PTNPRQQICD---IRKIAEMAHAHGALLLVDNSIM----SPV--L---SRPLELGADIVMHSATKFIAGHSDVMAGVLAV 136 (307)
Q Consensus 69 ~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~----~~~--~---~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~ 136 (307)
||||||.+.+ +++|+++|++||+++|.|++|. .+. . ..+..++..+-++|++|++ |..|.|.||+++
T Consensus 181 PhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf-~~TGWrlGW~ig 259 (420)
T KOG0257|consen 181 PHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTF-GVTGWRLGWAIG 259 (420)
T ss_pred CCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEecccccee-eeeeeeeeeeec
Confidence 9999999996 8899999999999999999985 221 1 1466778999999999999 789999999999
Q ss_pred cChhHHHHHHHHHHhcCCCCChhhHHHHhhc----c--------ccHHHHHHHHHHHHHHHHHHHhcC
Q 021783 137 KGERLAKELYFLQNAEGSGLAPFDCWICLRG----V--------KTMALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l--------~~~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
++.+.......+.......+...+.+...+ + .......+.+.++.+.+.+.|...
T Consensus 260 -p~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l 326 (420)
T KOG0257|consen 260 -PKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL 326 (420)
T ss_pred -hHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 455655555554443322221111111111 1 222335566677777777777754
No 181
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.91 E-value=1.7e-22 Score=179.24 Aligned_cols=258 Identities=16% Similarity=0.123 Sum_probs=157.6
Q ss_pred CCCeEEE-cCCCCcchHHHHh--hhcccCCcEEEEecC------CChHHHHhhcCCCceEEEEeCCCCCcccccc---HH
Q 021783 13 TGEEIVA-GDDLYGGTDRLLS--RVTPKTGVVVKRVNT------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IR 80 (307)
Q Consensus 13 ~gd~Vlv-~~~~~~~~~~~~~--~~~~~~g~~~~~v~~------~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---~~ 80 (307)
+||+|++ .+|+|+.+..... ......+..+..++. .|+++++ +.++++++++++|+||||.+++ ++
T Consensus 125 ~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~ 202 (416)
T PRK09440 125 SLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELE 202 (416)
T ss_pred CCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHH
Confidence 6899999 7999988763211 011222333333322 2667776 3567899999999999999997 77
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCc----CC--ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCC
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVL----SR--PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 154 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~----~~--~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~ 154 (307)
+|+++|++||+++|+|++|+.... .. ....+..++++||||+ +.+|+|+||++++++ +.+.+.........
T Consensus 203 ~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~--~~pGlRiG~~i~~~~-l~~~~~~~~~~~~~ 279 (416)
T PRK09440 203 KLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL--GLPGVRCGIVIADEE-IIEALSNMNGIISL 279 (416)
T ss_pred HHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc--CCCcceEEEEeCCHH-HHHHHHHHHHHhcc
Confidence 889999999999999999974211 11 1113578999999994 668999999998754 55555554444333
Q ss_pred CCChhhHHHHhhcccc--HHH-----HHHHHHHHHHHHHHHHhcCC-CccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 155 GLAPFDCWICLRGVKT--MAL-----RVEKQQDNAQKIAEFLASHP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 155 ~~~~~~~~~~~~~l~~--~~~-----~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
..+...+.++...++. +.. ..+...++.+.+.+.+++.. .. .+.. . . ...+.++|+.
T Consensus 280 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~-~~~~-----------~--~-p~gg~fiw~~ 344 (416)
T PRK09440 280 APGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDE-PCLI-----------H--K-PEGAIFLWLW 344 (416)
T ss_pred CCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CeEE-----------e--c-CCCceEEEEE
Confidence 4455555555555432 111 11222333344455554321 10 0000 0 1 1236677787
Q ss_pred eCC-HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHh
Q 021783 227 TGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 303 (307)
Q Consensus 227 ~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~ 303 (307)
++. .....++.+.+..+||.+.+|..|..-. . . ......+++|||++. +++++.++.|.++++
T Consensus 345 ~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~-~---~----------~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~~ 410 (416)
T PRK09440 345 FKDLPITTEELYQRLKARGVLVVPGHYFFPGL-D---E----------DWPHAHQCIRMNYVQDDEEIEKGIAILAEEVE 410 (416)
T ss_pred CCCCCCCHHHHHHHHHHCCEEEechHhhCCCC-c---c----------ccCCcCceEEEEecCCHHHHHHHHHHHHHHHH
Confidence 764 2235677777878899999887643100 0 0 000013689999963 677777888877775
Q ss_pred c
Q 021783 304 T 304 (307)
Q Consensus 304 ~ 304 (307)
+
T Consensus 411 ~ 411 (416)
T PRK09440 411 K 411 (416)
T ss_pred H
Confidence 4
No 182
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.91 E-value=7.9e-23 Score=177.94 Aligned_cols=255 Identities=17% Similarity=0.155 Sum_probs=164.3
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC--CCceEEEEeCCCCCccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG--PWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~--~~~~~v~~~~~~n~tG~~~ 77 (307)
.++..++++||+|++..+.+++.. +...++..|++++.++.+ |++++++.++ ++++++++++++|++|...
T Consensus 65 ~~~~~~~~~~~~vi~~~~~~~~~~--~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~ 142 (355)
T TIGR03301 65 ATIGSLVPRDGKLLVLINGAYGER--LAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILN 142 (355)
T ss_pred HHHHhccCCCCeEEEECCCchhhH--HHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchh
Confidence 445556788888776555443332 225567789999988863 7899999886 4567788889999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH--------
Q 021783 78 DIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------- 148 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~-------- 148 (307)
|+++|.++|++||+++|+|++++.+..+ +...+++|++++|+||+++|++| .|+++++++.+.. +...
T Consensus 143 ~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~-~~~~~~~~~~~~ 219 (355)
T TIGR03301 143 PLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPG--FGFVIARRDLLEA-SAGNARSLYLDL 219 (355)
T ss_pred HHHHHHHHHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcccccCCc--eeEEEECHHHHHH-hhCCCCCceeeH
Confidence 9999999999999999999999887655 56677899999999999888888 7999998765433 2200
Q ss_pred -------HH--hcCCCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 149 -------QN--AEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 149 -------~~--~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
.. ....+.+......+..+++. +....++..++.+.+.+.+++.. + .+..+
T Consensus 220 ~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g-~-~~~~~------------ 285 (355)
T TIGR03301 220 YDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALG-F-QPLLP------------ 285 (355)
T ss_pred HHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcC-C-eeecC------------
Confidence 00 01112222222222223322 34444555666666777665431 1 11111
Q ss_pred hhccCCCceEEEEeCCH--HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCCh
Q 021783 214 SQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDV 291 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~ 291 (307)
.....+.++++.++.. ....++.+.+.++||.++.|..+ ..+++||++.....
T Consensus 286 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~------------------------~~~~iRis~~~~~~ 340 (355)
T TIGR03301 286 -ERWQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLT------------------------LADTFRIGTIGEID 340 (355)
T ss_pred -CCCCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccc------------------------cccEEEEecCCCCC
Confidence 0011233566776531 23567888888889988776531 02469999865344
Q ss_pred HHHHHHHHHHHh
Q 021783 292 NDLISDLDKALR 303 (307)
Q Consensus 292 ~~~i~~l~~~l~ 303 (307)
++.++.+.+.|+
T Consensus 341 ~~~i~~~~~~l~ 352 (355)
T TIGR03301 341 AADIERLLEAIK 352 (355)
T ss_pred HHHHHHHHHHHH
Confidence 455555555444
No 183
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=3.1e-22 Score=169.47 Aligned_cols=263 Identities=20% Similarity=0.218 Sum_probs=189.6
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC--CCceEEEEeCCCCCc
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG--PWTKLVWVESPTNPR 73 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~--~~~~~v~~~~~~n~t 73 (307)
+|+ +++..+++|||+||+.....++.. |.+.++.+|++++.+... |+++++++++ ++.++|.++|..++|
T Consensus 67 ~amEAav~sl~~pgdkVLv~~nG~FG~R--~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETST 144 (383)
T COG0075 67 LAMEAAVASLVEPGDKVLVVVNGKFGER--FAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETST 144 (383)
T ss_pred HHHHHHHHhccCCCCeEEEEeCChHHHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcc
Confidence 355 677789999999998888776666 559999999999998874 9999999998 578899999999999
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH------
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY------ 146 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~------ 146 (307)
|...|+++|+++|++||.++|+|++.+.|..+ ++++||+|+++++.+|++++|+| .|++..+++.+.....
T Consensus 145 Gvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ 222 (383)
T COG0075 145 GVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSF 222 (383)
T ss_pred cccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCce
Confidence 99999999999999999999999999988877 99999999999999999999999 9999999776543221
Q ss_pred ---------HHHH--hcCCCCChhhHHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchH
Q 021783 147 ---------FLQN--AEGSGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 210 (307)
Q Consensus 147 ---------~~~~--~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~ 210 (307)
.+.. ....+++....+....++ +.++.+++++..+...+++.++.... +
T Consensus 223 ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl---------~------ 287 (383)
T COG0075 223 YLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGL---------E------ 287 (383)
T ss_pred eecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC---------c------
Confidence 1111 112233333333333333 34678899999999999998886531 1
Q ss_pred HHhhhccCCCceEEEEeCC-HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe-c-
Q 021783 211 LHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-G- 287 (307)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~- 287 (307)
++.++......+..+..+. .+........+++.|+.+..|.- ......+||+. |
T Consensus 288 ~~~~~~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~-----------------------~l~gkifRIGhMG~ 344 (383)
T COG0075 288 LFADPERRSPTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQG-----------------------PLKGKIFRIGHMGN 344 (383)
T ss_pred cccCcccCCCceEEEECCCCCCcHHHHHHHHHhCCEEeccccc-----------------------ccCccEEEEecCcc
Confidence 1111111123455566543 22222233445556777766543 11234599987 3
Q ss_pred --cCChHHHHHHHHHHHhcCC
Q 021783 288 --IEDVNDLISDLDKALRTGP 306 (307)
Q Consensus 288 --~~~~~~~i~~l~~~l~~~~ 306 (307)
..++...+..|..+|.+++
T Consensus 345 ~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 345 VRPEDVLAALAALEAALRELG 365 (383)
T ss_pred CCHHHHHHHHHHHHHHHHHcC
Confidence 2788888888888887653
No 184
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.91 E-value=3.2e-22 Score=174.00 Aligned_cols=232 Identities=16% Similarity=0.141 Sum_probs=156.9
Q ss_pred cHH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 2 AAL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 2 aal-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
+|+ .++.++ ++|||+|++++++|+++. ..+...|++++.+|.+ |++++++.++++|++|+ |+|++
T Consensus 57 ~aL~~~l~al~~~pGd~Viv~~~t~~~~~----~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~tk~Ii---p~~~~ 129 (376)
T TIGR02379 57 AALEMAALLLDIQPGDEVIMPSYTFVSTA----NAFVLRGAKIVFVDIRPDTMNIDETLIESAITHRTKAIV---PVHYA 129 (376)
T ss_pred HHHHHHHHHcCCCCcCEEEECCCCcHHHH----HHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCC
Confidence 355 344555 789999999999999887 4456779999999874 77899999999999987 56689
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccCCCCcCCccCCC--ccEEEecccc--ccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSATK--FIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~d~~~~s~~K--~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
|...|+++|.++|++||+++|+|++|+.+...+....| .|+.++||++ .+. +|.++|+++++++++.+.+..+.
T Consensus 130 G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K~l~--~g~~gG~v~~~~~~~~~~~~~~~ 207 (376)
T TIGR02379 130 GVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFHETKNYT--SGGEGGALLINDQAFIERAEIIR 207 (376)
T ss_pred CCccCHHHHHHHHHHCCCEEEEECccccCCccCCcccCCCCCEEEEeCCCCCcCc--ccCCceEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999987643332333 3777788755 442 34458999998888877776655
Q ss_pred HhcC---------------------CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc
Q 021783 150 NAEG---------------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 208 (307)
Q Consensus 150 ~~~~---------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 208 (307)
.... ..++...+.+....++.++...++..++++...+.|...........+.... +
T Consensus 208 ~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~--~ 285 (376)
T TIGR02379 208 EKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPN--G 285 (376)
T ss_pred HhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCC--C
Confidence 4221 1233455556656677666666666666666666665432100011111100 0
Q ss_pred hHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCC
Q 021783 209 HELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGS 251 (307)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~ 251 (307)
......++++.++...+.+++.+.|+.+||.++.+.
T Consensus 286 -------~~~~~~~~~i~~~~~~~r~~l~~~L~~~gI~~~~~~ 321 (376)
T TIGR02379 286 -------CQHNAHMFYIKLKDEDDRNELIKYLKEQEIMAVFHY 321 (376)
T ss_pred -------CeeeeEEEEEEECCcCCHHHHHHHHHHCCCCccccC
Confidence 000113455666543347899999999999887543
No 185
>PRK08637 hypothetical protein; Provisional
Probab=99.91 E-value=5.3e-22 Score=174.35 Aligned_cols=253 Identities=14% Similarity=0.130 Sum_probs=155.3
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhc-ccCCcEEEEecC--C----ChHHHHhhcC----CCceEEEEeCCCCCcc
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVT-PKTGVVVKRVNT--C----DLDEVASAIG----PWTKLVWVESPTNPRQ 74 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~-~~~g~~~~~v~~--~----d~~~l~~~l~----~~~~~v~~~~~~n~tG 74 (307)
++.++++|||+|++++|+|+.+. ..+ ...|++++.+|. + |++++++.++ +.++++++++|+||||
T Consensus 85 ~~~~l~~~gd~Vlv~~P~y~~~~----~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG 160 (388)
T PRK08637 85 VADLFVDQGDTVLLPDHNWGNYK----LTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTG 160 (388)
T ss_pred HHHHhcCCCCEEEEcCCCCccHH----HHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCC
Confidence 33457899999999999998887 332 357999998886 2 6788888875 5566777889999999
Q ss_pred cccc---HHHHHHHHHH-----cCCEEEEeCccCCCCcC-----C-----ccCCCcc--EEEeccccccccCCCceeEEE
Q 021783 75 QICD---IRKIAEMAHA-----HGALLLVDNSIMSPVLS-----R-----PLELGAD--IVMHSATKFIAGHSDVMAGVL 134 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~-----~~~~li~D~a~~~~~~~-----~-----~~~~~~d--~~~~s~~K~~~g~~g~~~G~~ 134 (307)
.+++ +++|+++|++ |+++||+|++|..-.+. . ....+.. ++++|+||.+ +.+|+|+||+
T Consensus 161 ~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~-~~pGlRlG~~ 239 (388)
T PRK08637 161 YTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEE-FVWGFRVGFI 239 (388)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccC-CCcccceEEE
Confidence 9986 6677777765 89999999999632211 1 1112232 4456999988 5789999999
Q ss_pred EEcC-----hhHHHHHHHH----HHhcCCCCChhhHHHHhhcccc--HHHHH----HHHHHHHHHHHHHHhcCCCccEEe
Q 021783 135 AVKG-----ERLAKELYFL----QNAEGSGLAPFDCWICLRGVKT--MALRV----EKQQDNAQKIAEFLASHPRVKKVN 199 (307)
Q Consensus 135 ~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~--~~~~~----~~~~~~~~~l~~~l~~~~~~~~~~ 199 (307)
+... +.+.+.+... ........+...+..+...++. +.... +...+..+.+.+.++...
T Consensus 240 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~------ 313 (388)
T PRK08637 240 TFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGK------ 313 (388)
T ss_pred EEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC------
Confidence 9753 4444444321 1111223344445544444432 11111 122222333334443221
Q ss_pred cCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC
Q 021783 200 YAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT 278 (307)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 278 (307)
+. +++... + ...+.++|+++++.+ ..++.+.+ +++||.+..+ .
T Consensus 314 ---~~--~~~~~~--~-~~~g~~~~~~l~~~~-~~~l~~~l~~~~gv~~~~~---------------------------~ 357 (388)
T PRK08637 314 ---YD--DAWQAY--P-FNSGYFMCLKLKGVD-AEELRVHLLEKYGIGTIAL---------------------------N 357 (388)
T ss_pred ---CC--CCcccc--c-ccceEEEEecCChHH-HHHHHHHHhhhcceEEEec---------------------------c
Confidence 00 011111 1 123556666776443 67787877 4678865421 1
Q ss_pred CCeEEEEecc---CChHHHHHHHHHHHhcC
Q 021783 279 EDLVRISVGI---EDVNDLISDLDKALRTG 305 (307)
Q Consensus 279 ~~~iRis~~~---~~~~~~i~~l~~~l~~~ 305 (307)
++++||+++. +++++.++.|.++++++
T Consensus 358 ~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 358 ETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred CCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 4569999975 67888888888888754
No 186
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.91 E-value=2.9e-22 Score=176.22 Aligned_cols=255 Identities=16% Similarity=0.095 Sum_probs=166.4
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC----CCceEEEEeCCCCCccccccH
Q 021783 4 LAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 4 l~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~~ 79 (307)
+.++.+++++||+|+++++.|+++. ..+...|++++.++..|++++++.+. +++++|++++++|+||.+.|+
T Consensus 107 ~~a~~~~~~~gd~vi~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~ 182 (385)
T TIGR01825 107 QGVLSALLRKGDIVLSDELNHASII----DGLRLTKATKKIYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPL 182 (385)
T ss_pred HHHHHHhCCCCCEEEEEccccHHHH----HHHHhcCCceEEeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCH
Confidence 3556667899999999999998876 33445688888888778888888765 368899999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcC---------CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH-
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLS---------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ- 149 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~- 149 (307)
++|.++|++||+++|+|++|+.+.+. .....+.|++++|+||+++ .+ +|+++.+++ +.+.+....
T Consensus 183 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~---gG~~~~~~~-~~~~~~~~~~ 257 (385)
T TIGR01825 183 PEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIG-VV---GGYAAGHKE-LIEYLKNRAR 257 (385)
T ss_pred HHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhh-cC---CCEEecCHH-HHHHHHHhCc
Confidence 99999999999999999999765432 0112468999999999994 34 588887654 434343322
Q ss_pred Hhc-CCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEE
Q 021783 150 NAE-GSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 225 (307)
Q Consensus 150 ~~~-~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 225 (307)
... ++...+..+..+..+++.+ ....++..++.+.+.+.|++. +++ +. ...++++.+
T Consensus 258 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~---------g~~------~~----~~~~~~~~~ 318 (385)
T TIGR01825 258 PFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL---------GYD------TG----GSETPITPV 318 (385)
T ss_pred cccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc---------CCC------CC----CCCCCEEEE
Confidence 121 2222333333333444322 123344455555566666532 111 00 012346666
Q ss_pred EeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHH
Q 021783 226 LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKA 301 (307)
Q Consensus 226 ~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~ 301 (307)
.++.......+.+.|..+||.++.+.... ...+.+++|++++. +++++.++.+++.
T Consensus 319 ~~~~~~~~~~~~~~L~~~gi~v~~~~~~~--------------------~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~ 378 (385)
T TIGR01825 319 VIGDEKAAQEFSRRLFDEGIFAQSIVFPT--------------------VPRGTARIRNIPTAEHTKDDLDQALDAYEKV 378 (385)
T ss_pred EECCHHHHHHHHHHHHHCCcEEcccCCCC--------------------CCCCCceEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 66544346678888877799875432200 01123579999853 7888888888888
Q ss_pred HhcCC
Q 021783 302 LRTGP 306 (307)
Q Consensus 302 l~~~~ 306 (307)
+++.+
T Consensus 379 ~~~~~ 383 (385)
T TIGR01825 379 GKELG 383 (385)
T ss_pred HHHhC
Confidence 76653
No 187
>PLN02397 aspartate transaminase
Probab=99.91 E-value=4.7e-22 Score=176.11 Aligned_cols=125 Identities=15% Similarity=0.163 Sum_probs=99.9
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-------CChHHHHhhcC---CCceEEEEeCCCCCccc
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIG---PWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~---~~~~~v~~~~~~n~tG~ 75 (307)
.+++++.|||+|++++|+|+.+. ..++..|++++.++. .|++.+++.+. ++++++++++||||||.
T Consensus 134 ~~~~~~~pGd~Vlv~~P~y~~y~----~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~ 209 (423)
T PLN02397 134 EFLARFYPGSTIYIPNPTWGNHH----NIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGV 209 (423)
T ss_pred HHHHHhCCCCEEEEeCCCchhHH----HHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCC
Confidence 34455579999999999999888 667888999999875 16777777664 56788888999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-------C---cc-CCCccEEEeccccccccCCCceeEEEE
Q 021783 76 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-------R---PL-ELGADIVMHSATKFIAGHSDVMAGVLA 135 (307)
Q Consensus 76 ~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-------~---~~-~~~~d~~~~s~~K~~~g~~g~~~G~~~ 135 (307)
+++ +++|+++|++||+++|+|++|..-... . .. .....++++||||.+ +++|+|+||++
T Consensus 210 v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~-~~~G~RvG~~v 282 (423)
T PLN02397 210 DPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNM-GLYGERVGALS 282 (423)
T ss_pred CCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccC-CCccccceEEE
Confidence 996 778899999999999999999743221 0 11 113579999999999 78899999985
No 188
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.91 E-value=7.5e-22 Score=169.67 Aligned_cols=242 Identities=17% Similarity=0.183 Sum_probs=156.4
Q ss_pred HHHHHhcCCCCeEEEc---CCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCcccc---cc
Q 021783 5 AAVTHLLGTGEEIVAG---DDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI---CD 78 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~---~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~---~~ 78 (307)
.++.++++|||+|+++ .|.|+++. ..++..|+++.. .+++++++. .+++++|+++. +|++|.+ .+
T Consensus 86 ~~~~al~~~gd~Vli~~~d~p~~~s~~----~~~~l~ga~~~~--~~~l~~l~~--~~~~~lIiitg-~s~~G~v~~~~~ 156 (346)
T TIGR03576 86 ATILALEPPGRKVVHYLPEKPAHPSIP----RSCKLAGAEYFE--SDELSELKK--IDGTSLVVITG-STMDLKVVSEED 156 (346)
T ss_pred HHHHHhCCCCCEEEECCCCCCCchhHH----HHHHHcCCEEec--cCCHHHHhh--CcCceEEEEEC-CCCCCcccCHHH
Confidence 5667788999999975 45776665 556778887643 356666543 35678888865 5889998 47
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcC-----CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcC
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 153 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~ 153 (307)
+++|+++|+++|+++++|++|+.+... .....+.|++++|+||++. |.|+||++++++ +.+.+........
T Consensus 157 L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKala---G~r~G~v~~~~~-li~~l~~~~~~~~ 232 (346)
T TIGR03576 157 LKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMD---GPRGGLLAGRKE-LVDKIKSVGEQFG 232 (346)
T ss_pred HHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhcc---ccceEEEEeCHH-HHHHHHHhhcCcc
Confidence 999999999999999999999976421 1223467899999999663 556999999865 5555555554444
Q ss_pred CCCChhhHHHHhhccccHH--HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHH
Q 021783 154 SGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 231 (307)
Q Consensus 154 ~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (307)
.+.++..+..+..+++... ...+.+.++.+.+.+.++. +. ++ +...+++++++++.+
T Consensus 233 ~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~-----------~~------~~----~~~~~f~~~~~~~~~ 291 (346)
T TIGR03576 233 LEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK-----------LN------VE----RTPTGFVIKGVEEEK 291 (346)
T ss_pred cCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh-----------CC------CC----cCCCeEEEEeCCCCC
Confidence 4445556666666665432 1122222222222333321 10 00 112446777775322
Q ss_pred HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCC-----hHHHHHHHHHHH
Q 021783 232 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED-----VNDLISDLDKAL 302 (307)
Q Consensus 232 ~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~-----~~~~i~~l~~~l 302 (307)
..+.+.+.+..+||.+++|..|. ..++++|||++..+ .+.+++.|++.+
T Consensus 292 ~~~~~~~ll~~~gV~v~~~~~f~----------------------~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 292 LIEIGLDLLRNYGIITITAVGMP----------------------GASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HHHHHHHHHHhCCEEEeCCcccC----------------------CCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 23455566777899988876531 12578999998744 778888877665
No 189
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.90 E-value=5.7e-23 Score=194.29 Aligned_cols=280 Identities=12% Similarity=0.013 Sum_probs=171.0
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------------C--hHHHHhhc----------CCCceEEE
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------------D--LDEVASAI----------GPWTKLVW 65 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------------d--~~~l~~~l----------~~~~~~v~ 65 (307)
+++||+|+++..+|.+.. .|...++..|++++.++.+ + .+++++.+ .+++++|.
T Consensus 119 ~~~gd~Iv~t~~eH~svl-~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa 197 (805)
T PLN02724 119 WSSESHFCYTLENHNSVL-GIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFA 197 (805)
T ss_pred CCCCCeEEEeeccccchH-HHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEE
Confidence 588999999999997776 5556677889999998764 1 14455543 24678999
Q ss_pred EeCCCCCccccccHHHHHHHHHHc--------CCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEE
Q 021783 66 VESPTNPRQQICDIRKIAEMAHAH--------GALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAV 136 (307)
Q Consensus 66 ~~~~~n~tG~~~~~~~l~~~~~~~--------~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~ 136 (307)
+++.+|.||.+.|++.+..+++.. ++++++|++|+.|+.+ +..++++|++++|+|||+++|.| .|++++
T Consensus 198 ~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G--~G~L~v 275 (805)
T PLN02724 198 FPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTG--LGALLV 275 (805)
T ss_pred EEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCC--ceEEEE
Confidence 999999999999999775555432 3589999999999988 88888999999999999977999 999999
Q ss_pred cChhHHHHHHHHH-----------------------HhcCCCCChhhHHHHhhccccHHH-HHHHHHHHHH----HHHHH
Q 021783 137 KGERLAKELYFLQ-----------------------NAEGSGLAPFDCWICLRGVKTMAL-RVEKQQDNAQ----KIAEF 188 (307)
Q Consensus 137 ~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~----~l~~~ 188 (307)
+++.......... +....+.+......+..+++.+.. .++++.+... ++.+.
T Consensus 276 r~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~ 355 (805)
T PLN02724 276 RRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANS 355 (805)
T ss_pred ehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 9764432111100 111111221222222233333222 2333334334 44444
Q ss_pred HhcCCCccEEecCCCCCCCchHHHhhh-----ccCCCceEEEEeCCHH----HHHHHHhcCCcceeecCCCCccceeecc
Q 021783 189 LASHPRVKKVNYAGLPEHPGHELHYSQ-----AKGAGSVLSFLTGSLA----LSKHVVETTKYFSITVSFGSVKSLISMP 259 (307)
Q Consensus 189 l~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~v~~g~~~~~~~~p 259 (307)
|++.+. -...|.++++... ...++++++|.+.+.+ ....+...+..+||.++.|.++ .++
T Consensus 356 L~~l~~--------~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~C---a~~ 424 (805)
T PLN02724 356 LRNLKH--------GNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFC---NPG 424 (805)
T ss_pred HHhccC--------CCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeecccc---Cch
Confidence 443321 0011223333211 1236789999985432 1122223345679999999983 333
Q ss_pred cccCCCCCcHHHHH--------------hc-CCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 021783 260 CFMSHASIPVEVRQ--------------AR-GLTEDLVRISVGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 260 ~~~~~~~~~~~~~~--------------~~-~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 304 (307)
.+..+..+..+... .. +...+.+|+|++..++.+.++.|.++|++
T Consensus 425 ~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~ 484 (805)
T PLN02724 425 ACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIIS 484 (805)
T ss_pred HHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence 22222222222111 01 22348999999997777777777777764
No 190
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=4.2e-22 Score=176.30 Aligned_cols=254 Identities=17% Similarity=0.173 Sum_probs=164.6
Q ss_pred HHHHHhc--CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC----CCceEEEEeCCCCCcccccc
Q 021783 5 AAVTHLL--GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 5 ~~~~~~~--~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~ 78 (307)
.++..+. .+||.|+++...|.+.. ..++..|++++.++.+|.+++++.+. +++++|++++|+||||.+.|
T Consensus 121 ~~i~~l~~~~~g~~vi~~~~~h~s~~----~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~ 196 (410)
T PRK13392 121 AALSTLGKLLPGCVILSDALNHASMI----EGIRRSGAEKQVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAP 196 (410)
T ss_pred HHHHHHhcCCCCCEEEEehhhhHHHH----HHHHHcCCeEEEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCccccc
Confidence 4444443 48999998888887776 34566889988888777777766653 57899999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcC-Cc--------cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLS-RP--------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~-~~--------~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
+++|.++|++||+++|+|++|+.|.+. .. .....|++++|+||++++ . +||++++++ +.+.+....
T Consensus 197 l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~-~---GG~~~~~~~-~~~~l~~~~ 271 (410)
T PRK13392 197 IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGC-L---GGYIAASAD-LIDFVRSFA 271 (410)
T ss_pred HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhc-c---cchhhcCHH-HHHHHHHhC
Confidence 999999999999999999999865531 11 111468999999999954 3 488887644 444444333
Q ss_pred Hh--cCCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 150 NA--EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 150 ~~--~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
.. .....++..+..+..+++.. ....+++.++.+.+.+.++... ++-. +..++++.
T Consensus 272 ~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~~~----------~~~~~~~~ 332 (410)
T PRK13392 272 PGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNANG---------IPVM----------PSPSHIVP 332 (410)
T ss_pred cchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC---------CCCC----------CCCCCEEE
Confidence 22 12223334444444444322 2333445566666666665431 1101 11355666
Q ss_pred EEeCCHHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHH
Q 021783 225 FLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLD 299 (307)
Q Consensus 225 ~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~ 299 (307)
+.++......++.+.|. .+||.++.+.. |.. ..+.+++||+++. ++++++++.|.
T Consensus 333 i~~~~~~~~~~~~~~L~~~~GI~v~~~~~------p~~--------------~~~~~~lRis~~~~~t~edid~l~~aL~ 392 (410)
T PRK13392 333 VMVGDPTLCKAISDRLMSEHGIYIQPINY------PTV--------------PRGTERLRITPTPLHDDEDIDALVAALV 392 (410)
T ss_pred EEeCCHHHHHHHHHHHHHhCCEEEeeeCC------CCC--------------CCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 66654444677888774 67998876432 100 0124579999864 67777777777
Q ss_pred HHHhcCC
Q 021783 300 KALRTGP 306 (307)
Q Consensus 300 ~~l~~~~ 306 (307)
+++++.+
T Consensus 393 ~~~~~~~ 399 (410)
T PRK13392 393 AIWDRLE 399 (410)
T ss_pred HHHHHcC
Confidence 7766544
No 191
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=2.1e-22 Score=170.75 Aligned_cols=274 Identities=23% Similarity=0.270 Sum_probs=182.8
Q ss_pred cHH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 2 AAL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 2 aal-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
+|+ .++.++ ++|||+|++++.+|.++. +..-..|++++++|.+ |++.++++|+++||+|+..| -.
T Consensus 60 ~AL~laL~al~ig~GDeVI~ps~TfvATa----n~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVh---l~ 132 (374)
T COG0399 60 AALHLALLALAIGPGDEVIVPSFTFVATA----NAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVH---LA 132 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEecCCchHHHH----HHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCeEEEEeh---hc
Confidence 355 334432 799999999999999998 6667889999999986 89999999999999999544 46
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccCCCCcCCccCCC--ccEEEecc--ccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSA--TKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~d~~~~s~--~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
|..+|+++|.++|++||++||+|++|+.|........| -|+.++|| .|.+.. | .||+++++++++.+..+.+.
T Consensus 133 G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~itt--g-EGGav~tnd~ela~k~~~lr 209 (374)
T COG0399 133 GQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATKNLTT--G-EGGAVVTNDEELAEKARSLR 209 (374)
T ss_pred cCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCCCccc--c-CceEEEeCCHHHHHHHHHHH
Confidence 89999999999999999999999999999876444444 47888888 677732 3 49999999999988877665
Q ss_pred HhcC----------------CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 150 NAEG----------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 150 ~~~~----------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
...- +.+...++.+....|+.++...++..++++...+.|++.+.+ ..+.
T Consensus 210 ~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~---~~p~----------- 275 (374)
T COG0399 210 NHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGI---TLPP----------- 275 (374)
T ss_pred HhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc---cccC-----------
Confidence 4322 234456666767777777666666667777777767655421 1111
Q ss_pred hhccCCC--ceEEEEeCCH-HHHHHHHhcCCcceeecCCCCccceeecccccCC-----CCCcHHHHHhcCCCCCeEEEE
Q 021783 214 SQAKGAG--SVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH-----ASIPVEVRQARGLTEDLVRIS 285 (307)
Q Consensus 214 ~~~~~~~--~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~iRis 285 (307)
....... ..+.+.++.. ...+.+.+.|++.||.+ ......+..+|..... ..++.... ..+..+.+.
T Consensus 276 ~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~~~gi~~-~~~~~P~~~~~~~~~~~~~~~~~lp~ae~----~~~r~l~LP 350 (374)
T COG0399 276 EPDGAVHAWHLYTILVDEEGISRDALMESLKEAGVGA-VVYFRPLHLQPAYRQLGYFPEGDLPNAED----LSERILSLP 350 (374)
T ss_pred CCCCceeeeeeeEEEecCCCCCHHHHHHHHHhCCCCc-eEEeeccccchhhhcccccccCCCchHHH----HhhCeEEcc
Confidence 1111111 2333344432 44788899999888872 1111112222211111 12222211 123557776
Q ss_pred ecc----CChHHHHHHHHHHHhc
Q 021783 286 VGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 286 ~~~----~~~~~~i~~l~~~l~~ 304 (307)
+.- ++++++++.|.+++.+
T Consensus 351 ~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 351 LHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred CCCCCCHHHHHHHHHHHHHHhcc
Confidence 643 7888888888877653
No 192
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.90 E-value=9.3e-22 Score=172.27 Aligned_cols=267 Identities=11% Similarity=0.120 Sum_probs=168.3
Q ss_pred cHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHh---hcC-----------CCceEEEEe
Q 021783 2 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVAS---AIG-----------PWTKLVWVE 67 (307)
Q Consensus 2 aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~---~l~-----------~~~~~v~~~ 67 (307)
|+.+++.+++++||+|+++++.|+++... +...+++++.++.+|++++++ .+. +++++|+++
T Consensus 70 a~~~~i~~l~~~GD~Vl~~~~~h~s~~~~----~~l~~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E 145 (392)
T PLN03227 70 TTSSTVAAFAKRGDLLVVDRGVNEALLVG----VSLSRANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVE 145 (392)
T ss_pred HHHHHHHHhCCCCCEEEEeccccHHHHHH----HHHcCCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEc
Confidence 34467777899999999999999888743 344567888888877766555 332 368899999
Q ss_pred CCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCCcCC----------c-cCCCccEEEeccccccccCCCceeEEEEE
Q 021783 68 SPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR----------P-LELGADIVMHSATKFIAGHSDVMAGVLAV 136 (307)
Q Consensus 68 ~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~----------~-~~~~~d~~~~s~~K~~~g~~g~~~G~~~~ 136 (307)
+++|++|.+.|++++.++|++||+++|+|++|+.|.... . ...++|+++.|++|++ |+. +|++++
T Consensus 146 ~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~~---gg~v~~ 221 (392)
T PLN03227 146 GLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GSV---GGMTVG 221 (392)
T ss_pred CCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hcc---CcEEec
Confidence 999999999999999999999999999999998554321 1 1236799999999998 444 688877
Q ss_pred cChhHHHHHHHHHH--hcCCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc-hH
Q 021783 137 KGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG-HE 210 (307)
Q Consensus 137 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~-~~ 210 (307)
+++ +.+.+..... ..+...++..++.+..++... +.+.++..++.+.+.+.|++.. ++...+..+ ..
T Consensus 222 ~~~-~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~------~~~~~~~rg~~~ 294 (392)
T PLN03227 222 SEE-VVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSS------HPYALKLRNRLV 294 (392)
T ss_pred CHH-HHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC------Cccccccccccc
Confidence 754 4333332221 122233354555554444322 3456666777777777776421 111111100 00
Q ss_pred HHhhhccCCCceEEEEeCCHHH---------HHHHHhcCCcceeecCC-CCccceeecccccCCCCCcHHHHHhcCCCCC
Q 021783 211 LHYSQAKGAGSVLSFLTGSLAL---------SKHVVETTKYFSITVSF-GSVKSLISMPCFMSHASIPVEVRQARGLTED 280 (307)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~gi~v~~-g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 280 (307)
+. ....++++.+.+.+... ...+.+.+.++|+.+.. |.. .....| ..++.
T Consensus 295 ~~---~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~-~~~~~~----------------~~P~~ 354 (392)
T PLN03227 295 IT---SDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGH-VKKFLQ----------------LVPPP 354 (392)
T ss_pred cC---CCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccc-cCCcCC----------------CCCCc
Confidence 00 02247788888865322 24777788888887753 211 000001 11245
Q ss_pred eEEEEecc----CChHHHHHHHHHHHh
Q 021783 281 LVRISVGI----EDVNDLISDLDKALR 303 (307)
Q Consensus 281 ~iRis~~~----~~~~~~i~~l~~~l~ 303 (307)
.+|++++. +|+++.++.|.++++
T Consensus 355 ~iR~~~~~~~t~eei~~~~~~l~~~~~ 381 (392)
T PLN03227 355 CLRVVANASHTREDIDKLLTVLGEAVE 381 (392)
T ss_pred eEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 69999987 455555555555554
No 193
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.90 E-value=9.6e-22 Score=173.26 Aligned_cols=121 Identities=16% Similarity=0.101 Sum_probs=98.6
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-------CChHHHHhhcC---CCceEEEEeCCCCCcccccc--
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIG---PWTKLVWVESPTNPRQQICD-- 78 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~-- 78 (307)
++|||+|++++|+|+.+. ..++..|++++.++. .|++++++.+. ++++++++++||||||.+++
T Consensus 117 ~~pGd~Vlv~~P~y~~~~----~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~ 192 (396)
T PRK09257 117 AFPDAKVWVSDPTWPNHR----AIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPE 192 (396)
T ss_pred hCCCCeEEECCCCcccHH----HHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHH
Confidence 589999999999999998 667889999999985 16788888775 34567777899999999996
Q ss_pred -HHHHHHHHHHcCCEEEEeCccCCCCcC---------Ccc-CCCccEEEeccccccccCCCceeEEEEE
Q 021783 79 -IRKIAEMAHAHGALLLVDNSIMSPVLS---------RPL-ELGADIVMHSATKFIAGHSDVMAGVLAV 136 (307)
Q Consensus 79 -~~~l~~~~~~~~~~li~D~a~~~~~~~---------~~~-~~~~d~~~~s~~K~~~g~~g~~~G~~~~ 136 (307)
+++|+++|++||+++|+|++|..-... ... ..+..++++||||.+ +++|+|+||+++
T Consensus 193 ~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~-~~~GlRiG~~~~ 260 (396)
T PRK09257 193 QWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNF-GLYGERVGALSV 260 (396)
T ss_pred HHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcC-ccccccceeEEE
Confidence 788999999999999999999742211 011 124679999999999 778999999984
No 194
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.90 E-value=6.2e-22 Score=172.12 Aligned_cols=271 Identities=18% Similarity=0.186 Sum_probs=175.7
Q ss_pred HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 5 AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 5 ~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
.++.++ +++||+|+++.++|.++. ..+...|++++.++.+ |++++++.+++++++|++++ ++|...
T Consensus 48 ~~l~~l~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~ 120 (352)
T cd00616 48 LALRALGIGPGDEVIVPSFTFVATA----NAILLLGATPVFVDIDPDTYNIDPELIEAAITPRTKAIIPVH---LYGNPA 120 (352)
T ss_pred HHHHHcCCCCCCEEEeCCcchHHHH----HHHHHcCCeEEEEecCCCcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcC
Confidence 455555 589999999999998887 4456679999998763 68999999988999999764 689999
Q ss_pred cHHHHHHHHHHcCCEEEEeCccCCCCcCCcc--CCCccEEEeccc--cccccCCCceeEEEEEcChhHHHHHHHHHHhc-
Q 021783 78 DIRKIAEMAHAHGALLLVDNSIMSPVLSRPL--ELGADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNAE- 152 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~--~~~~d~~~~s~~--K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~- 152 (307)
|+++|.++|+++|+++|+|++|+.|...... ....|+.++|++ |+++++. +|+++.+++.+.+.+.......
T Consensus 121 ~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~~~~~~---gg~~~~~~~~~~~~~~~~~~~~~ 197 (352)
T cd00616 121 DMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHPTKNLTTGE---GGAVVTNDEELAERARLLRNHGR 197 (352)
T ss_pred CHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCCCCCCcccC---ceEEEECCHHHHHHHHHHHHcCC
Confidence 9999999999999999999999987654322 112588888876 9994433 7888888766655544333221
Q ss_pred --------------CCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhc--
Q 021783 153 --------------GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA-- 216 (307)
Q Consensus 153 --------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-- 216 (307)
...++...+.+....++.+....++..++++.+.+.|+..+++ ++....+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~--------------~~~~~~~~~ 263 (352)
T cd00616 198 DRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAERYKELLADLPGI--------------RLPDVPPGV 263 (352)
T ss_pred CCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCc--------------cCCCCCCCC
Confidence 1123344555555555555555666667777777777654432 1111111
Q ss_pred cCCCceEEEEeCC--HHHHHHHHhcCCcceeecCCCCccceeecccc----cCCCCCcHHHHHhcCCCCCeEEEEeccCC
Q 021783 217 KGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCF----MSHASIPVEVRQARGLTEDLVRISVGIED 290 (307)
Q Consensus 217 ~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~----~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 290 (307)
.....++.|.+++ .....++.+.|..+||.++..........+.. .....++.. ....++.+|++++...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a----~~~~~~~l~l~~~~~~ 339 (352)
T cd00616 264 KHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNA----EDLAERVLSLPLHPSL 339 (352)
T ss_pred ceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHH----HHHHhCeEEccCCCCC
Confidence 1134577777763 34478888888888885543211000000000 000011111 1112367999999988
Q ss_pred hHHHHHHHHHHHh
Q 021783 291 VNDLISDLDKALR 303 (307)
Q Consensus 291 ~~~~i~~l~~~l~ 303 (307)
.++.++.+.++|+
T Consensus 340 t~~di~~i~~~l~ 352 (352)
T cd00616 340 TEEEIDRVIEALR 352 (352)
T ss_pred CHHHHHHHHHHhC
Confidence 8888888887764
No 195
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.90 E-value=5.9e-22 Score=171.89 Aligned_cols=137 Identities=20% Similarity=0.287 Sum_probs=107.9
Q ss_pred cHH-HHHHHhcCCCC---------------eEEEcCCCCcchHHHHhhhcccCCcEEEEecCC---ChHHHHhhcCCCce
Q 021783 2 AAL-AAVTHLLGTGE---------------EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---DLDEVASAIGPWTK 62 (307)
Q Consensus 2 aal-~~~~~~~~~gd---------------~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---d~~~l~~~l~~~~~ 62 (307)
+|+ .++.+++++|| +|+++.|.|..+...+...+...|+++++++.+ |+++++++++++|+
T Consensus 71 ~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~~t~ 150 (363)
T TIGR01437 71 AGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITEKTA 150 (363)
T ss_pred HHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcChhce
Confidence 345 56667788888 999988766544323335667789999998763 89999999999999
Q ss_pred EEE-EeCCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhH
Q 021783 63 LVW-VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 63 ~v~-~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
+++ +++++||+|.+.|+++|.++|++||+++++|++|+... .....+|+|++++|+||++.||. +|+++.+++.+
T Consensus 151 ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-~~~~~~g~D~~~~S~~K~l~gp~---~G~l~~~~~~i 226 (363)
T TIGR01437 151 AILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-QKYYRLGADLVIYSGAKAIEGPT---SGLVLGKKKYI 226 (363)
T ss_pred EEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-HHHHHcCCCEEEEeCCcccCCCc---eEEEEEcHHHH
Confidence 766 67889999999999999999999999999999998322 22334578999999999987765 78888875544
Q ss_pred H
Q 021783 142 A 142 (307)
Q Consensus 142 ~ 142 (307)
.
T Consensus 227 ~ 227 (363)
T TIGR01437 227 E 227 (363)
T ss_pred H
Confidence 3
No 196
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.90 E-value=9.5e-23 Score=171.90 Aligned_cols=123 Identities=21% Similarity=0.215 Sum_probs=112.8
Q ss_pred CCCC----eEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHH
Q 021783 12 GTGE----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKI 82 (307)
Q Consensus 12 ~~gd----~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l 82 (307)
..+| +|++...+|+.....+.. .+..|++++++|.+ |.+.+++.++++|+++.+.+++|.+|+..|++||
T Consensus 125 ~~~~~~~k~iitl~~eH~~v~~s~~~-l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~Pv~EI 203 (428)
T KOG1549|consen 125 FFGDKTKKHIITLQTEHPCVLDSCRA-LQEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQPVKEI 203 (428)
T ss_pred cccccccceEEEecccCcchhHHHHH-HHhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCccccccHHHH
Confidence 3466 999999999888777654 56778999999984 8899999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcC
Q 021783 83 AEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKG 138 (307)
Q Consensus 83 ~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~ 138 (307)
..+|+++++.+++|+||+.|..+ ++.++++|+++.|.|||| ||+| +|++++++
T Consensus 204 ~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~y-gp~~--iGaLYvr~ 257 (428)
T KOG1549|consen 204 VKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIY-GPPG--IGALYVRR 257 (428)
T ss_pred HHHhCcCCcEEEeehhhhcCCccccHHHcCchheeeeccccc-CCCc--ceEEEEcc
Confidence 99999999999999999999998 999999999999999999 6778 99999996
No 197
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.5e-21 Score=160.23 Aligned_cols=257 Identities=17% Similarity=0.110 Sum_probs=171.2
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|| .++.++-+||.+||++.|+|+-+. ..+...|.+++.++.. |++.++..++++|.++++.+|+||+|
T Consensus 138 AIe~~i~~LA~p~aNILlPrPGfp~Y~----~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcG 213 (447)
T KOG0259|consen 138 AIELAISSLANPGANILLPRPGFPLYD----TRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCG 213 (447)
T ss_pred HHHHHHHHhcCCCCceecCCCCCchHH----HhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCc
Confidence 45 455667899999999999998887 7789999999999872 89999999999999999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----CccCC---CccEEEeccccccccCCCceeEEEEEcChhHH-
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLEL---GADIVMHSATKFIAGHSDVMAGVLAVKGERLA- 142 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~~~~---~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~- 142 (307)
.+++ +++|+++|+++++.+|.|++|....+. .+..+ =..+.++|.||.. -.+|-|.||++..+..-.
T Consensus 214 nVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW-~VPGWRlGWi~~hD~~gvf 292 (447)
T KOG0259|consen 214 NVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRW-IVPGWRLGWIALHDPRGVF 292 (447)
T ss_pred ccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeeccccccc-ccCCceeeeEEEecccccc
Confidence 9996 999999999999999999999743321 22222 2478999999977 467999999999865311
Q ss_pred ---HHHHHHHHhcCCC--CChhhHHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHH
Q 021783 143 ---KELYFLQNAEGSG--LAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 212 (307)
Q Consensus 143 ---~~~~~~~~~~~~~--~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~ 212 (307)
..+..+.....-. +....+.+.-.-| +.+.....-+..+++-..++|+..+ .+..+
T Consensus 293 ~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP--------------~l~cp 358 (447)
T KOG0259|consen 293 RDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIP--------------CLTCP 358 (447)
T ss_pred cchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCC--------------CcccC
Confidence 1112222222211 1112222111111 2344455556666666666666554 33222
Q ss_pred hhhccCCCceEEEEe-----CCHHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe
Q 021783 213 YSQAKGAGSVLSFLT-----GSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 286 (307)
Q Consensus 213 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 286 (307)
.++. ...++++.+ .+.++...|.+.| +++.+-.-+|..|. -++|+|+++
T Consensus 359 ~kPe--g~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~-----------------------~~nw~Ri~i 413 (447)
T KOG0259|consen 359 VKPE--GCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFG-----------------------LKNWLRIVI 413 (447)
T ss_pred cCCC--cceEEEeccchhhhccccccHHHHHHHhhhcceEEecccccc-----------------------CCCeEEEEE
Confidence 2222 233444443 2333344444443 56667666766533 278999999
Q ss_pred cc--CChHHHHHHHHHHHh
Q 021783 287 GI--EDVNDLISDLDKALR 303 (307)
Q Consensus 287 ~~--~~~~~~i~~l~~~l~ 303 (307)
+. +.+++..++|+++.+
T Consensus 414 ~~~~~~leea~~Rik~Fc~ 432 (447)
T KOG0259|consen 414 TVEEEMLEEAFSRIKEFCD 432 (447)
T ss_pred ccChHHHHHHHHHHHHHHH
Confidence 86 567777777777654
No 198
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.89 E-value=3.5e-21 Score=168.77 Aligned_cols=273 Identities=18% Similarity=0.200 Sum_probs=174.2
Q ss_pred cHH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcC----CCceEEEEeCC
Q 021783 2 AAL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIG----PWTKLVWVESP 69 (307)
Q Consensus 2 aal-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~----~~~~~v~~~~~ 69 (307)
.|+ .++.++ +++||+|++++++|.++. ..+...|+++++++.+ |++++++.++ +++++|+++
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~~~~~~----~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~-- 128 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPITFVATA----NCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV-- 128 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcchHHHH----HHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe--
Confidence 355 344556 789999999999998887 5567889999999873 7899999998 789988864
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCccCCCCcCCccCCCc----cEEEeccc--cccccCCCceeEEEEEcChhHHH
Q 021783 70 TNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGA----DIVMHSAT--KFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 70 ~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~----d~~~~s~~--K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
|++|...++++|.++|++||+++|+|++|+.|...+....|. |+.++|+| |++..+ . +|+++.+++.+.+
T Consensus 129 -~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~S~~~~K~~~~~-~--GG~v~~~~~~~~~ 204 (380)
T TIGR03588 129 -DFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVFSFHPVKIITTA-E--GGAVTTNDEELAE 204 (380)
T ss_pred -CCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEEecCCCCccccc-C--ceEEEECCHHHHH
Confidence 468999999999999999999999999999886544444455 99999997 888543 3 7888888887776
Q ss_pred HHHHHHHhc-------------------------CCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEE
Q 021783 144 ELYFLQNAE-------------------------GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKV 198 (307)
Q Consensus 144 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 198 (307)
.+....... ...++...+.+....++.+....++..++++.+.+.|+..+.+.
T Consensus 205 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~-- 282 (380)
T TIGR03588 205 RMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKLDRFVAKRREIAARYDRLLKDLPYFT-- 282 (380)
T ss_pred HHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc--
Confidence 655443211 01223344455555566666666666777777777776554221
Q ss_pred ecCCCCCCCchHHHhhhccC--CCceEEEEeCC--HHHHHHHHhcCCcceeecCCCCccceeecccccC---CCCCcHHH
Q 021783 199 NYAGLPEHPGHELHYSQAKG--AGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFMS---HASIPVEV 271 (307)
Q Consensus 199 ~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~---~~~~~~~~ 271 (307)
....+... ....+.+.+.. ....+.+.+.|..+||.++.... .+...|.... ...++...
T Consensus 283 ------------~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~-~~~~~~~~~~~~~~~~~p~a~ 349 (380)
T TIGR03588 283 ------------PLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYI-PVHLQPYYRQGFGDGDLPSAE 349 (380)
T ss_pred ------------CCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCc-ccccChhhhccCCcCCCcHHH
Confidence 01000000 01222333332 12478888889889998875432 2222222111 11122221
Q ss_pred HHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 272 RQARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 272 ~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
. ..++.+++.++..-.++.++.+.++++
T Consensus 350 ~----~~~~~l~lP~~~~l~~~dv~~i~~~l~ 377 (380)
T TIGR03588 350 N----FYLAEISLPLHPALTLEQQQRVVETLR 377 (380)
T ss_pred H----HHhceEEcCCCCCCCHHHHHHHHHHHH
Confidence 1 123669998875334444444444443
No 199
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=7.9e-22 Score=154.05 Aligned_cols=253 Identities=18% Similarity=0.207 Sum_probs=178.5
Q ss_pred HHHHhcCCC-CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC--CCceEEEEeCCCCCccccc
Q 021783 6 AVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG--PWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 6 ~~~~~~~~g-d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~--~~~~~v~~~~~~n~tG~~~ 77 (307)
++.+.+-|| ++|+...|+|+.+. .-+...+++++.+|.+ +.+.+.+.+. +.+|++++++|+||||...
T Consensus 102 iiR~~c~PGkeKIl~cPPtysMY~----v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~i 177 (375)
T KOG0633|consen 102 IIRCVCDPGKEKILDCPPTYSMYV----VDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSII 177 (375)
T ss_pred HHhheecCCccceeecCCcceeEE----EEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCCCCCCcccc
Confidence 334467888 89999999998777 6678899999999985 7788888876 5899999999999999999
Q ss_pred cHHHHHHHHHHc-CCEEEEeCccC--CC---CcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH-H
Q 021783 78 DIRKIAEMAHAH-GALLLVDNSIM--SP---VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-N 150 (307)
Q Consensus 78 ~~~~l~~~~~~~-~~~li~D~a~~--~~---~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~-~ 150 (307)
..+.|.++.+.. |.++++|+||- .| .++...++..-+++.++||.+ |.+|+|.|+.+.+.+ +.+.+..+. +
T Consensus 178 k~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsf-GLAGiRvG~~~~~~~-ia~iln~~KaP 255 (375)
T KOG0633|consen 178 KEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSF-GLAGIRVGYGAFPLS-IAEILNRAKAP 255 (375)
T ss_pred cHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhc-CcceeEeecccccHH-HHHHHHhccCC
Confidence 888888887765 78999999994 22 234666788999999999999 889999999998854 444443332 2
Q ss_pred hcCCCCChhhHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC
Q 021783 151 AEGSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 228 (307)
Q Consensus 151 ~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (307)
...+......+..+.. +.+.++...+.+.+...++.+.|...+.+.+ .++ ....+++.+++.
T Consensus 256 YNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~--------~~g--------g~daNFiLi~v~ 319 (375)
T KOG0633|consen 256 YNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLND--------YPG--------GSDANFILIEVT 319 (375)
T ss_pred ccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccC--------CCC--------cccccEEEEEEc
Confidence 2322222222222222 4456666666777777777777776543322 211 224567888884
Q ss_pred CH--HHHHHH-HhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHH
Q 021783 229 SL--ALSKHV-VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKAL 302 (307)
Q Consensus 229 ~~--~~~~~~-~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l 302 (307)
+. .-++.+ .+.+-..|+.|++-+.... =+|++||++|. ++.+.+++.|++.+
T Consensus 320 ~~~n~~akkly~q~at~~gVvVRfrgse~~----------------------c~G~lRitvGt~EentvL~k~~K~~l 375 (375)
T KOG0633|consen 320 GGDNGMAKKLYKQDATKMGVVVRFRGSEEG----------------------CKGYLRITVGTPEENTVLMKCLKQFL 375 (375)
T ss_pred CCCcHHHHHHHHHHHHhcceEEEEcCCccc----------------------cceeEEEEcCCcccchHHHHHHHhhC
Confidence 22 224444 4445667999987554221 16789999997 88888998888764
No 200
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.89 E-value=3.1e-21 Score=170.80 Aligned_cols=254 Identities=17% Similarity=0.143 Sum_probs=164.2
Q ss_pred HHHHHhc--CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC----CCceEEEEeCCCCCcccccc
Q 021783 5 AAVTHLL--GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 5 ~~~~~~~--~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~ 78 (307)
.++..+. ++++.|+...+.|.+... .++..|+++..++.+|++++++.++ +++++|++++++|++|.+.|
T Consensus 121 ~ai~~l~~~~~~~~i~~~~~~h~s~~~----~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~ 196 (407)
T PRK09064 121 ATLSTLAKLIPDCVIFSDELNHASMIE----GIRRSRCEKHIFRHNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAP 196 (407)
T ss_pred HHHHHHhCCCCCCEEEEeCcchHHHHH----HHHHcCCcEEEECCCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccC
Confidence 3444444 378877777777776653 3455678888888888888888875 46899999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcC-Cc--------cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLS-RP--------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~-~~--------~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
+++|.++|++||+++|+|++|+.|.+. .. .....|++++||||.++ .. +|+++++++ +.+.+....
T Consensus 197 l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g-~~---GG~~~~~~~-~~~~l~~~~ 271 (407)
T PRK09064 197 IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFG-VM---GGYIAGSAA-LVDAVRSYA 271 (407)
T ss_pred HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhh-cc---CceEecCHH-HHHHHHHhC
Confidence 999999999999999999999855421 10 11245899999999994 44 588888754 444443332
Q ss_pred Hh-c-CCCCChhhHHHHhhccccHH---HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 150 NA-E-GSGLAPFDCWICLRGVKTMA---LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 150 ~~-~-~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
.. . ....++..+..+..+++.+. ...++..++.+.+.+.|++.. ++-. ...++++.
T Consensus 272 ~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~~~----------~~~~~iv~ 332 (407)
T PRK09064 272 PGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAAG---------IPVM----------PNESHIVP 332 (407)
T ss_pred ccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC---------CCCC----------CCCCCEEE
Confidence 21 1 22344444444445554332 223455566666666666431 1111 11356777
Q ss_pred EEeCCHHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHH
Q 021783 225 FLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLD 299 (307)
Q Consensus 225 ~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~ 299 (307)
+.+++......+.+.|. .+||.++.... |.. ..+.+++|+|++. +|++++++.|+
T Consensus 333 i~~~~~~~~~~l~~~L~~~~gi~v~~~~~------p~~--------------~~~~~~lRis~~~~~t~edi~~l~~~l~ 392 (407)
T PRK09064 333 VMVGDPEKCKKASDMLLEEHGIYVQPINY------PTV--------------PRGTERLRITPTPFHTDEMIDHLVEALV 392 (407)
T ss_pred EEeCCHHHHHHHHHHHHHhCCEEEeeECC------CCC--------------CCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 77765445777888775 45898865322 100 0123569999985 66777777777
Q ss_pred HHHhcCC
Q 021783 300 KALRTGP 306 (307)
Q Consensus 300 ~~l~~~~ 306 (307)
+++++++
T Consensus 393 ~~~~~~~ 399 (407)
T PRK09064 393 EVWARLG 399 (407)
T ss_pred HHHHHcC
Confidence 7666554
No 201
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.89 E-value=2.8e-21 Score=170.69 Aligned_cols=254 Identities=17% Similarity=0.157 Sum_probs=164.4
Q ss_pred HHHHHhcC--CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC----CCceEEEEeCCCCCcccccc
Q 021783 5 AAVTHLLG--TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 5 ~~~~~~~~--~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~ 78 (307)
.++..+.+ +|+.|+.+...|.+... .++..|+++..++.+|++++++.++ +++++|++++++||+|.+.|
T Consensus 120 ~ai~~l~~~~~~~~v~~~~~~h~s~~~----~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~ 195 (402)
T TIGR01821 120 ATLATLAKIIPGCVIFSDELNHASMIE----GIRHSGAEKFIFRHNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAP 195 (402)
T ss_pred HHHHHhhCCCCCCEEEEcchHhHHHHH----HHHHcCCeEEEECCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC
Confidence 34444443 78888877777866663 3456788887888888888888775 36899999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcC-C----cc----CCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLS-R----PL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~-~----~~----~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
+++|.++|++||+++|+|++|+.|.+. . .. ....|++++|++|.+++ . +|+++++++ +.+.+....
T Consensus 196 l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~-~---GG~i~~~~~-~~~~l~~~~ 270 (402)
T TIGR01821 196 IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGV-V---GGYIAASRK-LIDAIRSYA 270 (402)
T ss_pred HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhcc-C---CceeecCHH-HHHHHHHhC
Confidence 999999999999999999999855431 1 11 12368999999999954 4 588887754 444444322
Q ss_pred Hh--cCCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 150 NA--EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 150 ~~--~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
.. .....++..+..+.++++.+ ....+...++.+.+.+.++... ++-. ...++++.
T Consensus 271 ~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~~~----------~~~~~i~~ 331 (402)
T TIGR01821 271 PGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALG---------IPVI----------PNPSHIVP 331 (402)
T ss_pred cCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcC---------CCcC----------CCCCCEEE
Confidence 21 12234444455555555433 2223344456666666665431 1111 11356777
Q ss_pred EEeCCHHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHH
Q 021783 225 FLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLD 299 (307)
Q Consensus 225 ~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~ 299 (307)
+.+++.+.+..+.+.|. .+||.++.... |.. ..+.+++|+|++. +|++++++.|+
T Consensus 332 i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~------p~~--------------~~g~~~lRis~~~~~t~edi~~~~~~l~ 391 (402)
T TIGR01821 332 VIIGDAALCKKVSDLLLNKHGIYVQPINY------PTV--------------PRGTERLRITPTPAHTDKMIDDLVEALL 391 (402)
T ss_pred EEeCCHHHHHHHHHHHHhcCCEEEEeECC------CCC--------------CCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 77765545677888875 45898765332 100 0123579999965 67777777777
Q ss_pred HHHhcCC
Q 021783 300 KALRTGP 306 (307)
Q Consensus 300 ~~l~~~~ 306 (307)
+++++++
T Consensus 392 ~~~~~~~ 398 (402)
T TIGR01821 392 LVWDRLG 398 (402)
T ss_pred HHHHHcC
Confidence 7776554
No 202
>PLN02368 alanine transaminase
Probab=99.89 E-value=2.9e-21 Score=169.32 Aligned_cols=160 Identities=13% Similarity=0.114 Sum_probs=118.2
Q ss_pred HHHHHhc-CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCC------CceEEEEeCCC
Q 021783 5 AAVTHLL-GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGP------WTKLVWVESPT 70 (307)
Q Consensus 5 ~~~~~~~-~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~------~~~~v~~~~~~ 70 (307)
.++.+++ +|||+|++++|+|+.+. ..++..|++++.++.+ |++++++.+++ +++++++++|+
T Consensus 145 ~~~~~l~~~pGd~Vli~~P~Y~~y~----~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~ 220 (407)
T PLN02368 145 QILNAVIRGEKDGVLVPVPQYPLYS----ATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPG 220 (407)
T ss_pred HHHHHHcCCCCCEEEEeCCCCccHH----HHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCC
Confidence 3445566 69999999999999988 6677889999998763 68899988863 78999999999
Q ss_pred CCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCc------CCc-------c----CCCccEEEeccccccccCCCce
Q 021783 71 NPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL------SRP-------L----ELGADIVMHSATKFIAGHSDVM 130 (307)
Q Consensus 71 n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~------~~~-------~----~~~~d~~~~s~~K~~~g~~g~~ 130 (307)
||||.+++ +++|+++|++||++||+|++|..-.+ ... . ..+..++++||||.+.+.+|+|
T Consensus 221 NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlR 300 (407)
T PLN02368 221 NPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQR 300 (407)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccc
Confidence 99999996 77888999999999999999964221 110 0 1236799999999986678999
Q ss_pred eEEEEE--cChhHHHHHHHHHHhcCCCCChhhHHHHhhccc
Q 021783 131 AGVLAV--KGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 169 (307)
Q Consensus 131 ~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (307)
+||+++ .++.+.+.+...... ....+...+.++...++
T Consensus 301 iGy~i~~~~~~~li~~~~~~~~~-~~~~~~~~Q~aa~~~l~ 340 (407)
T PLN02368 301 GGYFEMTNIPPKTVEEIYKVASI-ALSPNVSGQIFMGLMVN 340 (407)
T ss_pred eEEEEEeCCCHHHHHHHHHHhcc-cCCCCcHHHHHHHHHhC
Confidence 999995 234454545444322 22344455555555543
No 203
>PLN02822 serine palmitoyltransferase
Probab=99.89 E-value=5.8e-21 Score=170.93 Aligned_cols=257 Identities=13% Similarity=0.147 Sum_probs=167.5
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC---------CCc-eEEEEeCCCCCc
Q 021783 4 LAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG---------PWT-KLVWVESPTNPR 73 (307)
Q Consensus 4 l~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~---------~~~-~~v~~~~~~n~t 73 (307)
.+++.+++++||.|++....|.++. ..++..|.+++.++++|.++++..+. +++ ++|+++++++++
T Consensus 183 ~sai~a~~~~gd~Ii~d~~~H~s~~----~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~ 258 (481)
T PLN02822 183 FSVIPAFCKKGDIIVADEGVHWGIQ----NGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNS 258 (481)
T ss_pred HHHHHHhCCCCCEEEEeCCccHHHH----HHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCC
Confidence 3667778999999999988887765 44566788999999998877776653 234 789999999999
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccCCCCcCC----------ccCCCccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR----------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~----------~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
|.+.|+++|.++|++||+++|+||+|+.+.+.. ......|++++|++|.+ |.. +|+++++++ +.+
T Consensus 259 G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKal-g~~---GG~i~g~~~-ii~ 333 (481)
T PLN02822 259 GQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHAL-ATE---GGFCTGSAR-VVD 333 (481)
T ss_pred CCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhh-hhC---CeEEEcCHH-HHH
Confidence 999999999999999999999999998665421 11125789999999999 445 589988755 444
Q ss_pred HHHHHHHhcC--CCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 144 ELYFLQNAEG--SGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 144 ~~~~~~~~~~--~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
.+........ ...++..+..+..+++.+ ....+++.++.+.+.+.|++..++ .+. . ..
T Consensus 334 ~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~--------------~~~--~-~~ 396 (481)
T PLN02822 334 HQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGL--------------SIG--S-NT 396 (481)
T ss_pred HHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCc--------------ccC--C-CC
Confidence 4432221111 123344445544455433 234455566666666666543211 110 0 12
Q ss_pred CCceEEEEeCCH--------HHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-
Q 021783 219 AGSVLSFLTGSL--------ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI- 288 (307)
Q Consensus 219 ~~~~~~~~~~~~--------~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~- 288 (307)
.++++.+.+++. ....++.+.|. ++||.+..+.... .. .+..+..+|++++.
T Consensus 397 ~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~------~~------------~~~~~~~lRi~is~~ 458 (481)
T PLN02822 397 LSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRST------LD------------KCRLPVGIRLFVSAG 458 (481)
T ss_pred CCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCC------cC------------CCCCCCcEEEEECCC
Confidence 467777777531 22467777775 7799887653200 00 01113459999875
Q ss_pred ---CChHHHHHHHHHHHhc
Q 021783 289 ---EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 ---~~~~~~i~~l~~~l~~ 304 (307)
+++++.++.|++++.+
T Consensus 459 ~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 459 HTESDILKASESLKRVAAS 477 (481)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 5666666666666554
No 204
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.89 E-value=5.2e-21 Score=169.10 Aligned_cols=254 Identities=18% Similarity=0.189 Sum_probs=166.0
Q ss_pred HHHHHhcC--CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC----CCceEEEEeCCCCCcccccc
Q 021783 5 AAVTHLLG--TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 5 ~~~~~~~~--~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~ 78 (307)
+++..+.+ +||.|+++...|+++... ++..|++++.++.+|++++++.+. +++++|++++++|++|.+.|
T Consensus 120 ~ai~~l~~~~~g~~I~~~~~~H~s~~~~----~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~ 195 (406)
T PRK13393 120 AALSTLGSRLPGCVILSDELNHASMIEG----IRHSRAEKRIFRHNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAP 195 (406)
T ss_pred HHHHHhhcCCCCCEEEEccchhHHHHHH----HHHcCCeEEEeCCCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhC
Confidence 44444443 788888888888877744 345688888888888888887764 36789999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcC-Cc--------cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLS-RP--------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~-~~--------~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
+++|.++|+++|+++++|++|+.|.+. .. ...+.|++++|++|.++. . +|+++++++ +.+.+....
T Consensus 196 l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~-~---GG~~~~~~~-~~~~l~~~~ 270 (406)
T PRK13393 196 IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGV-M---GGYITGSAA-LCDFIRSFA 270 (406)
T ss_pred HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcc-c---CceeeCCHH-HHHHHHHhC
Confidence 999999999999999999999865532 11 111358899999999954 3 588887644 444444333
Q ss_pred Hh--cCCCCChhhHHHHhhccccHH---HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 150 NA--EGSGLAPFDCWICLRGVKTMA---LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 150 ~~--~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
.. .....++..+..+..+++.+. ...++..++.+.+.+.|+... ++.. ++.++++.
T Consensus 271 ~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~~~----------~~~~~i~~ 331 (406)
T PRK13393 271 SGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKAG---------IPHL----------PNPSHIVP 331 (406)
T ss_pred cCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC---------CCcC----------CCCCCeEE
Confidence 22 123344444445445554332 122334455566666665421 1111 12366777
Q ss_pred EEeCCHHHHHHHHhcCCc-ceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHH
Q 021783 225 FLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLD 299 (307)
Q Consensus 225 ~~~~~~~~~~~~~~~l~~-~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~ 299 (307)
+.+.+......+.+.|.+ +||.++.+.. |.. ..+.+++|+|++. +|++++++.|.
T Consensus 332 v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~------p~~--------------p~g~~~iRis~~~~~t~edid~l~~~l~ 391 (406)
T PRK13393 332 VMVGDPVLCKQISDELLDRYGIYVQPINY------PTV--------------PRGTERLRITPSPLHTDADIEHLVQALS 391 (406)
T ss_pred EEeCCHHHHHHHHHHHHHhCCEEEEeECC------CCC--------------CCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 766654456788888876 5998876432 110 0123579999975 67777777777
Q ss_pred HHHhcCC
Q 021783 300 KALRTGP 306 (307)
Q Consensus 300 ~~l~~~~ 306 (307)
+.+++++
T Consensus 392 ~~~~~~~ 398 (406)
T PRK13393 392 EIWARLG 398 (406)
T ss_pred HHHHhcC
Confidence 7766554
No 205
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.89 E-value=4.1e-21 Score=168.18 Aligned_cols=238 Identities=18% Similarity=0.121 Sum_probs=155.5
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHH
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 86 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~ 86 (307)
++||+|++++++|++.. ..++..|++++.++.+ |++++++++++++++|++++++|+||.+.|+++|.++|
T Consensus 102 ~~~~~vl~~~~~h~s~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~ 177 (371)
T PRK13520 102 AEKPNIVVPESAHFSFD----KAADMLGVELRRAPLDDDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDPIPELSKIA 177 (371)
T ss_pred CCCceEEecCcchHHHH----HHHHHcCceEEEecCCCCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHH
Confidence 36899999999997765 5667789999998863 89999999988888888888899999999999999999
Q ss_pred HHcCCEEEEeCccCCCCcC--------CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhc------
Q 021783 87 HAHGALLLVDNSIMSPVLS--------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE------ 152 (307)
Q Consensus 87 ~~~~~~li~D~a~~~~~~~--------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~------ 152 (307)
+++|+++++|++|+.+..+ +....++|.+++|++||..++.+ +|+++.+++...+.+.......
T Consensus 178 ~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~--~G~~~~~~~~~~~~l~~~~~~~~~~~~~ 255 (371)
T PRK13520 178 LENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIP--AGGILFRDESYLDALAVDTPYLTSKKQA 255 (371)
T ss_pred HHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCC--ceEEEEcCHHHHHhhcccCccccCCCCc
Confidence 9999999999999854321 11235789999999998754433 7777776554444332111110
Q ss_pred --CCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEE
Q 021783 153 --GSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 225 (307)
Q Consensus 153 --~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 225 (307)
.++.+......+..+++ .++...++..++++.+.+.+++. ++ ..... ...+++.+
T Consensus 256 ~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~----------------~~~~~v~~ 317 (371)
T PRK13520 256 TLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GF-EPVIE----------------PVLNIVAF 317 (371)
T ss_pred ceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CC-EEecC----------------CCceEEEE
Confidence 00111222222333332 23344556666666777766643 22 11110 02457777
Q ss_pred EeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHH
Q 021783 226 LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKA 301 (307)
Q Consensus 226 ~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~ 301 (307)
.+++ ..++.+.|..+||.++.+.. .+++|+|++. +|++++++.|++.
T Consensus 318 ~~~~---~~~v~~~L~~~gi~v~~~~~--------------------------~~~iRis~~~~~t~edi~~~~~~l~~~ 368 (371)
T PRK13520 318 DDPN---PDEVREKLRERGWRVSVTRC--------------------------PEALRIVCMPHVTREHIENFLEDLKEV 368 (371)
T ss_pred ecCC---HHHHHHHHHHCCceeccCCC--------------------------CCEEEEEEECCCCHHHHHHHHHHHHHH
Confidence 7662 56777777777887765321 3459999975 4555555555444
Q ss_pred H
Q 021783 302 L 302 (307)
Q Consensus 302 l 302 (307)
+
T Consensus 369 ~ 369 (371)
T PRK13520 369 K 369 (371)
T ss_pred h
Confidence 3
No 206
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.89 E-value=1.6e-20 Score=164.00 Aligned_cols=269 Identities=14% Similarity=0.147 Sum_probs=168.6
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 83 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~ 83 (307)
.+++||+|+++.++|+++. ..+...|++++.++.+ |++++++.+++++++|+++| ++|...++++|.
T Consensus 67 ~~~~Gd~Viv~~~t~~~~~----~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~~~~i~ 139 (375)
T PRK11706 67 DIQPGDEVIMPSYTFVSTA----NAFVLRGAKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPVH---YAGVACEMDTIM 139 (375)
T ss_pred CCCCCCEEEECCCCcHHHH----HHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCCCCeEEEEeC---CCCCccCHHHHH
Confidence 3689999999999999888 5567789999999863 68999999998999999764 689999999999
Q ss_pred HHHHHcCCEEEEeCccCCCCcCCcc--CCCccEEEeccc--cccccCCCceeEEEEEcChhHHHHHHHHHHhc-------
Q 021783 84 EMAHAHGALLLVDNSIMSPVLSRPL--ELGADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNAE------- 152 (307)
Q Consensus 84 ~~~~~~~~~li~D~a~~~~~~~~~~--~~~~d~~~~s~~--K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~------- 152 (307)
++|+++|+++|+|++|+.+...+.. ....|+.++||+ |.+. ++. +|+++++++.+.+.+.......
T Consensus 140 ~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~K~l~-~g~--gG~~~~~~~~~~~~~~~~~~~g~~~~~~~ 216 (375)
T PRK11706 140 ALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETKNYT-AGE--GGALLINDPALIERAEIIREKGTNRSQFF 216 (375)
T ss_pred HHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCCcccc-ccC--CeEEEECCHHHHHHHHHHHHcCCCcchhh
Confidence 9999999999999999987632222 222478888887 9984 333 5666677676766555444321
Q ss_pred ------------C--CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 153 ------------G--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 153 ------------~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+ ..+....+.+....++.++...++..++++.+.+.|...+....+..+.... + ...
T Consensus 217 ~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~--~-------~~~ 287 (375)
T PRK11706 217 RGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPD--D-------CKH 287 (375)
T ss_pred ccCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCC--C-------Cce
Confidence 1 1123345555555566665555556666666666665443110111111100 0 001
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccC----CCCCcHHHHHhcCCCCCeEEEEecc----CC
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS----HASIPVEVRQARGLTEDLVRISVGI----ED 290 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~----~~~~~~~~~~~~~~~~~~iRis~~~----~~ 290 (307)
...++++.+++.....++.+.|..+||.++.... .+...|.... ...+|..... .++.+-+.++. +|
T Consensus 288 ~~~~~~~~~~~~~~r~~l~~~L~~~gI~~~~~~~-p~~~~~~~~~~~~~~~~~p~a~~~----~~~~l~lP~~~~l~~~~ 362 (375)
T PRK11706 288 NAHMFYIKLRDLEDRSALINFLKEAGIMAVFHYI-PLHSSPAGERFGRFHGEDRYTTKE----SERLLRLPLFYNLTDVE 362 (375)
T ss_pred eeEEEEEEECCcCCHHHHHHHHHHCCCCccccCC-ccCcchhhHhcCCCCCCChHHHHH----HhCcEeccCCCCCCHHH
Confidence 1335556665444588999999999998875432 2222222111 1123333222 23446665543 56
Q ss_pred hHHHHHHHHHHH
Q 021783 291 VNDLISDLDKAL 302 (307)
Q Consensus 291 ~~~~i~~l~~~l 302 (307)
++++++.+++++
T Consensus 363 ~~~i~~~i~~~~ 374 (375)
T PRK11706 363 QRTVIDTILEFF 374 (375)
T ss_pred HHHHHHHHHHHh
Confidence 666666666543
No 207
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.89 E-value=6.4e-21 Score=168.46 Aligned_cols=131 Identities=24% Similarity=0.270 Sum_probs=108.0
Q ss_pred HhcCC--CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccH-H
Q 021783 9 HLLGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDI-R 80 (307)
Q Consensus 9 ~~~~~--gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~-~ 80 (307)
+.+.+ ||+|+++++.|+++...+....+..|++++.++.+ |++++++++.+++++|++++++ ++|.+.+. +
T Consensus 101 ~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~ 179 (398)
T cd00613 101 AIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPN-TLGVFEDLIK 179 (398)
T ss_pred HHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCCeEEEEEECCC-CCceecchHH
Confidence 34565 99999999999999877766556667999988874 6799999999899999999985 89999885 9
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCC---CceeEEEEEcChhH
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHS---DVMAGVLAVKGERL 141 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~---g~~~G~~~~~~~~~ 141 (307)
+|.++|++||+++|+|++|+.+... ....+++|++++|+||++ +|. |-++|+++.+++..
T Consensus 180 ~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~~~ 243 (398)
T cd00613 180 EIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKELV 243 (398)
T ss_pred HHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccccC-CCCCCCCCceeEEEEhhhhH
Confidence 9999999999999999998765543 556678999999999998 442 33489999986543
No 208
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.88 E-value=2.4e-22 Score=174.26 Aligned_cols=225 Identities=17% Similarity=0.145 Sum_probs=156.6
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC------CceEEEEeCCCCCccccccHHHH
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP------WTKLVWVESPTNPRQQICDIRKI 82 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~~~~l 82 (307)
+++|++++++|.++. ..++..|++++.++.+ |++++++.+.+ +++++++++++||||.+.|+++|
T Consensus 95 ~~~v~~~~~~h~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i 170 (345)
T cd06450 95 KLVIVCSDQAHVSVE----KAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEI 170 (345)
T ss_pred CeEEEEcCcchhHHH----HHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHH
Confidence 348899999998876 4455568899888853 78999999876 78899999999999999999999
Q ss_pred HHHHHHcCCEEEEeCccCCCCcCCc-------cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCC
Q 021783 83 AEMAHAHGALLLVDNSIMSPVLSRP-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 155 (307)
Q Consensus 83 ~~~~~~~~~~li~D~a~~~~~~~~~-------~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~ 155 (307)
.++|+++|+++++|++|+.+..+.. ...++|++++|+||++++|.| +|+++.+
T Consensus 171 ~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g--~g~~~~~------------------ 230 (345)
T cd06450 171 ADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLG--CSAVLVR------------------ 230 (345)
T ss_pred HHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcc--hHHHHHH------------------
Confidence 9999999999999999987664311 112689999999999877766 7887766
Q ss_pred CChhhHHHHhhcc--ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC----
Q 021783 156 LAPFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---- 229 (307)
Q Consensus 156 ~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---- 229 (307)
....+.....+ ..++.+.++..+.++.+.+.+++.+.+. +.. ....+++.|.+.+
T Consensus 231 --~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~----------------~~~~~iv~f~~~~~~~~ 291 (345)
T cd06450 231 --ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFE-LLG----------------EPNLSLVCFRLKPSVKL 291 (345)
T ss_pred --HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-Eec----------------CCceeEEEEEECCcchh
Confidence 11122222111 2334555666677777777777654331 110 0135688888865
Q ss_pred HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccC-ChHHHHHHHHHHHhc
Q 021783 230 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE-DVNDLISDLDKALRT 304 (307)
Q Consensus 230 ~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~-~~~~~i~~l~~~l~~ 304 (307)
.....++.+.|.++|+.+..+..+ + .++++|+|++.. +.++.++.|.++|++
T Consensus 292 ~~~~~~i~~~L~~~g~~~~~~~~~----------------------~-~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 292 DELNYDLSDRLNERGGWHVPATTL----------------------G-GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred hHHHHHHHHHHHhcCCEEEEeeEE----------------------C-CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 233667888887775533222110 0 245699999875 477778888777764
No 209
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.88 E-value=9.8e-21 Score=167.45 Aligned_cols=260 Identities=21% Similarity=0.219 Sum_probs=162.6
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHh-hhcccCCcEEEEecC--C------ChHHHHhhcC-CCceEEEEeCCCCCcc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLS-RVTPKTGVVVKRVNT--C------DLDEVASAIG-PWTKLVWVESPTNPRQ 74 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~-~~~~~~g~~~~~v~~--~------d~~~l~~~l~-~~~~~v~~~~~~n~tG 74 (307)
.++.++++|||+|++++|+|+++...+. ..++..|.+++.++. + |++++++.+. ++++++++++++| |
T Consensus 96 ~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~--~ 173 (402)
T cd00378 96 AVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAY--P 173 (402)
T ss_pred HHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCccc--C
Confidence 5566788999999999999977653211 125567876655543 2 8999999985 6899999888776 4
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccCCCCc-----CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
...|+++|.++|+++|+++|+|++|..+.. ..... +.|++++|+||++.|++ +|+++++++.+.+.+....
T Consensus 174 ~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~dv~~~s~sK~l~G~~---gg~i~~~~~~~~~~l~~~~ 249 (402)
T cd00378 174 RPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GADVVTTTTHKTLRGPR---GGLILTRKGELAKKINSAV 249 (402)
T ss_pred CCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCcEEEeccccCCCCCC---ceEEEeccHHHHHHHHHHh
Confidence 667999999999999999999999865432 22223 67999999999996554 7888888745555554433
Q ss_pred Hhc-CCCCChhhHHH-H---hhccc-cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceE
Q 021783 150 NAE-GSGLAPFDCWI-C---LRGVK-TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 223 (307)
Q Consensus 150 ~~~-~~~~~~~~~~~-~---~~~l~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 223 (307)
... .+......... . ....+ ....+.+++.++.+.+.+.|++. ++ .+.. . ...++++
T Consensus 250 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~--------------~-~~~~~~v 312 (402)
T cd00378 250 FPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GF-KVVS--------------G-GTDNHLV 312 (402)
T ss_pred CccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CC-eEee--------------c-CCCCeEE
Confidence 211 11111111111 1 11112 33445566677777777777654 22 1100 0 1136677
Q ss_pred EEEeCC-HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--------CChHHH
Q 021783 224 SFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--------EDVNDL 294 (307)
Q Consensus 224 ~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--------~~~~~~ 294 (307)
++.+++ ......+.+.+...||.+..+.. |.... .....+++|++++. +|++++
T Consensus 313 ~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~------p~~~~-----------~~~~~~~lRi~~~~~~~~~~~~~di~~~ 375 (402)
T cd00378 313 LVDLRPKGITGKAAEDALEEAGITVNKNTL------PWDPS-----------SPFVPSGIRIGTPAMTTRGMGEEEMEEI 375 (402)
T ss_pred EEeCCccCCCHHHHHHHHHHcCcEEcCCcC------CCCCC-----------CCCCCCeeEecCHHHHHhCCCHHHHHHH
Confidence 777752 11245666667778998876332 10000 01124579998853 677777
Q ss_pred HHHHHHHHhc
Q 021783 295 ISDLDKALRT 304 (307)
Q Consensus 295 i~~l~~~l~~ 304 (307)
++.|.+.++.
T Consensus 376 ~~~l~~~~~~ 385 (402)
T cd00378 376 ADFIARALKD 385 (402)
T ss_pred HHHHHHHHhc
Confidence 8877776643
No 210
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.88 E-value=5.8e-21 Score=167.33 Aligned_cols=240 Identities=16% Similarity=0.077 Sum_probs=156.2
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHH
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 86 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~ 86 (307)
++||+|++++++|.++. ..++..|++++.++.+ |++++++.+++++..+++.+++||||...|+++|.++|
T Consensus 104 ~~g~~vl~~~~~h~~~~----~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~ 179 (373)
T TIGR03812 104 KRTPNIIVPESAHFSFE----KAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIA 179 (373)
T ss_pred CCCcEEEECCcchHHHH----HHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHH
Confidence 47799999999998765 5677889999999863 89999999987775555555789999999999999999
Q ss_pred HHcCCEEEEeCccCCCCc----------C-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCC-
Q 021783 87 HAHGALLLVDNSIMSPVL----------S-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS- 154 (307)
Q Consensus 87 ~~~~~~li~D~a~~~~~~----------~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~- 154 (307)
+++|+++|+|++|+.+.. . +....+.|.+++|+|||..++.+ +|+++..++...+.+.....+...
T Consensus 180 ~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~--~G~~~~~~~~~~~~l~~~~~~~~~~ 257 (373)
T TIGR03812 180 LENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIP--AGGILFRSKSYLKYLSVDAPYLTVK 257 (373)
T ss_pred HHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCC--ceEEEEeCHHHHhhhcccCcccCCC
Confidence 999999999999974432 1 22224789999999997544433 555554434443333211111110
Q ss_pred -------CCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCce
Q 021783 155 -------GLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 222 (307)
Q Consensus 155 -------~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 222 (307)
+.+......+...++ .++...++..++++.+.+.|++.... .+ .+ ...++
T Consensus 258 ~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~-~~-~~----------------~~~~~ 319 (373)
T TIGR03812 258 KQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFE-PV-IE----------------PVLNI 319 (373)
T ss_pred CCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCe-EE-cC----------------CCceE
Confidence 111122222222332 22334566666777777777654210 01 11 12457
Q ss_pred EEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHH
Q 021783 223 LSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 302 (307)
Q Consensus 223 ~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l 302 (307)
+.+.+++ ...+.+.|..+||.++.+. .++++|+|++....++.++.|.++|
T Consensus 320 v~~~~~~---~~~v~~~L~~~gi~v~~~~--------------------------~~~~iRis~~~~~t~edid~l~~~L 370 (373)
T TIGR03812 320 VAFEVDD---PEEVRKKLRDRGWYVSVTR--------------------------CPKALRIVVMPHVTREHIEEFLEDL 370 (373)
T ss_pred EEEEeCC---HHHHHHHHHHCCceeccCC--------------------------CCCEEEEEEECCCCHHHHHHHHHHH
Confidence 7777664 3467777777888776532 1346999998777777777777777
Q ss_pred hc
Q 021783 303 RT 304 (307)
Q Consensus 303 ~~ 304 (307)
++
T Consensus 371 ~~ 372 (373)
T TIGR03812 371 KE 372 (373)
T ss_pred hh
Confidence 64
No 211
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.88 E-value=1.6e-20 Score=164.10 Aligned_cols=274 Identities=18% Similarity=0.192 Sum_probs=168.9
Q ss_pred cHH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 2 AAL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 2 aal-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
+|+ .++.++ +++||+|++++++|+++. ..+...|++++.+|.+ |++++++.++++|++|+ ++|++
T Consensus 59 ~al~lal~al~~~~Gd~Viv~~~~~~~~~----~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~---~~~~~ 131 (379)
T PRK11658 59 AGMHITLMALGIGPGDEVITPSLTWVSTL----NMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAII---PVHYA 131 (379)
T ss_pred HHHHHHHHHcCCCCCCEEEECCCcHHHHH----HHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccCCeEEE---EeCCC
Confidence 455 455556 789999999999999887 4556789999999863 78999999999999987 45679
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccCCCCcC---CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIMSPVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 150 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~ 150 (307)
|...|+++|.++|+++|+++|+|++|+.|... ....+|.++++++.+|.+.+. .+|+++++++.+.+.+.....
T Consensus 132 G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l~~g---~GG~v~~~~~~~~~~~~~~~~ 208 (379)
T PRK11658 132 GAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIKNITCA---EGGLVVTDDDELADRLRSLKF 208 (379)
T ss_pred CCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCCCCcCccc---CceEEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999987654 244556666677777877543 378888887777665554332
Q ss_pred hc----------------------C--CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCC
Q 021783 151 AE----------------------G--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 206 (307)
Q Consensus 151 ~~----------------------~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~ 206 (307)
.. | ..++.+.+.+....++.++...++..++++.+.+.|+..+.. .+..+. .
T Consensus 209 ~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~-~~~~~~---~ 284 (379)
T PRK11658 209 HGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQ-PLSLPA---W 284 (379)
T ss_pred cCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-cCcCCC---C
Confidence 11 1 112334455555555555555555555555555655543210 000000 0
Q ss_pred CchHHHhhhccCCCceEEEEeCCH---HHHHHHHhcCCcceeecCCCCccceeecccccC---CCCCcHHHHHhcCCCCC
Q 021783 207 PGHELHYSQAKGAGSVLSFLTGSL---ALSKHVVETTKYFSITVSFGSVKSLISMPCFMS---HASIPVEVRQARGLTED 280 (307)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~ 280 (307)
.......++.+.++.. ...+.+.+.|+.+||.++.... .....|.... ...+|..... .+.
T Consensus 285 --------~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~----~~~ 351 (379)
T PRK11658 285 --------PHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHFR-AAHTQKYYRERFPTLSLPNTEWN----SER 351 (379)
T ss_pred --------CCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccCc-CcccChhhhccCCCCCChHHHHH----HhC
Confidence 0000113445555421 2377888889889997654321 2222332111 1122222111 234
Q ss_pred eEEEEecc----CChHHHHHHHHHHH
Q 021783 281 LVRISVGI----EDVNDLISDLDKAL 302 (307)
Q Consensus 281 ~iRis~~~----~~~~~~i~~l~~~l 302 (307)
.+-+.++. ++++++++.+++++
T Consensus 352 ~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 352 ICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred eEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 46666653 56666666666554
No 212
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.88 E-value=1.8e-20 Score=156.39 Aligned_cols=269 Identities=16% Similarity=0.146 Sum_probs=167.7
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcC---------CCceEEEEe-CCC
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIG---------PWTKLVWVE-SPT 70 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~---------~~~~~v~~~-~~~ 70 (307)
-++..+++.||.|++..++|++.. +..+..|++++.|+++ ++|.|++.+. +++++++.- ..+
T Consensus 139 ~~l~~~~N~gd~vlie~~ty~~AL----~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgq 214 (472)
T KOG0634|consen 139 KVLRTLINRGDHVLIEEYTYPSAL----QSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQ 214 (472)
T ss_pred HHHHHhhcCCCceEEecccchHHH----HhccccCceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCC
Confidence 355568999999999999998888 7788999999999986 7888887775 236666644 789
Q ss_pred CCcccccc---HHHHHHHHHHcCCEEEEeCccCC---------------------------CCcCCccCCCccEEEeccc
Q 021783 71 NPRQQICD---IRKIAEMAHAHGALLLVDNSIMS---------------------------PVLSRPLELGADIVMHSAT 120 (307)
Q Consensus 71 n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~---------------------------~~~~~~~~~~~d~~~~s~~ 120 (307)
||||..++ .++|.++|++|++++|+|+.|.. +.+...+..|.++-..|||
T Consensus 215 NPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFS 294 (472)
T KOG0634|consen 215 NPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFS 294 (472)
T ss_pred CCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchh
Confidence 99999986 78999999999999999999841 0111333457889999999
Q ss_pred cccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCc-cEEe
Q 021783 121 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRV-KKVN 199 (307)
Q Consensus 121 K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~ 199 (307)
|.++ +|+|.||+.+++..+.+.+.... .....++...+....+.++.... +...+..+.++..+..++.. ....
T Consensus 295 Kiia--PGlRlG~it~~~~~l~ril~~ae-~~t~~pSg~sq~iv~a~l~~wgq--eG~~~wi~~l~~~Yt~Rrn~~l~Al 369 (472)
T KOG0634|consen 295 KIIA--PGLRLGWITGNSLFLKRILDLAE-VATSGPSGFSQGIVYAMLKRWGQ--EGFLRWIQHLRSSYTERRNALLSAL 369 (472)
T ss_pred hhhc--CcceeEEeecCHHHHHHHhhhcc-eeecCcccccHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9994 69999999998665555444333 23333444444444433332211 11122222222222221100 0000
Q ss_pred cCCCCCCCch-HHHhhhccCCCceEEEEeC--------CHHHHHHH-HhcCCcceeecCCCCccceeecccccCCCCCcH
Q 021783 200 YAGLPEHPGH-ELHYSQAKGAGSVLSFLTG--------SLALSKHV-VETTKYFSITVSFGSVKSLISMPCFMSHASIPV 269 (307)
Q Consensus 200 ~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~~~~~-~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~ 269 (307)
+..+ |.- ..+.+ ...|.++|++++ +.++.+++ ...+..+||.+..|..|... |....
T Consensus 370 ~kyl---p~~~~~~~~--P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~--p~~s~------ 436 (472)
T KOG0634|consen 370 DKYL---PKSVCEYHP--PKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVD--PESSW------ 436 (472)
T ss_pred HHhC---CCCeeEEec--CCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEc--CccCC------
Confidence 0001 111 11111 224778888883 45544444 44466789999999987654 21110
Q ss_pred HHHHhcCCCCCeEEEEeccC---ChHHHHHHHHHHHh
Q 021783 270 EVRQARGLTEDLVRISVGIE---DVNDLISDLDKALR 303 (307)
Q Consensus 270 ~~~~~~~~~~~~iRis~~~~---~~~~~i~~l~~~l~ 303 (307)
++-++|+|++.. +.++.+++|...++
T Consensus 437 --------~kiffRls~a~a~~e~l~~g~~rf~~~ik 465 (472)
T KOG0634|consen 437 --------SKIFFRLSIAFAEPEKLDEGIERFGSVIK 465 (472)
T ss_pred --------CcceEEEEeecCCHHHHHHHHHHHHHHHH
Confidence 124799999874 44455555555554
No 213
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.88 E-value=4.1e-21 Score=169.12 Aligned_cols=188 Identities=22% Similarity=0.293 Sum_probs=146.1
Q ss_pred CcHHHHHHHhcCCCCeEEEcCCCCc---chHHHHhhhcccCCcEEEEecC---CChHHHHhhcCCCceEEEEeCCCCCc-
Q 021783 1 MAALAAVTHLLGTGEEIVAGDDLYG---GTDRLLSRVTPKTGVVVKRVNT---CDLDEVASAIGPWTKLVWVESPTNPR- 73 (307)
Q Consensus 1 ~aal~~~~~~~~~gd~Vlv~~~~~~---~~~~~~~~~~~~~g~~~~~v~~---~d~~~l~~~l~~~~~~v~~~~~~n~t- 73 (307)
|+|+.+++..+.+||+|++++.+|. +.... ...++..|+++++++. .++++++++++++|+++++++++|++
T Consensus 147 ~aAi~l~l~~l~~GdeVIvs~~e~v~~ggs~~i-~~~~~~~G~~~~~v~~~~~~~l~dle~aI~~~T~lv~~~h~sN~~~ 225 (454)
T TIGR00474 147 AAAVLLALNTLAKGKEVIVSRGELVEIGGSFRI-PDVMEQSGAKLVEVGTTNRTHLKDYEDAITENTALLLKVHTSNYRI 225 (454)
T ss_pred HHHHHHHHHHhCCcCEEEECCChhhhhcchhhH-HHHHHHcCCEEEEeCCCCCCCHHHHHHhcCcCCEEEEEEccCcccc
Confidence 3566545566799999999998753 22222 2456778999999987 47899999999999999999999984
Q ss_pred -c--ccccHHHHHHHHHHcCCEEEEeCccC---------CCC---cCCccCCCccEEEeccccccccCCCceeEEEEEcC
Q 021783 74 -Q--QICDIRKIAEMAHAHGALLLVDNSIM---------SPV---LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKG 138 (307)
Q Consensus 74 -G--~~~~~~~l~~~~~~~~~~li~D~a~~---------~~~---~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~ 138 (307)
| ...|+++|+++||+||+++++|.+.+ .+. ..++.++|+|++++|.+|+++||. +|++++++
T Consensus 226 ~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~---~G~i~g~~ 302 (454)
T TIGR00474 226 VGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ---AGIIVGKK 302 (454)
T ss_pred cCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCe---EEEEEECH
Confidence 6 47899999999999999999998632 111 124556799999999999998774 89999987
Q ss_pred hhHHH--------HHH-------HHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcC
Q 021783 139 ERLAK--------ELY-------FLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 139 ~~~~~--------~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
+.+.. .++ .+....+.++.+..+|....+++.+..+++++.++++.+.++|+..
T Consensus 303 ~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~ 371 (454)
T TIGR00474 303 ELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAA 371 (454)
T ss_pred HHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhh
Confidence 65521 122 2233445566777888889999999999999999999999999874
No 214
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.88 E-value=4.8e-21 Score=166.58 Aligned_cols=275 Identities=21% Similarity=0.240 Sum_probs=179.8
Q ss_pred cHH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 2 AAL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 2 aal-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
+|+ .++.++ +++||+|++|..+|.++. ..+...|++++++|.+ |++++++.++++|++|+++| ..
T Consensus 51 ~Al~~al~~l~~~~gdeVi~p~~t~~~~~----~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~h---~~ 123 (363)
T PF01041_consen 51 SALHLALRALGLGPGDEVIVPAYTFPATA----SAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVVH---LF 123 (363)
T ss_dssp HHHHHHHHHTTGGTTSEEEEESSS-THHH----HHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE----GG
T ss_pred HHHHHHHHhcCCCcCceEecCCCcchHHH----HHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEec---CC
Confidence 456 444443 679999999999999998 6677899999999984 89999999999999999764 56
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccCCCCcCCc---cCCCccEEEeccc--cccccCCCceeEEEEEcChhHHHHHHHH
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP---LELGADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFL 148 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~---~~~~~d~~~~s~~--K~~~g~~g~~~G~~~~~~~~~~~~~~~~ 148 (307)
|..+|+++|.++|+++|++||+|++|+.|..... ..+ .|+.++||+ |.+. ..+ +|+++++++.+.+.+..+
T Consensus 124 G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~-gd~~~fSf~~~K~i~-~ge--GG~v~~~~~~~~~~~~~~ 199 (363)
T PF01041_consen 124 GNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSF-GDIAIFSFHPTKIIT-TGE--GGAVVTNDPELAERARAL 199 (363)
T ss_dssp GB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSS-SSEEEEESSTTSSS--SSS---EEEEESTHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCC-CCceEecCCCCCCCc-CCC--CeeEEecHHHHHHHhhhh
Confidence 8999999999999999999999999998875433 233 499999984 8773 333 899999999888877765
Q ss_pred HHhc-----------------CCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHH
Q 021783 149 QNAE-----------------GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 211 (307)
Q Consensus 149 ~~~~-----------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~ 211 (307)
.... ...++.+.+.+....|+.++...+...++++.+.+.|...+.+.....+.-.+
T Consensus 200 ~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~------ 273 (363)
T PF01041_consen 200 RNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAE------ 273 (363)
T ss_dssp TBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTE------
T ss_pred hccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccc------
Confidence 4322 12466678888888899998888888999999999998776442221111000
Q ss_pred HhhhccCCCceEEEEeCCH--HHHHHHHhcCCcceeecCCCCccceeecccccCC-----CCCcHHHHHhcCCCCCeEEE
Q 021783 212 HYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH-----ASIPVEVRQARGLTEDLVRI 284 (307)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~iRi 284 (307)
+.....+.+.+++. ...+.+.+.|...||.++......+...|....+ ..++...... +..+-+
T Consensus 274 -----~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~----~r~l~L 344 (363)
T PF01041_consen 274 -----RSSYYRFPIRLPDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLS----QRLLSL 344 (363)
T ss_dssp -----EBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHH----HHEEEE
T ss_pred -----ccccccccccccccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHH----hCeEEC
Confidence 01123445556543 2378899999999998887553222222322111 1233332221 344777
Q ss_pred EeccCChHHHHHHHHHHH
Q 021783 285 SVGIEDVNDLISDLDKAL 302 (307)
Q Consensus 285 s~~~~~~~~~i~~l~~~l 302 (307)
.....-.++.++.+.+++
T Consensus 345 P~~~~lt~edv~~I~~~i 362 (363)
T PF01041_consen 345 PIHPRLTEEDVDYIAEAI 362 (363)
T ss_dssp EHSTTSCHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHhhcc
Confidence 776544455555555554
No 215
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.88 E-value=1.4e-20 Score=162.81 Aligned_cols=248 Identities=16% Similarity=0.135 Sum_probs=158.1
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC----CChHHHHhhcCC-------CceEEEEeCCCCCc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----CDLDEVASAIGP-------WTKLVWVESPTNPR 73 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~----~d~~~l~~~l~~-------~~~~v~~~~~~n~t 73 (307)
.++.+++++||+|++++++|.+....+ ..+...|++++.++. .|++++++++++ ++++|++++|+||
T Consensus 62 ~~~~~l~~~gd~v~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~- 139 (338)
T cd06502 62 LALAAHTQPGGSVICHETAHIYTDEAG-APEFLSGVKLLPVPGENGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG- 139 (338)
T ss_pred HHHHHhcCCCCeEEEecCcceeeecCC-cHHHHcCceEEeecCCCCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-
Confidence 455567899999999999997654211 123447999999987 378999999864 7899999999997
Q ss_pred ccc---ccHHHHHHHHHHcCCEEEEeCccCCCC-----cC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHH
Q 021783 74 QQI---CDIRKIAEMAHAHGALLLVDNSIMSPV-----LS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 144 (307)
Q Consensus 74 G~~---~~~~~l~~~~~~~~~~li~D~a~~~~~-----~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~ 144 (307)
|.. .++++|.++|+++|+++|+|++|..+. .. .....+.|+++.|+||+++. +| +++++.+ +.+.+.
T Consensus 140 g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~-~~--g~~~~~~-~~~~~~ 215 (338)
T cd06502 140 GTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGA-PV--GAVVVGN-RDFIAR 215 (338)
T ss_pred ccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCC-cc--ceEEECC-HHHHHH
Confidence 544 357889999999999999999974221 11 11124688999999999954 44 4545555 445554
Q ss_pred HHHHHHhcC--CCCChhhHHHHhhcccc--HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCC
Q 021783 145 LYFLQNAEG--SGLAPFDCWICLRGVKT--MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 220 (307)
Q Consensus 145 ~~~~~~~~~--~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 220 (307)
+.......+ ...+...+..+..+++. +..+.++..++.+.+.+.|++.+. ... ....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~---------~~~----------~~~~ 276 (338)
T cd06502 216 ARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELGG---------LES----------EVQT 276 (338)
T ss_pred HHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCC---------Ccc----------cccC
Confidence 444332222 22334445555555543 444556666777777777775431 000 1135
Q ss_pred ceEEEEeC-CHHHHHHHHhcCC---cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHH
Q 021783 221 SVLSFLTG-SLALSKHVVETTK---YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLIS 296 (307)
Q Consensus 221 ~~~~~~~~-~~~~~~~~~~~l~---~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~ 296 (307)
+++.+.++ +......+.+++. .+|+.+.... .+++|++++....++.++
T Consensus 277 ~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~~~---------------------------~~~lRi~~~~~~~~~~i~ 329 (338)
T cd06502 277 NIVLLDPVEANAVFVELSKEAIERRGEGVLFYAWG---------------------------EGGVRFVTHWDTTEEDVD 329 (338)
T ss_pred CeEEEecCCccHHHHHHHHHHHHhhhCCEEEEecC---------------------------CCeEEEEeecCCCHHHHH
Confidence 66666664 3233445554442 4566543211 145999999876777777
Q ss_pred HHHHHHhc
Q 021783 297 DLDKALRT 304 (307)
Q Consensus 297 ~l~~~l~~ 304 (307)
.+.++++.
T Consensus 330 ~~~~~l~~ 337 (338)
T cd06502 330 ELLSALKA 337 (338)
T ss_pred HHHHHHhc
Confidence 77776654
No 216
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.87 E-value=6.8e-21 Score=166.22 Aligned_cols=246 Identities=17% Similarity=0.232 Sum_probs=148.0
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC------CCceEEEEeCCCCCcccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~------~~~~~v~~~~~~n~tG~~~~ 78 (307)
+++..+.++||.|+++...|.+....+... .+.. +.++.+|++++++.++ +++.+|++++++|++|.+.|
T Consensus 86 ~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~---~~~~-~~~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p 161 (370)
T PRK05937 86 GLCAHLSSVTDYVLWDEQVHISVVYSLSVI---SGWH-QSFRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP 161 (370)
T ss_pred HHHHHhCCCCCEEEEEhhhhHHHHHHHHHc---CCce-EEecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC
Confidence 333344578899999999998888665431 2333 4467789999999886 34667788999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcC-Ccc----CCC---ccEEEeccccccccCCCceeEEEEEcChhHHHHHHH-HH
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLS-RPL----ELG---ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-LQ 149 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~----~~~---~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~-~~ 149 (307)
+++|.++|+++|+++++|++|+.|.+. +.. .++ .++.+.|++|.+ |+.| +|++. .++ ....+.. ..
T Consensus 162 l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G--~~vl~-~~~-~~~~~~~~~~ 236 (370)
T PRK05937 162 LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMG--AALLS-SSE-VKQDLMLNSP 236 (370)
T ss_pred HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCc--eEEEc-CHH-HHHHHHHhCC
Confidence 999999999999999999999987654 321 233 246789999999 5666 55544 433 2222221 11
Q ss_pred Hh-cCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC
Q 021783 150 NA-EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 228 (307)
Q Consensus 150 ~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (307)
.. ...+.++........+++.+....+...+..+.+.+++... +... ..+....+.++
T Consensus 237 ~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~----------l~~~-----------~~~~~~~i~~~ 295 (370)
T PRK05937 237 PLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQK----------FSSA-----------APGCVQPIFLP 295 (370)
T ss_pred CCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh----------cCCC-----------CCCCEEEEEeC
Confidence 11 11223333333333444433221122233344444444322 1100 01112334555
Q ss_pred CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 229 SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 229 ~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+.+ ...+.+.|..+||.++. .+.| ..+++|+|++. +|++++++.|.+.+++
T Consensus 296 ~~~-~~~~~~~L~~~gi~v~~------~~~~------------------~~~~iRis~~~~~t~edid~l~~~L~~~~~~ 350 (370)
T PRK05937 296 GIS-EQELYSKLVETGIRVGV------VCFP------------------TGPFLRVNLHAFNTEDEVDILVSVLATYLEK 350 (370)
T ss_pred Chh-HHHHHHHHHHCCeeEEe------eCCC------------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 544 56788888888997753 1112 13469999976 5566666666555544
Q ss_pred C
Q 021783 305 G 305 (307)
Q Consensus 305 ~ 305 (307)
+
T Consensus 351 ~ 351 (370)
T PRK05937 351 Y 351 (370)
T ss_pred h
Confidence 3
No 217
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.87 E-value=1.3e-20 Score=148.03 Aligned_cols=253 Identities=19% Similarity=0.186 Sum_probs=177.7
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcC-------CCceEEEEeCCC
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG-------PWTKLVWVESPT 70 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~-------~~~~~v~~~~~~ 70 (307)
++..+++++||.|++...+|.+++ .++++.|.++..+|.. +++...+.+. ..+.+.+++|+.
T Consensus 91 avMhal~~~gd~vV~D~~aHYtty----vAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~D 166 (382)
T COG1103 91 AVMHALCKEGDWVVVDSLAHYTTY----VAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVD 166 (382)
T ss_pred HHHHHhccCCCEEEEcCcchHHHH----HHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccC
Confidence 344568999999999999999998 7789999999999963 5666555553 347899999999
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 71 NPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 71 n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
...|++.|.++++++|+++|++++..+||..|.++ +..+.|+|++++|.||.++.... +|++..+.+.....++...
T Consensus 167 g~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmAAs~P--iGvl~~~eE~ae~V~r~Sg 244 (382)
T COG1103 167 GEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMAASAP--IGVLAMSEEWAEIVLRRSG 244 (382)
T ss_pred CCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEecCccchhccCC--eeEEeehhHHHHHHHhhcc
Confidence 99999999999999999999999999999999998 88889999999999999865444 9999998665444444432
Q ss_pred H--------hcCCCCChhhHHHHhhccccHHHHHHHHHH---HHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 150 N--------AEGSGLAPFDCWICLRGVKTMALRVEKQQD---NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 150 ~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
. ..|++.........++.+....+|..++.+ .++.+.+.+++..++. ..+. .|.
T Consensus 245 ~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEkigg~~---qlG~-----------rPk- 309 (382)
T COG1103 245 RAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVAELEKIGGVK---QLGE-----------RPK- 309 (382)
T ss_pred cccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH---HhCC-----------CCc-
Confidence 2 134444445566667777777777666654 4445555555432221 1110 000
Q ss_pred CCceEEEEeCCHHH--------HHHHHhcCCccee-ecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe---
Q 021783 219 AGSVLSFLTGSLAL--------SKHVVETTKYFSI-TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV--- 286 (307)
Q Consensus 219 ~~~~~~~~~~~~~~--------~~~~~~~l~~~gi-~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~--- 286 (307)
...++.|..+.... .--++++|+..|| ++.+|.. .++.+|+
T Consensus 310 ~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~T---------------------------k~~K~svyGl 362 (382)
T COG1103 310 NHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPGQT---------------------------KYFKLSVYGL 362 (382)
T ss_pred ccceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccCce---------------------------eEEEEEeecC
Confidence 11233333222111 1124566777777 5555543 2377777
Q ss_pred ccCChHHHHHHHHHHHhcC
Q 021783 287 GIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 287 ~~~~~~~~i~~l~~~l~~~ 305 (307)
+.++++.+++.|+++++++
T Consensus 363 ~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 363 SWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 3489999999999998875
No 218
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.87 E-value=2.2e-20 Score=163.31 Aligned_cols=242 Identities=13% Similarity=0.113 Sum_probs=161.1
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC---CCceEEEEeCCCCCccccccHHHHHHHHHH
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHA 88 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~ 88 (307)
+++|.|+.....|.+......-..+..+++++.++++|+++|++.++ .+.++|+++.+.++.|.+.|+++|.++|++
T Consensus 198 ~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~ 277 (476)
T PLN02955 198 NEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKK 277 (476)
T ss_pred CCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHH
Confidence 56778888888998877443211111268999999999999998885 346788888999999999999999999999
Q ss_pred cCCEEEEeCccCCCCcCC---------ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhc--CCCCC
Q 021783 89 HGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE--GSGLA 157 (307)
Q Consensus 89 ~~~~li~D~a~~~~~~~~---------~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~--~~~~~ 157 (307)
||+++|+||+|+.|.+.. ....+.|++++|++|.+++ . +|+++++++ +.+.+....+.. +..++
T Consensus 278 ~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~-~---GGfi~gs~~-~~~~l~~~~~~~ifStalp 352 (476)
T PLN02955 278 YGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGC-H---GGFIACSKK-WKQLIQSRGRSFIFSTAIP 352 (476)
T ss_pred cCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhc-c---CceeecHHH-HHHHHHHhCCCCeeccccc
Confidence 999999999998665421 1112579999999999843 3 799998854 555555433322 22333
Q ss_pred hhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHH
Q 021783 158 PFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSK 234 (307)
Q Consensus 158 ~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (307)
+........+++.+ ..+.+++.++.+.+.+. . ++. ..++++.+.+.+...+.
T Consensus 353 p~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~----~--------G~~-------------~~sPI~pI~ig~~~~a~ 407 (476)
T PLN02955 353 VPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL----S--------GVD-------------ISSPIISLVVGNQEKAL 407 (476)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh----c--------CCC-------------CCCCEEEEEeCCHHHHH
Confidence 33444444444332 22333344444433331 0 111 12678899998888889
Q ss_pred HHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 235 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 235 ~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
.+.+.|.++|+.+.. ..+|.... +...+||+++..+.++.++.|.++|.
T Consensus 408 ~~~~~L~~~Gi~v~~------i~yPtVP~--------------g~~rLRi~lsA~Ht~edId~lv~~L~ 456 (476)
T PLN02955 408 KASRYLLKSGFHVMA------IRPPTVPP--------------NSCRLRVTLSAAHTTEDVKKLITALS 456 (476)
T ss_pred HHHHHHHHCCCEEEE------ECCCCCCC--------------CCceEEEeeCCCCCHHHHHHHHHHHH
Confidence 999999999998775 33342221 23469999987555555555555543
No 219
>PRK04311 selenocysteine synthase; Provisional
Probab=99.87 E-value=6.5e-21 Score=168.33 Aligned_cols=188 Identities=21% Similarity=0.234 Sum_probs=135.6
Q ss_pred cHHHHHHHhcCCCCeEEEcCCCCcch--HHHHhhhcccCCcEEEEecC---CChHHHHhhcCCCceEEEEeCCCCC--cc
Q 021783 2 AALAAVTHLLGTGEEIVAGDDLYGGT--DRLLSRVTPKTGVVVKRVNT---CDLDEVASAIGPWTKLVWVESPTNP--RQ 74 (307)
Q Consensus 2 aal~~~~~~~~~gd~Vlv~~~~~~~~--~~~~~~~~~~~g~~~~~v~~---~d~~~l~~~l~~~~~~v~~~~~~n~--tG 74 (307)
+|+.+++..+.+||+|++++.+|.++ ...+....+..|+++++++. .++++++++++++|++++++|++|+ +|
T Consensus 153 aAl~l~l~~l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~~~dle~aI~~~TklV~~vh~sN~~i~G 232 (464)
T PRK04311 153 AAVLLALNALAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTNRTHLRDYEQAINENTALLLKVHTSNYRIEG 232 (464)
T ss_pred HHHHHHHHHhCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCCCCCHHHHHHhcCccCeEEEEEcCCCccccc
Confidence 56655556678999999998866532 11123456788999999986 3788999999999999999999997 34
Q ss_pred --ccccHHHHHHHHHHcCCEEEEeCccCC---------CCcC---CccCCCccEEEeccccccccCCCceeEEEEEcChh
Q 021783 75 --QICDIRKIAEMAHAHGALLLVDNSIMS---------PVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER 140 (307)
Q Consensus 75 --~~~~~~~l~~~~~~~~~~li~D~a~~~---------~~~~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~ 140 (307)
...|+++|.++||+||+++++|++++. +..+ .+.++|+|++++|++|+++||. +|+++++++.
T Consensus 233 ~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~---~G~i~g~~~l 309 (464)
T PRK04311 233 FTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQ---AGIIVGKKEL 309 (464)
T ss_pred cCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCc---eEEEEEcHHH
Confidence 567999999999999999999995421 1112 3445799999999999998774 8999998665
Q ss_pred HHHHHHH-----HHHhcCCCCCh-----------hhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCC
Q 021783 141 LAKELYF-----LQNAEGSGLAP-----------FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP 193 (307)
Q Consensus 141 ~~~~~~~-----~~~~~~~~~~~-----------~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~ 193 (307)
+. .+.. ..+..+..++. ..++.....++.+..+++++.++++.+.++|+.+.
T Consensus 310 i~-~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~ 377 (464)
T PRK04311 310 IA-RLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAAL 377 (464)
T ss_pred HH-HHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhcc
Confidence 43 2321 11111222222 23333444455577788999999999999998764
No 220
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.86 E-value=5.9e-20 Score=163.08 Aligned_cols=259 Identities=21% Similarity=0.196 Sum_probs=163.6
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHh-hhcccCCcEEEEecCC------ChHHHHhhcC-CCceEEEEeCCCCCcccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLS-RVTPKTGVVVKRVNTC------DLDEVASAIG-PWTKLVWVESPTNPRQQI 76 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~------d~~~l~~~l~-~~~~~v~~~~~~n~tG~~ 76 (307)
.++.++++|||+|+++.++|+++...+. ......|++++.++.+ |++++++.++ .+++++++++++ +|..
T Consensus 102 ~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~--~~~~ 179 (416)
T PRK00011 102 AVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASA--YSRP 179 (416)
T ss_pred HHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCc--CCCc
Confidence 4556678999999999999976542211 1224456788877652 7899999986 478999887544 4667
Q ss_pred ccHHHHHHHHHHcCCEEEEeCccCCCCc-----CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh
Q 021783 77 CDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 151 (307)
Q Consensus 77 ~~~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~ 151 (307)
.|+++|.++|+++|+++|+|++|+.|.. +.... ++|++++|+||+++|+. +|+++++++.+.+.+......
T Consensus 180 ~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~~~S~~K~l~g~~---gg~i~~~~~~~~~~l~~~~~~ 255 (416)
T PRK00011 180 IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVVTTTTHKTLRGPR---GGLILTNDEELAKKINSAVFP 255 (416)
T ss_pred cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEEEecCCcCCCCCC---ceEEEeCCHHHHHHHHHHhCc
Confidence 7999999999999999999999976543 22223 68999999999986554 789898765565555444322
Q ss_pred cCC-CCCh-hhHHHHhhccc----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEE
Q 021783 152 EGS-GLAP-FDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 225 (307)
Q Consensus 152 ~~~-~~~~-~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 225 (307)
... .... ....+..+..+ .+..+.+++.++++.+.+.|++.. + .+. +. ...++++++
T Consensus 256 ~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~-~~--------------~~~~~~~~i 318 (416)
T PRK00011 256 GIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERG-F-RVV-SG--------------GTDNHLVLV 318 (416)
T ss_pred cccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-C-eee-ec--------------CCCCeEEEE
Confidence 111 1111 11111111111 235566777788888888887541 1 110 00 112467777
Q ss_pred EeCCHH-HHHHHHhcCCcceeecCCCCc-cceeecccccCCCCCcHHHHHhcCCCCCeEEEEe------c--cCChHHHH
Q 021783 226 LTGSLA-LSKHVVETTKYFSITVSFGSV-KSLISMPCFMSHASIPVEVRQARGLTEDLVRISV------G--IEDVNDLI 295 (307)
Q Consensus 226 ~~~~~~-~~~~~~~~l~~~gi~v~~g~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~------~--~~~~~~~i 295 (307)
.+++.. ....+.+.|...||.++.+.. +. ...| ..++.+|++. + .+|+++++
T Consensus 319 ~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~-~~~~-----------------~~~~~~Ri~~~~~~~~~~t~~di~~l~ 380 (416)
T PRK00011 319 DLRSKGLTGKEAEAALEEANITVNKNAVPFD-PRSP-----------------FVTSGIRIGTPAITTRGFKEAEMKEIA 380 (416)
T ss_pred eCcccCCCHHHHHHHHHHcCcEEccCcCCCC-CCCC-----------------CCCCceEecCHHHhhcCcCHHHHHHHH
Confidence 775321 356678888888998875432 10 0001 0134588854 1 36788888
Q ss_pred HHHHHHHhc
Q 021783 296 SDLDKALRT 304 (307)
Q Consensus 296 ~~l~~~l~~ 304 (307)
+.|++++..
T Consensus 381 ~~l~~~~~~ 389 (416)
T PRK00011 381 ELIADVLDN 389 (416)
T ss_pred HHHHHHHhc
Confidence 888877653
No 221
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.86 E-value=1.6e-20 Score=168.39 Aligned_cols=127 Identities=25% Similarity=0.370 Sum_probs=105.2
Q ss_pred hcCCCC----eEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCcccc-ccH
Q 021783 10 LLGTGE----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQI-CDI 79 (307)
Q Consensus 10 ~~~~gd----~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~-~~~ 79 (307)
+.++|| +|+++++.|+++. ..++..|++++.++.+ |++++++.+++++++|++++|+ +||.. .|+
T Consensus 153 ~~~~Gd~~~~~Vlv~~~~hp~~~----~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~dl 227 (481)
T PRK04366 153 HEARGDTKRTEVIVPDSAHGTNP----ASAAMAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPN-TLGLFERNI 227 (481)
T ss_pred hhccCcCCCCEEEEcCCccHhHH----HHHHHcCCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCC-CccccchHH
Confidence 356776 9999999998888 4467789999999873 7899999999899999999988 89987 489
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCc--CCccCCCccEEEeccccccccCCCc---eeEEEEEcChhH
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVL--SRPLELGADIVMHSATKFIAGHSDV---MAGVLAVKGERL 141 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~--~~~~~~~~d~~~~s~~K~~~g~~g~---~~G~~~~~~~~~ 141 (307)
++|+++|+++|+++++|+++..+.. .++.++|+|++++|+||++++|.|. -+|+++++++..
T Consensus 228 ~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~ 294 (481)
T PRK04366 228 LEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELA 294 (481)
T ss_pred HHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhH
Confidence 9999999999999999999975432 2677889999999999998755321 178999886543
No 222
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.85 E-value=1.3e-19 Score=158.71 Aligned_cols=251 Identities=17% Similarity=0.158 Sum_probs=159.0
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCC--cEEEEecC------CChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT------CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~------~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
||+|+.-+..++.....- ......| .+.+..+. .|.+++++.+.++++.+++++.+|. |...|+++|.++
T Consensus 166 gd~i~~l~l~~GGHlthg-~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~-~~~~dl~~i~ei 243 (493)
T PRK13580 166 NQRLLGMSLDSGGHLTHG-FRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAY-PRRVNFAKLREI 243 (493)
T ss_pred CCEEEeecCCCCCeeecC-cccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCcccc-CCCcCHHHHHHH
Confidence 899997777665443110 0001111 22222222 3889999999988889999988886 568899999999
Q ss_pred HHHcCCEEEEeCccCCCCcC-Ccc------CCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh-cCCCCC
Q 021783 86 AHAHGALLLVDNSIMSPVLS-RPL------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EGSGLA 157 (307)
Q Consensus 86 ~~~~~~~li~D~a~~~~~~~-~~~------~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~ 157 (307)
|+++|+++++|++|+.|.+. ... ..++|++++|+||++.||. +|+++++++ +.+.+....+. .+...+
T Consensus 244 a~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~---GG~I~~~~~-l~~~L~~a~P~i~gg~l~ 319 (493)
T PRK13580 244 ADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPR---GGLVLAKKE-YADAVDKGCPLVLGGPLP 319 (493)
T ss_pred HHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCC---eEEEEecHH-HHHHHhhCCCcccCCCcc
Confidence 99999999999999988765 221 1368999999999997776 699999865 33434322222 222333
Q ss_pred hhhHHHHhhcc----ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHH-
Q 021783 158 PFDCWICLRGV----KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLAL- 232 (307)
Q Consensus 158 ~~~~~~~~~~l----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 232 (307)
+..+..+.+.. ..+..+.+++.+|++.+.+.|..+. ++.+. + ...++++.+.+.+...
T Consensus 320 p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G------~~vv~---g--------gTdshIV~V~lg~~~~~ 382 (493)
T PRK13580 320 HVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRG------ARLVT---G--------GTDNHLVLIDVTSFGLT 382 (493)
T ss_pred HHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcC------CCccC---C--------CCCCCEEEEEeCCHHHH
Confidence 33222222211 1234467888899999999887652 11000 0 1135788888876553
Q ss_pred HHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--------CChHHHHHHHHHHHhc
Q 021783 233 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--------EDVNDLISDLDKALRT 304 (307)
Q Consensus 233 ~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--------~~~~~~i~~l~~~l~~ 304 (307)
...+.+.|.+.||.+.. ...|..... ....+.|||++.. +|++++.+.|.++++.
T Consensus 383 g~~a~~~L~e~GI~vn~------i~~Ptvp~g-----------~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 383 GRQAESALLDAGIVTNR------NSIPSDPNG-----------AWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred HHHHHHHHHHCCeEEcc------ccCCCCCCC-----------CCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 34666688888997765 223322211 0124569999854 6788888888777653
No 223
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.85 E-value=2.6e-20 Score=166.71 Aligned_cols=134 Identities=28% Similarity=0.360 Sum_probs=110.6
Q ss_pred HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 5 AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 5 ~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
++++++ .++||+|+++++.|+++...+...+...|++++.++.+ |++++++++++++++|++++| |+||.+.|+
T Consensus 144 ~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l 222 (447)
T PRK00451 144 AALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDL 222 (447)
T ss_pred HHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCH
Confidence 445555 47999999999999999887777777789999999885 889999999999999999998 889999999
Q ss_pred HHHHHHHHHcCCEEEE--eCccCCCCcCCccCCCccEEEeccccc-----cccCCCceeEEEEEcChhHHH
Q 021783 80 RKIAEMAHAHGALLLV--DNSIMSPVLSRPLELGADIVMHSATKF-----IAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~--D~a~~~~~~~~~~~~~~d~~~~s~~K~-----~~g~~g~~~G~~~~~~~~~~~ 143 (307)
++|.++|+++|+++++ |.. +.+....+.++++|++++|.+|+ ++|| | +|+++++++.+..
T Consensus 223 ~~I~~~a~~~~~~~iv~~d~~-~~g~~~~~~~~~~D~~~~s~~k~~~~~~~~Gp-g--~G~l~~~~~~~~~ 289 (447)
T PRK00451 223 EEIAEIAHAGGALFIVGVDPV-SLGLLKPPGEYGADIVVGEGQPLGIPLSFGGP-Y--LGFFATRKKLVRQ 289 (447)
T ss_pred HHHHHHHHHCCCEEEEEcChH-HhccCCCcccCCCCEEEECCCcCCCCCCCCCC-C--chHHHhhHHHHhh
Confidence 9999999999999998 543 45555556778999999988885 5444 4 8999988654443
No 224
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.85 E-value=6.7e-19 Score=155.78 Aligned_cols=265 Identities=17% Similarity=0.145 Sum_probs=174.3
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHH
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
++|||+|++++++|+++. ..+...|++++.++.+ |++++++.++++|++|++++ ++|...++++|.+
T Consensus 108 ~~pGd~VIv~~~t~~a~~----~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~~tkaVi~~~---~~G~p~dl~~I~~ 180 (438)
T PRK15407 108 LKPGDEVITVAAGFPTTV----NPIIQNGLVPVFVDVELPTYNIDASLLEAAVSPKTKAIMIAH---TLGNPFDLAAVKA 180 (438)
T ss_pred CCCCCEEEECCCCcHHHH----HHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCcCCeEEEEeC---CCCChhhHHHHHH
Confidence 589999999999999888 4455679999998863 78999999999999999876 4688889999999
Q ss_pred HHHHcCCEEEEeCccCCCCcCCc---cCCCccEEEeccc--cccccCCCceeEEEEEcChhHHHHHHHHHHhc-------
Q 021783 85 MAHAHGALLLVDNSIMSPVLSRP---LELGADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNAE------- 152 (307)
Q Consensus 85 ~~~~~~~~li~D~a~~~~~~~~~---~~~~~d~~~~s~~--K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~------- 152 (307)
+|+++|+++|+|++|+.|...+. ..+| |+.++||+ |.+.. .+ +|+++++++.+.+.........
T Consensus 181 la~~~gi~vIeDaa~a~G~~~~g~~~G~~g-d~~~fSf~~~k~~~~-ge--GG~l~t~d~~l~~~~~~~~~~G~~~~~~~ 256 (438)
T PRK15407 181 FCDKHNLWLIEDNCDALGSTYDGRMTGTFG-DIATLSFYPAHHITM-GE--GGAVFTNDPLLKKIIESFRDWGRDCWCAP 256 (438)
T ss_pred HHHHCCCEEEEECccchhhhcCCeeeeccC-ceEEEeCCCCCCccc-cC--ceEEEECCHHHHHHHHHHHHhCccccccc
Confidence 99999999999999998876533 3334 88899986 44532 22 7999999998877665543321
Q ss_pred ------------------------------C--CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEec
Q 021783 153 ------------------------------G--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNY 200 (307)
Q Consensus 153 ------------------------------~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 200 (307)
| ..++...+.+....|+.++...++..++++.+.+.|...+.. +..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~--~~~ 334 (438)
T PRK15407 257 GCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDF--LIL 334 (438)
T ss_pred ccccccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc--ccc
Confidence 1 134556677777778888777788888888888877654321 111
Q ss_pred CCCCCCCchHHHhhhccCCCc--eEEEEeCCH--HHHHHHHhcCCcceeecCCCCccceeecccccCC-----CCCcHHH
Q 021783 201 AGLPEHPGHELHYSQAKGAGS--VLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH-----ASIPVEV 271 (307)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~-----~~~~~~~ 271 (307)
+.. +++...+ .+.+.+++. ...+.+.+.|+++||.++......+..+|..... ..+|...
T Consensus 335 ~~~-----------~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae 403 (438)
T PRK15407 335 PEA-----------TPNSDPSWFGFPITVKEDAGFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTD 403 (438)
T ss_pred CcC-----------CCCCeeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHH
Confidence 111 0111122 333444421 2368899999999998765332122233322111 1222221
Q ss_pred HHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 021783 272 RQARGLTEDLVRISVGI----EDVNDLISDLDKALR 303 (307)
Q Consensus 272 ~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 303 (307)
.. .+..+-+.+.. ++++++++.++++++
T Consensus 404 ~~----~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 404 RI----MNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred HH----HhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 11 12335555432 567777777776654
No 225
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.85 E-value=2.3e-20 Score=166.61 Aligned_cols=258 Identities=16% Similarity=0.133 Sum_probs=153.7
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcc------cCCcEEEEecCC-----ChHHHHhhcC-CCceEEEEeCCCCC
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP------KTGVVVKRVNTC-----DLDEVASAIG-PWTKLVWVESPTNP 72 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~------~~g~~~~~v~~~-----d~~~l~~~l~-~~~~~v~~~~~~n~ 72 (307)
.++.+++++||+|++++.+|++....+....+ ..+.++..++.+ |++++++.+. .+++++++. ++.
T Consensus 115 ~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--~s~ 192 (452)
T PTZ00094 115 AVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--ASA 192 (452)
T ss_pred HHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--CCC
Confidence 55677889999999999999887644322111 112333444443 8999999995 367777764 345
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-C----ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-R----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 147 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~----~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~ 147 (307)
+|...|+++|.++|+++|+++++|++|+.|..+ + +. .++|++++|+|||+.||. +|+++++++........
T Consensus 193 ~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~-~~~D~l~~S~hK~l~GP~---Gg~l~~~~~~~~~l~~~ 268 (452)
T PTZ00094 193 YPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF-PYADVVTTTTHKSLRGPR---SGLIFYRKKVKPDIENK 268 (452)
T ss_pred CCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC-CCCcEEEcCCccCCCCCC---ceEEEEecccchHHHHh
Confidence 899999999999999999999999999988874 2 22 279999999999998887 47777765432211111
Q ss_pred HHH----hcCCCCChhhHHHHhhccccH-----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 148 LQN----AEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 148 ~~~----~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
... ...++...........+++.+ ....++..++++.+.+.|++. ++ .+..++ . ..
T Consensus 269 ~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~-~v~~~~-~------------~~ 333 (452)
T PTZ00094 269 INEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GY-DLVTGG-T------------DN 333 (452)
T ss_pred hccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-Cc-EEecCC-C------------CC
Confidence 110 001122222222222233322 233455566777777777553 22 111111 0 01
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCcceeecC-CCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--------C
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYFSITVS-FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--------E 289 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~-~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--------~ 289 (307)
...++.|...+.. ...+...|...||.++ .|..+. + ....++.+|+|++. +
T Consensus 334 ~~~~v~~~~~~~~-~~~~~~~L~~~gI~vs~~~~p~~----~---------------~~~~~~~vRis~~~~tt~g~~~~ 393 (452)
T PTZ00094 334 HLVLVDLRPFGIT-GSKMEKLLDAVNISVNKNTIPGD----K---------------SALNPSGVRLGTPALTTRGAKEK 393 (452)
T ss_pred ceEeecCCcCCCC-HHHHHHHHHHCCcEEecccCCCC----C---------------cCCCCCeEEECCHHHHhCCCCHH
Confidence 1223334334333 5677777777799885 332211 0 11124679999953 5
Q ss_pred ChHHHHHHHHHHHh
Q 021783 290 DVNDLISDLDKALR 303 (307)
Q Consensus 290 ~~~~~i~~l~~~l~ 303 (307)
|++++++.|.+.++
T Consensus 394 di~~l~~~l~~~~~ 407 (452)
T PTZ00094 394 DFKFVADFLDRAVK 407 (452)
T ss_pred HHHHHHHHHHHHHH
Confidence 66677777766664
No 226
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.85 E-value=1e-18 Score=144.99 Aligned_cols=259 Identities=15% Similarity=0.183 Sum_probs=168.1
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcC------CCceEEEEeCCCCC
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG------PWTKLVWVESPTNP 72 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~------~~~~~v~~~~~~n~ 72 (307)
+...+..|||.-+++.|-|++... .+.=+.|++++.+.+. +.+.+|+++. .+.+.+++++|+||
T Consensus 162 l~fcLadpgdafLvPtPyY~gfdr---dl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNP 238 (471)
T KOG0256|consen 162 LMFCLADPGDAFLVPTPYYPGFDR---DLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNP 238 (471)
T ss_pred HHHHhcCCCceeeecCCCCCcccc---cceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCC
Confidence 444577899999999999998864 3345678999888763 6788887775 57899999999999
Q ss_pred cccccc---HHHHHHHHHHcCCEEEEeCccCCCCcCC------------cc-CCCccEEEeccccccccCCCceeEEEEE
Q 021783 73 RQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR------------PL-ELGADIVMHSATKFIAGHSDVMAGVLAV 136 (307)
Q Consensus 73 tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~------------~~-~~~~d~~~~s~~K~~~g~~g~~~G~~~~ 136 (307)
-|.+.+ +..+..+|.++|+.+|+|++|+...+.. +. ..+..-++.|+||-+ |.+|.|.|.++.
T Consensus 239 LG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~-GlpGfRvGviYS 317 (471)
T KOG0256|consen 239 LGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDF-GLPGFRVGVIYS 317 (471)
T ss_pred CCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEecccc-CCCceEEEEEEe
Confidence 999996 7788888999999999999998443321 11 224568899999999 789999999999
Q ss_pred cChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhc
Q 021783 137 KGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 216 (307)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 216 (307)
.++.+......+..... .++..+.++...|..-+-....+.++.++++.+-+... .++..-++..+
T Consensus 318 ~ne~VvsaA~kmssf~~--vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~--~gLk~lgI~cl---------- 383 (471)
T KOG0256|consen 318 NNEDVVSAATKMSSFGL--VSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIV--EGLKALGIPCL---------- 383 (471)
T ss_pred cChHHHHHHHHHhhccC--CcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHH--hhHHhcCCcee----------
Confidence 99988877777666543 34455555554443211112223344444443332110 00001111111
Q ss_pred cCCCceEEE-Ee------CCHHHHHHHHhc-CCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 217 KGAGSVLSF-LT------GSLALSKHVVET-TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 217 ~~~~~~~~~-~~------~~~~~~~~~~~~-l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
+...++++| .+ .+.+....+.+. +...++.+++|.++. | ..+||+|+.|..
T Consensus 384 ~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~-C--------------------~EpGWFRvcFAn 442 (471)
T KOG0256|consen 384 KSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCH-C--------------------HEPGWFRVCFAN 442 (471)
T ss_pred ecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcce-e--------------------cCCCeEEEEecc
Confidence 223455554 33 223323334444 444488899998743 1 137999999975
Q ss_pred --CChHH-HHHHHHHHHh
Q 021783 289 --EDVND-LISDLDKALR 303 (307)
Q Consensus 289 --~~~~~-~i~~l~~~l~ 303 (307)
+++.. .+++++..+.
T Consensus 443 ~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 443 MSEETLEVAMRRLKQFLD 460 (471)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 34433 6777777664
No 227
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.84 E-value=5.3e-19 Score=156.05 Aligned_cols=259 Identities=19% Similarity=0.166 Sum_probs=157.6
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhccc--CCcEE--EEecC------CChHHHHhhcC-CCceEEEEeCC
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVV--KRVNT------CDLDEVASAIG-PWTKLVWVESP 69 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~--~g~~~--~~v~~------~d~~~l~~~l~-~~~~~v~~~~~ 69 (307)
+|+ +++.++++|||+|++++..|.+... ..++. .+... ..++. .|++++++.+. .++++|+++++
T Consensus 101 ~A~~~~l~al~~~GD~Vl~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~ 177 (416)
T PRK13034 101 QANGAVYLALLKPGDTILGMSLSHGGHLT---HGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFS 177 (416)
T ss_pred HHHHHHHHHhcCCCCEEEEcCccceeeee---cCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCC
Confidence 344 6777889999999999999976321 11111 12211 23333 58899998885 46888887654
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCccCCCCcCCcc---C-CCccEEEeccccccccCCCceeEEEEEcChhHHHHH
Q 021783 70 TNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL---E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 145 (307)
Q Consensus 70 ~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~---~-~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~ 145 (307)
. +|...|+++|.++|++||+++++|++|+.|...... . .++|++++|+||+++|+. +|+++++++.+.+..
T Consensus 178 ~--~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~---GG~v~~~~~~~~~~~ 252 (416)
T PRK13034 178 A--YPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPR---GGMILTNDEEIAKKI 252 (416)
T ss_pred c--cccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCC---CeEEEECcHHHHHHH
Confidence 3 578889999999999999999999999877653211 1 258999999999997765 688888777665544
Q ss_pred HHHHHhcC---CCCChhhHHHHhhccccH----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 146 YFLQNAEG---SGLAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 146 ~~~~~~~~---~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
... ...+ ...++..+....+.++.+ ..+.+++.++++++.+.|+.. ++ .+..+ ..
T Consensus 253 ~~~-~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~-~~~~~---------------~~ 314 (416)
T PRK13034 253 NSA-VFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GY-DLVSG---------------GT 314 (416)
T ss_pred Hhh-cCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CC-EeccC---------------CC
Confidence 332 1211 112222222222222221 223567777888888877654 21 11000 01
Q ss_pred CCceEEEEeCCHH-HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--------C
Q 021783 219 AGSVLSFLTGSLA-LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--------E 289 (307)
Q Consensus 219 ~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--------~ 289 (307)
.++++.+.+.+.. ....+.+.|...||.++.-....-...|. .+..+|+|++. +
T Consensus 315 ~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~-----------------~~~~lR~~~~~~t~~~~~~~ 377 (416)
T PRK13034 315 DNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPF-----------------VTSGIRIGTPAGTTRGFGEA 377 (416)
T ss_pred CCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCC-----------------CCCeeEeCcHHHHhCCCCHH
Confidence 2556666665432 35566677888888776411100011110 14459999864 6
Q ss_pred ChHHHHHHHHHHHh
Q 021783 290 DVNDLISDLDKALR 303 (307)
Q Consensus 290 ~~~~~i~~l~~~l~ 303 (307)
|++++++.|.+.+.
T Consensus 378 di~~l~~~l~~~~~ 391 (416)
T PRK13034 378 EFREIANWILDVLD 391 (416)
T ss_pred HHHHHHHHHHHHHh
Confidence 77777777776664
No 228
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.84 E-value=2.6e-19 Score=157.28 Aligned_cols=249 Identities=16% Similarity=0.056 Sum_probs=167.0
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHH
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA 88 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~ 88 (307)
..|++++.+|++.. ..++..|++++.+|.+ |+++|+++++++|.+|++++.+|.||.+.|+++|.++|++
T Consensus 139 ~~ii~s~~~H~sv~----ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~ 214 (431)
T TIGR01788 139 PNLVMGSNVQVCWE----KFARYFDVELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDE 214 (431)
T ss_pred cEEEEcCcchHHHH----HHHHHcCceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHH
Confidence 37999999998887 5666778888888763 7899999999999999999999999999999999999999
Q ss_pred c------CCEEEEeCccCC-------CCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhH-HHHHHHHHHhc-
Q 021783 89 H------GALLLVDNSIMS-------PVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELYFLQNAE- 152 (307)
Q Consensus 89 ~------~~~li~D~a~~~-------~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~-~~~~~~~~~~~- 152 (307)
+ |+++++|++|+. +..+ +....++|.++.|.|||+.+|.| +|+++++++.. ...+.....+.
T Consensus 215 ~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~l~~~~~~~~~yl~ 292 (431)
T TIGR01788 215 YNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPG--VGWVIWRDEEALPEELIFHVNYLG 292 (431)
T ss_pred HHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCC--cEEEEEeChHHcchhheecccccC
Confidence 9 999999999983 3333 33345789999999999878999 99999987632 12111000011
Q ss_pred ---------CCCC--ChhhHHHHhhc--cccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 153 ---------GSGL--APFDCWICLRG--VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 153 ---------~~~~--~~~~~~~~~~~--l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
++.. .....|+.+.. ...+....++..+.++.+.+.|++.+.+. +..+. ..
T Consensus 293 ~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~e--------------l~~~~--~~ 356 (431)
T TIGR01788 293 GDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFE--------------IISDG--SG 356 (431)
T ss_pred CCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--------------EeeCC--CC
Confidence 1111 11223443332 23445556666677777777777665331 11110 14
Q ss_pred CceEEEEeCC----HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec----cCCh
Q 021783 220 GSVLSFLTGS----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDV 291 (307)
Q Consensus 220 ~~~~~~~~~~----~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~ 291 (307)
.++++|.+.+ ..+..++.+.|...|+.+..-. .|... .+.-++|+++- .+.+
T Consensus 357 ~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~------~p~~~--------------~~~~~lR~~~~~~~~~~~~ 416 (431)
T TIGR01788 357 IPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYT------LPKNA--------------EDIVVMRIVVREGFSRDLA 416 (431)
T ss_pred ceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCC------CCCcc--------------CCeEEEEEEecCCCCHHHH
Confidence 6889999864 1235677778877777543211 11100 01234899884 3677
Q ss_pred HHHHHHHHHHHhcC
Q 021783 292 NDLISDLDKALRTG 305 (307)
Q Consensus 292 ~~~i~~l~~~l~~~ 305 (307)
+++++.|.+++..+
T Consensus 417 ~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 417 ELLIEDIEAALAYL 430 (431)
T ss_pred HHHHHHHHHHHHhh
Confidence 78888887777654
No 229
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.84 E-value=5.7e-20 Score=160.58 Aligned_cols=126 Identities=15% Similarity=0.140 Sum_probs=96.4
Q ss_pred HH-HHHHHhcCC-CCeEEEcCCCCcchHHHHhh-hcccCCc-EEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 3 AL-AAVTHLLGT-GEEIVAGDDLYGGTDRLLSR-VTPKTGV-VVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 3 al-~~~~~~~~~-gd~Vlv~~~~~~~~~~~~~~-~~~~~g~-~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
++ +++..++++ ++.|++ ...|++.+ .. +++..|+ +++.++.+ |+++ ++. ++.|.++|.+|.|
T Consensus 79 ~~~~~~~~l~~~~~~~vi~-~g~f~~~~---~~~~~~~~g~~~v~~~~~~~g~~~d~~~----i~~-~~~V~~~h~~t~t 149 (378)
T PRK03080 79 AWEMALWSLLGARRVDHLA-WESFGSKW---ATDVVKQLKLEDPRVLEADYGSLPDLSA----VDF-DRDVVFTWNGTTT 149 (378)
T ss_pred HHHHHHHhcCCCCcceEEE-eCHHHHHH---HHHHHhhcCCCCceEeccCCCCCCCHhh----cCC-CCCEEEEecCCcc
Confidence 45 344556775 455555 56776543 23 3466788 88877753 4444 332 5678999999999
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
|...|+++|.+ +++|+++++|++|+.|..+ +..+ +|++++|.|||+++|+| .|+++++++.+..
T Consensus 150 G~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~--iD~~~~s~~K~l~~P~G--~g~l~v~~~~~~~ 214 (378)
T PRK03080 150 GVRVPVARWIG--ADREGLTICDATSAAFALPLDWSK--LDVYTFSWQKVLGGEGG--HGMAILSPRAVER 214 (378)
T ss_pred ceeccchhhcc--ccCCCeEEEecccccccCCCCHHH--CcEEEEehhhhCCCCCc--eEEEEECHHHHHh
Confidence 99999999999 8899999999999999988 6654 79999999999999999 9999999776543
No 230
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.83 E-value=1.4e-18 Score=154.31 Aligned_cols=265 Identities=17% Similarity=0.115 Sum_probs=160.1
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC---------------CChHHHHhhcC----CCce
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---------------CDLDEVASAIG----PWTK 62 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------------~d~~~l~~~l~----~~~~ 62 (307)
|+ .++.++++||| |++++|.|.++. ..+...|++++.++. .|+++|++.++ ++|+
T Consensus 105 A~~~~~~all~pGD-Vii~~p~~~~~~----~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk 179 (460)
T PRK13238 105 AEQILFPVLIKKGD-VVPSNYHFDTTR----AHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVP 179 (460)
T ss_pred HHHHHHHHhCCCCC-EEccCCcccchH----HHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCcee
Confidence 45 45567899999 999999887776 445678999998875 36899999997 3799
Q ss_pred EEEEeCCCCCcc-cccc---HHHHHHHHHHcCCEEEEeCccCCC-----------CcC-Ccc------CCCccEEEeccc
Q 021783 63 LVWVESPTNPRQ-QICD---IRKIAEMAHAHGALLLVDNSIMSP-----------VLS-RPL------ELGADIVMHSAT 120 (307)
Q Consensus 63 ~v~~~~~~n~tG-~~~~---~~~l~~~~~~~~~~li~D~a~~~~-----------~~~-~~~------~~~~d~~~~s~~ 120 (307)
+|++++|+||+| .+++ +++|.++|++||+++|+|+++... ... ... ....|.++.|++
T Consensus 180 ~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~ 259 (460)
T PRK13238 180 FIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAK 259 (460)
T ss_pred EEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecc
Confidence 999999999998 6765 679999999999999999987431 111 111 124799999999
Q ss_pred cccccCCCceeEEEEEcChhHHHHHHHHH----HhcC-CCCChhhHHHHhhccccH--HHHHHHHHHHHHHHHHHHhcCC
Q 021783 121 KFIAGHSDVMAGVLAVKGERLAKELYFLQ----NAEG-SGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHP 193 (307)
Q Consensus 121 K~~~g~~g~~~G~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~~ 193 (307)
|...++. +|+++++++.+.+.+.... .... +..+...+.....+++.. ....+...++.+.+.+.|+..
T Consensus 260 K~g~~~~---GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~- 335 (460)
T PRK13238 260 KDAMVNI---GGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA- 335 (460)
T ss_pred cCCCCcc---eeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC-
Confidence 9875654 6899988766666554442 1111 122222233333333221 222333444566777777653
Q ss_pred CccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH-------H-HHHHH-HhcCCcceeecCCCCccceeecccccCC
Q 021783 194 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-------A-LSKHV-VETTKYFSITVSFGSVKSLISMPCFMSH 264 (307)
Q Consensus 194 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~-~~~l~~~gi~v~~g~~~~~~~~p~~~~~ 264 (307)
++. +.. ...+..+...+... . ....+ ...+.+.||.+..++.|..-..| ...
T Consensus 336 G~~-~~~----------------p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~--~~~ 396 (460)
T PRK13238 336 GVP-IQT----------------PAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDP--KTG 396 (460)
T ss_pred CCC-eEc----------------cCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCC--CCc
Confidence 110 000 11233444443221 0 12323 33345667777666654321111 000
Q ss_pred CCCcHHHHHhcCCCCCeEEEEecc-----CChHHHHHHHHHHHh
Q 021783 265 ASIPVEVRQARGLTEDLVRISVGI-----EDVNDLISDLDKALR 303 (307)
Q Consensus 265 ~~~~~~~~~~~~~~~~~iRis~~~-----~~~~~~i~~l~~~l~ 303 (307)
.......+.+|+.+.+ ++++++.+.|++..+
T Consensus 397 --------~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 397 --------EQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred --------cccCCccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 0001135789999965 778888888877653
No 231
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.83 E-value=8.5e-20 Score=154.29 Aligned_cols=128 Identities=24% Similarity=0.314 Sum_probs=105.3
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-----------CChHHHHhhcC--CCceEEEEeCCCC
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----------CDLDEVASAIG--PWTKLVWVESPTN 71 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----------~d~~~l~~~l~--~~~~~v~~~~~~n 71 (307)
+++.++++|||+|+++.++|.+.. ..+...|+++++++. .|++++++.++ ++++++++++| |
T Consensus 90 ~~l~al~~~gd~Vlv~~~~h~s~~----~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~ 164 (294)
T cd00615 90 AVILAVCGPGDKILIDRNCHKSVI----NGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-T 164 (294)
T ss_pred HHHHHcCCCCCEEEEeCCchHHHH----HHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-C
Confidence 566778999999999999999888 445567899888864 27899999985 57899999988 6
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccCCC-----CcC-CccCCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIMSP-----VLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~-----~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
++|.+.|+++|.++|+++|+++++|++|+.. ..+ .....++|++++|+||+++|+++ +|++..+++
T Consensus 165 ~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~div~~S~hK~l~g~~~--~~~l~~~~~ 236 (294)
T cd00615 165 YYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIVVQSTHKTLPALTQ--GSMIHVKGD 236 (294)
T ss_pred CCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCCcEEEEchhcccchHhH--HHHHHhCCC
Confidence 8999999999999999999999999999742 223 34456899999999999976654 677777654
No 232
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.82 E-value=7.5e-19 Score=155.14 Aligned_cols=244 Identities=19% Similarity=0.195 Sum_probs=154.3
Q ss_pred CC-CeEEEcCCCCcchHHHHhh---------hcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc----
Q 021783 13 TG-EEIVAGDDLYGGTDRLLSR---------VTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD---- 78 (307)
Q Consensus 13 ~g-d~Vlv~~~~~~~~~~~~~~---------~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---- 78 (307)
+| ++|+..+++|.+....... .....+.++..+|..|++++++.+.+++++|++++++||+|.+.+
T Consensus 126 ~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aviiep~~~~~G~~~~~~~~ 205 (398)
T PRK03244 126 TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDDTAAVFLEPIQGEAGVVPPPAGY 205 (398)
T ss_pred HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCCeEEEEEecccCCCCCcCCCHHH
Confidence 44 5677777777666422111 111223456677778999999998888999999999999999987
Q ss_pred HHHHHHHHHHcCCEEEEeCccCC-CCc---C--CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhc
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMS-PVL---S--RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 152 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~-~~~---~--~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~ 152 (307)
+++|.++|++||+++|+||+|+. |.. . .......|+ .+++|+++ +|++.|+++.+++ +.+.+.......
T Consensus 206 l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi--~t~sK~l~--~G~~ig~~~~~~~-~~~~~~~~~~~~ 280 (398)
T PRK03244 206 LAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDV--VTLAKGLG--GGLPIGACLAFGP-AADLLTPGLHGS 280 (398)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCE--EEEchhhh--CCcccEEEEEcHH-HHhhccCCCCcC
Confidence 89999999999999999999962 111 1 111223454 47899995 4788999999865 444443221222
Q ss_pred CCCCChhhHHHHhhccccHH--HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH
Q 021783 153 GSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 230 (307)
Q Consensus 153 ~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (307)
....++..+..+...++.+. ...+...+..+.+.+.|++.. ++... ..++.+.++++.++..
T Consensus 281 t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~------~~~~~----------~v~g~g~~~~i~~~~~ 344 (398)
T PRK03244 281 TFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEALG------HPLVD----------HVRGRGLLLGIVLTAP 344 (398)
T ss_pred CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcC------CCcee----------eEeeccEEEEEEEecc
Confidence 23344555555555554332 122333333444444444321 11000 1134578888888543
Q ss_pred HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 231 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 231 ~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
....+.+.+..+|+.++... .+.+|++++. +++++.++.|.++++++
T Consensus 345 -~~~~~~~~l~~~Gv~~~~~~---------------------------~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~ 395 (398)
T PRK03244 345 -VAKAVEAAAREAGFLVNAVA---------------------------PDVIRLAPPLIITDAQVDAFVAALPAILDAA 395 (398)
T ss_pred -HHHHHHHHHHHCCeEEeecC---------------------------CCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 46778888888898775411 2459999765 78888888888887654
No 233
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.81 E-value=3.6e-19 Score=154.04 Aligned_cols=249 Identities=14% Similarity=0.086 Sum_probs=158.7
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHh-hcCCCceEEEEeCCCCCc
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVAS-AIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~-~l~~~~~~v~~~~~~n~t 73 (307)
+|+ +++.+++.+||++++.....++.. |...++.+|.. +.+... +..++++ .+++++++|.++|..|+|
T Consensus 78 ~~~Ea~~~nl~~~g~~~l~i~~G~fg~r--~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTst 154 (360)
T PRK05355 78 LQFAMVPMNLLGGGKKADYVDTGSWSKK--AIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETID 154 (360)
T ss_pred HHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcc
Confidence 456 667789999999987666554554 34778888866 443321 2334444 777789999999999999
Q ss_pred cccc-cHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH---H-
Q 021783 74 QQIC-DIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY---F- 147 (307)
Q Consensus 74 G~~~-~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~---~- 147 (307)
|... |+++| +|+++++|++++.|..+ ++.++ |++++|.+|++ ||+| .|+++++++.+.+... .
T Consensus 155 Gv~~~~i~~i------~g~l~vVDavss~g~~~idv~~~--d~~~~ssqK~l-gP~G--lg~l~~s~~~l~~~~~~~~~~ 223 (360)
T PRK05355 155 GTEFHELPDT------GDVPLVADMSSDILSRPIDVSKF--GLIYAGAQKNI-GPAG--LTIVIVREDLLGRALPSIPSM 223 (360)
T ss_pred eEecCccccc------CCCcEEEEcCccccCccCCHHHc--cEEEEeccccc-cCCc--eEEEEECHHHHhhcccCCChH
Confidence 9998 77766 89999999999999987 77765 59999999999 6999 9999999876644211 0
Q ss_pred ------HHH-hcCCCCChhhHHHHhhccc------cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhh
Q 021783 148 ------LQN-AEGSGLAPFDCWICLRGVK------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 148 ------~~~-~~~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 214 (307)
... ....+++....+....+++ .++.+.++..+.++.+.+.++..+.. ..+.. +
T Consensus 224 ~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~-----~~~~~-~------- 290 (360)
T PRK05355 224 LDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFY-----RNPVA-P------- 290 (360)
T ss_pred HHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCc-----ccCCC-h-------
Confidence 011 1112333333333333332 34555666666777777777765410 00000 0
Q ss_pred hccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHH
Q 021783 215 QAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDL 294 (307)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~ 294 (307)
. ...+.+++|.+++.....++++.+...|+....|.. ..+.+|+|+...+..+.
T Consensus 291 ~-~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~-------------------------~~g~vRiS~~~~nt~ee 344 (360)
T PRK05355 291 E-DRSRMNVPFTLADEELDKKFLAEAKAAGLVGLKGHR-------------------------SVGGMRASIYNAMPLEG 344 (360)
T ss_pred h-hcCCcEEEEEcCChHHHHHHHHHHHHCCCcccCCCC-------------------------ccCcEEEECCCCCCHHH
Confidence 0 112367889887654345666666666775433221 13569999987555555
Q ss_pred HHHHHHHHh
Q 021783 295 ISDLDKALR 303 (307)
Q Consensus 295 i~~l~~~l~ 303 (307)
++.|.++|+
T Consensus 345 i~~l~~~l~ 353 (360)
T PRK05355 345 VQALVDFMK 353 (360)
T ss_pred HHHHHHHHH
Confidence 555555554
No 234
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.81 E-value=3.6e-19 Score=153.30 Aligned_cols=250 Identities=15% Similarity=0.084 Sum_probs=161.3
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC---------CChHHHHhhcCCCceEEEEeCCCC
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---------CDLDEVASAIGPWTKLVWVESPTN 71 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~d~~~l~~~l~~~~~~v~~~~~~n 71 (307)
.|+ +++..++++||++++...+.++.. |...++..|+ ++.+.. .++++++ +++++++|.++|..|
T Consensus 67 ~a~ea~~~nl~~~~~~~l~i~~G~fg~r--~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ET 141 (349)
T TIGR01364 67 GQFAAVPLNLLAEGKVADYIVTGAWSKK--AAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANET 141 (349)
T ss_pred HHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCC
Confidence 356 566778889999987776655555 4588888998 555552 2444444 356899999999999
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH---
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF--- 147 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~--- 147 (307)
.||...+ ++++.+++++++|++++.|..+ ++.++ |++++|.+|++ ||+| .|+++++++.+.+....
T Consensus 142 stGv~~~-----~l~~~~~~l~iVDavss~g~~~id~~~~--d~~~~ssqK~l-gP~G--lg~l~~s~~~~~~~~~~~~~ 211 (349)
T TIGR01364 142 IHGVEFR-----ELPDVKNAPLVADMSSNILSRPIDVSKF--GLIYAGAQKNI-GPAG--LTVVIVRKDLLGRASRITPS 211 (349)
T ss_pred cccEecc-----eecccCCCeEEEEccccccCccCCHHHc--cEEEEeccccc-CCCc--eEEEEECHHHHhhcccCCCC
Confidence 9999876 6777789999999999999987 77765 49999999999 6999 99999998766432110
Q ss_pred ---HH--H--hc-CCCCChhhHHHHhhccc------cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 148 ---LQ--N--AE-GSGLAPFDCWICLRGVK------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 148 ---~~--~--~~-~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
.. . .. ..+++....+....+++ .++.+.++..+.++.+.+.+++.+++ ...... +.
T Consensus 212 ~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl---~~~~~~--~~----- 281 (349)
T TIGR01364 212 MLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGF---YRNPVD--PR----- 281 (349)
T ss_pred cchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCe---eccCCC--HH-----
Confidence 01 0 11 11223233333333332 24555666666777777777766431 111000 00
Q ss_pred hhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHH
Q 021783 214 SQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVND 293 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~ 293 (307)
.....+++|.+++.....+++..+...|+++..|.. ..+.+|+|+...+.++
T Consensus 282 ---~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~-------------------------~~g~vRvS~~~~nt~e 333 (349)
T TIGR01364 282 ---NRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHR-------------------------SVGGMRASIYNAMPLE 333 (349)
T ss_pred ---HcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCcc-------------------------ccCeeEEECcCCCCHH
Confidence 112356888887543236666777778885555442 1346999998766666
Q ss_pred HHHHHHHHHhc
Q 021783 294 LISDLDKALRT 304 (307)
Q Consensus 294 ~i~~l~~~l~~ 304 (307)
.++.|.++|++
T Consensus 334 did~l~~al~~ 344 (349)
T TIGR01364 334 GVQALVDFMKE 344 (349)
T ss_pred HHHHHHHHHHH
Confidence 66666555543
No 235
>PRK10534 L-threonine aldolase; Provisional
Probab=99.81 E-value=2.2e-18 Score=148.68 Aligned_cols=242 Identities=17% Similarity=0.180 Sum_probs=147.3
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccC-CcEEEEecCC-----ChHHHHhhcCC------CceEEEEeCCCCC
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT-GVVVKRVNTC-----DLDEVASAIGP------WTKLVWVESPTNP 72 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~-----d~~~l~~~l~~------~~~~v~~~~~~n~ 72 (307)
.++.+++++||+|+++.|.|...+.. ..+... +++++.++.+ |++++++++++ ++++|++++|+
T Consensus 64 ~~l~~~~~~gd~vi~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~-- 139 (333)
T PRK10534 64 VALLSHCERGEEYIVGQAAHNYLYEA--GGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH-- 139 (333)
T ss_pred HHHHHhcCCCCeeEEechhhhhHhcC--CchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--
Confidence 44556789999999988877433211 001233 3677777543 78999998875 68999999765
Q ss_pred ccccccH---HHHHHHHHHcCCEEEEeCccCCCCc---C-Cc--cCCCccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 73 RQQICDI---RKIAEMAHAHGALLLVDNSIMSPVL---S-RP--LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 73 tG~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~---~-~~--~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
+|.+.+. ++|.++|++|++++++|++|..... . .. .....|.++.||||.++. + .+|+++++ +.+.+
T Consensus 140 ~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~-~--~G~~~~~~-~~~i~ 215 (333)
T PRK10534 140 NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGT-P--VGSLLVGN-RDYIK 215 (333)
T ss_pred CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCC-c--ccceEEcC-HHHHH
Confidence 5999875 4566789999999999999763211 1 11 011246566789998853 3 24467665 44555
Q ss_pred HHHHHHHhcCCCCC--hhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 144 ELYFLQNAEGSGLA--PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 144 ~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
.+.......+...+ ...+......++.....+++..++++.+.+.|++.. + + +. +..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~~~L~~~g-~--------~------~~----~~~~n 276 (333)
T PRK10534 216 RARRWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLAEQLREAG-A--------D------VM----RQDTN 276 (333)
T ss_pred HHHHHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCC-C--------c------cC----CCCce
Confidence 55554443332222 233444444444333444444455566777776531 1 0 01 11366
Q ss_pred eEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec----cCChHHHHHH
Q 021783 222 VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISD 297 (307)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~ 297 (307)
++++++++. ....+.+.|.++||.++.|.. +|++.. .++++++++.
T Consensus 277 fv~~~~~~~-~~~~~~~~l~~~gi~v~~~~~-----------------------------~rl~~~~r~t~e~~~~~~~~ 326 (333)
T PRK10534 277 MLFVRVGEE-QAAALGEYMRERNVLINASPI-----------------------------VRLVTHLDVSREQLAEVVAH 326 (333)
T ss_pred EEEEECCch-hHHHHHHHHHHcCeeecCCce-----------------------------EEEEEEeCCCHHHHHHHHHH
Confidence 777877642 366778888899999877542 555443 3677777777
Q ss_pred HHHHHh
Q 021783 298 LDKALR 303 (307)
Q Consensus 298 l~~~l~ 303 (307)
|.+.+.
T Consensus 327 l~~~~~ 332 (333)
T PRK10534 327 WRAFLA 332 (333)
T ss_pred HHHHhc
Confidence 776653
No 236
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.81 E-value=2.4e-18 Score=162.54 Aligned_cols=131 Identities=18% Similarity=0.192 Sum_probs=110.4
Q ss_pred HHHHHhcCC-CC----eEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC---CCceEEEEeCCCC
Q 021783 5 AAVTHLLGT-GE----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG---PWTKLVWVESPTN 71 (307)
Q Consensus 5 ~~~~~~~~~-gd----~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~---~~~~~v~~~~~~n 71 (307)
.++.++.++ || +|+++..+|.++..+|. ..|++++.++.+ |+++|++.++ +++++|++++|+|
T Consensus 602 ~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~----~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn 677 (993)
T PLN02414 602 MVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA----MCGMKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPST 677 (993)
T ss_pred HHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH----HCCCEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCc
Confidence 455666665 88 89999999999995543 479999999974 8999999998 4789999999999
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccCCCCc--CCccCCCccEEEeccccccccCCC---ceeEEEEEcCh
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL--SRPLELGADIVMHSATKFIAGHSD---VMAGVLAVKGE 139 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~--~~~~~~~~d~~~~s~~K~~~g~~g---~~~G~~~~~~~ 139 (307)
.+|...|+++|.++||++|+++++|+++..+.. ..+.++|+|++++|.||+|++|.| --.|++.+++.
T Consensus 678 ~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~ 750 (993)
T PLN02414 678 HGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH 750 (993)
T ss_pred cccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchh
Confidence 999999999999999999999999999987663 377889999999999998864432 11789988864
No 237
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.80 E-value=3.5e-18 Score=136.99 Aligned_cols=263 Identities=17% Similarity=0.139 Sum_probs=175.6
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC-CCceEEEEeCCCCCcc
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG-PWTKLVWVESPTNPRQ 74 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~-~~~~~v~~~~~~n~tG 74 (307)
+++ +++.+++.|||+|++-...-.+.. +...+++.|+++..++.+ .++.+.+.+. .++++++++|..+.||
T Consensus 79 ~g~E~al~N~lePgd~vLv~~~G~wg~r--a~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTg 156 (385)
T KOG2862|consen 79 SGWEAALVNLLEPGDNVLVVSTGTWGQR--AADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTG 156 (385)
T ss_pred chHHHHHHhhcCCCCeEEEEEechHHHH--HHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCcccc
Confidence 455 566678999999997665443554 337789999999998764 7899998886 7899999999999999
Q ss_pred cccc-HHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH------
Q 021783 75 QICD-IRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY------ 146 (307)
Q Consensus 75 ~~~~-~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~------ 146 (307)
+..| ++.+-++||+|++++++|.+.+.|..+ .+++||+|+.....+|.+++|+| .+.+..++......-.
T Consensus 157 V~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~G--LsiisfS~ka~~~~~~rK~~~~ 234 (385)
T KOG2862|consen 157 VLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAG--LSIISFSDKALEAIRDRKTKPV 234 (385)
T ss_pred ccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCCCCC--cceeecCHHHHHHHhhccCCce
Confidence 9999 888999999999999999999988877 89999999999999999999999 6777777654433211
Q ss_pred -------HHHHhcC---------CCCChhhHHHHhhc-----cccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCC
Q 021783 147 -------FLQNAEG---------SGLAPFDCWICLRG-----VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE 205 (307)
Q Consensus 147 -------~~~~~~~---------~~~~~~~~~~~~~~-----l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~ 205 (307)
...+..+ .+.+....+....+ -+.++++++++.++.+.+...++....-.-+..+.+
T Consensus 235 ~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~-- 312 (385)
T KOG2862|consen 235 SFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEEL-- 312 (385)
T ss_pred EEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhh--
Confidence 1111111 11222222222222 345678889999999999888886421100001100
Q ss_pred CCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEE
Q 021783 206 HPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRI 284 (307)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRi 284 (307)
.......+.++..-+-.++..++..+ ++...-|.. .. ..-.+||
T Consensus 313 ------------rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg-~~----------------------~gKv~RI 357 (385)
T KOG2862|consen 313 ------------RLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLG-PT----------------------VGKVFRI 357 (385)
T ss_pred ------------ccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccC-CC----------------------cccEEEE
Confidence 01223334443222344555554444 333332221 10 1345999
Q ss_pred Eec-----cCChHHHHHHHHHHHhcC
Q 021783 285 SVG-----IEDVNDLISDLDKALRTG 305 (307)
Q Consensus 285 s~~-----~~~~~~~i~~l~~~l~~~ 305 (307)
.+- .+.++..++.+..++++.
T Consensus 358 Gl~gcna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 358 GLLGCNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred EEeeccCCcHHHHHHHHHHHHHHhhc
Confidence 872 377888888888888764
No 238
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.80 E-value=3.9e-18 Score=150.09 Aligned_cols=249 Identities=14% Similarity=0.156 Sum_probs=152.4
Q ss_pred cCCCC----eEEEcCCCCcchHHHHhhhccc------C---CcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 11 LGTGE----EIVAGDDLYGGTDRLLSRVTPK------T---GVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 11 ~~~gd----~Vlv~~~~~~~~~~~~~~~~~~------~---g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
..+|| +|++.++.|++........... + ...+..++.+|++++++.+++++++|+++.++|++|...
T Consensus 113 ~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avivep~~~~~G~~~ 192 (389)
T PRK01278 113 YGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAILIEPIQGEGGIRP 192 (389)
T ss_pred HhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEEEecccCCCCCcC
Confidence 45676 8999999988775332211100 0 011234566799999999988999999999999998443
Q ss_pred ----cHHHHHHHHHHcCCEEEEeCccCC-CCcC---CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 78 ----DIRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 78 ----~~~~l~~~~~~~~~~li~D~a~~~-~~~~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
.+++|.++|++||+++|+|++|.. +... .....+.+.-+.|++|.++ +|.++|+++++++ +.+.+....
T Consensus 193 ~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~--~G~~ig~~~~~~~-~~~~~~~~~ 269 (389)
T PRK01278 193 APDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKGIG--GGFPLGACLATEE-AAKGMTPGT 269 (389)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehhcc--CCcceEEEEEcHH-HHhccCCCC
Confidence 499999999999999999999972 2111 1112233333568999995 5788999999855 433333222
Q ss_pred HhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEe
Q 021783 150 NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 227 (307)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 227 (307)
.......++..+..+.+.++.+.. ..+...+..+.+.+.++... . ..+.+ + ...++.+.++++.+
T Consensus 270 ~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~-------~---~~~~~--~-~~v~g~G~~~~i~~ 336 (389)
T PRK01278 270 HGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLV-------D---RFPDV--I-EEVRGKGLLLGLKC 336 (389)
T ss_pred CCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH-------h---hCCCc--e-eeEecccEEEEEEE
Confidence 222334555666666666654421 12333334444444443211 0 01100 0 01133566777766
Q ss_pred CCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 021783 228 GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 303 (307)
Q Consensus 228 ~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 303 (307)
.. ....+.+.|..+||.+.++. ++++|++++. +++++.++.|.++++
T Consensus 337 ~~--~~~~~~~~l~~~GV~~~p~~---------------------------~~~lR~~p~~~~~~~~i~~~l~~l~~~l~ 387 (389)
T PRK01278 337 VV--PNRDLVQALRDEGLLTVGAG---------------------------DNVVRLLPPLIITEEEIDEALERLERAAE 387 (389)
T ss_pred ec--CHHHHHHHHHHCCeEEeecC---------------------------CCEEEEeCCcccCHHHHHHHHHHHHHHHH
Confidence 43 35677777777788765432 3459999753 678888888888776
Q ss_pred c
Q 021783 304 T 304 (307)
Q Consensus 304 ~ 304 (307)
+
T Consensus 388 ~ 388 (389)
T PRK01278 388 S 388 (389)
T ss_pred h
Confidence 5
No 239
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.79 E-value=2.7e-17 Score=145.40 Aligned_cols=241 Identities=18% Similarity=0.174 Sum_probs=150.8
Q ss_pred CeEEEcCCCCcchHHHHhhh---------cccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc----HHH
Q 021783 15 EEIVAGDDLYGGTDRLLSRV---------TPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IRK 81 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~---------~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~----~~~ 81 (307)
++|++.+..|.+........ .......+..++..|++++++.+.+++++|++++++||+|.+.+ +++
T Consensus 133 ~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~ 212 (401)
T PRK00854 133 AEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTR 212 (401)
T ss_pred ceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCCHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHH
Confidence 67777776665543221111 11122456677888999999999989999999999999999986 999
Q ss_pred HHHHHHHcCCEEEEeCccC-CCCcCC-----ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCC
Q 021783 82 IAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 155 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~~-~~~~~~-----~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~ 155 (307)
|.++|++||+++|+|++|+ .+.... ......|+++. +|++++ ...++|+++++++.. +.+..........
T Consensus 213 l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~--~K~l~g-g~~~ig~v~~~~~~~-~~l~~~~~~~t~~ 288 (401)
T PRK00854 213 VRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLI--GKALSG-GFYPVSAVLSNSEVL-GVLKPGQHGSTFG 288 (401)
T ss_pred HHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEe--cccccC-CccCeEEEEEcHHHH-hcccCCCCCCCCC
Confidence 9999999999999999997 332211 11223577764 699954 335789999986543 3332211222223
Q ss_pred CChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEe-CCHHH
Q 021783 156 LAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLAL 232 (307)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 232 (307)
.++..++.....++.+.. ..+...+..+.+.+.|+.... ... ...++.+.++.+.+ ++...
T Consensus 289 ~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~~------~~~----------~~~~g~g~~~~i~~~~~~~~ 352 (401)
T PRK00854 289 GNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIRS------NIV----------REVRGRGLMLAVELEPEAGG 352 (401)
T ss_pred cCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhcc------Cce----------EEEeccceEEEEEEecCchh
Confidence 456667777777765533 233334444445555543210 000 01133567777766 33234
Q ss_pred HHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHH
Q 021783 233 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKAL 302 (307)
Q Consensus 233 ~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l 302 (307)
...+.+.|..+||.+... ..+++|++++. +++++.++.|.+.+
T Consensus 353 ~~~~~~~L~~~GV~v~~~---------------------------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 353 ARQYCEALKERGLLAKDT---------------------------HDHTIRLAPPLVITREQVDWALEQIAKVL 399 (401)
T ss_pred HHHHHHHHHHCCeEEecC---------------------------CCCEEEEeCCcccCHHHHHHHHHHHHHHh
Confidence 678888888888876421 13469999865 56666666666655
No 240
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.79 E-value=4.4e-17 Score=142.98 Aligned_cols=183 Identities=19% Similarity=0.167 Sum_probs=122.8
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC---------------CChHHHHhhcCCC----c
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---------------CDLDEVASAIGPW----T 61 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------------~d~~~l~~~l~~~----~ 61 (307)
+|+ .++.++++|||+| +++|.|.++. ..+...|++++.++. .|+++|++.++++ +
T Consensus 79 ~Al~la~~al~~pGD~V-~~~~~f~~~~----~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~ 153 (431)
T cd00617 79 GAENILFSILLKPGRTV-PSNMHFDTTR----GHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENI 153 (431)
T ss_pred HHHHHHHHHhCCCCCEE-ccCCcccchH----HHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCc
Confidence 355 5566789999988 5888888777 556788999998876 2689999999854 8
Q ss_pred eEEEEeCCCCCc-ccccc---HHHHHHHHHHcCCEEEEeCccCCC-----------CcC-Ccc------CCCccEEEecc
Q 021783 62 KLVWVESPTNPR-QQICD---IRKIAEMAHAHGALLLVDNSIMSP-----------VLS-RPL------ELGADIVMHSA 119 (307)
Q Consensus 62 ~~v~~~~~~n~t-G~~~~---~~~l~~~~~~~~~~li~D~a~~~~-----------~~~-~~~------~~~~d~~~~s~ 119 (307)
++|+++.|+||+ |.+++ +++|.++|++||+++|+|+++... ... ... ....|.++.|+
T Consensus 154 ~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~ 233 (431)
T cd00617 154 PYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSA 233 (431)
T ss_pred cEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEe
Confidence 899999999998 88885 668899999999999999996532 111 111 12478999999
Q ss_pred ccccccCCCceeEEEEEcChhHHHHHHHHH-HhcC----CCCChhhHHHHhhccccH--HHHHHHHHHHHHHHHHHHhcC
Q 021783 120 TKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAEG----SGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 120 ~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~ 192 (307)
+|..+.+. +|+++++++.+.+.+.... ...+ ..++.........+++.. ....++..++.+.+.+.|++.
T Consensus 234 ~K~~~~~~---GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~~~r~~l~~~L~~~ 310 (431)
T cd00617 234 KKDGLVNI---GGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVRYLGDRLDEA 310 (431)
T ss_pred ecCCCCcc---ceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC
Confidence 99875543 7899999876666554322 1111 122222222222244221 233444455556677777654
No 241
>PLN02271 serine hydroxymethyltransferase
Probab=99.78 E-value=7.2e-17 Score=142.21 Aligned_cols=185 Identities=19% Similarity=0.269 Sum_probs=127.8
Q ss_pred cHHHHHHHhcCCCCeEEEcCCCCcchHHHHh-----hhcccCCcEEEEec--CC------ChHHHHh-hcCCCceEEEEe
Q 021783 2 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLS-----RVTPKTGVVVKRVN--TC------DLDEVAS-AIGPWTKLVWVE 67 (307)
Q Consensus 2 aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~-----~~~~~~g~~~~~v~--~~------d~~~l~~-~l~~~~~~v~~~ 67 (307)
|..+++.++++|||+|+..+..|+++..... ..+...|..+..++ .+ |.+++++ +...++|+|++.
T Consensus 226 AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g 305 (586)
T PLN02271 226 ANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICG 305 (586)
T ss_pred HHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEEC
Confidence 4457788899999999999988887764321 12344565555544 32 8899998 556899999998
Q ss_pred CCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-----CccCCCccEEEeccccccccCCCceeEEEEEcChh--
Q 021783 68 SPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-- 140 (307)
Q Consensus 68 ~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~-- 140 (307)
+..+| ...|++++.++|+++|+++++|.+|..|.+. ++.. ++|++++|+|||+.||.| |+++++++.
T Consensus 306 ~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~-~aDvvt~TTHKtLrGPrG---G~I~~r~~~~~ 379 (586)
T PLN02271 306 GSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD-YCDIVTSTTHKSLRGPRG---GIIFYRKGPKL 379 (586)
T ss_pred chhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc-CCcEEEeCCcccCCCCCc---eEEEecccccc
Confidence 87887 7789999999999999999999999987764 2333 599999999999999885 777776531
Q ss_pred -----------------HHHHHHHHH-H-hcCCCCChhhH----HHHhhccccHHHHHHHHHHHHHHHHHHHhcC
Q 021783 141 -----------------LAKELYFLQ-N-AEGSGLAPFDC----WICLRGVKTMALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 141 -----------------~~~~~~~~~-~-~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
..+.+.... + ..++......+ .+.......+....++..+|++.|.+.|.++
T Consensus 380 ~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~ 454 (586)
T PLN02271 380 RKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR 454 (586)
T ss_pred cccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC
Confidence 212111111 1 11111111111 1111123355777888999999999999866
No 242
>PRK07505 hypothetical protein; Provisional
Probab=99.78 E-value=4.8e-17 Score=143.70 Aligned_cols=225 Identities=14% Similarity=0.109 Sum_probs=134.9
Q ss_pred CCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCCc---------CCcc
Q 021783 38 TGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL---------SRPL 108 (307)
Q Consensus 38 ~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~---------~~~~ 108 (307)
.+.+++.+|.+|++++++.+.++++++++++|+||+|.+.++++|.++|++||+++|+|++|+.+.+ ....
T Consensus 157 ~~~~v~~~~~~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~ 236 (402)
T PRK07505 157 DETEVETIDHNDLDALEDICKTNKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELD 236 (402)
T ss_pred cCCeEEEeCCCCHHHHHHHHhcCCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcC
Confidence 3578899999999999999987788999999999999999999999999999999999999853211 1111
Q ss_pred --CCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcC--CCCChhhHHHHhhccccHHHHHHHHHHHHHH
Q 021783 109 --ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG--SGLAPFDCWICLRGVKTMALRVEKQQDNAQK 184 (307)
Q Consensus 109 --~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 184 (307)
..+.+++++|++|.+++ + +|+++..++.+.+.+........ ..++......+...++.+. .+...+....
T Consensus 237 ~~~~d~~i~~~s~sK~~~~-~---Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~--~~~~~~~~~~ 310 (402)
T PRK07505 237 YRLNERTIIAASLGKAFGA-S---GGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHL--SEELDQLQQK 310 (402)
T ss_pred CCCCCCeEEEEechhhhhc-c---CeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHh--ccCcHHHHHH
Confidence 22456888999999953 3 57777655556555544322211 1222233333333332111 0111111222
Q ss_pred HHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCC-ceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccC
Q 021783 185 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG-SVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS 263 (307)
Q Consensus 185 l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~ 263 (307)
+.+.++..+.. .. ...++.+ .+..+.+++.+...++.+.|.++||.++.... |.
T Consensus 311 l~~~~~~~~~~---~~-------------~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------p~--- 365 (402)
T PRK07505 311 LQNNIALFDSL---IP-------------TEQSGSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFF------PV--- 365 (402)
T ss_pred HHHHHHHHHHH---HH-------------hcCCCCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeecC------CC---
Confidence 22222211000 00 0001122 23344445444477888888889998876432 10
Q ss_pred CCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 264 HASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
.+..++++|++++. ++++++++.|.+++++
T Consensus 366 -----------~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 366 -----------VAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred -----------CCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 00123579999974 6777777777776643
No 243
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.78 E-value=1.4e-17 Score=146.32 Aligned_cols=242 Identities=17% Similarity=0.159 Sum_probs=144.8
Q ss_pred CCCeEEEcCCCCcchHHHHhhhc---------ccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccc----cH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVT---------PKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC----DI 79 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~---------~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~----~~ 79 (307)
+||+|++++++|..+........ .....+...++.+|++++++.+++++++|++++++|++|... ++
T Consensus 114 ~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~~~~~~~l 193 (379)
T TIGR00707 114 EKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVNPASAEFL 193 (379)
T ss_pred CCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCccCCHHHH
Confidence 37999999999865542211110 111123445556689999999988899999998888888643 38
Q ss_pred HHHHHHHHHcCCEEEEeCccC-CCCcCC-----ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcC
Q 021783 80 RKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 153 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~-~~~~~~-----~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~ 153 (307)
++|.++|+++|+++|+|++|+ .+.... ......|+ .++||.+ + +|.|+|+++++++ +.+.+........
T Consensus 194 ~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~--~t~sK~~-~-~G~riG~~~~~~~-~~~~~~~~~~~~~ 268 (379)
T TIGR00707 194 KALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDI--ITLAKGL-G-GGVPIGATLAKEE-VAEAFTPGDHGST 268 (379)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCE--EEEcccc-c-CCcccEEEEEcHH-HHhhhcCCCCCCC
Confidence 999999999999999999996 221111 11122354 4689999 4 6889999998754 4444432212222
Q ss_pred CCCChhhHHHHhhccccHH--HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHH
Q 021783 154 SGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 231 (307)
Q Consensus 154 ~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (307)
...++..+..+.+.++.+. ...+...+..+.+.+.+++... . .... ..++.+.++++.+++.
T Consensus 269 ~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~---~~~~----------~~~~~g~~~~~~~~~~- 332 (379)
T TIGR00707 269 FGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGK--N---YPNK----------EVRGKGLMLGIELEAP- 332 (379)
T ss_pred CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh--h---CCCC----------ccccCceEEEEEecCc-
Confidence 2344455555555554332 2234444555555555543210 0 0000 0122466788887542
Q ss_pred HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 232 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 232 ~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
...+.+.|.+.||.++++. .+++|++++....++.++.+.+.|+
T Consensus 333 -~~~~~~~l~~~Gv~v~~~~---------------------------~~~lRi~~~~~~t~~~i~~~~~~l~ 376 (379)
T TIGR00707 333 -CKDIVKKALEKGLLVNCAG---------------------------PKVLRFLPPLIITKEEIDEAVSALE 376 (379)
T ss_pred -HHHHHHHHHHCCcEEeeCC---------------------------CCEEEEECCCcCCHHHHHHHHHHHH
Confidence 5678888888898776522 2459999865444444444444443
No 244
>PRK02769 histidine decarboxylase; Provisional
Probab=99.78 E-value=2.7e-17 Score=142.72 Aligned_cols=174 Identities=19% Similarity=0.253 Sum_probs=124.4
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCC---ceEEEEeCCCCCccccccHHHH
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPW---TKLVWVESPTNPRQQICDIRKI 82 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~---~~~v~~~~~~n~tG~~~~~~~l 82 (307)
..++++|++++.+|++.. ..++..|.+.+.++.+ |+++|++.++++ |.+|++++++|++|.+.|+++|
T Consensus 107 ~~~~~~ii~s~~~H~Sv~----ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I 182 (380)
T PRK02769 107 LFPDGTLYYSKDTHYSVS----KIARLLRIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEI 182 (380)
T ss_pred hCCCcEEEeCCCceehHH----HHHHHcCCCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHH
Confidence 367899999999999988 4445556665556542 899999999765 9999999999999999999999
Q ss_pred HHHHHHcC---CEEEEeCccCCCCcC--------CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH--
Q 021783 83 AEMAHAHG---ALLLVDNSIMSPVLS--------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-- 149 (307)
Q Consensus 83 ~~~~~~~~---~~li~D~a~~~~~~~--------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~-- 149 (307)
.++|+++| +++++|+||+.+..+ +... ++|.++.|+||++++|.| +|+++.+++.+........
T Consensus 183 ~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g--~G~l~~r~~~~~~~~~~~~yl 259 (380)
T PRK02769 183 QEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMP--CGIVLAKKKYVERISVDVDYI 259 (380)
T ss_pred HHHHHHhCCCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccCCCCCC--cEEEEEehhhhhhcccCcccc
Confidence 99999998 699999999987663 2223 899999999999977999 9999999765433211000
Q ss_pred -----HhcCCCC--ChhhHHHHhhcc--ccHHHHHHHHHHHHHHHHHHHhc
Q 021783 150 -----NAEGSGL--APFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLAS 191 (307)
Q Consensus 150 -----~~~~~~~--~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~ 191 (307)
...|+.. .....|..+..+ ..+....+...+.++++.+.++.
T Consensus 260 ~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~ 310 (380)
T PRK02769 260 GSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQA 310 (380)
T ss_pred CCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0112221 123344333322 33455556666667777777754
No 245
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.78 E-value=2.3e-18 Score=149.33 Aligned_cols=249 Identities=17% Similarity=0.163 Sum_probs=150.0
Q ss_pred HH-HHHHHhcC---CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------C-hHHHHhhcCCCceEEEEeCCCC
Q 021783 3 AL-AAVTHLLG---TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------D-LDEVASAIGPWTKLVWVESPTN 71 (307)
Q Consensus 3 al-~~~~~~~~---~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d-~~~l~~~l~~~~~~v~~~~~~n 71 (307)
|+ .++..+++ +||+|++.. | ..-+...++..|++++.++.+ + ++..+..+++++++|.++|.+|
T Consensus 75 a~~~~~~~l~~~~~~~~~i~~g~--~---~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t 149 (355)
T cd00611 75 QFAAVPLNLLGDKGTADYVVTGA--W---SAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNET 149 (355)
T ss_pred HHHHHHHhcCCCCCeEEEEECCH--H---HHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcc
Confidence 45 44555666 566665422 2 222234668889988888753 3 3333355678999999999999
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH---
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF--- 147 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~--- 147 (307)
.||...+ ++++.||+++++|++++.|..+ ++.+++ +++.|.||++ ||+| .|+++++++.+.+....
T Consensus 150 ~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~~idv~~~~--~~~ss~~K~l-GP~G--~g~l~~~~~~~~~~~~~~~~ 219 (355)
T cd00611 150 IHGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVSKFG--VIYAGAQKNL-GPAG--VTVVIVRKDLLGKARKITPS 219 (355)
T ss_pred cccEEcc-----eecccCCCeEEEEccccccCCCCCHHHhC--EEEeeccccc-CCCc--eEEEEECHHHHhhcccCCCC
Confidence 9999843 4555699999999999999988 777765 4667799998 6999 99999997765432110
Q ss_pred ---HHH--hc---CCCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 148 ---LQN--AE---GSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 148 ---~~~--~~---~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
... .. ..+++....+...++++. ++.+.++..+.++.+.+.+++.+++ +...
T Consensus 220 ~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl----~~~~---------- 285 (355)
T cd00611 220 MLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGF----YRGP---------- 285 (355)
T ss_pred cccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccc----cccC----------
Confidence 000 01 122222233333334432 3444455556666666667665421 1000
Q ss_pred hhccCCC-ceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChH
Q 021783 214 SQAKGAG-SVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVN 292 (307)
Q Consensus 214 ~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~ 292 (307)
..+..+. .+++|.+++......+.+.+...|+....|.. ..+.+|+|++..+.+
T Consensus 286 ~~~~~rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~-------------------------~~g~vR~S~~~~nt~ 340 (355)
T cd00611 286 VDKRARSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHR-------------------------SVGGIRASIYNALSL 340 (355)
T ss_pred CCHHHcCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCc-------------------------ccCeEEEEccCCCCH
Confidence 0001123 56889887642123443444445554222210 135699999987778
Q ss_pred HHHHHHHHHHhcC
Q 021783 293 DLISDLDKALRTG 305 (307)
Q Consensus 293 ~~i~~l~~~l~~~ 305 (307)
+.++.|.++|+++
T Consensus 341 edi~~l~~al~~~ 353 (355)
T cd00611 341 EGVQALADFMKEF 353 (355)
T ss_pred HHHHHHHHHHHHH
Confidence 8888887777653
No 246
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.78 E-value=8.7e-18 Score=148.40 Aligned_cols=244 Identities=16% Similarity=0.227 Sum_probs=148.0
Q ss_pred CeEEEcCCCCcchHHHHhhhcc---------cCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccc-ccc---HHH
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTP---------KTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQ-ICD---IRK 81 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~---------~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~-~~~---~~~ 81 (307)
++|++.++.|............ .....+..++.+|++++++.+.+++++|++++++||+|. ..+ +++
T Consensus 128 ~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vii~p~~~~~G~~~~~~~~l~~ 207 (396)
T PRK02627 128 PEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVMLEPIQGEGGVNPADKEYLQA 207 (396)
T ss_pred CeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEEEecccCCCCCccCCHHHHHH
Confidence 7899999888655422111110 001123445666999999999889999999999999994 443 899
Q ss_pred HHHHHHHcCCEEEEeCccC-CCCc---CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCC
Q 021783 82 IAEMAHAHGALLLVDNSIM-SPVL---SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 157 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~~-~~~~---~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (307)
|.++|++||+++|+|++|+ .+.. ......+.+.-+.++||.++ +|+++|+++++++ +.+.+...........+
T Consensus 208 l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~sK~~~--~G~rig~~~~~~~-~~~~~~~~~~~~t~~~~ 284 (396)
T PRK02627 208 LRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLAKGLG--GGVPIGAVLAKEK-VADVFTPGDHGSTFGGN 284 (396)
T ss_pred HHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEEEEcchhh--CCcccEEEEEcHH-HHhccCCCCCCCCCCCC
Confidence 9999999999999999997 2221 11112233222457999994 5889999999855 44433322122223345
Q ss_pred hhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHH
Q 021783 158 PFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKH 235 (307)
Q Consensus 158 ~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (307)
+..+..+...++.+.. ..++..+..+.+.+.+.+... . ++... ..++.+.++++.+.. ....
T Consensus 285 ~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~--~~~~~----------~~~~~g~~~~i~~~~--~~~~ 348 (396)
T PRK02627 285 PLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLE--K--YPGIK----------EVRGLGLMIGIELDR--PAAE 348 (396)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHH--h--CCCee----------eeccCcEEEEEEecC--cHHH
Confidence 5566666665553322 123333334444444432210 0 01110 113356778888732 3667
Q ss_pred HHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 236 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 236 ~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+.+.+..+||.+.++. .+++|++++. +++++.++.|.+++++
T Consensus 349 ~~~~l~~~Gv~v~~~~---------------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 349 IVKKALEKGLLINVTG---------------------------DNVLRLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred HHHHHHHCCeEEeecC---------------------------CCEEEEECCcccCHHHHHHHHHHHHHHHHh
Confidence 7788877788776532 2459998753 6777888888777764
No 247
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.77 E-value=7.2e-17 Score=143.79 Aligned_cols=259 Identities=19% Similarity=0.150 Sum_probs=152.4
Q ss_pred cHHHHHHHhcCCCCeEEEcCC---CCcchHHHHhhhcccCCcEEE----EecCC------ChHHHHhhcC-CCceEEEEe
Q 021783 2 AALAAVTHLLGTGEEIVAGDD---LYGGTDRLLSRVTPKTGVVVK----RVNTC------DLDEVASAIG-PWTKLVWVE 67 (307)
Q Consensus 2 aal~~~~~~~~~gd~Vlv~~~---~~~~~~~~~~~~~~~~g~~~~----~v~~~------d~~~l~~~l~-~~~~~v~~~ 67 (307)
|+++++.++++|||+|+..+. .|.+..... ...+..+.... .+.++ |.+++++.+. .++++|++.
T Consensus 112 AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~-~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~ 190 (475)
T PLN03226 112 ANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQT-DGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG 190 (475)
T ss_pred HHHHHHHHhCCCCCEEEECCCCcCcchhhhhhh-cccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe
Confidence 455788899999999998553 333322111 11122222211 23334 8999999886 577776653
Q ss_pred CCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-C----ccCCCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 68 SPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-R----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 68 ~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~----~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
.+ .+|...|+++|.++|+++|+++++|++|+.|... . +.. ++|++++|+|||+.||. +|+++++++...
T Consensus 191 -~S-~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~-~~Div~~t~hK~L~GP~---Gg~I~~~~~~~~ 264 (475)
T PLN03226 191 -AS-AYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE-YCDVVTTTTHKSLRGPR---GGMIFFRKGPKP 264 (475)
T ss_pred -cC-cCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC-CCeEEEecCcccccCCC---ceEEEEchhhcc
Confidence 23 3678889999999999999999999999988764 2 222 69999999999998887 588888764220
Q ss_pred ----------HH--HHHHHH--hcCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCC
Q 021783 143 ----------KE--LYFLQN--AEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL 203 (307)
Q Consensus 143 ----------~~--~~~~~~--~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l 203 (307)
+. ...... ...+++..........+++ .+....++..++++.+.+.+.+. ++ .+...+
T Consensus 265 ~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~-~l~~~~- 341 (475)
T PLN03226 265 PKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-GY-KLVTGG- 341 (475)
T ss_pred cccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-CC-EEEcCC-
Confidence 11 111111 1112233323333333333 23445677788888888888763 22 111111
Q ss_pred CCCCchHHHhhhccCCCceEEEEeC--CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCe
Q 021783 204 PEHPGHELHYSQAKGAGSVLSFLTG--SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDL 281 (307)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 281 (307)
....++.+.+. +. ...++.+.|...||.+..+..... ..| ..++.
T Consensus 342 --------------t~~hi~lv~~~~~gi-~~~~~~~~L~~~~I~~nk~~~p~~-~~~-----------------~~~~g 388 (475)
T PLN03226 342 --------------TDNHLVLWDLRPLGL-TGSRVEKVLDLAHITLNKNAVPGD-SSA-----------------LVPGG 388 (475)
T ss_pred --------------CCCCEEEEEccCCCC-CHHHHHHHHHHCCCEECCCCCCCC-ccc-----------------CCCCC
Confidence 01345555542 22 245566666677887766542100 001 11233
Q ss_pred EEEEe--------ccCChHHHHHHHHHHHh
Q 021783 282 VRISV--------GIEDVNDLISDLDKALR 303 (307)
Q Consensus 282 iRis~--------~~~~~~~~i~~l~~~l~ 303 (307)
+|++. +.+|++++.+.|.++++
T Consensus 389 iRiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 389 VRIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred cccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 77644 22778888888888876
No 248
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.77 E-value=1.6e-17 Score=147.51 Aligned_cols=248 Identities=15% Similarity=0.130 Sum_probs=152.0
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcc---------cCCcEEEEecCC-----------ChHHHHhhcCC---CceEEEEeC
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTP---------KTGVVVKRVNTC-----------DLDEVASAIGP---WTKLVWVES 68 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~---------~~g~~~~~v~~~-----------d~~~l~~~l~~---~~~~v~~~~ 68 (307)
.++++|++.++.|.+.......... ..+.+++.+|.+ |++++++.++. +++++++++
T Consensus 120 ~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p 199 (413)
T cd00610 120 TGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEP 199 (413)
T ss_pred cCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEcc
Confidence 5789999999988886543222211 123456777776 88999998874 678888888
Q ss_pred CCCCcccccc----HHHHHHHHHHcCCEEEEeCccCCC-CcC---CccCCCccEEEeccccccccCCCceeEEEEEcChh
Q 021783 69 PTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER 140 (307)
Q Consensus 69 ~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~~-~~~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~ 140 (307)
.++++|...+ +++|.++|++||+++|+|++|+.. ... ....++.+.-+.|++|++++ |+++|+++++++
T Consensus 200 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~~--g~~~g~~~~~~~- 276 (413)
T cd00610 200 IQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLGG--GLPLGAVLGREE- 276 (413)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeEEEcccccC--ccccEEEEEcHH-
Confidence 8888899887 999999999999999999999732 111 11122332234578899954 578999988754
Q ss_pred HHHHH--HHHHHhcCCCCChhhHHHHhhccccHH--HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhc
Q 021783 141 LAKEL--YFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 216 (307)
Q Consensus 141 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 216 (307)
+.+.+ ...........++..+..+...++.+. ...++..+..+.+.+.++..... .+. . ...
T Consensus 277 ~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~----~~~---------~-~~~ 342 (413)
T cd00610 277 IMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEK----HPL---------V-GDV 342 (413)
T ss_pred HHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhh----CCc---------E-EEe
Confidence 44433 111111122333444445444454332 22344444455555555432100 000 0 011
Q ss_pred cCCCceEEEEeCCH--------HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 217 KGAGSVLSFLTGSL--------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 217 ~~~~~~~~~~~~~~--------~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
++.++++++.+.+. .....+.+.+.++||.+.++. .+.+|++++.
T Consensus 343 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~---------------------------~~~lR~~~~~ 395 (413)
T cd00610 343 RGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG---------------------------GNVIRLLPPL 395 (413)
T ss_pred ecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC---------------------------CCEEEEECCC
Confidence 33578888888543 346778888888899776643 2349999987
Q ss_pred CChHHHHHHHHHHHh
Q 021783 289 EDVNDLISDLDKALR 303 (307)
Q Consensus 289 ~~~~~~i~~l~~~l~ 303 (307)
...++.++.+.+.++
T Consensus 396 ~~t~~~i~~~~~~l~ 410 (413)
T cd00610 396 IITEEEIDEGLDALD 410 (413)
T ss_pred cCCHHHHHHHHHHHH
Confidence 555555555555554
No 249
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.77 E-value=3.9e-17 Score=143.93 Aligned_cols=212 Identities=14% Similarity=0.155 Sum_probs=133.8
Q ss_pred EEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC-----CccCCC
Q 021783 42 VKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS-----RPLELG 111 (307)
Q Consensus 42 ~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~-----~~~~~~ 111 (307)
+..++.+|++++++.+++++++|++++++||+|...+ +++|.++|++||+++|+|++|. .+... ......
T Consensus 168 ~~~~~~~d~~~l~~~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~ 247 (396)
T PRK04073 168 IKKIPYGDLEALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVT 247 (396)
T ss_pred ceEeCCCCHHHHHHhcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCC
Confidence 4566777999999999888999999999999999986 8999999999999999999997 22211 111223
Q ss_pred ccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHH
Q 021783 112 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFL 189 (307)
Q Consensus 112 ~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l 189 (307)
.|++ +++|.++ .+|.++|+++++++ +.+.+...........++..+..+.+.++.+.. ..++..+..+.+.+.|
T Consensus 248 pdi~--~~sK~lg-~gg~~ig~~~~~~~-i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L 323 (396)
T PRK04073 248 PDMY--ILGKALG-GGVFPISCVAANRD-ILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQL 323 (396)
T ss_pred CCEE--Eeccccc-CCCCcceEEEEcHH-HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 4554 5789994 46678999999855 433332211122223455566666666654321 1233333444455555
Q ss_pred hcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcH
Q 021783 190 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 269 (307)
Q Consensus 190 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~ 269 (307)
++.. .+.+. ..++.+.++.+.+.. ....+.+.|.++||.+...
T Consensus 324 ~~l~------~~~i~----------~~~~~g~~~~~~~~~--~~~~~~~~l~~~Gv~~~~~------------------- 366 (396)
T PRK04073 324 KEID------NPMIK----------EVRGRGLFIGVELNE--PARPYCEALKEEGLLCKET------------------- 366 (396)
T ss_pred Hhhc------CCccc----------ceecceEEEEEEecc--hHHHHHHHHHHCCeEEecC-------------------
Confidence 4321 11111 113456777777753 3567777787788866421
Q ss_pred HHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHH
Q 021783 270 EVRQARGLTEDLVRISVGI----EDVNDLISDLDKAL 302 (307)
Q Consensus 270 ~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l 302 (307)
.++++|+++++ ++++++++.|.+++
T Consensus 367 --------~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 367 --------HETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred --------CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 13469999765 56666666666554
No 250
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.76 E-value=5.8e-17 Score=134.18 Aligned_cols=244 Identities=17% Similarity=0.189 Sum_probs=174.0
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC----CCceEEEEeCCCCCccccccHHHHHHHHH
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKIAEMAH 87 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~~~~l~~~~~ 87 (307)
=||-+|......|.++. +-++..+++-..+.++|+++|++.+. +.+|+|.++++++++|.++|++||+++++
T Consensus 255 lpgcei~SD~gNHASMI----~GIrns~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah 330 (570)
T KOG1360|consen 255 LPGCEIFSDEGNHASMI----QGIRNSRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAH 330 (570)
T ss_pred CCCcEEeccccchHHHH----HHhhhcCCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHH
Confidence 37888888888998888 67788899888889999999999986 46899999999999999999999999999
Q ss_pred HcCCEEEEeCccCCCCcC---------CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcC--CCC
Q 021783 88 AHGALLLVDNSIMSPVLS---------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG--SGL 156 (307)
Q Consensus 88 ~~~~~li~D~a~~~~~~~---------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~--~~~ 156 (307)
+||.+.++|++|+.|.+. +..-...|++.+++.|.|++. +|++..... +...++.+..... .++
T Consensus 331 ~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcV----GGYIAat~~-LvDmiRSyAaGFIFTTSL 405 (570)
T KOG1360|consen 331 KYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCV----GGYIAATRK-LVDMIRSYAAGFIFTTSL 405 (570)
T ss_pred HhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhcccc----cceehhhhh-HHHHHHHhcCceEEecCC
Confidence 999999999999876543 111224799999999999543 799888755 5566776665443 345
Q ss_pred ChhhHHHHhhccccH-----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHH
Q 021783 157 APFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 231 (307)
Q Consensus 157 ~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (307)
++....-++.+.+.+ ....++++.+.+.+.+.|.+.. .|-+ ...+.++-+.+.+..
T Consensus 406 PP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~G------iPVi-------------~~pSHIiPv~vgda~ 466 (570)
T KOG1360|consen 406 PPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELG------IPVI-------------PNPSHIIPVRVGDAA 466 (570)
T ss_pred ChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcC------Cccc-------------CCCcceeeeeccCHH
Confidence 554433333333221 2224556777888888887542 2221 113567888887766
Q ss_pred HHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 232 LSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 232 ~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
......+.| ..++|.|..=. .|... .+...+||.+.-.++.+.++.|.+.+.
T Consensus 467 l~~~~sd~Li~~h~iYvQaIN------yPTV~--------------rG~E~LRiaPTP~HT~~mm~~lv~~l~ 519 (570)
T KOG1360|consen 467 LAKQASDILISKHNIYVQAIN------YPTVA--------------RGTERLRIAPTPHHTPQMMNILVNALL 519 (570)
T ss_pred HHHHHHHHHHHhcCeEEEecc------CCccc--------------ccceeeecCCCCCCCHHHHHHHHHHHH
Confidence 566665554 45688776532 23221 124559999988788888888877764
No 251
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.76 E-value=6.8e-18 Score=146.34 Aligned_cols=254 Identities=12% Similarity=0.086 Sum_probs=149.5
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHH
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
+++.+++. ++.+++....|.+....+.......+ ++..++.+..+.++..+.+++++|.++|.+|.||...|+++|
T Consensus 75 ~~~~~l~~-~~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I-- 150 (361)
T TIGR01366 75 AATFGLIE-KKSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPGSAPEPQADPGVDVIAWAHNETSTGVAVPVRRP-- 150 (361)
T ss_pred HHHHhccc-ccccEEecCHHHHHHHHHHHhhhccC-CceEEecCCCCCCCCccCCCCCEEEEcccCCccceecccccc--
Confidence 34445553 24445556666555544444332233 555555443344555566899999999999999999999887
Q ss_pred HHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH---------H---H--
Q 021783 85 MAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF---------L---Q-- 149 (307)
Q Consensus 85 ~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~---------~---~-- 149 (307)
++++|+++++|++++.|..+ +... +|++++|.+|++++++| .++++.+++.+.+.... . .
T Consensus 151 -~~~~g~~~iVDavqs~g~~~idv~~--~D~~~~s~~K~lg~~~G--l~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~ 225 (361)
T TIGR01366 151 -EGSDDALVVIDATSGAGGLPVDIAE--TDVYYFAPQKNFASDGG--LWLAIMSPAALERIEAIAASGRWVPEFLSLPTA 225 (361)
T ss_pred -cccCCCeEEEEcCccccCCCCCHHH--CCEEEEEchhhcCCCCc--eEEEEECHHHHhhhhcccCCCCCCchhhhHHHH
Confidence 58899999999999999987 6554 89999999999987766 77777786655332110 0 0
Q ss_pred --H----hcCCCCChhhHHHHhhccc------cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhcc
Q 021783 150 --N----AEGSGLAPFDCWICLRGVK------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 217 (307)
Q Consensus 150 --~----~~~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (307)
. ...++++....+....+++ .++.+.++..+.++.+.+.++....+.-+ ... +.. ..
T Consensus 226 ~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~-~~~----~~~------~s 294 (361)
T TIGR01366 226 VDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPF-VTD----PGK------RS 294 (361)
T ss_pred HhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccC-CCC----hhh------cc
Confidence 0 0112222222222222332 24445566677777777777766532111 000 000 00
Q ss_pred CCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHH
Q 021783 218 GAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISD 297 (307)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~ 297 (307)
.....+.| .++. +...+.+.|+.+||.+..|.. . . ..+.+|+|+.....++.++.
T Consensus 295 ~~v~~v~~-~~g~-~~~~v~~~L~~~gI~i~~~~~-~--------------------l--~~~~vRis~~~~~t~~di~~ 349 (361)
T TIGR01366 295 QVVGTIDF-VDDI-DAATVAKILRANGIVDTEPYR-K--------------------L--GRNQLRVAMFPAIDPDDVEA 349 (361)
T ss_pred cceEEEEC-CCcc-CHHHHHHHHHHCCCeeccCcc-c--------------------c--CCCcEEEEcCCCCCHHHHHH
Confidence 11244555 2443 477788888888987754321 0 1 13469999986444444444
Q ss_pred HHHHHh
Q 021783 298 LDKALR 303 (307)
Q Consensus 298 l~~~l~ 303 (307)
|.++|+
T Consensus 350 l~~al~ 355 (361)
T TIGR01366 350 LTECVD 355 (361)
T ss_pred HHHHHH
Confidence 444443
No 252
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.75 E-value=8e-17 Score=141.04 Aligned_cols=174 Identities=15% Similarity=0.145 Sum_probs=124.6
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--------CChHHHHhhcCC---CceEEEEeCCC-CCccccccHH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIGP---WTKLVWVESPT-NPRQQICDIR 80 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--------~d~~~l~~~l~~---~~~~v~~~~~~-n~tG~~~~~~ 80 (307)
+||+|+++..+|.+.. .++...|++++.+|. .|++++++++++ ++.++++.+++ +++|...|++
T Consensus 150 ~gd~VI~p~~th~S~~----kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~ 225 (444)
T TIGR03531 150 KAKYVIWPRIDQKSCI----KAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIE 225 (444)
T ss_pred CCCEEEEECcChHHHH----HHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHH
Confidence 6899999999998888 778889999999994 189999999974 45666666554 4456788999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcC------CccCCC-ccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcC
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLS------RPLELG-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 153 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~------~~~~~~-~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~ 153 (307)
+|.++|++||+++|+|+||+.+... .....| +|++++|+||++..+.+ +|+++.+++.+.+.+........
T Consensus 226 eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~y~g~~ 303 (444)
T TIGR03531 226 EIAKICANYDIPHIVNNAYGLQSNKYMELINKAIKVGRVDAVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKSYPGRA 303 (444)
T ss_pred HHHHHHHHcCCEEEEECcCcCcChhhhhhhhccccccCCCeEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHhccCCC
Confidence 9999999999999999999965432 222344 69999999999976666 78888877777665554322211
Q ss_pred CCCChhhHHH--HhhccccHHHHHHHHHHHHHHHHHHHhcC
Q 021783 154 SGLAPFDCWI--CLRGVKTMALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 154 ~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
........|+ ...+.+.++...++..++++.+.+.|++.
T Consensus 304 ~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l 344 (444)
T TIGR03531 304 SASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKL 344 (444)
T ss_pred CChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111222232 22344666666777777777777777654
No 253
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.75 E-value=1.6e-16 Score=140.45 Aligned_cols=221 Identities=17% Similarity=0.240 Sum_probs=137.0
Q ss_pred cEEEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccCC-CCcC---CccCCC
Q 021783 40 VVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLELG 111 (307)
Q Consensus 40 ~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~-~~~~---~~~~~~ 111 (307)
.+++.++.+|++++++.+.+++++|+++.++++.|...+ +++|.++|++||+++|+||+|+. +... .....+
T Consensus 164 ~~~~~~~~~d~~~l~~~l~~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~ 243 (403)
T PRK05093 164 ADITHVPFNDLAAVKAVIDDHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYG 243 (403)
T ss_pred CCcEEeCCCCHHHHHHHhcCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcC
Confidence 356777888999999999888999999954444444332 99999999999999999999872 1111 111233
Q ss_pred ccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHH--HHHHHHHHHHHHHHHHH
Q 021783 112 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFL 189 (307)
Q Consensus 112 ~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l 189 (307)
.+.-+.|++|.++ +|.++|+++++++ +.+.+...........++..+..+...++.+. ...++..+..+.+.+.|
T Consensus 244 ~~pdi~s~sK~l~--~G~rig~vv~~~~-i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L 320 (403)
T PRK05093 244 VTPDILTSAKALG--GGFPIGAMLTTAE-IASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGL 320 (403)
T ss_pred CCCCEEEeccccc--CCcceEEEEEcHH-HHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 3333678999995 5899999999855 43433322222223345555665555554332 22344445555555555
Q ss_pred hcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH--HHHHHHHhcCCcceeecCCCCccceeecccccCCCCC
Q 021783 190 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 267 (307)
Q Consensus 190 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~ 267 (307)
++... . +. ++ ...++.+.++++.+.+. ....++.+.+..+|+.+..+.
T Consensus 321 ~~~~~--~--~~---------~~-~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g---------------- 370 (403)
T PRK05093 321 QKINQ--K--YG---------VF-SEIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVAG---------------- 370 (403)
T ss_pred HHHHh--h--CC---------Ce-EeEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEecCC----------------
Confidence 54310 0 00 00 01233567788887532 246678888877888765421
Q ss_pred cHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 268 PVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 268 ~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
++++|++++. +++++.++.|.+++++
T Consensus 371 -----------~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~ 400 (403)
T PRK05093 371 -----------PDVLRFAPSLVIEEADIDEGLARFEKAVAK 400 (403)
T ss_pred -----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3469998765 6677777777777654
No 254
>PLN03032 serine decarboxylase; Provisional
Probab=99.74 E-value=2.3e-16 Score=135.95 Aligned_cols=174 Identities=18% Similarity=0.199 Sum_probs=129.0
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC---CceEEEEeCCCCCccccccHHHHH
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP---WTKLVWVESPTNPRQQICDIRKIA 83 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~~~~l~ 83 (307)
.+++.|+++..+|++.. ..++..|..++.+|.+ |+++|++++++ +|.+|+++..+|++|.+.|+++|+
T Consensus 109 ~~~~~vi~s~~~H~Sv~----kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~ 184 (374)
T PLN03032 109 FPDGILYASRESHYSVF----KAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRIL 184 (374)
T ss_pred CCCcEEEeCCCceeHHH----HHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHH
Confidence 35678999999999998 5566677777777754 89999999975 577888999999999999999999
Q ss_pred HHHHHcC-----CEEEEeCccCCCCcCC-------ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH--
Q 021783 84 EMAHAHG-----ALLLVDNSIMSPVLSR-------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-- 149 (307)
Q Consensus 84 ~~~~~~~-----~~li~D~a~~~~~~~~-------~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~-- 149 (307)
++|+++| +++++|+|++.+..+. ....++|.++.|+||+++.|.| +|+++.+++.+.. +....
T Consensus 185 ~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g--~G~ll~r~~~~~~-~~~~~~Y 261 (374)
T PLN03032 185 RILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMP--CGVALTRKKHVKA-LSQNVEY 261 (374)
T ss_pred HHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcC--eEEEEEEchhhHh-hccCCcc
Confidence 9999996 5899999998765441 1123689999999999966998 9999999764432 21100
Q ss_pred ------HhcCCCC--ChhhHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcC
Q 021783 150 ------NAEGSGL--APFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 150 ------~~~~~~~--~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
...++.. .....|..+. +.+.+....++..+.++++.+.+++.
T Consensus 262 l~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~ 314 (374)
T PLN03032 262 LNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA 314 (374)
T ss_pred cCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 1122222 2244444433 34667777888888888888888764
No 255
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.73 E-value=1.5e-16 Score=140.68 Aligned_cols=248 Identities=13% Similarity=0.142 Sum_probs=146.9
Q ss_pred CCCeEEEcCCCCcchHHHHhhhccc---------CCcEEEEecCCChHHHHhhcC-CCceEEEEeCCCCCcccccc----
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPK---------TGVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICD---- 78 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~---------~g~~~~~v~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~---- 78 (307)
.+++|++.+..|.+.....-..... ..-.+..++.+|++++++.+. +++++|++++++||+|.+.+
T Consensus 121 ~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~ 200 (400)
T PTZ00125 121 NQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGY 200 (400)
T ss_pred CCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHH
Confidence 3577887777766654321111110 001234566679999999996 78999999999999999987
Q ss_pred HHHHHHHHHHcCCEEEEeCccC-CCCc---CCc--cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhc
Q 021783 79 IRKIAEMAHAHGALLLVDNSIM-SPVL---SRP--LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 152 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~--~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~ 152 (307)
+++|.++|++||+++|+|++|+ .|.. ... .....|+++ ++|++++ ++.++|+++++++ +.+.+.......
T Consensus 201 l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~--~sK~l~~-g~~~ig~v~~~~~-~~~~~~~~~~~~ 276 (400)
T PTZ00125 201 LKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVL--LGKALSG-GLYPISAVLANDD-VMLVIKPGEHGS 276 (400)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEE--EcccccC-CCcCcEEEEEcHH-HHhhccCCCCCC
Confidence 9999999999999999999985 2211 111 112346654 6799953 3336899999865 433332221122
Q ss_pred CCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-
Q 021783 153 GSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS- 229 (307)
Q Consensus 153 ~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~- 229 (307)
.....+..+..+...++.+.. ..++..+..+.+.+.+++.. ...+.+ ...++.+.++++.++.
T Consensus 277 t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~----------~~~~~~----~~~~~~g~~~~v~~~~~ 342 (400)
T PTZ00125 277 TYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELL----------KKSPWV----KEIRGKGLLNAIVFDHS 342 (400)
T ss_pred CCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----------hcCCCe----EEEecccEEEEEEEccC
Confidence 223344555555554543321 11222233333344443210 000000 0012346677777743
Q ss_pred -HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 230 -LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 230 -~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
......+.+.|.++||.+.++. .+++|++++. +++++.++.|.+++++
T Consensus 343 ~~~~~~~~~~~l~~~Gv~v~~~~---------------------------~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~ 395 (400)
T PTZ00125 343 DGVNAWDLCLKLKENGLLAKPTH---------------------------DNIIRFAPPLVITKEQLDQALEIIKKVLKS 395 (400)
T ss_pred cchHHHHHHHHHHHCCeEEeecC---------------------------CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 2346777888877888765421 3459999754 6788888888887765
Q ss_pred C
Q 021783 305 G 305 (307)
Q Consensus 305 ~ 305 (307)
+
T Consensus 396 ~ 396 (400)
T PTZ00125 396 F 396 (400)
T ss_pred H
Confidence 4
No 256
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.73 E-value=7.5e-17 Score=125.19 Aligned_cols=129 Identities=28% Similarity=0.324 Sum_probs=103.8
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCC-----h--HHHHhhc-CCCceEEEEeCCCCCc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCD-----L--DEVASAI-GPWTKLVWVESPTNPR 73 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d-----~--~~l~~~l-~~~~~~v~~~~~~n~t 73 (307)
|+ .++.++.++|++|+++++.|++... ..+...|++++.++.++ . +++++.. .++++++++++++|++
T Consensus 29 a~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 105 (170)
T cd01494 29 ANEAALLALLGPGDEVIVDANGHGSRYW---VAAELAGAKPVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSG 105 (170)
T ss_pred HHHHHHHHhCCCCCEEEEeecccceehh---hHHHhcCCEEEEeccCCCCccchhhhhhhhccccCceEEEEEecCcCCC
Confidence 44 4555667789999999999988873 34577899999988741 1 2444443 4789999999999999
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccCCCCcC----CccCCCccEEEeccccccccCCCceeEEEEEc
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIMSPVLS----RPLELGADIVMHSATKFIAGHSDVMAGVLAVK 137 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~ 137 (307)
|...|.++|.++|+++|+++|+|++|+.+... +....++|+++.|+||++++ ++ +|++++|
T Consensus 106 g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s~~K~~~~-~~--~G~l~~~ 170 (170)
T cd01494 106 GVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKNLGG-EG--GGVVIVK 170 (170)
T ss_pred CeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEEcccccCC-Cc--eEEEEeC
Confidence 99999999999999999999999999876654 35556899999999999976 55 8998875
No 257
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.73 E-value=4.1e-16 Score=136.78 Aligned_cols=241 Identities=15% Similarity=0.155 Sum_probs=146.4
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCC---------cEEEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc----HH
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTG---------VVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IR 80 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g---------~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~----~~ 80 (307)
+++|++.++.|.+............. ..+..++.+|++++++.+.+++++|+++++++++|...+ ++
T Consensus 112 ~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~G~~~~~~~~l~ 191 (377)
T PRK02936 112 KSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGEGGVIPADPAFLQ 191 (377)
T ss_pred CCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCCCCCccCCHHHHH
Confidence 46788888777654322111111100 134566777999999999888999999999998887742 99
Q ss_pred HHHHHHHHcCCEEEEeCccCC-CCcC---CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCC
Q 021783 81 KIAEMAHAHGALLLVDNSIMS-PVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 156 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~-~~~~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 156 (307)
+|.++|++||+++|+|++|.. +... ....++.+.-+.+++|.++ +|+++|+++++++ +.+.+...........
T Consensus 192 ~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~--~G~~ig~v~~~~~-~~~~~~~~~~~~t~~~ 268 (377)
T PRK02936 192 EVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKGLG--NGIPVGAMIGKKE-LGTAFGPGSHGSTFGG 268 (377)
T ss_pred HHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEccccc--CCCccEEEEEcHH-HHhhccCCCCCCCCCC
Confidence 999999999999999999952 1111 1112232222457999994 5788999998754 4444432222222334
Q ss_pred ChhhHHHHhhccccHH--HHHHHHHHHHHHHHHHHhcC-CCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHH
Q 021783 157 APFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALS 233 (307)
Q Consensus 157 ~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (307)
++..+..+.+.++.+. ...++..++.+.+.+.|++. ++. +.+. ..++.+.++++.+.+. .
T Consensus 269 ~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-----~~~~----------~v~~~g~~~~i~~~~~--~ 331 (377)
T PRK02936 269 NPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHL-----ECVK----------NIRGKGLMIGIECTEE--V 331 (377)
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhC-----CcEE----------eEeecceEEEEEecch--H
Confidence 5566666666665442 23445555555566655532 100 1000 0123466788888643 5
Q ss_pred HHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHH
Q 021783 234 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKA 301 (307)
Q Consensus 234 ~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~ 301 (307)
..+.+.+.++||.+..+. ++++|++++. +++++.++.|.++
T Consensus 332 ~~~~~~l~~~gv~v~~~g---------------------------~~~lRi~p~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 332 APVIEQLREEGLLVLSAG---------------------------PNVIRLLPPLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred HHHHHHHHHCCeEEecCC---------------------------CCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 677778888888765422 3459999754 4555555555543
No 258
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.72 E-value=2.9e-16 Score=149.17 Aligned_cols=175 Identities=25% Similarity=0.263 Sum_probs=120.6
Q ss_pred CCCC----eEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC---CceEEEEeCCCCCcccc-cc
Q 021783 12 GTGE----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP---WTKLVWVESPTNPRQQI-CD 78 (307)
Q Consensus 12 ~~gd----~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~---~~~~v~~~~~~n~tG~~-~~ 78 (307)
++|| +|++++..|++.. ..+...|++++.++.+ |+++|++.+++ ++.+|++++|++. |.. .|
T Consensus 584 ~~G~~~r~~vlis~~aH~snp----~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~-G~~e~~ 658 (954)
T PRK05367 584 SRGEGHRDVCLIPSSAHGTNP----ASAVMAGMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTH-GVFEET 658 (954)
T ss_pred ccCCCCCCEEEEEchhhhhhH----HHHHHCCCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCC-eeecCC
Confidence 5665 5999999998887 4567789999999874 78999999864 5788889998886 554 68
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCc--CCccCCCccEEEeccccccccCCCce---eEEEEEcChhHHHHHHHHH----
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVL--SRPLELGADIVMHSATKFIAGHSDVM---AGVLAVKGERLAKELYFLQ---- 149 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~--~~~~~~~~d~~~~s~~K~~~g~~g~~---~G~~~~~~~~~~~~~~~~~---- 149 (307)
+++|+++||++|+++++|+++..+.. ..+..+|+|++++|+||||+.|.|.- .|++.+++. +...+....
T Consensus 659 I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~-l~p~lpg~~v~~~ 737 (954)
T PRK05367 659 IREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH-LAPFLPGHPVQIA 737 (954)
T ss_pred HHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeeccc-ccccCCCCccCcC
Confidence 99999999999999999999975533 35668899999999999985444311 668888743 222111110
Q ss_pred Hh---cCCCC-Ch---------hhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcC
Q 021783 150 NA---EGSGL-AP---------FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 150 ~~---~~~~~-~~---------~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
.. .+... +. ...++...|.+.++...+....+++++.+.|+..
T Consensus 738 ~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~ 793 (954)
T PRK05367 738 GGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH 793 (954)
T ss_pred CCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 00 01000 10 1122223344556666666667888888888654
No 259
>PLN02880 tyrosine decarboxylase
Probab=99.71 E-value=6e-16 Score=138.60 Aligned_cols=173 Identities=16% Similarity=0.207 Sum_probs=121.8
Q ss_pred eEEEcCCCCcchHHHHhhhcccCCcE---EEEecCC-------ChHHHHhhcCC------CceEEEEeCCCCCccccccH
Q 021783 16 EIVAGDDLYGGTDRLLSRVTPKTGVV---VKRVNTC-------DLDEVASAIGP------WTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 16 ~Vlv~~~~~~~~~~~~~~~~~~~g~~---~~~v~~~-------d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~~ 79 (307)
.|++++..|.+.. +++...|+. ++.||.+ |+++|++++.. .+-+|+.+..+..+|.+.|+
T Consensus 183 vv~~S~~aH~Sv~----Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl 258 (490)
T PLN02880 183 VVYASDQTHSALQ----KACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPL 258 (490)
T ss_pred EEEEcCCchHHHH----HHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcH
Confidence 5668888998888 667777873 5555552 78899888852 35677777888899999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCC------ccC-CCccEEEeccccccccCCCceeEEEEEcChhHH-HHHHHHHHh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSR------PLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYFLQNA 151 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~------~~~-~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~-~~~~~~~~~ 151 (307)
++|.++|++||+|+++|+||+.+.... ... .++|.++.++|||++.|.+ +|++++++.... +.+.....+
T Consensus 259 ~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~--~g~llvr~~~~l~~~~~~~~~Y 336 (490)
T PLN02880 259 LELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFD--CSLLWVKDRNALIQSLSTNPEF 336 (490)
T ss_pred HHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCcc--EEEEEEeCHHHHHHHHccCHHH
Confidence 999999999999999999998764422 122 2689999999999999988 999999864321 211110000
Q ss_pred --------------------cCCCCChhhHHHH--hhccccHHHHHHHHHHHHHHHHHHHhcCCC
Q 021783 152 --------------------EGSGLAPFDCWIC--LRGVKTMALRVEKQQDNAQKIAEFLASHPR 194 (307)
Q Consensus 152 --------------------~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~ 194 (307)
.+........|+. ..|.+.+..+.++..+.++++.+.+++.+.
T Consensus 337 l~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~ 401 (490)
T PLN02880 337 LKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSR 401 (490)
T ss_pred hcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 0011112334433 335566777777777888888888876654
No 260
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.70 E-value=9e-17 Score=135.31 Aligned_cols=219 Identities=19% Similarity=0.261 Sum_probs=154.3
Q ss_pred EEEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC----CCCcCCccCCCc
Q 021783 41 VVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM----SPVLSRPLELGA 112 (307)
Q Consensus 41 ~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~----~~~~~~~~~~~~ 112 (307)
.++.+|.+|+++++++++++|.+|+++..+-..|++.+ ++++.++|++||+++|.||+|. +|.+.....+|+
T Consensus 165 g~~~vpfnDi~al~~ai~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV 244 (404)
T COG4992 165 GFRHVPFNDIEALEAAIDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGV 244 (404)
T ss_pred CceecCCCCHHHHHHHhccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCC
Confidence 45667778999999999999999999999999999975 9999999999999999999995 455555555676
Q ss_pred cEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHH----H
Q 021783 113 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAE----F 188 (307)
Q Consensus 113 d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~----~ 188 (307)
.--+.++.|.++| |+.+|.++.+ +...+.+......+...-.+..+....+.++.+.. +...++.+++.+ .
T Consensus 245 ~PDI~tlaK~LgG--G~PigA~la~-~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~--e~ll~~v~~~g~~~~~~ 319 (404)
T COG4992 245 EPDILTLAKALGG--GFPIGAMLAT-EEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLE--EGLLENVREKGEYLLQR 319 (404)
T ss_pred CCCEEEeeccccC--CccceeeEEc-hhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcc--hhHHHHHHHHHHHHHHH
Confidence 6666669999964 5779999988 44444433333334444556667766666654422 333444444433 3
Q ss_pred HhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCc
Q 021783 189 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIP 268 (307)
Q Consensus 189 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~ 268 (307)
|++.. ..++.+.+. ++.|-++.+.+.....+..+.+.+..+|+.+...+
T Consensus 320 L~~l~----~~~~~v~~v----------RG~GLmiGiel~~~~~a~~~~~~~~~~gvL~~~a~----------------- 368 (404)
T COG4992 320 LRELK----RRYPLVKEV----------RGRGLMIGIELKEPYRARDIVRALREEGVLVLPAG----------------- 368 (404)
T ss_pred HHHHh----hcCCceeee----------ecceeEEEEEecCcccHHHHHHHHHHCCeEEecCC-----------------
Confidence 33321 111112222 77889999999655458888899999998765432
Q ss_pred HHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 269 VEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 269 ~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
++.+|+.+.+ +++++.++.|.++++..
T Consensus 369 ----------~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~ 399 (404)
T COG4992 369 ----------PNVIRFLPPLVITEEEIDEALDALERALAAA 399 (404)
T ss_pred ----------CCeEEecCCccCCHHHHHHHHHHHHHHHHHh
Confidence 2348888875 89999999999998753
No 261
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.70 E-value=3.3e-15 Score=128.36 Aligned_cols=223 Identities=21% Similarity=0.169 Sum_probs=130.6
Q ss_pred cHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhccc-------CCcEEEEecCC------ChHHHHhhcC-CCceEEEEe
Q 021783 2 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK-------TGVVVKRVNTC------DLDEVASAIG-PWTKLVWVE 67 (307)
Q Consensus 2 aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~-------~g~~~~~v~~~------d~~~l~~~l~-~~~~~v~~~ 67 (307)
|+++++.++++|||+|+..+..+++....- ..... ...+.+.++.+ |.+++++.+. .++++|++.
T Consensus 98 An~av~~aLl~pGD~Im~l~l~~GGHlshg-~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G 176 (399)
T PF00464_consen 98 ANLAVYMALLKPGDTIMGLSLPHGGHLSHG-SSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICG 176 (399)
T ss_dssp HHHHHHHHHT-TT-EEEEEEGGGT--GGGT--TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE
T ss_pred HHHHHHHHHHhhcCcEEecChhhccccccc-ccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEEC
Confidence 456788899999999998887665543110 00011 12344444432 8888888876 588999987
Q ss_pred CCCCCccccccHHHHHHHHHHcCCEEEEeCccC-----CCCcCCccCCCccEEEeccccccccCCCceeEEEEEc-----
Q 021783 68 SPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM-----SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVK----- 137 (307)
Q Consensus 68 ~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~-----~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~----- 137 (307)
..++| ...|.+++.++|++.|+++++|.+|- .|.++++..+ +|++++|+||+|.||. +|+++++
T Consensus 177 ~S~y~--~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-ADvvt~sThKtl~GPr---ggiI~~~~~~~~ 250 (399)
T PF00464_consen 177 ASSYP--RPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-ADVVTGSTHKTLRGPR---GGIILTNKGSKN 250 (399)
T ss_dssp -SSTS--S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-SSEEEEESSGGG-SSS----EEEEES-SEEE
T ss_pred chhcc--CccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc-ceEEEeeccccccccC---ceEEEEcCCccc
Confidence 65554 67899999999999999999999995 5677788876 9999999999998887 7999999
Q ss_pred --------ChhHHHHHHHHHHhcC-CCCCh-----hhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCC
Q 021783 138 --------GERLAKELYFLQNAEG-SGLAP-----FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL 203 (307)
Q Consensus 138 --------~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l 203 (307)
++.+.+.+....-... +.+.. ....+..+.-..+....++..+|++.|.+.|.++.- .+.. +
T Consensus 251 ~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~--~v~~-g- 326 (399)
T PF00464_consen 251 VDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERGF--KVVT-G- 326 (399)
T ss_dssp E-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT---EEGG-G-
T ss_pred cCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCc--EEEE-C-
Confidence 4556555554332211 11111 111111211224677788899999999999987631 1111 1
Q ss_pred CCCCchHHHhhhccCCCceEEEEeCCHH-HHHHHHhcCCcceeecC
Q 021783 204 PEHPGHELHYSQAKGAGSVLSFLTGSLA-LSKHVVETTKYFSITVS 248 (307)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~ 248 (307)
.....++++.+.+.. ......+.|...||.+.
T Consensus 327 -------------gTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vn 359 (399)
T PF00464_consen 327 -------------GTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVN 359 (399)
T ss_dssp -------------S-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-E
T ss_pred -------------CCCCCeEEEEecccccchHHHHHHHHhcCeeec
Confidence 113457777764321 24555556666667554
No 262
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.70 E-value=1.6e-15 Score=133.54 Aligned_cols=220 Identities=16% Similarity=0.217 Sum_probs=137.2
Q ss_pred EEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccc----cHHHHHHHHHHcCCEEEEeCccC-C---CCcCCccCCCc
Q 021783 41 VVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC----DIRKIAEMAHAHGALLLVDNSIM-S---PVLSRPLELGA 112 (307)
Q Consensus 41 ~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~----~~~~l~~~~~~~~~~li~D~a~~-~---~~~~~~~~~~~ 112 (307)
.+..++.+|++++++.+.+++++|+++.++++.|... .+++|.++|++||+++|+||+|. . |.......++.
T Consensus 160 ~~~~~~~~d~~~l~~~l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv 239 (397)
T TIGR03246 160 GIKHAPYNDLAAAKALISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV 239 (397)
T ss_pred ceEEeCCCCHHHHHHHhccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCC
Confidence 4556788899999999988899999998888888664 39999999999999999999983 2 22112223343
Q ss_pred cEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHH--HHHHHHHHHHHHHHHHHh
Q 021783 113 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLA 190 (307)
Q Consensus 113 d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~ 190 (307)
..-+.+++|.++ .|.++|+++++++ +.+.+............+..+..+.+.++.+. ...++..+..+.+.+.|+
T Consensus 240 ~pDi~t~~K~lg--gG~pigav~~~~~-i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~ 316 (397)
T TIGR03246 240 TPDILTSAKALG--GGFPIGAMLTTTE-IAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLE 316 (397)
T ss_pred CCCEEEeehhhh--CCcceeEEEEcHH-HHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 333447999994 4778999999854 44444322111222234445555555554332 223344444455555554
Q ss_pred cCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC--HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCc
Q 021783 191 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIP 268 (307)
Q Consensus 191 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~ 268 (307)
+... . ++.. ...++.+.++.+.+.+ ......+.+.|.++|+.+...
T Consensus 317 ~l~~--~--~~~~----------~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~------------------ 364 (397)
T TIGR03246 317 KINA--R--YNVF----------SEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIA------------------ 364 (397)
T ss_pred HHHh--c--CCCe----------EeeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEeec------------------
Confidence 3210 0 0100 0113456777777643 234678888888888866431
Q ss_pred HHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 269 VEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 269 ~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+++++|++++. +++++.++.|.+++++
T Consensus 365 ---------g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 365 ---------GPNVVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred ---------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 12459998765 7788888888877764
No 263
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.69 E-value=1.3e-15 Score=141.77 Aligned_cols=118 Identities=19% Similarity=0.271 Sum_probs=98.0
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC---CCceEEEEeCCCCCccccccHHHHHHH
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
.++|+++...|+++. ..+...|++++.++.+ |+++|++.++ +++++|++++|++-.+...++++|+++
T Consensus 591 r~~vLIp~saHgtNp----asa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~i 666 (954)
T PRK12566 591 RDICLIPSSAHGTNP----ASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEV 666 (954)
T ss_pred CCEEEecccccccCH----HHHHHCCCEEEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHH
Confidence 468899999997776 3466689999999884 8999999987 788899999998866555679999999
Q ss_pred HHHcCCEEEEeCccCCCCc--CCccCCCccEEEeccccccccCCCceeEEEEEc
Q 021783 86 AHAHGALLLVDNSIMSPVL--SRPLELGADIVMHSATKFIAGHSDVMAGVLAVK 137 (307)
Q Consensus 86 ~~~~~~~li~D~a~~~~~~--~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~ 137 (307)
||++|+++++|+++..+.. ..+.++|+|++++++||||++|.| +|.....
T Consensus 667 ah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~HKtf~~P~G--~GGP~vG 718 (954)
T PRK12566 667 VHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIPHG--GGGPGMG 718 (954)
T ss_pred HHHcCCEEEEEeeChhhccCCCChhhcCCCEEEecCCcccCcCcc--CCCCccc
Confidence 9999999999999975543 357889999999999999987777 5554444
No 264
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.69 E-value=2.9e-15 Score=134.51 Aligned_cols=176 Identities=19% Similarity=0.184 Sum_probs=122.0
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCc---EEEEecCC-----ChHHHHhhcC----CCceEEEEe--CCCCCccccccH
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGV---VVKRVNTC-----DLDEVASAIG----PWTKLVWVE--SPTNPRQQICDI 79 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~-----d~~~l~~~l~----~~~~~v~~~--~~~n~tG~~~~~ 79 (307)
+..|++++.+|.+.. ++++..|. +++.+|.+ |+++|++.+. .+++.++++ ..++.||.+.|+
T Consensus 209 ~~~v~~S~~~H~S~~----kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl 284 (522)
T TIGR03799 209 GLAILVSERGHYSLG----KAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPL 284 (522)
T ss_pred ceEEEECCCchHHHH----HHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCH
Confidence 467999999998887 55666676 67777764 8899998885 455555554 567789999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCc------cC-CCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH--
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRP------LE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-- 150 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~------~~-~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~-- 150 (307)
++|+++|+++|+++++|+||+.+..... .. .++|.++.|+|||+.+|.| +|+++++++...+.+.....
T Consensus 285 ~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g--~G~llvr~~~~~~~~~~~~~Yl 362 (522)
T TIGR03799 285 DEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMG--AGMVLFKDPALMSAIEHHAEYI 362 (522)
T ss_pred HHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcc--cEEEEEeCHHHHHHhccCcchh
Confidence 9999999999999999999986654322 22 2689999999999989998 99999987655333221000
Q ss_pred ------------hcCCCCCh-hhHHHHhhc--cccHHHHHHHHHHHHHHHHHHHhcCCCc
Q 021783 151 ------------AEGSGLAP-FDCWICLRG--VKTMALRVEKQQDNAQKIAEFLASHPRV 195 (307)
Q Consensus 151 ------------~~~~~~~~-~~~~~~~~~--l~~~~~~~~~~~~~~~~l~~~l~~~~~~ 195 (307)
..++.... ...|..+.. .+.++...++..+.++.+.+.+++.+.+
T Consensus 363 ~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~ 422 (522)
T TIGR03799 363 LRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDF 422 (522)
T ss_pred cCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 11111111 123333322 2345555666677777777777766543
No 265
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.69 E-value=7.3e-15 Score=122.33 Aligned_cols=184 Identities=24% Similarity=0.224 Sum_probs=130.0
Q ss_pred cHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCc--EEEEecCC------ChHHHHhhcC-CCceEEEEeCCCCC
Q 021783 2 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTC------DLDEVASAIG-PWTKLVWVESPTNP 72 (307)
Q Consensus 2 aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~------d~~~l~~~l~-~~~~~v~~~~~~n~ 72 (307)
|+.++++++++|||+|+-.+..|+++..-- .-....|. +.+..+.+ |.|++++... .++|+|+.-....
T Consensus 100 AN~av~~All~pGDtimgm~l~~GGHltHg-~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~SaY- 177 (413)
T COG0112 100 ANQAVYLALLQPGDTIMGLDLSHGGHLTHG-SPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSAY- 177 (413)
T ss_pred HHHHHHHHHcCCCCeEecccCCCCCcccCC-CCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECcccc-
Confidence 567899999999999998777666654211 01122332 34444433 7888888876 6889888754443
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCccC-----CCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSIM-----SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 147 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~~-----~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~ 147 (307)
-...|.+++.++|.+.|+++++|-+|- .|..+++..+ +|++++|+||++.||+ +|+++++++++.+.+..
T Consensus 178 -~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~-AdvVTtTTHKTlrGPr---GG~Il~~~eel~kkin~ 252 (413)
T COG0112 178 -SRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH-ADVVTTTTHKTLRGPR---GGIILTNDEELAKKINS 252 (413)
T ss_pred -ccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc-cceEeCCcccCCCCCC---ceEEEeccHHHHHHhhh
Confidence 377899999999999999999999994 5667788886 9999999999998886 79999998777666654
Q ss_pred HHHhc--CC-CCChh---hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcC
Q 021783 148 LQNAE--GS-GLAPF---DCWICLRGVKTMALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 148 ~~~~~--~~-~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
.--.. +. .+... ...+..+.-..++...++..+|++.|.+.|..+
T Consensus 253 aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~ 303 (413)
T COG0112 253 AVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER 303 (413)
T ss_pred hcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc
Confidence 32111 11 11111 111222223456778888999999999999875
No 266
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.69 E-value=1.3e-15 Score=142.51 Aligned_cols=172 Identities=21% Similarity=0.227 Sum_probs=125.8
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC---CCceEEEEeCCCCCcccccc-HHHHH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG---PWTKLVWVESPTNPRQQICD-IRKIA 83 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~-~~~l~ 83 (307)
..++|+++...|++.. ..++..|++++.++.+ |+++|++.++ +++++|++++|+| +|.+.+ +++|.
T Consensus 577 ~R~~vlip~saHgtnP----asa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~ 651 (939)
T TIGR00461 577 HRNICLIPVSAHGTNP----ASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHAC 651 (939)
T ss_pred CCCEEEEEccccCcCH----HHHHHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHH
Confidence 3568999999998776 5577889999999974 8999999997 4899999999999 799877 99999
Q ss_pred HHHHHcCCEEEEeCccCCCC--cCCccCCCccEEEeccccccc-----cCCCceeEEEEEcChhHHHHHHHH---H----
Q 021783 84 EMAHAHGALLLVDNSIMSPV--LSRPLELGADIVMHSATKFIA-----GHSDVMAGVLAVKGERLAKELYFL---Q---- 149 (307)
Q Consensus 84 ~~~~~~~~~li~D~a~~~~~--~~~~~~~~~d~~~~s~~K~~~-----g~~g~~~G~~~~~~~~~~~~~~~~---~---- 149 (307)
++||++|.++++|+++..+. ...+.++|+|++++|.||+|+ |++| .|++.+++... ..+... .
T Consensus 652 ~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg--~G~i~vr~~L~-~~lPg~~v~~t~d~ 728 (939)
T TIGR00461 652 DIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPG--MGPIGVKSHLI-PFLPKHDVVSMITG 728 (939)
T ss_pred HHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCC--eEEEEEhhhch-hhcCCCcccccccC
Confidence 99999999999999996533 347788999999999999887 5555 79999996422 221100 0
Q ss_pred ---Hh-cC---C-CCCh----hhHH--HHhhccccHHHHHHHHHHHHHHHHHHHhcC
Q 021783 150 ---NA-EG---S-GLAP----FDCW--ICLRGVKTMALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 150 ---~~-~~---~-~~~~----~~~~--~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
.. .+ + .... ...| +...|-+.+++..+....+++++.++|+..
T Consensus 729 ~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~ 785 (939)
T TIGR00461 729 IGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH 785 (939)
T ss_pred CCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 00 00 0 0001 2222 333344556665666677888888888754
No 267
>PLN02590 probable tyrosine decarboxylase
Probab=99.68 E-value=4e-15 Score=133.53 Aligned_cols=174 Identities=16% Similarity=0.202 Sum_probs=123.1
Q ss_pred eEEEcCCCCcchHHHHhhhcccCCc---EEEEecCC-------ChHHHHhhcCC------CceEEEEeCCCCCccccccH
Q 021783 16 EIVAGDDLYGGTDRLLSRVTPKTGV---VVKRVNTC-------DLDEVASAIGP------WTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 16 ~Vlv~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~~ 79 (307)
.|.+++..|.+.. ++++..|+ +++.||.+ |+++|+++|.. .+-+|+.+..+..+|.+-|+
T Consensus 231 vvy~S~~aH~Sv~----KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl 306 (539)
T PLN02590 231 VVYGSDQTHSSFR----KACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPL 306 (539)
T ss_pred EEEecCCchHHHH----HHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCH
Confidence 5667888998877 66777776 46666653 78999999852 35677777888899999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCcc------C-CCccEEEeccccccccCCCceeEEEEEcChhH-HHHHHH---H
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPL------E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELYF---L 148 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~------~-~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~-~~~~~~---~ 148 (307)
++|.++|++||+|++||+||+......+. . ..+|.++.++|||+..|.+ +|+++++++.. .+.+.. +
T Consensus 307 ~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~--cg~llvr~~~~l~~a~~~~~~Y 384 (539)
T PLN02590 307 VPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQT--CSPLWVKDRYSLIDALKTNPEY 384 (539)
T ss_pred HHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcC--EEEEEecCHHHHHHHhhcCHHH
Confidence 99999999999999999999865432211 1 1479999999999988888 99999997632 222111 1
Q ss_pred HHh-----------------cCCCCChhhHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcCCCc
Q 021783 149 QNA-----------------EGSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRV 195 (307)
Q Consensus 149 ~~~-----------------~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~~~ 195 (307)
... .+-.......|+.+. |.+.+....++..+.++.+.+.+++.+.+
T Consensus 385 L~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~f 450 (539)
T PLN02590 385 LEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSF 450 (539)
T ss_pred hCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 100 001122344454443 35677788888888888888888877643
No 268
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.68 E-value=2.7e-15 Score=119.86 Aligned_cols=250 Identities=20% Similarity=0.252 Sum_probs=166.9
Q ss_pred CcHHHHHHH-hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC--------CCceEEEE
Q 021783 1 MAALAAVTH-LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG--------PWTKLVWV 66 (307)
Q Consensus 1 ~aal~~~~~-~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~--------~~~~~v~~ 66 (307)
|.++.+++. +-++|.+|++.+.+|--.+.. ..+....|+.++.+... |++++++++. +.|++|.+
T Consensus 82 mgNllaIm~Hc~~rg~eii~gd~~HI~~~E~-gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIcl 160 (384)
T KOG1368|consen 82 MGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQ-GGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICL 160 (384)
T ss_pred cccHHHHHHHhcCCCceEEeccchheeehhc-cChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEe
Confidence 567777777 456999999999988544422 24456678888887652 8999999987 45899999
Q ss_pred eCCCCCcc-cccc---HHHHHHHHHHcCCEEEEeCccC------CCCcCCccCCCccEEEeccccccccCCCceeEEEEE
Q 021783 67 ESPTNPRQ-QICD---IRKIAEMAHAHGALLLVDNSIM------SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAV 136 (307)
Q Consensus 67 ~~~~n~tG-~~~~---~~~l~~~~~~~~~~li~D~a~~------~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~ 136 (307)
++.+|.+| .++| +.++.++|++||+.++.|+|-- .|..-.-.....|.+.-.+||.++.|- +.++++
T Consensus 161 ENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPV---GSViVG 237 (384)
T KOG1368|consen 161 ENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPV---GSVIVG 237 (384)
T ss_pred eccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCc---ccEEEc
Confidence 98877777 7777 6688899999999999999952 222111112247888889999997663 345555
Q ss_pred cChhHHHHHHHHHHhcC--CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhh
Q 021783 137 KGERLAKELYFLQNAEG--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 137 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 214 (307)
+++ ......+.....| ...+...+..++-++..-...++.-++.++.+.+++...+.+ .+..+..
T Consensus 238 ~k~-FI~kA~~~RKalGGGmRQsGvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~~~~i-~v~v~a~----------- 304 (384)
T KOG1368|consen 238 SKD-FIDKARHFRKALGGGMRQSGVLAAAALVALDENVPLLRADHKRAKELAEYINTPEEI-RVEVPAV----------- 304 (384)
T ss_pred cHH-HHHHHHHHHHHhcCchhHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhccccce-eeecchh-----------
Confidence 555 4444444443333 345555666666666655556677788888899888755433 1222211
Q ss_pred hccCCCceEEEEe-CCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----C
Q 021783 215 QAKGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----E 289 (307)
Q Consensus 215 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~ 289 (307)
..+++.+.+ .+.-.++.+.+.++.+||..-.|..+ .+||.+.. +
T Consensus 305 ----etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~s~---------------------------r~Rivlh~Qvt~~ 353 (384)
T KOG1368|consen 305 ----ETNIVNMVLCQARLTAEELCKFLEKNGILLMGGASR---------------------------RIRIVLHHQVTDE 353 (384)
T ss_pred ----hcceeeeecccccCCHHHHHHHHHHCCeEEeecccc---------------------------ceEEEEEEecCHH
Confidence 234555444 22234888999999999977665542 28999976 5
Q ss_pred ChHHHHHHH
Q 021783 290 DVNDLISDL 298 (307)
Q Consensus 290 ~~~~~i~~l 298 (307)
+.+..+..|
T Consensus 354 ~ve~~~~~~ 362 (384)
T KOG1368|consen 354 DVEYVKSVL 362 (384)
T ss_pred HHHHHHHHH
Confidence 555555555
No 269
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.68 E-value=2.4e-15 Score=143.00 Aligned_cols=128 Identities=24% Similarity=0.296 Sum_probs=103.5
Q ss_pred HHHHHh-cCC--CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 021783 5 AAVTHL-LGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 5 ~~~~~~-~~~--gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
++++++ .++ +|+|++++.+|+++...|...++..|++++.++..+ ++. ..++..+++++|+ .+|.+.|+++
T Consensus 153 a~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~--d~~---~~~~~~vlvq~p~-~~G~i~d~~~ 226 (954)
T PRK05367 153 AMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK--ALD---HDDVFGVLLQYPG-TSGEVRDYTA 226 (954)
T ss_pred HHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--CCC---cccEEEEEEecCC-CCeeeccHHH
Confidence 344443 344 499999999999999999988999999999999753 111 3456666666764 5899999999
Q ss_pred HHHHHHHcCCEEEEeCcc-CCCCcCCccCCCccEEEeccccc-----cccCCCceeEEEEEcChhH
Q 021783 82 IAEMAHAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATKF-----IAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~-~~~~~~~~~~~~~d~~~~s~~K~-----~~g~~g~~~G~~~~~~~~~ 141 (307)
|.++||++|+++++|..+ +.+....+.++|+|++++|.||| ++|| + .|+++++++..
T Consensus 227 i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP-~--aGflavr~~~~ 289 (954)
T PRK05367 227 LIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGGP-H--AAYFAVRDAYK 289 (954)
T ss_pred HHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCCC-C--EEEEEECHHHH
Confidence 999999999999999988 44555588999999999999999 7776 5 99999997643
No 270
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.68 E-value=3.7e-16 Score=124.57 Aligned_cols=252 Identities=18% Similarity=0.210 Sum_probs=155.2
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChH-HHHhhcCCCceEEEEeCCCCCccccccHHHH
Q 021783 4 LAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLD-EVASAIGPWTKLVWVESPTNPRQQICDIRKI 82 (307)
Q Consensus 4 l~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~-~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l 82 (307)
.+++-+++.|.|-|+.....|.+....+ .+++ +...+++-|++ .+.++.+-+-++|..+...++.|.+.|+++|
T Consensus 141 ag~feail~pedAvfSDeLNhASIIdGi-rLck----ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei 215 (417)
T KOG1359|consen 141 AGAFEAILTPEDAVFSDELNHASIIDGI-RLCK----RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEI 215 (417)
T ss_pred hHHHHHhcChhhhhhccccccchhhhhh-HHHh----hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHH
Confidence 3556667888888888888887776333 2333 22233333443 2334444577888888999999999999999
Q ss_pred HHHHHHcCCEEEEeCccCCCCcC-Ccc--------CCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh--
Q 021783 83 AEMAHAHGALLLVDNSIMSPVLS-RPL--------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-- 151 (307)
Q Consensus 83 ~~~~~~~~~~li~D~a~~~~~~~-~~~--------~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~-- 151 (307)
.+++++||.++++|++|+.|.+. ... .-.+|++.++++|.++|.. +|+..++++ +...++...+.
T Consensus 216 ~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~---GGyttgp~~-li~llrqr~Rpyl 291 (417)
T KOG1359|consen 216 SQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGAS---GGYTTGPKP-LISLLRQRSRPYL 291 (417)
T ss_pred HHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCC---CCCccCChh-HHHHHHhcCCcee
Confidence 99999999999999999976653 111 1247999999999997665 799999876 43444333222
Q ss_pred cCCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC
Q 021783 152 EGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 228 (307)
Q Consensus 152 ~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (307)
...++++...-....++.. -..-.+..+.+.++.++..+.. .+...+ ...++..+.+.
T Consensus 292 FSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~a----GftIsg---------------~~hPI~pv~lG 352 (417)
T KOG1359|consen 292 FSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAA----GFTISG---------------ASHPICPVMLG 352 (417)
T ss_pred ecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc----CceecC---------------CCCCccceecc
Confidence 2223333221111111111 1222344455666666665533 221211 12356677778
Q ss_pred CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 229 SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 229 ~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
+...+.+..+++...||.|-. .++|..+.. .-.+|+.++..+.++.++.+.+++.
T Consensus 353 da~lA~~~ad~lLk~Gi~Vig------fs~PvVP~g--------------kariRVqiSAaHt~edid~~i~Af~ 407 (417)
T KOG1359|consen 353 DARLASKMADELLKRGIYVIG------FSYPVVPKG--------------KARIRVQISAAHTEEDIDRLIEAFS 407 (417)
T ss_pred cHHHHHHHHHHHHhcCceEEe------ecCCcCCCC--------------ceEEEEEEehhcCHHHHHHHHHHHH
Confidence 877788888888888987754 223333222 2348888887555555555555443
No 271
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.67 E-value=8.4e-16 Score=132.58 Aligned_cols=178 Identities=22% Similarity=0.303 Sum_probs=121.1
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----------Ch-----HHHHhhcC--CCceE---
Q 021783 4 LAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----------DL-----DEVASAIG--PWTKL--- 63 (307)
Q Consensus 4 l~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----------d~-----~~l~~~l~--~~~~~--- 63 (307)
.++++++++|||+|+++..+|-+.. ..+...|+++++++.. ++ ++++++++ +..+.
T Consensus 96 ~a~i~a~~~~gd~VLv~RN~HkSv~----~alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~ 171 (417)
T PF01276_consen 96 QAMIMALCRPGDKVLVDRNCHKSVY----NALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRL 171 (417)
T ss_dssp HHHHHHHTTTTCEEEEETT--HHHH----HHHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESE
T ss_pred HHHHHHhcCCCCEEEEcCCcHHHHH----HHHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceE
Confidence 4788899999999999999999998 6677889999999862 44 88888886 44444
Q ss_pred EEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCC----cC-CccCCCcc-------EEEeccccccccCCCcee
Q 021783 64 VWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV----LS-RPLELGAD-------IVMHSATKFIAGHSDVMA 131 (307)
Q Consensus 64 v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~----~~-~~~~~~~d-------~~~~s~~K~~~g~~g~~~ 131 (307)
+++++|+. .|.+.|+++|+++|++++++|++|+||+.-. ++ .....|+| +++.|+||.+.+.+- .
T Consensus 172 vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQ--t 248 (417)
T PF01276_consen 172 VVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALALGADRPNDPGIIVVQSTHKTLPALTQ--T 248 (417)
T ss_dssp EEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT---
T ss_pred EEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhhccCccccccceeeeechhhccccccc--c
Confidence 99999987 6999999999999999999999999997421 12 45567889 999999999987765 8
Q ss_pred EEEEEcChh-H-HHHHHHHHHhcCCCCChhhHHHHhhccc----c-----HHHHHHHHHHHHHHHHHHHhc
Q 021783 132 GVLAVKGER-L-AKELYFLQNAEGSGLAPFDCWICLRGVK----T-----MALRVEKQQDNAQKIAEFLAS 191 (307)
Q Consensus 132 G~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~-----~~~~~~~~~~~~~~l~~~l~~ 191 (307)
+++..+.+. + .+.+........++.+ .+..++.++ . -+..+++..+.++.+++.+++
T Consensus 249 s~lh~~~~~~v~~~~~~~~l~~~~TTSP---SY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~ 316 (417)
T PF01276_consen 249 SMLHVKGDRIVDHERVNEALSMHQTTSP---SYPLMASLDVARAQMEEEEGRELLEEAIELAEEFRKKINR 316 (417)
T ss_dssp EEEEEETCCCTTHHHHHHHHHHHS-SS-----HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecCCCcccHHHHHHHHHHHcCCCh---HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 999998774 3 3444443333322211 122222211 1 123455666677777777743
No 272
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.66 E-value=8.3e-15 Score=129.43 Aligned_cols=247 Identities=15% Similarity=0.194 Sum_probs=147.2
Q ss_pred CCCeEEEcCCCCcchHHHHhhhccc------CC---cEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccc-----c
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPK------TG---VVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC-----D 78 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~------~g---~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~-----~ 78 (307)
.+.+|+..+..|.+........... ++ ..+..++.+|++++++.+.+++++|+++ |.+++|-+. .
T Consensus 127 ~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aaviiE-Pv~~~gg~~~~~~~~ 205 (406)
T PRK12381 127 HKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIVE-PIQGEGGVIPADKAF 205 (406)
T ss_pred CCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEEEe-CCcCCCCCcCCCHHH
Confidence 4567888787777665321111110 00 1245567789999999998889999987 556666532 3
Q ss_pred HHHHHHHHHHcCCEEEEeCccC-CCCcCCc---cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCC
Q 021783 79 IRKIAEMAHAHGALLLVDNSIM-SPVLSRP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 154 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~-~~~~~~~---~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~ 154 (307)
+++|.++|++||+++|+||+|. .+..... ..++.+.-+.|++|.++ +|.++|+++++++ +.+.+.........
T Consensus 206 l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK~l~--gG~~ig~~~~~~~-~~~~~~~~~~~~t~ 282 (406)
T PRK12381 206 LQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKALG--GGFPIGAMLTTEK-CASVMTVGTHGTTY 282 (406)
T ss_pred HHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehhhhh--CCCceEEEEEcHH-HHhhcCCCCCCCCC
Confidence 9999999999999999999984 2221111 12233222468999995 4788999999855 44444322222222
Q ss_pred CCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH--
Q 021783 155 GLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-- 230 (307)
Q Consensus 155 ~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 230 (307)
..++..+..+.+.++.+.. ..++..+..+.+.+.|++... . ++.. ...++.|.++++.+.+.
T Consensus 283 ~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~--~--~~~~----------~~vrg~Gl~~~~~l~~~~~ 348 (406)
T PRK12381 283 GGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINA--R--YGLF----------SEIRGLGLLIGCVLNAEYA 348 (406)
T ss_pred CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh--h--CCCE----------EEEecCeEEEEEEecCchh
Confidence 3455555555555543321 233334444444444443210 0 0000 11244577888877542
Q ss_pred HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 231 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 231 ~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
.....+.+.+.++||.+.... ++.+|++++. +++++.++.|.+++++
T Consensus 349 ~~~~~~~~~l~~~Gv~v~~~g---------------------------~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 399 (406)
T PRK12381 349 GKAKQISQEAAKAGVMVLIAG---------------------------PNVVRFAPALNISEEEITTGLDRFARACER 399 (406)
T ss_pred hHHHHHHHHHHHCCcEEeeCC---------------------------CCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 246778888888898774311 2359999875 6777777888777754
No 273
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.65 E-value=2.6e-15 Score=132.51 Aligned_cols=172 Identities=23% Similarity=0.221 Sum_probs=129.5
Q ss_pred eEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceE--EEEeCCCCCccccccHHHHHHHHH
Q 021783 16 EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKL--VWVESPTNPRQQICDIRKIAEMAH 87 (307)
Q Consensus 16 ~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~--v~~~~~~n~tG~~~~~~~l~~~~~ 87 (307)
+|++|...|++.. +++...|+..+.++.+ |+++++++++.++.. |+.+..++++|.+-|+++|.++|+
T Consensus 159 ~ii~s~~aH~s~~----Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~ 234 (460)
T COG0076 159 NIVCSETAHFSFE----KAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAE 234 (460)
T ss_pred eEEecCcchhHHH----HHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHH
Confidence 6999999998888 7788888887777763 899999999977666 888889999999999999999999
Q ss_pred HcCCEEEEeCccCCCCcC--C------ccCCCccEEEeccccccccCCCceeEEEEEcCh-hHHHHHHHHHHhcC-----
Q 021783 88 AHGALLLVDNSIMSPVLS--R------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-RLAKELYFLQNAEG----- 153 (307)
Q Consensus 88 ~~~~~li~D~a~~~~~~~--~------~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~-~~~~~~~~~~~~~~----- 153 (307)
++++++|+|+|++....+ . ..-.++|.++.|+||++..|.| +|+++.+++ .+.+.........+
T Consensus 235 ~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~--~G~il~rd~e~l~~~~~~~~~yl~~~~~~ 312 (460)
T COG0076 235 EYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIG--CGVVLFRDEEALRRILIFADYYLPGGGIP 312 (460)
T ss_pred HcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCC--ceEEEEECHHHhhhhhhcccccCCCCCcC
Confidence 999999999999865442 1 1112689999999999999998 999999988 34444332222211
Q ss_pred ------CCCC--hhhHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcCC
Q 021783 154 ------SGLA--PFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHP 193 (307)
Q Consensus 154 ------~~~~--~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~ 193 (307)
+.+. ...+|..+. +.+.+....++..++++.+.+.+++.+
T Consensus 313 ~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~ 362 (460)
T COG0076 313 NFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLG 362 (460)
T ss_pred ceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1111 233444333 346677777777888888888888764
No 274
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.65 E-value=1.4e-14 Score=137.33 Aligned_cols=127 Identities=23% Similarity=0.222 Sum_probs=99.2
Q ss_pred HHHHHh-cCC--CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 021783 5 AAVTHL-LGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 5 ~~~~~~-~~~--gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
+++++. +++ +|+|++++..|+++...|...++..|++++.+|..+.+ .....+..+++..|++ +|.+.|+++
T Consensus 180 a~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~----~~~~~v~~vlvq~P~~-~G~v~dv~~ 254 (993)
T PLN02414 180 AMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD----YSSGDVCGVLVQYPAT-DGEVLDYAE 254 (993)
T ss_pred HHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc----cccCceEEEEEecCCC-CeEEcCHHH
Confidence 344443 454 48899999999999999999999999999999875422 1233455555555554 899999999
Q ss_pred HHHHHHHcCCEEEEeCccCCCCc--CCccCCCccEEEecccccc-----ccCCCceeEEEEEcChh
Q 021783 82 IAEMAHAHGALLLVDNSIMSPVL--SRPLELGADIVMHSATKFI-----AGHSDVMAGVLAVKGER 140 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~~~~~~--~~~~~~~~d~~~~s~~K~~-----~g~~g~~~G~~~~~~~~ 140 (307)
|.++||++|+++++ +++..+.. ..+.++|+|+++++.+||. +||. .|+++++++.
T Consensus 255 I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~---aGflavr~~~ 316 (993)
T PLN02414 255 FVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPH---AAFLATSQEY 316 (993)
T ss_pred HHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCC---eeEEEECHHH
Confidence 99999999999999 77765443 3688999999999999997 5543 7999999764
No 275
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.65 E-value=1.4e-14 Score=126.87 Aligned_cols=244 Identities=16% Similarity=0.158 Sum_probs=140.4
Q ss_pred CCCCeEEEcCCCCcch-HHHHhh-----hcccCCc---EEEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc----
Q 021783 12 GTGEEIVAGDDLYGGT-DRLLSR-----VTPKTGV---VVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD---- 78 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~-~~~~~~-----~~~~~g~---~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---- 78 (307)
..+++|++.+..|.+. ...+.. ..+.++. .+...+.+|++++++.+++++++|++++++|++|...+
T Consensus 108 ~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~~~~~~~ 187 (375)
T PRK04260 108 TGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLELVQGESGVLPADKDF 187 (375)
T ss_pred cCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCCCeEEEEECCeECCCCCcCCCHHH
Confidence 4567888877776543 222110 0111111 12233456899999998888899999999999998865
Q ss_pred HHHHHHHHHHcCCEEEEeCccCC-CCcCCc---cCC--CccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhc
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMS-PVLSRP---LEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 152 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~-~~~~~~---~~~--~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~ 152 (307)
++++.++|+++|+++|+|++|.. +..... ..+ ..| +.||||.++ +|+++|+++++++ +.+.+.......
T Consensus 188 l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd--i~t~sK~l~--~G~~ig~~~~~~~-~~~~~~~~~~~~ 262 (375)
T PRK04260 188 VKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD--IFTLAKGLA--NGVPVGAMLAKSS-LGGAFGYGSHGS 262 (375)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC--EEEeccccc--CCcceEEEEEcHH-HHhhcCCCCCCC
Confidence 89999999999999999999852 111111 122 245 458999994 3678999999855 433332211112
Q ss_pred CCCCChhhHHHHhhccccHH--HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH
Q 021783 153 GSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 230 (307)
Q Consensus 153 ~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (307)
....++..+..+.+.++.+. ...++..+..+.+.+.+.+... . .+.+. ..++.+.++++.+..
T Consensus 263 t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~--~~~~~----------~~~~~g~~~~~~~~~- 327 (375)
T PRK04260 263 TFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQ--D--KETVT----------TVRGLGYMIGIETTA- 327 (375)
T ss_pred CCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh--h--CCCee----------EEeccceEEEEEecC-
Confidence 22234455555555554332 2223333333444444432100 0 00000 012357788888732
Q ss_pred HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 231 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 231 ~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
....+.+.+.++||.+.++. .+.+|++++....++.++.+.+.++
T Consensus 328 -~~~~~~~~l~~~Gi~v~~~~---------------------------~~~lR~~~~~~~t~~~i~~~l~~l~ 372 (375)
T PRK04260 328 -DLSQLVEAARDKGLIVLTAG---------------------------TNVIRLLPPLTLTKEEIEQGIAILS 372 (375)
T ss_pred -cHHHHHHHHHhCCCEEecCC---------------------------CCEEEEcCCCccCHHHHHHHHHHHH
Confidence 35678888888898775321 2459999976444444444444443
No 276
>PLN00144 acetylornithine transaminase
Probab=99.63 E-value=6.4e-15 Score=128.83 Aligned_cols=221 Identities=16% Similarity=0.177 Sum_probs=136.3
Q ss_pred EEEecCCChHHHHhhcC-CCceEEEEeCCCCCccccc--c--HHHHHHHHHHcCCEEEEeCccCC-CCcC---CccCCCc
Q 021783 42 VKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQIC--D--IRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLELGA 112 (307)
Q Consensus 42 ~~~v~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~--~--~~~l~~~~~~~~~~li~D~a~~~-~~~~---~~~~~~~ 112 (307)
+..+|.+|++.+++.+. .++++|+++..+||.|... . +++|.++|++||+++|+||+|.. +... ....++.
T Consensus 148 ~~~~~~~d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~ 227 (382)
T PLN00144 148 VTFVEYGNLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGV 227 (382)
T ss_pred eEEeCCCCHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCC
Confidence 45667779999999886 5788999998899855554 2 89999999999999999999862 2211 1112233
Q ss_pred cEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcC
Q 021783 113 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 113 d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
+--+.+++|.++ +|+++|+++++++ +.+.+...........++..+..+.+.++.++. ..+.++++.+.+.+.+.
T Consensus 228 ~PDi~t~sK~l~--~G~pig~v~~~~~-~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~ 302 (382)
T PLN00144 228 EPDIMTLAKPLA--GGLPIGAVLVTEK-VASAINPGDHGSTFAGGPLVCNAALAVLDKISK--PGFLASVAKKGEYLREL 302 (382)
T ss_pred CCCEEEeccccc--CCcceEEEEEcHH-HHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHH
Confidence 333788999995 3688999999855 444333222222334455556666655544422 23333444443333211
Q ss_pred CCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHH
Q 021783 193 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVR 272 (307)
Q Consensus 193 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~ 272 (307)
- ...+..+|.+. ..++.|.++++.+.. ....+.+.+..+|+.+.++..
T Consensus 303 l------~~~~~~~~~~~----~vrg~G~~~~l~l~~--~~~~~~~~~~~~Gv~i~~~~~-------------------- 350 (382)
T PLN00144 303 L------RRKLGGNPHVK----EVRGVGLLVGIQLDV--PAGPLVDACRDSGLLVLTAGK-------------------- 350 (382)
T ss_pred H------HHHHhhCCCce----eeecCceEEEEEecC--ccHHHHHHHHHCCeEEeecCC--------------------
Confidence 0 00001111100 113467888888832 256777888888997765321
Q ss_pred HhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 273 QARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 273 ~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
.+.+|++++. +++++.++.|.+++.++
T Consensus 351 ------~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 351 ------GDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred ------CCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 2459999986 67777888888887654
No 277
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.63 E-value=3.2e-14 Score=115.30 Aligned_cols=252 Identities=17% Similarity=0.189 Sum_probs=160.8
Q ss_pred CCCCeEEEcCC-CCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcC
Q 021783 12 GTGEEIVAGDD-LYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG 90 (307)
Q Consensus 12 ~~gd~Vlv~~~-~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~ 90 (307)
++|++|++++- +|++-..+.+..+...+......-.+++++++++++.++.+|++++++.-||...|+.+|-.++|++|
T Consensus 117 ~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~g 196 (407)
T COG3844 117 QEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHG 196 (407)
T ss_pred CCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcC
Confidence 56888887766 45444444445555544332221224788999999999999999999999999999999999999999
Q ss_pred CEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH---------------------
Q 021783 91 ALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--------------------- 148 (307)
Q Consensus 91 ~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~--------------------- 148 (307)
++++.|=+|+.|..+ +...+|+|+-+++.+|++.|.+|-.+|..+.+ +-.+......
T Consensus 197 alv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~-~h~e~~~~~lsgW~gha~pf~m~~~y~p~~g 275 (407)
T COG3844 197 ALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAP-RHRERSWPPLSGWWGHARPFAMEEVYAPGPG 275 (407)
T ss_pred ceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCCceeEEecc-ccccccccccccccCCCCcchhhhccCcCcc
Confidence 999999999999988 77788999999999999988777655554443 3222111111
Q ss_pred -HHhcCCCCChhhHHHHhhccccHHH-HHHHHHHHHHHH----HHHHhcCCCccEEecCCCCCCCchHHH-hhhccCCCc
Q 021783 149 -QNAEGSGLAPFDCWICLRGVKTMAL-RVEKQQDNAQKI----AEFLASHPRVKKVNYAGLPEHPGHELH-YSQAKGAGS 221 (307)
Q Consensus 149 -~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~l----~~~l~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~ 221 (307)
.++..++.+.........+|+-+.. .+.++.+..-.| .+.++.+... + ++++. .+....+|+
T Consensus 276 a~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~----~-------~l~l~tPr~~~~rGs 344 (407)
T COG3844 276 ARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEY----Y-------GLTLVTPRAHEERGS 344 (407)
T ss_pred ccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhcccc----C-------CcEEeccchhhhccc
Confidence 1111222333344444444443311 133333333333 3334333210 0 11111 111234678
Q ss_pred eEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec-----cCChHHHHH
Q 021783 222 VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-----IEDVNDLIS 296 (307)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~-----~~~~~~~i~ 296 (307)
-+++..+ ++..++++|..+|+-..+. .++-+|+.+. ..|+=..++
T Consensus 345 qvS~~hp---~~~~V~qaLi~rGVigD~R---------------------------~P~vlRfgftPlY~~~~DVw~AV~ 394 (407)
T COG3844 345 QVSLYHP---HGYQVMQALIDRGVIGDFR---------------------------EPDVLRFGFTPLYVSFVDVWDAVD 394 (407)
T ss_pred eeeEecC---cHHHHHHHHHHcCcccccc---------------------------CCCeeeecCccceechhHHHHHHH
Confidence 8888877 3667888888888843321 1344888884 478889999
Q ss_pred HHHHHHhcC
Q 021783 297 DLDKALRTG 305 (307)
Q Consensus 297 ~l~~~l~~~ 305 (307)
.|.++|++.
T Consensus 395 ~L~evL~t~ 403 (407)
T COG3844 395 ALEEVLDTL 403 (407)
T ss_pred HHHHHHHhh
Confidence 999998764
No 278
>PLN02624 ornithine-delta-aminotransferase
Probab=99.62 E-value=1.2e-14 Score=130.31 Aligned_cols=218 Identities=12% Similarity=0.162 Sum_probs=131.8
Q ss_pred EEEecCCChHHHHhhcC---CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc---CCc--c
Q 021783 42 VKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL---SRP--L 108 (307)
Q Consensus 42 ~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~--~ 108 (307)
+..++.+|++.+++.++ +++++|+++.++|++|.+.+ +++|.++|++||+++|+||+|. .|.. ... .
T Consensus 203 ~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~ 282 (474)
T PLN02624 203 HLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWE 282 (474)
T ss_pred ceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhc
Confidence 44567778999998885 57889999999999999987 9999999999999999999996 2211 111 1
Q ss_pred CCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHH
Q 021783 109 ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIA 186 (307)
Q Consensus 109 ~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~ 186 (307)
....|+++ ++|.++ .++.++|+++.+++ +...+............+..+..+.+.++.+.. ..++..+..+.+.
T Consensus 283 ~i~pDiv~--lsK~lg-gG~~pigav~~~~~-i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~ 358 (474)
T PLN02624 283 EVRPDVVI--LGKALG-GGVIPVSAVLADKD-VMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEKLAERSAKLGQELR 358 (474)
T ss_pred CCCCCEEE--eccccc-CCCCcceeeeecHH-HHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 22345555 689995 34467899888754 333332211112223445566666666654432 1112222223333
Q ss_pred HHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC----HHHHHHHHhcCCcceeecCCCCccceeeccccc
Q 021783 187 EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS----LALSKHVVETTKYFSITVSFGSVKSLISMPCFM 262 (307)
Q Consensus 187 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~ 262 (307)
+.+++.. ..+ +.. ....++.+.++.+.++. .+.+..+.+.|.++||.+.++.
T Consensus 359 ~~L~~l~-------~~~---~~~---i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~----------- 414 (474)
T PLN02624 359 DQLQKIQ-------KQF---PKL---IKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPTH----------- 414 (474)
T ss_pred HHHHHHH-------HhC---CCc---eEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEecCC-----------
Confidence 3333210 000 000 00113356677776643 2346778888888899775422
Q ss_pred CCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 021783 263 SHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 303 (307)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 303 (307)
.+++||++.+ +++++.++.|.++++
T Consensus 415 ----------------~~~lR~~p~l~~t~e~id~~l~~L~~~l~ 443 (474)
T PLN02624 415 ----------------DTIIRLAPPLSISEDELQECSKALSDVLE 443 (474)
T ss_pred ----------------CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 3459998754 677777777777764
No 279
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.61 E-value=2e-14 Score=127.90 Aligned_cols=245 Identities=14% Similarity=0.129 Sum_probs=143.7
Q ss_pred CCCeEEEcCCCCcchHHHHhhh----------------cccCCcEEEEecCCChHHHHhhcC---CCceEEEEeCCCCCc
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRV----------------TPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPR 73 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~----------------~~~~g~~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~t 73 (307)
.+++|+...++|.+........ ....+..+..++.+|++++++.+. +++++|+++...+.+
T Consensus 129 gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~~ 208 (423)
T TIGR00713 129 GRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGNM 208 (423)
T ss_pred CCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCCC
Confidence 4689999999888864211110 001112345566678999999886 578899998444447
Q ss_pred ccccc----HHHHHHHHHHcCCEEEEeCccCCCCc---CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH
Q 021783 74 QQICD----IRKIAEMAHAHGALLLVDNSIMSPVL---SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 146 (307)
Q Consensus 74 G~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~---~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~ 146 (307)
|.+.+ +++|.++|++||+++|+||+|..... .....++.+--+.+++|.++ +|+++|+++++++ +.+.+.
T Consensus 209 G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pDi~t~sK~l~--~G~pig~v~~~~~-i~~~~~ 285 (423)
T TIGR00713 209 GVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPDLTTLGKIIG--GGLPVGAFGGRRE-IMERLA 285 (423)
T ss_pred CCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcchhhhhhhhc--CCCceeeeeEHHH-HHHhhC
Confidence 98876 79999999999999999999953221 11111232222447999994 5788999999855 444443
Q ss_pred HH---HHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHh----cCCCccEEecCCCCCCCchHHHhhhcc
Q 021783 147 FL---QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAK 217 (307)
Q Consensus 147 ~~---~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~----~~~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (307)
.. ........++..+..+.+.++.+.. ..+...+..+.+.+.+. +++.+. ..+
T Consensus 286 ~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------------------~v~ 347 (423)
T TIGR00713 286 PEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPH------------------TVN 347 (423)
T ss_pred cCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCe------------------EEE
Confidence 21 1112224455666666666554332 22333333333333333 221110 012
Q ss_pred CCCceEEEEeCC-------------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEE
Q 021783 218 GAGSVLSFLTGS-------------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRI 284 (307)
Q Consensus 218 ~~~~~~~~~~~~-------------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRi 284 (307)
+.+.++.+.+.. ......+.+.+.++|+.+..+.. +.+|+
T Consensus 348 ~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------------~~~~l 400 (423)
T TIGR00713 348 RVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQF---------------------------EACFL 400 (423)
T ss_pred eeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCCc---------------------------cceee
Confidence 245666665531 12244677777778887653221 12677
Q ss_pred Eecc--CChHHHHHHHHHHHhcC
Q 021783 285 SVGI--EDVNDLISDLDKALRTG 305 (307)
Q Consensus 285 s~~~--~~~~~~i~~l~~~l~~~ 305 (307)
++.. +++++.++.|.++++++
T Consensus 401 ~~~~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 401 SAAHTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred ECCCCHHHHHHHHHHHHHHHhhC
Confidence 7743 78888899998888653
No 280
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.61 E-value=1.7e-13 Score=113.46 Aligned_cols=253 Identities=18% Similarity=0.182 Sum_probs=148.9
Q ss_pred CcHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccC--CcEEEEecC----CChHHHHhhcC------CCceEEEEeC
Q 021783 1 MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNT----CDLDEVASAIG------PWTKLVWVES 68 (307)
Q Consensus 1 ~aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~----~d~~~l~~~l~------~~~~~v~~~~ 68 (307)
||+..++.+.++||+.|++..-.|...... ...+.+ |.++..++. .++++++..+. ..+.+++..+
T Consensus 61 ~aN~lal~~~~~~~~~vi~~~~aHi~~~E~--Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~ 138 (342)
T COG2008 61 QANQLALAAHCQPGESVICHETAHIYTDEC--GAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLEN 138 (342)
T ss_pred HHHHHHHHHhcCCCCeEEEeccccceeccc--CcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEee
Confidence 345567777889999999999988555432 222222 355555553 28999999776 2344555555
Q ss_pred CCCCcccccc---HHHHHHHHHHcCCEEEEeCccC------CCCcCCccCCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 69 PTNPRQQICD---IRKIAEMAHAHGALLLVDNSIM------SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 69 ~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~------~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
.+|..|.+++ +++|.++||++|+.|+.|++-- .+....-...++|.++.+++|..+.| +|.++.-+.
T Consensus 139 ~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~----~gAiv~gn~ 214 (342)
T COG2008 139 TATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAP----VGAIVFGNR 214 (342)
T ss_pred ccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcce----eeeEEEcCH
Confidence 5557799997 7788899999999999999942 23111222347999999999999654 455555555
Q ss_pred hHHHHHHHHHHhcCCCCC--hhhHHHHhhccccHHHHHHHHHHH--HHHHHHHHhcCCCccEEecCCCCCCCchHHHhhh
Q 021783 140 RLAKELYFLQNAEGSGLA--PFDCWICLRGVKTMALRVEKQQDN--AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 215 (307)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~--~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 215 (307)
...+.+.......|..++ .+.+......++.-..+....++| ++.|.+.+...+ ++++.++
T Consensus 215 ~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~--------------G~~~~~~- 279 (342)
T COG2008 215 DFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKP--------------GVKLAFP- 279 (342)
T ss_pred HHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcC--------------CceeccC-
Confidence 565655555444443332 233333334444322333444555 666666665433 3333222
Q ss_pred ccCCCceEEEEeCCHH-HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHH
Q 021783 216 AKGAGSVLSFLTGSLA-LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDL 294 (307)
Q Consensus 216 ~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~ 294 (307)
+ ..+++.+.++... ........+...|+....++ ..+|+-.+.+..++.
T Consensus 280 ~--~tN~vf~~l~~~~i~~l~~~~~~~~~~~~~~~~~----------------------------~~vRfvts~a~~~ed 329 (342)
T COG2008 280 V--ETNMVFVRLPESAIEALRLAGALFYRGVLIGAHG----------------------------EIVRFVTSWATSEED 329 (342)
T ss_pred C--cccEEEEECChHHHHHHHhhchhheeeeeccCCC----------------------------ceEEEEeeccCCHHH
Confidence 1 3567777776432 23333333444444333322 138888887666666
Q ss_pred HHHHHHHHhc
Q 021783 295 ISDLDKALRT 304 (307)
Q Consensus 295 i~~l~~~l~~ 304 (307)
++.|.+.+++
T Consensus 330 v~~~~~~~~~ 339 (342)
T COG2008 330 VDELVAAIKA 339 (342)
T ss_pred HHHHHHHHHH
Confidence 6666665544
No 281
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.61 E-value=6e-14 Score=123.98 Aligned_cols=241 Identities=15% Similarity=0.220 Sum_probs=143.3
Q ss_pred CCeEEEcCCCCcch-HHHHhhhcc------cCC---cEEEEecCCChHHHHhhcC---CCceEEEEeCCCCCcccccc--
Q 021783 14 GEEIVAGDDLYGGT-DRLLSRVTP------KTG---VVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD-- 78 (307)
Q Consensus 14 gd~Vlv~~~~~~~~-~~~~~~~~~------~~g---~~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~-- 78 (307)
.+.|+.....|.+. ...+. ... .++ ..+..++.+|++++++.+. +++.+|+++.+++++|...+
T Consensus 128 ~~~i~~~~~~yhg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~ 206 (401)
T TIGR01885 128 QAIIVSAKGNFHGRTLGAIS-MSTDPDSRTNFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDD 206 (401)
T ss_pred CCEEEEECCCcCcccHHHHh-CcCCcccccccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCH
Confidence 45677777776543 32221 111 122 2356677889999998885 56788999999999999986
Q ss_pred --HHHHHHHHHHcCCEEEEeCccCC-C---CcC--CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH
Q 021783 79 --IRKIAEMAHAHGALLLVDNSIMS-P---VLS--RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 150 (307)
Q Consensus 79 --~~~l~~~~~~~~~~li~D~a~~~-~---~~~--~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~ 150 (307)
+++|.++|++||+++|+||+|.. | ... .......|+++ ++|.+++ .+.++|+++.+++ +.+.+.....
T Consensus 207 ~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~--~gK~l~~-g~~~ig~v~~~~~-i~~~~~~~~~ 282 (401)
T TIGR01885 207 GYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVL--LGKALSG-GVYPVSAVLADDD-VMLTIKPGEH 282 (401)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEEE--eeccccC-CCCCcEEEEEcHH-HHhhccCCCC
Confidence 99999999999999999999842 1 111 11223457665 6699954 4456888888754 4443332111
Q ss_pred hcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC
Q 021783 151 AEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 228 (307)
Q Consensus 151 ~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (307)
.......+..+..+...++.+.. ..++..+....+.+.+++.. .+ +. ...++.+.++.+.++
T Consensus 283 ~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l~------~~---------~~-~~~~g~g~~~~i~~~ 346 (401)
T TIGR01885 283 GSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLP------KP---------II-TEVRGRGLLNAIVID 346 (401)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcc------CC---------ce-eEEeecCeeEEEEec
Confidence 11222335555555566654432 12233333344444444321 00 00 011345777777774
Q ss_pred CH---HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHH
Q 021783 229 SL---ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKA 301 (307)
Q Consensus 229 ~~---~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~ 301 (307)
+. .....+.+.|.++||.+.++. ++.+|+++.+ +++++.++.|.+.
T Consensus 347 ~~~~~~~~~~l~~~l~~~Gv~v~~~~---------------------------~~~lRi~p~l~~t~~~i~~~l~~l~~~ 399 (401)
T TIGR01885 347 ESKTGRTAWDLCLKLKEKGLLAKPTH---------------------------GNIIRLAPPLVITEEQLDEGLEIIKKV 399 (401)
T ss_pred cCcchhHHHHHHHHHHhCCEEEEecC---------------------------CCEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 33 246788888888898764321 3459999865 5666666666655
Q ss_pred H
Q 021783 302 L 302 (307)
Q Consensus 302 l 302 (307)
+
T Consensus 400 l 400 (401)
T TIGR01885 400 I 400 (401)
T ss_pred h
Confidence 4
No 282
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=5.5e-14 Score=112.68 Aligned_cols=219 Identities=18% Similarity=0.247 Sum_probs=133.3
Q ss_pred ChHHHHhhcCCCceEEEEeCCCCCccccc---cHHHHHHHHHHcCCEEEEeCccCCCCcC------CccCCCccEEEecc
Q 021783 49 DLDEVASAIGPWTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS------RPLELGADIVMHSA 119 (307)
Q Consensus 49 d~~~l~~~l~~~~~~v~~~~~~n~tG~~~---~~~~l~~~~~~~~~~li~D~a~~~~~~~------~~~~~~~d~~~~s~ 119 (307)
|.+++. +...+.+|.++-|.||||++. .+.+|.++|++||+++++|.||+.+... .+...++-+.|.|+
T Consensus 170 DF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SL 247 (417)
T COG3977 170 DFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSL 247 (417)
T ss_pred CHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeeh
Confidence 444442 346788999999999999998 3889999999999999999999976532 22233678999999
Q ss_pred ccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccc-----cHHHH-H-HHHHHHHHHHHHHHhcC
Q 021783 120 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALR-V-EKQQDNAQKIAEFLASH 192 (307)
Q Consensus 120 ~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~-~-~~~~~~~~~l~~~l~~~ 192 (307)
||. |.+|.|+|.++.+ +.+...+..+.......+..+....+...++ ++.+. + .-..+..+.....+++.
T Consensus 248 SK~--GLPG~R~GIiIan-e~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~ 324 (417)
T COG3977 248 SKL--GLPGSRCGIIIAN-EKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRY 324 (417)
T ss_pred hhc--CCCCcceeEEEcc-HHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 996 7789999999987 4465555555443332233333333333322 11110 0 00112222222333321
Q ss_pred -CCccEEecCCCCCCCchHHHhhhccCCCceEEEE-e--CCHHHHHHHHhcCCcceeecCCCCccc-eeecccccCCCCC
Q 021783 193 -PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-T--GSLALSKHVVETTKYFSITVSFGSVKS-LISMPCFMSHASI 267 (307)
Q Consensus 193 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~l~~~gi~v~~g~~~~-~~~~p~~~~~~~~ 267 (307)
+....... +..|.+|.|. + -+. ...+++++|+..|+.+.+|++|- -...++. |
T Consensus 325 lp~~~~~iH----------------kpEGAIFlWLWf~dLPI-tt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewp--H--- 382 (417)
T COG3977 325 LPEYRCLIH----------------KPEGAIFLWLWFKDLPI-TTEELYQRLKARGVLMVPGHYFFPGLDKEWP--H--- 382 (417)
T ss_pred cCccceeee----------------cCCcceeehhhhccCCC-CHHHHHHHHHhCeEEEecccccCCCCCCCCC--C---
Confidence 10001111 1134444432 2 233 37889999999999999998742 1211111 1
Q ss_pred cHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 021783 268 PVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 304 (307)
Q Consensus 268 ~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 304 (307)
...|+|+|..- +.++.-+..|.+.+++
T Consensus 383 ----------~hqC~Rmn~~~~~~~ie~Gva~lae~ve~ 411 (417)
T COG3977 383 ----------THQCMRMNYVPEPEKIEKGVAILAEEVER 411 (417)
T ss_pred ----------ccceEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 25789999964 6778888888777654
No 283
>PLN02263 serine decarboxylase
Probab=99.59 E-value=4.6e-13 Score=117.48 Aligned_cols=173 Identities=17% Similarity=0.181 Sum_probs=128.8
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC---CceEEEEeCCCCCccccccHHHHHH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP---WTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
+...|++++..|.+.. ++++..|++++.||.+ |+++|++++.. ++.+|+.+..+.++|.+-|+++|.+
T Consensus 177 ~~~vvy~S~~aH~Sv~----KAa~llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~ 252 (470)
T PLN02263 177 PDGILYASRESHYSVF----KAARMYRMECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIK 252 (470)
T ss_pred CCcEEEEcCCccHHHH----HHHHhcCCcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHH
Confidence 4457889999999888 7788899999999974 89999998863 3566777788999999999999999
Q ss_pred HHHHcCC-----EEEEeCccCCCCcC---Cc----cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH---
Q 021783 85 MAHAHGA-----LLLVDNSIMSPVLS---RP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--- 149 (307)
Q Consensus 85 ~~~~~~~-----~li~D~a~~~~~~~---~~----~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~--- 149 (307)
+|+++|+ |+++|+|++....+ .. ...++|.++.++|||++.|-+ +|+++.+++.+ +.+....
T Consensus 253 i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~--cgvll~R~~~~-~~~~~~~~Yl 329 (470)
T PLN02263 253 TLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMP--CGVQITRMEHI-NVLSSNVEYL 329 (470)
T ss_pred HHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcCccEEEECCccccCCCcC--EEEEEEehhhH-hhhccChHhh
Confidence 9999997 99999999754432 11 112489999999999988888 99999996543 2111100
Q ss_pred -----HhcCCCCC--hhhHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcC
Q 021783 150 -----NAEGSGLA--PFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 150 -----~~~~~~~~--~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
...++... ....|..+. |.+.+..+.++..++++.+.+.+++.
T Consensus 330 ~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~ 381 (470)
T PLN02263 330 ASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA 381 (470)
T ss_pred CCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 11222221 344555443 45677778888888999999988866
No 284
>PRK15029 arginine decarboxylase; Provisional
Probab=99.58 E-value=2.9e-14 Score=131.69 Aligned_cols=130 Identities=15% Similarity=0.183 Sum_probs=106.2
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----------C-----hHHHHhhcC--CCce---
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----------D-----LDEVASAIG--PWTK--- 62 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----------d-----~~~l~~~l~--~~~~--- 62 (307)
.++++++.+++||+|+++..+|-|.. ..+...|+++++++.. + ++.+++++. +.++
T Consensus 234 n~a~i~a~~~~gd~Vlv~RN~HKSv~----~al~L~ga~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~ 309 (755)
T PRK15029 234 NRTIMQACMTDNDVVVVDRNCHKSIE----QGLILTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKA 309 (755)
T ss_pred HHHHHHHhcCCCCEEEeecccHHHHH----HHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhcc
Confidence 34788889999999999999999998 6678899999999742 3 888988885 3444
Q ss_pred -----EEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCccCC-----CCcC--Ccc-----C-CCcc-EEEecccccc
Q 021783 63 -----LVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMS-----PVLS--RPL-----E-LGAD-IVMHSATKFI 123 (307)
Q Consensus 63 -----~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~-----~~~~--~~~-----~-~~~d-~~~~s~~K~~ 123 (307)
++++++|+. .|.+.|+++|+++|+++++++++|+||+. +.++ ... . .|+| +++.|+||++
T Consensus 310 ~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL 388 (755)
T PRK15029 310 GQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL 388 (755)
T ss_pred ccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhcc
Confidence 899999987 69999999999999999999999999973 2222 122 2 6888 9999999999
Q ss_pred ccCCCceeEEEEEcCh
Q 021783 124 AGHSDVMAGVLAVKGE 139 (307)
Q Consensus 124 ~g~~g~~~G~~~~~~~ 139 (307)
.+.+- +.++..+..
T Consensus 389 ~alTQ--aS~LHv~~~ 402 (755)
T PRK15029 389 NALSQ--ASYIHVREG 402 (755)
T ss_pred cchhh--hhhheeCCC
Confidence 77664 888888654
No 285
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=7.8e-15 Score=123.52 Aligned_cols=250 Identities=18% Similarity=0.152 Sum_probs=161.9
Q ss_pred HHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC-------CCc-----e-EEEEeCCCCCcc
Q 021783 8 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-------PWT-----K-LVWVESPTNPRQ 74 (307)
Q Consensus 8 ~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~-------~~~-----~-~v~~~~~~n~tG 74 (307)
.+++.||.-|+.....|.+.. .-++..|+.++...++|..+|++.+. |+| + +|++....++-|
T Consensus 215 p~l~~~gsLIiSDelNHaSi~----~GaRLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg 290 (519)
T KOG1357|consen 215 PSLLGKGSLIISDELNHASLI----TGARLSGATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEG 290 (519)
T ss_pred ceeecCCcceeeccccchhee----ccccccCceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccC
Confidence 357889999999999998887 77999999999999999999888876 332 2 555668888999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccCCCCcC----------CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHH
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIMSPVLS----------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 144 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~----------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~ 144 (307)
.++++.++.+++++|.++++.|++|+.|... ..+..++|+++++|.|.+++ . +|++.++++.++.
T Consensus 291 ~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga-~---GGyiagsk~lid~- 365 (519)
T KOG1357|consen 291 TIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGA-A---GGYIAGSKELIDY- 365 (519)
T ss_pred eecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccc-c---cceecCcHHHHhh-
Confidence 9999999999999999999999999876652 22233579999999999953 3 7999988664433
Q ss_pred HHHHHHh--cCCCCChhhHHHHhhcccc---------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 145 LYFLQNA--EGSGLAPFDCWICLRGVKT---------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 145 ~~~~~~~--~~~~~~~~~~~~~~~~l~~---------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
+...... -...+++..+.....+++. -+.+.+++.+|...++..++... +..-+-+
T Consensus 366 lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~g----fivyG~~--------- 432 (519)
T KOG1357|consen 366 LRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMG----FIVYGNN--------- 432 (519)
T ss_pred hccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCc----EEEecCC---------
Confidence 3222111 1223344333333333322 24456666777776666665542 2222211
Q ss_pred hhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHH
Q 021783 214 SQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVND 293 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~ 293 (307)
.++++-+.+-.......+-+++..++|++..++. |+ ...-++..|+..+..+..+
T Consensus 433 -----dSpVvplll~~~~k~~~f~r~~l~~nigvVvvgf------Pa--------------tpl~e~r~R~c~Sa~ht~e 487 (519)
T KOG1357|consen 433 -----DSPVVPLLLYGPAKIVAFSREMLERNIGVVVVGF------PA--------------TPLLESRARFCLSASHTKE 487 (519)
T ss_pred -----CCCcceeeecCcccccHHHHHHHhcCceEEEEeC------CC--------------chHHHhHHHhhhcccccHH
Confidence 1233333332222245555666667776654333 11 1112445888888877777
Q ss_pred HHHHHHHHHhc
Q 021783 294 LISDLDKALRT 304 (307)
Q Consensus 294 ~i~~l~~~l~~ 304 (307)
.++.+.+.+++
T Consensus 488 ~ld~~l~~i~~ 498 (519)
T KOG1357|consen 488 DLDRALEVIDR 498 (519)
T ss_pred HHHHHHHHHhh
Confidence 77776666554
No 286
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.57 E-value=1.2e-13 Score=122.85 Aligned_cols=214 Identities=12% Similarity=0.163 Sum_probs=129.0
Q ss_pred hHHHHhhcC-----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccCC-CCcC---CccCCCccEEE
Q 021783 50 LDEVASAIG-----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLELGADIVM 116 (307)
Q Consensus 50 ~~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~-~~~~---~~~~~~~d~~~ 116 (307)
++++++.+. ++.++|+++...+..|...+ +++|.++|++||+++|+|++|+. +... .....+.+..+
T Consensus 184 ~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi 263 (425)
T PRK08088 184 IASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADL 263 (425)
T ss_pred HHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCE
Confidence 456777764 46788888877665566554 99999999999999999999873 2211 12234566668
Q ss_pred eccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCC
Q 021783 117 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPR 194 (307)
Q Consensus 117 ~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~ 194 (307)
.||+|.++ +|+++|+++++++ +.+.+...........++..+..+...++.... ..++..+..+++.+.+....
T Consensus 264 ~s~sK~l~--~G~rig~v~~~~~-~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~- 339 (425)
T PRK08088 264 TTFAKSIA--GGFPLAGVTGRAE-VMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIA- 339 (425)
T ss_pred EEEecccc--CCCcceeeEecHH-HHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-
Confidence 99999995 5799999999855 444443322223334455556665555543311 11222222222222222110
Q ss_pred ccEEecCCCCCCCchHHHhhhccCCCceEEEEeC--------CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCC
Q 021783 195 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHAS 266 (307)
Q Consensus 195 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~ 266 (307)
...|.+ ...++.|.++++.+. +......+...+.+.|+.+.++..
T Consensus 340 ---------~~~~~~----~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~-------------- 392 (425)
T PRK08088 340 ---------EKHPEI----GDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGP-------------- 392 (425)
T ss_pred ---------HhCCCe----EEEeccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCC--------------
Confidence 001110 012345778888872 234477888888888876543221
Q ss_pred CcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 267 IPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 267 ~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
..+.+|++++. +++++.++.|.++++++
T Consensus 393 -----------~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 393 -----------YYNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred -----------CCCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 12459999984 67788888888887654
No 287
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.57 E-value=3.8e-13 Score=112.14 Aligned_cols=247 Identities=17% Similarity=0.166 Sum_probs=128.6
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcC--CCceEEEEe-CCCCCccccccHHHHHHHH-
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIG--PWTKLVWVE-SPTNPRQQICDIRKIAEMA- 86 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~--~~~~~v~~~-~~~n~tG~~~~~~~l~~~~- 86 (307)
=+.|++.|.|.-.+ .+++.+|++.+.||++ |++.+++.+. +..|.+++. --+||||.+++-+.+.++|
T Consensus 125 vKfLCPvPGYDRHF----ai~E~~Giemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~ 200 (425)
T PF12897_consen 125 VKFLCPVPGYDRHF----AITEHFGIEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAA 200 (425)
T ss_dssp -EEEEEES--HHHH----HHHHHCT-EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHH
T ss_pred ceEEecCCCchHHH----HHHHhhCcEEEecCCCCCCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhc
Confidence 36799999998888 7789999999999984 8999999983 788999877 5799999999855444444
Q ss_pred ---HHcCCEEEEeCccCCCCcC-C-cc--------------CCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH
Q 021783 87 ---HAHGALLLVDNSIMSPVLS-R-PL--------------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 147 (307)
Q Consensus 87 ---~~~~~~li~D~a~~~~~~~-~-~~--------------~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~ 147 (307)
...+..|+.|+||+..++. + .. .-+..+...|+||.....+| ++++..+++.+......
T Consensus 201 m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaG--va~~aaS~~Nl~~~~~~ 278 (425)
T PF12897_consen 201 MKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAG--VAFFAASEANLAWIKKH 278 (425)
T ss_dssp S--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS---EEEEE-HHHHHHHHHH
T ss_pred CCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcc--eeeeecCHHHHHHHHHH
Confidence 3469999999999976652 1 11 11357999999997644445 89999987655544443
Q ss_pred HHHhcCCCCChhhHHH---Hhhccc-cHHHHHHHHHHHHH----HHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 148 LQNAEGSGLAPFDCWI---CLRGVK-TMALRVEKQQDNAQ----KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 148 ~~~~~~~~~~~~~~~~---~~~~l~-~~~~~~~~~~~~~~----~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
+..... +.....+.. .....+ .++..++++.+..+ .+.+.|+++ |..-.++-.|.+ |+ .
T Consensus 279 ~~~~tI-gpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~----------L~~~~~ia~Wt~-P~-G 345 (425)
T PF12897_consen 279 LSVQTI-GPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEE----------LGDGLGIASWTK-PK-G 345 (425)
T ss_dssp HHHH-S----HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HGTGGTSEEE----S-B
T ss_pred hcCcee-CccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHh----------cCCCCCeeEecC-CC-C
Confidence 333222 112122221 111122 22333333332221 122222221 100001111222 22 4
Q ss_pred CceEEEEeCCHHHHHHHHhcCCcceeecC-CCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCCh---HHHH
Q 021783 220 GSVLSFLTGSLALSKHVVETTKYFSITVS-FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDV---NDLI 295 (307)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~-~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~---~~~i 295 (307)
|.+++|...+.- +..+++.+++.||... .|..|..-.-| .++.|||.+++... +..+
T Consensus 346 GYFIsld~~~G~-AkrvV~lakeAGV~LT~AGAtfPyg~DP------------------~D~nIRiAPS~P~leel~~Am 406 (425)
T PF12897_consen 346 GYFISLDVLDGT-AKRVVELAKEAGVALTPAGATFPYGKDP------------------RDSNIRIAPSYPSLEELETAM 406 (425)
T ss_dssp SS-EEEEESTT--HHHHHHHHHHTTEE---TTTTSGGG--T------------------TS-EEEE--SSS-HHHHHHHH
T ss_pred ceEEEEecCCCh-HHHHHHHHHHhCceeCCCCCCCCCCCCC------------------CCCcEEecCCCCCHHHHHHHH
Confidence 789999987654 8899999999999654 46654322111 35779999988544 4444
Q ss_pred HHHH
Q 021783 296 SDLD 299 (307)
Q Consensus 296 ~~l~ 299 (307)
+.|.
T Consensus 407 ~~~~ 410 (425)
T PF12897_consen 407 DVFA 410 (425)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 288
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.56 E-value=5.9e-14 Score=123.51 Aligned_cols=246 Identities=13% Similarity=0.164 Sum_probs=145.9
Q ss_pred CeEEEcCCCCcchHHHHhhhc------ccCC---cEEEEecCCChHHHHhhcC-CCceEEEEeCCCCCcccccc-----H
Q 021783 15 EEIVAGDDLYGGTDRLLSRVT------PKTG---VVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICD-----I 79 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~------~~~g---~~~~~v~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~-----~ 79 (307)
.+|+....+|.+......... ..++ -.+..+|.+|++.+++.+. .++.+++++.. +++|-+.+ +
T Consensus 132 ~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~-~~~gg~~~~~~~~l 210 (408)
T PRK04612 132 RVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEPI-QGEGGVMPAAPGFL 210 (408)
T ss_pred cEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECCc-cCCCCCcCCCHHHH
Confidence 468877776666542211110 0011 1235566779999999886 45566666654 44554432 9
Q ss_pred HHHHHHHHHcCCEEEEeCccCC-CCc---CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCC
Q 021783 80 RKIAEMAHAHGALLLVDNSIMS-PVL---SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 155 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~-~~~---~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~ 155 (307)
++|.++|++||+++|+||+|+. +.. ......+.+..+.+++|.++ +|++.|+++++++ +.+.+..........
T Consensus 211 ~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~--~G~piga~~~~~~-~~~~~~~~~~~~t~~ 287 (408)
T PRK04612 211 ARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALG--GGFPIGAMLAGPK-VAETMQFGAHGTTFG 287 (408)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhc--CCCceEEEEECHH-HHhhhcCCCcCCCCC
Confidence 9999999999999999999962 221 11123466778889999994 4688999988854 444333222222233
Q ss_pred CChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCC-CccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC--HHH
Q 021783 156 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LAL 232 (307)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 232 (307)
.++..+..+.+.++.++. +++.++++.+.+++.+.- .+ .-.++.+. ..++.|.++.+.+.. .+.
T Consensus 288 ~~p~~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~l~~l-~~~~~~i~----------~vrg~Gl~~~i~~~~~~~~~ 354 (408)
T PRK04612 288 GNPLAAAVARVALRKLAS--PQIAANVARQSAALRAGLEAL-NAEFGVFA----------QVRGRGLMLGAVLAPAHAGQ 354 (408)
T ss_pred CCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHH-HhhCCCee----------eeeccceEEEEEecCchhhH
Confidence 456667776666665532 233444444444333210 00 00011111 125568888888742 234
Q ss_pred HHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 233 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 233 ~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+..+.+.+.++|+.+...+ .+.+|+.+.+ +++++.++.|.+++.+
T Consensus 355 a~~i~~~l~~~Gvlv~~~g---------------------------~~~lRl~Ppl~it~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 355 AGAILDLAAEHGLLLLQAG---------------------------PDVLRFVPALNLTDAELADGLARLRLALAD 403 (408)
T ss_pred HHHHHHHHHHCCeEEeeCC---------------------------CCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 6778888888888764311 2448888764 7888888888888764
No 289
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.56 E-value=2.9e-13 Score=116.91 Aligned_cols=223 Identities=16% Similarity=0.160 Sum_probs=143.5
Q ss_pred cHH-HHHHHhc-CCCCeEEEcCCCCcchHHHHh-hhcccCCc-EEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCC
Q 021783 2 AAL-AAVTHLL-GTGEEIVAGDDLYGGTDRLLS-RVTPKTGV-VVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNP 72 (307)
Q Consensus 2 aal-~~~~~~~-~~gd~Vlv~~~~~~~~~~~~~-~~~~~~g~-~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~ 72 (307)
+++ +++.+++ ++||+|++.. .| + .-|. ..++..|+ ++..++.. |+++++. . +.|.++|..+.
T Consensus 69 ~a~Eaa~~nl~~~~g~~vLv~g-~F-G--~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~---~~v~~vhnETS 139 (374)
T TIGR01365 69 GAVEMALWSMLGCRGVDVLAWE-SF-G--KGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K---NDVVFTWNGTT 139 (374)
T ss_pred HHHHHHHHHcCCCCCCeEEEEC-HH-H--HHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C---CCEEEecCCCc
Confidence 456 6677788 5899999854 33 2 2344 66778888 46666542 6777763 1 23678999999
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH-----
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY----- 146 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~----- 146 (307)
||...|++++.... ++.++++|++.+.|..+ ++. ++|++++|.+|++++|+| .++++.+++.+.+...
T Consensus 140 TGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d--~iDv~~tgsQK~L~~ppG--ls~v~vs~~Al~~~~~~~~y~ 213 (374)
T TIGR01365 140 SGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH--KLDVVTFSWQKVLGGEGA--HGMLILSPRAVARLESYTPAW 213 (374)
T ss_pred hheecccccccccc--CCCcEEEEccchhcCCCCChh--HCcEEEEechhccCCCCc--eEEEEECHHHHHHHhhcCCCC
Confidence 99999987666322 48999999999988877 444 499999999999999999 9999999877654221
Q ss_pred ---HH-H-------------HhcCCCCChhhHHHHhhcc----c--cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCC
Q 021783 147 ---FL-Q-------------NAEGSGLAPFDCWICLRGV----K--TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL 203 (307)
Q Consensus 147 ---~~-~-------------~~~~~~~~~~~~~~~~~~l----~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l 203 (307)
.+ . .....+++....+.....+ + .++.+++++.++++.+++.++..... .+ +
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l-~~----~ 288 (374)
T TIGR01365 214 PLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWI-HF----L 288 (374)
T ss_pred CChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCc-cc----C
Confidence 10 0 0111122222333323323 1 47788888999999999999876411 00 1
Q ss_pred CCCCchHHHhhhccCCCceEEEEeCCHH------H-----HHHHHhcCCcceeecCCCCc
Q 021783 204 PEHPGHELHYSQAKGAGSVLSFLTGSLA------L-----SKHVVETTKYFSITVSFGSV 252 (307)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-----~~~~~~~l~~~gi~v~~g~~ 252 (307)
...+. .+ ...++.+.+.+.. + ...+.+.++.+||.+..|..
T Consensus 289 ~~~~~-------~r-S~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~ 340 (374)
T TIGR01365 289 AETPE-------IR-SNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSY 340 (374)
T ss_pred CCChh-------hc-CCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEecccc
Confidence 00000 01 1234555552211 2 67889899888987776553
No 290
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.54 E-value=2.2e-13 Score=119.57 Aligned_cols=213 Identities=19% Similarity=0.188 Sum_probs=127.9
Q ss_pred ecCCChHHHHhhcCCCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-C---CCcCCccCCC--ccE
Q 021783 45 VNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-S---PVLSRPLELG--ADI 114 (307)
Q Consensus 45 v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~---~~~~~~~~~~--~d~ 114 (307)
++.+|++++++.+.+++++|+++.+++..|...+ +++|.++|++||+++|+|++|+ . |.......++ .|+
T Consensus 164 ~~~~d~~~l~~~l~~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi 243 (395)
T PRK03715 164 AELNDIASVEKLITDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDI 243 (395)
T ss_pred eCCchHHHHHHHcCCCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCce
Confidence 3456899999999888999999999999898876 9999999999999999999997 2 2211112233 465
Q ss_pred EEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcC
Q 021783 115 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 115 ~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~ 192 (307)
.+++|.+++ |..+|.++++++. .. +............+..+..+.+.++.++. ..++..+....+.+.|++.
T Consensus 244 --~t~gK~lg~--G~p~~av~~~~~i-~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l 317 (395)
T PRK03715 244 --MTLGKGIGG--GVPLAALLAKAEV-AV-FEAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLEL 317 (395)
T ss_pred --eeehhhhhC--CcceEEEEEcccc-cc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 567899964 4457888887653 21 11001111223345566666666665532 2233333333444444322
Q ss_pred CCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH--HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHH
Q 021783 193 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 270 (307)
Q Consensus 193 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~ 270 (307)
.. .+ .+. ..++.+.++.+.+.+. .........+...|+.+....
T Consensus 318 ~~----~~-~i~----------~vrG~Glm~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~~~------------------- 363 (395)
T PRK03715 318 SE----ER-GLE----------GERGEGLLRALLLGKDIGPQIVEKARDMQPDGLLLNAPR------------------- 363 (395)
T ss_pred hh----cC-CcC----------eEEcceeEEEEEecCchHHHHHHHHHhccCCCEEEeecC-------------------
Confidence 10 00 011 1245688889988653 122233333444487654211
Q ss_pred HHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 271 VRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 271 ~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
.+.+|+++.+ +++++.++.|.++++++
T Consensus 364 --------~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 364 --------PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred --------CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 2349999976 67777777777777653
No 291
>PLN02452 phosphoserine transaminase
Probab=99.54 E-value=1.5e-13 Score=118.63 Aligned_cols=249 Identities=12% Similarity=0.058 Sum_probs=160.8
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEec---C-----CChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN---T-----CDLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~---~-----~d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
++ ++++.++++||++++-.....+.. +...++.+|...+... . .++++++ .+++.+.+.++|..+.|
T Consensus 83 ~~ea~~~nl~~~~~~~l~~~~G~fg~r--~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~hnETst 158 (365)
T PLN02452 83 QFAAIPLNLCKPGDKADFVVTGSWSKK--AAKEAKKYCKTNVIASGKDEKYTKIPSVSEWE--LTPDAKFVHICANETIH 158 (365)
T ss_pred HHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCCCcEEEecCCCCCCCCCChHHcC--CCCCCcEEEECCCCCCC
Confidence 44 566678899999987766554554 3366777776544431 1 1444432 24578899999999999
Q ss_pred ccc-ccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH---HH
Q 021783 74 QQI-CDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY---FL 148 (307)
Q Consensus 74 G~~-~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~---~~ 148 (307)
|+. .|++++. ++++++|.+++.+..+ ++.++++|+ +|.+|.+ ||+| .|+++++++.+.+... .+
T Consensus 159 Gv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~v~~--~saqK~l-GP~G--l~~v~vr~~~l~~~~~~~~~~ 227 (365)
T PLN02452 159 GVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYGVIY--AGAQKNV-GPSG--VTIVIIRKDLIGNARPITPGM 227 (365)
T ss_pred cEecCcccccC------CCeEEEECCccccCcccCHHHcCEEE--Eeccccc-CCCC--eEEEEEcHHHHhhcccCCCch
Confidence 995 6777664 3899999999999887 888888766 6999999 6999 9999999776644211 00
Q ss_pred -------HHhcC-CCCChhhHHHHhhccc------cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhh
Q 021783 149 -------QNAEG-SGLAPFDCWICLRGVK------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 149 -------~~~~~-~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 214 (307)
..... .+++....+....+++ .++.+.++..+.++.+.+.+++.+++ +....+ +
T Consensus 228 ~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~---y~~~~~--~------- 295 (365)
T PLN02452 228 LDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGF---YVCPVE--K------- 295 (365)
T ss_pred hhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCc---ccCCCC--h-------
Confidence 01111 1223333333333332 34555666677778888888765432 111000 0
Q ss_pred hccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe----ccCC
Q 021783 215 QAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIED 290 (307)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~----~~~~ 290 (307)
. .....+++|.+++.+..++|++.++.+|+..-.|... -+-+|+|. ..++
T Consensus 296 ~-~rs~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~G~r~-------------------------~gg~R~s~yna~~~~~ 349 (365)
T PLN02452 296 S-VRSLMNVPFTLGGSELEAEFVKEAAKAGMVQLKGHRS-------------------------VGGMRASIYNAMPLAG 349 (365)
T ss_pred H-HhCCeEEEEEcCCchhHHHHHHHHHHCCCcccCCccc-------------------------cCceEEECcCCCCHHH
Confidence 0 1124578898877777899999999999977666530 11299998 2377
Q ss_pred hHHHHHHHHHHHhc
Q 021783 291 VNDLISDLDKALRT 304 (307)
Q Consensus 291 ~~~~i~~l~~~l~~ 304 (307)
++.+++.++++-++
T Consensus 350 v~~L~~~m~~f~~~ 363 (365)
T PLN02452 350 VEKLVAFMKDFQAK 363 (365)
T ss_pred HHHHHHHHHHHHHh
Confidence 77777777766543
No 292
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.54 E-value=1.6e-12 Score=112.79 Aligned_cols=183 Identities=19% Similarity=0.208 Sum_probs=117.0
Q ss_pred cHHHHH-HHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC---------------CChHHHHhhcCC----Cc
Q 021783 2 AALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---------------CDLDEVASAIGP----WT 61 (307)
Q Consensus 2 aal~~~-~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------------~d~~~l~~~l~~----~~ 61 (307)
+|+.++ ...++|||+| +++.|..... ......|+.++-++. .|++++++.+++ ++
T Consensus 97 ~Al~ll~~l~l~pGDeV--psn~~f~Tt~---ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~ 171 (450)
T TIGR02618 97 GAENLLSQIAIKPGDYV--PGNMYFTTTR---YHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKI 171 (450)
T ss_pred HHHHHHHHhCCCCcCEE--CCceeHHHHH---HHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCccc
Confidence 344333 3468999987 6677755552 224667776666622 189999999974 44
Q ss_pred eEEEEeCCCCCc-cccc---cHHHHHHHHHHcCCEEEEeCccCCCC--c---------CCcc-------CCCccEEEecc
Q 021783 62 KLVWVESPTNPR-QQIC---DIRKIAEMAHAHGALLLVDNSIMSPV--L---------SRPL-------ELGADIVMHSA 119 (307)
Q Consensus 62 ~~v~~~~~~n~t-G~~~---~~~~l~~~~~~~~~~li~D~a~~~~~--~---------~~~~-------~~~~d~~~~s~ 119 (307)
++|.++.++|.. |..+ +++++.++|++||+.+|+|+|+..+. + .... ...+|.++.|+
T Consensus 172 ~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~ 251 (450)
T TIGR02618 172 PYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSG 251 (450)
T ss_pred CceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEee
Confidence 577777777755 7884 58999999999999999999987532 1 1111 12589999999
Q ss_pred ccccccCCCceeEEEEEcChhHHHHHHHHHHh-cCC----CCChhhHHHHhhccccHH--HHHHHHHHHHHHHHHHHhcC
Q 021783 120 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EGS----GLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 120 ~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~ 192 (307)
+|..+++. +|+++.+++.+.+..+..... .|. .++.-.......+++... ...+...++++.|.+.|.+.
T Consensus 252 ~Kd~~~~~---GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~ 328 (450)
T TIGR02618 252 KKDCLVNI---GGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA 328 (450)
T ss_pred ccCCCCCC---ceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC
Confidence 99997765 699998888887776655322 221 112111111122333221 22333445678888888765
No 293
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.53 E-value=2.1e-12 Score=112.49 Aligned_cols=182 Identities=19% Similarity=0.169 Sum_probs=115.4
Q ss_pred HHHHHHH-hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEec------------C---CChHHHHhhcCC----Cce
Q 021783 3 ALAAVTH-LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN------------T---CDLDEVASAIGP----WTK 62 (307)
Q Consensus 3 al~~~~~-~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~------------~---~d~~~l~~~l~~----~~~ 62 (307)
|+.++.. .++|||+| +...|..... ......|+..+-++ . .|++++++.|++ +++
T Consensus 105 Al~ll~~l~v~pGd~V--p~n~~f~Tt~---ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~ 179 (460)
T PRK13237 105 AENLLSRIAIKPGQYV--PGNMYFTTTR---YHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIA 179 (460)
T ss_pred HHHHHHHhCCCCcCEE--CCccchHhhH---HHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccC
Confidence 4433333 57999975 5555555542 22456677555442 1 289999999974 344
Q ss_pred EEEEeCCCCCc-cccc---cHHHHHHHHHHcCCEEEEeCccCCCCc----------C-Cc-c------CCCccEEEeccc
Q 021783 63 LVWVESPTNPR-QQIC---DIRKIAEMAHAHGALLLVDNSIMSPVL----------S-RP-L------ELGADIVMHSAT 120 (307)
Q Consensus 63 ~v~~~~~~n~t-G~~~---~~~~l~~~~~~~~~~li~D~a~~~~~~----------~-~~-~------~~~~d~~~~s~~ 120 (307)
++.++.++|.. |..+ +++++.++|++||+.+|+|+|+..+.. . .. . ....|.+++|++
T Consensus 180 lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~ 259 (460)
T PRK13237 180 YICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGK 259 (460)
T ss_pred ceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCC
Confidence 56666667776 5665 689999999999999999999976521 1 11 0 124799999999
Q ss_pred cccccCCCceeEEEEEcChhHHHHHHHHHHh-cCC----CCCh-hhHHHHhhccccHH-HHHHHHHHHHHHHHHHHhcC
Q 021783 121 KFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EGS----GLAP-FDCWICLRGVKTMA-LRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 121 K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~-~~~----~~~~-~~~~~~~~~l~~~~-~~~~~~~~~~~~l~~~l~~~ 192 (307)
|.+..+. +|+++++++.+.+..+...-. .|. .++. ....++....+... ...+...++.+.|.+.|.+.
T Consensus 260 K~~~~~~---GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 260 KDCLVNI---GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLAA 335 (460)
T ss_pred CCCCCCC---ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHHC
Confidence 9996654 799999999888877766322 121 2222 11222222222221 34455567778888888765
No 294
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.53 E-value=7.5e-14 Score=123.80 Aligned_cols=212 Identities=11% Similarity=0.124 Sum_probs=126.5
Q ss_pred hHHHHhhc-----CCCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccCC-CC---cCCccCCCccEEE
Q 021783 50 LDEVASAI-----GPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PV---LSRPLELGADIVM 116 (307)
Q Consensus 50 ~~~l~~~l-----~~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~-~~---~~~~~~~~~d~~~ 116 (307)
++.+++.+ .+++.+|+++..+..+|...+ +++|.++|++||+++|+||+|.. +. ......++....+
T Consensus 182 ~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi 261 (420)
T TIGR00700 182 LAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDL 261 (420)
T ss_pred HHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCE
Confidence 45566554 257899999998888898875 99999999999999999999862 22 1122233433335
Q ss_pred eccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCC
Q 021783 117 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPR 194 (307)
Q Consensus 117 ~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~ 194 (307)
.+++|.++ +|+++|+++++++ +.+.+...........++..+..+.+.++.+.. ..+...+..+.+.+.++....
T Consensus 262 ~~lsK~l~--~G~pig~v~~~~~-i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~ 338 (420)
T TIGR00700 262 ITTAKSLA--DGLPLSGVTGRAE-IMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKA 338 (420)
T ss_pred EEeecccc--CCcceEEEEecHH-HHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh
Confidence 56999994 5789999999854 444332222222333445566665555543321 112222222233333332110
Q ss_pred ccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-------CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCC
Q 021783 195 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 267 (307)
Q Consensus 195 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~ 267 (307)
.+|.+ ...++.|.++++.+. +.+....+.+.+..+|+.+.+++.+
T Consensus 339 ----------~~~~~----~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f-------------- 390 (420)
T TIGR00700 339 ----------VDPRI----GDVRGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF-------------- 390 (420)
T ss_pred ----------hCCCE----EEeeccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC--------------
Confidence 00100 011345778888762 2344677888888889988765431
Q ss_pred cHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 021783 268 PVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 303 (307)
Q Consensus 268 ~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 303 (307)
.+++|++++. +++++.++.|.++|+
T Consensus 391 -----------~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 391 -----------GNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred -----------CCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 2459999864 667777777777664
No 295
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=3.9e-13 Score=119.78 Aligned_cols=216 Identities=17% Similarity=0.208 Sum_probs=129.0
Q ss_pred ChHHHHhhcC-----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccCC-CCcC---CccCCCccEE
Q 021783 49 DLDEVASAIG-----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLELGADIV 115 (307)
Q Consensus 49 d~~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~-~~~~---~~~~~~~d~~ 115 (307)
+++++++.+. .++.+|+++......|.+.+ +++|.++|++||+++|+||+|+. |... ....+|...-
T Consensus 191 ~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pD 270 (433)
T PRK08117 191 CLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPD 270 (433)
T ss_pred HHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCC
Confidence 4455666542 46889999999888899887 99999999999999999999972 1111 1123454444
Q ss_pred EeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCC-C
Q 021783 116 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP-R 194 (307)
Q Consensus 116 ~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~-~ 194 (307)
+.+++|.++ .|+++|+++++++ +.+.+...........++..+..+.+.++.+.. +.+.++.+.+.++++..- .
T Consensus 271 i~t~sK~lg--~G~pigav~~~~~-i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~ 345 (433)
T PRK08117 271 IMTIAKGIA--SGLPLSAVVASKE-LMEQWPLGSHGTTFGGNPVACAAALATLEVIKE--EKLLDNANEMGAYALERLEV 345 (433)
T ss_pred Eeehhhhcc--CCCcceeEEEcHH-HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH
Confidence 578999995 4788999998855 443332211112223455666666666654422 223333333333333210 0
Q ss_pred ccEEecCCCCCCCchHHHhhhccCCCceEEEEeC------CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCc
Q 021783 195 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIP 268 (307)
Q Consensus 195 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~ 268 (307)
+.. .++.. ...++.+.++.+.+. +.+....+.+.+.++|+.+....
T Consensus 346 l~~-~~~~~----------~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----------------- 397 (433)
T PRK08117 346 LKE-KHPVI----------GDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCG----------------- 397 (433)
T ss_pred HHh-cCCce----------eeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecC-----------------
Confidence 000 01100 012455677777773 22345667777877888654311
Q ss_pred HHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 269 VEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 269 ~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
...+++|++++. +++++.++.|.++++++
T Consensus 398 --------~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 398 --------NAGNVLRMIPPLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred --------CCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 113569999754 78888888888877643
No 296
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.52 E-value=3.6e-13 Score=118.97 Aligned_cols=214 Identities=14% Similarity=0.176 Sum_probs=125.5
Q ss_pred ChHHHHhhcC------CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCC---cC--CccCCCc
Q 021783 49 DLDEVASAIG------PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPV---LS--RPLELGA 112 (307)
Q Consensus 49 d~~~l~~~l~------~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~---~~--~~~~~~~ 112 (307)
+++.+++.+. +++++|+++..+++.|...+ +++|.++|++||+++|+|+++. .|. .. .......
T Consensus 177 ~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~P 256 (412)
T TIGR02407 177 TIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEP 256 (412)
T ss_pred HHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCC
Confidence 3666777775 35689999999998898642 9999999999999999999986 222 21 1122345
Q ss_pred cEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhcccc-HHHHHHHHHHHHHHHHHHHhc
Q 021783 113 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-MALRVEKQQDNAQKIAEFLAS 191 (307)
Q Consensus 113 d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~l~~~l~~ 191 (307)
|++ +++|++ ++.|+++|+++++++ + ..+............+.....+.+.++. +.. .++.++.+.+.+++++
T Consensus 257 Di~--~~~K~l-g~~G~pigav~~~~~-~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~--~~l~~~~~~~g~~l~~ 329 (412)
T TIGR02407 257 DIV--CLSKSI-SGYGLPLALTLIKPE-L-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSD--DAFEKAVQRKSEIIQE 329 (412)
T ss_pred CEE--Eechhc-cCCccceeEEEEchh-h-hccCCCccCCCCCccHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHH
Confidence 655 578999 444788999999865 3 2222111111122233333333444432 211 2233444444443332
Q ss_pred CCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHH
Q 021783 192 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEV 271 (307)
Q Consensus 192 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~ 271 (307)
+-. .+ .. .++.. + ...++.|.++++.+.+.+....+.+.+..+||.+.....
T Consensus 330 ~l~--~l-~~---~~~~~-~--~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~~------------------- 381 (412)
T TIGR02407 330 RLD--RI-VA---EYPEL-I--KQVRGRGLMQGIECGDGDLAGKIAKAAFENGLIIETSGP------------------- 381 (412)
T ss_pred HHH--HH-Hh---hCCCc-e--EeeecceeEEEEEecChHHHHHHHHHHHHCCCEEeccCC-------------------
Confidence 210 00 00 01100 0 022456788899997766678888888889987754221
Q ss_pred HHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 021783 272 RQARGLTEDLVRISVGI----EDVNDLISDLDKALR 303 (307)
Q Consensus 272 ~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 303 (307)
..+.||++++. +++++.++.|.++|+
T Consensus 382 ------~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 382 ------NDEVIKLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred ------CCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 13459999986 566666666666664
No 297
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.51 E-value=6.2e-13 Score=118.47 Aligned_cols=220 Identities=15% Similarity=0.180 Sum_probs=135.4
Q ss_pred EEEecCCChHHHHhhcC------CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---Cc
Q 021783 42 VKRVNTCDLDEVASAIG------PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RP 107 (307)
Q Consensus 42 ~~~v~~~d~~~l~~~l~------~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~ 107 (307)
+..+|.+|.+++++.+. .++.+|+++..+...|.+.+ ++++.++|++||+++|+||++. .|... ..
T Consensus 207 ~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~ 286 (459)
T PRK11522 207 FRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFAC 286 (459)
T ss_pred CcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhh
Confidence 34556678888888774 45789999999988899886 9999999999999999999994 22211 22
Q ss_pred cCCC--ccEEEeccccccccCCC-ceeEEEEEcChhHHHHHHHHHHhcCCCC--ChhhHHHHhhccccHHH--HHHHHHH
Q 021783 108 LELG--ADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGVKTMAL--RVEKQQD 180 (307)
Q Consensus 108 ~~~~--~d~~~~s~~K~~~g~~g-~~~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~--~~~~~~~ 180 (307)
..+| .|++ +++|.+++ | +.+|.++++++ +.+.+.......+++. .+..+..+.+.++.++. ..++..+
T Consensus 287 e~~gv~PDiv--t~gK~lgg--G~~Pigav~~~~~-i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~ 361 (459)
T PRK11522 287 EHENVQPDIL--CLAKALGG--GVMPIGATIATEE-VFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQ 361 (459)
T ss_pred hccCCCCCEE--EechhhhC--CCccceeEEEcHH-HHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 2234 4655 68999964 3 23677777744 4333321111122222 55666666666665532 1223333
Q ss_pred HHHHHHHHHhcCCCccEEecC-CCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecc
Q 021783 181 NAQKIAEFLASHPRVKKVNYA-GLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMP 259 (307)
Q Consensus 181 ~~~~l~~~l~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p 259 (307)
..+.+.+.|++... .++ .+. ..++.|.++.+.+.+.+....+.+.+.++|+.+.....
T Consensus 362 ~g~~l~~~L~~l~~----~~~~~i~----------~VrG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~~------- 420 (459)
T PRK11522 362 KGDYLLDGFRQLAR----EYPDLVQ----------EARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTLN------- 420 (459)
T ss_pred HHHHHHHHHHHHHH----hCCCcee----------eEEeceeEEEEEecCchHHHHHHHHHHHCCeEEEecCC-------
Confidence 33334443332210 011 001 12556888899886655567788888888987753211
Q ss_pred cccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 260 CFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
..+.+|+.+.+ ++++++++.|.++++++
T Consensus 421 ------------------~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~ 452 (459)
T PRK11522 421 ------------------NAKTIRIEPPLTLTIEQCEQVLKAARKALAAM 452 (459)
T ss_pred ------------------CCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 13459988875 77888888888777643
No 298
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.50 E-value=7.7e-14 Score=114.62 Aligned_cols=247 Identities=16% Similarity=0.190 Sum_probs=131.5
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 94 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li 94 (307)
-.|+...|-|+.+.. .....+....+... |...+...-++.+-+=+|++||||.|.+-. .+++.-+..+|
T Consensus 97 ~~VVa~aPYY~~Y~~-qt~~f~s~~y~w~G----da~~~~~~~~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I 166 (363)
T PF04864_consen 97 ASVVAAAPYYSSYPE-QTDFFDSRLYKWAG----DASNFKNSDNPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVI 166 (363)
T ss_dssp EEEEE-SS--CHHHH-HCCCT-BTTEEEEE----ECCCGTT-S-CCGEEEEEESS-TTT-----------SSTTTEEEEE
T ss_pred ceeEecCCCccchHH-HHHhccccCccccc----cHHhhccCCCCCCeEEEEeCCCCCcccccc-----hhcCCCCccee
Confidence 478888888876652 22223322223322 222221111133445589999999997642 23345566789
Q ss_pred EeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccc----
Q 021783 95 VDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---- 169 (307)
Q Consensus 95 ~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---- 169 (307)
.|-||--|++. -....+.|++++|+||.- |++|.|.||.+++++.+.+++..+......+.+...+.-+..-|+
T Consensus 167 ~D~AYYWPhyTpI~~~aD~DiMLFT~SK~T-GHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~ 245 (363)
T PF04864_consen 167 HDLAYYWPHYTPITAPADHDIMLFTLSKLT-GHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLD 245 (363)
T ss_dssp EE-TT-STTTS---S-B--SEEEEEHHHHC-S-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHH
T ss_pred eeeeeecccccccCCCCCCceEEEEEeccc-CccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHh
Confidence 99999888764 444567899999999988 899999999999999998888777766665555544433222221
Q ss_pred ----------cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhc-cCCCceEEEEeCCHHHHHHHHh
Q 021783 170 ----------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA-KGAGSVLSFLTGSLALSKHVVE 238 (307)
Q Consensus 170 ----------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 238 (307)
-+.-..+...+...+|.+.+.... .+.++.+. |+...+-... ...+.+-|+++...+ ...+.+
T Consensus 246 ~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~---rFSLq~~~--~~yC~ff~~~~~psPafAWlkCe~ee-d~DC~~ 319 (363)
T PF04864_consen 246 GYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASK---RFSLQKFS--PQYCNFFKRVREPSPAFAWLKCEREE-DEDCYA 319 (363)
T ss_dssp HCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSS---SEEE---S--CEEETTTTCEEE---SEEEEEESSCG-GSSHHH
T ss_pred cccCCCCccchHHHHHHHHHHHHHHHHHHHHhcC---ceecCcCC--chhccccccccCCCCCeEEEecCCcc-cccHHH
Confidence 122223344555566666666554 23334331 2222221111 113456677775433 355556
Q ss_pred cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHH
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDK 300 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~ 300 (307)
.|+..+|..+.|.. .|.+..++|||+-. ++.+.++++|.+
T Consensus 320 ~l~~~~I~tr~G~~----------------------fga~~ryVRlSml~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 320 VLREAKIITRSGVL----------------------FGADSRYVRLSMLKRDDDFDQLLERLSK 361 (363)
T ss_dssp HHHCTTEEEEEGGG----------------------GTS-TTEEEEESSS-HHHHHHHHHHHHC
T ss_pred HHHhCCcccCCCCc----------------------cCCCCCeEEEeccCCHHHHHHHHHHHHh
Confidence 66678888888876 45568889999953 677777777754
No 299
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.50 E-value=1.8e-13 Score=121.20 Aligned_cols=214 Identities=10% Similarity=0.075 Sum_probs=127.7
Q ss_pred hHHHHhhcC-----CCceEEEEeCCCCCccccc-c---HHHHHHHHHHcCCEEEEeCccCC-CCc---CCccCCCccEEE
Q 021783 50 LDEVASAIG-----PWTKLVWVESPTNPRQQIC-D---IRKIAEMAHAHGALLLVDNSIMS-PVL---SRPLELGADIVM 116 (307)
Q Consensus 50 ~~~l~~~l~-----~~~~~v~~~~~~n~tG~~~-~---~~~l~~~~~~~~~~li~D~a~~~-~~~---~~~~~~~~d~~~ 116 (307)
++.+++.+. .++++|+++..++++|... | +++|.++|++||+++|+||++.. +.. .....++..--+
T Consensus 183 ~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi 262 (421)
T PRK09792 183 LDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDL 262 (421)
T ss_pred HHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcE
Confidence 467777764 4678999998899999775 5 99999999999999999999862 221 111223322225
Q ss_pred eccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 021783 117 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVK 196 (307)
Q Consensus 117 ~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 196 (307)
.+++|.++ +|.++|+++++++ +.+.+...........++..+..+.+.++.+.. .++.++.+.+.++++..-.
T Consensus 263 ~t~gK~l~--~G~pigav~~~~~-i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~--~~~~~~~~~~g~~l~~~l~-- 335 (421)
T PRK09792 263 MTMAKSLA--GGMPLSGVVGNAN-IMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDK--ESLCERANQLGQRLKNTLI-- 335 (421)
T ss_pred EEeehhhc--CCCceEEEEEcHH-HHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHH--
Confidence 78999995 4688999998755 443332222222233445555655555544432 1233333344443332100
Q ss_pred EEecCCCCCCCchHHHhhhccCCCceEEEEeCCH-------HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcH
Q 021783 197 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 269 (307)
Q Consensus 197 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~ 269 (307)
.+ .+.+|.+ ..+++.|.++++.+.+. .....+.+.+..+|+.+....
T Consensus 336 ~l----~~~~p~v----~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g------------------ 389 (421)
T PRK09792 336 DA----KESVPAI----AAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCG------------------ 389 (421)
T ss_pred HH----HHhCCCc----ceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecC------------------
Confidence 00 0011110 12356688999988532 346778888888888763211
Q ss_pred HHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 021783 270 EVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 303 (307)
Q Consensus 270 ~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 303 (307)
...+.+|+.+++ +++++.++.|.++++
T Consensus 390 -------~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 390 -------AYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred -------CCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 124569999876 566666667666653
No 300
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.49 E-value=7.6e-13 Score=121.32 Aligned_cols=129 Identities=20% Similarity=0.253 Sum_probs=102.0
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhh-hcccCCcEEEEecCC----------C-----hHHHHhhcCCC------
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSR-VTPKTGVVVKRVNTC----------D-----LDEVASAIGPW------ 60 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~----------d-----~~~l~~~l~~~------ 60 (307)
+.+++++.+++||.||++..+|-|.. + ++...|+.++++... + .+.+++++...
T Consensus 203 n~a~i~a~~~~Gd~VLvdRN~HKSv~----hgaLiLsGa~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~ 278 (720)
T PRK13578 203 NKVVTNALLTPGDLVLFDRNNHKSNH----HGALIQAGATPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERAD 278 (720)
T ss_pred HHHHHHHhcCCCCEEEeecccHHHHH----HHHHHHcCCeEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccc
Confidence 34788889999999999999998887 4 367889999998752 3 45577777532
Q ss_pred ----ceEEEEeCCCCCccccccHHHHHHH-HHHcCCEEEEeCccCC-----CC---cC-CccCCCcc----EEEeccccc
Q 021783 61 ----TKLVWVESPTNPRQQICDIRKIAEM-AHAHGALLLVDNSIMS-----PV---LS-RPLELGAD----IVMHSATKF 122 (307)
Q Consensus 61 ----~~~v~~~~~~n~tG~~~~~~~l~~~-~~~~~~~li~D~a~~~-----~~---~~-~~~~~~~d----~~~~s~~K~ 122 (307)
.+++++++|+. .|.+.|+++|+++ ++.++ +|++|+||+. +. ++ ...+.|.| +++.|.||.
T Consensus 279 ~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKt 356 (720)
T PRK13578 279 EARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQ 356 (720)
T ss_pred cccCceEEEEECCCC-cceeecHHHHHHHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhc
Confidence 58999999987 7999999999999 68888 9999999863 11 11 22456888 999999999
Q ss_pred cccCCCceeEEEEEcCh
Q 021783 123 IAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 123 ~~g~~g~~~G~~~~~~~ 139 (307)
+.+.+- +.++..++.
T Consensus 357 L~alTQ--aS~LHvk~~ 371 (720)
T PRK13578 357 QAGFSQ--TSQIHKKDN 371 (720)
T ss_pred chhhhh--HhhhhcCCc
Confidence 987764 778877654
No 301
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.49 E-value=4.5e-12 Score=112.66 Aligned_cols=247 Identities=11% Similarity=0.074 Sum_probs=142.9
Q ss_pred CCeEEEcCCCCcchHHHHhhhccc-----------CCcEEEEecCCC-----hHHHHhhcC---CCceEEEEeC-CCCCc
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPK-----------TGVVVKRVNTCD-----LDEVASAIG---PWTKLVWVES-PTNPR 73 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~-----------~g~~~~~v~~~d-----~~~l~~~l~---~~~~~v~~~~-~~n~t 73 (307)
..+|+....+|.+........... .+...+.++.+| ++++++.+. +++.+|+++. +++..
T Consensus 134 r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~g 213 (423)
T PRK05964 134 RSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAG 213 (423)
T ss_pred CcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCC
Confidence 457888787777654322221111 122333333345 788888874 5678888887 57777
Q ss_pred ccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHH
Q 021783 74 QQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 145 (307)
Q Consensus 74 G~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~ 145 (307)
|...+ +++|.++|++||+++|+||+|. .|... ....++...-+.+++|++++ +++.+|+++.+++ +.+.+
T Consensus 214 G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~g-G~~p~~av~~~~~-i~~~~ 291 (423)
T PRK05964 214 GMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTG-GYLPLAATLCTAE-IFEAF 291 (423)
T ss_pred CcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhc-CcccceEEEEcHH-HHHhh
Confidence 87764 9999999999999999999985 22211 11223333333467899954 2345888887744 54444
Q ss_pred HHH---HH-hcCC--CCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhcc
Q 021783 146 YFL---QN-AEGS--GLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 217 (307)
Q Consensus 146 ~~~---~~-~~~~--~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (307)
... .. ..++ ...+.....+.+.++.+.. ..++..+..+.+.+.+++... .+.+. ..+
T Consensus 292 ~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~-----~~~i~----------~vr 356 (423)
T PRK05964 292 YSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRD-----LPGVA----------DVR 356 (423)
T ss_pred hcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcc-----CCCeE----------Eee
Confidence 311 00 1111 2344555555555554422 233344444445544443210 11111 124
Q ss_pred CCCceEEEEeCCHH---HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CC
Q 021783 218 GAGSVLSFLTGSLA---LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----ED 290 (307)
Q Consensus 218 ~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~ 290 (307)
+.|.++.+.+.+.+ ....+.+.+..+||.+.... +.+|+++.+ +|
T Consensus 357 g~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~~----------------------------~~lR~~p~l~~t~ed 408 (423)
T PRK05964 357 VLGAIGAVELDRPVLERDGPALRAFALERGVLLRPLG----------------------------NTIYLMPPYIITAEE 408 (423)
T ss_pred cccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEecC----------------------------CEEEEeCCcccCHHH
Confidence 45777788885432 36678888888898765311 239999875 67
Q ss_pred hHHHHHHHHHHHhcC
Q 021783 291 VNDLISDLDKALRTG 305 (307)
Q Consensus 291 ~~~~i~~l~~~l~~~ 305 (307)
+|++++.|.++++++
T Consensus 409 Id~~v~~l~~al~~~ 423 (423)
T PRK05964 409 LDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHHhhC
Confidence 777777777777653
No 302
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.49 E-value=4.6e-13 Score=116.25 Aligned_cols=206 Identities=14% Similarity=0.186 Sum_probs=136.1
Q ss_pred CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC----CCCcCCccCCCccEEEeccccccccCCCce
Q 021783 59 PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM----SPVLSRPLELGADIVMHSATKFIAGHSDVM 130 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~----~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~ 130 (307)
.++.+++++..+...|...+ ++++.++|++||+++|+||+|+ +|.+.....+|+.--+.+++|.+++ |+.
T Consensus 221 ~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~--G~P 298 (447)
T COG0160 221 EEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGG--GLP 298 (447)
T ss_pred CceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEecccccC--CCc
Confidence 36889999999999999975 9999999999999999999996 5665666667754445559999964 778
Q ss_pred eEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchH
Q 021783 131 AGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 210 (307)
Q Consensus 131 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~ 210 (307)
.|.++.+++ +.. +..........-.+..+..+.+-++.++. +.+.+++..+.++++.+-.-..-.++.+.
T Consensus 299 l~avv~r~e-i~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~--e~L~~~a~~~G~~l~~~L~~l~~~~~~Ig------ 368 (447)
T COG0160 299 LSAVVGRAE-IMD-WPPGGHGGTFGGNPVACAAALAVLDVIEE--ENLLERAAELGEYLRDRLEELQEKHPLIG------ 368 (447)
T ss_pred eeEEeccHH-hcc-cCCcccCCCCCcCHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHHHHhhcCcee------
Confidence 999999865 433 22222122233445566666666665443 35556666555555433100000111111
Q ss_pred HHhhhccCCCceEEEEeC--------CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeE
Q 021783 211 LHYSQAKGAGSVLSFLTG--------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 282 (307)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i 282 (307)
+.++.|.++.+.+. +.+...++.+++.++|+.+...+. ..+.+
T Consensus 369 ----dVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~-------------------------~~nvi 419 (447)
T COG0160 369 ----DVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGP-------------------------HGNVL 419 (447)
T ss_pred ----cccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCC-------------------------CCcEE
Confidence 12667888888762 235678889999989875543221 23458
Q ss_pred EEEecc----CChHHHHHHHHHHHhcC
Q 021783 283 RISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 283 Ris~~~----~~~~~~i~~l~~~l~~~ 305 (307)
||.+.+ +++|..++.|.++|++.
T Consensus 420 Ri~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 420 RILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred EEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 888865 88899999999888754
No 303
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.48 E-value=2.3e-12 Score=114.16 Aligned_cols=249 Identities=15% Similarity=0.120 Sum_probs=145.0
Q ss_pred CCeEEEcCCCCcchHHHHhhhc------ccC---CcEEEEecCCChHHHHhhcC------CCceEEEEeCCCCCcccccc
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVT------PKT---GVVVKRVNTCDLDEVASAIG------PWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~------~~~---g~~~~~v~~~d~~~l~~~l~------~~~~~v~~~~~~n~tG~~~~ 78 (307)
+.+|+.....|.+......... +.+ .-.+..+|.+|.+++++.+. .++.+|+++......|...+
T Consensus 163 r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p 242 (442)
T TIGR03372 163 KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILP 242 (442)
T ss_pred CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccC
Confidence 4578877776666542211111 111 12245667778888777663 46789999999888898887
Q ss_pred ----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCC--ccEEEeccccccccCCC-ceeEEEEEcChhHHHHHHH
Q 021783 79 ----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELG--ADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYF 147 (307)
Q Consensus 79 ----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~--~d~~~~s~~K~~~g~~g-~~~G~~~~~~~~~~~~~~~ 147 (307)
++++.++|++||+++|+||++. .|... ....+| .|+++ ++|.+++ | ..+|.++++++ +.+.+..
T Consensus 243 ~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt--~gK~lg~--G~~Pigavv~~~~-i~~~~~~ 317 (442)
T TIGR03372 243 PEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILC--LAKALGG--GVMPIGATIATEA-VFSVLFD 317 (442)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeee--ehhhhcC--CcccceEEEecHH-HHHhhhc
Confidence 9999999999999999999994 33221 222334 56655 8999953 3 23677777744 4444421
Q ss_pred HHHhcCCC--CChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEE
Q 021783 148 LQNAEGSG--LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 225 (307)
Q Consensus 148 ~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 225 (307)
.....+++ -.+..+..+.+.++.++. +++.++++.+.+++.+.-. .+ ...+|.. ....++.|.++.+
T Consensus 318 ~~~~~~~T~~gnp~~~Aaa~a~L~~i~~--~~l~~~~~~~G~~l~~~L~--~l----~~~~~~~---i~~vRG~Gl~~gi 386 (442)
T TIGR03372 318 NPFLHTTTFGGNPLACAAALATINELLE--KNLPAQAAIKGDFLLDGFQ--QL----AAEYPDL---IIEARGKGLLMAI 386 (442)
T ss_pred cCccccCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH--HH----HHhCCCc---eEEEecceEEEEE
Confidence 11011222 245666666666665532 2334444444444332100 00 0001100 0012567889999
Q ss_pred EeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 226 LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 226 ~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
.+.+.+....+.+.+..+|+.+..... ..+.+|+++.+...++.++.+.++++
T Consensus 387 el~~~~~~~~i~~~l~~~Gvl~~~~~~-------------------------~~~~lr~~Ppl~~t~~~id~~~~~l~ 439 (442)
T TIGR03372 387 EFRDNEIGYAFAKELFQQNILVAGTLN-------------------------NAKSIRIEPPLTITIEQCALVIKAAK 439 (442)
T ss_pred EeCChHHHHHHHHHHHHCCcEEeecCC-------------------------CCCEEEEECCcccCHHHHHHHHHHHH
Confidence 996655567888888888987753211 12459999987555555555555544
No 304
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.47 E-value=2e-11 Score=103.01 Aligned_cols=134 Identities=30% Similarity=0.321 Sum_probs=111.4
Q ss_pred HHHHHHh-cC--CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCcc-ccccH
Q 021783 4 LAAVTHL-LG--TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQ-QICDI 79 (307)
Q Consensus 4 l~~~~~~-~~--~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG-~~~~~ 79 (307)
-++.++. +. +.++++|+...|+.+...++..++..|.+++..+.+|.+++++.....+..+++++|+. .| ...|+
T Consensus 151 EAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~~~~~~~gv~vQyP~~-~G~~~~d~ 229 (450)
T COG0403 151 EAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESADDGDVFGVLVQYPNT-FGIVEEDL 229 (450)
T ss_pred HHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhccccCeEEEEEecCCC-CCccchhH
Confidence 3555653 32 36899999999999999999999999999999999999999998335889999999986 67 66679
Q ss_pred HHHHHHHHHcCCEEEEeCc-cCCCCcCCccCCCccEEEecccc-----ccccCCCceeEEEEEcChhH
Q 021783 80 RKIAEMAHAHGALLLVDNS-IMSPVLSRPLELGADIVMHSATK-----FIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a-~~~~~~~~~~~~~~d~~~~s~~K-----~~~g~~g~~~G~~~~~~~~~ 141 (307)
.+|.+.+|++|.++++=.- -+.+.+..+.++|+|++++|.+. .||||. .|++.++++..
T Consensus 230 ~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGPh---ag~fA~~~~~~ 294 (450)
T COG0403 230 RALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGPH---AGYFAVKDEFK 294 (450)
T ss_pred HHHHHHHhhcCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCCCcc---eeeeeEhHhHh
Confidence 9999999999988876433 34567778999999999999998 566665 89999997643
No 305
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.47 E-value=2.3e-12 Score=114.13 Aligned_cols=216 Identities=11% Similarity=0.085 Sum_probs=129.3
Q ss_pred hHHHHhhcC-----CCceEEEEeCCCCCccccc-c---HHHHHHHHHHcCCEEEEeCccCC-CCcC---CccCCCccEEE
Q 021783 50 LDEVASAIG-----PWTKLVWVESPTNPRQQIC-D---IRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLELGADIVM 116 (307)
Q Consensus 50 ~~~l~~~l~-----~~~~~v~~~~~~n~tG~~~-~---~~~l~~~~~~~~~~li~D~a~~~-~~~~---~~~~~~~d~~~ 116 (307)
++++++.+. .++++|+++..+..+|... | +++|.++|++||+++|+||+|.. +... ....++....+
T Consensus 183 ~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi 262 (425)
T PRK07495 183 LAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADL 262 (425)
T ss_pred HHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCE
Confidence 445566652 4688999997776678554 3 99999999999999999999862 2211 22334566667
Q ss_pred eccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 021783 117 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVK 196 (307)
Q Consensus 117 ~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 196 (307)
.+++|.++ .|+++|+++++++ +.+.+...........++..+..+.+.++.+.. ..+.++++.+.+++++.-...
T Consensus 263 ~tlsK~l~--~G~pigav~~~~~-i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l 337 (425)
T PRK07495 263 TTMAKGLA--GGFPLAAVTGRAE-IMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE--EDLCERANQLGNRLKQRLASL 337 (425)
T ss_pred Eeehhhhc--CCccceEEEEcHH-HHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHHHH
Confidence 88999995 4678999999754 443332212222234455566655555554432 233344444444433221000
Q ss_pred EEecCCCCCCCchHHHhhhccCCCceEEEEeCC-------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcH
Q 021783 197 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 269 (307)
Q Consensus 197 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~ 269 (307)
.-.++.+. ..++.|.++++.+.+ .+....+.+.+..+|+.+.....
T Consensus 338 ~~~~~~i~----------~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~----------------- 390 (425)
T PRK07495 338 RETVPEIA----------DIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCGV----------------- 390 (425)
T ss_pred HhhCCCee----------eeecCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCC-----------------
Confidence 00011111 124567788888732 12355677777788887643111
Q ss_pred HHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 270 EVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 270 ~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
..+.+|+.+.+ +++++.++.|.++|+++
T Consensus 391 --------~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 391 --------HGNVIRFLAPITIQDDVFAEALDILEASILEA 422 (425)
T ss_pred --------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 12458888765 78889999999888754
No 306
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.47 E-value=4.5e-13 Score=116.29 Aligned_cols=174 Identities=20% Similarity=0.270 Sum_probs=120.0
Q ss_pred eEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC---CC---ceEEEEeCCCCCccccccHHHHHH
Q 021783 16 EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG---PW---TKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 16 ~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~---~~---~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
.|++++..|.+.. .++...|+.++.||.+ |+++|++.+. .+ +-+|+.+..++.+|.+-|+++|.+
T Consensus 143 ~i~~s~~aH~S~~----Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~ 218 (373)
T PF00282_consen 143 VIYVSEQAHYSIE----KAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIAD 218 (373)
T ss_dssp EEEEETTS-THHH----HHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHH
T ss_pred ccccccccccHHH----HhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhh
Confidence 5778888998887 7788999999999885 7788888875 12 335667788889999999999999
Q ss_pred HHHHcCCEEEEeCccCCCCc--CCcc-----CCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH-----HHHH--
Q 021783 85 MAHAHGALLLVDNSIMSPVL--SRPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY-----FLQN-- 150 (307)
Q Consensus 85 ~~~~~~~~li~D~a~~~~~~--~~~~-----~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~-----~~~~-- 150 (307)
+|+++++|+++|+||+...+ +... -..+|.++.++|||++.|.+ +|+++.+++....... .+..
T Consensus 219 i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~--~~~~l~r~~~~l~~~~~~~~~Yl~~~~ 296 (373)
T PF00282_consen 219 ICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYG--CGVLLVRDKSDLRDAFSINADYLGNDD 296 (373)
T ss_dssp HHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS---EEEEESSGGGHHGGGEEEETCTT-S-
T ss_pred hccccceeeeecccccccccccccccccccccccccccccchhhhhcCCcc--ceeEEeecccchHHHhccChhhhcccc
Confidence 99999999999999986332 2111 12589999999999988887 9999999875432111 0000
Q ss_pred --------h-----cCCC-CChhhHHHHh--hccccHHHHHHHHHHHHHHHHHHHhcCCCc
Q 021783 151 --------A-----EGSG-LAPFDCWICL--RGVKTMALRVEKQQDNAQKIAEFLASHPRV 195 (307)
Q Consensus 151 --------~-----~~~~-~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~ 195 (307)
. .++. ......|+.+ .|.+.+..+.++..+.++++.+.+++.+.+
T Consensus 297 ~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~ 357 (373)
T PF00282_consen 297 RESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRF 357 (373)
T ss_dssp SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTE
T ss_pred cccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 0 0011 1123344433 356778888899999999999999988753
No 307
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.47 E-value=1.2e-12 Score=116.52 Aligned_cols=208 Identities=15% Similarity=0.162 Sum_probs=124.6
Q ss_pred HHHHhhcC-----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccCC-CCcC---CccCC--CccEE
Q 021783 51 DEVASAIG-----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLEL--GADIV 115 (307)
Q Consensus 51 ~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~-~~~~---~~~~~--~~d~~ 115 (307)
+.+++.+. +++++|+++..+|++|.+.+ +++|.++|++||+++|+||+|.. +... ....+ ..|++
T Consensus 190 ~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDii 269 (443)
T PRK08360 190 EYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDII 269 (443)
T ss_pred HHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEE
Confidence 34555552 57899999988899998875 89999999999999999999862 2211 11122 34554
Q ss_pred EeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCC
Q 021783 116 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHP 193 (307)
Q Consensus 116 ~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~ 193 (307)
+++|.++ +|+++|+++++++ +.+.+...........++..+..+...++.+.. ..++..+....+.+.|++..
T Consensus 270 --tlsK~l~--~G~pigav~~~~~-i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~ 344 (443)
T PRK08360 270 --TLGKPLG--GGLPISATIGRAE-IMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMK 344 (443)
T ss_pred --Eeccccc--CCceeEEEEEcHH-HHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 6799995 5788999999854 444443221222233445556666666655432 12222333333333333210
Q ss_pred CccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC--------HHHHHHHHhcCCcceeecCCCCccceeecccccCCC
Q 021783 194 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHA 265 (307)
Q Consensus 194 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~ 265 (307)
. .++.+. ..++.|.++.+.+.+ ...+..+...+..+|+.+....
T Consensus 345 ~----~~~~v~----------~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------------- 396 (443)
T PRK08360 345 K----KHELIG----------DVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFS-------------- 396 (443)
T ss_pred H----hCCCee----------eeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecC--------------
Confidence 0 001111 124567788877631 1235677778888888764311
Q ss_pred CCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 266 SIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 266 ~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
.+.+|+++++ +++++.++.|.+++++
T Consensus 397 -------------~~~lr~~P~l~~t~~~id~~~~~l~~~l~~ 426 (443)
T PRK08360 397 -------------GNVLRIQPPLTIEKEVLDEGLDILEEAIED 426 (443)
T ss_pred -------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 2348998865 6777777777777754
No 308
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.47 E-value=4.6e-13 Score=118.61 Aligned_cols=210 Identities=10% Similarity=0.102 Sum_probs=127.6
Q ss_pred hHHHHhhcC-----CCceEEEEeCCCCCcccc-cc---HHHHHHHHHHcCCEEEEeCccCC-CCcC---CccCCC--ccE
Q 021783 50 LDEVASAIG-----PWTKLVWVESPTNPRQQI-CD---IRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLELG--ADI 114 (307)
Q Consensus 50 ~~~l~~~l~-----~~~~~v~~~~~~n~tG~~-~~---~~~l~~~~~~~~~~li~D~a~~~-~~~~---~~~~~~--~d~ 114 (307)
++.+++.+. +++.+|+++..+++.|.. .+ +++|.++|++||+++|.||+|.. +... ....++ .|+
T Consensus 183 ~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDi 262 (421)
T PRK06777 183 LSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDL 262 (421)
T ss_pred HHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCE
Confidence 556777663 467899999888888865 34 99999999999999999999862 2111 122233 464
Q ss_pred EEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcC
Q 021783 115 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 115 ~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~ 192 (307)
+ +++|.++ +|.++|+++++++ +.+.+............+..+..+.+.++.+.. ..++..+..+.+.+.|++.
T Consensus 263 v--~~sK~l~--~G~pigav~~~~~-i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l 337 (421)
T PRK06777 263 I--TMAKSLG--GGMPISAVVGRAE-VMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKA 337 (421)
T ss_pred E--eeehhhc--CCCceEEEEEcHH-HHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 4 6999994 5788999999854 444333222222333455666666666654422 2233333334444444432
Q ss_pred CCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-------HHHHHHHHhcCCcceeecCCCCccceeecccccCCC
Q 021783 193 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHA 265 (307)
Q Consensus 193 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~ 265 (307)
. . .++.+. ..++.|.++.+.+.. .+....+.+.+.++|+.+.++..+
T Consensus 338 ~---~-~~~~i~----------~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~------------ 391 (421)
T PRK06777 338 K---A-SCPAIV----------DIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVH------------ 391 (421)
T ss_pred H---H-hCCCeE----------EecCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCC------------
Confidence 0 0 001111 114467777766632 234566777677788987665431
Q ss_pred CCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 021783 266 SIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 303 (307)
Q Consensus 266 ~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 303 (307)
.+++|+++.+ +++++.++.|.+++.
T Consensus 392 -------------g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 392 -------------GNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred -------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 2359999964 677777787777764
No 309
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.45 E-value=8.5e-12 Score=117.40 Aligned_cols=120 Identities=26% Similarity=0.379 Sum_probs=99.4
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCE
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGAL 92 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~ 92 (307)
++++|++++..|+.+...+...++..|.+++.++ +++|++.+ ++.++++++|++ .|.+.|+++|.+++|++|.+
T Consensus 152 ~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~---~~~l~~~~--~~~~v~~q~Pn~-~G~ied~~~i~~~~h~~gal 225 (939)
T TIGR00461 152 KANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD---CSDIKKAV--DVFGCLLQYPAT-DGSILDYKQLIDALHSHKSL 225 (939)
T ss_pred CCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc---HHHHhhcC--CEEEEEEECCCC-CeEEecHHHHHHHHHHcCCE
Confidence 4589999999999999888888899999999885 45666665 578888989876 79999999999999999999
Q ss_pred EEEeCccCC-CCcCCccCCCccEEEeccccc-----cccCCCceeEEEEEcChhH
Q 021783 93 LLVDNSIMS-PVLSRPLELGADIVMHSATKF-----IAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 93 li~D~a~~~-~~~~~~~~~~~d~~~~s~~K~-----~~g~~g~~~G~~~~~~~~~ 141 (307)
++++.-... +.+..+.++|+|+++++.+++ +|||. .|++.++++..
T Consensus 226 ~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~---aG~~a~~~~l~ 277 (939)
T TIGR00461 226 VSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGGPH---AAFFAVKDEYN 277 (939)
T ss_pred EEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCCCc---eeeeeecHhhH
Confidence 999766544 445689999999999988885 34554 89999987643
No 310
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.45 E-value=4.4e-12 Score=112.70 Aligned_cols=249 Identities=17% Similarity=0.143 Sum_probs=146.5
Q ss_pred CCCeEEEcCCCCcchHHHHhhhc---------cc-CCc------EEEEecCCChHHHHhhcC---CCceEEEEeCCCCCc
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVT---------PK-TGV------VVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPR 73 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~---------~~-~g~------~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~t 73 (307)
.+++|+..++.|.+......... .. -+. ....++.+|++++++.+. .++++|+++...+.+
T Consensus 131 g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~ 210 (426)
T PRK00062 131 GRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNM 210 (426)
T ss_pred CCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCC
Confidence 36789998998888642211110 00 011 134455678999988874 478899999888889
Q ss_pred ccccc----HHHHHHHHHHcCCEEEEeCccCCCCc---CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH
Q 021783 74 QQICD----IRKIAEMAHAHGALLLVDNSIMSPVL---SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 146 (307)
Q Consensus 74 G~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~---~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~ 146 (307)
|.+.+ +++|.++|++||+++|+||+|..... .....++..--+.+++|.++ .|.++|+++++++ +.+.+.
T Consensus 211 G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pDi~~~gK~l~--~G~p~ga~~~~~~-i~~~~~ 287 (426)
T PRK00062 211 GVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPDLTTLGKIIG--GGLPVGAFGGRRE-IMEQLA 287 (426)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcchHhhhhHhh--CCCcceeeeEHHH-HHHhhc
Confidence 99987 99999999999999999999962211 11112233222467899995 4566888888744 544442
Q ss_pred HH---HHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 147 FL---QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 147 ~~---~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
.. .........+..+..+.+.++.+.. ..++..+..+.+.+.|++.. ..++.. -..++.|.
T Consensus 288 ~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~~~~~~----~~vrg~G~ 353 (426)
T PRK00062 288 PLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAA----------KKAGIP----LTVNRVGS 353 (426)
T ss_pred cCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH----------HHcCCc----eEEEEecc
Confidence 11 1112223445556666666654432 23333444444444444210 000000 00134577
Q ss_pred eEEEEeCC-------------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEE--e
Q 021783 222 VLSFLTGS-------------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS--V 286 (307)
Q Consensus 222 ~~~~~~~~-------------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis--~ 286 (307)
++.+.+.+ ...+..+.+.+..+|+.+..... +.+|++ +
T Consensus 354 ~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~---------------------------~~~~~~~~~ 406 (426)
T PRK00062 354 MFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQF---------------------------EAGFVSAAH 406 (426)
T ss_pred eEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCCc---------------------------CceeeeccC
Confidence 77777632 12356788888888997755321 013333 3
Q ss_pred ccCChHHHHHHHHHHHhcC
Q 021783 287 GIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 287 ~~~~~~~~i~~l~~~l~~~ 305 (307)
+.++++++++.|.+.++++
T Consensus 407 t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 407 TDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 4488899999998888754
No 311
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.45 E-value=6.4e-12 Score=111.57 Aligned_cols=213 Identities=14% Similarity=0.131 Sum_probs=126.0
Q ss_pred ChHHHHhhcC------CCceEEEEeCCCCCccccc----cHHHHHHHHHHcCCEEEEeCccC-C---CCcCCcc--CCCc
Q 021783 49 DLDEVASAIG------PWTKLVWVESPTNPRQQIC----DIRKIAEMAHAHGALLLVDNSIM-S---PVLSRPL--ELGA 112 (307)
Q Consensus 49 d~~~l~~~l~------~~~~~v~~~~~~n~tG~~~----~~~~l~~~~~~~~~~li~D~a~~-~---~~~~~~~--~~~~ 112 (307)
|++++++.+. +++.+|+++......|... .+++|.++|++||+++|+||+|+ . |...... ....
T Consensus 181 ~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~P 260 (425)
T PRK09264 181 TLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITP 260 (425)
T ss_pred HHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCC
Confidence 6677888774 2578999998888888755 39999999999999999999995 2 2221111 2235
Q ss_pred cEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHH---HHHHHHHHHHHHHHHHH
Q 021783 113 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA---LRVEKQQDNAQKIAEFL 189 (307)
Q Consensus 113 d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~l~~~l 189 (307)
|++ +++|.+ ++.|+++|+++++++ +. .+............+.....+.+.++.+. ...+...+..+.+.+.+
T Consensus 261 Di~--t~~K~l-~~~G~pigav~~~~~-i~-~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l 335 (425)
T PRK09264 261 DIV--TLSKSI-SGYGLPMALVLIKPE-LD-VWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERL 335 (425)
T ss_pred CEE--Eecccc-CCCccceEEEEEchh-hh-ccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 654 678999 455778899999855 32 22111111111222333333334442211 11222233333344433
Q ss_pred hcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcH
Q 021783 190 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 269 (307)
Q Consensus 190 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~ 269 (307)
++... ..|.+ . ...++.+.++++.+.+.+....+.+.+...|+.+.....
T Consensus 336 ~~l~~----------~~~~~-~--~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~----------------- 385 (425)
T PRK09264 336 EEIAA----------KYPGL-G--AEVRGRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGP----------------- 385 (425)
T ss_pred HHHHH----------hCCCc-e--ecceecccEEEEEecChHHHHHHHHHHHHCCCEEeccCC-----------------
Confidence 32110 01110 0 112446778889887766677888888888987754321
Q ss_pred HHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 021783 270 EVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 304 (307)
Q Consensus 270 ~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 304 (307)
..+.||+++. .+++++.++.|.+++++
T Consensus 386 --------~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~ 416 (425)
T PRK09264 386 --------EDEVVKLLPPLTIDEEELEEGLDILEEAVAE 416 (425)
T ss_pred --------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 1245999977 37788888888877754
No 312
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.43 E-value=1.4e-11 Score=106.67 Aligned_cols=236 Identities=19% Similarity=0.209 Sum_probs=135.9
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCE
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGAL 92 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~ 92 (307)
.+++|+++...|+.+...++..+...|++++.++.++-.... ++++.+|++++|++ .|.+.++++|.+++|++|.+
T Consensus 153 ~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d---~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal 228 (429)
T PF02347_consen 153 KRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD---DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGAL 228 (429)
T ss_dssp ---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB----STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-E
T ss_pred CCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc---ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCCE
Confidence 357999999999999988888999999999999975321111 67899999999987 79999999999999999999
Q ss_pred EEEeCcc--CCCCcCCccCCCccEEEecccccc------ccCCCceeEEEEEcChhHHHHHH------------------
Q 021783 93 LLVDNSI--MSPVLSRPLELGADIVMHSATKFI------AGHSDVMAGVLAVKGERLAKELY------------------ 146 (307)
Q Consensus 93 li~D~a~--~~~~~~~~~~~~~d~~~~s~~K~~------~g~~g~~~G~~~~~~~~~~~~~~------------------ 146 (307)
+++ .+. +.+.+..+.++|+|+++++ +|.| ||| + .|++.++++......-
T Consensus 229 ~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP-~--~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~lt 303 (429)
T PF02347_consen 229 VIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGFGGP-G--AGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLT 303 (429)
T ss_dssp EEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CCC-S-----EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE
T ss_pred EEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCCCCC-C--eeeEEEhhhhhhhCCCceecccccccccceeeec
Confidence 988 664 4566678999999999888 6644 444 3 8999999774433211
Q ss_pred ------HHHHhcC----CCCCh-----hhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHH
Q 021783 147 ------FLQNAEG----SGLAP-----FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 211 (307)
Q Consensus 147 ------~~~~~~~----~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~ 211 (307)
...+.-. ++... ...++...|-+.++..-+....++..+.+.|+... ...+.. .+
T Consensus 304 LqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~---~~~~~~---~~---- 373 (429)
T PF02347_consen 304 LQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIY---GLPFDN---PF---- 373 (429)
T ss_dssp -GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTT---BECSSS---SS----
T ss_pred cccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhc---CcccCC---CC----
Confidence 1111110 11111 12344445556666666777888888998888652 111111 10
Q ss_pred HhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCCh
Q 021783 212 HYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDV 291 (307)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~ 291 (307)
..-.+....++ ....++.+.....|+....- .++.+-+++.-...
T Consensus 374 -------f~e~v~~~~~~-~~~~~l~~~~~~~gl~~~~~---------------------------~~~~~li~~TE~~t 418 (429)
T PF02347_consen 374 -------FFEFVVVFSKD-KEVEELLKRGIEGGLNLRYP---------------------------DDGALLICVTETRT 418 (429)
T ss_dssp -------BSSEEEEESS--HHHHHHHHTT----EEEGGG----------------------------SSEEEEE--TT--
T ss_pred -------ceeeeeecCCc-HHHHHHHHHHHhcCCCcccc---------------------------CCCeEEEEccCCCC
Confidence 11222333343 44666888777777433210 13357888876666
Q ss_pred HHHHHHHHHHH
Q 021783 292 NDLISDLDKAL 302 (307)
Q Consensus 292 ~~~i~~l~~~l 302 (307)
.+.++.|.+++
T Consensus 419 ~edid~lv~~f 429 (429)
T PF02347_consen 419 KEDIDRLVEAF 429 (429)
T ss_dssp HHHHHHHHH--
T ss_pred HHHHHHHHhcC
Confidence 77777766543
No 313
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.43 E-value=4.5e-13 Score=112.20 Aligned_cols=141 Identities=26% Similarity=0.332 Sum_probs=42.7
Q ss_pred cHHHHHHHhcCCCCeEEEcCCCCcchHHH--HhhhcccCCcEEEEecCC---ChHHHHhhcCCCceEEEEeCCCCCc--c
Q 021783 2 AALAAVTHLLGTGEEIVAGDDLYGGTDRL--LSRVTPKTGVVVKRVNTC---DLDEVASAIGPWTKLVWVESPTNPR--Q 74 (307)
Q Consensus 2 aal~~~~~~~~~gd~Vlv~~~~~~~~~~~--~~~~~~~~g~~~~~v~~~---d~~~l~~~l~~~~~~v~~~~~~n~t--G 74 (307)
||+.+++.-+.+|.+|+++...-..+-.. +....+..|+++++|-.. .+++++++|+++|.+++-.|++|.. |
T Consensus 73 AAv~L~l~~la~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~G 152 (367)
T PF03841_consen 73 AAVLLALNTLAKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTNRTHLSDYEKAITENTAALLKVHTSNFRIQG 152 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34444444456799999988754433222 346788899999998764 5889999999999999888877753 3
Q ss_pred cc--ccHHHHHHHHHHcCCEEEEeCccC---------C---CCcCCccCCCccEEEeccccccccCCCceeEEEEEcChh
Q 021783 75 QI--CDIRKIAEMAHAHGALLLVDNSIM---------S---PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER 140 (307)
Q Consensus 75 ~~--~~~~~l~~~~~~~~~~li~D~a~~---------~---~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~ 140 (307)
.. .+++++.+++++|++++++|...+ . +........|+|++++|..|.++||. .|+++++++.
T Consensus 153 Ft~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ---aGiI~Gkk~l 229 (367)
T PF03841_consen 153 FTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ---AGIIVGKKEL 229 (367)
T ss_dssp --------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S----EEEEEEHHH
T ss_pred ccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC---eEEEEeCHHH
Confidence 33 479999999999999999999863 1 22224456799999999999999887 8999999775
Q ss_pred HHHHHH
Q 021783 141 LAKELY 146 (307)
Q Consensus 141 ~~~~~~ 146 (307)
+. .++
T Consensus 230 I~-~lk 234 (367)
T PF03841_consen 230 IE-KLK 234 (367)
T ss_dssp HH-HHH
T ss_pred HH-HHh
Confidence 54 444
No 314
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.42 E-value=1.2e-12 Score=116.97 Aligned_cols=205 Identities=13% Similarity=0.181 Sum_probs=120.4
Q ss_pred CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccCC-CCc---CCccCCCccEEEeccccccccCCCce
Q 021783 59 PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVL---SRPLELGADIVMHSATKFIAGHSDVM 130 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~-~~~---~~~~~~~~d~~~~s~~K~~~g~~g~~ 130 (307)
+++.+|+++..+...|.+.+ +++|.++|++||+++|+||+|.. +.. .....++...-+.|++|.++ +|++
T Consensus 218 ~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l~--~G~p 295 (451)
T PRK06918 218 ETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSLG--AGVP 295 (451)
T ss_pred CceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhhc--CCCc
Confidence 46888888877776677553 89999999999999999999862 221 12223342222558999994 5799
Q ss_pred eEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCC-CccEEecCCCCCCCch
Q 021783 131 AGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP-RVKKVNYAGLPEHPGH 209 (307)
Q Consensus 131 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~l~~~~~~ 209 (307)
+|+++++++ +.+.+...........++..+..+...++.+.. ..+.++.+.+.+.+.+.- .+.. .++.+.
T Consensus 296 ig~v~~~~~-i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~l~~l~~-~~~~~~----- 366 (451)
T PRK06918 296 ISGVIGRKE-IMDESAPGELGGTYAGSPLGCAAALAVLDIIEK--ENLNDRAIELGKVVMNRFEEMKN-KYNCIG----- 366 (451)
T ss_pred cEEEEEcHH-HHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHh-hCCCce-----
Confidence 999999855 443332222222234445556665555543321 222333333333332210 0000 001100
Q ss_pred HHHhhhccCCCceEEEEeC--------CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCe
Q 021783 210 ELHYSQAKGAGSVLSFLTG--------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDL 281 (307)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 281 (307)
..++.|.++.+.+. +.+....+.+.+..+|+.+.++..+ .++
T Consensus 367 -----~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~-------------------------~~~ 416 (451)
T PRK06918 367 -----DVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTY-------------------------GNV 416 (451)
T ss_pred -----eeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCC-------------------------CCE
Confidence 11345777776652 2344677888888899987664321 245
Q ss_pred EEEEecc----CChHHHHHHHHHHHhc
Q 021783 282 VRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 282 iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+|++++. +++++.++.|.+++++
T Consensus 417 lrl~p~l~~t~~~id~~l~~l~~~l~~ 443 (451)
T PRK06918 417 IRVLMPLVITDEQLEEGLTIIEESLQA 443 (451)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 9999864 6777788888777754
No 315
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.42 E-value=2.6e-11 Score=103.79 Aligned_cols=245 Identities=12% Similarity=0.007 Sum_probs=152.4
Q ss_pred HHHHHhcCCCCeEE-EcCCCCcchHHHHhhhcccCCcEEEEecC---------CChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 5 AAVTHLLGTGEEIV-AGDDLYGGTDRLLSRVTPKTGVVVKRVNT---------CDLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 5 ~~~~~~~~~gd~Vl-v~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
++.+.++++||+++ +...++.+... ...++.+| ++..+.. .+++++ .++++.+.|.+|+..+.+|
T Consensus 83 a~~~Nll~~g~~~~~~~~tG~fg~r~--~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETstG 157 (364)
T PRK12462 83 MIPMNFSRPGAAAPEYVTTGYWSRKA--IGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETVEG 157 (364)
T ss_pred HHHHHcCCCCCcEEEEEeCCHHHHHH--HHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCCce
Confidence 45667889999765 33443334442 35566666 3433321 133443 2335678899999999999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH---H--
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF---L-- 148 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~---~-- 148 (307)
+..+ ++.+.++.++|+|.+.+.+..+ +..++ |++.++.+|.++ |+| .++++.+++.+.+.... +
T Consensus 158 v~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~~--dvi~agsQKnlg-P~G--ltvvivs~~al~~~~~~~p~~ld 227 (364)
T PRK12462 158 LQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEAY--GMVYAHAQKNLG-PAG--VTVAIIRRALLERVPDTLPPMLD 227 (364)
T ss_pred EecC-----cccccCCCeEEEEcCchhhCCCCChHHc--cEEEeeccccCC-CCc--eEEEEECHHHHhhccccCCchhh
Confidence 9996 3333468999999999887776 66666 999999999995 899 89999998766442111 1
Q ss_pred -----HHhcC-CCCChhhHHHHhhcc-----c--cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhh
Q 021783 149 -----QNAEG-SGLAPFDCWICLRGV-----K--TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 215 (307)
Q Consensus 149 -----~~~~~-~~~~~~~~~~~~~~l-----~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 215 (307)
..... .+++....+.....+ + .++.+.++..+.++.+++.++..+.. +....+ +.
T Consensus 228 y~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~---~~~~~~---------~~ 295 (364)
T PRK12462 228 FRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEV---IDCHAH---------RA 295 (364)
T ss_pred HHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCc---ccCCCC---------hh
Confidence 11111 233333333333332 1 34555677778888888888876522 111110 01
Q ss_pred ccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec----cCCh
Q 021783 216 AKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDV 291 (307)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~ 291 (307)
.| .-..+.|++.+.+...+|+++++.+|+..--|+- .-+.+|+|.= .+++
T Consensus 296 ~R-S~mnv~f~~~~~~l~~~f~~~a~~~gl~~lkGhr-------------------------~vgg~Ras~yna~~~e~v 349 (364)
T PRK12462 296 AR-STMNVAFRFRQPRLDTLFKEQSTEAGFCGLSGHR-------------------------SIGGIRASLYNAVSEQAV 349 (364)
T ss_pred hc-CcceEEEEcCCHHHHHHHHHHHHHCCCccccCCc-------------------------ccCceEEEcCCCCCHHHH
Confidence 11 1245677887777789999999999886554442 1233999983 3566
Q ss_pred HHHHHHHHHHH
Q 021783 292 NDLISDLDKAL 302 (307)
Q Consensus 292 ~~~i~~l~~~l 302 (307)
+.+++.++++-
T Consensus 350 ~~L~~fm~~f~ 360 (364)
T PRK12462 350 SRLCAFLKDFA 360 (364)
T ss_pred HHHHHHHHHHH
Confidence 66666655543
No 316
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.41 E-value=4.2e-11 Score=99.47 Aligned_cols=145 Identities=23% Similarity=0.361 Sum_probs=94.0
Q ss_pred HH-HHHHHhcCCCCeEE-EcCCCCcchHHHHh------hhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEe-C
Q 021783 3 AL-AAVTHLLGTGEEIV-AGDDLYGGTDRLLS------RVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVE-S 68 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vl-v~~~~~~~~~~~~~------~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~-~ 68 (307)
|| .++..+++|||+.+ ++...|......+. .-++.+|++...+|+. |.+.++++++++||+|+++ +
T Consensus 84 Ai~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRS 163 (403)
T PF06838_consen 84 AIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRS 163 (403)
T ss_dssp HHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S
T ss_pred HHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhccCceEEEEecC
Confidence 45 46677899999998 56666766664442 2235678999999973 8999999999999999998 3
Q ss_pred CCC---CccccccHHHHHHHHHHc--CCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 69 PTN---PRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 69 ~~n---~tG~~~~~~~l~~~~~~~--~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
-.. |+=.+.+++++.+++|+. ++++++|++|+...-. .+.+.|+|++.+|+-|..+|.-.--+|+++++++.+.
T Consensus 164 rGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe 243 (403)
T PF06838_consen 164 RGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVE 243 (403)
T ss_dssp -TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCccccchhheeccceeCCCCCccCcCCEEechHHHHH
Confidence 322 222223467777777776 7999999999988755 8888999999999999886532223899999977665
Q ss_pred HHHHH
Q 021783 143 KELYF 147 (307)
Q Consensus 143 ~~~~~ 147 (307)
.....
T Consensus 244 ~~a~R 248 (403)
T PF06838_consen 244 RAAYR 248 (403)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 54443
No 317
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.40 E-value=2.5e-11 Score=105.00 Aligned_cols=234 Identities=14% Similarity=0.148 Sum_probs=146.1
Q ss_pred CCeEEEcCCCCcchHHHHhhhc----ccCC-----cEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccc-c---HH
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVT----PKTG-----VVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC-D---IR 80 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~----~~~g-----~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~-~---~~ 80 (307)
.++|+....+|.+.....-... ...+ ..+..++.+|++++++.+.+++++|++++.+...|... | ++
T Consensus 107 r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~aAvivEpi~g~gG~~~~~~~yl~ 186 (364)
T PRK04013 107 RKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEAITKETAAVIFEPIQGEGGIVPAKEEFVK 186 (364)
T ss_pred CCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHHHhcCCcEEEEEcCCcCCCCCcCCCHHHHH
Confidence 3889988887777642211110 0011 23455667789999999988999999998888777665 4 99
Q ss_pred HHHHHHHHcCCEEEEeCccC---CCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCC
Q 021783 81 KIAEMAHAHGALLLVDNSIM---SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 157 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~---~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (307)
++.++|++||+++|.||++. .|.+.....++..--+.+++|.+++ |+.+|.++.+++. .. ..........
T Consensus 187 ~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~~gK~lgg--G~P~~a~~~~~~~-~~----~~~~~T~~gn 259 (364)
T PRK04013 187 TLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTMGKGIGN--GVPVSLTLTNFDV-ER----GKHGSTFGGN 259 (364)
T ss_pred HHHHHHHHcCCEEEEechhhcCCCCchhHHHhcCCCCCEEEecccccC--CceeEEEEecccc-cC----CCcCCCCCcC
Confidence 99999999999999999986 2332222233433334447999964 5667888877552 11 1112223344
Q ss_pred hhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHH
Q 021783 158 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVV 237 (307)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (307)
+..+..+.+.++.++. +++.++++++ +++.. .+.+ ...++.|.++.+.+... ...+.
T Consensus 260 p~~~aaa~a~l~~i~~--~~l~~~~~~~---l~~l~------~~~v----------~~vRG~Gl~~gve~~~~--~~~i~ 316 (364)
T PRK04013 260 PLACKAVAVTLRILRR--ERLVEKAGEK---FIEIK------GERV----------VTTRGRGLMIGIVLKKP--VGKYV 316 (364)
T ss_pred HHHHHHHHHHHHHHHh--ccHHHHHHHH---HHHhc------cCcc----------eeeeeCcEEEEEEeCCc--HHHHH
Confidence 5666666666665533 2334444433 22111 0111 12366788999988542 45677
Q ss_pred hcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 238 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 238 ~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+.+..+|+.+.... .+.+|+.+.+ +++++.++.|.+++++
T Consensus 317 ~~~~~~Gll~~~~g---------------------------~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 317 EELQNRGYLVHTAG---------------------------QRVIRLLPPLIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred HHHHhCCcEEeeCC---------------------------CCEEEEeCCcccCHHHHHHHHHHHHHHHHH
Confidence 77777888664311 2348888864 7888888888888865
No 318
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.37 E-value=1.4e-10 Score=106.64 Aligned_cols=136 Identities=13% Similarity=0.141 Sum_probs=101.4
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----------Ch-----HHHHhhcC--C---Cce
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----------DL-----DEVASAIG--P---WTK 62 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----------d~-----~~l~~~l~--~---~~~ 62 (307)
+.+++++.+++||.||++..+|-|.. ..+...|+++++++.. ++ +.+++.+. + +++
T Consensus 224 n~av~~a~~~~Gd~VLvdRN~HKSv~----~aLilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~ 299 (713)
T PRK15399 224 NKIVGMYAAPAGSTLLIDRNCHKSLA----HLLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPV 299 (713)
T ss_pred HHHHHHHhcCCCCEEEeecccHHHHH----HHHHHcCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCce
Confidence 34788889999999999999999988 5678899999998752 33 88888886 2 336
Q ss_pred EEEEeCCCCCccccccHHHHHHHHHHcCCEE-EEeCccCC-----CCcC--CccCC--CccEE---EeccccccccCCCc
Q 021783 63 LVWVESPTNPRQQICDIRKIAEMAHAHGALL-LVDNSIMS-----PVLS--RPLEL--GADIV---MHSATKFIAGHSDV 129 (307)
Q Consensus 63 ~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~l-i~D~a~~~-----~~~~--~~~~~--~~d~~---~~s~~K~~~g~~g~ 129 (307)
++++++|+. .|.+.|+++|.+.| |+.+ ++|+||+. +.++ .+... +.|.+ +.|.||.+.+.+-
T Consensus 300 ~vvit~pTY-dGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQ- 374 (713)
T PRK15399 300 HAVITNSTY-DGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQ- 374 (713)
T ss_pred EEEEECCCC-CceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccch-
Confidence 899999866 79999999999998 6766 69999862 1122 11112 46766 9999999987765
Q ss_pred eeEEEEEcChhHHHHHHHH
Q 021783 130 MAGVLAVKGERLAKELYFL 148 (307)
Q Consensus 130 ~~G~~~~~~~~~~~~~~~~ 148 (307)
+.++.++.....+.+...
T Consensus 375 -aS~iHvk~~vd~~~~n~a 392 (713)
T PRK15399 375 -ASLIHIKGEYDEETFNEA 392 (713)
T ss_pred -heeeeecCCCCHHHHHHH
Confidence 888888764333344433
No 319
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.37 E-value=1.5e-11 Score=105.23 Aligned_cols=232 Identities=17% Similarity=0.195 Sum_probs=138.6
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcc----------cCC------cEEEEecCCChHHHHhhcC---CCceE
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP----------KTG------VVVKRVNTCDLDEVASAIG---PWTKL 63 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~----------~~g------~~~~~v~~~d~~~l~~~l~---~~~~~ 63 (307)
|+-+..++.+ .|+|+..+.+|....-.+..-+. ..| ..+..+|.+|++.+++++. ++..+
T Consensus 125 AiRlARa~Tg-R~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAa 203 (432)
T COG0001 125 AIRLARAYTG-RDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAA 203 (432)
T ss_pred HHHHHHHhhC-CCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEE
Confidence 3333334444 67888777777766543322111 111 3455667789999999987 47899
Q ss_pred EEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccCCCCcC---CccCCCccEEEeccccccccCCCceeEEEEE
Q 021783 64 VWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAV 136 (307)
Q Consensus 64 v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~ 136 (307)
|+++.+....|.+.| +++|.++|++||+++|.||+....... .-..+|..--+.++.|.++ .|+.+|++.+
T Consensus 204 VIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlGKiIG--GGlP~ga~gG 281 (432)
T COG0001 204 VIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLGKIIG--GGLPIGAFGG 281 (432)
T ss_pred EEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhhhhhhhc--CCcceeeecc
Confidence 999977666788876 999999999999999999998633322 2233466666677999996 3777999998
Q ss_pred cChhHHHHHHHHH-HhcCCCC--ChhhHHHHhhccccHHH---HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchH
Q 021783 137 KGERLAKELYFLQ-NAEGSGL--APFDCWICLRGVKTMAL---RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 210 (307)
Q Consensus 137 ~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~l~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~ 210 (307)
+++ +.+.+.... -+...++ .+.........++.+.. ..+++.+...+|.+.|++.-. . .+++ .
T Consensus 282 r~e-iM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~--~---~g~~---~-- 350 (432)
T COG0001 282 RAE-IMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAE--R---HGIP---L-- 350 (432)
T ss_pred HHH-HHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH--H---hCCC---e--
Confidence 855 544332222 1111222 23333344444444432 355556666666665553310 0 0000 0
Q ss_pred HHhhhccCCCceEEEEeCC-------------HHHHHHHHhcCCcceeecCCCCc
Q 021783 211 LHYSQAKGAGSVLSFLTGS-------------LALSKHVVETTKYFSITVSFGSV 252 (307)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~~gi~v~~g~~ 252 (307)
..+..++++.+.+.+ .+....++..+..+||...++.+
T Consensus 351 ----~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~ 401 (432)
T COG0001 351 ----TVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQF 401 (432)
T ss_pred ----EEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCccc
Confidence 012346677776632 22355566677778998877653
No 320
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.37 E-value=5.6e-12 Score=112.49 Aligned_cols=209 Identities=14% Similarity=0.178 Sum_probs=124.9
Q ss_pred HHhhcC-CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc---CCccCCC--ccEEEecccc
Q 021783 53 VASAIG-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL---SRPLELG--ADIVMHSATK 121 (307)
Q Consensus 53 l~~~l~-~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~~~~~--~d~~~~s~~K 121 (307)
+++.+. +++++|+++..+...|...+ +++|.++|++||+++|.||++. .+.. .....+| .|+++ ++|
T Consensus 211 l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~--~gK 288 (443)
T PRK06058 211 IEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLIT--TAK 288 (443)
T ss_pred HHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEE--Ecc
Confidence 444443 57888998877776677654 9999999999999999999986 2221 1112233 46665 579
Q ss_pred ccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCC-CccEEec
Q 021783 122 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP-RVKKVNY 200 (307)
Q Consensus 122 ~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~ 200 (307)
.++ .|..+|+++++++ +.+.+............+..+..+.+.++.+.. +++.++...+.+++.+.- .+.. .+
T Consensus 289 ~l~--~G~Pi~av~~~~~-i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~~l~~-~~ 362 (443)
T PRK06058 289 GIA--GGLPLSAVTGRAE-IMDAPHPGGLGGTYGGNPVACAAALAAIETIEE--DDLVARARQIEALMTDRLRALAA-ED 362 (443)
T ss_pred ccc--CCCccEEEEEcHH-HHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHh-hC
Confidence 995 4678999999854 444333222222334455666666666655432 233344444333333210 0000 00
Q ss_pred CCCCCCCchHHHhhhccCCCceEEEEeCC-------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHH
Q 021783 201 AGLPEHPGHELHYSQAKGAGSVLSFLTGS-------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 273 (307)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~ 273 (307)
+.+. ..++.|.++.+.+.+ .+....+.+.+.++|+.+..+..+
T Consensus 363 ~~i~----------~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~-------------------- 412 (443)
T PRK06058 363 DRIG----------DVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTY-------------------- 412 (443)
T ss_pred CcEE----------eeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCC--------------------
Confidence 1100 124567788887732 234667788888889987653321
Q ss_pred hcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 274 ARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 274 ~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
.+.+|+.+.+ +++++.++.|.+++++
T Consensus 413 -----~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 413 -----GNVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred -----CCEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 2358998765 7888888888888765
No 321
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.37 E-value=9.2e-12 Score=105.25 Aligned_cols=123 Identities=28% Similarity=0.331 Sum_probs=95.8
Q ss_pred cCCCCeEEEcCC-----CCcchHHHHhhhcccCCcEEEEecCC---ChHHHHhhcCCCceEEEEeCCCCCcccc--ccHH
Q 021783 11 LGTGEEIVAGDD-----LYGGTDRLLSRVTPKTGVVVKRVNTC---DLDEVASAIGPWTKLVWVESPTNPRQQI--CDIR 80 (307)
Q Consensus 11 ~~~gd~Vlv~~~-----~~~~~~~~~~~~~~~~g~~~~~v~~~---d~~~l~~~l~~~~~~v~~~~~~n~tG~~--~~~~ 80 (307)
+.++.+|+++-. .++... ..++..|++++++... ...+++.+|+++|++++-.+.+|. |.. .+.+
T Consensus 103 l~~~~EvVis~g~lV~gg~~~v~----d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~ta~llkV~s~~~-~f~~~l~~~ 177 (395)
T COG1921 103 LAEGKEVVVSRGELVEGGAFRVP----DIIRLAGAKLVEVGTTNRTHLKDYELAINENTALLLKVHSSNY-GFTGMLSEE 177 (395)
T ss_pred hccCCeEEEEccccccCCCCChh----HHHHHcCCEEEEecccCcCCHHHHHHHhccCCeeEEEEeeccc-cccccccHH
Confidence 444666665543 333444 8889999999999864 789999999999998887665553 544 4688
Q ss_pred HHHHHHHHcCCEEEEeCccCCCC-----cCCccCCCccEEEeccccccccCCCceeEEEEEcChhH
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPV-----LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
++.++||++|+++++|.+.+... .......|+|++++|..|.++||. +|+++++++.+
T Consensus 178 ~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPq---aGii~GkKelI 240 (395)
T COG1921 178 ELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQ---AGIIVGKKELI 240 (395)
T ss_pred HHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCCc---cceEechHHHH
Confidence 89999999999999999986542 224446699999999999999887 89999997765
No 322
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.36 E-value=1.9e-11 Score=108.87 Aligned_cols=202 Identities=10% Similarity=0.130 Sum_probs=119.1
Q ss_pred CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCCccEEEeccccccccCCCce
Q 021783 59 PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELGADIVMHSATKFIAGHSDVM 130 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~~d~~~~s~~K~~~g~~g~~ 130 (307)
+++.+|+++.+++..|...+ +++|.++|++||+++|.||+|. .|... ....+|..--+.+++|.++ .|..
T Consensus 206 ~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~gK~l~--~G~p 283 (445)
T PRK08593 206 DEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFGKSLA--GGMP 283 (445)
T ss_pred CceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeeccccc--CCcc
Confidence 57899999999888888865 9999999999999999999984 33221 1122343223446899995 3566
Q ss_pred eEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc
Q 021783 131 AGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 208 (307)
Q Consensus 131 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 208 (307)
+|+++++++ +.+.+............+..+..+.+.++.++. ..++..+..+.+.+.|++... .++.+.
T Consensus 284 ~gav~~~~~-i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~v~---- 354 (445)
T PRK08593 284 MSAIVGRKE-IMESLEAPAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVS----KYNFVG---- 354 (445)
T ss_pred cEEEEEcHH-HHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh----cCCcEE----
Confidence 899998854 444443111112233445556656666654432 122333333334444432100 001110
Q ss_pred hHHHhhhccCCCceEEEEeC--------CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCC
Q 021783 209 HELHYSQAKGAGSVLSFLTG--------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTED 280 (307)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 280 (307)
..++.|.++.+.+. +...+..+...+..+|+.+.... .+
T Consensus 355 ------~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~---------------------------~~ 401 (445)
T PRK08593 355 ------DVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVA---------------------------GN 401 (445)
T ss_pred ------EEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccC---------------------------CC
Confidence 11455666666652 22345678888888888664311 13
Q ss_pred eEEEEecc----CChHHHHHHHHHHHhc
Q 021783 281 LVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 281 ~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
.+|+++.+ ++++..++.|.+++++
T Consensus 402 ~lr~~p~l~~t~~~id~~~~~l~~~l~~ 429 (445)
T PRK08593 402 VLRFQPPLVITYEQLDTALNTIEQAFTA 429 (445)
T ss_pred EEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 48888876 6777777777777654
No 323
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.35 E-value=5.3e-13 Score=111.46 Aligned_cols=188 Identities=23% Similarity=0.225 Sum_probs=123.0
Q ss_pred cHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC------CCceEEEEeCCC
Q 021783 2 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG------PWTKLVWVESPT 70 (307)
Q Consensus 2 aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~------~~~~~v~~~~~~ 70 (307)
|...++.++++|++.|++.++.|...... .......|++++.++.. |+++|++.+. +++++|++++++
T Consensus 56 An~~al~~~~~~~~~vi~~~~aHi~~~E~-ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~ 134 (290)
T PF01212_consen 56 ANQLALRAHLRPGESVICADTAHIHFDET-GAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTT 134 (290)
T ss_dssp HHHHHHHHHHHTTEEEEEETTEHHHHSST-THHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSB
T ss_pred HHHHHHHHHHhcCCceeccccceeeeecc-chhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecC
Confidence 45567777789999999999877533321 12234589999998864 6899998886 368999999998
Q ss_pred CCc-ccccc---HHHHHHHHHHcCCEEEEeCccC---C---CCcCCccCCCccEEEeccccccccCCCceeEEEEEcChh
Q 021783 71 NPR-QQICD---IRKIAEMAHAHGALLLVDNSIM---S---PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER 140 (307)
Q Consensus 71 n~t-G~~~~---~~~l~~~~~~~~~~li~D~a~~---~---~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~ 140 (307)
|.. |.+++ +++|.++|++||++++.|++-- . +....-...++|.+..|++|.++.+ + +++++.+++.
T Consensus 135 ~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~-~--Gavl~~~~~~ 211 (290)
T PF01212_consen 135 ELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAP-G--GAVLAGNKEF 211 (290)
T ss_dssp TTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SS-S--EEEEEESHHH
T ss_pred cCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccc-c--ceEEEechHH
Confidence 853 76664 8899999999999999999942 1 2212122247999999999999554 3 7888888775
Q ss_pred HHHHHHHHHHhcCC-CCChhhHH------HHhhccccHHHHHHHHHHHHHHHHHHHhcCC
Q 021783 141 LAKELYFLQNAEGS-GLAPFDCW------ICLRGVKTMALRVEKQQDNAQKIAEFLASHP 193 (307)
Q Consensus 141 ~~~~~~~~~~~~~~-~~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~ 193 (307)
+.+.........+. ........ ....+++....+..+-.++++++.+.++..+
T Consensus 212 i~~~~~~~k~~gg~~~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~~ 271 (290)
T PF01212_consen 212 IAKARRQRKRLGGGMRQAGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEALG 271 (290)
T ss_dssp HHHHHHHHHHHTHHHHHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEEC
T ss_pred HHHHHHHHHHhccCeeecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHCC
Confidence 65544443322221 11112222 3444455545556666778888888887654
No 324
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.34 E-value=6e-11 Score=98.95 Aligned_cols=123 Identities=17% Similarity=0.210 Sum_probs=89.0
Q ss_pred HhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcC--CCceEEEEe-CCCCCcccccc
Q 021783 9 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG--PWTKLVWVE-SPTNPRQQICD 78 (307)
Q Consensus 9 ~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~--~~~~~v~~~-~~~n~tG~~~~ 78 (307)
+...|..+|.+|+|+|+.+. .+....|.++...|.- |.+.+.+.++ +...+|++- ..|||||.-++
T Consensus 115 ~~~~~~~~vwis~PtW~NH~----~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t 190 (396)
T COG1448 115 ARFFPDATVWISDPTWPNHK----AIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPT 190 (396)
T ss_pred HHhCCCceEEeCCCCcHhHH----HHHHhcCCceeeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCC
Confidence 34567888999999999888 5566789999888862 6777777765 333445444 56999999986
Q ss_pred ---HHHHHHHHHHcCCEEEEeCccC---CCCcCCcc------CCC-ccEEEeccccccccCCCceeEEEEE
Q 021783 79 ---IRKIAEMAHAHGALLLVDNSIM---SPVLSRPL------ELG-ADIVMHSATKFIAGHSDVMAGVLAV 136 (307)
Q Consensus 79 ---~~~l~~~~~~~~~~li~D~a~~---~~~~~~~~------~~~-~d~~~~s~~K~~~g~~g~~~G~~~~ 136 (307)
-++|.++.++.+.+.+.|-||- .|...+.. ..+ --+++.|+||.| |.-|-|.|++..
T Consensus 191 ~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnf-gLYgERVGa~~v 260 (396)
T COG1448 191 EEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNF-GLYGERVGALSV 260 (396)
T ss_pred HHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhh-hhhhhccceeEE
Confidence 5678888899999999999983 33221211 112 269999999999 566777775443
No 325
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.31 E-value=1.2e-10 Score=102.95 Aligned_cols=128 Identities=27% Similarity=0.367 Sum_probs=104.1
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----------ChHHHHhhcC--CCc-eEEEEeCC
Q 021783 4 LAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----------DLDEVASAIG--PWT-KLVWVESP 69 (307)
Q Consensus 4 l~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----------d~~~l~~~l~--~~~-~~v~~~~~ 69 (307)
.+++++++++||.||++.++|-|.. ..+-..|+.++++... +.+.+++++. +.. |++++++|
T Consensus 100 k~vi~a~~~~GD~VLvdRN~HKSi~----~glilaGa~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnp 175 (557)
T COG1982 100 KAVINAVLTPGDKVLVDRNCHKSIH----HGLILAGATPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNP 175 (557)
T ss_pred HHHHHhhcCCCCEEEecCCccHHHH----HHHHHcCCceEEecCCCCccccccCCCCHHHHHHHHHhChhhheeEEEecC
Confidence 3788899999999999999998887 5567789999998752 6788888765 445 88999988
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCccCC-----CCcCC-ccCCCccEEEeccccccccCCCceeEEEEEcC
Q 021783 70 TNPRQQICDIRKIAEMAHAHGALLLVDNSIMS-----PVLSR-PLELGADIVMHSATKFIAGHSDVMAGVLAVKG 138 (307)
Q Consensus 70 ~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~-----~~~~~-~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~ 138 (307)
+. .|.+++.++|.+.++++++|+.+|+++.. +..+. ....+.|+++.|+||.+++.+ .+.++..++
T Consensus 176 TY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~tqS~HK~l~alS--QaS~iHv~~ 247 (557)
T COG1982 176 TY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADFVTQSTHKLLAALS--QASMIHVKD 247 (557)
T ss_pred cc-ceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceEEEechhhhhhhhh--hhHHHhhCC
Confidence 77 79999999999999999999999999863 22232 333589999999999986554 477777775
No 326
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.31 E-value=4.4e-11 Score=106.65 Aligned_cols=202 Identities=15% Similarity=0.145 Sum_probs=119.7
Q ss_pred CCceEEEEeCCCCCccccc-c---HHHHHHHHHHcCCEEEEeCccC-CCC---cCCccCCC--ccEEEeccccccccCCC
Q 021783 59 PWTKLVWVESPTNPRQQIC-D---IRKIAEMAHAHGALLLVDNSIM-SPV---LSRPLELG--ADIVMHSATKFIAGHSD 128 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~-~---~~~l~~~~~~~~~~li~D~a~~-~~~---~~~~~~~~--~d~~~~s~~K~~~g~~g 128 (307)
.++++++++.+++..|... | ++++.++|++||+++|.||++. .|. ......+| .|+++ ++|.+++ |
T Consensus 205 ~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~--G 280 (442)
T TIGR00709 205 DKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--MSKAVGG--G 280 (442)
T ss_pred CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--EcccccC--C
Confidence 4678899998877777765 3 9999999999999999999986 222 21222233 46666 8999954 6
Q ss_pred ceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCC-CccEEecCCCCCCC
Q 021783 129 VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP-RVKKVNYAGLPEHP 207 (307)
Q Consensus 129 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~l~~~~ 207 (307)
.++|+++++++ . ..+............+..+..+.+.++.+.. +.+.++++.+.+++.+.- .+ .-.++.+.
T Consensus 281 ~Pigav~~~~~-~-~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~L~~l-~~~~~~v~--- 352 (442)
T TIGR00709 281 LPLAVLLIAPE-F-DAWQPAGHTGTFRGNQLAMVTGTEALNYWKD--DNLAQNAQERGERITSFLDDM-IKEHPCIG--- 352 (442)
T ss_pred cccEEEEEchH-H-hccCCCcCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHH-HHhCCCee---
Confidence 78999999865 3 2221111112233455666666666655432 233344444444333210 00 00011111
Q ss_pred chHHHhhhccCCCceEEEEeCCH--------------HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHH
Q 021783 208 GHELHYSQAKGAGSVLSFLTGSL--------------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 273 (307)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~ 273 (307)
..++.|.++.+.+... +....+...+..+|+.+.....
T Consensus 353 -------~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~--------------------- 404 (442)
T TIGR00709 353 -------NVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGR--------------------- 404 (442)
T ss_pred -------eeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCC---------------------
Confidence 1256678888877321 1355677777778887653221
Q ss_pred hcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 274 ARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 274 ~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
..+.+|+.+.+ +++++.++.|.++|++
T Consensus 405 ----~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 405 ----EGEVFRLLCPITIDQEECEEGISRFKQAVEE 435 (442)
T ss_pred ----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 12448888875 7777777888777753
No 327
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.29 E-value=2.2e-11 Score=102.75 Aligned_cols=110 Identities=21% Similarity=0.290 Sum_probs=96.5
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccc-cHHHHHHHHH
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQIC-DIRKIAEMAH 87 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~-~~~~l~~~~~ 87 (307)
.++||+++-.|+... .-+.-.|.+|+.|+.+ |+++|++.+.+++.++++++|++ .|..- ++.+|+++.|
T Consensus 157 R~~~LIP~SAHGTNP----ASAam~G~~VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT-~GvFE~~I~ei~~ivH 231 (496)
T COG1003 157 RNICLIPDSAHGTNP----ASAAMAGFKVVVVKCDENGNVDLDDLRAKAEDNLAALMITNPST-LGVFEEDIREICEIVH 231 (496)
T ss_pred CcEEEeeccccCCCh----hhHhhcCceEEEEecCCCCCccHHHHHHHhccceeEEEeccCcc-cccchhhHHHHHHHHH
Confidence 468999999999888 6678899999999985 99999999999999999999987 57765 6999999999
Q ss_pred HcCCEEEEeCccCCCCc--CCccCCCccEEEeccccccccCCC
Q 021783 88 AHGALLLVDNSIMSPVL--SRPLELGADIVMHSATKFIAGHSD 128 (307)
Q Consensus 88 ~~~~~li~D~a~~~~~~--~~~~~~~~d~~~~s~~K~~~g~~g 128 (307)
++|..+..|+|.....+ ..+.++|.|++-..+||+|+.|.|
T Consensus 232 ~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNLHKTF~iPHG 274 (496)
T COG1003 232 EAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNLHKTFCIPHG 274 (496)
T ss_pred HcCCEEEecCcchhhhhccccccccccceEEeecccccccCCC
Confidence 99999999999865443 378889999999999999976655
No 328
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.28 E-value=6.4e-11 Score=104.78 Aligned_cols=207 Identities=12% Similarity=0.128 Sum_probs=123.1
Q ss_pred HHHHhhcCCCceEEEEeCC-CCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc---CCccCCC--ccEEEecc
Q 021783 51 DEVASAIGPWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL---SRPLELG--ADIVMHSA 119 (307)
Q Consensus 51 ~~l~~~l~~~~~~v~~~~~-~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~~~~~--~d~~~~s~ 119 (307)
+.+++.+..++.+|+++.. +...|...+ +++|.++|++||+++|+||++. .|.. .....+| .|++ ++
T Consensus 191 ~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~--t~ 268 (422)
T PRK05630 191 RSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIM--CV 268 (422)
T ss_pred HHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCee--ee
Confidence 3455555568899999984 776777653 9999999999999999999984 2221 1112234 4565 68
Q ss_pred ccccccCCC-ceeEEEEEcChhHHHHHHHH------HHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcC
Q 021783 120 TKFIAGHSD-VMAGVLAVKGERLAKELYFL------QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 120 ~K~~~g~~g-~~~G~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
+|.++| | ..+|+++++++ +.+.+... .........+..+..+...++.+.. +...++...+.+++++.
T Consensus 269 gK~l~g--G~~p~~av~~~~~-i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~--~~~~~~~~~~g~~l~~~ 343 (422)
T PRK05630 269 GKALTG--GFMSFAATLCTDK-VAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET--GMWRKQVKRIEAELIAG 343 (422)
T ss_pred echhhc--CccccceeeccHH-HHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHHHH
Confidence 999954 2 12788888754 44444311 1112233445666666666655532 12233444444433321
Q ss_pred C-CccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHH
Q 021783 193 P-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEV 271 (307)
Q Consensus 193 ~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~ 271 (307)
- .+.. ++.+. ..++.|.++.+.+.+......+.+.+.++|+.+....
T Consensus 344 L~~l~~--~~~v~----------~vRg~Gl~~~ie~~~~~~~~~~~~~~~~~Gl~~~~~g-------------------- 391 (422)
T PRK05630 344 LSPLAH--LPGVA----------DVRVLGAIGVVEMEQPVDMEEATQAAVDHGVWLRPFG-------------------- 391 (422)
T ss_pred HHHhhc--CCCee----------eeeccccEEEEEECCcccHHHHHHHHHHCCeEEEecC--------------------
Confidence 0 0000 11111 2266788999988644335677777888888764311
Q ss_pred HHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 272 RQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 272 ~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+.+|+.+.+ +++|+.++.|.++|++
T Consensus 392 --------~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 392 --------RLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred --------CEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 237888865 7777788888777753
No 329
>PRK06541 hypothetical protein; Provisional
Probab=99.28 E-value=8.5e-11 Score=105.08 Aligned_cols=209 Identities=15% Similarity=0.158 Sum_probs=123.5
Q ss_pred HHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCcc-CCCCcCC---ccCCC--ccEEE
Q 021783 51 DEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSI-MSPVLSR---PLELG--ADIVM 116 (307)
Q Consensus 51 ~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~-~~~~~~~---~~~~~--~d~~~ 116 (307)
+.+++.+. .++.+|+++..+++.|.+.+ +++|.++|++||+++|.||+| +.|.... ...+| .|++
T Consensus 208 ~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDiv- 286 (460)
T PRK06541 208 DRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDII- 286 (460)
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEE-
Confidence 56777664 45778888888999999887 999999999999999999999 4443221 22233 5666
Q ss_pred eccccccccCCCc-eeEEEEEcChhHHHHHHHH-HH---hcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHH
Q 021783 117 HSATKFIAGHSDV-MAGVLAVKGERLAKELYFL-QN---AEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFL 189 (307)
Q Consensus 117 ~s~~K~~~g~~g~-~~G~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l 189 (307)
+++|.+++ |. ..|+++++++.. +.+... .. .......+.....+.+.++.+.. ..++..+..+.+.+.|
T Consensus 287 -t~gK~l~~--G~~pigav~~~~~i~-~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L 362 (460)
T PRK06541 287 -TCAKGITS--GYSPLGAMIASDRLF-EPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATL 362 (460)
T ss_pred -EecccccC--CccceeEEEEcHHHH-HHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 48999953 43 478888875543 333211 11 11223344556666655554422 1233344444444444
Q ss_pred hcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH---------H-----HHHHHHhcCCcceeecCCCCccce
Q 021783 190 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL---------A-----LSKHVVETTKYFSITVSFGSVKSL 255 (307)
Q Consensus 190 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-----~~~~~~~~l~~~gi~v~~g~~~~~ 255 (307)
++.. . .+.+ ...++.|.++.+.+... + ....+.+.+.++|+.+.....
T Consensus 363 ~~l~---~--~~~v----------~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--- 424 (460)
T PRK06541 363 EKLL---D--LPIV----------GDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDR--- 424 (460)
T ss_pred HHhh---c--CCCe----------EEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecCC---
Confidence 4321 0 1100 01245677888876211 0 012456677778887654211
Q ss_pred eecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 256 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+.+.+|+++.+ +++++.++.|.+++++
T Consensus 425 ----------------------g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 425 ----------------------GDPVVQLAPPLISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred ----------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 12459999975 6777777888777754
No 330
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.27 E-value=3.1e-11 Score=108.70 Aligned_cols=211 Identities=18% Similarity=0.162 Sum_probs=126.5
Q ss_pred HHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCcc-CCCCcC---CccCCCccEEEec
Q 021783 51 DEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSI-MSPVLS---RPLELGADIVMHS 118 (307)
Q Consensus 51 ~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~-~~~~~~---~~~~~~~d~~~~s 118 (307)
+++++.+. +++.+|+++......|.+.+ +++|.++|++||+++|.||++ +.|... ....+|...-+.+
T Consensus 247 ~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivt 326 (504)
T PLN02760 247 DNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVS 326 (504)
T ss_pred HHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEE
Confidence 34666552 46789999998888898887 999999999999999999999 444432 2233444333566
Q ss_pred cccccccCCCceeEEEEEcChhHHHHHHHH-------HHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhc
Q 021783 119 ATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLAS 191 (307)
Q Consensus 119 ~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~ 191 (307)
++|.+++- .+.+|.++++++ +.+.+... ......+..+..+..+.+.++.++. +.+.++.+.+.++|+.
T Consensus 327 lgK~lggG-~~PigAv~~~~~-i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~--~~l~~~~~~~g~~l~~ 402 (504)
T PLN02760 327 LAKALSSA-YMPIGAVLVSPE-ISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKE--RNIPEHVNKIAPRFQD 402 (504)
T ss_pred ecccccCC-ccccceEeecHH-HHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHH
Confidence 89999541 122677777744 54444321 1112233456677777777765543 2334444444444332
Q ss_pred CCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH-----------HHHHHHHhcCCcceeecCCCCccceeeccc
Q 021783 192 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----------ALSKHVVETTKYFSITVSFGSVKSLISMPC 260 (307)
Q Consensus 192 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~ 260 (307)
.-. . +..++. ....++.|.++.+.+.+. +....+.+.+..+|+.+....
T Consensus 403 ~L~--~-----l~~~~~----v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g--------- 462 (504)
T PLN02760 403 GIK--A-----FSGSPI----IGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG--------- 462 (504)
T ss_pred HHH--H-----HhcCCC----eeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecC---------
Confidence 100 0 001110 011256678888877321 125567777888888765321
Q ss_pred ccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 261 FMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+.+|+++.+ ++++++++.|.++|++
T Consensus 463 -------------------~~lrl~Ppl~it~eeid~~~~~l~~al~~ 491 (504)
T PLN02760 463 -------------------DNIMMSPPLIITPEEVDELISIYGKALKA 491 (504)
T ss_pred -------------------CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 138888764 7888888888888764
No 331
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.27 E-value=5.7e-11 Score=109.09 Aligned_cols=128 Identities=13% Similarity=0.156 Sum_probs=99.0
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----------C-----hHHHHhhcC--CCce---
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----------D-----LDEVASAIG--PWTK--- 62 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----------d-----~~~l~~~l~--~~~~--- 62 (307)
+.+++++.+++||.||++..+|-|.. ..+...|+.+++++.. + .+.+++.+. ++.+
T Consensus 224 n~av~~a~~~~Gd~VLvdRN~HKSv~----haLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~ 299 (714)
T PRK15400 224 NKIVGMYSAPAGSTVLIDRNCHKSLT----HLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPV 299 (714)
T ss_pred HHHHHHHhcCCCCEEEeecccHHHHH----HHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCcc
Confidence 34788889999999999999999888 5678899999998752 3 788888886 3333
Q ss_pred EEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCccCC-----CCcC--CccCCCc---c--EEEeccccccccCCCce
Q 021783 63 LVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMS-----PVLS--RPLELGA---D--IVMHSATKFIAGHSDVM 130 (307)
Q Consensus 63 ~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~-----~~~~--~~~~~~~---d--~~~~s~~K~~~g~~g~~ 130 (307)
.+++++|+. .|.+.|+++|.+.|+.++ +++|+||+. +.++ .+...|. | +++.|.||.+.+.+-
T Consensus 300 ~~vit~pTY-dG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQ-- 374 (714)
T PRK15400 300 HAVITNSTY-DGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQ-- 374 (714)
T ss_pred EEEEECCCC-ccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCcChhhcCCCCCCceEEEEchhhcccchhH--
Confidence 788888865 799999999999999887 799999863 2122 2222344 4 999999999977664
Q ss_pred eEEEEEcCh
Q 021783 131 AGVLAVKGE 139 (307)
Q Consensus 131 ~G~~~~~~~ 139 (307)
+.++.++..
T Consensus 375 aS~LHvkg~ 383 (714)
T PRK15400 375 ASMIHVKGD 383 (714)
T ss_pred HhHHHHcCC
Confidence 667666544
No 332
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.26 E-value=3.6e-10 Score=92.19 Aligned_cols=218 Identities=18% Similarity=0.259 Sum_probs=139.4
Q ss_pred EEEecCCChHHHHhhcC-CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC----CCCcC--CccCC
Q 021783 42 VKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM----SPVLS--RPLEL 110 (307)
Q Consensus 42 ~~~v~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~----~~~~~--~~~~~ 110 (307)
+..+|.+|.++|+.+++ ++.++++++..+...|++.| +++..++|.+||+++|.|++|. +|.+. +....
T Consensus 188 ~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env 267 (427)
T KOG1402|consen 188 VDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENV 267 (427)
T ss_pred ceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhc
Confidence 56677789999999997 78999999999999999986 9999999999999999999996 44443 22333
Q ss_pred CccEEEeccccccccCCCce-eEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHH
Q 021783 111 GADIVMHSATKFIAGHSDVM-AGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFL 189 (307)
Q Consensus 111 ~~d~~~~s~~K~~~g~~g~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l 189 (307)
..|+++ +.|.++| |+. ...+++. +++...+......+.+.-.+..+..+.++++-+.+ +.+.+++..|.+.+
T Consensus 268 ~PDivi--lgKalSG--G~~Pvsavl~~-~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~e--ekL~era~~lG~~l 340 (427)
T KOG1402|consen 268 RPDIVI--LGKALSG--GVYPVSAVLAD-DDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVE--EKLVERAAKLGEIL 340 (427)
T ss_pred CCCeEE--EeccccC--CeeeeEEEEec-HHHHhccCCCccccccCCChHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 467877 6788853 322 3444444 33444344444444455566777777777775543 66677777776665
Q ss_pred hcCCCccEEecCCCC-CCCchHHHhhhccCCCceEEEEeCC----HHHHHHHHhcCCcceeecCCCCccceeecccccCC
Q 021783 190 ASHPRVKKVNYAGLP-EHPGHELHYSQAKGAGSVLSFLTGS----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH 264 (307)
Q Consensus 190 ~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~ 264 (307)
...- ..+. ..|.+ .+..+++|-+..+.+.+ ..++-.+.-.++++|...-+-+
T Consensus 341 ~~~L-------~~l~~~~p~~---v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH------------- 397 (427)
T KOG1402|consen 341 RDQL-------NKLQKKFPHV---VKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTH------------- 397 (427)
T ss_pred HHHH-------Hhccccccch---hheeeccceEEEEEeccccccchhHHHHHHcccccccccCCCC-------------
Confidence 5321 0010 11111 12235667666666632 1234555556777766433211
Q ss_pred CCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 021783 265 ASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 303 (307)
Q Consensus 265 ~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 303 (307)
.+-+|+++.+ +|.++-++.+.+.+.
T Consensus 398 --------------~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 398 --------------GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred --------------CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 2349998875 677777777776653
No 333
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.25 E-value=1e-10 Score=103.46 Aligned_cols=208 Identities=13% Similarity=0.095 Sum_probs=124.5
Q ss_pred ChHHHHhhcC---CCceEEEEeCC-CCCccccc----cHHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCC--ccE
Q 021783 49 DLDEVASAIG---PWTKLVWVESP-TNPRQQIC----DIRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELG--ADI 114 (307)
Q Consensus 49 d~~~l~~~l~---~~~~~v~~~~~-~n~tG~~~----~~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~--~d~ 114 (307)
|++++++.+. .+..+|+++.. +...|... .+++|.++|++||+++|+||++. .|..- ....+| .|+
T Consensus 190 d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi 269 (428)
T PRK07986 190 DIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDI 269 (428)
T ss_pred HHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCE
Confidence 5667777774 46778888874 55556543 29999999999999999999984 22211 112333 466
Q ss_pred EEeccccccccCCC-ceeEEEEEcChhHHHHHHHHH-----HhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHH
Q 021783 115 VMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFLQ-----NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIA 186 (307)
Q Consensus 115 ~~~s~~K~~~g~~g-~~~G~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~ 186 (307)
+ +++|.++| | +.+|.++++++ +.+.+.... ........+..+..+.+.++.++. ..++..+..+.+.
T Consensus 270 ~--t~gK~l~g--G~~p~~av~~~~~-i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~ 344 (428)
T PRK07986 270 L--CLGKALTG--GTMTLSATLTTRE-VAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLR 344 (428)
T ss_pred E--EechhhhC--CcccCcchhchHH-HHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 6 48999853 4 24677777644 544443211 112223445666666666665532 1233333333444
Q ss_pred HHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCC
Q 021783 187 EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHAS 266 (307)
Q Consensus 187 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~ 266 (307)
+.+++.. . ++.+ ...++.|.++.+.+........+.+.+.++|+.+....
T Consensus 345 ~~l~~l~---~--~~~i----------~~vRg~Gl~~~ve~~~~~~~~~~~~~l~~~Gl~~~~~g--------------- 394 (428)
T PRK07986 345 EELAPLR---D--APMV----------ADVRVLGAIGVVETTRPVNMAALQRFFVEQGVWIRPFG--------------- 394 (428)
T ss_pred HHHHHHh---c--CCCE----------EeEeccceEEEEEeCCcccHHHHHHHHHHCCcEEEecC---------------
Confidence 4443211 0 1111 12256788888888644346678888888898775321
Q ss_pred CcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 267 IPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 267 ~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+.+|+.+.+ +++++.++.|.+++++
T Consensus 395 -------------~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 395 -------------KLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred -------------CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 238887765 7888888888887753
No 334
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.25 E-value=5.9e-11 Score=105.68 Aligned_cols=200 Identities=17% Similarity=0.155 Sum_probs=119.5
Q ss_pred CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCC--ccEEEeccccccccCCC
Q 021783 59 PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELG--ADIVMHSATKFIAGHSD 128 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~--~d~~~~s~~K~~~g~~g 128 (307)
.++.+|+++..+...|...+ +++|.++|++||+++|.|+++. .|... ....+| .|+++ ++|.++ .|
T Consensus 220 ~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt--~~K~l~--~G 295 (441)
T PRK05769 220 EEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIIT--LAKAIA--GG 295 (441)
T ss_pred CceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEEE--Eccccc--CC
Confidence 56889999998888899887 9999999999999999999987 22211 122233 47664 789995 35
Q ss_pred ceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc
Q 021783 129 VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 208 (307)
Q Consensus 129 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 208 (307)
..+|+++++++. ...... .........+..+..+.+.++.++. ++.++.+.+.++|++.-. .+ ..+++.
T Consensus 296 ~p~gav~~~~~i-~~~~~~-~~~~T~~g~p~~~aaa~a~L~~l~~---~~~~~~~~~g~~l~~~L~--~l----~~~~~~ 364 (441)
T PRK05769 296 LPLGAVIGRAEL-MFLPPG-SHANTFGGNPVAAAAALATLEELEE---GLLENAQKLGEYLRKELK--EL----KEKYEF 364 (441)
T ss_pred cccEEEEEehhh-hhcCCC-CCCCCCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH--HH----HHhCCC
Confidence 668998888653 322211 1111222345556666666655532 333444444443332100 00 000010
Q ss_pred hHHHhhhccCCCceEEEEeCC------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeE
Q 021783 209 HELHYSQAKGAGSVLSFLTGS------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 282 (307)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i 282 (307)
+ ...++.|.++.+.+.+ .+....+.+.+..+|+.+.... .+.+
T Consensus 365 ~----~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~---------------------------~~~l 413 (441)
T PRK05769 365 I----GDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAG---------------------------KSAI 413 (441)
T ss_pred e----eeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEecCC---------------------------CCEE
Confidence 0 0124567788887732 1335667777777888764311 2348
Q ss_pred EEEecc----CChHHHHHHHHHHHhc
Q 021783 283 RISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 283 Ris~~~----~~~~~~i~~l~~~l~~ 304 (307)
|+++.+ +++++.++.|.+++++
T Consensus 414 r~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 414 RIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 888865 7777888888877764
No 335
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.25 E-value=7e-11 Score=100.55 Aligned_cols=164 Identities=16% Similarity=0.194 Sum_probs=122.1
Q ss_pred HHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHH-cCCEEEEeCccC
Q 021783 28 DRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA-HGALLLVDNSIM 100 (307)
Q Consensus 28 ~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~-~~~~li~D~a~~ 100 (307)
...|+.+++.++++++.+|.+ |+..+.+.++++|..++..-++.|+|.+-|+++|.++..+ +++++++|++-+
T Consensus 180 ~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~G 259 (491)
T KOG1383|consen 180 HAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLG 259 (491)
T ss_pred HHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCc
Confidence 344668999999999999985 8999999999999999999999999999999999999999 999999999987
Q ss_pred CCCcC----Cc-----cCCCccEEEeccccccccCCCceeEEEEEcChhHHH-HHHHHHH----------hcCCCCC--h
Q 021783 101 SPVLS----RP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK-ELYFLQN----------AEGSGLA--P 158 (307)
Q Consensus 101 ~~~~~----~~-----~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~-~~~~~~~----------~~~~~~~--~ 158 (307)
....+ .. ...++.-+..+.||+-..|+| .++++.+++.+.. .+..... ..++..+ .
T Consensus 260 gFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G--~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~v 337 (491)
T KOG1383|consen 260 GFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAG--SSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQV 337 (491)
T ss_pred cccccccccCccccccCCCCceeEeeccceeeeeecC--cEEEEEcccccccceEEEeccccCccccCcccccCCcccHH
Confidence 54432 22 222567888899998878898 8888888665432 2111111 1222222 2
Q ss_pred hhHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcCC
Q 021783 159 FDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHP 193 (307)
Q Consensus 159 ~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~ 193 (307)
..+|+.+- |.+.+....+++.++++.+++.++..+
T Consensus 338 a~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~ 374 (491)
T KOG1383|consen 338 AAQWAALMSLGEEGYRENTQNIVETARKLREGIENIK 374 (491)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 45665444 346677788888888888888777543
No 336
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.23 E-value=2.4e-10 Score=101.89 Aligned_cols=208 Identities=17% Similarity=0.203 Sum_probs=122.6
Q ss_pred HHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc---CCccCCCc--cEEE
Q 021783 51 DEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL---SRPLELGA--DIVM 116 (307)
Q Consensus 51 ~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~~~~~~--d~~~ 116 (307)
+++++.+. +++.+|+++......|...+ +++|.++|++||+++|+||+++ .|.. .....++. |+
T Consensus 205 ~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi-- 282 (445)
T PRK09221 205 DDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDI-- 282 (445)
T ss_pred HHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCE--
Confidence 46666663 56889999999988999887 9999999999999999999984 3322 12223343 65
Q ss_pred eccccccccCCCceeEEEEEcChhHHHHHHHH-------HHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHH
Q 021783 117 HSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAE 187 (307)
Q Consensus 117 ~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~ 187 (307)
.+++|.+++ ....+|.++++++ +.+.+... ......+..+.....+.+.++.+.. ..++..+..+.+.+
T Consensus 283 ~~~gK~l~g-G~~Pi~av~~~~~-i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~ 360 (445)
T PRK09221 283 ITFAKGLTN-GAIPMGAVIASDE-IYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAAELAPYFED 360 (445)
T ss_pred EEecccccc-CcccceeeEEcHH-HHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 468998853 1122677777744 44433210 1112223445556665666655432 12333333333444
Q ss_pred HHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-----HHHHHHHHhcCCcceeecCCCCccceeeccccc
Q 021783 188 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----LALSKHVVETTKYFSITVSFGSVKSLISMPCFM 262 (307)
Q Consensus 188 ~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~ 262 (307)
.++... ..+.+ ...++.|.+..+.+.. ...+..+.+.+.++|+.++.+.
T Consensus 361 ~l~~l~-----------~~~~v----~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~----------- 414 (445)
T PRK09221 361 AVHSLK-----------GLPHV----IDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYTG----------- 414 (445)
T ss_pred HHHhhc-----------cCCCE----EEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeecC-----------
Confidence 443221 01100 0124456666666532 1224567777878888775422
Q ss_pred CCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 263 SHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
+.+|+++.+ ++++++++.|.++++++
T Consensus 415 -----------------~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 415 -----------------DTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred -----------------CEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 238998765 67888888888877654
No 337
>PRK06062 hypothetical protein; Provisional
Probab=99.23 E-value=5.4e-11 Score=106.16 Aligned_cols=209 Identities=15% Similarity=0.146 Sum_probs=123.9
Q ss_pred hHHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCCccEEEe
Q 021783 50 LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELGADIVMH 117 (307)
Q Consensus 50 ~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~~d~~~~ 117 (307)
++++++.++ +++.+|+++..+...|.+.+ +++|.++|++||+++|+||+++ .|..- ....+|+.--+.
T Consensus 200 ~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~ 279 (451)
T PRK06062 200 LAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLI 279 (451)
T ss_pred HHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCee
Confidence 566777774 46789999998888898887 9999999999999999999986 22221 122334333345
Q ss_pred ccccccccCCCc-eeEEEEEcChhHHHHHHHH--HHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHH-----HHH
Q 021783 118 SATKFIAGHSDV-MAGVLAVKGERLAKELYFL--QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIA-----EFL 189 (307)
Q Consensus 118 s~~K~~~g~~g~-~~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~-----~~l 189 (307)
+++|.+++ |. .+|.++++++ +.+.+... ......+..+..+..+.+.++.++. +++.++++.+. +.|
T Consensus 280 t~gK~lgg--G~~Pigav~~~~~-i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~--~~l~~~~~~~G~~~l~~~L 354 (451)
T PRK06062 280 TFAKGVNS--GYVPLGGVAISEA-IAATFADRPYPGGLTYSGHPLACAAAVATINAMEE--EGIVENAARIGAEVLGPGL 354 (451)
T ss_pred eechhhhc--CCcCcEEEEEcHH-HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH
Confidence 68999964 32 3677777754 55444321 1111223345666666666665532 22334443333 333
Q ss_pred hcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH--------------HHHHHHHhcCCcceeecCCCCccce
Q 021783 190 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--------------ALSKHVVETTKYFSITVSFGSVKSL 255 (307)
Q Consensus 190 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~l~~~gi~v~~g~~~~~ 255 (307)
++... .++.+. ..++.|.++.+.+... .....+.+.+.++|+.+...
T Consensus 355 ~~l~~----~~~~v~----------~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~----- 415 (451)
T PRK06062 355 RELAE----RHPSVG----------EVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVN----- 415 (451)
T ss_pred HHHHh----cCCcEE----------eEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeec-----
Confidence 32110 001000 1144566777766310 12556777788888865321
Q ss_pred eecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 256 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
.+.+|+++.+ +++++.++.|.++|+++
T Consensus 416 -----------------------~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 416 -----------------------GNRIHVVPPCTVTEDEVREGLAILDAALAVA 446 (451)
T ss_pred -----------------------CCEEEEECCccCCHHHHHHHHHHHHHHHHHh
Confidence 2248888854 78888888888887654
No 338
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.22 E-value=5.2e-09 Score=95.48 Aligned_cols=171 Identities=16% Similarity=0.114 Sum_probs=120.4
Q ss_pred eEEEcCCCCcchHHHHhhhcccCCc---EEEEecCC-----ChHHHHhhcC----C--CceEEEEeCCCCCccccccHHH
Q 021783 16 EIVAGDDLYGGTDRLLSRVTPKTGV---VVKRVNTC-----DLDEVASAIG----P--WTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 16 ~Vlv~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~-----d~~~l~~~l~----~--~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
+++++...|.+.. +++...|+ .++.||.+ |+++|++.+. . .+-+|+.+..++.+|.+-|+++
T Consensus 224 ~vl~s~~aHyS~~----KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~e 299 (608)
T TIGR03811 224 KWLVPQTKHYSWL----KAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDK 299 (608)
T ss_pred EEEECCCccHHHH----HHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHH
Confidence 6889988898887 66777787 57788874 8899988885 1 2445666778889999999999
Q ss_pred HHHHH---HHcCC--EEEEeCccCCCC---cCC--------------------c----------------cCCCccEEEe
Q 021783 82 IAEMA---HAHGA--LLLVDNSIMSPV---LSR--------------------P----------------LELGADIVMH 117 (307)
Q Consensus 82 l~~~~---~~~~~--~li~D~a~~~~~---~~~--------------------~----------------~~~~~d~~~~ 117 (307)
|+++| +++|+ ++++|+||+... +.+ . .-..+|.++.
T Consensus 300 I~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItv 379 (608)
T TIGR03811 300 IVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTI 379 (608)
T ss_pred HHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEe
Confidence 99999 67887 699999998532 111 0 0025899999
Q ss_pred ccccccccCCCceeEEEEEcChhHHHHHHHHHH-----------------hcCCCCC--hhhHHHHhhc----cccHHHH
Q 021783 118 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-----------------AEGSGLA--PFDCWICLRG----VKTMALR 174 (307)
Q Consensus 118 s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~-----------------~~~~~~~--~~~~~~~~~~----l~~~~~~ 174 (307)
++||++..|-+ +|+++.|+..+.+.+..... ..++... ....|+.... .+.+...
T Consensus 380 DpHK~g~~Py~--~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~ 457 (608)
T TIGR03811 380 DPHKMGYIPYS--AGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKL 457 (608)
T ss_pred CcccccccCCC--eEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHH
Confidence 99999888887 99999998865443321110 1122222 3445554433 3466777
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 021783 175 VEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 175 ~~~~~~~~~~l~~~l~~~ 192 (307)
.++..+.++++.+.++..
T Consensus 458 i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 458 IGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 788888888888888764
No 339
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.22 E-value=1.5e-10 Score=103.07 Aligned_cols=210 Identities=16% Similarity=0.215 Sum_probs=121.4
Q ss_pred hHHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCcc-CCCCcC---CccCCC--ccEE
Q 021783 50 LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSI-MSPVLS---RPLELG--ADIV 115 (307)
Q Consensus 50 ~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~-~~~~~~---~~~~~~--~d~~ 115 (307)
++++++.+. +++.+|+++..+...|...+ +++|.++|++||+++|+||++ +.|..- ....+| .|++
T Consensus 201 ~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv 280 (442)
T PRK13360 201 ADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLL 280 (442)
T ss_pred HHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCcee
Confidence 356777764 56789999999988899887 999999999999999999999 444322 122334 4554
Q ss_pred EeccccccccCCCceeEEEEEcChhHHHHHHHH-------HHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHH
Q 021783 116 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEF 188 (307)
Q Consensus 116 ~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 188 (307)
+++|.+++ ..+..|.++++++ +.+.+... .........+.....+.+.++.+.. +.+.++++++.++
T Consensus 281 --t~gK~l~g-G~~P~gav~~~~~-i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~--~~l~~~~~~~g~~ 354 (442)
T PRK13360 281 --TCAKGLTN-GAIPMGAVFVSSE-IHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYER--EGLLTRAARLAPY 354 (442)
T ss_pred --eeeecccc-CccceEEEEEcHH-HHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHH
Confidence 78999953 1133677777744 44433211 1112223445556666666655432 1233344443333
Q ss_pred HhcCCC-ccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-----HHHHHHHHhcCCcceeecCCCCccceeeccccc
Q 021783 189 LASHPR-VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----LALSKHVVETTKYFSITVSFGSVKSLISMPCFM 262 (307)
Q Consensus 189 l~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~ 262 (307)
+.+.-. +.. ++.+. ..++.|.+..+.+.. .+.+..+.+.+.++|+.+..+.
T Consensus 355 l~~~l~~l~~--~~~v~----------~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~----------- 411 (442)
T PRK13360 355 WEDALHSLRD--APHVI----------DIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYTG----------- 411 (442)
T ss_pred HHHHHHHhhc--CCCee----------eeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEecC-----------
Confidence 332100 000 11110 113445555555521 1235567777777888765321
Q ss_pred CCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 263 SHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
+.+|+++.+ +++|+.++.|.++++++
T Consensus 412 -----------------~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 412 -----------------DILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred -----------------CEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 238998764 77888888887777653
No 340
>PRK12403 putative aminotransferase; Provisional
Probab=99.22 E-value=5.3e-10 Score=100.11 Aligned_cols=208 Identities=13% Similarity=0.079 Sum_probs=121.1
Q ss_pred HHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCC--ccEEE
Q 021783 51 DEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELG--ADIVM 116 (307)
Q Consensus 51 ~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~--~d~~~ 116 (307)
+++++.+. +++.+|+++..+...|...+ +++|.++|++||+++|.||+++ .|..- ....+| .|+++
T Consensus 209 ~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~ 288 (460)
T PRK12403 209 LQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS 288 (460)
T ss_pred HHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEE
Confidence 45555542 46788999998888888876 9999999999999999999995 22221 222233 57775
Q ss_pred eccccccccCCCc-eeEEEEEcChhHHHHHHHHH----HhcCCCCChhhHHHHhhccccHHHH--HHHHH-HHHHHHHHH
Q 021783 117 HSATKFIAGHSDV-MAGVLAVKGERLAKELYFLQ----NAEGSGLAPFDCWICLRGVKTMALR--VEKQQ-DNAQKIAEF 188 (307)
Q Consensus 117 ~s~~K~~~g~~g~-~~G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~-~~~~~l~~~ 188 (307)
++|.+++ |. ..|.++++++ +.+.+.... ........+..+..+.+.++.++.. .++.. +..+.+.+.
T Consensus 289 --~gK~lgg--G~~Piga~v~~~~-i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~ 363 (460)
T PRK12403 289 --IAKGLTS--GYVPMGGLVLSKR-IAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRC 363 (460)
T ss_pred --Ecccccc--cccceEEEEECHH-HHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 8999863 32 3676677644 544443111 1122235566777777777655331 22222 333344444
Q ss_pred HhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH-----------HHHHHHHhcCCcceeecCCCCccceee
Q 021783 189 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----------ALSKHVVETTKYFSITVSFGSVKSLIS 257 (307)
Q Consensus 189 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~gi~v~~g~~~~~~~ 257 (307)
|++.. . .++.+. ..++.|.++.+.+... .....+...+.++|+.+....
T Consensus 364 L~~l~---~-~~~~i~----------~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~------ 423 (460)
T PRK12403 364 LREVF---G-DHPLVG----------EVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTL------ 423 (460)
T ss_pred HHHHH---h-cCCCEE----------eEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEecC------
Confidence 43210 0 011111 1255677888877321 012234445566777664211
Q ss_pred cccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 258 MPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 258 ~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
+.+|+++.+ +++++.++.|.++|+++
T Consensus 424 ----------------------~~~~l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 424 ----------------------GRMIMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred ----------------------CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 127777765 78899999998888654
No 341
>PRK07678 aminotransferase; Validated
Probab=99.21 E-value=1.4e-10 Score=103.58 Aligned_cols=216 Identities=19% Similarity=0.234 Sum_probs=126.7
Q ss_pred HHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc---CCccCCC--ccEEEec
Q 021783 53 VASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL---SRPLELG--ADIVMHS 118 (307)
Q Consensus 53 l~~~l~----~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~~~~~--~d~~~~s 118 (307)
+++.+. +++.+|+++..+...|...+ ++++.++|++||+++|.||++. .|.. .....+| .|++ +
T Consensus 202 l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDiv--t 279 (451)
T PRK07678 202 IDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDII--T 279 (451)
T ss_pred HHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEE--E
Confidence 455553 57899999988877788765 9999999999999999999984 3332 1222344 4666 5
Q ss_pred cccccccCCCceeEEEEEcChhHHHHHHHH------HHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcC
Q 021783 119 ATKFIAGHSDVMAGVLAVKGERLAKELYFL------QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 119 ~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
++|.+++ ..+.+|.++++++ +.+.+... .........+..+..+.+.++.++. +.+.++.+++.++|.+.
T Consensus 280 ~gK~lgg-G~~Pi~av~~~~~-i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~--~~~~~~~~~~g~~l~~~ 355 (451)
T PRK07678 280 MAKGITS-AYLPLSATAVKKE-IYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMEN--ENLIERSAQLGELLLEQ 355 (451)
T ss_pred eeccccc-CCcceeEEEEcHH-HHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHH
Confidence 7999964 2244888888855 44444321 1122234455666666666665533 12333443333333221
Q ss_pred CCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC---------CHHHHHHHHhcCCcceeecCCCCccceeecccccC
Q 021783 193 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG---------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS 263 (307)
Q Consensus 193 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~ 263 (307)
-. ..+..++.+ ...++.|.++.+.+. +.+.+..+...+..+|+.+..... ...
T Consensus 356 l~------~~~~~~~~v----~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~-------~v~- 417 (451)
T PRK07678 356 LK------EELGEHPLV----GDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGD-------TVA- 417 (451)
T ss_pred HH------HHHhcCCCE----EEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCc-------ccc-
Confidence 00 000011100 012556778887772 123356778888888987753211 000
Q ss_pred CCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 264 HASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
...+.+|+++.+ +|+++.++.|.++++++
T Consensus 418 -------------~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 418 -------------GYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred -------------CCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 012459998865 77888888888887764
No 342
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.21 E-value=3.2e-10 Score=94.44 Aligned_cols=130 Identities=19% Similarity=0.169 Sum_probs=93.3
Q ss_pred HHHHHHHh--cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcC-----CCceEEEEeC
Q 021783 3 ALAAVTHL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG-----PWTKLVWVES 68 (307)
Q Consensus 3 al~~~~~~--~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~-----~~~~~v~~~~ 68 (307)
|+-.++.+ -.+++-|+++-|.|+-+. .-+..+|...+..-++ |.++|++.++ -+++++++-+
T Consensus 148 ai~~il~l~~~~~~~GvliPiPQYPLYs----Ati~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvIN 223 (475)
T KOG0258|consen 148 AIRSILSLLIAGKKTGVLIPIPQYPLYS----ATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVIN 223 (475)
T ss_pred HHHHHHHHHhcCCCCceEeecCCCchhH----HHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEEC
Confidence 34344443 357899999999998777 5556677765544432 7788877765 3678888889
Q ss_pred CCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-------------CccCCCc----cEEEeccccccccCCC
Q 021783 69 PTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-------------RPLELGA----DIVMHSATKFIAGHSD 128 (307)
Q Consensus 69 ~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-------------~~~~~~~----d~~~~s~~K~~~g~~g 128 (307)
|.||||.+.. +++|..+|+++++.++.|++|-.-.+. .+..... -+...|.||.+.|--|
T Consensus 224 PGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG 303 (475)
T KOG0258|consen 224 PGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECG 303 (475)
T ss_pred CCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeec
Confidence 9999999984 999999999999999999998422111 1111111 2556777999888888
Q ss_pred ceeEEEEE
Q 021783 129 VMAGVLAV 136 (307)
Q Consensus 129 ~~~G~~~~ 136 (307)
-|+|++=.
T Consensus 304 ~RGGYmEv 311 (475)
T KOG0258|consen 304 QRGGYMES 311 (475)
T ss_pred ccCCeeec
Confidence 88998754
No 343
>PRK05965 hypothetical protein; Provisional
Probab=99.20 E-value=2.2e-10 Score=102.45 Aligned_cols=209 Identities=13% Similarity=0.127 Sum_probs=127.7
Q ss_pred HHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CC---CcCCccCCC--ccEEE
Q 021783 51 DEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SP---VLSRPLELG--ADIVM 116 (307)
Q Consensus 51 ~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~---~~~~~~~~~--~d~~~ 116 (307)
+++++.+. +++.+|+++..+...|...+ +++|.++|++||+++|.||++. .| .......+| .|+++
T Consensus 202 ~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~ 281 (459)
T PRK05965 202 AALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT 281 (459)
T ss_pred HHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEE
Confidence 46666664 46889999988887787764 9999999999999999999985 33 222333344 45555
Q ss_pred eccccccccCCC-ceeEEEEEcChhHHHHHHHH-------HHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHH
Q 021783 117 HSATKFIAGHSD-VMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEF 188 (307)
Q Consensus 117 ~s~~K~~~g~~g-~~~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 188 (307)
++|.++| | +.+|.++++++ +.+.+... .........+..+..+.+.++.++. +++.+++..+.++
T Consensus 282 --~gKgl~g--G~~Pi~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~--~~l~~~~~~~g~~ 354 (459)
T PRK05965 282 --VAKGLTS--GYVPMGAVLMSDH-VYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHE--GGLLANGQKAGPR 354 (459)
T ss_pred --echhhcc--CCcceeEEEEcHH-HHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHH
Confidence 7999854 4 34888888755 44444211 1112233445666666666655432 3345555555555
Q ss_pred HhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-----------HHHHHHHHhcCCcceeecCCCCccceee
Q 021783 189 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----------LALSKHVVETTKYFSITVSFGSVKSLIS 257 (307)
Q Consensus 189 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~gi~v~~g~~~~~~~ 257 (307)
+.+.-. . +..+|.+ ...++.|.++.+.+.. .+....+.+.+.++|+.++..
T Consensus 355 l~~~l~--~-----l~~~~~v----~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~------- 416 (459)
T PRK05965 355 FAAGLD--A-----LRAHPLV----GDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAF------- 416 (459)
T ss_pred HHHHHH--h-----hccCCCE----EEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEec-------
Confidence 543210 0 1111110 1225677888887721 113566777788888876431
Q ss_pred cccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 258 MPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 258 ~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+++.+|+.+.+ +++++.++.|.++|++
T Consensus 417 --------------------g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 417 --------------------GDGVLGFAPALCCTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred --------------------CCcEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 12348888554 7888888888888764
No 344
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.20 E-value=4.5e-10 Score=99.57 Aligned_cols=206 Identities=14% Similarity=0.141 Sum_probs=126.6
Q ss_pred hHHHHhhcC---CCceEEEEeCC-CCCcccccc----HHHHHHHHHHcCCEEEEeCccCCCC--cCC---ccCCC--ccE
Q 021783 50 LDEVASAIG---PWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPV--LSR---PLELG--ADI 114 (307)
Q Consensus 50 ~~~l~~~l~---~~~~~v~~~~~-~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~~~--~~~---~~~~~--~d~ 114 (307)
++.+++.+. +++.+|+++.. +...|...+ ++++.++|++||+++|+||+| .|. .-. ...+| .|+
T Consensus 193 l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDi 271 (429)
T PRK06173 193 IEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGVVPDI 271 (429)
T ss_pred HHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cCCCcCCcchHHHhcCCCCCE
Confidence 556677764 57899999985 777777753 999999999999999999998 332 111 12233 566
Q ss_pred EEeccccccccCCCc-eeEEEEEcChhHHHHHHHH-----HHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHH
Q 021783 115 VMHSATKFIAGHSDV-MAGVLAVKGERLAKELYFL-----QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIA 186 (307)
Q Consensus 115 ~~~s~~K~~~g~~g~-~~G~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~ 186 (307)
++ ++|.++| |. .++.++.+++ +.+.+... .........+..+..+.+.++.+.. ..++..+..+.+.
T Consensus 272 v~--~gK~l~g--G~~p~~a~~~~~~-i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~ 346 (429)
T PRK06173 272 MC--IGKALTG--GYLTLSATITTEA-IAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLK 346 (429)
T ss_pred EE--eehhhhC--CccccceEEecHH-HHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 65 8999853 42 3677777644 44443210 1111223455666666666665532 1233333444444
Q ss_pred HHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCC
Q 021783 187 EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHAS 266 (307)
Q Consensus 187 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~ 266 (307)
+.|+... . ++.+. ..++.|.++.+.+.+......+.+.+.++|+.+....
T Consensus 347 ~~L~~~~---~--~~~v~----------~vRg~Gl~~~iel~~~~~~~~i~~~l~e~Gi~v~~~g--------------- 396 (429)
T PRK06173 347 QELAPAA---E--FDSVA----------EVRVLGAIGVVEMKEPVNMATLQPRFVEHGIWVRPFG--------------- 396 (429)
T ss_pred HHHHHhh---c--CCCee----------eeeccceEEEEEeCCcccHHHHHHHHHHCCeEEEecC---------------
Confidence 4443210 0 11111 1245688888988655446778888888898775421
Q ss_pred CcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 267 IPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 267 ~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+.+|+.+.+ +++++.++.|.++|++
T Consensus 397 -------------~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 397 -------------KLVYIMPPFIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred -------------CEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 137887765 7888888888888764
No 345
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.20 E-value=1.5e-10 Score=103.36 Aligned_cols=201 Identities=10% Similarity=0.099 Sum_probs=119.1
Q ss_pred CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCC--CccEEEeccccccccCCC
Q 021783 59 PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLEL--GADIVMHSATKFIAGHSD 128 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~--~~d~~~~s~~K~~~g~~g 128 (307)
.++.+|+++..+...|...+ +++|.++|++||+++|.||++. .|... ....+ ..|+++ ++|.+++ |
T Consensus 221 ~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~g--G 296 (457)
T PRK05639 221 DEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII--FGKGVAS--G 296 (457)
T ss_pred CceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEE--echhhcC--C
Confidence 57899999988887787664 9999999999999999999986 22111 11222 357776 8999963 3
Q ss_pred ceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCC
Q 021783 129 VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 206 (307)
Q Consensus 129 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~ 206 (307)
..+|+++++++ +.+.... .........+.....+.+.++.+.. ..++..+..+.+.+.|++... + ++.+.
T Consensus 297 ~pi~av~~~~~-i~~~~~~-~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~--~--~~~~~-- 368 (457)
T PRK05639 297 MGLSGVIGRKE-LMDLTSG-SALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKE--S--FEVIG-- 368 (457)
T ss_pred CcceeEEehHH-HHhhcCC-CcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHH--h--CCCEE--
Confidence 44788888755 4332111 1112223445556666666655432 122222233334433332100 0 01111
Q ss_pred CchHHHhhhccCCCceEEEEeCC------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCC
Q 021783 207 PGHELHYSQAKGAGSVLSFLTGS------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTED 280 (307)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 280 (307)
..++.|.++.+.+.. .+....+.+.+..+|+.+.... ...+
T Consensus 369 --------~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g-------------------------~~~~ 415 (457)
T PRK05639 369 --------DVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYG-------------------------MFGN 415 (457)
T ss_pred --------eeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecC-------------------------CCCC
Confidence 125667788877621 2335677778888888765321 1134
Q ss_pred eEEEEecc----CChHHHHHHHHHHHhc
Q 021783 281 LVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 281 ~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
.+|+++.+ +++++.++.|.++++.
T Consensus 416 ~lr~~Ppl~it~~~id~~~~~l~~~l~~ 443 (457)
T PRK05639 416 VIRITPPLVITKEIAEKGLEIMERAIKD 443 (457)
T ss_pred EEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 59999976 6777777888777654
No 346
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.18 E-value=1.4e-10 Score=103.74 Aligned_cols=211 Identities=16% Similarity=0.171 Sum_probs=124.8
Q ss_pred hHHHHhhcC------CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-C---CCcCCccCCC--cc
Q 021783 50 LDEVASAIG------PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-S---PVLSRPLELG--AD 113 (307)
Q Consensus 50 ~~~l~~~l~------~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~---~~~~~~~~~~--~d 113 (307)
++.+++.+. +++.+|+++..+...|.+.+ ++++.++|++||+++|.||++. . |.+.....+| .|
T Consensus 215 ~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PD 294 (464)
T PRK06938 215 LHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPD 294 (464)
T ss_pred HHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCC
Confidence 456777765 25789999988877787764 9999999999999999999985 3 3222223344 45
Q ss_pred EEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCC
Q 021783 114 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP 193 (307)
Q Consensus 114 ~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~ 193 (307)
+++ ++|.++| |+..|.++++++ + +.+............+.....+.+.++.+.. +++.++++.+.++|.+.-
T Consensus 295 iv~--~gKglgg--G~PlsAv~~~~~-~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~--~~l~~~~~~~G~~l~~~L 366 (464)
T PRK06938 295 VVV--LSKAIGG--SLPLAVVVYREW-L-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKE--HRLAEHAAAMGERLREHL 366 (464)
T ss_pred EEE--eeccccC--CCceEEEeehhH-h-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHH
Confidence 555 7999853 566888888754 3 2221111111223344566666666655432 234445555444443221
Q ss_pred -CccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC--------------HHHHHHHHhcCCcceeecCCCCccceeec
Q 021783 194 -RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--------------LALSKHVVETTKYFSITVSFGSVKSLISM 258 (307)
Q Consensus 194 -~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~ 258 (307)
.+.. .++.+. ..++.|.++.+.+.. .+....+...+..+|+.+..+..
T Consensus 367 ~~l~~-~~~~i~----------~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~------ 429 (464)
T PRK06938 367 RQLQR-DYPQLG----------DVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGGR------ 429 (464)
T ss_pred HHHHH-hCCCee----------eeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCC------
Confidence 0000 001111 125667788887732 12345677777778887754321
Q ss_pred ccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 259 PCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
..+.+|+.+.+ +++++.++.|.++|.+
T Consensus 430 -------------------~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 430 -------------------HGSVVRFLPPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred -------------------CCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 12348887654 7788888888887764
No 347
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.17 E-value=2.5e-10 Score=101.19 Aligned_cols=218 Identities=12% Similarity=0.104 Sum_probs=128.7
Q ss_pred EEecCCChHHHHhhcC---CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccCCCC-c---CCccCC-
Q 021783 43 KRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPV-L---SRPLEL- 110 (307)
Q Consensus 43 ~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~~~-~---~~~~~~- 110 (307)
..++.+|++++++.+. +++.+|+++......|...+ +++|.++|++||+++|+||++. |. . .....+
T Consensus 181 ~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~R~G~~ga~~~~g 259 (433)
T PRK00615 181 LSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GFRVAQGGAAAIYH 259 (433)
T ss_pred EeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-cccccHhHHHHhcC
Confidence 3445678888888874 46789999998888888876 6799999999999999999994 32 1 111223
Q ss_pred -CccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH-h--cCCCCChhhHHHHhhccccHHH--HHHHHHHHHHH
Q 021783 111 -GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-A--EGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQK 184 (307)
Q Consensus 111 -~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~ 184 (307)
..|++ +++|.+++ |..+|+++++++ +.+.+..... . ......+..+..+.+.++.++. ..++..+..+.
T Consensus 260 v~PDi~--~~gK~lgg--G~p~~av~~~~~-i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~ 334 (433)
T PRK00615 260 VKPDIT--VYGKILGG--GLPAAAVVAHKS-IMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQN 334 (433)
T ss_pred CCCCeE--EEcccccC--CcceeeeeecHH-HHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 35665 48999963 344888888755 4444321111 1 1222355666666666654432 13333333344
Q ss_pred HHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-------------CHHHHHHHHhcCCcceeecCCCC
Q 021783 185 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------------SLALSKHVVETTKYFSITVSFGS 251 (307)
Q Consensus 185 l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~~gi~v~~g~ 251 (307)
+.+.|++... + .++ + +. ..+ .+.++.+.+. +.+....+..++.++|+.+....
T Consensus 335 l~~~l~~~~~--~---~g~---~-v~----~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~ 400 (433)
T PRK00615 335 FLSPIEEMIR--S---QGF---P-VS----LVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSP 400 (433)
T ss_pred HHHHHHHHHH--H---cCC---C-eE----EEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCcc
Confidence 4333332100 0 000 0 00 002 3556666652 12334578888888899776543
Q ss_pred ccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 252 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
.. ..+++.....+|+++.++.+.++++++
T Consensus 401 ~~-------------------------~~~ls~~ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 401 FE-------------------------ASFLSSAHSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred cc-------------------------ccceecCCCHHHHHHHHHHHHHHHHHH
Confidence 21 112555555588999999999888754
No 348
>PRK06105 aminotransferase; Provisional
Probab=99.17 E-value=3.7e-10 Score=101.10 Aligned_cols=211 Identities=13% Similarity=0.104 Sum_probs=126.1
Q ss_pred HHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCCccEEEec
Q 021783 51 DEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELGADIVMHS 118 (307)
Q Consensus 51 ~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~~d~~~~s 118 (307)
+++++.+. .++.+|+++..+...|...+ ++++.++|++||+++|.||++. .|..- ....++..--+.+
T Consensus 205 ~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~ 284 (460)
T PRK06105 205 NELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILV 284 (460)
T ss_pred HHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeee
Confidence 55666662 46789999988888888876 9999999999999999999984 44322 2223343333446
Q ss_pred cccccccCCCceeEEEEEcChhHHHHHHHHH-------HhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhc
Q 021783 119 ATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-------NAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLAS 191 (307)
Q Consensus 119 ~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~ 191 (307)
++|.++|- .+.+|+++++++ +.+.+.... ........+..+..+.+.++.+.. +++.++.+.+.++|++
T Consensus 285 ~gK~lggG-~~P~~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~--~~l~~~v~~~g~~l~~ 360 (460)
T PRK06105 285 MSKQLSSS-YQPLSAVLMNEK-VYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEE--RDLVGNAAERGARLQA 360 (460)
T ss_pred eecccccC-cccceEEEEcHH-HHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHH
Confidence 89999641 133788888744 544443211 112234455666666666665543 2334444444444432
Q ss_pred CCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-----------HHHHHHHHhcCCcceeecCCCCccceeeccc
Q 021783 192 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----------LALSKHVVETTKYFSITVSFGSVKSLISMPC 260 (307)
Q Consensus 192 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~ 260 (307)
.-. . +..+|.+ ...++.|.++.+.+.. .+.+..+...+..+|+.+....
T Consensus 361 ~L~--~-----l~~~~~v----~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~g--------- 420 (460)
T PRK06105 361 RLR--A-----LADHPLV----GEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMG--------- 420 (460)
T ss_pred HHH--H-----hhcCCCe----EEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEecC---------
Confidence 100 0 1111110 1225567777777621 1124567777777888765311
Q ss_pred ccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 261 FMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+.+|+++.+ +++++.++.|.+++++
T Consensus 421 -------------------~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 449 (460)
T PRK06105 421 -------------------DTLAFCPPLIITAAQVDEMVDRFGRALDD 449 (460)
T ss_pred -------------------CEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 238888764 7888888888888764
No 349
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.16 E-value=1.6e-10 Score=102.98 Aligned_cols=209 Identities=19% Similarity=0.163 Sum_probs=120.5
Q ss_pred hHHHHhhcC---CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCC--CccEEE
Q 021783 50 LDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLEL--GADIVM 116 (307)
Q Consensus 50 ~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~--~~d~~~ 116 (307)
++++++.+. .++.+|+++..+...|.+.+ +++|.++|++||+++|.||++. .|... ....+ ..|+++
T Consensus 212 ~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~ 291 (443)
T PRK08297 212 LAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVA 291 (443)
T ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEE
Confidence 345555664 67899999988887887753 9999999999999999999985 33321 11122 357665
Q ss_pred eccccccccCCCceeEEEEEcChhHHHHHHH-H----HHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhc
Q 021783 117 HSATKFIAGHSDVMAGVLAVKGERLAKELYF-L----QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLAS 191 (307)
Q Consensus 117 ~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~ 191 (307)
++|.+ ++ +|++..+ + +.+.... . .........+.....+.+.++.+.. +.+.++.+++.+++.+
T Consensus 292 --~gK~l-~~----~a~l~~~-~-i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~ 360 (443)
T PRK08297 292 --FGKKT-QV----CGIMAGR-R-VDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEE--DGLVENAARQGEYLLA 360 (443)
T ss_pred --ecccc-cc----cceecch-H-HHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHH
Confidence 79987 32 4555543 2 2221111 1 1112223345555555555554422 2333444444443332
Q ss_pred CCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHH
Q 021783 192 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEV 271 (307)
Q Consensus 192 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~ 271 (307)
.-. .+ ....|.+ ....++.|.++.+.+.+.+....+.+.+..+|+.+.++.
T Consensus 361 ~L~--~l----~~~~~~~---~~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~~-------------------- 411 (443)
T PRK08297 361 RLE--EL----AAEFPAV---VSNVRGRGLMCAFDLPTTADRDEVIRRLWEEGVLVLPCG-------------------- 411 (443)
T ss_pred HHH--HH----HHHCCCc---ceeeeccceEEEEEecCHHHHHHHHHHHHHCCEEEecCC--------------------
Confidence 100 00 0000100 001245688888998766556788888888898775422
Q ss_pred HHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 272 RQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 272 ~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
.+.+|+++++ +++++.++.|.++++++
T Consensus 412 -------~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 412 -------ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred -------CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 1238887765 67788888888777654
No 350
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.16 E-value=2.9e-09 Score=100.21 Aligned_cols=117 Identities=21% Similarity=0.214 Sum_probs=96.6
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEE
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALL 93 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~l 93 (307)
..+|+|++..|+.+...++..++..|++++. +++++.++.++..+++++|+. .|.+.|+++|.+++|+.|.++
T Consensus 168 ~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------~~~~~~~~~~~~~v~vq~P~~-~G~i~d~~~i~~~~h~~gal~ 240 (954)
T PRK12566 168 SNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------DAVDNLAAHAVFGALLQYPDT-HGEIRDLRPLIDQLHGQQALA 240 (954)
T ss_pred CCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------cchhhcCCCCEEEEEEECCCC-ceEEccHHHHHHHHHHcCCEE
Confidence 5789999999999999999999999999885 444455666789999999986 799999999999999999886
Q ss_pred EEeCcc--CCCCcCCccCCCccEEEecccc-----ccccCCCceeEEEEEcChhH
Q 021783 94 LVDNSI--MSPVLSRPLELGADIVMHSATK-----FIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 94 i~D~a~--~~~~~~~~~~~~~d~~~~s~~K-----~~~g~~g~~~G~~~~~~~~~ 141 (307)
+ +.+. +.+.+..+.++|+|+++++.+- .||||. .|++.++++..
T Consensus 241 ~-~~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~---ag~~a~~~~~~ 291 (954)
T PRK12566 241 C-VAADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYGGPH---AAYFACRDDYK 291 (954)
T ss_pred E-EEeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCCCCC---eeeeeehHHHH
Confidence 6 4443 4567778999999999998775 566665 89999997643
No 351
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.16 E-value=1.8e-09 Score=95.99 Aligned_cols=217 Identities=16% Similarity=0.157 Sum_probs=129.0
Q ss_pred EEEEecCCChHHHHhhcC---CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccCCCCcC---CccCC
Q 021783 41 VVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLS---RPLEL 110 (307)
Q Consensus 41 ~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~---~~~~~ 110 (307)
++..++.+|++.+++.+. .++.+|+++...+..|.+.+ +++|.++|++||+++|.||++...... ....+
T Consensus 178 ~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~ 257 (428)
T PRK12389 178 EVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLL 257 (428)
T ss_pred ceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHh
Confidence 345566778999988885 46889999999888898887 999999999999999999998733111 11123
Q ss_pred C--ccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH---HHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHH
Q 021783 111 G--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL---QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQ 183 (307)
Q Consensus 111 ~--~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~ 183 (307)
| .|+ .+++|.+++ |+.+|.++++++ +.+.+... .........+..+..+.+.++.++. ..++..+..+
T Consensus 258 gv~PDi--vt~gK~lgg--G~Pi~av~~~~~-i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~ 332 (428)
T PRK12389 258 GVEPDL--TALGKIIGG--GLPIGAYGGRKD-IMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGA 332 (428)
T ss_pred CCCCCe--eeechhhcC--CCceeEEeEHHH-HHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 4 465 468999954 455788888754 54444211 1112223455666666666655432 2233333334
Q ss_pred HHHHHHhc----CCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-------------CHHHHHHHHhcCCcceee
Q 021783 184 KIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------------SLALSKHVVETTKYFSIT 246 (307)
Q Consensus 184 ~l~~~l~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~~gi~ 246 (307)
.+.+.|++ ++.+..+ .+ ..+++.+.+. +.+....+.+.+..+|+.
T Consensus 333 ~l~~~L~~l~~~~~~~~~v-----------------~r-~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 394 (428)
T PRK12389 333 MLEEGILEAAEKHGITITI-----------------NR-LKGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGIN 394 (428)
T ss_pred HHHHHHHHHHHhCCCCEEE-----------------Ee-cCcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcE
Confidence 44444432 1111000 01 1235555442 112356777888888987
Q ss_pred cCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 247 VSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 247 v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
+....... . .+.+.++.+|++++++.|.++++++
T Consensus 395 ~~~~~~~~-~------------------------~~~l~~t~e~id~~~~~l~~~l~~~ 428 (428)
T PRK12389 395 LAPSKYEA-W------------------------FLTTAHTEEDIEETLEAVDRAFAQL 428 (428)
T ss_pred eecCCCCC-e------------------------eecCCCCHHHHHHHHHHHHHHHHhC
Confidence 76532100 0 0122334478999999999988653
No 352
>PRK07482 hypothetical protein; Provisional
Probab=99.15 E-value=2.5e-10 Score=102.24 Aligned_cols=212 Identities=12% Similarity=0.099 Sum_probs=123.3
Q ss_pred hHHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCC---cCCccCCC--ccEE
Q 021783 50 LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPV---LSRPLELG--ADIV 115 (307)
Q Consensus 50 ~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~---~~~~~~~~--~d~~ 115 (307)
++++++.+. +++.+|+++..+...|...+ +++|.++|++||+++|.||++. .|. ......+| .|++
T Consensus 206 ~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv 285 (461)
T PRK07482 206 ADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLI 285 (461)
T ss_pred HHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEE
Confidence 466777763 46899999988877787753 9999999999999999999985 332 22223344 5666
Q ss_pred EeccccccccCCCc-eeEEEEEcChhHHHHHHHH-------HHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHH
Q 021783 116 MHSATKFIAGHSDV-MAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAE 187 (307)
Q Consensus 116 ~~s~~K~~~g~~g~-~~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 187 (307)
+ +.|.++| |. .+|.++++++ +.+.+... .........+..+..+.+.++.+.. +.+.++++.+.+
T Consensus 286 ~--~gKgl~g--G~~Pi~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~--~~l~~~~~~~g~ 358 (461)
T PRK07482 286 T--VAKGLTS--AYAPLSGSIVGEK-VWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILER--ENLVGNAAEVGA 358 (461)
T ss_pred E--Ecccccc--CccccceeeecHH-HHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHH
Confidence 6 7999854 32 3677777744 44433211 1112223445666666666665432 233444444444
Q ss_pred HHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-H----------HHHHHHHhcCCcceeecCCCCcccee
Q 021783 188 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-L----------ALSKHVVETTKYFSITVSFGSVKSLI 256 (307)
Q Consensus 188 ~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~~~l~~~gi~v~~g~~~~~~ 256 (307)
++.+.-. . ..+.+|.+ ...++.|.++.+.+.. . .....+...+..+|+.++.+..
T Consensus 359 ~l~~~L~--~----l~~~~~~v----~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~~---- 424 (461)
T PRK07482 359 YFRARLR--A----AFGDHPLV----GEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMPH---- 424 (461)
T ss_pred HHHHHHH--H----HHhcCCCE----EEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCCC----
Confidence 4332100 0 00011100 0125567788887731 1 1245677777778887643210
Q ss_pred ecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 257 SMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 257 ~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
.+.+|+.+.+ +|+++.++.|.++|++
T Consensus 425 ----------------------~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 425 ----------------------GDILGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred ----------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 1237777654 7888888888887754
No 353
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.14 E-value=3.4e-10 Score=101.07 Aligned_cols=209 Identities=12% Similarity=0.127 Sum_probs=125.5
Q ss_pred hHHHHhhcC---CCceEEEEeC-CCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc---CCccCCC--ccEE
Q 021783 50 LDEVASAIG---PWTKLVWVES-PTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL---SRPLELG--ADIV 115 (307)
Q Consensus 50 ~~~l~~~l~---~~~~~v~~~~-~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~~~~~--~d~~ 115 (307)
++++++.+. .++.+|+++. ++...|...+ ++++.++|++||+++|.||++. .|.. .....+| .|++
T Consensus 208 ~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDiv 287 (453)
T PRK06943 208 LADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFL 287 (453)
T ss_pred HHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeE
Confidence 466777664 5789999998 4777787653 9999999999999999999985 3332 2223344 4666
Q ss_pred EeccccccccCCC-ceeEEEEEcChhHHHHHHHH------HHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHH
Q 021783 116 MHSATKFIAGHSD-VMAGVLAVKGERLAKELYFL------QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEF 188 (307)
Q Consensus 116 ~~s~~K~~~g~~g-~~~G~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 188 (307)
+ ++|.++| | +.+|.++++++ +.+.+... .........+..+..+.+.++.++. +++.++..++.++
T Consensus 288 t--~gKgl~g--G~~Pi~av~~~~e-i~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~--~~l~~~~~~~G~~ 360 (453)
T PRK06943 288 C--LSKGISG--GYLPLSLVLSRDA-IFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAE--DDVLARNARKSAR 360 (453)
T ss_pred e--eehhhcc--CcccceEEEEcHH-HHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHH
Confidence 5 6998853 4 34888888755 44433211 0111222345566666666655533 2334444444444
Q ss_pred HhcCC-CccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-CH----HHHHHHHhcCCcceeecCCCCccceeeccccc
Q 021783 189 LASHP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SL----ALSKHVVETTKYFSITVSFGSVKSLISMPCFM 262 (307)
Q Consensus 189 l~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~ 262 (307)
+.+.- .+.. ++.+. ..++.|.++.+.+. +. +....+...+..+|+.+....
T Consensus 361 l~~~L~~l~~--~~~v~----------~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~g----------- 417 (453)
T PRK06943 361 LRAALAPLAA--HPQVR----------HLRQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRPIG----------- 417 (453)
T ss_pred HHHHHHHHhc--CCCEE----------eEeccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEecC-----------
Confidence 43221 0000 11111 22567888888874 21 235567777777888664311
Q ss_pred CCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 263 SHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
+.+|+++.+ +++++.++.|.++|+++
T Consensus 418 -----------------~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 418 -----------------TTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred -----------------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 127887654 78888888888888653
No 354
>PRK06149 hypothetical protein; Provisional
Probab=99.14 E-value=5.4e-10 Score=108.59 Aligned_cols=204 Identities=17% Similarity=0.194 Sum_probs=127.2
Q ss_pred CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCcc-CCCCcC----CccCCC--ccEEEeccccccccCC
Q 021783 59 PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSI-MSPVLS----RPLELG--ADIVMHSATKFIAGHS 127 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~-~~~~~~----~~~~~~--~d~~~~s~~K~~~g~~ 127 (307)
.++.+|+++......|.+.+ ++++.++|++||+++|.||++ +.|... ....+| .|++ +++|.+++
T Consensus 743 ~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--t~gK~lg~-- 818 (972)
T PRK06149 743 RGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--TMAKGMGN-- 818 (972)
T ss_pred CceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE--EecccccC--
Confidence 46789999988888888877 999999999999999999999 444332 122234 4665 68999953
Q ss_pred CceeEEEEEcChhHHHHHHHHH-HhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCC
Q 021783 128 DVMAGVLAVKGERLAKELYFLQ-NAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 206 (307)
Q Consensus 128 g~~~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~ 206 (307)
|..+|+++++++ +.+.+.... ...+...++..+..+.+.++.++. +++.++++.+.++|++.-. .+ ...+
T Consensus 819 G~Pl~av~~~~~-i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~--e~l~~~~~~~G~~l~~~L~--~l----~~~~ 889 (972)
T PRK06149 819 GHPLGAVITRRE-IAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLRE--EKLQENARRVGDHLKARLE--AL----ADRH 889 (972)
T ss_pred CeeeEEEEEcHH-HHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH--HH----HHhC
Confidence 455899998854 544443211 112234556677777777765533 3445556544444432210 00 0001
Q ss_pred CchHHHhhhccCCCceEEEEeC--------CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC
Q 021783 207 PGHELHYSQAKGAGSVLSFLTG--------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT 278 (307)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 278 (307)
|.+ ...++.|.++.+.+. ..+....+.+.+.++||.+..... .
T Consensus 890 ~~i----~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~-------------------------~ 940 (972)
T PRK06149 890 PLI----GAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGD-------------------------H 940 (972)
T ss_pred CCe----EEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCC-------------------------C
Confidence 100 112566778888772 223456788888888997754221 2
Q ss_pred CCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 279 EDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 279 ~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
.+.+|+.+.+ ++++..++.|.++|.+
T Consensus 941 ~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 941 LNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 3458887764 7888888888888864
No 355
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.14 E-value=1e-09 Score=97.39 Aligned_cols=207 Identities=11% Similarity=0.052 Sum_probs=122.3
Q ss_pred ChHHHHhhcC---CCceEEEEeCC-CCCccccc----cHHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCC--CccE
Q 021783 49 DLDEVASAIG---PWTKLVWVESP-TNPRQQIC----DIRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLEL--GADI 114 (307)
Q Consensus 49 d~~~l~~~l~---~~~~~v~~~~~-~n~tG~~~----~~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~--~~d~ 114 (307)
|++++++.+. .+.++|+++.. +...|... .+++|.++|++||+++|+||+|. .|... ....+ ..|+
T Consensus 193 ~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi 272 (427)
T TIGR00508 193 AITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPDI 272 (427)
T ss_pred HHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCCE
Confidence 4566666664 46788899875 66555543 49999999999999999999983 22211 11122 3566
Q ss_pred EEeccccccccCCCc-eeEEEEEcChhHHHHHHHHH-----HhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHH
Q 021783 115 VMHSATKFIAGHSDV-MAGVLAVKGERLAKELYFLQ-----NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIA 186 (307)
Q Consensus 115 ~~~s~~K~~~g~~g~-~~G~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~ 186 (307)
++ ++|.++| |. .++.++.+++ +.+.+.... ........+.....+.+.++.+.. ..++..+..+++.
T Consensus 273 ~~--~gK~l~g--G~~p~~a~~~~~~-~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~ 347 (427)
T TIGR00508 273 LC--VGKALTG--GYMTLSATVTTDK-VAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLK 347 (427)
T ss_pred EE--echhhhc--CcccceEEEEcHH-HHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 65 8999843 43 3666776644 544443211 111122345566666666654432 1233444444555
Q ss_pred HHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCC
Q 021783 187 EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHAS 266 (307)
Q Consensus 187 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~ 266 (307)
+.|++.. . ++.+. ..++.|.++.+.+.+......+.+.+.++||.+....
T Consensus 348 ~~L~~l~---~--~~~i~----------~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gv~~~~~~--------------- 397 (427)
T TIGR00508 348 RELSPLR---K--NPVVK----------DVRVLGAIGVVEMYKPVNVEELQKKFVEQGVWIRPFG--------------- 397 (427)
T ss_pred HHHHHhh---c--CCCEE----------eEeccccEEEEEECCccCHHHHHHHHHHCCeEEEecC---------------
Confidence 5554321 0 11111 1255688888888644446778888888888764311
Q ss_pred CcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 021783 267 IPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 303 (307)
Q Consensus 267 ~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 303 (307)
+.+|+++.+ +|++++++.|.++|+
T Consensus 398 -------------~~l~~~ppl~~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 398 -------------KLIYVMPPYIITTEQLQKLTAALIEALH 425 (427)
T ss_pred -------------CEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 138888874 677777777777764
No 356
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.14 E-value=4.8e-10 Score=94.96 Aligned_cols=129 Identities=13% Similarity=0.083 Sum_probs=90.2
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC--------ChHHHHhhcC---CCceEEEEeCCCCCcccccc-H
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAIG---PWTKLVWVESPTNPRQQICD-I 79 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--------d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~-~ 79 (307)
..++.|+.+...|-+.+ ..+...|.+++.||.. |.+.+++.+. ++..+.++++++-..|...| +
T Consensus 99 ~~a~~Viw~ridqkSc~----kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i 174 (389)
T PF05889_consen 99 PKAKYVIWPRIDQKSCF----KAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDI 174 (389)
T ss_dssp CT--EEEEEEEETHHHH----HHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----H
T ss_pred cCCceEEEeeccccchH----HHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccH
Confidence 56899999999988887 5567789999999852 5666666664 56678888888777889988 9
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcC------CccCC-CccEEEeccccccccCCCceeEEEEEcChhHHHHHH
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLS------RPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 146 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~------~~~~~-~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~ 146 (307)
.+|+++|++||++.++.+||+.-... ..... -.|+.+.|+.|.|.-|.| ++.+...++.......
T Consensus 175 ~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPvG--gai~As~~~~~i~~vs 246 (389)
T PF05889_consen 175 EEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPVG--GAIMASFDPSGILAVS 246 (389)
T ss_dssp HHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEESS--HEEEEESSHHHHHHHH
T ss_pred HHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEecCC--CcEEEecCHHHHHHHH
Confidence 99999999999999999999963211 11122 278999999999888887 7788877765544433
No 357
>PRK07481 hypothetical protein; Provisional
Probab=99.13 E-value=9.3e-10 Score=98.28 Aligned_cols=203 Identities=19% Similarity=0.198 Sum_probs=119.4
Q ss_pred CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc---CCccCCC--ccEEEeccccccccCCC
Q 021783 59 PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL---SRPLELG--ADIVMHSATKFIAGHSD 128 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~~~~~--~d~~~~s~~K~~~g~~g 128 (307)
+++.+|+++..+...|...+ ++++.++|++||+++|.||++. .|.. .....+| .|+++ ++|.+++ |
T Consensus 212 ~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~g--G 287 (449)
T PRK07481 212 DTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMC--LAKGITS--G 287 (449)
T ss_pred CcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEE--EeecccC--C
Confidence 56899999988887888764 9999999999999999999985 3222 1222334 46555 7999854 3
Q ss_pred -ceeEEEEEcChhHHHHHHHH-------HHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEec
Q 021783 129 -VMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNY 200 (307)
Q Consensus 129 -~~~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 200 (307)
+.+|.++++++ +.+.+... .........+.....+.+.++.+.. +++.++++.+.+++.+.-. .+
T Consensus 288 ~~Pi~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~--~l-- 360 (449)
T PRK07481 288 YVPLGATMVNAR-IADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVR--EDLPANAAKRGAYLLEGLQ--PL-- 360 (449)
T ss_pred CcCceEEEEcHH-HHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHH--HH--
Confidence 23788888754 54444321 1111222345556666666654432 2334444444444332100 00
Q ss_pred CCCCCCCchHHHhhhccCCCceEEEEeCC-----------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcH
Q 021783 201 AGLPEHPGHELHYSQAKGAGSVLSFLTGS-----------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 269 (307)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~ 269 (307)
.+.++. ....++.|.++.+.+.. ......+...+..+|+.+....
T Consensus 361 --~~~~~~----i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g------------------ 416 (449)
T PRK07481 361 --KERFEL----VGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSG------------------ 416 (449)
T ss_pred --hhcCCC----eEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEecC------------------
Confidence 000110 01125567788877631 1234567777777888765421
Q ss_pred HHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcCC
Q 021783 270 EVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTGP 306 (307)
Q Consensus 270 ~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~~ 306 (307)
+.+|+++.+ +++|+.++.|.++++++.
T Consensus 417 ----------~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 417 ----------TKIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred ----------CEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 127777654 788888899998887764
No 358
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.12 E-value=2.1e-10 Score=101.96 Aligned_cols=207 Identities=12% Similarity=0.112 Sum_probs=116.6
Q ss_pred hHHHHhhcC---CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCC---cCCccCCC----ccE
Q 021783 50 LDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPV---LSRPLELG----ADI 114 (307)
Q Consensus 50 ~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~---~~~~~~~~----~d~ 114 (307)
++++++.+. .++.+|+++......|...+ +++|.++|++||+++|.||++. .|. ......+| .|+
T Consensus 238 l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi 317 (464)
T TIGR00699 238 LEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDM 317 (464)
T ss_pred HHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCE
Confidence 455666664 46899999998888898886 9999999999999999999984 222 11112223 566
Q ss_pred EEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCC
Q 021783 115 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR 194 (307)
Q Consensus 115 ~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~ 194 (307)
.+++|.+++ +|+++.+ +.+.. .............+..+..+.+.++.+.. +++.++++.+.+++++.-.
T Consensus 318 --~t~gK~lg~-----gG~~~~~-~~~~~-~~~~~~~~T~~gnp~~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~ 386 (464)
T TIGR00699 318 --VTFSKKFQT-----AGYFFHD-PAFRP-NKPYRQFNTWMGDPSRALILREIIQEIKR--KDLLENVAHVGDYLYTGLE 386 (464)
T ss_pred --EEehhhhcc-----CCccccc-hhccC-CCCcccccCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH
Confidence 557999842 3444333 21110 00011112223344555565555554432 3344455443333332100
Q ss_pred ccEEecCCCCCCCchHHHhhhcc--CCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHH
Q 021783 195 VKKVNYAGLPEHPGHELHYSQAK--GAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVR 272 (307)
Q Consensus 195 ~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~ 272 (307)
.+ ...+|.. ....+ +.|.++.+.+.+...+..+.+.+..+|+.+...
T Consensus 387 --~l----~~~~~~~---i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~~~Gvl~~~~---------------------- 435 (464)
T TIGR00699 387 --DL----QKKYPEF---IQNLRGKGRGTFIAWDTPDEAKRDKLLKKARNNGVNIGGC---------------------- 435 (464)
T ss_pred --HH----HHhCCCc---eeeecccCeEEEEEEecCCHHHHHHHHHHHHHCCcEEecC----------------------
Confidence 00 0001100 00113 568888898876555778888888888876531
Q ss_pred HhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 273 QARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 273 ~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
+.+.+|+++.+.-.++.++.+.++|+
T Consensus 436 -----g~~~ir~~Ppl~it~~eid~~~~~l~ 461 (464)
T TIGR00699 436 -----GVKAIRLRPMLVFQKHHADIFLEIIS 461 (464)
T ss_pred -----CCCeEEEeCCCCCCHHHHHHHHHHHH
Confidence 12449999987555555555554443
No 359
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.11 E-value=2.2e-08 Score=83.03 Aligned_cols=184 Identities=19% Similarity=0.198 Sum_probs=115.2
Q ss_pred cHHHHHHHhcCCCCeEEE---cCCCCcchHHHHhhhcccCCcEEEEecC-----------CChHHHHhhcC-CCceEEEE
Q 021783 2 AALAAVTHLLGTGEEIVA---GDDLYGGTDRLLSRVTPKTGVVVKRVNT-----------CDLDEVASAIG-PWTKLVWV 66 (307)
Q Consensus 2 aal~~~~~~~~~gd~Vlv---~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----------~d~~~l~~~l~-~~~~~v~~ 66 (307)
|++++..++++|+|+|.- |+..|-+.-.. .-.+..-+.-+++.. .|-|.|++... -++++|+.
T Consensus 118 ANfavYtall~Ph~RiMGLDLP~GGHLsHGy~--T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iia 195 (477)
T KOG2467|consen 118 ANFAVYTALLKPHERIMGLDLPSGGHLSHGYQ--TPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIA 195 (477)
T ss_pred hhhHHHhhhcCCCCeeeeccCCCCCccccccc--cCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEe
Confidence 456778889999999984 44444333211 101111122222221 16788877654 57887775
Q ss_pred eCCCCCccccccHHHHHHHHHHcCCEEEEeCccC-----CCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChh-
Q 021783 67 ESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM-----SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER- 140 (307)
Q Consensus 67 ~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~-----~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~- 140 (307)
-... ....+|.+++.++|.+.|++++.|=+|- .+..+++.++ +|++++++||.+.||+ +|++..|+-.
T Consensus 196 G~Sa--Y~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey-~DiVTTTTHKsLRGPR---g~mIFyRkGvk 269 (477)
T KOG2467|consen 196 GTSA--YSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY-CDIVTTTTHKSLRGPR---GAMIFYRKGVK 269 (477)
T ss_pred cccc--chhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc-cceeeccccccccCCc---ceeEEEeccCC
Confidence 4333 3467899999999999999999999984 5566777775 9999999999998776 7988887521
Q ss_pred -------------HHHHHHHH---HHhcCCCCC---hhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCC
Q 021783 141 -------------LAKELYFL---QNAEGSGLA---PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP 193 (307)
Q Consensus 141 -------------~~~~~~~~---~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~ 193 (307)
+.+.+... ..+.|.... ..+..+-.+.-..+....++..+|++.+.+.|..+.
T Consensus 270 ~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~G 341 (477)
T KOG2467|consen 270 SIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRG 341 (477)
T ss_pred cCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 11111111 011111111 112222222334567778888999999999998763
No 360
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.11 E-value=1.1e-09 Score=97.96 Aligned_cols=221 Identities=13% Similarity=0.100 Sum_probs=124.3
Q ss_pred EEEecCCChHHHHhhcC---CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccCCCCcC----CccCC
Q 021783 42 VKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLS----RPLEL 110 (307)
Q Consensus 42 ~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~----~~~~~ 110 (307)
+..++.+|++++++.+. .++.+|+++......|.+.+ +++|.++|++||+++|+||++. |... ....+
T Consensus 225 ~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t-GfR~g~~ga~~~~ 303 (474)
T PLN02482 225 TLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT-GFRIAYGGAQEYF 303 (474)
T ss_pred eEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CeecCcchHhHHh
Confidence 45567789999998885 46789999988888888775 7799999999999999999984 3211 11123
Q ss_pred CccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH-hcCCC--CChhhHHHHhhccccHHH--HHHHHHHHHHHH
Q 021783 111 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEGSG--LAPFDCWICLRGVKTMAL--RVEKQQDNAQKI 185 (307)
Q Consensus 111 ~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l 185 (307)
|..--+.+++|.+++ |...|.+.++++ +.+.+..... ..+++ ..+.......+.++.++. ..++..+..+.+
T Consensus 304 gv~PDi~t~gK~lgg--G~Pigav~g~~e-i~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l 380 (474)
T PLN02482 304 GITPDLTTLGKVIGG--GLPVGAYGGRRE-IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKL 380 (474)
T ss_pred CCCCCEEEecchhhC--CCceEEEEEcHH-HHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 432223568999953 455788877744 5444431111 11112 234444445555544422 233334444445
Q ss_pred HHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC-------------CHHHHHHHHhcCCcceeecCCCCc
Q 021783 186 AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------------SLALSKHVVETTKYFSITVSFGSV 252 (307)
Q Consensus 186 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~~gi~v~~g~~ 252 (307)
.+.|++... ...++.. ..+.++++.+.+. +.+....+.+.+.++|+.+.....
T Consensus 381 ~~~L~~l~~--~~g~~~~------------~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~ 446 (474)
T PLN02482 381 IQGILEAGK--KAGHEMC------------GGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQF 446 (474)
T ss_pred HHHHHHHHH--hcCCCEE------------EcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCC
Confidence 544443210 0000000 0011335444441 122345677778888987754221
Q ss_pred cceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 253 KSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 253 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
.. +++.+.+..+|+|+.++.|.++++++
T Consensus 447 ~~-------------------------~~psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 447 EA-------------------------GFTSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred CC-------------------------CcCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 00 11223333478899999998888653
No 361
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.11 E-value=2.4e-09 Score=95.28 Aligned_cols=206 Identities=16% Similarity=0.109 Sum_probs=120.9
Q ss_pred hHHHHhhcC---CCceEEEEeCCCCCccccc----cHHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCC--CccEEE
Q 021783 50 LDEVASAIG---PWTKLVWVESPTNPRQQIC----DIRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLEL--GADIVM 116 (307)
Q Consensus 50 ~~~l~~~l~---~~~~~v~~~~~~n~tG~~~----~~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~--~~d~~~ 116 (307)
++++++.+. .++.+++++..+...|... .+++|.++|++||+++|+||+++ .|... ....+ ..|+++
T Consensus 205 l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~ 284 (431)
T TIGR03251 205 LRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVA 284 (431)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEE
Confidence 344555553 6789999999888888875 39999999999999999999987 33321 11122 467775
Q ss_pred eccccccccCCCceeEEEEEcChhHHHHHHH-H----HHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHH
Q 021783 117 HSATKFIAGHSDVMAGVLAVKGERLAKELYF-L----QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFL 189 (307)
Q Consensus 117 ~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l 189 (307)
++|.+ + . +|++..+ + +.+.... . ......+..+.....+.+.++.+.. ..++..+..+.+.+.|
T Consensus 285 --~gK~~--~-~--~g~~~~~-~-i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L 355 (431)
T TIGR03251 285 --FGKKT--Q-V--CGIMAGR-R-VDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARL 355 (431)
T ss_pred --ecccC--c-c--ceEEecc-h-HHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 78876 2 1 5666544 2 2111110 0 0111122344555565555654422 1223333334444444
Q ss_pred hcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcH
Q 021783 190 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 269 (307)
Q Consensus 190 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~ 269 (307)
++.. . .++ .+. ...++.|.++.+.+.+.+....+.+.+..+||.+....
T Consensus 356 ~~l~---~-~~~------~~i---~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~g------------------ 404 (431)
T TIGR03251 356 HELA---A-EFP------HLV---SNPRGRGLMCAFDLPSTADRDEVIRQLYREGVLLLGCG------------------ 404 (431)
T ss_pred HHHH---H-hCc------cce---ecccccceeEEEEeCCHHHHHHHHHHHHhCCeEEecCC------------------
Confidence 3210 0 001 000 01145678888888766556778888888899764322
Q ss_pred HHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 021783 270 EVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 270 ~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 304 (307)
.+.+|+++++...++.++.+.+++++
T Consensus 405 ---------~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 405 ---------ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred ---------CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 13399999987777777777777654
No 362
>PRK07046 aminotransferase; Validated
Probab=99.11 E-value=2e-09 Score=96.12 Aligned_cols=99 Identities=23% Similarity=0.268 Sum_probs=73.0
Q ss_pred EEEecCCChHHHHhhcC-CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC----CCCcCCccCCCc
Q 021783 42 VKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM----SPVLSRPLELGA 112 (307)
Q Consensus 42 ~~~v~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~----~~~~~~~~~~~~ 112 (307)
+..++.+|++++++.+. .+..+|+++......|.+.+ ++++.++|++||+++|.||++. .|..........
T Consensus 199 ~~~~~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~~gv~P 278 (453)
T PRK07046 199 TRVVEFNDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTRAHGLEP 278 (453)
T ss_pred eEeeCCCCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhHHhCCCc
Confidence 45566779999999986 57889999988877787765 8999999999999999999985 232211111235
Q ss_pred cEEEeccccccccCCCceeEEEEEcChhHHHHH
Q 021783 113 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 145 (307)
Q Consensus 113 d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~ 145 (307)
|++ ++.|.++| |..+|.+.++++ +.+.+
T Consensus 279 Di~--t~gK~lgg--G~Pi~av~g~~~-i~~~~ 306 (453)
T PRK07046 279 DFL--VVGKPIAG--GVPCAVYGFSAE-LAERA 306 (453)
T ss_pred cce--eehhhhcC--CCcceeeeehHH-HHHHH
Confidence 665 48999964 566898888855 44444
No 363
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.10 E-value=7.7e-10 Score=99.09 Aligned_cols=210 Identities=13% Similarity=0.135 Sum_probs=125.6
Q ss_pred hHHHHhhcC---CCceEEEEeC-CCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CC---CcCCccCCC--ccEE
Q 021783 50 LDEVASAIG---PWTKLVWVES-PTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SP---VLSRPLELG--ADIV 115 (307)
Q Consensus 50 ~~~l~~~l~---~~~~~v~~~~-~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~---~~~~~~~~~--~d~~ 115 (307)
++++++.+. +++.+|+++. ++...|...+ +++|.++|++||+++|.||++. .| .......+| .|++
T Consensus 201 l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv 280 (466)
T PRK07030 201 FAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFL 280 (466)
T ss_pred HHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEE
Confidence 455666664 5788999998 5776777654 9999999999999999999985 33 222223344 4666
Q ss_pred EeccccccccCCC-ceeEEEEEcChhHHHHHHHH-------HHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHH
Q 021783 116 MHSATKFIAGHSD-VMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAE 187 (307)
Q Consensus 116 ~~s~~K~~~g~~g-~~~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 187 (307)
+ +.|.++| | +.+|.++++++ +.+.+..- .........+..+..+.+.++.+++ +++.++++.+.+
T Consensus 281 ~--~gKgl~g--G~~Pi~av~~~~e-i~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~--~~l~~~~~~~G~ 353 (466)
T PRK07030 281 C--LSKALTG--GYLPLAAVLTTDT-VYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQ--DNVIENNRALAR 353 (466)
T ss_pred e--eehhccC--CcccceEEEecHH-HHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHH
Confidence 5 6998853 4 34888888755 44433210 1112223455666666666665533 334555555555
Q ss_pred HHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH-----------HHHHHHHhcCCcceeecCCCCcccee
Q 021783 188 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----------ALSKHVVETTKYFSITVSFGSVKSLI 256 (307)
Q Consensus 188 ~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~gi~v~~g~~~~~~ 256 (307)
++.+.-. . +..+|.+ ...++.|.++.+.+... .....+.+.+..+|+.+....
T Consensus 354 ~l~~~L~--~-----l~~~~~v----~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g----- 417 (466)
T PRK07030 354 RMAEATA--H-----LADHPHV----AEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPLG----- 417 (466)
T ss_pred HHHHHHH--H-----HhcCCCE----EEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEecC-----
Confidence 5443210 0 0011110 11256677888877311 113467777777888664311
Q ss_pred ecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 257 SMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 257 ~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
+.+|+.+.+ ++++..++.|.++|+++
T Consensus 418 -----------------------~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 418 -----------------------SVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred -----------------------CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 237777654 78888888888888754
No 364
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.09 E-value=6.8e-10 Score=99.43 Aligned_cols=209 Identities=16% Similarity=0.154 Sum_probs=124.9
Q ss_pred hHHHHhhcC---CCceEEEEeC-CCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CC---CcCCccCCC--ccEE
Q 021783 50 LDEVASAIG---PWTKLVWVES-PTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SP---VLSRPLELG--ADIV 115 (307)
Q Consensus 50 ~~~l~~~l~---~~~~~v~~~~-~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~---~~~~~~~~~--~d~~ 115 (307)
++.+++.+. .++.+|+++. .+...|...+ ++++.++|++||+++|.||++. .| .+.....+| .|++
T Consensus 223 ~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv 302 (472)
T PRK08742 223 ADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLL 302 (472)
T ss_pred HHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEE
Confidence 456666663 5788999997 4776787653 9999999999999999999985 33 222233345 4555
Q ss_pred EeccccccccCCC-ceeEEEEEcChhHHHHHHHH---H---HhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHH
Q 021783 116 MHSATKFIAGHSD-VMAGVLAVKGERLAKELYFL---Q---NAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEF 188 (307)
Q Consensus 116 ~~s~~K~~~g~~g-~~~G~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 188 (307)
+ ++|.++| | +..|.++++++ +.+.+... . ........+..+..+.+.++.+.. +++.++++++.++
T Consensus 303 ~--~gKgl~g--G~~Plaav~~~~e-i~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~--~~l~~~~~~~g~~ 375 (472)
T PRK08742 303 C--LSKGLTG--GFLPLSAVLATQQ-LYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFAD--DDVIARNQPTAAR 375 (472)
T ss_pred E--EcccccC--CCCCcceeeccHH-HHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHH--CCHHHHHHHHHHH
Confidence 5 7999853 3 23777777754 44433211 0 111222345666666666654432 3445555555555
Q ss_pred HhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH-----------HHHHHHHhcCCcceeecCCCCccceee
Q 021783 189 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----------ALSKHVVETTKYFSITVSFGSVKSLIS 257 (307)
Q Consensus 189 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~gi~v~~g~~~~~~~ 257 (307)
++.... .+..++.+ ...++.|.++.+.+... .....+.+.+.++|+.+....
T Consensus 376 l~~~~~-------~~~~~~~i----~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g------ 438 (472)
T PRK08742 376 MTQLAA-------QIGEHPHV----ADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLG------ 438 (472)
T ss_pred HHHHHH-------HHhcCCCe----eeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEecC------
Confidence 543210 01111110 12266788888877311 113556777777888664311
Q ss_pred cccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 258 MPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 258 ~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+.+|+.+.+ +++++.++.|.++|++
T Consensus 439 ----------------------~vi~~~PpL~it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 439 ----------------------DVLYWMPPYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred ----------------------CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 238888865 7888888888888864
No 365
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.07 E-value=6.2e-10 Score=99.57 Aligned_cols=208 Identities=16% Similarity=0.207 Sum_probs=120.5
Q ss_pred HHHHhhcC--CCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCC--ccEEEecc
Q 021783 51 DEVASAIG--PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELG--ADIVMHSA 119 (307)
Q Consensus 51 ~~l~~~l~--~~~~~v~~~~~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~--~d~~~~s~ 119 (307)
+++++.+. +++.+|+++.+++..+...| +++|.++|++||+++|.||++. .|..- ....+| .|+++ +
T Consensus 218 ~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~--~ 295 (459)
T PRK06082 218 DYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILC--I 295 (459)
T ss_pred HHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEE--e
Confidence 45677664 46789999988776333444 9999999999999999999986 22221 112233 57776 8
Q ss_pred ccccccCCC-ceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCcc
Q 021783 120 TKFIAGHSD-VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVK 196 (307)
Q Consensus 120 ~K~~~g~~g-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~ 196 (307)
+|.+++ | +.+|.++++++ +................+..+..+.+.++.+.. ..++..+..+.+.+.|++...
T Consensus 296 gKgl~g--G~~P~~av~~~~~-i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~-- 370 (459)
T PRK06082 296 GKGLGG--GLVPIAAMITKDK-YNTAAQISLGHYTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKA-- 370 (459)
T ss_pred cccccC--CCCcceEEEEcHH-HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHh--
Confidence 999964 3 34788888754 333221100112233445566666666655432 123333333334444432110
Q ss_pred EEecCCCCCCCchHHHhhhccCCCceEEEEeCC--------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCc
Q 021783 197 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIP 268 (307)
Q Consensus 197 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~ 268 (307)
.++.+. ..++.|.++.+.+.. .+....+...+.++|+.+...
T Consensus 371 --~~~~i~----------~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~------------------ 420 (459)
T PRK06082 371 --KYPLIG----------DVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVS------------------ 420 (459)
T ss_pred --hCCCee----------eeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEec------------------
Confidence 001111 125677888887731 122456667777778765431
Q ss_pred HHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 269 VEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 269 ~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
..+.+|+++.+ +++++.++.|.+++.+
T Consensus 421 ---------~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~ 451 (459)
T PRK06082 421 ---------QGNVIQLSPPLIITREELTQALAILEEAIAK 451 (459)
T ss_pred ---------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 12348888754 7888888888888764
No 366
>PRK06148 hypothetical protein; Provisional
Probab=99.07 E-value=1.1e-09 Score=106.46 Aligned_cols=207 Identities=19% Similarity=0.181 Sum_probs=125.1
Q ss_pred CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc----CCccCCCccEEEeccccccccCCCc
Q 021783 59 PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL----SRPLELGADIVMHSATKFIAGHSDV 129 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~----~~~~~~~~d~~~~s~~K~~~g~~g~ 129 (307)
.++.+|+++......|.+.+ ++++.++|++||+++|.||++. .|.. .....+|+.--+.++.|.+++ |.
T Consensus 783 ~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lgg--G~ 860 (1013)
T PRK06148 783 RGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGN--GH 860 (1013)
T ss_pred CceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecccccC--Cc
Confidence 46889999988887888775 9999999999999999999984 3322 222334544344557999964 55
Q ss_pred eeEEEEEcChhHHHHHHHHH-HhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc
Q 021783 130 MAGVLAVKGERLAKELYFLQ-NAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 208 (307)
Q Consensus 130 ~~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 208 (307)
.+|.++++++ +.+.+.... ........+..+..+.+.++.+.. +++.+++..+.++|++.-. .+ .+.+|.
T Consensus 861 Plgav~~~~e-i~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~--e~l~~~~~~~G~~l~~~L~--~l----~~~~~~ 931 (1013)
T PRK06148 861 PMGAVVTTRE-IADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIED--EDLQRNALEIGNYLLAGLR--EL----QDRFDI 931 (1013)
T ss_pred ceEEEEEcHH-HHhhccCCCccccCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHH--HH----HHhCCC
Confidence 6899888844 544332111 112223445666666666655432 2344555544444432210 00 000110
Q ss_pred hHHHhhhccCCCceEEEEeCC--------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCC
Q 021783 209 HELHYSQAKGAGSVLSFLTGS--------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTED 280 (307)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 280 (307)
+ ...++.|.++.+.+.. .+....+.+.+..+||.+...+. ..+
T Consensus 932 i----~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~-------------------------~~~ 982 (1013)
T PRK06148 932 I----GDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGP-------------------------HDN 982 (1013)
T ss_pred c----eEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCC-------------------------CCC
Confidence 0 0125567788887731 23356778888888997754221 134
Q ss_pred eEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 281 LVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 281 ~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
.+|+.+.+ +++|+.++.|.++|+++
T Consensus 983 vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 983 VLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred EEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 58888875 78888888888887653
No 367
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=2e-09 Score=89.87 Aligned_cols=125 Identities=17% Similarity=0.222 Sum_probs=98.1
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCC-------------ceEEEEeCCCC
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPW-------------TKLVWVESPTN 71 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~-------------~~~v~~~~~~n 71 (307)
.++.++.+.||-|.+......+.. ..++...-.+.++.++|.+++++.+..+ -+.|+++....
T Consensus 169 S~ipafsKrGDIi~~de~~nfaIq----~GlqlSRS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~ 244 (467)
T KOG1358|consen 169 SAIPAFSKRGDIIFVDEAVNFAIQ----KGLQLSRSTISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYA 244 (467)
T ss_pred hcchhhhccCcEEEEehhhhHHHH----HHHhhhhheeEEecCCCHHHHHHhccCcchhhhhccccccceEEEEEEeecc
Confidence 467788999999998887665655 5566677889999999999998887622 24566777777
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccCCCCcCC----------ccCCCccEEEeccccccccCCCceeEEEEEc
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR----------PLELGADIVMHSATKFIAGHSDVMAGVLAVK 137 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~----------~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~ 137 (307)
++|.++|+.+|.++..+|...+|.|+.++.|.... ......|++++|+.-.+++ + +|+.+++
T Consensus 245 N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas--~--GgFc~G~ 316 (467)
T KOG1358|consen 245 NTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALAS--G--GGFCAGK 316 (467)
T ss_pred CCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccc--c--Cceeecc
Confidence 89999999999999999999999999998665431 1122579999999998853 3 6888885
No 368
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.06 E-value=5.5e-09 Score=84.36 Aligned_cols=142 Identities=24% Similarity=0.339 Sum_probs=103.5
Q ss_pred HH-HHHHHhcCCCCeEE-EcCCCCcchHHHHh------hhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeC-
Q 021783 3 AL-AAVTHLLGTGEEIV-AGDDLYGGTDRLLS------RVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVES- 68 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vl-v~~~~~~~~~~~~~------~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~- 68 (307)
|+ .++..+++|||+.+ +..-.|......+. .-++.+|+...-+|+. |.+.+...++++||+|.++-
T Consensus 95 AI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS 174 (416)
T COG4100 95 AIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRS 174 (416)
T ss_pred HHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeecccccCCcccHHHHHHhcCccceEEEEEec
Confidence 45 56667899999998 44444544432221 2234567888888874 89999999999999999872
Q ss_pred C---CCCccccccHHHHHHHHHHc--CCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 69 P---TNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 69 ~---~n~tG~~~~~~~l~~~~~~~--~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
- .-|+=.+.+++++..+.++. |+++++|++|+...-. .+-+-|+|++.+|+-|.-+|.--.-+|++.++.+.+.
T Consensus 175 ~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve 254 (416)
T COG4100 175 KGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVE 254 (416)
T ss_pred cCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhccCccccchhhhccceeeCCCCceeeccceeechHHHHH
Confidence 2 22444444688888888887 6999999999987754 7778899999999999876543334899999977665
Q ss_pred HH
Q 021783 143 KE 144 (307)
Q Consensus 143 ~~ 144 (307)
..
T Consensus 255 ~~ 256 (416)
T COG4100 255 AA 256 (416)
T ss_pred hh
Confidence 44
No 369
>PRK06917 hypothetical protein; Provisional
Probab=99.06 E-value=1.6e-09 Score=96.73 Aligned_cols=216 Identities=13% Similarity=0.136 Sum_probs=122.1
Q ss_pred hHHHHhhcC----CCceEEEEeCCCCCc-ccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc---CCccCCC--ccE
Q 021783 50 LDEVASAIG----PWTKLVWVESPTNPR-QQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL---SRPLELG--ADI 114 (307)
Q Consensus 50 ~~~l~~~l~----~~~~~v~~~~~~n~t-G~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~~~~~--~d~ 114 (307)
++.+++.++ +++.+|+++...... |.+.+ +++|.++|++||+++|.||++. .|.. .....++ .|+
T Consensus 185 ~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi 264 (447)
T PRK06917 185 ATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDI 264 (447)
T ss_pred HHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCE
Confidence 356666664 368899999876533 45543 9999999999999999999985 2221 1112334 465
Q ss_pred EEeccccccccCCCc-eeEEEEEcChhHHHHHHHHH----HhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHH
Q 021783 115 VMHSATKFIAGHSDV-MAGVLAVKGERLAKELYFLQ----NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAE 187 (307)
Q Consensus 115 ~~~s~~K~~~g~~g~-~~G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~ 187 (307)
.+++|.+++ |. .+|.++++++ +.+.+.... ........+.....+.+.++.+.. ..++..+.-+.+.+
T Consensus 265 --~~~gK~l~~--G~~Pi~a~~~~~~-i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~ 339 (447)
T PRK06917 265 --MTLGKGLGA--GYTPIAATVVSDR-VMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIK 339 (447)
T ss_pred --EEeeehhcc--CCcceEEEEEcHH-HHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 457999964 32 3788888754 444433211 111223445566666666655432 12222333333333
Q ss_pred HHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-----------HHHHHHHHhcCCcceeecCCCCcccee
Q 021783 188 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----------LALSKHVVETTKYFSITVSFGSVKSLI 256 (307)
Q Consensus 188 ~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~gi~v~~g~~~~~~ 256 (307)
.|++... .++.+. ..++.|.++.+.+.. .+....+.+.+.++|+.+.......
T Consensus 340 ~L~~l~~----~~~~i~----------~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~-- 403 (447)
T PRK06917 340 GLQKVQQ----QSTIIG----------DVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQ-- 403 (447)
T ss_pred HHHHHHh----cCCCEE----------EEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEeccccc--
Confidence 3332210 011111 125567788887721 1235677778888888775421100
Q ss_pred ecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 257 SMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 257 ~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
.|...+.+|+++.+ +|++..++.|.+++++
T Consensus 404 ------------------~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 404 ------------------DGKEGDAVIIAPPMTITYSELDELLSIFAKSVEE 437 (447)
T ss_pred ------------------CCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 11123569998874 7788888888877754
No 370
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.06 E-value=5.2e-10 Score=96.96 Aligned_cols=217 Identities=15% Similarity=0.167 Sum_probs=129.1
Q ss_pred hHHHHhhcC----CCceEEEEeCCCCC-cccccc----HHHHHHHHHHcCCEEEEeCccC----CCCcCCccCCCccEEE
Q 021783 50 LDEVASAIG----PWTKLVWVESPTNP-RQQICD----IRKIAEMAHAHGALLLVDNSIM----SPVLSRPLELGADIVM 116 (307)
Q Consensus 50 ~~~l~~~l~----~~~~~v~~~~~~n~-tG~~~~----~~~l~~~~~~~~~~li~D~a~~----~~~~~~~~~~~~d~~~ 116 (307)
.++|++.+. .+..+++++....- .|...+ ++++.++|++||+++|.||+-. .|.+.....+|+.--+
T Consensus 200 a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi 279 (449)
T COG0161 200 ADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDI 279 (449)
T ss_pred HHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCe
Confidence 345666654 56788899887666 777764 9999999999999999999963 3444445555654444
Q ss_pred eccccccccCCCceeEEEEEcChhHHHHHHHH-----HHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhc
Q 021783 117 HSATKFIAGHSDVMAGVLAVKGERLAKELYFL-----QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLAS 191 (307)
Q Consensus 117 ~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~ 191 (307)
-+++|.+.+ .-+..|.++++++ +.+.+..- .....++-.+..+..++++++-++. +.+.++.+.+..+|.+
T Consensus 280 ~~~aKGLT~-GY~Pl~a~l~~~~-I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~--e~l~~~~~~~~~~l~~ 355 (449)
T COG0161 280 LCLAKGLTG-GYLPLSAVLTSDR-IYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEE--EDLLERVAEIGAYLQA 355 (449)
T ss_pred eeecccccc-cchhhHhHhhhHH-HHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHH
Confidence 448898842 2333555666644 44443322 1222345566888888888876543 3344444444444332
Q ss_pred CCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH---------HHHHHHHhcCCcceeecCCCCccceeeccccc
Q 021783 192 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL---------ALSKHVVETTKYFSITVSFGSVKSLISMPCFM 262 (307)
Q Consensus 192 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~ 262 (307)
.-. +.+..+|.+ .+.++.|.+..+.+... .....+...+.++|+.+++.+..-...+|
T Consensus 356 ~L~------~~l~~~p~V----gdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g~~i~~~PP--- 422 (449)
T COG0161 356 GLQ------AALADHPLV----GDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLGDVIYLMPP--- 422 (449)
T ss_pred HHH------HhcccCCcE----EEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecCCEEEEcCC---
Confidence 210 001111111 01245566666766221 22667788888899999976432223344
Q ss_pred CCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 021783 263 SHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 304 (307)
+.+..++++++++.+.++++.
T Consensus 423 ---------------------liit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 423 ---------------------LIITREEIDELVDALREALDE 443 (449)
T ss_pred ---------------------ccCCHHHHHHHHHHHHHHHHH
Confidence 223347899999999998874
No 371
>PRK07480 putative aminotransferase; Validated
Probab=99.04 E-value=2.4e-09 Score=95.78 Aligned_cols=207 Identities=14% Similarity=0.087 Sum_probs=121.9
Q ss_pred HHHHhhcC----CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc---CCccCCCccEEEec
Q 021783 51 DEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL---SRPLELGADIVMHS 118 (307)
Q Consensus 51 ~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~~~~~~d~~~~s 118 (307)
+.+++.+. .++.+|+++..+...|...+ +++|.++|++||+++|.||++. .|.. .....+|+.--+.+
T Consensus 206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~ 285 (456)
T PRK07480 206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMT 285 (456)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeee
Confidence 55555442 57889999988887788765 9999999999999999999984 3322 22233454333455
Q ss_pred cccccccCCCc-eeEEEEEcChhHHHHHHH----HHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHH-----HHHHHH
Q 021783 119 ATKFIAGHSDV-MAGVLAVKGERLAKELYF----LQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNA-----QKIAEF 188 (307)
Q Consensus 119 ~~K~~~g~~g~-~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~l~~~ 188 (307)
++|.++| |. .+|.++++++ +.+.+.. .......+..+..+..+.+.++.++. +.+.+++ +.+.+.
T Consensus 286 ~gK~l~g--G~~Pi~av~~~~~-i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~--~~l~~~~~~~~g~~l~~~ 360 (456)
T PRK07480 286 IAKGLTS--GYIPMGAVGVGDR-VAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRD--EGIVERVRDDTGPYLQKR 360 (456)
T ss_pred eehhhcc--CCccceEEEEcHH-HHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHH
Confidence 8999864 32 3677777744 5444421 11112234445666676666665532 2233333 334444
Q ss_pred HhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH-----------HHHHHHHhcCCcceeecCCCCccceee
Q 021783 189 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----------ALSKHVVETTKYFSITVSFGSVKSLIS 257 (307)
Q Consensus 189 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~gi~v~~g~~~~~~~ 257 (307)
+++.. . ++.+. ..++.|.++.+.+... .....+...+.++|+.+....
T Consensus 361 l~~l~---~--~~~i~----------~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~------ 419 (456)
T PRK07480 361 LRELA---D--HPLVG----------EVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAVG------ 419 (456)
T ss_pred HHHhh---c--CCCee----------eEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeecC------
Confidence 43211 0 11111 1255677888877211 112455666777788664311
Q ss_pred cccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 258 MPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 258 ~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
+.+|+++.+ +++|+.++.|.++|+++
T Consensus 420 ----------------------~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 420 ----------------------DRMIISPPLVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred ----------------------CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 237888865 78888888888887653
No 372
>PRK07483 hypothetical protein; Provisional
Probab=99.04 E-value=1.3e-09 Score=97.24 Aligned_cols=217 Identities=17% Similarity=0.170 Sum_probs=123.6
Q ss_pred HHHHhhcC----CCceEEEEeCCCC-Ccccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc---CCccCCC--ccEE
Q 021783 51 DEVASAIG----PWTKLVWVESPTN-PRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL---SRPLELG--ADIV 115 (307)
Q Consensus 51 ~~l~~~l~----~~~~~v~~~~~~n-~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~~~~~--~d~~ 115 (307)
+++++.+. +++.+|+++..+. ..|...+ +++|.++|++||+++|.||++. .|.. .....+| .|++
T Consensus 186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv 265 (443)
T PRK07483 186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLV 265 (443)
T ss_pred HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCee
Confidence 55666553 5688999998775 3466654 9999999999999999999985 3222 2222334 4555
Q ss_pred EeccccccccCCCc-eeEEEEEcChhHHHHHHHH----HHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHh
Q 021783 116 MHSATKFIAGHSDV-MAGVLAVKGERLAKELYFL----QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLA 190 (307)
Q Consensus 116 ~~s~~K~~~g~~g~-~~G~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~ 190 (307)
+ ++|.+++ |. .+|.++++++ +.+.+... .........+.....+.+.++.++. +.+.++++.+.++|+
T Consensus 266 ~--~gK~l~g--G~~Pi~av~~~~~-i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~--~~l~~~~~~~g~~l~ 338 (443)
T PRK07483 266 T--IAKGLGA--GYQPIGAVLASDR-IYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAE--DGLLANVRARGEQLR 338 (443)
T ss_pred e--ehhhhcc--CccccEEEEEcHH-HHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHH
Confidence 5 7999854 43 4788888755 44433311 1111223345556666666654432 234444544444443
Q ss_pred cCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-----------HHHHHHHHhcCCcceeecCCCCccceeecc
Q 021783 191 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----------LALSKHVVETTKYFSITVSFGSVKSLISMP 259 (307)
Q Consensus 191 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p 259 (307)
+.-. . ....+|.+ ...++.|.++.+.+.. .+....+.+.+.++|+.+.......
T Consensus 339 ~~L~--~----l~~~~~~i----~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~----- 403 (443)
T PRK07483 339 ARLR--E----RLGQHPHV----GDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTI----- 403 (443)
T ss_pred HHHH--H----HHhcCCCe----eeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccc-----
Confidence 2210 0 00001100 0125667788877621 1224567777888888765321000
Q ss_pred cccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 260 CFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
.+...+.+|+.+.+ +++|+.++.|.++|++
T Consensus 404 ---------------~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 404 ---------------DGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred ---------------cCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 00113459988865 7888888888888764
No 373
>PRK07036 hypothetical protein; Provisional
Probab=99.02 E-value=1.8e-09 Score=96.85 Aligned_cols=202 Identities=12% Similarity=0.128 Sum_probs=120.0
Q ss_pred CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc---CCcc-CCCccEEEeccccccccCCC-
Q 021783 59 PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL---SRPL-ELGADIVMHSATKFIAGHSD- 128 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~~-~~~~d~~~~s~~K~~~g~~g- 128 (307)
+++.+|+++..+...|...+ +++|.++|++||+++|.||++. .|.. .... .+|+.--+.+++|.+++ |
T Consensus 219 ~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~gK~l~g--G~ 296 (466)
T PRK07036 219 DNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTS--GY 296 (466)
T ss_pred CceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEEcccccc--Cc
Confidence 56889999998888888876 9999999999999999999984 3332 2222 23433333457999854 3
Q ss_pred ceeEEEEEcChhHHHHHHHH-------HHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecC
Q 021783 129 VMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 201 (307)
Q Consensus 129 ~~~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 201 (307)
+.+|.++++++ +.+.+... .........+..+..+.+.++.+.. +++.+++..+.++|++.-. .
T Consensus 297 ~Pi~av~~~~~-i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~--~~l~~~~~~~g~~l~~~L~--~---- 367 (466)
T PRK07036 297 QPLGAVIISER-LLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMER--EGLCEHVREVGPYFEERLA--S---- 367 (466)
T ss_pred cccEEEEEcHH-HHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHH--H----
Confidence 23788888755 54444311 1111223445666666666665532 2344444444444432210 0
Q ss_pred CCCCCCchHHHhhhccCCCceEEEEeCC-----------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHH
Q 021783 202 GLPEHPGHELHYSQAKGAGSVLSFLTGS-----------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 270 (307)
Q Consensus 202 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~ 270 (307)
+..+|.+ ...++.|.++.+.+.. .+....+...+..+|+.+....
T Consensus 368 -l~~~~~v----~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~------------------- 423 (466)
T PRK07036 368 -LRELPLV----GDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLE------------------- 423 (466)
T ss_pred -hccCCCE----EEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecC-------------------
Confidence 1111110 1225677888887732 1124567777777888664311
Q ss_pred HHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 271 VRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 271 ~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+.+|+++.+ +++++.++.|.++|++
T Consensus 424 ---------~~~~l~Ppl~it~~~id~~~~~l~~al~~ 452 (466)
T PRK07036 424 ---------HLCVLSPPLIITRAQIDEIVAILRAAIEE 452 (466)
T ss_pred ---------CEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 226777654 7888888888887754
No 374
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.02 E-value=1.4e-09 Score=97.38 Aligned_cols=203 Identities=18% Similarity=0.205 Sum_probs=116.5
Q ss_pred CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-C---CCcCCccCCC--ccEEEeccccccccCCC
Q 021783 59 PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-S---PVLSRPLELG--ADIVMHSATKFIAGHSD 128 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~---~~~~~~~~~~--~d~~~~s~~K~~~g~~g 128 (307)
+++.+|+++..+...|...+ ++++.++|++||+++|.||++. . |.......+| .|+++ ++|.+++ |
T Consensus 224 ~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt--~gK~l~g--G 299 (459)
T PRK06931 224 RKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIV--MSKAVGG--G 299 (459)
T ss_pred CceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEE--ecccccC--C
Confidence 35789999988877787764 9999999999999999999985 3 2222222344 45555 7999854 5
Q ss_pred ceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc
Q 021783 129 VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 208 (307)
Q Consensus 129 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 208 (307)
+.+|.+..+++ . +.+............+..+..+.+.++.+.. +.+.++++.+.++|.+.-. .+ .+.+|.
T Consensus 300 ~Pi~av~~~~~-~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~--~~l~~~~~~~G~~l~~~L~--~l----~~~~~~ 369 (459)
T PRK06931 300 LPLAVLGIKKE-F-DAWQPGGHTGTFRGNQLAMATGLTTLKILKE--ENLAQNAAERGEWLKAQLA--EL----QKRYPC 369 (459)
T ss_pred cceeeeeeHHH-H-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHH--HH----HHhCCC
Confidence 66888777643 3 3221111111223445566666666654422 2333444444443332100 00 000110
Q ss_pred hHHHhhhccCCCceEEEEeCC--------------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHh
Q 021783 209 HELHYSQAKGAGSVLSFLTGS--------------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 274 (307)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~ 274 (307)
....++.|.++.+.+.. .+....+...+..+|+.+..+..
T Consensus 370 ----i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~---------------------- 423 (459)
T PRK06931 370 ----IGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGR---------------------- 423 (459)
T ss_pred ----eEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCC----------------------
Confidence 01225567788887731 12345667777778887653221
Q ss_pred cCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 275 RGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 275 ~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
..+.+|+.+.+ +++++.++.|.++|++
T Consensus 424 ---~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 424 ---NGNVVRLLPPLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred ---CCCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence 12448888875 6777778888777754
No 375
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.01 E-value=2.3e-08 Score=83.74 Aligned_cols=179 Identities=17% Similarity=0.153 Sum_probs=117.9
Q ss_pred CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC----CCCcCCccCCCccEEEeccccccccCCCce
Q 021783 59 PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM----SPVLSRPLELGADIVMHSATKFIAGHSDVM 130 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~----~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~ 130 (307)
....+++.++.+.-.|.+.+ +++..++|+++|.++|.||++. .|.+......++.--+-++.|.++. |..
T Consensus 211 ~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGn--G~P 288 (442)
T KOG1404|consen 211 ETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGN--GFP 288 (442)
T ss_pred CceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHHhhccC--CCc
Confidence 35667778888887777753 9999999999999999999985 4555555666777777789999953 466
Q ss_pred eEEEEEcChhHHHHHHHHH-HhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCch
Q 021783 131 AGVLAVKGERLAKELYFLQ-NAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH 209 (307)
Q Consensus 131 ~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~ 209 (307)
.|.+++.++ +.+.+.... .+....-.+..+....+.++-+++ +++++++..+..+|.+.-....-..+.+-
T Consensus 289 l~AVvtt~E-Ia~v~~~~~~~fnTyggnP~a~avg~aVL~Vike--e~LqE~aa~vG~yl~~~l~~l~d~h~iIG----- 360 (442)
T KOG1404|consen 289 LGAVVTTPE-IADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKE--ENLQENAAEVGSYLLEKLAALKDKHPIIG----- 360 (442)
T ss_pred ceeeecCHH-HHHHHHhccccccccCCCchhHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHhhcCCcee-----
Confidence 888888744 655555443 444455556677777777765543 66777777666665532100000011111
Q ss_pred HHHhhhccCCCceEEEEe-C--------CHHHHHHHHhcCCcceeecCCCCc
Q 021783 210 ELHYSQAKGAGSVLSFLT-G--------SLALSKHVVETTKYFSITVSFGSV 252 (307)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~l~~~gi~v~~g~~ 252 (307)
+.|+.|-++.+.+ + .......+.+++++.|+.+.-|+.
T Consensus 361 -----dVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i 407 (442)
T KOG1404|consen 361 -----DVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGI 407 (442)
T ss_pred -----ecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccc
Confidence 1155667777765 1 223467788899999999977665
No 376
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.01 E-value=1.8e-09 Score=96.73 Aligned_cols=209 Identities=11% Similarity=0.159 Sum_probs=121.7
Q ss_pred hHHHHhhcC---CCceEEEEeC-CCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCC--ccEE
Q 021783 50 LDEVASAIG---PWTKLVWVES-PTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELG--ADIV 115 (307)
Q Consensus 50 ~~~l~~~l~---~~~~~v~~~~-~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~--~d~~ 115 (307)
++.+++.+. +++.+|+++. ++...|.+.+ ++++.++|++||+++|.||++. .|..- ....+| .|++
T Consensus 210 ~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv 289 (460)
T PRK06916 210 LEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIM 289 (460)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCee
Confidence 455666664 5789999998 5777787753 9999999999999999999984 22221 222234 5665
Q ss_pred EeccccccccCCC-ceeEEEEEcChhHHHHHHH-H------HHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHH
Q 021783 116 MHSATKFIAGHSD-VMAGVLAVKGERLAKELYF-L------QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAE 187 (307)
Q Consensus 116 ~~s~~K~~~g~~g-~~~G~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 187 (307)
+++|.++| | +.+|.++++++ +.+.+.. . .........+.....+.+.++.+.. +.+.++++.+.+
T Consensus 290 --~~gK~l~g--G~~Pi~av~~~~e-i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~--~~l~~~~~~~g~ 362 (460)
T PRK06916 290 --TAGKGLTG--GYLPIAITVTTDE-IYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEK--TNLIEQVARKTE 362 (460)
T ss_pred --eeehhhhc--CccccceeeecHH-HHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHH
Confidence 47998853 4 34788888755 4443321 0 1111222345556666666654432 223344444444
Q ss_pred HHhcCC-CccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH-----------HHHHHHHhcCCcceeecCCCCccce
Q 021783 188 FLASHP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----------ALSKHVVETTKYFSITVSFGSVKSL 255 (307)
Q Consensus 188 ~l~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~gi~v~~g~~~~~ 255 (307)
++.+.- .+.. ++.+. ..++.|.++.+.+... .....+...+..+|+.+....
T Consensus 363 ~l~~~l~~l~~--~~~v~----------~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g---- 426 (460)
T PRK06916 363 YVATQLEDLFA--LKHVG----------DIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLG---- 426 (460)
T ss_pred HHHHHHHHhhc--CCCeE----------EeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEecC----
Confidence 333210 0000 11111 1255677777776311 113567777888888765321
Q ss_pred eecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 256 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
+.+|+.+.+ ++++..++.|.++|+++
T Consensus 427 ------------------------~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 427 ------------------------NTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred ------------------------CEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 127777654 78888888888888754
No 377
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.94 E-value=5.5e-08 Score=86.33 Aligned_cols=188 Identities=21% Similarity=0.183 Sum_probs=124.4
Q ss_pred cHHHHHHHh-cCCC----CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC---CCceEEEEeC
Q 021783 2 AALAAVTHL-LGTG----EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG---PWTKLVWVES 68 (307)
Q Consensus 2 aal~~~~~~-~~~g----d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~---~~~~~v~~~~ 68 (307)
|++.++.+. ..+| +..+++...|+... .-+.-.|.+++.|..+ |..+|++... ++-.+++++.
T Consensus 613 aGL~~IRaY~~~kge~hRnvClIPvSAHGTNP----ASA~MagmkvvpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTY 688 (1001)
T KOG2040|consen 613 AGLRVIRAYLESKGEGHRNVCLIPVSAHGTNP----ASAAMAGMKVVPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTY 688 (1001)
T ss_pred hhHHHHHHHHHhccCCcceeEEEeecccCCCh----hhHHhcCCEEEEeeccCCCCccHHHHHHHHHHhhhhhheeEEec
Confidence 455566663 3344 35788888998877 5677789999998874 7777776664 5678999999
Q ss_pred CCCCccccc-cHHHHHHHHHHcCCEEEEeCccCCCC--cCCccCCCccEEEeccccccccCCCc---eeEEEEEcChhHH
Q 021783 69 PTNPRQQIC-DIRKIAEMAHAHGALLLVDNSIMSPV--LSRPLELGADIVMHSATKFIAGHSDV---MAGVLAVKGERLA 142 (307)
Q Consensus 69 ~~n~tG~~~-~~~~l~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~d~~~~s~~K~~~g~~g~---~~G~~~~~~~~~~ 142 (307)
|++ .|... .+++++++.|+||--+..|+|....- +-.+.++|.|+.--.+||+|+-|.|- -+|=+.+++- +.
T Consensus 689 PST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~H-La 766 (1001)
T KOG2040|consen 689 PST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LA 766 (1001)
T ss_pred ccc-cccccccHHHHHHHHHhcCCEEEecCCCccceecccCCccccccceeecccceeeecCCCCCCCCCccchhhh-cc
Confidence 987 47765 59999999999999999999975332 23677889999999999999665550 0233333321 11
Q ss_pred HHHHH-----H--------------HHhcC-CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCc
Q 021783 143 KELYF-----L--------------QNAEG-SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRV 195 (307)
Q Consensus 143 ~~~~~-----~--------------~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~ 195 (307)
..+.. . .++.. ..++...++.-+.+...+....+--.-|+.++.++|+.+-++
T Consensus 767 pfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~hYki 839 (1001)
T KOG2040|consen 767 PFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESHYKI 839 (1001)
T ss_pred ccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhccce
Confidence 10000 0 00000 112223455555566666655566667888899999887643
No 378
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.93 E-value=4e-08 Score=85.16 Aligned_cols=185 Identities=16% Similarity=0.064 Sum_probs=102.8
Q ss_pred HHHHHhcC-CCCeEEEcCC----CCcchHHHHhhhcccCCcEEEEec----------C-----CChHHHHhhcCC----C
Q 021783 5 AAVTHLLG-TGEEIVAGDD----LYGGTDRLLSRVTPKTGVVVKRVN----------T-----CDLDEVASAIGP----W 60 (307)
Q Consensus 5 ~~~~~~~~-~gd~Vlv~~~----~~~~~~~~~~~~~~~~g~~~~~v~----------~-----~d~~~l~~~l~~----~ 60 (307)
.++..+++ |||++.+... .|...+......+...|+.++.++ . .|++++++.|.+ +
T Consensus 104 Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~ 183 (467)
T TIGR02617 104 IYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNN 183 (467)
T ss_pred HHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCC
Confidence 34445667 7887775443 121111111134566787776642 1 289999999973 2
Q ss_pred ceEEEEeCCCC-Ccccccc---HHHHHHHHHHcCCEEEEeCccCC-----------CCcC-Ccc------CCCccEEEec
Q 021783 61 TKLVWVESPTN-PRQQICD---IRKIAEMAHAHGALLLVDNSIMS-----------PVLS-RPL------ELGADIVMHS 118 (307)
Q Consensus 61 ~~~v~~~~~~n-~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~-----------~~~~-~~~------~~~~d~~~~s 118 (307)
.-.+.++-.+| --|...+ ++++.++|++||+.++.|+|--. +... .+. ...+|.++.|
T Consensus 184 i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~s 263 (467)
T TIGR02617 184 VPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMS 263 (467)
T ss_pred ceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEE
Confidence 33333332233 3466664 88999999999999999997311 1111 111 1368999999
Q ss_pred cccccccCCCceeEEEEEcCh---hHHHHHHHHH-HhcC----CCCChhhHHHHhhccccH--HHHHHHHHHHHHHHHHH
Q 021783 119 ATKFIAGHSDVMAGVLAVKGE---RLAKELYFLQ-NAEG----SGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEF 188 (307)
Q Consensus 119 ~~K~~~g~~g~~~G~~~~~~~---~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~ 188 (307)
++|.++.|- +|+++++++ .+.+..+... ...| .+++.-....+..+|+.. ....+......+.|.+.
T Consensus 264 lsKglgApv---Gg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~ 340 (467)
T TIGR02617 264 AKKDAMVPM---GGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNG 340 (467)
T ss_pred cCCCCCCcc---cceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHH
Confidence 999997664 689999988 4433322211 1111 123332222222344321 22334445556677777
Q ss_pred HhcC
Q 021783 189 LASH 192 (307)
Q Consensus 189 l~~~ 192 (307)
|++.
T Consensus 341 L~~~ 344 (467)
T TIGR02617 341 LEEI 344 (467)
T ss_pred HHhC
Confidence 7655
No 379
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.85 E-value=1.1e-08 Score=87.24 Aligned_cols=203 Identities=16% Similarity=0.213 Sum_probs=116.9
Q ss_pred EEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC-----CceEEEEeCC-CCCccccccHHHHHHH
Q 021783 17 IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP-----WTKLVWVESP-TNPRQQICDIRKIAEM 85 (307)
Q Consensus 17 Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~-----~~~~v~~~~~-~n~tG~~~~~~~l~~~ 85 (307)
+-.++..|.+.. .++...|++++.++.+ +.+.|.+++.. -+-.+++.+. ++.+...-++.+|..+
T Consensus 185 ~Y~SDqahssve----ka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~V 260 (511)
T KOG0628|consen 185 AYCSDQAHSSVE----KACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPV 260 (511)
T ss_pred EEecCcccchHH----HhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcch
Confidence 457888887777 6778888999988875 56778777762 1222333232 2222233469999999
Q ss_pred HHHcCCEEEEeCccCCCCc--CCcc--CC---CccEEEeccccccccCCCceeEEEEEcChh------HHHHHHHHHHh-
Q 021783 86 AHAHGALLLVDNSIMSPVL--SRPL--EL---GADIVMHSATKFIAGHSDVMAGVLAVKGER------LAKELYFLQNA- 151 (307)
Q Consensus 86 ~~~~~~~li~D~a~~~~~~--~~~~--~~---~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~------~~~~~~~~~~~- 151 (307)
|+++|+|+++|+||+...+ +... -. .+|-+-+..|||+.-.-. +..++.++.. ..+.+..-...
T Consensus 261 c~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfD--Cs~lWvkd~~~~~~~~~vdp~yL~h~~~ 338 (511)
T KOG0628|consen 261 CREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFD--CSPLWVKDGTKLSRAFNVDPLYLKHAYQ 338 (511)
T ss_pred hhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeee--eecceeecCceeeeeeecChHhhcchhh
Confidence 9999999999999985443 2111 11 368899999998754333 5555555441 11111111111
Q ss_pred ------------cCCCCChhhHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhcc
Q 021783 152 ------------EGSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 217 (307)
Q Consensus 152 ------------~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (307)
.+-..-..-.|+.++ +.+.+..+++++.+.++...+.+.+-+.. ++..+
T Consensus 339 ~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~F--------------E~~~~--- 401 (511)
T KOG0628|consen 339 GSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRF--------------EIVNK--- 401 (511)
T ss_pred ccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcc--------------eeecc---
Confidence 111222334454443 34556666666666666666655544322 11111
Q ss_pred CCCceEEEEeCC-HHHHHHHHhcCCc
Q 021783 218 GAGSVLSFLTGS-LALSKHVVETTKY 242 (307)
Q Consensus 218 ~~~~~~~~~~~~-~~~~~~~~~~l~~ 242 (307)
..-++++|++.+ .+.-+.+++++..
T Consensus 402 ~~lgLvcFRlk~~N~~ne~Ll~~in~ 427 (511)
T KOG0628|consen 402 RILGLVCFRLKGDNEINEALLNRLNS 427 (511)
T ss_pred cccceeEEeecCCcHHHHHHHHHHHh
Confidence 125688998843 3345666766644
No 380
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.81 E-value=9.2e-08 Score=77.70 Aligned_cols=132 Identities=12% Similarity=0.140 Sum_probs=101.3
Q ss_pred HHHHhcCCC---CeEEEcCCCCcchHHHHhhhcccCCcEEEEe----cC------CChHHHHhhcC---CCceEEEEeCC
Q 021783 6 AVTHLLGTG---EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV----NT------CDLDEVASAIG---PWTKLVWVESP 69 (307)
Q Consensus 6 ~~~~~~~~g---d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v----~~------~d~~~l~~~l~---~~~~~v~~~~~ 69 (307)
++..+.+|- -+|+...-.|++-..++...++..|..+... .. ...+++...|. +..++|.++.+
T Consensus 144 Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGv 223 (465)
T KOG3846|consen 144 LLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGV 223 (465)
T ss_pred HHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecc
Confidence 334566664 4799999999998888888889999764322 11 13355555554 45778888899
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEc
Q 021783 70 TNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVK 137 (307)
Q Consensus 70 ~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~ 137 (307)
+..||...|+.+|-..-+..|+++=.|-||+.|..+ ..-+||+|+.+....|+++..+|-++|..+-.
T Consensus 224 qyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHe 292 (465)
T KOG3846|consen 224 QYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHE 292 (465)
T ss_pred eeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEeeecccccCCCccceeeeeh
Confidence 999999999999996666669999999999999887 66678999999999999977677667765543
No 381
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.79 E-value=5.1e-08 Score=82.47 Aligned_cols=172 Identities=15% Similarity=0.145 Sum_probs=119.5
Q ss_pred EEcCCCCcchHHHHhhhcccCC---cEEEEecCC-----ChHHHHhhcC---CC---ceEEEEeCCCCCccccccHHHHH
Q 021783 18 VAGDDLYGGTDRLLSRVTPKTG---VVVKRVNTC-----DLDEVASAIG---PW---TKLVWVESPTNPRQQICDIRKIA 83 (307)
Q Consensus 18 lv~~~~~~~~~~~~~~~~~~~g---~~~~~v~~~-----d~~~l~~~l~---~~---~~~v~~~~~~n~tG~~~~~~~l~ 83 (307)
.+|+.+|.+.. .++.-.| -+++.|+.+ ++++|++.|. .+ +-.|-.+..++.-|..-|++.|+
T Consensus 201 FtSeesHYSi~----kaAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~ia 276 (510)
T KOG0629|consen 201 FTSEESHYSIK----KAAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIA 276 (510)
T ss_pred EecccchhhHH----HHHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHH
Confidence 36777888777 4455555 567777765 7899998885 22 45566666777788888999999
Q ss_pred HHHHHcCCEEEEeCccCCCCcCCccC-------CCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH--------
Q 021783 84 EMAHAHGALLLVDNSIMSPVLSRPLE-------LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------- 148 (307)
Q Consensus 84 ~~~~~~~~~li~D~a~~~~~~~~~~~-------~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~-------- 148 (307)
++|++|++|+++|+|.+.|.+-+... ..++.+..+.||+++.| +.++....+.+-+......+
T Consensus 277 diC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gap--lqCsa~l~r~~gll~~Cn~~~A~YLFq~ 354 (510)
T KOG0629|consen 277 DICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAP--LQCSAFLTREEGLLQRCNQMSAIYLFQQ 354 (510)
T ss_pred HHHHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCc--chhhHHHHHHHHHHHhhcccchhhhhcc
Confidence 99999999999999998766432111 14789999999999643 45777777755432221111
Q ss_pred -------------HHhcCCCCChhhHHHHhhc--cccHHHHHHHHHHHHHHHHHHHhcCCCc
Q 021783 149 -------------QNAEGSGLAPFDCWICLRG--VKTMALRVEKQQDNAQKIAEFLASHPRV 195 (307)
Q Consensus 149 -------------~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~l~~~l~~~~~~ 195 (307)
.-+.|-....+-.|+.+.+ -+.++...++..++++.+.++++++...
T Consensus 355 dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~ 416 (510)
T KOG0629|consen 355 DKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGF 416 (510)
T ss_pred CceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 0012223444567777654 5677888888899999999999988643
No 382
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.79 E-value=2.6e-07 Score=87.40 Aligned_cols=178 Identities=12% Similarity=0.103 Sum_probs=102.4
Q ss_pred CCceEEEEeCC-CCCcccccc----HHHHHHHHHHcCCEEEEeCccC----CCCcCCccCCCccEEEeccccccccCCC-
Q 021783 59 PWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLVDNSIM----SPVLSRPLELGADIVMHSATKFIAGHSD- 128 (307)
Q Consensus 59 ~~~~~v~~~~~-~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~----~~~~~~~~~~~~d~~~~s~~K~~~g~~g- 128 (307)
+++.+++++.. +...|.+.+ ++++.++|++||+++|.||++. .|.+.....+|+.--+.++.|.++| |
T Consensus 583 ~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~gKgLtg--G~ 660 (817)
T PLN02974 583 GHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLTG--GL 660 (817)
T ss_pred CCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeecccccC--CC
Confidence 46789999984 676687764 9999999999999999999985 3333333445554444448999853 4
Q ss_pred ceeEEEEEcChhHHHHHHH------HHHhcCCCCChhhHHHHhhccccHHHH--HHHHHHHHHHHHHHHhcCCCccEEec
Q 021783 129 VMAGVLAVKGERLAKELYF------LQNAEGSGLAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLASHPRVKKVNY 200 (307)
Q Consensus 129 ~~~G~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~~~ 200 (307)
+.+|.++++++ +.+.+.. .......+..+..+..+.+.++.++.. .+++.++...+.+.+++.- .
T Consensus 661 ~Plaa~l~~~~-I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l------~ 733 (817)
T PLN02974 661 VPLAATLATEE-VFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEEL------V 733 (817)
T ss_pred CccEEEEEcHH-HHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHH------H
Confidence 34788888744 5554431 112223345566777777776655331 2234444444433332110 0
Q ss_pred CCCCCCCchHHHhhhccCCCceEEEEeCCH--------HHHHHHHhcCC-cceeecCC
Q 021783 201 AGLPEHPGHELHYSQAKGAGSVLSFLTGSL--------ALSKHVVETTK-YFSITVSF 249 (307)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~-~~gi~v~~ 249 (307)
..+..+|.+ ...++.|.++.+.+... ..+..+.+.+. .+|+.+++
T Consensus 734 ~~l~~~p~V----~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~ 787 (817)
T PLN02974 734 RAISSLPNV----ERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARP 787 (817)
T ss_pred HHHhhCCCe----eEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEe
Confidence 000011110 01245677778877321 22456666777 78887764
No 383
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.78 E-value=1.2e-07 Score=84.55 Aligned_cols=95 Identities=18% Similarity=0.161 Sum_probs=65.4
Q ss_pred EEEecCCChHHHHhhcC---CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCCcCC---cc-CCCccE
Q 021783 42 VKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR---PL-ELGADI 114 (307)
Q Consensus 42 ~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~---~~-~~~~d~ 114 (307)
+..++.+|++++++.+. .++++|+++......+..-.+++|.++|++||+++|+||++. |.... .. .++...
T Consensus 166 ~~~~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t-G~~~~~~g~~~~~gv~P 244 (431)
T PRK06209 166 TVTFRYNDIASLEALFEDHPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMIT-GFRWHMRGAQKLYGIVP 244 (431)
T ss_pred ccccCCCCHHHHHHHHHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc-cCCcCcchhhHHhCCCc
Confidence 34456679999998885 457788888765543333349999999999999999999983 33211 11 134333
Q ss_pred EEeccccccccCCCceeEEEEEcCh
Q 021783 115 VMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 115 ~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
-+.+++|.+++ |..+|+++++++
T Consensus 245 Di~t~gK~lgg--G~p~~av~~~~~ 267 (431)
T PRK06209 245 DLSCFGKALGN--GFAVSALAGKRE 267 (431)
T ss_pred ceeeehhhhcC--CcccEEEEEHHH
Confidence 34668999964 445888888754
No 384
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.78 E-value=1.6e-06 Score=70.80 Aligned_cols=250 Identities=16% Similarity=0.199 Sum_probs=143.1
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCC-cEEEEecC-------CChHHHHhhcC--CCceEEEEe-CCCCCcccccc---
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTG-VVVKRVNT-------CDLDEVASAIG--PWTKLVWVE-SPTNPRQQICD--- 78 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g-~~~~~v~~-------~d~~~l~~~l~--~~~~~v~~~-~~~n~tG~~~~--- 78 (307)
+..+|-+++|+|.... ..++..| .++...+. .|++.+...+. +...++++. ..+||||.-..
T Consensus 124 ~~~~VY~SnPTW~nH~----~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQ 199 (410)
T KOG1412|consen 124 NKNTVYVSNPTWENHH----AIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQ 199 (410)
T ss_pred ccceeEecCCchhHHH----HHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHH
Confidence 4678999999998888 4556667 33333332 27888877776 333445554 35999998875
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCc--CCccC--------CCc-cEEEeccccccccCCCceeEEEEE--cChhHHH--
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVL--SRPLE--------LGA-DIVMHSATKFIAGHSDVMAGVLAV--KGERLAK-- 143 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~--~~~~~--------~~~-d~~~~s~~K~~~g~~g~~~G~~~~--~~~~~~~-- 143 (307)
-.+|++..++.+...+.|-+|-.... ++.+. .|. -+++.||+|.+ |.-+-|.|.+.. +++....
T Consensus 200 W~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNf-GlYneRvGnltvv~~n~a~i~~v 278 (410)
T KOG1412|consen 200 WKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNF-GLYNERVGNLTVVVNNPAVIAGV 278 (410)
T ss_pred HHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhc-ccccccccceEEEecChhHHHHH
Confidence 55677777888999999999842221 12222 233 58999999999 677778885543 4444332
Q ss_pred --HHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 144 --ELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 144 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
.+....+...+.++...+.....-|.. .++.+++.+..+.+..++++.+.-..-....|. .|+ .| ..-.++.+
T Consensus 279 ~SQl~lviR~~~SNPPAyGArIV~kvL~t-P~lre~W~~sik~MssRI~~MR~aLrd~L~aL~-TPG--tW-DHI~~QiG 353 (410)
T KOG1412|consen 279 KSQLTLVIRSNWSNPPAYGARIVHKVLST-PELREQWIQSIKTMSSRIKKMRTALRDHLVALK-TPG--TW-DHITQQIG 353 (410)
T ss_pred HHHHHHHHhhccCCCcchhhHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCC--cH-HHHHhhcc
Confidence 233333444445555555554444433 334455555555555554433200000000111 111 01 11122467
Q ss_pred eEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec---cCChHHHHHHH
Q 021783 222 VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IEDVNDLISDL 298 (307)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~---~~~~~~~i~~l 298 (307)
+|++.=-.....+.+.+..+.. ..+ + =||+++ ..++|++.+.+
T Consensus 354 MFSyTGLtp~qV~~li~~h~vy--Ll~------------------------------~--GRInisGLN~~NveyVAkAI 399 (410)
T KOG1412|consen 354 MFSYTGLTPAQVDHLIENHKVY--LLS------------------------------D--GRINISGLNMKNVEYVAKAI 399 (410)
T ss_pred ceeecCCCHHHHHHHHHhceEE--Eec------------------------------C--CcEeeeccccccHHHHHHHH
Confidence 7777655555567776655432 111 1 356663 37899999999
Q ss_pred HHHHhcCC
Q 021783 299 DKALRTGP 306 (307)
Q Consensus 299 ~~~l~~~~ 306 (307)
.++.+.+.
T Consensus 400 de~Vr~~~ 407 (410)
T KOG1412|consen 400 DETVRAIK 407 (410)
T ss_pred HHHHHhhc
Confidence 88887653
No 385
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.75 E-value=1.3e-07 Score=78.16 Aligned_cols=206 Identities=15% Similarity=0.176 Sum_probs=119.6
Q ss_pred ChHHHHhhcC------CCceEEEEeCCCCCccccc----cHHHHHHHHHHcCCEEEEeCccCC----CCcCCccCC----
Q 021783 49 DLDEVASAIG------PWTKLVWVESPTNPRQQIC----DIRKIAEMAHAHGALLLVDNSIMS----PVLSRPLEL---- 110 (307)
Q Consensus 49 d~~~l~~~l~------~~~~~v~~~~~~n~tG~~~----~~~~l~~~~~~~~~~li~D~a~~~----~~~~~~~~~---- 110 (307)
.++++++.|. ....+++++..++..|.-. -.++|.+++++||+.+|+|++|.. |.+-.-..|
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 3566666664 2456888888888777654 299999999999999999999963 222222222
Q ss_pred CccEEEeccccccccCCCceeEEEEEcChhHHH-HHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHH
Q 021783 111 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAK-ELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFL 189 (307)
Q Consensus 111 ~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l 189 (307)
..|+++ |||-+. . +|+... ++..-+ .-+....+.|.. .-..+....++.+ ..+.+.++.....+.|
T Consensus 334 PpD~vT--FSKK~q--~---gGffh~-~~frpn~pYrifNTWmGdP---~k~lll~~vv~~I--~~~~Ll~n~~~vG~~l 400 (484)
T KOG1405|consen 334 PPDVVT--FSKKFQ--T---GGFFHD-EEFRPNEPYRIFNTWMGDP---SKNLLLEEVVQEI--KREDLLNNVAHVGKAL 400 (484)
T ss_pred Ccccee--hhhhhh--c---CccccC-cccCCCchHHHhhhhcCCh---HHHHHHHHHHHHH--hHHHHHHHHHHHHHHH
Confidence 356665 788774 2 565443 232222 333344444421 1122222222222 2244455555554444
Q ss_pred hcCCCccEEecCC-CCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCc
Q 021783 190 ASHPRVKKVNYAG-LPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIP 268 (307)
Q Consensus 190 ~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~ 268 (307)
...-.-....+++ +.+ .+++|.++.|.+++.+..+.++..++.+|+.+.-.
T Consensus 401 ~~gL~~Lq~~~p~~~~~----------~RGrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~GGC------------------ 452 (484)
T KOG1405|consen 401 LKGLLELQAKYPGKINN----------LRGRGTFIAWDCPSGSIRDKLILIARLNGVNLGGC------------------ 452 (484)
T ss_pred HHHHHHHHHhCchhhhc----------ccccceEEEEeCCChHHHHHHHHHHHHcCceeccc------------------
Confidence 3211000111221 222 26789999999988887899999999888755322
Q ss_pred HHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 269 VEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 269 ~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
++..||+-+++ .+.+-+++.|.+.|+.
T Consensus 453 ---------g~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 453 ---------GDKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred ---------ccceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 23337777765 5677777888777764
No 386
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.58 E-value=2.6e-06 Score=70.45 Aligned_cols=132 Identities=19% Similarity=0.233 Sum_probs=90.3
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcC--CCceEEEEe-CCCCCcc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG--PWTKLVWVE-SPTNPRQ 74 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~--~~~~~v~~~-~~~n~tG 74 (307)
+.+++..-++..|.+|+|+|.... ......|+.+.++..- |.+.+.+.+. +.-..|++- ..+||||
T Consensus 137 a~Fl~~f~~~~~I~ip~PTWgNh~----~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTG 212 (427)
T KOG1411|consen 137 AEFLARFYPSRDIYIPDPTWGNHK----NIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTG 212 (427)
T ss_pred HHHHHhhccccceeecCCcccccC----ccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCC
Confidence 344555567999999999999887 6677888887666542 5555555554 222333333 5699999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCC---CCcC-Cc------cCCC-ccEEEeccccccccCCCceeEEE--EEcC
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMS---PVLS-RP------LELG-ADIVMHSATKFIAGHSDVMAGVL--AVKG 138 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~---~~~~-~~------~~~~-~d~~~~s~~K~~~g~~g~~~G~~--~~~~ 138 (307)
+-.. -++|.++.++.+.+-+.|-+|-. |-.. +. .+.| ..+++.|+.|.+ |.-|-|.|.+ ++++
T Consensus 213 vDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNM-GLYgERvGa~svvc~~ 291 (427)
T KOG1411|consen 213 VDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNM-GLYGERVGALSVVCKD 291 (427)
T ss_pred CCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhc-chhhhccceeEEEecC
Confidence 8874 66888889999999999999853 3221 11 1112 458899999999 6667788855 5555
Q ss_pred hhH
Q 021783 139 ERL 141 (307)
Q Consensus 139 ~~~ 141 (307)
.+.
T Consensus 292 ad~ 294 (427)
T KOG1411|consen 292 ADE 294 (427)
T ss_pred HHH
Confidence 544
No 387
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.43 E-value=1e-06 Score=76.13 Aligned_cols=155 Identities=19% Similarity=0.142 Sum_probs=91.6
Q ss_pred CCCeEEEcCCCCcchHHH-Hh--------hhcccCCcEEEEecCCChHH----------HHhh----cCCCceEEEEeCC
Q 021783 13 TGEEIVAGDDLYGGTDRL-LS--------RVTPKTGVVVKRVNTCDLDE----------VASA----IGPWTKLVWVESP 69 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~-~~--------~~~~~~g~~~~~v~~~d~~~----------l~~~----l~~~~~~v~~~~~ 69 (307)
...+|+....+|.+.... +. .......-.+..+|..++.. +++. -.+++.+|+++..
T Consensus 107 ~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi 186 (339)
T PF00202_consen 107 GRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPI 186 (339)
T ss_dssp TTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESS
T ss_pred CCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEecc
Confidence 356788777777654321 11 11112223456677776655 2222 2367899999988
Q ss_pred CCCcccccc----HHHHHHHHHHcCCEEEEeCccC-C---CCcCCccCC--CccEEEeccccccccCCCceeEEEEEcCh
Q 021783 70 TNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-S---PVLSRPLEL--GADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 70 ~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~---~~~~~~~~~--~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
+...|...+ +++|.++|++||+++|.||++. . |.+.....+ ..|+++. +|.+++ |+..|.++++++
T Consensus 187 ~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~--gK~l~g--G~p~sav~~~~~ 262 (339)
T PF00202_consen 187 QGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTF--GKGLGG--GLPISAVLGSEE 262 (339)
T ss_dssp BTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEE--EGGGGT--TSSEEEEEEEHH
T ss_pred ccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCccccc--ccchhh--hhhcccccccch
Confidence 887787763 8999999999999999999986 2 332222223 4678775 599964 466889998854
Q ss_pred hHHHHHHHHHHhcCCCCChhhHHHHhhccccHH
Q 021783 140 RLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA 172 (307)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 172 (307)
+.+.+............+..+..+...++.++
T Consensus 263 -i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~ 294 (339)
T PF00202_consen 263 -IMEAFQPGSHGSTFGGNPLSCAAALATLEILE 294 (339)
T ss_dssp -HHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHH
T ss_pred -hhccccccccccccccchHhhhhhhhHHHhhc
Confidence 43333211211222334455666666555443
No 388
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.37 E-value=7.5e-06 Score=69.43 Aligned_cols=126 Identities=15% Similarity=0.147 Sum_probs=84.0
Q ss_pred EEEecCCChHHHHhhcCC---CceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccCC-CCcC---CccCC
Q 021783 42 VKRVNTCDLDEVASAIGP---WTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLEL 110 (307)
Q Consensus 42 ~~~v~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~-~~~~---~~~~~ 110 (307)
++....+|..++++.++. ...+|+++..+-..|.... +..|...|+++|+++|.||++.. +... .-..+
T Consensus 185 v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~ 264 (433)
T KOG1401|consen 185 VVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYF 264 (433)
T ss_pred eeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHh
Confidence 344445689999999973 4689999988887777652 88999999999999999999852 3222 22233
Q ss_pred CccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH---hcCCCCChhhHHHHhhcccc
Q 021783 111 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN---AEGSGLAPFDCWICLRGVKT 170 (307)
Q Consensus 111 ~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~ 170 (307)
++.--+.++.|.++| |+.+|+..++++ +.+.+..... .....-.++.+......++.
T Consensus 265 ~~~PDI~t~aK~L~g--GlPigA~~v~~k-V~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~ 324 (433)
T KOG1401|consen 265 GVTPDITTVAKPLGG--GLPIGATGVRDK-VAEMISPGDHLYHGGTFSGNPLACSAGIKVLDE 324 (433)
T ss_pred CcCCcceeehhhccC--CceeEEEeehHH-HHhhcCCCCccccCcccCCChhhhhHHHHHHHH
Confidence 555556679999953 677999999855 5554432222 22223334555555555443
No 389
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.28 E-value=1.6e-05 Score=71.12 Aligned_cols=125 Identities=23% Similarity=0.340 Sum_probs=91.3
Q ss_pred HHHHH-hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHH
Q 021783 5 AAVTH-LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 83 (307)
Q Consensus 5 ~~~~~-~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~ 83 (307)
+..++ ...++.+.++.+.+|+.+...++..++.+|++++..+ +++...- .++...++++.|.. .|.+.|..++.
T Consensus 195 Am~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~---~~~~~~s-~~~v~gvlvQYP~t-~G~i~d~~el~ 269 (1001)
T KOG2040|consen 195 AMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD---IKEADYS-SKDVSGVLVQYPDT-EGSVLDFDELV 269 (1001)
T ss_pred HHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEecC---HHHhhcc-ccceeEEEEEcCCC-CCcccCHHHHH
Confidence 44444 3456778999999999999888888888888866544 3333221 24578899999987 59999999999
Q ss_pred HHHHHcCCEEEEeCc-cCCCCcCCccCCCccEEEeccccc-----cccCCCceeEEEEEc
Q 021783 84 EMAHAHGALLLVDNS-IMSPVLSRPLELGADIVMHSATKF-----IAGHSDVMAGVLAVK 137 (307)
Q Consensus 84 ~~~~~~~~~li~D~a-~~~~~~~~~~~~~~d~~~~s~~K~-----~~g~~g~~~G~~~~~ 137 (307)
+.+++.+..+++-.- -+.-.+..+.++|+|+.++|.+.+ ++||. .||+.++
T Consensus 270 ~~a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRFGVPlGYGGPH---AaFfAv~ 326 (1001)
T KOG2040|consen 270 ELAHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRFGVPLGYGGPH---AAFFAVS 326 (1001)
T ss_pred HHhhccCceEEEeehhhHHHccCChhhcCceeeeccccccCccccCCCch---HHHHHHH
Confidence 999999988765332 233445688899999999999884 44443 4555544
No 390
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.02 E-value=0.00022 Score=59.76 Aligned_cols=122 Identities=19% Similarity=0.165 Sum_probs=80.4
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC---------------ChHHHHhhcC----CCceEEEEe-CCCCC
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---------------DLDEVASAIG----PWTKLVWVE-SPTNP 72 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---------------d~~~l~~~l~----~~~~~v~~~-~~~n~ 72 (307)
||.+..+++..|+.+.. .-.+.+|+.++-++.+ |++.|++.|+ .+.-.|+++ ..|+-
T Consensus 122 pg~~~~~~sN~~FdTTr---~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~Nsa 198 (471)
T COG3033 122 PGSKMVAFSNYHFDTTR---GHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSA 198 (471)
T ss_pred CCccccccccceecchh---HHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEecccc
Confidence 45555556666665543 3456778887776652 7889998887 345555555 44555
Q ss_pred ccccc---cHHHHHHHHHHcCCEEEEeCccC-CCCc------CCccC-----------CCccEEEeccccccccCCCcee
Q 021783 73 RQQIC---DIRKIAEMAHAHGALLLVDNSIM-SPVL------SRPLE-----------LGADIVMHSATKFIAGHSDVMA 131 (307)
Q Consensus 73 tG~~~---~~~~l~~~~~~~~~~li~D~a~~-~~~~------~~~~~-----------~~~d~~~~s~~K~~~g~~g~~~ 131 (307)
.|... +++++.++|++|+++++.|.+-- .-.. +...+ .-+|-++.|.-|--..+ ++
T Consensus 199 gGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvn---mG 275 (471)
T COG3033 199 GGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVN---MG 275 (471)
T ss_pred CCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceec---cc
Confidence 56665 58999999999999999999842 1110 01111 13789999999954233 37
Q ss_pred EEEEEcChh
Q 021783 132 GVLAVKGER 140 (307)
Q Consensus 132 G~~~~~~~~ 140 (307)
|+++.+++.
T Consensus 276 Gfl~~~D~~ 284 (471)
T COG3033 276 GFLCFKDDS 284 (471)
T ss_pred cEEEecCcc
Confidence 999999874
No 391
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.83 E-value=0.00021 Score=60.12 Aligned_cols=198 Identities=16% Similarity=0.100 Sum_probs=118.5
Q ss_pred CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEc
Q 021783 59 PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVK 137 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~ 137 (307)
++..-|..|+-.+.+|+-.+ +.-.+.. +.+++.|........+ +.. ..|++.++.+|.+ ||.| .++++.+
T Consensus 143 ~~~ayv~~~~NeTi~Gv~v~--~~p~~~~--~~~~v~D~SS~ilsr~iDvs--k~dviyagaQKnl-GpaG--ltvvIvr 213 (365)
T COG1932 143 DNDAYVHFCWNETISGVEVP--ELPDIGS--DGLLVADASSAILSRPIDVS--KYDVIYAGAQKNL-GPAG--LTVVIVR 213 (365)
T ss_pred CCccEEEEecCCcccceEcc--CCCCCCC--CceEEEecccHHhcCCCChh--HcceEEEehhhcc-Cccc--eEEEEEc
Confidence 33444777777777888775 1111111 2789999987766555 443 4799999999999 7888 9999999
Q ss_pred ChhHHHHHH----HH-------HHhcC-CCCChhhHHHHhhccc------cHHHHHHHHHHHHHHHHHHHhcCCCccEEe
Q 021783 138 GERLAKELY----FL-------QNAEG-SGLAPFDCWICLRGVK------TMALRVEKQQDNAQKIAEFLASHPRVKKVN 199 (307)
Q Consensus 138 ~~~~~~~~~----~~-------~~~~~-~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 199 (307)
++.+.+.-. .. ..... ++++.+.-+.....++ .++...++-.++++.|.++++..+-.
T Consensus 214 ~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy---- 289 (365)
T COG1932 214 PDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFY---- 289 (365)
T ss_pred HHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCcc----
Confidence 876654311 11 11112 2333333332222221 22333455577888899999877411
Q ss_pred cCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCC
Q 021783 200 YAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE 279 (307)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 279 (307)
...... ..| .-..++|++.+.+..+.++.++...|...--|+- ..
T Consensus 290 ~~~v~~---------~~R-S~mnV~f~~~~~~ld~~fv~eae~~gl~~lkGhr-------------------------~v 334 (365)
T COG1932 290 RNLVAK---------ANR-SRMNVTFTLVDAELDKGFVAEAEAAGLIYLKGHR-------------------------SV 334 (365)
T ss_pred ccccch---------hhc-cceeEEEEcCcHHHHHHHHHHHHHcCCceecccc-------------------------CC
Confidence 111110 011 2345678888888788899988888775555421 01
Q ss_pred CeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 280 DLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 280 ~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+-+|+|+.. ++++.+++.++.+.++
T Consensus 335 gGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 335 GGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred CceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 229999963 7788887777776654
No 392
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.73 E-value=9.6e-05 Score=60.36 Aligned_cols=204 Identities=17% Similarity=0.169 Sum_probs=119.8
Q ss_pred CceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc----CCccCCCccEEEeccccccccCCCce
Q 021783 60 WTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL----SRPLELGADIVMHSATKFIAGHSDVM 130 (307)
Q Consensus 60 ~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~----~~~~~~~~d~~~~s~~K~~~g~~g~~ 130 (307)
...+.+-++.++-.|.+.| .+++++..+.+|-..|.|+++. .|.. .....++..--+.++.|-++ -|-.
T Consensus 209 gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmG--NGhP 286 (452)
T KOG1403|consen 209 GVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMG--NGHP 286 (452)
T ss_pred cHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCC--CCCe
Confidence 4455666677888888886 8899999999999999999984 3322 13333343333344677763 2333
Q ss_pred eEEEEEcChhHHHHHHH--HHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc
Q 021783 131 AGVLAVKGERLAKELYF--LQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 208 (307)
Q Consensus 131 ~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 208 (307)
.++++..++ +.+.+.. ...+..++-++..+...++-++.++ -++++++++.+.++|...-+-.+...+-+...
T Consensus 287 Va~Vattke-IA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e--~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDv-- 361 (452)
T KOG1403|consen 287 VAAVATTKE-IAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCE--DENLQEHAQQVGEKLEVLLRRLKQKHECIGDV-- 361 (452)
T ss_pred eeEEeccHH-HHHHhccccceehhccCCCchhHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHhhhccceecc--
Confidence 888888744 5555443 2222333444555666555554333 25667777777666653211001111212112
Q ss_pred hHHHhhhccCCCceEEEEe--------CCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhcCCCC
Q 021783 209 HELHYSQAKGAGSVLSFLT--------GSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE 279 (307)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 279 (307)
++.|.++.+.+ ++.+.+.+++.++++. ++..+.-+. .+
T Consensus 362 --------RGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP-------------------------h~ 408 (452)
T KOG1403|consen 362 --------RGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP-------------------------HR 408 (452)
T ss_pred --------ccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC-------------------------CC
Confidence 44555666654 3445678888888764 576654332 23
Q ss_pred CeEEEE----eccCChHHHHHHHHHHHh
Q 021783 280 DLVRIS----VGIEDVNDLISDLDKALR 303 (307)
Q Consensus 280 ~~iRis----~~~~~~~~~i~~l~~~l~ 303 (307)
+-+.|- |..++.++.+..|.+.|.
T Consensus 409 NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 409 NILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred ceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 334444 455899999999988875
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.22 E-value=0.0044 Score=50.02 Aligned_cols=97 Identities=19% Similarity=0.187 Sum_probs=60.5
Q ss_pred cCCcEEEEecC--------CChHHHHhhcCC-CceEEEEeCCCCC--cccc-ccHHHHHHHHHHcCCEEEEeCccCCCCc
Q 021783 37 KTGVVVKRVNT--------CDLDEVASAIGP-WTKLVWVESPTNP--RQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVL 104 (307)
Q Consensus 37 ~~g~~~~~v~~--------~d~~~l~~~l~~-~~~~v~~~~~~n~--tG~~-~~~~~l~~~~~~~~~~li~D~a~~~~~~ 104 (307)
..|.+++.+.. .|++.+++.+.. ....|++.+..+. .... -.+++|+.+|..|+++-++..+|+...-
T Consensus 122 ~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqse 201 (432)
T KOG3843|consen 122 HAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSE 201 (432)
T ss_pred hcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchH
Confidence 45666665553 277777777762 2333333222110 1111 2499999999999999999999985322
Q ss_pred C------CccCCC-ccEEEeccccccccCCCceeEEEEE
Q 021783 105 S------RPLELG-ADIVMHSATKFIAGHSDVMAGVLAV 136 (307)
Q Consensus 105 ~------~~~~~~-~d~~~~s~~K~~~g~~g~~~G~~~~ 136 (307)
. ...+.| .|.++.|+.|.|.-|-| |.++.
T Consensus 202 e~i~~iaa~~~~grida~vqsldknf~vpvg---gaiia 237 (432)
T KOG3843|consen 202 ECIHKIAAAAECGRIDAFVQSLDKNFMVPVG---GAIIA 237 (432)
T ss_pred HHHHHHHHHhhhccHHHHHHHhhhcceeecc---hhHhh
Confidence 1 122223 68999999999977764 54443
No 394
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=86.92 E-value=1.6 Score=31.28 Aligned_cols=88 Identities=15% Similarity=0.173 Sum_probs=58.4
Q ss_pred HHHHhhhcccCCcEEEEecCC-ChHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHc--CCEEEEeCccCCCC
Q 021783 28 DRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPV 103 (307)
Q Consensus 28 ~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~--~~~li~D~a~~~~~ 103 (307)
...+...++..|.++..++.+ +.+++.+.+. .++.+|.++... +.......++++..++. ++.+++=+.+....
T Consensus 17 l~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~t~~ 94 (121)
T PF02310_consen 17 LLYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVVGGPHATAD 94 (121)
T ss_dssp HHHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEEEESSSGHH
T ss_pred HHHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEEECCchhcC
Confidence 344667788899999999876 4677777664 577778776432 34455678888888887 78999988775433
Q ss_pred cCCccC--CCccEEEe
Q 021783 104 LSRPLE--LGADIVMH 117 (307)
Q Consensus 104 ~~~~~~--~~~d~~~~ 117 (307)
.....+ .++|.++.
T Consensus 95 ~~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 95 PEEILREYPGIDYVVR 110 (121)
T ss_dssp HHHHHHHHHTSEEEEE
T ss_pred hHHHhccCcCcceecC
Confidence 332222 46676553
No 395
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=79.96 E-value=6.8 Score=31.67 Aligned_cols=85 Identities=18% Similarity=0.208 Sum_probs=49.8
Q ss_pred HHHHhcCCCCeEE-EcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHH
Q 021783 6 AVTHLLGTGEEIV-AGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 6 ~~~~~~~~gd~Vl-v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
++.++++++-+|. +....-.... ..++..|++++..+.+|.+.|.+++..-..++++..+.+ .....-...+.+
T Consensus 14 v~~~L~~~~~~V~~l~R~~~~~~~----~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~-~~~~~~~~~li~ 88 (233)
T PF05368_consen 14 VVRALLSAGFSVRALVRDPSSDRA----QQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH-PSELEQQKNLID 88 (233)
T ss_dssp HHHHHHHTTGCEEEEESSSHHHHH----HHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC-CCHHHHHHHHHH
T ss_pred HHHHHHhCCCCcEEEEeccchhhh----hhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch-hhhhhhhhhHHH
Confidence 3344555665554 3333211111 334567999999999999999999985444444444333 223334678899
Q ss_pred HHHHcCCEEEE
Q 021783 85 MAHAHGALLLV 95 (307)
Q Consensus 85 ~~~~~~~~li~ 95 (307)
.|++.|+..++
T Consensus 89 Aa~~agVk~~v 99 (233)
T PF05368_consen 89 AAKAAGVKHFV 99 (233)
T ss_dssp HHHHHT-SEEE
T ss_pred hhhccccceEE
Confidence 99998865554
No 396
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=79.02 E-value=14 Score=26.30 Aligned_cols=88 Identities=14% Similarity=0.168 Sum_probs=53.6
Q ss_pred HHHhhhcccCCcEEEEecCC-ChHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHc---CCEEEEeCccCCCC
Q 021783 29 RLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAH---GALLLVDNSIMSPV 103 (307)
Q Consensus 29 ~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~---~~~li~D~a~~~~~ 103 (307)
..+..+++..|.++.....+ .++++.+.+. .++.+|.++... +.......++.+.+++. ++.+++=+.+....
T Consensus 17 ~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~--~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~ 94 (119)
T cd02067 17 NIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRD 94 (119)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHHcCCCCCeEEEECCCCChh
Confidence 44557788899999877654 5566666554 677777776432 23445678888888877 45566655443221
Q ss_pred cCCccCCCccEEEec
Q 021783 104 LSRPLELGADIVMHS 118 (307)
Q Consensus 104 ~~~~~~~~~d~~~~s 118 (307)
.......|.|.++.+
T Consensus 95 ~~~~~~~G~D~~~~~ 109 (119)
T cd02067 95 FKFLKEIGVDAYFGP 109 (119)
T ss_pred HHHHHHcCCeEEECC
Confidence 112334466766654
No 397
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=76.69 E-value=18 Score=32.03 Aligned_cols=83 Identities=10% Similarity=0.189 Sum_probs=52.8
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCc---EEEEecCCChHHHHhhcC-CCceEEEEeCCCCC---c-----cccc
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV---VVKRVNTCDLDEVASAIG-PWTKLVWVESPTNP---R-----QQIC 77 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~d~~~l~~~l~-~~~~~v~~~~~~n~---t-----G~~~ 77 (307)
+-+.+ +|+.-..+-.... +.-.+.+.|+ ++......+++++.+.+. .++.++++++.++. . |.+-
T Consensus 117 lA~~~-~vLYVsGEES~~Q--iklRA~RL~~~~~~l~l~aEt~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVs 193 (456)
T COG1066 117 LAKRG-KVLYVSGEESLQQ--IKLRADRLGLPTNNLYLLAETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVS 193 (456)
T ss_pred HHhcC-cEEEEeCCcCHHH--HHHHHHHhCCCccceEEehhcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHH
Confidence 34455 6665454443333 3334566663 333444468999998887 68899998877652 2 4333
Q ss_pred c----HHHHHHHHHHcCCEEEE
Q 021783 78 D----IRKIAEMAHAHGALLLV 95 (307)
Q Consensus 78 ~----~~~l~~~~~~~~~~li~ 95 (307)
. -.+|.++|++.|+.++.
T Consensus 194 QVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 194 QVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHHHHHHHHHHHHHHcCCeEEE
Confidence 2 56899999999987765
No 398
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=75.87 E-value=3.2 Score=38.78 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=31.3
Q ss_pred CCCCCccccccHHHHHHHHHHcCCEEEEeCccCC
Q 021783 68 SPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMS 101 (307)
Q Consensus 68 ~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~ 101 (307)
.|++..|..-+++++++.||++||-||+|-+|+.
T Consensus 205 Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~~H 238 (628)
T COG0296 205 APTSRYGTPEDFKALVDAAHQAGIGVILDWVPNH 238 (628)
T ss_pred cccccCCCHHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 5788889999999999999999999999999873
No 399
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=74.12 E-value=17 Score=26.27 Aligned_cols=68 Identities=15% Similarity=0.183 Sum_probs=46.1
Q ss_pred hhcccCCcEEEEecCCChHHHHhhcC--CCceEEEEeCCCCCccccccHHHHHHHHHHcC--CEEEEeCccCCCC
Q 021783 33 RVTPKTGVVVKRVNTCDLDEVASAIG--PWTKLVWVESPTNPRQQICDIRKIAEMAHAHG--ALLLVDNSIMSPV 103 (307)
Q Consensus 33 ~~~~~~g~~~~~v~~~d~~~l~~~l~--~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~--~~li~D~a~~~~~ 103 (307)
..++..|..+...+....++..+.+. .++.+|.++. .+.......++.+..|+.+ +.+++=+.+....
T Consensus 10 a~l~~~g~~v~~~~~~~~~~~~~~~~~~~~pdiv~~S~---~~~~~~~~~~~~~~ik~~~p~~~iv~GG~~~t~~ 81 (127)
T cd02068 10 AVLEDAGFIVAEHDVLSADDIVEDIKELLKPDVVGISL---MTSAIYEALELAKIAKEVLPNVIVVVGGPHATFF 81 (127)
T ss_pred HHHHHCCCeeeecCCCCHHHHHHHHHHhcCCCEEEEee---ccccHHHHHHHHHHHHHHCCCCEEEECCcchhhC
Confidence 45566777777777666666555554 5778887763 2334446788888888875 8888877776543
No 400
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=72.81 E-value=25 Score=29.31 Aligned_cols=80 Identities=10% Similarity=0.102 Sum_probs=32.7
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-C-ChHHHHhhcCCCceEEEEeCCCCCccccc----cHHHHHHHHHH
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-C-DLDEVASAIGPWTKLVWVESPTNPRQQIC----DIRKIAEMAHA 88 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~-d~~~l~~~l~~~~~~v~~~~~~n~tG~~~----~~~~l~~~~~~ 88 (307)
|-|++++..+. ....+...++..|..++.+-. . +.+.+++..+.....|++.+....||... .++++.+..++
T Consensus 121 dgviipDLP~e-e~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ir~ 199 (263)
T CHL00200 121 KGLIIPDLPYE-ESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCIYLVSTTGVTGLKTELDKKLKKLIETIKK 199 (263)
T ss_pred eEEEecCCCHH-HHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCcEEEEcCCCCCCCCccccHHHHHHHHHHHH
Confidence 44555554442 222333444555554433322 1 22333333332223444444444455431 24444444444
Q ss_pred c-CCEEEE
Q 021783 89 H-GALLLV 95 (307)
Q Consensus 89 ~-~~~li~ 95 (307)
+ +.++.+
T Consensus 200 ~t~~Pi~v 207 (263)
T CHL00200 200 MTNKPIIL 207 (263)
T ss_pred hcCCCEEE
Confidence 4 444444
No 401
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=71.98 E-value=19 Score=24.95 Aligned_cols=50 Identities=12% Similarity=-0.001 Sum_probs=35.7
Q ss_pred cEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 40 VVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 40 ~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
-.++.++.+..+-+..++....++++++ |...+-+++.++|++.++.++.
T Consensus 41 ~~lvIt~gdR~di~~~a~~~~i~~iIlt------g~~~~~~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 41 GDLVITPGDREDIQLAAIEAGIACIILT------GGLEPSEEVLELAKELGIPVIS 90 (105)
T ss_dssp TEEEEEETT-HHHHHHHCCTTECEEEEE------TT----HHHHHHHHHHT-EEEE
T ss_pred CeEEEEeCCcHHHHHHHHHhCCCEEEEe------CCCCCCHHHHHHHHHCCCEEEE
Confidence 4666677778888888888888888885 4555678899999999988875
No 402
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=71.12 E-value=10 Score=29.74 Aligned_cols=43 Identities=21% Similarity=0.274 Sum_probs=31.8
Q ss_pred HHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 52 EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 52 ~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
+|.+...-.+..|+++ ..|+.|.....+++.++|++||+.++.
T Consensus 148 dLarlAGl~Pa~VicE-i~~~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 148 DLARLAGLKPAGVICE-IMNDDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred HHHHHcCCCCcEEEEE-EeCCCccccChHHHHHHHHHcCCcEEE
Confidence 3444444455666655 456699999999999999999998874
No 403
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=70.87 E-value=19 Score=30.54 Aligned_cols=73 Identities=15% Similarity=0.148 Sum_probs=43.1
Q ss_pred cCCCCcchHHHHhhhccc--CCcEEEEecCC-ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEe
Q 021783 20 GDDLYGGTDRLLSRVTPK--TGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 96 (307)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~--~g~~~~~v~~~-d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D 96 (307)
--++|++.. .+-+. -+.-++.+|.. -++.+++......+.+++-+...+ ..+.++|.++|+++|+.++==
T Consensus 50 G~~~y~sv~----dlp~~~~~DlAvi~vp~~~v~~~l~e~~~~gvk~avI~s~Gf~---~~~~~~l~~~a~~~girvlGP 122 (291)
T PRK05678 50 GLPVFNTVA----EAVEATGANASVIYVPPPFAADAILEAIDAGIDLIVCITEGIP---VLDMLEVKAYLERKKTRLIGP 122 (291)
T ss_pred CeeccCCHH----HHhhccCCCEEEEEcCHHHHHHHHHHHHHCCCCEEEEECCCCC---HHHHHHHHHHHHHcCCEEECC
Confidence 344565554 33333 45556666643 356667766677776655432221 223459999999999988854
Q ss_pred Ccc
Q 021783 97 NSI 99 (307)
Q Consensus 97 ~a~ 99 (307)
++.
T Consensus 123 Nc~ 125 (291)
T PRK05678 123 NCP 125 (291)
T ss_pred CCC
Confidence 444
No 404
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=70.17 E-value=7.1 Score=33.82 Aligned_cols=57 Identities=16% Similarity=0.066 Sum_probs=36.6
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCE
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGAL 92 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~ 92 (307)
|+-.|++++|+|.+.. ++ +-|. -.+-+.++. -|.-.---+|.++|++||++
T Consensus 261 p~AdvVItNPTH~AVA------lk-------Y~~~---------~~~AP~VvA-------KG~d~~AlkIreiA~e~~Ip 311 (363)
T COG1377 261 PKADVVITNPTHYAVA------LK-------YDPE---------KMPAPVVVA-------KGVDLVALKIREIAKEHGIP 311 (363)
T ss_pred CCCCEEeeCcCceeee------ee-------eccc---------cCCCCEEEE-------eCCcHHHHHHHHHHHHcCCc
Confidence 5677899999997664 11 1110 012344444 24444466889999999999
Q ss_pred EEEeCc
Q 021783 93 LLVDNS 98 (307)
Q Consensus 93 li~D~a 98 (307)
+++|-.
T Consensus 312 i~enpp 317 (363)
T COG1377 312 IIENPP 317 (363)
T ss_pred eecChH
Confidence 999865
No 405
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=69.87 E-value=30 Score=28.77 Aligned_cols=74 Identities=7% Similarity=0.026 Sum_probs=29.8
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-C-ChHHHHhhcCCCceEEEEeCCCCCcccccc----HHHHHHHHHH
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-C-DLDEVASAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHA 88 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~-d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~ 88 (307)
|-+++++.... ....+...++..|..++++-. + +.+.+++........++..+.+--||.-.+ ++++.+-.|+
T Consensus 124 dGlivpDLP~e-e~~~~~~~~~~~gi~~I~lvaPtt~~~rl~~i~~~a~GFiY~vs~~GvTG~~~~~~~~~~~~v~~vr~ 202 (265)
T COG0159 124 DGLLVPDLPPE-ESDELLKAAEKHGIDPIFLVAPTTPDERLKKIAEAASGFIYYVSRMGVTGARNPVSADVKELVKRVRK 202 (265)
T ss_pred CEEEeCCCChH-HHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCcEEEEecccccCCCcccchhHHHHHHHHHH
Confidence 44555554331 222333444555554433321 2 223333333322234444444444554443 4444444444
Q ss_pred c
Q 021783 89 H 89 (307)
Q Consensus 89 ~ 89 (307)
+
T Consensus 203 ~ 203 (265)
T COG0159 203 Y 203 (265)
T ss_pred h
Confidence 3
No 406
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=69.86 E-value=24 Score=32.48 Aligned_cols=70 Identities=10% Similarity=0.110 Sum_probs=49.8
Q ss_pred HhhhcccCC-cEEEEecCC----ChHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHc--CCEEEEeCccCCC
Q 021783 31 LSRVTPKTG-VVVKRVNTC----DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSP 102 (307)
Q Consensus 31 ~~~~~~~~g-~~~~~v~~~----d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~--~~~li~D~a~~~~ 102 (307)
+...++..| .++..+|.. +.+++.+.+. .++.+|.++.. |.......++++.+++. ++.+|+=+.|.+.
T Consensus 28 lAa~L~~~G~~~V~iiD~~~~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t~ 104 (497)
T TIGR02026 28 IGGALLDAGYHDVTFLDAMTGPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHPTF 104 (497)
T ss_pred HHHHHHhcCCcceEEecccccCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCcCc
Confidence 334566788 688888863 5577777665 46788877532 34555677899999987 9999998888654
Q ss_pred C
Q 021783 103 V 103 (307)
Q Consensus 103 ~ 103 (307)
.
T Consensus 105 ~ 105 (497)
T TIGR02026 105 M 105 (497)
T ss_pred C
Confidence 3
No 407
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=69.67 E-value=11 Score=28.75 Aligned_cols=49 Identities=18% Similarity=0.262 Sum_probs=39.1
Q ss_pred ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcC--CEEEEeCccCCC
Q 021783 49 DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG--ALLLVDNSIMSP 102 (307)
Q Consensus 49 d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~--~~li~D~a~~~~ 102 (307)
|.+++++.++.+...+++- +|.+++++++.+.+++.| +++++|=..+..
T Consensus 12 ~~~~le~~les~~~~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~ 62 (181)
T COG1954 12 DNKDLEKALESESQYVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEGLS 62 (181)
T ss_pred hHHHHHHHhcCCCeEEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhcccC
Confidence 7789999998777766652 578899999999999997 667777776644
No 408
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=68.42 E-value=31 Score=28.61 Aligned_cols=80 Identities=9% Similarity=0.106 Sum_probs=47.7
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcCCCceEEEEeCCCCCccccc----cHHHHHHHHHH
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIGPWTKLVWVESPTNPRQQIC----DIRKIAEMAHA 88 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~----~~~~l~~~~~~ 88 (307)
|-+++++..+. ....+...++..|..++.+-. ...+.+++........|++.+....||.-. .+++..+.+++
T Consensus 117 dGlIipDLP~e-e~~~~~~~~~~~gl~~I~lv~p~t~~~Ri~~i~~~a~gFiY~vs~~GvTG~~~~~~~~l~~~i~~ik~ 195 (259)
T PF00290_consen 117 DGLIIPDLPPE-ESEELREAAKKHGLDLIPLVAPTTPEERIKKIAKQASGFIYLVSRMGVTGSRTELPDELKEFIKRIKK 195 (259)
T ss_dssp EEEEETTSBGG-GHHHHHHHHHHTT-EEEEEEETTS-HHHHHHHHHH-SSEEEEESSSSSSSTTSSCHHHHHHHHHHHHH
T ss_pred CEEEEcCCChH-HHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCcEEEeeccCCCCCCcccchHHHHHHHHHHHh
Confidence 67888887764 334555667778877655432 244555555544556778777777788764 26666666676
Q ss_pred c-CCEEEE
Q 021783 89 H-GALLLV 95 (307)
Q Consensus 89 ~-~~~li~ 95 (307)
+ +.++++
T Consensus 196 ~~~~Pv~v 203 (259)
T PF00290_consen 196 HTDLPVAV 203 (259)
T ss_dssp TTSS-EEE
T ss_pred hcCcceEE
Confidence 6 455544
No 409
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=68.30 E-value=20 Score=30.32 Aligned_cols=75 Identities=19% Similarity=0.190 Sum_probs=44.0
Q ss_pred EEcCCCCcchHHHHhhhccc--CCcEEEEecCC-ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 021783 18 VAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 94 (307)
Q Consensus 18 lv~~~~~~~~~~~~~~~~~~--~g~~~~~v~~~-d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li 94 (307)
+.--++|++.. .+-+. .+.-++.+|.. -++.+++.....++.+++-+...+ . .+.++|.++|+++|+.++
T Consensus 46 v~G~~~y~sv~----dlp~~~~~Dlavi~vpa~~v~~~l~e~~~~Gvk~avIis~Gf~--e-~~~~~l~~~a~~~giril 118 (286)
T TIGR01019 46 VLGLPVFDSVK----EAVEETGANASVIFVPAPFAADAIFEAIDAGIELIVCITEGIP--V-HDMLKVKRYMEESGTRLI 118 (286)
T ss_pred ecCeeccCCHH----HHhhccCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCC--H-HHHHHHHHHHHHcCCEEE
Confidence 33445665555 33333 35556555543 356666666677766655432221 1 145799999999999887
Q ss_pred EeCcc
Q 021783 95 VDNSI 99 (307)
Q Consensus 95 ~D~a~ 99 (307)
==++.
T Consensus 119 GPNc~ 123 (286)
T TIGR01019 119 GPNCP 123 (286)
T ss_pred CCCCc
Confidence 54443
No 410
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=68.20 E-value=24 Score=29.62 Aligned_cols=78 Identities=18% Similarity=0.189 Sum_probs=47.2
Q ss_pred CCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEE
Q 021783 58 GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAV 136 (307)
Q Consensus 58 ~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~ 136 (307)
+++.+-++.|.-..-.|+-.+.-- +-.-+|.++|.|-..-.-..+ +... .+++..+.+|.. |+.| .-.+++
T Consensus 146 ~~da~yvyyCaNETVHGVEf~~~P---~~~~~~~vlVaDmSSnflSrpvDvsk--~gvi~aGAQKN~-G~aG--~Tvviv 217 (370)
T KOG2790|consen 146 NPDASYVYYCANETVHGVEFDFIP---VNDPKGAVLVADMSSNFLSRPVDVSK--FGVIFAGAQKNV-GPAG--VTVVIV 217 (370)
T ss_pred CCCccEEEEecCceeeceecCCCC---CCCCCCceEEEecccchhcCCccchh--cceEEecccccc-Cccc--cEEEEE
Confidence 355667777765555666653111 112347777887654332222 3333 567888899999 7888 667777
Q ss_pred cChhHHH
Q 021783 137 KGERLAK 143 (307)
Q Consensus 137 ~~~~~~~ 143 (307)
|++.+.+
T Consensus 218 r~dllg~ 224 (370)
T KOG2790|consen 218 RKDLLGN 224 (370)
T ss_pred ehhhhcc
Confidence 8775544
No 411
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=64.33 E-value=38 Score=23.09 Aligned_cols=63 Identities=13% Similarity=0.101 Sum_probs=39.0
Q ss_pred HHhhhcccCCcEEEEe--cC-CChH--HHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEe
Q 021783 30 LLSRVTPKTGVVVKRV--NT-CDLD--EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 96 (307)
Q Consensus 30 ~~~~~~~~~g~~~~~v--~~-~d~~--~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D 96 (307)
.+...++..|.+.... +. .... .++..+..---+|+++...+. --...+.+.|+++|++++.=
T Consensus 14 ~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH----~~~~~vk~~akk~~ip~~~~ 81 (97)
T PF10087_consen 14 RYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSH----NAMWKVKKAAKKYGIPIIYS 81 (97)
T ss_pred HHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcCh----HHHHHHHHHHHHcCCcEEEE
Confidence 3447778899999888 22 2223 377776532233333333222 13778889999999988863
No 412
>cd08071 MPN_DUF2466 Mov34/MPN/PAD-1 family. Mov34 DUF2466 (also known as DNA repair protein RadC) domain of unknown function contains the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity. However, to date, the name RadC has been misleading and no function has been determined.
Probab=63.88 E-value=15 Score=26.11 Aligned_cols=43 Identities=14% Similarity=0.203 Sum_probs=28.6
Q ss_pred HHHHhhcCCCceEEEEeCCCCCcccccc-------HHHHHHHHHHcCCEEE
Q 021783 51 DEVASAIGPWTKLVWVESPTNPRQQICD-------IRKIAEMAHAHGALLL 94 (307)
Q Consensus 51 ~~l~~~l~~~~~~v~~~~~~n~tG~~~~-------~~~l~~~~~~~~~~li 94 (307)
+-++.++..+...+++.| |+|+|...| -++|.+.++--|+.++
T Consensus 50 ~i~~~aL~~~A~~vil~H-NHPsG~~~PS~~D~~~T~~l~~~~~~l~i~ll 99 (113)
T cd08071 50 EIFKEALRHNAAAIILAH-NHPSGDPTPSREDIELTKRLKEAGELLGIRLL 99 (113)
T ss_pred HHHHHHHHHhhheEEEEe-eCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEe
Confidence 345566765555555554 668888875 5577888888777554
No 413
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=62.25 E-value=53 Score=28.67 Aligned_cols=55 Identities=15% Similarity=0.108 Sum_probs=38.0
Q ss_pred ChHHHHhhcC-----CCceEEEEeC-----CCCCccccccHHHHHHHHHHcCCEEEEeCccCCCC
Q 021783 49 DLDEVASAIG-----PWTKLVWVES-----PTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV 103 (307)
Q Consensus 49 d~~~l~~~l~-----~~~~~v~~~~-----~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~ 103 (307)
+++++..++. .+..++++.- .+..+-...|+..|..+-+..++++|+|.+|+.|.
T Consensus 220 t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 220 TIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 5666655544 3556666653 21222356789999999777799999999999875
No 414
>PRK04296 thymidine kinase; Provisional
Probab=60.98 E-value=30 Score=27.05 Aligned_cols=90 Identities=9% Similarity=0.065 Sum_probs=44.7
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC---CCceEEEEeCCCCCccccccHHH
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
..+..+...|.+|++..|.+.... .....+...|.++..+.....+++.+.+. .++.+|+++-.+.-. .-.+.+
T Consensus 21 ~~~~~~~~~g~~v~i~k~~~d~~~-~~~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~dvviIDEaq~l~--~~~v~~ 97 (190)
T PRK04296 21 QRAYNYEERGMKVLVFKPAIDDRY-GEGKVVSRIGLSREAIPVSSDTDIFELIEEEGEKIDCVLIDEAQFLD--KEQVVQ 97 (190)
T ss_pred HHHHHHHHcCCeEEEEeccccccc-cCCcEecCCCCcccceEeCChHHHHHHHHhhCCCCCEEEEEccccCC--HHHHHH
Confidence 344445566888876655322111 01144566665543322233344433332 356677777654310 011455
Q ss_pred HHHHHHHcCCEEEEeC
Q 021783 82 IAEMAHAHGALLLVDN 97 (307)
Q Consensus 82 l~~~~~~~~~~li~D~ 97 (307)
+.+.++..|+.+|+=+
T Consensus 98 l~~~l~~~g~~vi~tg 113 (190)
T PRK04296 98 LAEVLDDLGIPVICYG 113 (190)
T ss_pred HHHHHHHcCCeEEEEe
Confidence 6666666777666533
No 415
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=60.91 E-value=50 Score=26.87 Aligned_cols=86 Identities=19% Similarity=0.188 Sum_probs=49.5
Q ss_pred hhcccCCcEEEE--ecCCChHHHHhhcCC-CceEEEEeCCCCCccccc-c-----HHHHHHHHHHcC--CEEEEeCccCC
Q 021783 33 RVTPKTGVVVKR--VNTCDLDEVASAIGP-WTKLVWVESPTNPRQQIC-D-----IRKIAEMAHAHG--ALLLVDNSIMS 101 (307)
Q Consensus 33 ~~~~~~g~~~~~--v~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~-~-----~~~l~~~~~~~~--~~li~D~a~~~ 101 (307)
+.++..|++.-. =|...++.++..+.. ..-+++...|.. .|..+ + ++++.++..+++ +.+-+|+--..
T Consensus 102 ~~Ik~~G~kaGlalnP~T~~~~l~~~l~~vD~VLvMsV~PGf-~GQ~fi~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~ 180 (229)
T PRK09722 102 DEIRRAGMKVGLVLNPETPVESIKYYIHLLDKITVMTVDPGF-AGQPFIPEMLDKIAELKALRERNGLEYLIEVDGSCNQ 180 (229)
T ss_pred HHHHHcCCCEEEEeCCCCCHHHHHHHHHhcCEEEEEEEcCCC-cchhccHHHHHHHHHHHHHHHhcCCCeEEEEECCCCH
Confidence 556677766432 244577888877763 223333335655 35554 2 445555555654 67889986554
Q ss_pred CCcCCccCCCccEEEecc
Q 021783 102 PVLSRPLELGADIVMHSA 119 (307)
Q Consensus 102 ~~~~~~~~~~~d~~~~s~ 119 (307)
.......+.|+|+++.+.
T Consensus 181 ~~i~~~~~aGad~~V~Gs 198 (229)
T PRK09722 181 KTYEKLMEAGADVFIVGT 198 (229)
T ss_pred HHHHHHHHcCCCEEEECh
Confidence 444445566899887543
No 416
>smart00642 Aamy Alpha-amylase domain.
Probab=60.61 E-value=11 Score=28.83 Aligned_cols=31 Identities=23% Similarity=0.354 Sum_probs=26.3
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 70 TNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 70 ~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
....|...+++++++-||++|+.|+.|-+..
T Consensus 63 ~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 63 DPRFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3345777789999999999999999999854
No 417
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=60.56 E-value=65 Score=26.19 Aligned_cols=85 Identities=11% Similarity=0.066 Sum_probs=48.9
Q ss_pred hhcccCCc--EE--EEecCCChHHHHhhcCC-CceEEEEeCCCCCccccc-c-----HHHHHHHHHHcC--CEEEEeCcc
Q 021783 33 RVTPKTGV--VV--KRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQIC-D-----IRKIAEMAHAHG--ALLLVDNSI 99 (307)
Q Consensus 33 ~~~~~~g~--~~--~~v~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~-~-----~~~l~~~~~~~~--~~li~D~a~ 99 (307)
+.++..|+ +. ..=|...++.++..+.. +.-+++...|..- |..+ + ++++.++.+++| ..+-+|+--
T Consensus 110 ~~Ik~~g~~~kaGlalnP~Tp~~~i~~~l~~vD~VLiMtV~PGfg-GQ~f~~~~l~KI~~lr~~~~~~~~~~~IeVDGGI 188 (228)
T PRK08091 110 EWLAKQKTTVLIGLCLCPETPISLLEPYLDQIDLIQILTLDPRTG-TKAPSDLILDRVIQVENRLGNRRVEKLISIDGSM 188 (228)
T ss_pred HHHHHCCCCceEEEEECCCCCHHHHHHHHhhcCEEEEEEECCCCC-CccccHHHHHHHHHHHHHHHhcCCCceEEEECCC
Confidence 44566676 43 33344577888888763 3333333366553 4443 2 555555656654 668899855
Q ss_pred CCCCcCCccCCCccEEEec
Q 021783 100 MSPVLSRPLELGADIVMHS 118 (307)
Q Consensus 100 ~~~~~~~~~~~~~d~~~~s 118 (307)
.........+.|+|+++.+
T Consensus 189 ~~~ti~~l~~aGaD~~V~G 207 (228)
T PRK08091 189 TLELASYLKQHQIDWVVSG 207 (228)
T ss_pred CHHHHHHHHHCCCCEEEEC
Confidence 4433344556688987754
No 418
>PRK03673 hypothetical protein; Provisional
Probab=60.44 E-value=17 Score=32.31 Aligned_cols=85 Identities=20% Similarity=0.293 Sum_probs=56.3
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcC---CCceEEEEeCCCCCccccccHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
++.-||+++ ..-.+.++...+...+...|+++..... ||.+.+.+.+. .+..+|+++....||-.-...+.+++
T Consensus 6 Iis~GdEll-~G~i~dtN~~~la~~L~~~G~~v~~~~~v~D~~~~i~~~l~~a~~~~DlVI~tGGlGpt~dD~t~~avA~ 84 (396)
T PRK03673 6 MLSTGDEVL-HGQIVDTNAAWLADFFFHQGLPLSRRNTVGDNLDALVAILRERSQHADVLIVNGGLGPTSDDLSALAAAT 84 (396)
T ss_pred EEEecccCC-CCeEEEhHHHHHHHHHHHCCCEEEEEEEcCCCHHHHHHHHHHHhccCCEEEEcCCCCCCCcccHHHHHHH
Confidence 345588876 2333345555566778889998876653 68888888876 46678888877777655444444433
Q ss_pred HHHHcCCEEEEeCc
Q 021783 85 MAHAHGALLLVDNS 98 (307)
Q Consensus 85 ~~~~~~~~li~D~a 98 (307)
..|..++.|+.
T Consensus 85 ---a~g~~L~~d~e 95 (396)
T PRK03673 85 ---AAGEGLVLHEE 95 (396)
T ss_pred ---HcCCCceeCHH
Confidence 45677777776
No 419
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=60.06 E-value=27 Score=30.14 Aligned_cols=65 Identities=18% Similarity=0.216 Sum_probs=41.9
Q ss_pred hhcccCCcEEEEecCCChHHHHhhcC--CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 33 RVTPKTGVVVKRVNTCDLDEVASAIG--PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 33 ~~~~~~g~~~~~v~~~d~~~l~~~l~--~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.+++.-.++++++...++...+-... .+-|.|+++.|--. +..+.++|.+.|+++| .++.|+.+.
T Consensus 66 eLakd~~vDvVyi~~~~~qH~evv~l~l~~~K~VL~EKPla~--n~~e~~~iveaA~~rg-v~~meg~~~ 132 (351)
T KOG2741|consen 66 ELAKDPEVDVVYISTPNPQHYEVVMLALNKGKHVLCEKPLAM--NVAEAEEIVEAAEARG-VFFMEGLWW 132 (351)
T ss_pred HHhcCCCcCEEEeCCCCccHHHHHHHHHHcCCcEEecccccC--CHHHHHHHHHHHHHcC-cEEEeeeee
Confidence 45555566777777765544433322 34455777765421 3346999999999999 677788765
No 420
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=59.98 E-value=70 Score=26.42 Aligned_cols=55 Identities=15% Similarity=0.190 Sum_probs=35.2
Q ss_pred ChHHHHhhcC-----CCceEEEEe----CCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCC
Q 021783 49 DLDEVASAIG-----PWTKLVWVE----SPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV 103 (307)
Q Consensus 49 d~~~l~~~l~-----~~~~~v~~~----~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~ 103 (307)
+++++..++. .+..++++. ...+++-+..|+..|..+.+..+++|++|-.|+.|.
T Consensus 134 t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 134 TIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 5555555543 344556554 112233335678888888877899999999888664
No 421
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=59.60 E-value=47 Score=27.54 Aligned_cols=9 Identities=33% Similarity=0.434 Sum_probs=3.8
Q ss_pred hhcccCCcE
Q 021783 33 RVTPKTGVV 41 (307)
Q Consensus 33 ~~~~~~g~~ 41 (307)
..++..|..
T Consensus 134 ~~~~~~gl~ 142 (256)
T TIGR00262 134 EAAKKHGVK 142 (256)
T ss_pred HHHHHCCCc
Confidence 334444444
No 422
>PLN02591 tryptophan synthase
Probab=59.56 E-value=52 Score=27.18 Aligned_cols=80 Identities=13% Similarity=0.104 Sum_probs=36.8
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-C-ChHHHHhhcCCCceEEEEeCCCCCcccc----ccHHHHHHHHHH
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-C-DLDEVASAIGPWTKLVWVESPTNPRQQI----CDIRKIAEMAHA 88 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~-d~~~l~~~l~~~~~~v~~~~~~n~tG~~----~~~~~l~~~~~~ 88 (307)
|-|++++..+ .-...+...++..|..++.+-. + +.+.+++........|++.+....||.. .+++++.+.+++
T Consensus 108 ~GviipDLP~-ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY~Vs~~GvTG~~~~~~~~~~~~i~~vk~ 186 (250)
T PLN02591 108 HGLVVPDLPL-EETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVYLVSSTGVTGARASVSGRVESLLQELKE 186 (250)
T ss_pred CEEEeCCCCH-HHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEEEeeCCCCcCCCcCCchhHHHHHHHHHh
Confidence 4566666554 2222334455566655444432 1 2233444443334455554444445542 125554555555
Q ss_pred c-CCEEEE
Q 021783 89 H-GALLLV 95 (307)
Q Consensus 89 ~-~~~li~ 95 (307)
+ +.++++
T Consensus 187 ~~~~Pv~v 194 (250)
T PLN02591 187 VTDKPVAV 194 (250)
T ss_pred cCCCceEE
Confidence 4 444444
No 423
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=59.28 E-value=37 Score=27.84 Aligned_cols=9 Identities=11% Similarity=0.368 Sum_probs=3.8
Q ss_pred hhcccCCcE
Q 021783 33 RVTPKTGVV 41 (307)
Q Consensus 33 ~~~~~~g~~ 41 (307)
..++..|.+
T Consensus 123 ~~~~~~Gl~ 131 (244)
T PRK13125 123 EIIKNKGLK 131 (244)
T ss_pred HHHHHcCCC
Confidence 334444444
No 424
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=58.55 E-value=28 Score=27.50 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=29.2
Q ss_pred HHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 53 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 53 l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
|.+.-.-.+.+++++- -|..|...+.+++.++|++||+.++.
T Consensus 145 La~lAGl~p~avi~ei-l~~dG~~~~~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 145 LARLAGLSPVAVICEI-LDDDGDMARRDELEEFAKKHGLPIVS 186 (194)
T ss_dssp HHHHTTS-SBEEEEEB-BETTSSBHCHHHHHHHHHHTT-EEEE
T ss_pred HHHHhCCCCcEEEEEE-eCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 3333333456666554 45589999999999999999998874
No 425
>PLN00191 enolase
Probab=58.29 E-value=81 Score=28.71 Aligned_cols=86 Identities=13% Similarity=0.098 Sum_probs=58.7
Q ss_pred HhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcCCC-ceEEEEeCCCCCccccccHHHHHHH
Q 021783 9 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 9 ~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~~~-~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
.++.+=+-+.+.+|.....+..|..+.+...+.+..=+. .+++++.+.+..+ ..++.+. .|..|.+.+..+++++
T Consensus 306 ~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~iK--l~qiGGITea~~~a~l 383 (457)
T PLN00191 306 EFVSDYPIVSIEDPFDQDDWEHWAKLTSLEDVQIVGDDLLVTNPKRVAKAIQEKACNALLLK--VNQIGTVTESIEAVKM 383 (457)
T ss_pred HHhhcCCcEEEECCCCcccHHHHHHHHccCCCcEEccCcccCCHHHHHHHHHhCCCCEEEec--ccccCCHHHHHHHHHH
Confidence 344444556788888777777777776666665544332 3688888888743 3344443 3447888899999999
Q ss_pred HHHcCCEEEEe
Q 021783 86 AHAHGALLLVD 96 (307)
Q Consensus 86 ~~~~~~~li~D 96 (307)
|+++|+.+++-
T Consensus 384 A~~~G~~~~is 394 (457)
T PLN00191 384 SKAAGWGVMTS 394 (457)
T ss_pred HHHCCCEEEeC
Confidence 99999988763
No 426
>PF08423 Rad51: Rad51; InterPro: IPR013632 This domain is found at the C terminus of the DNA repair and recombination protein Rad51. It is critical for DNA binding []. Rad51 is a homologue of the bacterial RecA protein. Rad51 and RecA share a core ATPase domain.; PDB: 2ZUC_A 2Z43_C 2ZUD_B 2DFL_A 2ZUB_A 2BKE_A 2KZ3_A 2CVH_B 2CVF_B 1SZP_D ....
Probab=58.16 E-value=28 Score=28.86 Aligned_cols=82 Identities=17% Similarity=0.229 Sum_probs=42.7
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCc-------EEEEecCCChHHHHhhcC--------CCceEEEEeCCCCCcc----
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGV-------VVKRVNTCDLDEVASAIG--------PWTKLVWVESPTNPRQ---- 74 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~-------~~~~v~~~d~~~l~~~l~--------~~~~~v~~~~~~n~tG---- 74 (307)
+.+|+.-+-+..-...-+.+.++.++. ++......+.+++.+.+. .+.++|++++...+.-
T Consensus 72 ~~~vvyidTe~~f~~~Rl~~i~~~~~~~~~~~l~~I~v~~~~~~~~l~~~L~~l~~~l~~~~ikLIVIDSIaalfr~e~~ 151 (256)
T PF08423_consen 72 GGKVVYIDTEGTFSPERLQQIAERFGLDPEEILDNIFVIRVFDLEELLELLEQLPKLLSESKIKLIVIDSIAALFRSEFS 151 (256)
T ss_dssp SSEEEEEESSSSS-HHHHHHHHHHTTS-HHHHHHTEEEEE-SSHHHHHHHHHHHHHHHHHSCEEEEEEETSSHHHHHHSG
T ss_pred CCceEEEeCCCCCCHHHHHHHhhccccccchhhhceeeeecCCHHHHHHHHHHHHhhccccceEEEEecchHHHHHHHHc
Confidence 455554343332222234455655553 222333345555544443 5789999998776432
Q ss_pred ---cccc--------HHHHHHHHHHcCCEEEE
Q 021783 75 ---QICD--------IRKIAEMAHAHGALLLV 95 (307)
Q Consensus 75 ---~~~~--------~~~l~~~~~~~~~~li~ 95 (307)
.... ...|..+|++|++.|++
T Consensus 152 ~~~~~~~R~~~L~~~~~~L~~lA~~~~iaVvv 183 (256)
T PF08423_consen 152 GRGDLAERQRMLARLARILKRLARKYNIAVVV 183 (256)
T ss_dssp STTTHHHHHHHHHHHHHHHHHHHHHTT-EEEE
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhCCceEEe
Confidence 1111 44578888999977654
No 427
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=58.00 E-value=57 Score=26.35 Aligned_cols=85 Identities=16% Similarity=0.239 Sum_probs=43.9
Q ss_pred hhcccCCcEEEEe--cCCChHHHHhhcCCCceEEEEe-CCCCCccccc-c-----HHHHHHHHHHcC--CEEEEeCccCC
Q 021783 33 RVTPKTGVVVKRV--NTCDLDEVASAIGPWTKLVWVE-SPTNPRQQIC-D-----IRKIAEMAHAHG--ALLLVDNSIMS 101 (307)
Q Consensus 33 ~~~~~~g~~~~~v--~~~d~~~l~~~l~~~~~~v~~~-~~~n~tG~~~-~-----~~~l~~~~~~~~--~~li~D~a~~~ 101 (307)
+.++..|++.... |...++.++..+..--.+++++ .|.. .|..+ + ++++.+..+++| +.+.+|+--..
T Consensus 100 ~~ik~~g~k~GlalnP~Tp~~~i~~~l~~~D~vlvMtV~PGf-gGq~fi~~~lekI~~l~~~~~~~~~~~~I~vdGGI~~ 178 (220)
T PRK08883 100 QLIKEHGCQAGVVLNPATPLHHLEYIMDKVDLILLMSVNPGF-GGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGVKV 178 (220)
T ss_pred HHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCeEEEEEecCCC-CCceecHhHHHHHHHHHHHHHhcCCCeeEEEECCCCH
Confidence 4456677664332 3346677777766322333333 5544 24332 2 444444444443 77778875443
Q ss_pred CCcCCccCCCccEEEec
Q 021783 102 PVLSRPLELGADIVMHS 118 (307)
Q Consensus 102 ~~~~~~~~~~~d~~~~s 118 (307)
.......+.|+|.++.+
T Consensus 179 eni~~l~~aGAd~vVvG 195 (220)
T PRK08883 179 DNIREIAEAGADMFVAG 195 (220)
T ss_pred HHHHHHHHcCCCEEEEe
Confidence 33334445677766643
No 428
>PRK14057 epimerase; Provisional
Probab=57.34 E-value=63 Score=26.75 Aligned_cols=76 Identities=12% Similarity=0.202 Sum_probs=44.6
Q ss_pred EEEecCCChHHHHhhcCC-CceEEEEeCCCCCccccc-c-----HHHHHHHHHHcC--CEEEEeCccCCCCcCCccCCCc
Q 021783 42 VKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQIC-D-----IRKIAEMAHAHG--ALLLVDNSIMSPVLSRPLELGA 112 (307)
Q Consensus 42 ~~~v~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~-~-----~~~l~~~~~~~~--~~li~D~a~~~~~~~~~~~~~~ 112 (307)
+..-|...++.++..+.. ..-+++...|.. .|..+ + ++++.++.++++ +.+-+|+--.........+.|+
T Consensus 137 lAlnP~Tp~e~i~~~l~~vD~VLvMtV~PGf-gGQ~Fi~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~ti~~l~~aGa 215 (254)
T PRK14057 137 ISLCPATPLDVIIPILSDVEVIQLLAVNPGY-GSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQGI 215 (254)
T ss_pred EEECCCCCHHHHHHHHHhCCEEEEEEECCCC-CchhccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHCCC
Confidence 444445578888887763 222333335655 35544 2 455555655654 7788998655444444556688
Q ss_pred cEEEec
Q 021783 113 DIVMHS 118 (307)
Q Consensus 113 d~~~~s 118 (307)
|+++.+
T Consensus 216 d~~V~G 221 (254)
T PRK14057 216 DRVVSG 221 (254)
T ss_pred CEEEEC
Confidence 988764
No 429
>TIGR00608 radc DNA repair protein radc. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=56.97 E-value=22 Score=28.66 Aligned_cols=43 Identities=14% Similarity=0.172 Sum_probs=29.6
Q ss_pred HHHHhhcCCCceEEEEeCCCCCcccccc-------HHHHHHHHHHcCCEEE
Q 021783 51 DEVASAIGPWTKLVWVESPTNPRQQICD-------IRKIAEMAHAHGALLL 94 (307)
Q Consensus 51 ~~l~~~l~~~~~~v~~~~~~n~tG~~~~-------~~~l~~~~~~~~~~li 94 (307)
+-++.++..+...|++.| |+|+|...| -++|.+.++--|+.++
T Consensus 150 eI~~~Al~~~A~~vIlaH-NHPSG~~~PS~~Di~~T~~l~~a~~~lgI~ll 199 (218)
T TIGR00608 150 EIFKEALKLSASALILAH-NHPSGEPSPSQEDILITERLRKAAELLGIELL 199 (218)
T ss_pred HHHHHHHHhhCCeEEEEe-ecCCCCCCCCHHHHHHHHHHHHHHHhCCCEEe
Confidence 456777776666666654 668888865 5577888887777554
No 430
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=56.45 E-value=58 Score=27.84 Aligned_cols=82 Identities=13% Similarity=0.165 Sum_probs=55.0
Q ss_pred CeE-EEcCCCCc---chHHHHhhhcccCCcEEEEecCC---ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHH
Q 021783 15 EEI-VAGDDLYG---GTDRLLSRVTPKTGVVVKRVNTC---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH 87 (307)
Q Consensus 15 d~V-lv~~~~~~---~~~~~~~~~~~~~g~~~~~v~~~---d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~ 87 (307)
.+| ++-+|... +....+...++..|.++++.... |.....+.+..++.+|++..-++ ...-.+.+...+.
T Consensus 160 k~Igv~Y~p~E~ns~~l~eelk~~A~~~Gl~vve~~v~~~ndi~~a~~~l~g~~d~i~~p~dn~---i~s~~~~l~~~a~ 236 (322)
T COG2984 160 KSIGVLYNPGEANSVSLVEELKKEARKAGLEVVEAAVTSVNDIPRAVQALLGKVDVIYIPTDNL---IVSAIESLLQVAN 236 (322)
T ss_pred eeEEEEeCCCCcccHHHHHHHHHHHHHCCCEEEEEecCcccccHHHHHHhcCCCcEEEEecchH---HHHHHHHHHHHHH
Confidence 344 55555552 23344668889999999998875 44444555557888888642221 1224888999999
Q ss_pred HcCCEEEEeCcc
Q 021783 88 AHGALLLVDNSI 99 (307)
Q Consensus 88 ~~~~~li~D~a~ 99 (307)
+.+++++-++.-
T Consensus 237 ~~kiPli~sd~~ 248 (322)
T COG2984 237 KAKIPLIASDTS 248 (322)
T ss_pred HhCCCeecCCHH
Confidence 999999987753
No 431
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=56.39 E-value=44 Score=24.62 Aligned_cols=67 Identities=13% Similarity=0.127 Sum_probs=46.4
Q ss_pred CCcchHHHHhhhcccCCcEEEEecCC-ChHHHHhhc-CCCceEEEEeCCCCCccccccHHHHHHHHHHcCC
Q 021783 23 LYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAI-GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGA 91 (307)
Q Consensus 23 ~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l-~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~ 91 (307)
.|.--.+.+...++..|.+++....+ .++++.++. ..++.+|.+++.. +.....++++.+.+++.|+
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~--~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLY--GHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--ccCHHHHHHHHHHHHHCCC
Confidence 34333445567788999999988875 667765554 4678888876554 2344468899999998863
No 432
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=56.35 E-value=53 Score=21.33 Aligned_cols=56 Identities=13% Similarity=0.157 Sum_probs=34.1
Q ss_pred cccC-CcEEEEecCCChHHHH--hhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 021783 35 TPKT-GVVVKRVNTCDLDEVA--SAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 94 (307)
Q Consensus 35 ~~~~-g~~~~~v~~~d~~~l~--~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li 94 (307)
+... |.++..++........ ..++++.-+++++. +|...+..++++.++++|+.++
T Consensus 20 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~----sg~t~~~~~~~~~a~~~g~~ii 78 (87)
T cd04795 20 LLELTGIEVVALIATELEHASLLSLLRKGDVVIALSY----SGRTEELLAALEIAKELGIPVI 78 (87)
T ss_pred HhcccCCceEEeCCcHHHHHHHHhcCCCCCEEEEEEC----CCCCHHHHHHHHHHHHcCCeEE
Confidence 3344 7777665543333332 33445555666543 3555678889999999987765
No 433
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=56.35 E-value=38 Score=24.72 Aligned_cols=60 Identities=17% Similarity=0.138 Sum_probs=37.9
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcC---CCceEEEEeCCCCC
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIG---PWTKLVWVESPTNP 72 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~---~~~~~v~~~~~~n~ 72 (307)
.-||+++ ....+.++...+...++..|.++..... +|.+++.+++. .+..+|+++.-..+
T Consensus 6 ~~G~El~-~g~i~d~n~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~i~~~~~~~DlvittGG~g~ 70 (133)
T cd00758 6 TVSDELS-QGQIEDTNGPALEALLEDLGCEVIYAGVVPDDADSIRAALIEASREADLVLTTGGTGV 70 (133)
T ss_pred EeCcccc-CCceEEchHHHHHHHHHHCCCEEEEeeecCCCHHHHHHHHHHHHhcCCEEEECCCCCC
Confidence 3467764 2333445555566778889998877643 67777777765 34677776644443
No 434
>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism]
Probab=56.15 E-value=19 Score=28.98 Aligned_cols=38 Identities=18% Similarity=0.247 Sum_probs=29.6
Q ss_pred HhhhcccCCcEEEEecCCChHHHHhhcC------CCceEEEEeC
Q 021783 31 LSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLVWVES 68 (307)
Q Consensus 31 ~~~~~~~~g~~~~~v~~~d~~~l~~~l~------~~~~~v~~~~ 68 (307)
+..-.+.+|.++..++.+|.+++.+++. .++++|+..+
T Consensus 197 L~~k~eAFGw~V~evdG~d~~~i~~a~~~~~~~~~rP~~IIa~T 240 (243)
T COG3959 197 LADKWEAFGWEVIEVDGHDIEEIVEALEKAKGSKGRPTVIIAKT 240 (243)
T ss_pred hHHHHHhcCceEEEEcCcCHHHHHHHHHhhhccCCCCeEEEEec
Confidence 4466788999999999999998888775 2677777643
No 435
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=55.80 E-value=38 Score=24.71 Aligned_cols=59 Identities=24% Similarity=0.407 Sum_probs=35.8
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcC---CCceEEEEeCCCC
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIG---PWTKLVWVESPTN 71 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~---~~~~~v~~~~~~n 71 (307)
-||+++-....+..+...+...++..|+++..... +|.+.+.+.+. .+..+|+++.-..
T Consensus 5 ~GdEi~~~~~~~d~~~~~l~~~l~~~G~~~~~~~~v~Dd~~~I~~~l~~~~~~~dliittGG~g 68 (135)
T smart00852 5 TGDELLSGGQIYDSNGPALAELLTELGIEVTRYVIVPDDKEAIKEALREALERADLVITTGGTG 68 (135)
T ss_pred EechhhcCCCcccCcHHHHHHHHHHCCCeEEEEEEeCCCHHHHHHHHHHHHhCCCEEEEcCCCC
Confidence 36776543222445555566788899987655433 68777777765 3456666654433
No 436
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=55.50 E-value=20 Score=25.92 Aligned_cols=45 Identities=20% Similarity=0.166 Sum_probs=25.3
Q ss_pred ChH-HHHhhcCCCceEEEEeCCCCCcccccc-------HHHHHHHHHHcCCEEE
Q 021783 49 DLD-EVASAIGPWTKLVWVESPTNPRQQICD-------IRKIAEMAHAHGALLL 94 (307)
Q Consensus 49 d~~-~l~~~l~~~~~~v~~~~~~n~tG~~~~-------~~~l~~~~~~~~~~li 94 (307)
++. -+++++..+...+++.| |+|+|...| -++|.+.++..|+.++
T Consensus 52 ~~R~I~~~al~~~A~~vIl~H-NHPsG~~~PS~~D~~~T~~L~~~~~~l~I~ll 104 (123)
T PF04002_consen 52 DPREIFRRALRLNASSVILAH-NHPSGDPEPSDADIALTRRLKKAARLLGIELL 104 (123)
T ss_dssp SHHHHHHHHHHTT-SEEEEEE-E-TTS--S--HHHHHHHHHHHHHHHHHT-EEE
T ss_pred cHHHHHHHHHhhCCceEEEEE-EcCCCCCCCCHhHHHHHHHHHHHHHHcCCeee
Confidence 454 45666665555565554 567788765 4688888888877553
No 437
>PRK09354 recA recombinase A; Provisional
Probab=54.99 E-value=64 Score=28.15 Aligned_cols=17 Identities=12% Similarity=0.274 Sum_probs=10.4
Q ss_pred HHHHHHHHHHcCCEEEE
Q 021783 79 IRKIAEMAHAHGALLLV 95 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~ 95 (307)
+.+|..+++++|+.+|+
T Consensus 176 Lr~L~~~l~k~~itvI~ 192 (349)
T PRK09354 176 LRKLTGNISKSNTTVIF 192 (349)
T ss_pred HHHHHHHHHHcCcEEEE
Confidence 45566666777765553
No 438
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=54.84 E-value=27 Score=28.68 Aligned_cols=23 Identities=22% Similarity=0.296 Sum_probs=21.4
Q ss_pred ccHHHHHHHHHHcCCEEEEeCcc
Q 021783 77 CDIRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 77 ~~~~~l~~~~~~~~~~li~D~a~ 99 (307)
.+.+++.++.+++++-+++|++|
T Consensus 53 l~~e~l~~~l~e~~i~llIDATH 75 (257)
T COG2099 53 LGAEGLAAFLREEGIDLLIDATH 75 (257)
T ss_pred CCHHHHHHHHHHcCCCEEEECCC
Confidence 35899999999999999999998
No 439
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=54.73 E-value=14 Score=33.75 Aligned_cols=31 Identities=10% Similarity=0.114 Sum_probs=27.6
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeCcc
Q 021783 69 PTNPRQQICDIRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 69 ~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~ 99 (307)
+....|...+++++++.||++|+.||.|.+.
T Consensus 73 id~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 73 VRTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred cCcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3456788889999999999999999999995
No 440
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=54.05 E-value=57 Score=28.12 Aligned_cols=25 Identities=12% Similarity=0.143 Sum_probs=16.1
Q ss_pred CCHHHHHHHHhcCCcceeecCCCCc
Q 021783 228 GSLALSKHVVETTKYFSITVSFGSV 252 (307)
Q Consensus 228 ~~~~~~~~~~~~l~~~gi~v~~g~~ 252 (307)
.+.+....+++...+.|+....|+-
T Consensus 262 ~Gi~~~~~~~~~a~~~g~i~k~g~w 286 (321)
T TIGR02012 262 EGISKLGEIIDLAVELDIIKKAGSW 286 (321)
T ss_pred CccchhhHHHHHHHhCCcEEcccCE
Confidence 4555566777766667787766643
No 441
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=54.04 E-value=54 Score=23.92 Aligned_cols=69 Identities=19% Similarity=0.228 Sum_probs=46.5
Q ss_pred HHHHhhhcccCCcEEEEecCC-ChHHHHhhc-CCCceEEEEeCCCCCccccccHHHHHHHHHHcC---CEEEEeCc
Q 021783 28 DRLLSRVTPKTGVVVKRVNTC-DLDEVASAI-GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG---ALLLVDNS 98 (307)
Q Consensus 28 ~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l-~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~---~~li~D~a 98 (307)
.+.+...++..|.+++..-.+ .++++.++. ..++.+|.+++.. |.....++++.+..++.| +.+++=++
T Consensus 16 kniv~~~L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~--t~~~~~~~~~~~~l~~~gl~~v~vivGG~ 89 (128)
T cd02072 16 NKILDHAFTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLY--GHGEIDCKGLREKCDEAGLKDILLYVGGN 89 (128)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cCCHHHHHHHHHHHHHCCCCCCeEEEECC
Confidence 344556778899999888775 566665554 5678888876543 334556888999988875 34555443
No 442
>PRK13566 anthranilate synthase; Provisional
Probab=53.72 E-value=59 Score=31.54 Aligned_cols=78 Identities=21% Similarity=0.202 Sum_probs=50.8
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEe-CCCCCccccccHHHHHHHHHHcC
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE-SPTNPRQQICDIRKIAEMAHAHG 90 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~-~~~n~tG~~~~~~~l~~~~~~~~ 90 (307)
+.|.+|++-+... +....+..+++..|+++..++.+..+++... .++.+|++. .|.+|. -.+..++.+.+.+.+
T Consensus 524 ~~g~~IlvID~~d-sf~~~l~~~Lr~~G~~v~vv~~~~~~~~~~~--~~~DgVVLsgGpgsp~--d~~~~~lI~~a~~~~ 598 (720)
T PRK13566 524 GEGKRVLLVDHED-SFVHTLANYFRQTGAEVTTVRYGFAEEMLDR--VNPDLVVLSPGPGRPS--DFDCKATIDAALARN 598 (720)
T ss_pred CCCCEEEEEECCC-chHHHHHHHHHHCCCEEEEEECCCChhHhhh--cCCCEEEECCCCCChh--hCCcHHHHHHHHHCC
Confidence 3577899888874 5566677888899999999887633332222 245566664 565542 234667777777777
Q ss_pred CEEE
Q 021783 91 ALLL 94 (307)
Q Consensus 91 ~~li 94 (307)
++++
T Consensus 599 iPIL 602 (720)
T PRK13566 599 LPIF 602 (720)
T ss_pred CcEE
Confidence 6654
No 443
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=53.69 E-value=33 Score=28.37 Aligned_cols=85 Identities=20% Similarity=0.332 Sum_probs=54.3
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcC---CCceEEEEeCCCCCccccccHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
++--||+||.-.-.- .+...+.+.+...|.++..+-. ||++++.+.++ .+..+|+++..--||-.-...+.+
T Consensus 6 iI~vG~ElL~G~ivd-tNa~~la~~L~~~G~~v~~~~~VgD~~~~I~~~l~~a~~r~D~vI~tGGLGPT~DDiT~e~v-- 82 (255)
T COG1058 6 IIAVGDELLSGRIVD-TNAAFLADELTELGVDLARITTVGDNPDRIVEALREASERADVVITTGGLGPTHDDLTAEAV-- 82 (255)
T ss_pred EEEEccceecCceec-chHHHHHHHHHhcCceEEEEEecCCCHHHHHHHHHHHHhCCCEEEECCCcCCCccHhHHHHH--
Confidence 345688888655433 3333344667788988877765 68888877776 568889988766666443334433
Q ss_pred HHHHcCCEEEEeCc
Q 021783 85 MAHAHGALLLVDNS 98 (307)
Q Consensus 85 ~~~~~~~~li~D~a 98 (307)
|+..|..++.|+-
T Consensus 83 -Aka~g~~lv~~~~ 95 (255)
T COG1058 83 -AKALGRPLVLDEE 95 (255)
T ss_pred -HHHhCCCcccCHH
Confidence 4445666777654
No 444
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=53.31 E-value=1e+02 Score=26.36 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=28.1
Q ss_pred EEEEeCCCCCcccccc-HHHHHHHHHHcCCEEEEeCcc
Q 021783 63 LVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 63 ~v~~~~~~n~tG~~~~-~~~l~~~~~~~~~~li~D~a~ 99 (307)
+|++ +.+=|.|...+ ..+|.++|++.|..++.|...
T Consensus 132 ~Vvl-sGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 132 IVVL-SGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred EEEE-eCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 3444 34556677765 999999999999999999864
No 445
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=53.24 E-value=1.2e+02 Score=24.28 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=21.3
Q ss_pred CCceEEEEeCCCCCc-----cc---------ccc-HHHHHHHHHHcCCEEEE
Q 021783 59 PWTKLVWVESPTNPR-----QQ---------ICD-IRKIAEMAHAHGALLLV 95 (307)
Q Consensus 59 ~~~~~v~~~~~~n~t-----G~---------~~~-~~~l~~~~~~~~~~li~ 95 (307)
.++++|++++.+... +. +.. +..|..+|+++++.+++
T Consensus 113 ~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~ 164 (226)
T cd01393 113 GRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVF 164 (226)
T ss_pred CCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEE
Confidence 367788888765421 11 001 34577777888876664
No 446
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=52.98 E-value=13 Score=31.26 Aligned_cols=32 Identities=16% Similarity=0.227 Sum_probs=27.5
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 69 PTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 69 ~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+....|..-+++++++.||++|+.||.|-+..
T Consensus 44 vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 44 VDPRFGTMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp ESTTTBHHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred cccccchhhhhhhhhhccccccceEEEeeecc
Confidence 34456888899999999999999999999963
No 447
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=52.82 E-value=48 Score=28.48 Aligned_cols=73 Identities=16% Similarity=0.121 Sum_probs=44.8
Q ss_pred cCCCCcchHHHHhhhccc--CCcEEEEecCC-ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHH-HcCCEEEE
Q 021783 20 GDDLYGGTDRLLSRVTPK--TGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH-AHGALLLV 95 (307)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~--~g~~~~~v~~~-d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~-~~~~~li~ 95 (307)
--|.|.+.. .+.+. .++-++.+|.. -++.+++.++...+++++-+-.-|. .+..++.++++ ++|+.++=
T Consensus 73 Gvpvy~sv~----ea~~~~~~D~avI~VPa~~v~dai~Ea~~aGI~~~ViiteGfpe---~d~~~l~~~~~~~~g~rliG 145 (317)
T PTZ00187 73 GLPVFATVK----EAKKATGADASVIYVPPPHAASAIIEAIEAEIPLVVCITEGIPQ---HDMVKVKHALLSQNKTRLIG 145 (317)
T ss_pred CccccCCHH----HHhcccCCCEEEEecCHHHHHHHHHHHHHcCCCEEEEECCCCch---hhHHHHHHHHhhcCCCEEEC
Confidence 678887777 44454 56667777754 4677888888777776654332221 23455555654 57887775
Q ss_pred eCcc
Q 021783 96 DNSI 99 (307)
Q Consensus 96 D~a~ 99 (307)
=++.
T Consensus 146 PNc~ 149 (317)
T PTZ00187 146 PNCP 149 (317)
T ss_pred CCCc
Confidence 4443
No 448
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=52.62 E-value=27 Score=25.32 Aligned_cols=39 Identities=13% Similarity=0.036 Sum_probs=23.8
Q ss_pred HHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 51 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 51 ~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
+.+++.+..++-+++++.-. .+.+++.++|++++++++.
T Consensus 72 ~~l~~l~~~~~P~iIvt~~~------~~p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 72 ERLEKLFSYNPPCIIVTRGL------EPPPELIELAEKYNIPLLR 110 (127)
T ss_dssp CHHHHHCTTT-S-EEEETTT---------HHHHHHHHHCT--EEE
T ss_pred HHHHHHhCCCCCEEEEECcC------CCCHHHHHHHHHhCCcEEE
Confidence 34556666777778876543 3578899999999998875
No 449
>PRK00024 hypothetical protein; Reviewed
Probab=52.59 E-value=24 Score=28.56 Aligned_cols=43 Identities=16% Similarity=0.186 Sum_probs=29.5
Q ss_pred HHHHhhcCCCceEEEEeCCCCCcccccc-------HHHHHHHHHHcCCEEE
Q 021783 51 DEVASAIGPWTKLVWVESPTNPRQQICD-------IRKIAEMAHAHGALLL 94 (307)
Q Consensus 51 ~~l~~~l~~~~~~v~~~~~~n~tG~~~~-------~~~l~~~~~~~~~~li 94 (307)
+-++.++..+...|++.| |+|+|...| -++|.+.++--|+.++
T Consensus 156 ei~~~Al~~~A~~iIl~H-NHPSG~~~PS~~D~~~T~~l~~a~~~l~I~ll 205 (224)
T PRK00024 156 EIVKRALKLNAAALILAH-NHPSGDPEPSQADILITKRLKEAGELLGIRLL 205 (224)
T ss_pred HHHHHHHHhhccceEEEe-cCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEe
Confidence 456777776666666654 668898875 5577777777777554
No 450
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=52.44 E-value=39 Score=26.01 Aligned_cols=83 Identities=22% Similarity=0.330 Sum_probs=46.4
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEec--CCChHHHHhhcC---CCceEEEEeCCCCCccccccHHHHHHHH
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN--TCDLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMA 86 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~--~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~~~~l~~~~ 86 (307)
.-||+++. .-...++...+...++..|.++..+. .+|.+.+.+.+. .+..+|+++....|+..-.-.+.+.+..
T Consensus 6 ~~GdEl~~-G~i~d~n~~~l~~~L~~~G~~v~~~~~v~Dd~~~I~~~l~~~~~~~dlVIttGG~G~t~~D~t~ea~~~~~ 84 (170)
T cd00885 6 AIGDELLS-GQIVDTNAAFLAKELAELGIEVYRVTVVGDDEDRIAEALRRASERADLVITTGGLGPTHDDLTREAVAKAF 84 (170)
T ss_pred EECccccC-CeEEEhHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCEEEECCCCCCCCCChHHHHHHHHh
Confidence 34666652 22233444456677888998876644 367777777765 3566777775555544333344444432
Q ss_pred HHcCCEEEEeCc
Q 021783 87 HAHGALLLVDNS 98 (307)
Q Consensus 87 ~~~~~~li~D~a 98 (307)
|..++.|+.
T Consensus 85 ---~~~l~~~~e 93 (170)
T cd00885 85 ---GRPLVLDEE 93 (170)
T ss_pred ---CCCcccCHH
Confidence 444444443
No 451
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=52.41 E-value=16 Score=34.02 Aligned_cols=28 Identities=18% Similarity=0.217 Sum_probs=23.9
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.|...+++++++.||++|+-||.|-++.
T Consensus 156 ~G~~~e~k~lV~~aH~~Gi~VilD~V~N 183 (542)
T TIGR02402 156 YGGPDDLKALVDAAHGLGLGVILDVVYN 183 (542)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 3444569999999999999999999975
No 452
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=52.18 E-value=29 Score=25.74 Aligned_cols=48 Identities=19% Similarity=0.241 Sum_probs=31.7
Q ss_pred cchHHHHhhhcccCCcEEEEecC--CChHHHHhhcC---CCceEEEEeCCCCC
Q 021783 25 GGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIG---PWTKLVWVESPTNP 72 (307)
Q Consensus 25 ~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~---~~~~~v~~~~~~n~ 72 (307)
.++...+...++..|+++..... +|.+++.+.+. .+..+|+++.-..+
T Consensus 26 d~n~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~DliIttGG~g~ 78 (144)
T TIGR00177 26 DSNGPLLAALLEEAGFNVSRLGIVPDDPEEIREILRKAVDEADVVLTTGGTGV 78 (144)
T ss_pred eCcHHHHHHHHHHCCCeEEEEeecCCCHHHHHHHHHHHHhCCCEEEECCCCCC
Confidence 34444556778889998887664 57887777765 35667777644443
No 453
>PF00834 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase family; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Ralstonia eutropha (Alcaligenes eutrophus) two copies of the gene coding for PPE are known [], one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process; PDB: 3CTL_A 3CT7_D 3CU2_A 1RPX_A 3OVR_A 3OVP_A 3OVQ_B 3QC3_B 3INP_A 1TQJ_D ....
Probab=52.15 E-value=35 Score=27.08 Aligned_cols=84 Identities=18% Similarity=0.251 Sum_probs=47.1
Q ss_pred hhcccCCcEEE--EecCCChHHHHhhcCCCceEEE-Ee-CCCCCcccccc------HHHHHHHHHHc--CCEEEEeCccC
Q 021783 33 RVTPKTGVVVK--RVNTCDLDEVASAIGPWTKLVW-VE-SPTNPRQQICD------IRKIAEMAHAH--GALLLVDNSIM 100 (307)
Q Consensus 33 ~~~~~~g~~~~--~v~~~d~~~l~~~l~~~~~~v~-~~-~~~n~tG~~~~------~~~l~~~~~~~--~~~li~D~a~~ 100 (307)
+.++..|.++- .-|...++.++..+.. ...|. ++ .|.. .|..+. ++++.++..++ ++.+-+|+--.
T Consensus 99 ~~ik~~g~k~GialnP~T~~~~~~~~l~~-vD~VlvMsV~PG~-~Gq~f~~~~~~KI~~l~~~~~~~~~~~~I~vDGGI~ 176 (201)
T PF00834_consen 99 KYIKEAGIKAGIALNPETPVEELEPYLDQ-VDMVLVMSVEPGF-GGQKFIPEVLEKIRELRKLIPENGLDFEIEVDGGIN 176 (201)
T ss_dssp HHHHHTTSEEEEEE-TTS-GGGGTTTGCC-SSEEEEESS-TTT-SSB--HGGHHHHHHHHHHHHHHHTCGSEEEEESSES
T ss_pred HHHHHhCCCEEEEEECCCCchHHHHHhhh-cCEEEEEEecCCC-CcccccHHHHHHHHHHHHHHHhcCCceEEEEECCCC
Confidence 55666776643 3344566777776663 33333 33 4433 455542 55666666664 58999999776
Q ss_pred CCCcCCccCCCccEEEec
Q 021783 101 SPVLSRPLELGADIVMHS 118 (307)
Q Consensus 101 ~~~~~~~~~~~~d~~~~s 118 (307)
....+...+.|+|+++.+
T Consensus 177 ~~~~~~~~~aGad~~V~G 194 (201)
T PF00834_consen 177 EENIKQLVEAGADIFVAG 194 (201)
T ss_dssp TTTHHHHHHHT--EEEES
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 666555566788877765
No 454
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.10 E-value=25 Score=28.62 Aligned_cols=50 Identities=16% Similarity=0.172 Sum_probs=32.9
Q ss_pred ChHHHHhhcC----CCceEEEEeCCCCCcccccc-----HHHHHHHHHHcCCEEEEeCccCC
Q 021783 49 DLDEVASAIG----PWTKLVWVESPTNPRQQICD-----IRKIAEMAHAHGALLLVDNSIMS 101 (307)
Q Consensus 49 d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~-----~~~l~~~~~~~~~~li~D~a~~~ 101 (307)
+.+++.+.+. .-+-++. .+|..|..+. ++.+.+-.+++|++++-|.+.+.
T Consensus 104 s~~e~~~rl~~a~~~v~~~~G---lnNhmGs~~tsn~~aM~~~m~~Lk~r~l~flDs~T~a~ 162 (250)
T COG2861 104 SAEEILRRLRKAMNKVPDAVG---LNNHMGSRFTSNEDAMEKLMEALKERGLYFLDSGTIAN 162 (250)
T ss_pred CHHHHHHHHHHHHhhCcccee---ehhhhhhhhcCcHHHHHHHHHHHHHCCeEEEccccccc
Confidence 3445544443 3333343 4677777762 88999999999988887776553
No 455
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=51.70 E-value=42 Score=27.22 Aligned_cols=34 Identities=18% Similarity=0.108 Sum_probs=27.2
Q ss_pred CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 021783 60 WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 94 (307)
Q Consensus 60 ~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li 94 (307)
.+..++++ .-|..|...+.+++.++|++||+.++
T Consensus 172 ~P~~vicE-il~~dG~ma~~~~l~~fA~~~~l~ii 205 (230)
T PRK00014 172 RPAGVLCE-LMNADGTMMRGASLERYAAKEGLVAL 205 (230)
T ss_pred CceEEEEE-EeCCCCCccCHHHHHHHHHHcCCcEE
Confidence 34555555 35667999999999999999999886
No 456
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=51.54 E-value=93 Score=27.46 Aligned_cols=51 Identities=12% Similarity=0.255 Sum_probs=32.9
Q ss_pred ecCCChHHHHhhcC-CCceEEEEeCCCCCc--------ccccc----HHHHHHHHHHcCCEEEE
Q 021783 45 VNTCDLDEVASAIG-PWTKLVWVESPTNPR--------QQICD----IRKIAEMAHAHGALLLV 95 (307)
Q Consensus 45 v~~~d~~~l~~~l~-~~~~~v~~~~~~n~t--------G~~~~----~~~l~~~~~~~~~~li~ 95 (307)
.+..+++++.+.+. .+++++++++.++.. |.... +.+|.++++++|+.++.
T Consensus 142 ~~e~~le~I~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 142 LAETNLEDILASIEELKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred EccCcHHHHHHHHHhcCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 34457777777775 578889988765432 11211 35678889999876654
No 457
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=50.71 E-value=84 Score=27.91 Aligned_cols=86 Identities=17% Similarity=0.232 Sum_probs=52.3
Q ss_pred CCCeEE-EcCCCCc-chHHHHhhhcccCCcEEEEecCCChHHHHhhcC--CCceEEEEeCCCCCccccccHHHHHHHHHH
Q 021783 13 TGEEIV-AGDDLYG-GTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG--PWTKLVWVESPTNPRQQICDIRKIAEMAHA 88 (307)
Q Consensus 13 ~gd~Vl-v~~~~~~-~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~--~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~ 88 (307)
.|.+|. ++..+|- +....+..+++..|+++..+. +.+++.+.+. .+..+|+++.+.........+.++.++...
T Consensus 205 ~g~~V~lit~Dt~R~aa~eQL~~~a~~lgvpv~~~~--~~~~l~~~L~~~~~~DlVLIDTaGr~~~~~~~l~el~~~l~~ 282 (388)
T PRK12723 205 KSLNIKIITIDNYRIGAKKQIQTYGDIMGIPVKAIE--SFKDLKEEITQSKDFDLVLVDTIGKSPKDFMKLAEMKELLNA 282 (388)
T ss_pred CCCeEEEEeccCccHHHHHHHHHHhhcCCcceEeeC--cHHHHHHHHHHhCCCCEEEEcCCCCCccCHHHHHHHHHHHHh
Confidence 355554 4444442 334457777888888765433 4566666553 466788998665443444456777777664
Q ss_pred c----CCEEEEeCccC
Q 021783 89 H----GALLLVDNSIM 100 (307)
Q Consensus 89 ~----~~~li~D~a~~ 100 (307)
. ..+++.|++..
T Consensus 283 ~~~~~e~~LVlsat~~ 298 (388)
T PRK12723 283 CGRDAEFHLAVSSTTK 298 (388)
T ss_pred cCCCCeEEEEEcCCCC
Confidence 3 47788888665
No 458
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=50.35 E-value=38 Score=27.15 Aligned_cols=86 Identities=16% Similarity=0.253 Sum_probs=49.9
Q ss_pred hHHHHhhcCCCceEEEEeCCCCCccccc-cHHHHHHHHHHcCCEEEEeCccCC-C-CcCCccCCCc-cEEEecccccccc
Q 021783 50 LDEVASAIGPWTKLVWVESPTNPRQQIC-DIRKIAEMAHAHGALLLVDNSIMS-P-VLSRPLELGA-DIVMHSATKFIAG 125 (307)
Q Consensus 50 ~~~l~~~l~~~~~~v~~~~~~n~tG~~~-~~~~l~~~~~~~~~~li~D~a~~~-~-~~~~~~~~~~-d~~~~s~~K~~~g 125 (307)
.+.+++++....+++-+---+..+-... -.+++.++|++|++.+++++-.-. . .-.+..+.|- |.-.....|.+ +
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdGVHlGq~D~~~~~ar~~~-~ 102 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEYLALAEKLRALCQKYGVPLIINDRVDLALAVGADGVHLGQDDMPLAEARELL-G 102 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCEEEcCCcccchHHHHHhc-C
Confidence 6888888887766666554444333323 368999999999999998774321 1 1112222222 34444445555 3
Q ss_pred CCCceeEEEEEc
Q 021783 126 HSDVMAGVLAVK 137 (307)
Q Consensus 126 ~~g~~~G~~~~~ 137 (307)
++.++|+-+-+
T Consensus 103 -~~~iIG~S~h~ 113 (211)
T COG0352 103 -PGLIIGLSTHD 113 (211)
T ss_pred -CCCEEEeecCC
Confidence 35556665543
No 459
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=50.29 E-value=47 Score=26.35 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=27.3
Q ss_pred CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 021783 60 WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 94 (307)
Q Consensus 60 ~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li 94 (307)
.+.+++++- -|..|...+.+++.++|++|++.++
T Consensus 157 ~p~~vicEi-l~~dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 157 KPAGVICEM-MNDDGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred CceEEEEEE-eCCCCCccCHHHHHHHHHHcCCcEE
Confidence 355555554 4568999999999999999999886
No 460
>PLN02274 inosine-5'-monophosphate dehydrogenase
Probab=50.25 E-value=99 Score=28.61 Aligned_cols=109 Identities=21% Similarity=0.239 Sum_probs=61.7
Q ss_pred HHhcCCCCeEEEcCCCCcchHHH---HhhhcccC-CcEEEEecCCChHHHHhhcCCCceEEEEe-CCC----C--Cc--c
Q 021783 8 THLLGTGEEIVAGDDLYGGTDRL---LSRVTPKT-GVVVKRVNTCDLDEVASAIGPWTKLVWVE-SPT----N--PR--Q 74 (307)
Q Consensus 8 ~~~~~~gd~Vlv~~~~~~~~~~~---~~~~~~~~-g~~~~~v~~~d~~~l~~~l~~~~~~v~~~-~~~----n--~t--G 74 (307)
.++++.|-.|++-+..|...... ++.+-+.+ +..++--+..+.++-+.+++-...+|.+. ++. + .+ |
T Consensus 254 ~~l~~ag~d~i~iD~~~g~~~~~~~~i~~ik~~~p~~~vi~g~v~t~e~a~~a~~aGaD~i~vg~g~G~~~~t~~~~~~g 333 (505)
T PLN02274 254 EHLVKAGVDVVVLDSSQGDSIYQLEMIKYIKKTYPELDVIGGNVVTMYQAQNLIQAGVDGLRVGMGSGSICTTQEVCAVG 333 (505)
T ss_pred HHHHHcCCCEEEEeCCCCCcHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHcCcCEEEECCCCCccccCccccccC
Confidence 34566675666656666554432 22222223 35544435567788777777666666553 111 1 12 2
Q ss_pred ccc--cHHHHHHHHHHcCCEEEEeCccCCCC-cCCccCCCccEEE
Q 021783 75 QIC--DIRKIAEMAHAHGALLLVDNSIMSPV-LSRPLELGADIVM 116 (307)
Q Consensus 75 ~~~--~~~~l~~~~~~~~~~li~D~a~~~~~-~~~~~~~~~d~~~ 116 (307)
... .+..+.+++++.++++|.|+-...+. .......|++.++
T Consensus 334 ~~~~~~i~~~~~~~~~~~vpVIadGGI~~~~di~kAla~GA~~V~ 378 (505)
T PLN02274 334 RGQATAVYKVASIAAQHGVPVIADGGISNSGHIVKALTLGASTVM 378 (505)
T ss_pred CCcccHHHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 222 47778899999999999999765432 2244445655443
No 461
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=50.22 E-value=62 Score=20.32 Aligned_cols=61 Identities=16% Similarity=0.176 Sum_probs=35.0
Q ss_pred HhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEe
Q 021783 31 LSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 96 (307)
Q Consensus 31 ~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D 96 (307)
+..+++..|.++..+... .+.+.. ++..++++....+.+ ...+.++|.+++++=|-++|+|
T Consensus 10 ~~~~L~~~g~~v~~~~~~-~~~l~~---~~~tll~i~~~~~~~-~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 10 LYQLLEEQGVKVERWRKP-YEALEA---DDGTLLVIGPDLRLS-EPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHHCCCeeEEeccc-HHHhCC---CCCEEEEEeCCCCCC-chHHHHHHHHHHHcCCEEEEeC
Confidence 336667779998766542 444432 344444444322322 1345789999998766666654
No 462
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=50.20 E-value=99 Score=24.20 Aligned_cols=83 Identities=19% Similarity=0.181 Sum_probs=42.5
Q ss_pred hhcccCCcEEEE--ecCCChHHHHhhcCCCceEEEEeCCCCCcc---ccccHHHHHHHHHHcCCEEEEeCccCCCCcCCc
Q 021783 33 RVTPKTGVVVKR--VNTCDLDEVASAIGPWTKLVWVESPTNPRQ---QICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP 107 (307)
Q Consensus 33 ~~~~~~g~~~~~--v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG---~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~ 107 (307)
..++..|.++.. ....++++..+.+......+.+ +|...++ .....+++.++.+..++++.+|+--........
T Consensus 97 ~~~~~~g~~~~v~~~~~~t~~e~~~~~~~~~d~v~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~~~GGI~~~~i~~~ 175 (202)
T cd04726 97 KAAKKYGKEVQVDLIGVEDPEKRAKLLKLGVDIVIL-HRGIDAQAAGGWWPEDDLKKVKKLLGVKVAVAGGITPDTLPEF 175 (202)
T ss_pred HHHHHcCCeEEEEEeCCCCHHHHHHHHHCCCCEEEE-cCcccccccCCCCCHHHHHHHHhhcCCCEEEECCcCHHHHHHH
Confidence 556667777654 3445666665555544444444 2221112 223466676666656778888763331112233
Q ss_pred cCCCccEEE
Q 021783 108 LELGADIVM 116 (307)
Q Consensus 108 ~~~~~d~~~ 116 (307)
.+.|+|.++
T Consensus 176 ~~~Gad~vv 184 (202)
T cd04726 176 KKAGADIVI 184 (202)
T ss_pred HhcCCCEEE
Confidence 344666444
No 463
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=49.76 E-value=71 Score=22.85 Aligned_cols=67 Identities=12% Similarity=0.154 Sum_probs=44.2
Q ss_pred HHHhhhcccCCcEEEEecCC-ChHHHHhhc-CCCceEEEEeCCCCCccccccHHHHHHHHHHc---CCEEEEeC
Q 021783 29 RLLSRVTPKTGVVVKRVNTC-DLDEVASAI-GPWTKLVWVESPTNPRQQICDIRKIAEMAHAH---GALLLVDN 97 (307)
Q Consensus 29 ~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l-~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~---~~~li~D~ 97 (307)
..+..+++..|.+++....+ .++++.+.+ ..++.+|.++.... -....++++.+..++. ++.+++=+
T Consensus 17 ~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~--~~~~~~~~~~~~L~~~~~~~i~i~~GG 88 (122)
T cd02071 17 KVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSG--GHMTLFPEVIELLRELGAGDILVVGGG 88 (122)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccch--hhHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 44556778899999888764 556665554 46778888765432 2334578888888777 45666544
No 464
>PRK06559 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=49.30 E-value=34 Score=28.91 Aligned_cols=96 Identities=15% Similarity=0.188 Sum_probs=53.7
Q ss_pred CCeEEEcCCC---CcchHHHHhhhcccCC-cEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHc
Q 021783 14 GEEIVAGDDL---YGGTDRLLSRVTPKTG-VVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH 89 (307)
Q Consensus 14 gd~Vlv~~~~---~~~~~~~~~~~~~~~g-~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~ 89 (307)
-|.|++-+.= +.+....+..+.+... .+-+.+..++++++.+++......|.+++.+. .++++.+++.++
T Consensus 167 sD~iLIkdNHi~~~g~i~~av~~~r~~~~~~~kIeVEv~tleea~~a~~agaDiImLDnmsp-----e~l~~av~~~~~- 240 (290)
T PRK06559 167 SDAIMLKDNHIAAVGSVQKAIAQARAYAPFVKMVEVEVESLAAAEEAAAAGADIIMLDNMSL-----EQIEQAITLIAG- 240 (290)
T ss_pred cceEEEcHHHHHhhccHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHcCCCEEEECCCCH-----HHHHHHHHHhcC-
Confidence 3667765531 2233333434333333 34567778899999999988888888875432 356666666553
Q ss_pred CCEEEEeCccCCCCc----CCccCCCccEEEecc
Q 021783 90 GALLLVDNSIMSPVL----SRPLELGADIVMHSA 119 (307)
Q Consensus 90 ~~~li~D~a~~~~~~----~~~~~~~~d~~~~s~ 119 (307)
.+ ++-.+ .|.. ......|+|+++.|.
T Consensus 241 ~~--~leaS--GGI~~~ni~~yA~tGVD~Is~ga 270 (290)
T PRK06559 241 RS--RIECS--GNIDMTTISRFRGLAIDYVSSGS 270 (290)
T ss_pred ce--EEEEE--CCCCHHHHHHHHhcCCCEEEeCc
Confidence 22 22111 1221 234455888777654
No 465
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=49.08 E-value=1.1e+02 Score=24.68 Aligned_cols=85 Identities=18% Similarity=0.143 Sum_probs=47.4
Q ss_pred hhcccCCcEEEE--ecCCChHHHHhhcCC-CceEEEEeCCCCCccccc-c-----HHHHHHHHHHcC--CEEEEeCccCC
Q 021783 33 RVTPKTGVVVKR--VNTCDLDEVASAIGP-WTKLVWVESPTNPRQQIC-D-----IRKIAEMAHAHG--ALLLVDNSIMS 101 (307)
Q Consensus 33 ~~~~~~g~~~~~--v~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~-~-----~~~l~~~~~~~~--~~li~D~a~~~ 101 (307)
+.++..|++.-. =|...++.++..+.. +.-+++...|... |..+ + ++++.++..+++ +.+=+|+--..
T Consensus 104 ~~Ir~~g~k~GlalnP~T~~~~i~~~l~~vD~VlvMtV~PGf~-GQ~fi~~~l~KI~~l~~~~~~~~~~~~IeVDGGI~~ 182 (223)
T PRK08745 104 QLIKSHGCQAGLVLNPATPVDILDWVLPELDLVLVMSVNPGFG-GQAFIPSALDKLRAIRKKIDALGKPIRLEIDGGVKA 182 (223)
T ss_pred HHHHHCCCceeEEeCCCCCHHHHHHHHhhcCEEEEEEECCCCC-CccccHHHHHHHHHHHHHHHhcCCCeeEEEECCCCH
Confidence 455666765432 233467778777763 2233333366553 5554 2 445555555554 66788885443
Q ss_pred CCcCCccCCCccEEEec
Q 021783 102 PVLSRPLELGADIVMHS 118 (307)
Q Consensus 102 ~~~~~~~~~~~d~~~~s 118 (307)
-......+.|+|+++.+
T Consensus 183 eti~~l~~aGaDi~V~G 199 (223)
T PRK08745 183 DNIGAIAAAGADTFVAG 199 (223)
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 33344556688887754
No 466
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=48.99 E-value=1e+02 Score=27.13 Aligned_cols=70 Identities=13% Similarity=0.115 Sum_probs=43.6
Q ss_pred hhcccCCcEEEEecC--CChHHHHhhcC-----CCceEEEEe-CC-CCC--ccccccHHHHHHHHHHcCCEEEEeCccCC
Q 021783 33 RVTPKTGVVVKRVNT--CDLDEVASAIG-----PWTKLVWVE-SP-TNP--RQQICDIRKIAEMAHAHGALLLVDNSIMS 101 (307)
Q Consensus 33 ~~~~~~g~~~~~v~~--~d~~~l~~~l~-----~~~~~v~~~-~~-~n~--tG~~~~~~~l~~~~~~~~~~li~D~a~~~ 101 (307)
..+...|.++..=.. .+++++..++. .+..++++. .. +.| +-...|+..|..+-+.+++++++|..|+.
T Consensus 219 ~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~ 298 (360)
T PRK12595 219 KAAGRVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHST 298 (360)
T ss_pred HHHHccCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCC
Confidence 334445554433222 26666666654 345666664 22 223 22335899999988889999999999987
Q ss_pred C
Q 021783 102 P 102 (307)
Q Consensus 102 ~ 102 (307)
|
T Consensus 299 G 299 (360)
T PRK12595 299 G 299 (360)
T ss_pred c
Confidence 7
No 467
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=48.63 E-value=17 Score=34.46 Aligned_cols=29 Identities=17% Similarity=0.428 Sum_probs=24.4
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+++...+++++++.||++|+-||.|-++.
T Consensus 224 ~~~~~~efk~lV~~~H~~Gi~VilDvV~N 252 (605)
T TIGR02104 224 PATRIRELKQMIQALHENGIRVIMDVVYN 252 (605)
T ss_pred cchHHHHHHHHHHHHHHCCCEEEEEEEcC
Confidence 33345679999999999999999999975
No 468
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=48.60 E-value=35 Score=27.77 Aligned_cols=62 Identities=18% Similarity=0.178 Sum_probs=42.6
Q ss_pred HHHhhhcccCCcEEEEe-cCC-Ch----HHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 29 RLLSRVTPKTGVVVKRV-NTC-DL----DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 29 ~~~~~~~~~~g~~~~~v-~~~-d~----~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
..++..++..|.++..+ +.. |. +.++..+..++.+|++...... ....+.+-+++.|++++.
T Consensus 18 ~g~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~~-----~~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 18 KGAKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAISQGVDGIIVSPVDPD-----SLAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHHTTESEEEEESSSTT-----TTHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHHhcCCEEEecCCCHH-----HHHHHHHHHhhcCceEEE
Confidence 44667888899999886 543 43 4556666678888887654432 234566678888998886
No 469
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=48.39 E-value=18 Score=24.03 Aligned_cols=23 Identities=26% Similarity=0.468 Sum_probs=19.9
Q ss_pred cHHHHHHHHHHcCCEEEEeCccC
Q 021783 78 DIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
--.+|.++|+++|++++.|..-+
T Consensus 28 ~A~~I~~~A~e~~VPi~~~~~LA 50 (82)
T TIGR00789 28 VAERIIEIAKKHGIPIVEDPDLV 50 (82)
T ss_pred HHHHHHHHHHHcCCCEEeCHHHH
Confidence 37899999999999999998643
No 470
>PLN03244 alpha-amylase; Provisional
Probab=48.30 E-value=22 Score=34.46 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=28.7
Q ss_pred CCCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 68 SPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 68 ~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.+++..|..-+++++++.||+.|+-||.|-++.
T Consensus 432 ApssRYGTPeDLK~LVD~aH~~GI~VILDvV~N 464 (872)
T PLN03244 432 AASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHS 464 (872)
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEecCc
Confidence 355666777789999999999999999999986
No 471
>TIGR01060 eno phosphopyruvate hydratase. Alternate name: enolase
Probab=48.08 E-value=1.1e+02 Score=27.51 Aligned_cols=84 Identities=13% Similarity=0.113 Sum_probs=56.4
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccC--CcEEEEecC--CChHHHHhhcCCC-ceEEEEeCCCCCccccccHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~--~d~~~l~~~l~~~-~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
++.+=+-+.+.+|........|..+.+.. .+.+..=+. .+++++++.+..+ ..++.+. + |..|.+.+..++++
T Consensus 274 lle~~~i~~iEdPl~~~D~~~~~~L~~~~~~~ipI~gDE~~~t~~~~~~~~i~~~a~d~v~ik-~-~~iGGItea~~ia~ 351 (425)
T TIGR01060 274 LVEKYPIVSIEDGLSEEDWEGWAELTKELGDKVQIVGDDLFVTNTEILREGIEMGVANSILIK-P-NQIGTLTETLDAVE 351 (425)
T ss_pred HHhcCCcEEEEcCCCcccHHHHHHHHHhcCCCCeEEeCCCcccCHHHHHHHHHhCCCCEEEec-c-cccCCHHHHHHHHH
Confidence 34433456788888777777777777776 455443232 2588888888743 3444443 3 45788999999999
Q ss_pred HHHHcCCEEEE
Q 021783 85 MAHAHGALLLV 95 (307)
Q Consensus 85 ~~~~~~~~li~ 95 (307)
+|+++|+.+++
T Consensus 352 lA~~~Gi~~vv 362 (425)
T TIGR01060 352 LAKKAGYTAVI 362 (425)
T ss_pred HHHHcCCcEEE
Confidence 99999987553
No 472
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=48.06 E-value=85 Score=28.96 Aligned_cols=110 Identities=18% Similarity=0.261 Sum_probs=61.2
Q ss_pred HHHhcCCCCeEEEcCCCCcchHH---HHhhhcccC-CcEEEEecCCChHHHHhhcCCCceEEEEe-CCCC------C--c
Q 021783 7 VTHLLGTGEEIVAGDDLYGGTDR---LLSRVTPKT-GVVVKRVNTCDLDEVASAIGPWTKLVWVE-SPTN------P--R 73 (307)
Q Consensus 7 ~~~~~~~gd~Vlv~~~~~~~~~~---~~~~~~~~~-g~~~~~v~~~d~~~l~~~l~~~~~~v~~~-~~~n------~--t 73 (307)
+.++++.|-.+++-+..|..... .++.+.+.+ ++.+.-=...+.++.+.+++-...+|.+. .+.. . .
T Consensus 246 ~~~l~~ag~d~i~id~a~G~s~~~~~~i~~ik~~~~~~~v~aG~V~t~~~a~~~~~aGad~I~vg~g~Gs~~~t~~~~~~ 325 (495)
T PTZ00314 246 AAALIEAGVDVLVVDSSQGNSIYQIDMIKKLKSNYPHVDIIAGNVVTADQAKNLIDAGADGLRIGMGSGSICITQEVCAV 325 (495)
T ss_pred HHHHHHCCCCEEEEecCCCCchHHHHHHHHHHhhCCCceEEECCcCCHHHHHHHHHcCCCEEEECCcCCcccccchhccC
Confidence 34566777666665665543332 233333332 33332213347788888877666667553 2221 1 1
Q ss_pred ccc--ccHHHHHHHHHHcCCEEEEeCccCCCC-cCCccCCCccEEE
Q 021783 74 QQI--CDIRKIAEMAHAHGALLLVDNSIMSPV-LSRPLELGADIVM 116 (307)
Q Consensus 74 G~~--~~~~~l~~~~~~~~~~li~D~a~~~~~-~~~~~~~~~d~~~ 116 (307)
|.. ..+.++.++|+++++.+|.|+-...+. .......|+|.++
T Consensus 326 g~p~~~ai~~~~~~~~~~~v~vIadGGi~~~~di~kAla~GA~~Vm 371 (495)
T PTZ00314 326 GRPQASAVYHVARYARERGVPCIADGGIKNSGDICKALALGADCVM 371 (495)
T ss_pred CCChHHHHHHHHHHHhhcCCeEEecCCCCCHHHHHHHHHcCCCEEE
Confidence 111 125678888999999999998765443 2244455766554
No 473
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=47.86 E-value=1e+02 Score=27.59 Aligned_cols=85 Identities=11% Similarity=0.098 Sum_probs=56.4
Q ss_pred HhcCCCCeEEEcCCCCcchHHHHhhhcccC--CcEEEEecC--CChHHHHhhcCCC-ceEEEEeCCCCCccccccHHHHH
Q 021783 9 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIA 83 (307)
Q Consensus 9 ~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~--~d~~~l~~~l~~~-~~~v~~~~~~n~tG~~~~~~~l~ 83 (307)
.++.+=+-+.+.+|........|..+.+.. .+.+..=+. .+++++.+.+..+ ...+.+. + |..|.+.+..+++
T Consensus 272 ~l~e~~~i~~iEdPl~~~D~eg~~~L~~~~g~~ipi~gdE~~~~~~~~~~~~i~~~a~d~v~ik-~-~~iGGite~~~ia 349 (408)
T cd03313 272 ELVKKYPIVSIEDPFDEDDWEGWAKLTAKLGDKIQIVGDDLFVTNPERLKKGIEKKAANALLIK-V-NQIGTLTETIEAI 349 (408)
T ss_pred HHHHhCCcEEEEeCCCCcCHHHHHHHHHhcCCCCeEEcCCcccCCHHHHHHHHHhCCCCEEEEc-c-cccCCHHHHHHHH
Confidence 344444566788888777777777777776 344433221 2678888888743 3344433 3 3468888999999
Q ss_pred HHHHHcCCEEEE
Q 021783 84 EMAHAHGALLLV 95 (307)
Q Consensus 84 ~~~~~~~~~li~ 95 (307)
++|+++|+.+++
T Consensus 350 ~lA~~~G~~~~~ 361 (408)
T cd03313 350 KLAKKNGYGVVV 361 (408)
T ss_pred HHHHHcCCeEEc
Confidence 999999988763
No 474
>PF00117 GATase: Glutamine amidotransferase class-I; InterPro: IPR017926 Glutamine amidotransferase (GATase) enzymes catalyse the removal of the ammonia group from glutamine and then transfer this group to a substrate to form a new carbon-nitrogen group []. The GATase domain exists either as a separate polypeptidic subunit or as part of a larger polypeptide fused in different ways to a synthase domain. Two classes of GATase domains have been identified [, ]: class-I (also known as trpG-type or triad) and class-II (also known as purF-type or Ntn). Class-I (or type 1) GATase domains have been found in the following enzymes: The second component of anthranilate synthase (AS) []. AS catalyzes the biosynthesis of anthranilate from chorismate and glutamine. AS is generally a dimeric enzyme: the first component can synthesize anthranilate using ammonia rather than glutamine, whereas component II provides the GATase activity []. In some bacteria and in fungi the GATase component of AS is part of a multifunctional protein that also catalyzes other steps of the biosynthesis of tryptophan. The second component of 4-amino-4-deoxychorismate (ADC) synthase, a dimeric prokaryotic enzyme that functions in the pathway that catalyzes the biosynthesis of para-aminobenzoate (PABA) from chorismate and glutamine. The second component (gene pabA) provides the GATase activity []. CTP synthase. CTP synthase catalyzes the final reaction in the biosynthesis of pyrimidine, the ATP-dependent formation of CTP from UTP and glutamine. CTP synthase is a single chain enzyme that contains two distinct domains; the GATase domain is in the C-terminal section []. GMP synthase (glutamine-hydrolyzing). GMP synthase catalyzes the ATP-dependent formation of GMP from xanthosine 5'-phosphate and glutamine. GMP synthase is a single chain enzyme that contains two distinct domains; the GATase domain is in the N-terminal section [, ]. Glutamine-dependent carbamoyl-phosphate synthase (GD-CPSase); an enzyme involved in both arginine and pyrimidine biosynthesis and which catalyzes the ATP-dependent formation of carbamoyl phosphate from glutamine and carbon dioxide. In bacteria GD-CPSase is composed of two subunits: the large chain (gene carB) provides the CPSase activity, while the small chain (gene carA) provides the GATase activity. In yeast the enzyme involved in arginine biosynthesis is also composed of two subunits: CPA1 (GATase), and CPA2 (CPSase). In most eukaryotes, the first three steps of pyrimidine biosynthesis are catalyzed by a large multifunctional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals). The GATase domain is located at the N-terminal extremity of this polyprotein []. Phosphoribosylformylglycinamidine synthase, an enzyme that catalyzes the fourth step in the de novo biosynthesis of purines. In some species of bacteria and rchaea, FGAM synthase II is composed of two subunits: a small chain (gene purQ) which provides the GATase activity and a large chain (gene purL) which provides the aminator activity. In eukaryotes and Gram-negative bacteria a single polypeptide (large type of purL) contains a FGAM synthethase domain and the GATase as the C-terminal domain []. Imidazole glycerol phosphate synthase subunit hisH, an enzyme that catalyzes the fifth step in the biosynthesis of histidine. A triad of conserved Cys-His-Glu forms the active site, wherein the catalytic cysteine is essential for the amidotransferase activity [, ]. Different structures show that the active site Cys of type 1 GATase is located at the tip of a nucleophile elbow.; PDB: 1I7S_D 1I7Q_D 3UOW_B 1GPM_C 1O1Y_A 2VXO_A 2VPI_B 1OX5_B 1OX6_B 1OX4_B ....
Probab=47.84 E-value=97 Score=24.01 Aligned_cols=68 Identities=16% Similarity=0.150 Sum_probs=43.1
Q ss_pred cchHHHHhhhcccCCcEEEEecCCC-hHHHHhhcCCCceEEEEe-CCCCCccccccHHHHHHHHHHcCCEEE
Q 021783 25 GGTDRLLSRVTPKTGVVVKRVNTCD-LDEVASAIGPWTKLVWVE-SPTNPRQQICDIRKIAEMAHAHGALLL 94 (307)
Q Consensus 25 ~~~~~~~~~~~~~~g~~~~~v~~~d-~~~l~~~l~~~~~~v~~~-~~~n~tG~~~~~~~l~~~~~~~~~~li 94 (307)
.++...+..+++..|.++..++.++ .+...+. ..+...++++ .+.++.- .....++.+.+.+.+++++
T Consensus 7 ~~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~d~iii~Gg~~~~~d-~~~~~~~i~~~~~~~~Pil 76 (192)
T PF00117_consen 7 DSFTHSLVRALRELGIDVEVVRVDSDFEEPLED-LDDYDGIIISGGPGSPYD-IEGLIELIREARERKIPIL 76 (192)
T ss_dssp HTTHHHHHHHHHHTTEEEEEEETTGGHHHHHHH-TTTSSEEEEECESSSTTS-HHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHHCCCeEEEEECCCchhhhhhh-hcCCCEEEECCcCCcccc-ccccccccccccccceEEE
Confidence 3555666788899999888888763 2333222 3345566665 5666543 4456677777777787765
No 475
>PRK05601 DNA polymerase III subunit epsilon; Validated
Probab=47.70 E-value=23 Score=30.97 Aligned_cols=56 Identities=23% Similarity=0.215 Sum_probs=38.8
Q ss_pred CCcEEEEecCC--ChHHHHhhcC-----------CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 38 TGVVVKRVNTC--DLDEVASAIG-----------PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 38 ~g~~~~~v~~~--d~~~l~~~l~-----------~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.|.+++.-+.. |++.|.+++- ..|.+|+++.+..-+|..+ -|++.|++++.|+.+.
T Consensus 296 ~Gm~v~~~~e~~~~~d~li~~~~~agL~y~~~~~r~tslvv~n~~~~~~gk~~-------~a~~~gipl~~d~~fl 364 (377)
T PRK05601 296 AGMEVVVAPEITMDPDIIIQAIVRAGLAYSEKLTRQTSVVVCNQTRDLDGKAM-------HAQRKGIPLLSDVAFL 364 (377)
T ss_pred cCcEEEEeCCccCCHHHHHHHHHHccchhhhccccceeEEEeCCCCCccchhh-------hhhhcCCCccCHHHHH
Confidence 47777776653 7777766543 3567777666666666655 5788899999998763
No 476
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=47.57 E-value=69 Score=26.89 Aligned_cols=68 Identities=19% Similarity=0.278 Sum_probs=38.8
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC------C---ChHHHHhhcC-CCceEEEEeCCCCCccccccHHHH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------C---DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKI 82 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~------~---d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l 82 (307)
++..+++..+.| .++ ++.+|.++..+.. . ++.++.+.++ .+.++|+++.-.++ +.+
T Consensus 170 ~~~~~v~~H~af-~Y~------~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 235 (282)
T cd01017 170 KGKTFVTQHAAF-GYL------ARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASS-------KIA 235 (282)
T ss_pred CCCeEEEecccH-HHH------HHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 466788877766 333 6788988765431 1 3344444443 56777776543332 233
Q ss_pred HHHHHHcCCEEE
Q 021783 83 AEMAHAHGALLL 94 (307)
Q Consensus 83 ~~~~~~~~~~li 94 (307)
..++++.|+.++
T Consensus 236 ~~la~~~g~~v~ 247 (282)
T cd01017 236 ETLAKETGAKLL 247 (282)
T ss_pred HHHHHHcCCcEE
Confidence 446677776554
No 477
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=47.57 E-value=54 Score=26.38 Aligned_cols=34 Identities=24% Similarity=0.261 Sum_probs=27.0
Q ss_pred CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 021783 60 WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 94 (307)
Q Consensus 60 ~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li 94 (307)
.+.+++++- .|..|...+.+++.++|++||+.++
T Consensus 168 ~p~~vicEi-l~~dG~ma~~~~l~~fA~~h~l~~i 201 (218)
T PRK00910 168 QPAGVLCEL-TNPDGTMAKTPEIIAFGKLHNMPVL 201 (218)
T ss_pred CceEEEEEE-ecCCCCcCCHHHHHHHHHHcCCcEE
Confidence 345555553 5567999999999999999999886
No 478
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=47.56 E-value=86 Score=29.18 Aligned_cols=81 Identities=15% Similarity=0.087 Sum_probs=56.5
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEe-cCCChHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcC
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV-NTCDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHG 90 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~ 90 (307)
+||+|++--|.-+.....+-. +-+.|+-...+ +...+++++..+. .+.|+++........|...++++..+-+...
T Consensus 64 kGDrV~iymp~~pe~~~a~LA-~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~- 141 (528)
T COG0365 64 KGDRVAIYMPNSPEAVIALLA-TARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSS- 141 (528)
T ss_pred CCCEEEEEcCCCHHHHHHHHH-HHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcc-
Confidence 899999988877777666544 44567654433 3347888888886 5788888878888889888876665555443
Q ss_pred CEEEEe
Q 021783 91 ALLLVD 96 (307)
Q Consensus 91 ~~li~D 96 (307)
.++++
T Consensus 142 -~iv~~ 146 (528)
T COG0365 142 -VVVVP 146 (528)
T ss_pred -eEEec
Confidence 44443
No 479
>PTZ00081 enolase; Provisional
Probab=47.52 E-value=1.1e+02 Score=27.67 Aligned_cols=84 Identities=14% Similarity=0.138 Sum_probs=57.8
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCC--cEEEEecC--CChHHHHhhcCCC-ceEEEEeCCCCCccccccHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~--~d~~~l~~~l~~~-~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
++++=+-+.+.+|.....+..|..+.+..| +.+..=+. .+++.+.+.+..+ ...+.+. + |..|.+-+..++++
T Consensus 293 ~l~~y~I~~IEDPl~~~D~eg~~~Lt~~lg~~i~IvgDE~~~tn~~~l~~~I~~~aad~i~iK-v-nqiGGITe~l~~a~ 370 (439)
T PTZ00081 293 LVKKYPIVSIEDPFDQDDWEAYAKLTAAIGQKVQIVGDDLLVTNPTRIKKAIEKKACNALLLK-V-NQIGTVTEAIEAAK 370 (439)
T ss_pred HHhcCCcEEEEcCCCcccHHHHHHHHHhhCCCceEEcCCcccCCHHHHHHHHHhCCCCEEEec-c-ccccCHHHHHHHHH
Confidence 445445677888888777777878777774 44433222 3588888888743 3344443 3 34688888999999
Q ss_pred HHHHcCCEEEE
Q 021783 85 MAHAHGALLLV 95 (307)
Q Consensus 85 ~~~~~~~~li~ 95 (307)
+|+++|+.+++
T Consensus 371 lA~~~Gi~~ii 381 (439)
T PTZ00081 371 LAQKNGWGVMV 381 (439)
T ss_pred HHHHcCCcEEE
Confidence 99999988776
No 480
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=47.50 E-value=54 Score=29.86 Aligned_cols=79 Identities=15% Similarity=0.082 Sum_probs=50.5
Q ss_pred eEEEcCCCCcchHHHHhhhcccCCcEEEEecC------------CChHHHHhhcC-----CCceEEEEe-CCCCCccccc
Q 021783 16 EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------------CDLDEVASAIG-----PWTKLVWVE-SPTNPRQQIC 77 (307)
Q Consensus 16 ~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~------------~d~~~l~~~l~-----~~~~~v~~~-~~~n~tG~~~ 77 (307)
++.++...|.... ..+++.+|+..+.+.. .|...+++.++ .++-++++- -..+-.|..-
T Consensus 233 t~YiS~alh~~l~---hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnD 309 (838)
T KOG0630|consen 233 TFYISEALHMDLL---HYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQND 309 (838)
T ss_pred eEEEcccccHHHH---HHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchH
Confidence 4556666664333 3667888876555543 15566777765 344455444 3345566666
Q ss_pred cHHHHHHHHHHcC-CEEEEeC
Q 021783 78 DIRKIAEMAHAHG-ALLLVDN 97 (307)
Q Consensus 78 ~~~~l~~~~~~~~-~~li~D~ 97 (307)
.+-+|.++|++++ .|++.-+
T Consensus 310 mi~kildi~eahakfWLHasG 330 (838)
T KOG0630|consen 310 MILKILDICEAHAKFWLHASG 330 (838)
T ss_pred HHHHHHHHHHHhhheeEeecc
Confidence 7999999999997 8887654
No 481
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=47.15 E-value=55 Score=26.27 Aligned_cols=35 Identities=23% Similarity=0.195 Sum_probs=27.5
Q ss_pred CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 60 WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 60 ~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
.+.+++++- .|..|...+.+++.++|++||+.++.
T Consensus 167 ~p~~vicEi-l~~dG~ma~~~~~~~fA~~~~l~~is 201 (214)
T PRK01792 167 KEAGVICEI-TNDDGTMARTPEIVEFAKKFGYAVVT 201 (214)
T ss_pred CceEEEEEE-ecCCCCccCHHHHHHHHHHcCCcEEE
Confidence 345555554 45679999999999999999998863
No 482
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=47.11 E-value=49 Score=28.50 Aligned_cols=93 Identities=17% Similarity=0.252 Sum_probs=63.4
Q ss_pred hcCCCCeEEEcCC-CCcch-HHHHhhhcccCCcEEEEec-CCCh-----HHHHhhcCCCceEEEEeCC---CCCcccccc
Q 021783 10 LLGTGEEIVAGDD-LYGGT-DRLLSRVTPKTGVVVKRVN-TCDL-----DEVASAIGPWTKLVWVESP---TNPRQQICD 78 (307)
Q Consensus 10 ~~~~gd~Vlv~~~-~~~~~-~~~~~~~~~~~g~~~~~v~-~~d~-----~~l~~~l~~~~~~v~~~~~---~n~tG~~~~ 78 (307)
+.+.|-+|++-.. +|-+- ...++.+.++.|++++.-+ .-|+ +.++.+...+..+++++.. +|-+.-+-.
T Consensus 163 l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~~DvvliDTAGRLhnk~nLM~E 242 (340)
T COG0552 163 LKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARGIDVVLIDTAGRLHNKKNLMDE 242 (340)
T ss_pred HHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcCCCEEEEeCcccccCchhHHHH
Confidence 4566777765443 44332 3447778888999987744 2355 4566666688889998853 665555567
Q ss_pred HHHHHHHHHHcC------CEEEEeCccCCC
Q 021783 79 IRKIAEMAHAHG------ALLLVDNSIMSP 102 (307)
Q Consensus 79 ~~~l~~~~~~~~------~~li~D~a~~~~ 102 (307)
+++|.+++++.. ++++.|+.-+.-
T Consensus 243 L~KI~rV~~k~~~~ap~e~llvlDAttGqn 272 (340)
T COG0552 243 LKKIVRVIKKDDPDAPHEILLVLDATTGQN 272 (340)
T ss_pred HHHHHHHhccccCCCCceEEEEEEcccChh
Confidence 999999998875 677779987643
No 483
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=47.10 E-value=1.1e+02 Score=22.48 Aligned_cols=71 Identities=14% Similarity=0.111 Sum_probs=47.7
Q ss_pred CCcchHHHHhhhcccCCcEEEEecCC-ChHHH-HhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcC---CEEEE
Q 021783 23 LYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEV-ASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG---ALLLV 95 (307)
Q Consensus 23 ~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l-~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~---~~li~ 95 (307)
.|..-.+....+++..|.+++....+ +++++ +.+...+..+|.+++.. +.....++++.+..++.+ +.+++
T Consensus 14 ~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~--~~~~~~~~~~~~~L~~~g~~~i~viv 89 (132)
T TIGR00640 14 GHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLA--GGHLTLVPALRKELDKLGRPDILVVV 89 (132)
T ss_pred ccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCch--hhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 44444455667788899999887764 56665 44555778888887544 334445888888888864 45555
No 484
>PLN02654 acetate-CoA ligase
Probab=46.57 E-value=1.1e+02 Score=29.25 Aligned_cols=75 Identities=13% Similarity=0.097 Sum_probs=51.3
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-ChHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
-+++||+|.+.-|..+.....+- ++...|+..+.++.. ..+++...+. .++++++++......|...++.++.+-
T Consensus 141 Gv~~GdrV~i~~pn~~e~v~a~l-A~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~ 217 (666)
T PLN02654 141 GVKKGDAVVIYLPMLMELPIAML-ACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDA 217 (666)
T ss_pred CCCCCCEEEEEcCCCHHHHHHHH-HHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHH
Confidence 37899999988887766655443 356788888877654 6778888876 577888876544445666665554443
No 485
>PF00994 MoCF_biosynth: Probable molybdopterin binding domain; InterPro: IPR001453 Eukaryotic and prokaryotic molybdoenzymes require a molybdopterin cofactor (MoCF) for their activity. The biosynthesis of this cofactor involves a complex multistep enzymatic pathway. One of the eukaryotic proteins involved in this pathway is the Drosophila protein cinnamon [] which is highly similar to gephyrin, a rat microtubule-associated protein which was thought to anchor the glycine receptor to subsynaptic microtubules. Cinnamon and gephyrin are evolutionary related, in their N-terminal half, to the Escherichia coli MoCF biosynthesis proteins mog/chlG and moaB/chlA2 and, in their C-terminal half, to E. coli moeA/chlE.; GO: 0006777 Mo-molybdopterin cofactor biosynthetic process; PDB: 3TCR_B 1O8O_B 1O8Q_G 1EAV_D 1O8N_C 1UUX_A 1UUY_A 2G2C_A 2G4R_C 3K6A_F ....
Probab=46.29 E-value=17 Score=26.97 Aligned_cols=59 Identities=22% Similarity=0.355 Sum_probs=38.5
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcC---CCceEEEEeCCCCCc
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIG---PWTKLVWVESPTNPR 73 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~---~~~~~v~~~~~~n~t 73 (307)
||+++ ..-.+.++...+...++..|+++..... +|.+++.+.+. .+..+|+++.-..++
T Consensus 6 GdEl~-~g~~~d~n~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~D~VittGG~g~~ 69 (144)
T PF00994_consen 6 GDELL-SGQIRDSNGPFLAALLEELGIEVIRYGIVPDDPDAIKEALRRALDRADLVITTGGTGPG 69 (144)
T ss_dssp CHHHH-TTSSEBHHHHHHHHHHHHTTEEEEEEEEEESSHHHHHHHHHHHHHTTSEEEEESSSSSS
T ss_pred CccCc-CCceEEhHHHHHHHHHHHcCCeeeEEEEECCCHHHHHHHHHhhhccCCEEEEcCCcCcc
Confidence 44444 2333445555667888889998876554 68888888875 345788877655543
No 486
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=45.44 E-value=1.3e+02 Score=22.77 Aligned_cols=78 Identities=23% Similarity=0.250 Sum_probs=48.3
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHH
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
.++..+++.|-+|....-.-.... . ..+++++..+..|++.+.+++..-. .|+.+.+.++. .....+.+.+
T Consensus 13 ~l~~~L~~~~~~V~~~~R~~~~~~----~---~~~~~~~~~d~~d~~~~~~al~~~d-~vi~~~~~~~~-~~~~~~~~~~ 83 (183)
T PF13460_consen 13 ALAKQLLRRGHEVTALVRSPSKAE----D---SPGVEIIQGDLFDPDSVKAALKGAD-AVIHAAGPPPK-DVDAAKNIIE 83 (183)
T ss_dssp HHHHHHHHTTSEEEEEESSGGGHH----H---CTTEEEEESCTTCHHHHHHHHTTSS-EEEECCHSTTT-HHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEecCchhcc----c---ccccccceeeehhhhhhhhhhhhcc-hhhhhhhhhcc-cccccccccc
Confidence 344556677766654333322222 2 6789999989899999999998543 44443222221 2334778888
Q ss_pred HHHHcCC
Q 021783 85 MAHAHGA 91 (307)
Q Consensus 85 ~~~~~~~ 91 (307)
.+++.++
T Consensus 84 a~~~~~~ 90 (183)
T PF13460_consen 84 AAKKAGV 90 (183)
T ss_dssp HHHHTTS
T ss_pred ccccccc
Confidence 8888765
No 487
>TIGR02238 recomb_DMC1 meiotic recombinase Dmc1. This model describes DMC1, a subfamily of a larger family of DNA repair and recombination proteins. It is eukaryotic only and most closely related to eukaryotic RAD51. It also resembles archaeal RadA (TIGR02236) and RadB (TIGR02237) and bacterial RecA (TIGR02012). It has been characterized for human as a recombinase active only in meiosis.
Probab=45.37 E-value=1.2e+02 Score=25.95 Aligned_cols=16 Identities=6% Similarity=0.347 Sum_probs=10.0
Q ss_pred HHHHHHHHHcCCEEEE
Q 021783 80 RKIAEMAHAHGALLLV 95 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~ 95 (307)
..|..+++++|+.+++
T Consensus 226 ~~L~~la~~~~vavvi 241 (313)
T TIGR02238 226 SRLNKISEEFNVAVFV 241 (313)
T ss_pred HHHHHHHHHcCcEEEE
Confidence 3466677777765554
No 488
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=45.33 E-value=1.1e+02 Score=21.79 Aligned_cols=78 Identities=15% Similarity=0.086 Sum_probs=42.3
Q ss_pred CCeEEEcCCCCcc-hHHHHhhhcccCCcEEEEecCCC-hHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCC
Q 021783 14 GEEIVAGDDLYGG-TDRLLSRVTPKTGVVVKRVNTCD-LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGA 91 (307)
Q Consensus 14 gd~Vlv~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~d-~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~ 91 (307)
.++|++....+.. ....+.......|..+..++..+ .......++++..+|+++. +|...++.++++.++++|+
T Consensus 13 ~~~i~i~g~g~s~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iS~----~g~~~~~~~~~~~a~~~g~ 88 (139)
T cd05013 13 ARRIYIFGVGSSGLVAEYLAYKLLRLGKPVVLLSDPHLQLMSAANLTPGDVVIAISF----SGETKETVEAAEIAKERGA 88 (139)
T ss_pred CCEEEEEEcCchHHHHHHHHHHHHHcCCceEEecCHHHHHHHHHcCCCCCEEEEEeC----CCCCHHHHHHHHHHHHcCC
Confidence 3556655544422 22223444556676666554321 1222223456666666543 4555678888899999986
Q ss_pred EEEE
Q 021783 92 LLLV 95 (307)
Q Consensus 92 ~li~ 95 (307)
.++.
T Consensus 89 ~iv~ 92 (139)
T cd05013 89 KVIA 92 (139)
T ss_pred eEEE
Confidence 6553
No 489
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=45.27 E-value=52 Score=23.36 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=24.2
Q ss_pred cCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 021783 57 IGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 94 (307)
Q Consensus 57 l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li 94 (307)
++++.-+|+++ .+|...++-+.++.++++|+.+|
T Consensus 44 ~~~~d~~I~iS----~sG~t~e~~~~~~~a~~~g~~vi 77 (126)
T cd05008 44 LDEDTLVIAIS----QSGETADTLAALRLAKEKGAKTV 77 (126)
T ss_pred CCCCcEEEEEe----CCcCCHHHHHHHHHHHHcCCeEE
Confidence 34555555553 25777789999999999987665
No 490
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=45.03 E-value=1.3e+02 Score=24.93 Aligned_cols=39 Identities=15% Similarity=0.126 Sum_probs=19.5
Q ss_pred hhcccCCcEEEEecCCChHHHHhhc---C-CCceEEEEeCCCC
Q 021783 33 RVTPKTGVVVKRVNTCDLDEVASAI---G-PWTKLVWVESPTN 71 (307)
Q Consensus 33 ~~~~~~g~~~~~v~~~d~~~l~~~l---~-~~~~~v~~~~~~n 71 (307)
..+...|+.=+.+|-..+++.++.. + .....|.+++|+.
T Consensus 111 ~~~~~aGvdGviipDLp~ee~~~~~~~~~~~gl~~I~lvap~t 153 (258)
T PRK13111 111 ADAAEAGVDGLIIPDLPPEEAEELRAAAKKHGLDLIFLVAPTT 153 (258)
T ss_pred HHHHHcCCcEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCC
Confidence 3455566665555543334333332 2 3455666666655
No 491
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=44.97 E-value=25 Score=28.97 Aligned_cols=27 Identities=19% Similarity=0.254 Sum_probs=23.4
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
|..-+.+++.++++++++-.|+|++|-
T Consensus 50 G~lg~~~~l~~~l~~~~i~~vIDATHP 76 (249)
T PF02571_consen 50 GRLGDEEGLAEFLRENGIDAVIDATHP 76 (249)
T ss_pred CCCCCHHHHHHHHHhCCCcEEEECCCc
Confidence 444488999999999999999999984
No 492
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=44.68 E-value=93 Score=25.86 Aligned_cols=69 Identities=13% Similarity=0.212 Sum_probs=36.4
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
++..+++..+.| . .+++.+|.++..+... ++.++.+.++ .+.++|+.+.-.++ +.+..
T Consensus 169 ~~~~~v~~H~af-~------Y~~~~ygl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ 234 (266)
T cd01018 169 KQRAFMVYHPAW-G------YFARDYGLTQIPIEEEGKEPSPADLKRLIDLAKEKGVRVVFVQPQFST-------KSAEA 234 (266)
T ss_pred CCCeEEEECchh-H------HHHHHcCCEEEecCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCc-------HHHHH
Confidence 455677766665 3 3468889887654211 2334444443 45666665532221 22335
Q ss_pred HHHHcCCEEEE
Q 021783 85 MAHAHGALLLV 95 (307)
Q Consensus 85 ~~~~~~~~li~ 95 (307)
++++.|+.++.
T Consensus 235 la~~~g~~v~~ 245 (266)
T cd01018 235 IAREIGAKVVT 245 (266)
T ss_pred HHHHcCCeEEE
Confidence 66666665543
No 493
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=44.66 E-value=63 Score=23.77 Aligned_cols=54 Identities=24% Similarity=0.293 Sum_probs=37.1
Q ss_pred CChHHHHhhcC-CCceEEEEeCCCCCcccccc----HHHHHHHHH-Hc-CCEEE-EeCccCC
Q 021783 48 CDLDEVASAIG-PWTKLVWVESPTNPRQQICD----IRKIAEMAH-AH-GALLL-VDNSIMS 101 (307)
Q Consensus 48 ~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~-~~-~~~li-~D~a~~~ 101 (307)
.+.+.|.+.+. .++..+++-.|-|..|..-+ ..++++..+ +. ++.|+ +||-+++
T Consensus 38 ~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 38 KDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred hHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 37788888876 57888888888888888765 344443333 33 77666 9998863
No 494
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=44.56 E-value=17 Score=28.11 Aligned_cols=49 Identities=16% Similarity=0.243 Sum_probs=35.0
Q ss_pred ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCC--EEEEeCccCCC
Q 021783 49 DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGA--LLLVDNSIMSP 102 (307)
Q Consensus 49 d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~--~li~D~a~~~~ 102 (307)
+.++++++++.+...+++- +|.+.+++++.+.++++|- ++++|=..+.+
T Consensus 8 ~~~~l~~al~s~~~~vfLl-----~g~I~~l~~~v~~~~~~gK~vfVHiDli~Gl~ 58 (175)
T PF04309_consen 8 DEEDLEKALESDVEVVFLL-----TGDIGNLKDIVKRLKAAGKKVFVHIDLIEGLS 58 (175)
T ss_dssp CCCCCCCCCCSSSSEEEE------SEECCCHHHHHHHHHHTT-EEEEECCGEETB-
T ss_pred CHHHHHHHHcCCCCEEEEE-----cCcHHHHHHHHHHHHHcCCEEEEEehhcCCCC
Confidence 5677788888777777763 5888999999999999984 45555554433
No 495
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=43.58 E-value=1e+02 Score=23.04 Aligned_cols=96 Identities=17% Similarity=0.286 Sum_probs=48.6
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCC-----------hHHHHhhcCCCceEEEEe--CCCCCccccc
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCD-----------LDEVASAIGPWTKLVWVE--SPTNPRQQIC 77 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d-----------~~~l~~~l~~~~~~v~~~--~~~n~tG~~~ 77 (307)
..+|++|.+--+ +.+.. ..++..+.++..++.+. .++-++.+ ++..+++++ +.-|.
T Consensus 8 ~~~~~~V~~VG~-f~P~~----~~l~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~l-~~aD~viiTGsTlvN~----- 76 (147)
T PF04016_consen 8 IGPGDKVGMVGY-FQPLV----EKLKERGAEVRVFDLNPDNIGEEPGDVPDEDAEEIL-PWADVVIITGSTLVNG----- 76 (147)
T ss_dssp TTTTSEEEEES---HCCH----HHHCCCCSEEEEEESSGGG--SSCT-EEGGGHHHHG-GG-SEEEEECHHCCTT-----
T ss_pred hcCCCEEEEEcC-cHHHH----HHHhcCCCCEEEEECCCCCCCCCCCcCCHHHHHHHH-ccCCEEEEEeeeeecC-----
Confidence 467888876543 22344 33445677887777641 12333333 344566664 22221
Q ss_pred cHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEecc
Q 021783 78 DIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSA 119 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~ 119 (307)
.+++|.+.|++ +..++.=+..+ +..+ .....|++.+.++.
T Consensus 77 Ti~~iL~~~~~-~~~vil~GpS~-~~~P~~l~~~Gv~~v~g~~ 117 (147)
T PF04016_consen 77 TIDDILELARN-AREVILYGPSA-PLHPEALFDYGVTYVGGSR 117 (147)
T ss_dssp THHHHHHHTTT-SSEEEEESCCG-GS-GGGGCCTT-SEEEEEE
T ss_pred CHHHHHHhCcc-CCeEEEEecCc-hhhHHHHHhCCCCEEEEEE
Confidence 58899999994 44555433222 2333 34455666555443
No 496
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=43.43 E-value=95 Score=28.18 Aligned_cols=63 Identities=17% Similarity=-0.018 Sum_probs=38.3
Q ss_pred CCcEEEEecCC-ChHHHHhhcCCCceEEEE-eCCCCCcccc--ccHHHHHHHHHHcCCEEEEeCccC
Q 021783 38 TGVVVKRVNTC-DLDEVASAIGPWTKLVWV-ESPTNPRQQI--CDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 38 ~g~~~~~v~~~-d~~~l~~~l~~~~~~v~~-~~~~n~tG~~--~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.+.-++.+|.. -++.+++.....++.+++ ++....+|.- ..-+++.++|+++|+.++=-++.+
T Consensus 65 ~Dlavi~vp~~~~~~~l~e~~~~gv~~~vi~s~gf~e~g~~g~~~~~~l~~~a~~~girvlGPnc~G 131 (447)
T TIGR02717 65 VDLAVIVVPAKYVPQVVEECGEKGVKGAVVITAGFKEVGEEGAELEQELVEIARKYGMRLLGPNCLG 131 (447)
T ss_pred CCEEEEecCHHHHHHHHHHHHhcCCCEEEEECCCccccCcchHHHHHHHHHHHHHcCCEEEecCeee
Confidence 34444444543 345566666666666654 3333334421 124789999999999999877754
No 497
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=43.34 E-value=88 Score=26.68 Aligned_cols=81 Identities=14% Similarity=0.070 Sum_probs=47.4
Q ss_pred cCCC---CeEEEcCCCCcchHHHHhhhccc--CCcEEEEecCC-ChHHHHhhcCCCceEEEEe-CCCCCccccccHHHHH
Q 021783 11 LGTG---EEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTC-DLDEVASAIGPWTKLVWVE-SPTNPRQQICDIRKIA 83 (307)
Q Consensus 11 ~~~g---d~Vlv~~~~~~~~~~~~~~~~~~--~g~~~~~v~~~-d~~~l~~~l~~~~~~v~~~-~~~n~tG~~~~~~~l~ 83 (307)
++|+ ++| .--|+|++.. .+-.. .+.-+..+|.. -++.+++......+.+++. .-...+| -.+.+.
T Consensus 43 V~p~~~~~~i-~G~~~y~sv~----dlp~~~~~DlAvI~vPa~~v~~al~e~~~~Gvk~~vIisaGf~e~g---~~~~~~ 114 (300)
T PLN00125 43 VTPKKGGTEH-LGLPVFNTVA----EAKAETKANASVIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHD---MVRVKA 114 (300)
T ss_pred ECCCCCCceE-cCeeccCCHH----HHhhccCCCEEEEecCHHHHHHHHHHHHHcCCCEEEEECCCCCccc---HHHHHH
Confidence 4555 454 3566777666 33332 35556666653 3566777777777766554 3333444 245566
Q ss_pred HHHHHcCCEEEEeCcc
Q 021783 84 EMAHAHGALLLVDNSI 99 (307)
Q Consensus 84 ~~~~~~~~~li~D~a~ 99 (307)
++++++|+.++==++.
T Consensus 115 ~~ar~~girviGPNc~ 130 (300)
T PLN00125 115 ALNRQSKTRLIGPNCP 130 (300)
T ss_pred HHHhhcCCEEECCCCc
Confidence 6799999988754443
No 498
>cd00983 recA RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange.
Probab=43.26 E-value=26 Score=30.15 Aligned_cols=24 Identities=13% Similarity=0.183 Sum_probs=13.7
Q ss_pred CHHHHHHHHhcCCcceeecCCCCc
Q 021783 229 SLALSKHVVETTKYFSITVSFGSV 252 (307)
Q Consensus 229 ~~~~~~~~~~~l~~~gi~v~~g~~ 252 (307)
+.+....+++..-+.|+....|+-
T Consensus 263 Gi~~~~~~~~~a~~~g~i~k~g~w 286 (325)
T cd00983 263 GISREGEIIDLAVELGIIKKSGSW 286 (325)
T ss_pred ccchhhhHHHHHHhCCcEEcCCCE
Confidence 444455666665556666555543
No 499
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=43.21 E-value=1.1e+02 Score=26.97 Aligned_cols=70 Identities=14% Similarity=0.061 Sum_probs=45.8
Q ss_pred hhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCC--CCccccccHHHHHHHHHHcCCEEEEeCccCCC
Q 021783 33 RVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT--NPRQQICDIRKIAEMAHAHGALLLVDNSIMSP 102 (307)
Q Consensus 33 ~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~--n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~ 102 (307)
.+.+..+.+++.-...+.++.++++.-....|.+++.. +-.+...+++.|.++++..++.|+.|+-...|
T Consensus 230 ~ir~~~~~pviiKgV~~~eda~~a~~~G~d~I~VSnhGGrqld~~~~~~~~L~ei~~~~~~~vi~dGGIr~g 301 (361)
T cd04736 230 WLRDLWPHKLLVKGIVTAEDAKRCIELGADGVILSNHGGRQLDDAIAPIEALAEIVAATYKPVLIDSGIRRG 301 (361)
T ss_pred HHHHhCCCCEEEecCCCHHHHHHHHHCCcCEEEECCCCcCCCcCCccHHHHHHHHHHHhCCeEEEeCCCCCH
Confidence 33444555554444458888888888778888876321 12222234888888888889999999865544
No 500
>PRK06512 thiamine-phosphate pyrophosphorylase; Provisional
Probab=42.58 E-value=61 Score=26.17 Aligned_cols=49 Identities=12% Similarity=0.071 Sum_probs=34.1
Q ss_pred hHHHHhhcCCC-ceEEEEeCCCCCcccccc-HHHHHHHHHHcCCEEEEeCc
Q 021783 50 LDEVASAIGPW-TKLVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDNS 98 (307)
Q Consensus 50 ~~~l~~~l~~~-~~~v~~~~~~n~tG~~~~-~~~l~~~~~~~~~~li~D~a 98 (307)
++.+++.+... .++|.+-..+.+.-.... .+++.++|+++|+.+++++-
T Consensus 29 ~~~l~~al~~G~v~~vQlR~K~l~~~~~~~~a~~l~~l~~~~gv~liINd~ 79 (221)
T PRK06512 29 AKLLRAALQGGDVASVILPQYGLDEATFQKQAEKLVPVIQEAGAAALIAGD 79 (221)
T ss_pred HHHHHHHHcCCCccEEEEeCCCCCHHHHHHHHHHHHHHHHHhCCEEEEeCH
Confidence 45677777776 577776544443333332 67899999999999998764
Done!