Query 021783
Match_columns 307
No_of_seqs 154 out of 2165
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 09:14:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021783.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021783hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ndn_A O-succinylhomoserine su 100.0 5.4E-44 1.8E-48 314.5 32.2 302 2-303 107-414 (414)
2 3ri6_A O-acetylhomoserine sulf 100.0 5.2E-44 1.8E-48 315.3 30.6 301 2-303 108-430 (430)
3 3nmy_A Xometc, cystathionine g 100.0 5.1E-43 1.7E-47 307.0 32.5 303 1-303 92-397 (400)
4 1qgn_A Protein (cystathionine 100.0 4.3E-42 1.5E-46 304.0 34.1 303 2-305 140-445 (445)
5 3qhx_A Cystathionine gamma-syn 100.0 2E-41 6.9E-46 296.9 34.8 299 2-303 92-392 (392)
6 1ibj_A CBL, cystathionine beta 100.0 1.9E-41 6.4E-46 302.0 34.0 306 2-307 159-464 (464)
7 3cog_A Cystathionine gamma-lya 100.0 4.8E-41 1.6E-45 295.3 35.2 303 2-304 93-397 (403)
8 2fq6_A Cystathionine beta-lyas 100.0 3E-41 1E-45 296.8 32.1 299 2-305 108-414 (415)
9 3acz_A Methionine gamma-lyase; 100.0 8.9E-40 3E-44 286.3 35.2 304 2-305 85-389 (389)
10 1e5e_A MGL, methionine gamma-l 100.0 2.7E-39 9.3E-44 284.5 32.3 301 3-304 89-394 (404)
11 1n8p_A Cystathionine gamma-lya 100.0 1.3E-39 4.6E-44 285.3 29.1 301 2-305 81-391 (393)
12 1gc0_A Methionine gamma-lyase; 100.0 3.8E-39 1.3E-43 283.3 31.9 303 3-305 92-397 (398)
13 2rfv_A Methionine gamma-lyase; 100.0 2.9E-38 1E-42 277.7 34.0 302 3-305 91-396 (398)
14 2ctz_A O-acetyl-L-homoserine s 100.0 2.8E-37 9.5E-42 273.1 33.9 302 2-303 84-421 (421)
15 1cs1_A CGS, protein (cystathio 100.0 1E-36 3.5E-41 266.9 32.1 301 3-305 79-383 (386)
16 2cb1_A O-acetyl homoserine sul 100.0 9.6E-36 3.3E-40 262.7 35.9 300 3-304 83-411 (412)
17 1pff_A Methionine gamma-lyase; 100.0 9.4E-37 3.2E-41 261.7 27.8 299 3-305 25-330 (331)
18 3op7_A Aminotransferase class 100.0 2.6E-29 8.9E-34 218.9 17.7 257 3-305 93-371 (375)
19 1b5p_A Protein (aspartate amin 100.0 2.8E-28 9.5E-33 213.2 20.6 239 3-288 103-366 (385)
20 2z61_A Probable aspartate amin 100.0 4.7E-28 1.6E-32 210.7 20.6 252 3-303 101-369 (370)
21 3dzz_A Putative pyridoxal 5'-p 100.0 9.3E-28 3.2E-32 210.2 22.2 260 3-305 97-389 (391)
22 3ffh_A Histidinol-phosphate am 100.0 2.7E-28 9.3E-33 211.6 18.0 248 3-301 96-362 (363)
23 3tqx_A 2-amino-3-ketobutyrate 100.0 1.4E-27 4.9E-32 209.5 22.3 255 5-306 118-397 (399)
24 3get_A Histidinol-phosphate am 100.0 1.4E-28 4.9E-33 213.5 15.7 248 3-302 94-364 (365)
25 3nra_A Aspartate aminotransfer 100.0 6.1E-28 2.1E-32 212.5 19.4 259 3-305 114-405 (407)
26 2r2n_A Kynurenine/alpha-aminoa 100.0 2.1E-27 7.1E-32 210.4 22.7 261 3-304 120-423 (425)
27 1o4s_A Aspartate aminotransfer 100.0 1.4E-27 4.7E-32 209.1 20.8 252 3-303 113-387 (389)
28 2dr1_A PH1308 protein, 386AA l 100.0 3.1E-27 1E-31 206.5 22.7 259 3-304 83-378 (386)
29 4hvk_A Probable cysteine desul 100.0 1.2E-28 4.1E-33 214.9 13.7 272 5-304 75-372 (382)
30 3zrp_A Serine-pyruvate aminotr 100.0 2.6E-28 8.8E-33 213.1 15.7 259 3-304 66-362 (384)
31 1gd9_A Aspartate aminotransfer 100.0 1.1E-27 3.7E-32 209.7 19.3 260 3-307 99-388 (389)
32 3kax_A Aminotransferase, class 100.0 3.9E-27 1.3E-31 205.7 22.7 257 3-302 94-382 (383)
33 1fc4_A 2-amino-3-ketobutyrate 100.0 2.9E-27 9.9E-32 207.8 21.6 255 5-306 120-398 (401)
34 3ele_A Amino transferase; RER0 100.0 4.9E-27 1.7E-31 206.1 23.0 255 3-305 111-396 (398)
35 3ly1_A Putative histidinol-pho 100.0 7.5E-28 2.6E-32 208.1 17.4 250 3-305 80-352 (354)
36 1elu_A L-cysteine/L-cystine C- 100.0 1.7E-27 5.7E-32 208.4 19.8 259 3-305 88-388 (390)
37 1c7n_A Cystalysin; transferase 100.0 3.7E-27 1.3E-31 207.0 22.1 258 3-304 101-392 (399)
38 3isl_A Purine catabolism prote 100.0 3.2E-28 1.1E-32 214.9 15.2 261 3-306 74-391 (416)
39 4dq6_A Putative pyridoxal phos 100.0 2.2E-27 7.6E-32 207.7 20.5 256 3-302 102-390 (391)
40 3euc_A Histidinol-phosphate am 100.0 4.4E-28 1.5E-32 210.6 15.5 250 3-303 97-366 (367)
41 1j32_A Aspartate aminotransfer 100.0 2.3E-27 7.8E-32 207.6 19.8 256 3-304 102-386 (388)
42 3a2b_A Serine palmitoyltransfe 100.0 5.1E-27 1.8E-31 206.1 21.6 254 5-306 118-393 (398)
43 3vax_A Putative uncharacterize 100.0 1.9E-28 6.6E-33 215.2 12.5 272 3-304 92-399 (400)
44 3aow_A Putative uncharacterize 100.0 4.5E-27 1.6E-31 209.3 21.3 259 3-304 152-444 (448)
45 1fg7_A Histidinol phosphate am 100.0 6.2E-27 2.1E-31 202.6 21.5 247 3-305 87-354 (356)
46 3fdb_A Beta C-S lyase, putativ 100.0 2.6E-28 9E-33 212.7 13.0 260 3-305 93-376 (377)
47 2dou_A Probable N-succinyldiam 100.0 1.6E-27 5.6E-32 207.7 17.0 253 3-301 99-374 (376)
48 3dyd_A Tyrosine aminotransfera 100.0 8E-27 2.7E-31 206.7 21.5 256 3-304 130-423 (427)
49 3lvm_A Cysteine desulfurase; s 100.0 3E-27 1E-31 209.1 18.5 264 12-304 111-398 (423)
50 3nnk_A Ureidoglycine-glyoxylat 100.0 3.2E-28 1.1E-32 214.5 11.6 260 3-305 76-390 (411)
51 2o1b_A Aminotransferase, class 100.0 3.4E-27 1.1E-31 207.7 18.0 258 3-305 121-403 (404)
52 1d2f_A MALY protein; aminotran 100.0 1.2E-26 4.2E-31 203.1 21.5 257 3-304 99-388 (390)
53 1lc5_A COBD, L-threonine-O-3-p 100.0 8.5E-27 2.9E-31 202.3 20.2 253 3-305 88-360 (364)
54 1kmj_A Selenocysteine lyase; p 100.0 1.1E-26 3.9E-31 204.1 21.0 266 3-304 97-404 (406)
55 1xi9_A Putative transaminase; 100.0 3.4E-27 1.2E-31 207.8 17.6 259 3-305 113-403 (406)
56 3jtx_A Aminotransferase; NP_28 99.9 9E-27 3.1E-31 204.3 20.2 259 3-302 103-395 (396)
57 2x5d_A Probable aminotransfera 99.9 7.4E-27 2.5E-31 206.0 19.7 258 3-305 111-398 (412)
58 3h14_A Aminotransferase, class 99.9 9.7E-27 3.3E-31 203.8 20.1 256 3-304 103-381 (391)
59 1yiz_A Kynurenine aminotransfe 99.9 2.1E-26 7.3E-31 204.1 22.4 262 3-304 113-428 (429)
60 3g0t_A Putative aminotransfera 99.9 6.3E-27 2.2E-31 207.9 19.0 264 3-304 117-436 (437)
61 3fvs_A Kynurenine--oxoglutarat 99.9 1.6E-26 5.5E-31 204.4 21.3 262 3-304 103-421 (422)
62 2w8t_A SPT, serine palmitoyltr 99.9 1.8E-26 6.1E-31 204.5 21.5 254 5-304 139-414 (427)
63 3cai_A Possible aminotransfera 99.9 8.3E-27 2.8E-31 205.2 19.3 258 11-305 110-405 (406)
64 3i16_A Aluminum resistance pro 99.9 2E-26 6.7E-31 202.3 21.1 228 3-245 103-357 (427)
65 4eb5_A Probable cysteine desul 99.9 3.2E-27 1.1E-31 206.0 16.1 272 5-304 75-372 (382)
66 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 9E-28 3.1E-32 208.8 12.4 260 3-305 81-370 (371)
67 1eg5_A Aminotransferase; PLP-d 99.9 1.3E-27 4.3E-32 208.7 13.4 273 5-305 76-376 (384)
68 2gb3_A Aspartate aminotransfer 99.9 2.3E-26 7.9E-31 202.6 21.6 259 3-304 114-401 (409)
69 1bs0_A Protein (8-amino-7-oxon 99.9 2.5E-26 8.7E-31 200.7 21.6 252 5-304 114-382 (384)
70 1t3i_A Probable cysteine desul 99.9 2.8E-26 9.7E-31 202.5 22.0 270 3-305 102-413 (420)
71 1v2d_A Glutamine aminotransfer 99.9 2.5E-26 8.6E-31 200.5 21.2 255 3-304 90-370 (381)
72 2z9v_A Aspartate aminotransfer 99.9 2.1E-27 7.3E-32 208.0 14.3 260 5-306 74-372 (392)
73 2bkw_A Alanine-glyoxylate amin 99.9 2.2E-26 7.4E-31 201.0 20.4 260 3-305 71-384 (385)
74 3ftb_A Histidinol-phosphate am 99.9 5.5E-26 1.9E-30 196.8 22.6 243 15-304 99-360 (361)
75 2o0r_A RV0858C (N-succinyldiam 99.9 2.2E-26 7.4E-31 203.0 20.0 266 3-303 98-394 (411)
76 3jzl_A Putative cystathionine 99.9 9.4E-26 3.2E-30 197.4 23.2 228 3-245 89-340 (409)
77 1bw0_A TAT, protein (tyrosine 99.9 5.3E-26 1.8E-30 200.7 21.5 256 3-304 116-412 (416)
78 1iay_A ACC synthase 2, 1-amino 99.9 1.6E-25 5.5E-30 198.4 24.3 258 3-305 120-427 (428)
79 1vp4_A Aminotransferase, putat 99.9 1.2E-26 4E-31 205.5 16.9 262 3-304 121-417 (425)
80 3ezs_A Aminotransferase ASPB; 99.9 2.4E-26 8.3E-31 200.2 18.4 252 3-304 94-374 (376)
81 3kgw_A Alanine-glyoxylate amin 99.9 1.1E-26 3.6E-31 203.4 15.9 261 3-305 86-388 (393)
82 3cq5_A Histidinol-phosphate am 99.9 1.7E-26 5.8E-31 200.8 17.1 247 3-304 104-367 (369)
83 1u08_A Hypothetical aminotrans 99.9 4.9E-26 1.7E-30 199.0 20.1 256 3-303 103-384 (386)
84 2zc0_A Alanine glyoxylate tran 99.9 4.3E-26 1.5E-30 200.7 19.7 259 3-304 110-403 (407)
85 3hvy_A Cystathionine beta-lyas 99.9 1.5E-25 5.2E-30 196.7 22.9 228 3-245 104-357 (427)
86 3l8a_A METC, putative aminotra 99.9 2.1E-26 7E-31 203.7 17.2 258 3-303 131-420 (421)
87 3hdo_A Histidinol-phosphate am 99.9 1.5E-26 5E-31 200.5 15.5 250 3-303 94-353 (360)
88 2zyj_A Alpha-aminodipate amino 99.9 2.4E-26 8.2E-31 201.7 17.0 259 3-304 103-392 (397)
89 3tcm_A Alanine aminotransferas 99.9 1.1E-25 3.9E-30 202.9 21.8 259 3-304 169-493 (500)
90 3piu_A 1-aminocyclopropane-1-c 99.9 1.5E-25 5.2E-30 199.0 21.8 257 3-305 123-432 (435)
91 2x5f_A Aspartate_tyrosine_phen 99.9 8E-26 2.7E-30 200.5 19.8 254 3-305 125-429 (430)
92 3kki_A CAI-1 autoinducer synth 99.9 8.1E-26 2.8E-30 199.2 19.6 253 5-305 134-404 (409)
93 3p1t_A Putative histidinol-pho 99.9 4.2E-26 1.4E-30 195.7 17.3 244 3-303 80-335 (337)
94 2huf_A Alanine glyoxylate amin 99.9 8.6E-27 3E-31 204.2 13.0 257 5-304 85-382 (393)
95 3b46_A Aminotransferase BNA3; 99.9 2.2E-25 7.6E-30 198.5 22.1 247 3-288 130-428 (447)
96 1iug_A Putative aspartate amin 99.9 1.2E-25 4.3E-30 193.8 19.7 253 5-304 66-347 (352)
97 3qgu_A LL-diaminopimelate amin 99.9 3.5E-26 1.2E-30 203.9 16.1 258 2-304 143-439 (449)
98 1vjo_A Alanine--glyoxylate ami 99.9 1.8E-26 6.1E-31 202.2 13.5 255 3-302 97-392 (393)
99 3f0h_A Aminotransferase; RER07 99.9 5E-26 1.7E-30 198.2 16.2 256 3-304 83-373 (376)
100 3ihj_A Alanine aminotransferas 99.9 2.4E-25 8.1E-30 200.5 21.0 259 3-304 165-492 (498)
101 3frk_A QDTB; aminotransferase, 99.9 3.2E-26 1.1E-30 199.3 14.4 274 3-305 63-364 (373)
102 3ppl_A Aspartate aminotransfer 99.9 1.5E-25 5E-30 198.6 18.5 251 14-304 133-419 (427)
103 3ffr_A Phosphoserine aminotran 99.9 1.7E-25 5.8E-30 193.6 18.0 253 3-304 73-359 (362)
104 1m32_A 2-aminoethylphosphonate 99.9 1E-26 3.5E-31 201.5 9.9 258 3-305 68-365 (366)
105 3ei9_A LL-diaminopimelate amin 99.9 1.2E-25 4E-30 199.5 16.8 259 2-302 130-425 (432)
106 3e2y_A Kynurenine-oxoglutarate 99.9 6.3E-25 2.2E-29 193.4 21.2 257 5-303 100-407 (410)
107 3uwc_A Nucleotide-sugar aminot 99.9 5.5E-26 1.9E-30 197.8 14.1 276 3-305 65-371 (374)
108 2yrr_A Aminotransferase, class 99.9 1.4E-25 4.8E-30 193.4 16.3 253 6-304 68-352 (353)
109 3fkd_A L-threonine-O-3-phospha 99.9 7.5E-26 2.6E-30 195.3 14.0 250 3-304 79-341 (350)
110 3e9k_A Kynureninase; kynurenin 99.9 6E-27 2E-31 209.7 6.8 268 3-305 140-461 (465)
111 3f9t_A TDC, L-tyrosine decarbo 99.9 8.6E-26 3E-30 197.8 13.8 236 13-302 122-395 (397)
112 3ju7_A Putative PLP-dependent 99.9 6.2E-25 2.1E-29 191.1 18.8 275 3-303 65-369 (377)
113 2ch1_A 3-hydroxykynurenine tra 99.9 5.4E-26 1.8E-30 199.3 12.2 258 5-304 84-382 (396)
114 2aeu_A Hypothetical protein MJ 99.9 4.1E-25 1.4E-29 192.2 17.3 258 6-305 92-371 (374)
115 3nyt_A Aminotransferase WBPE; 99.9 1.1E-24 3.8E-29 189.2 19.7 273 3-304 62-359 (367)
116 3f6t_A Aspartate aminotransfer 99.9 3.5E-25 1.2E-29 200.9 16.3 125 10-139 189-330 (533)
117 2bwn_A 5-aminolevulinate synth 99.9 1.8E-24 6.2E-29 190.0 20.1 246 12-305 130-400 (401)
118 2oga_A Transaminase; PLP-depen 99.9 1.6E-24 5.3E-29 190.3 19.4 275 3-305 90-396 (399)
119 3ez1_A Aminotransferase MOCR f 99.9 1.2E-24 4.2E-29 192.4 18.6 251 14-304 124-414 (423)
120 3if2_A Aminotransferase; YP_26 99.9 1.3E-24 4.4E-29 193.5 18.5 270 3-304 118-439 (444)
121 3asa_A LL-diaminopimelate amin 99.9 6.1E-25 2.1E-29 193.0 15.3 259 3-305 107-393 (400)
122 3g7q_A Valine-pyruvate aminotr 99.9 3.2E-24 1.1E-28 189.3 19.9 267 3-304 110-412 (417)
123 1b9h_A AHBA synthase, protein 99.9 4E-24 1.4E-28 187.0 20.0 227 3-251 65-323 (388)
124 3dr4_A Putative perosamine syn 99.9 1.2E-23 4.1E-28 184.2 22.6 277 3-305 83-389 (391)
125 3rq1_A Aminotransferase class 99.9 4.3E-24 1.5E-28 188.6 18.9 250 3-306 114-416 (418)
126 1jg8_A L-ALLO-threonine aldola 99.9 8.1E-25 2.8E-29 188.5 12.9 250 5-304 68-345 (347)
127 3t18_A Aminotransferase class 99.9 5.7E-24 1.9E-28 187.6 18.2 249 3-305 113-410 (413)
128 3mad_A Sphingosine-1-phosphate 99.9 2E-24 6.8E-29 195.7 15.6 249 5-304 175-468 (514)
129 3b1d_A Betac-S lyase; HET: PLP 99.9 9.2E-27 3.1E-31 204.1 0.0 261 3-303 101-391 (392)
130 3bwn_A AT1G70560, L-tryptophan 99.9 5E-25 1.7E-29 192.9 11.0 261 3-303 103-385 (391)
131 1qz9_A Kynureninase; kynurenin 99.9 5.4E-24 1.9E-28 187.8 17.1 246 12-305 116-402 (416)
132 1mdo_A ARNB aminotransferase; 99.9 1.5E-23 5.1E-28 183.6 19.7 275 3-304 66-385 (393)
133 3d6k_A Putative aminotransfera 99.9 1.1E-23 3.6E-28 186.4 18.6 251 14-304 131-417 (422)
134 2fnu_A Aminotransferase; prote 99.9 2E-23 6.8E-28 181.6 18.9 275 3-306 59-373 (375)
135 3ke3_A Putative serine-pyruvat 99.9 1.4E-24 4.9E-29 189.3 11.7 262 3-305 63-376 (379)
136 4f4e_A Aromatic-amino-acid ami 99.9 4.1E-23 1.4E-27 182.5 20.9 241 8-302 137-419 (420)
137 4eu1_A Mitochondrial aspartate 99.9 9.4E-23 3.2E-27 179.6 22.9 178 9-191 126-343 (409)
138 7aat_A Aspartate aminotransfer 99.9 1.8E-22 6.1E-27 177.3 23.8 122 10-136 119-264 (401)
139 1uu1_A Histidinol-phosphate am 99.9 3.1E-24 1E-28 184.1 12.3 210 3-249 88-309 (335)
140 3mc6_A Sphingosine-1-phosphate 99.9 2.5E-24 8.7E-29 194.3 11.7 240 15-304 159-436 (497)
141 3meb_A Aspartate aminotransfer 99.9 5.2E-23 1.8E-27 183.2 19.6 256 7-306 138-445 (448)
142 3ht4_A Aluminum resistance pro 99.9 1.2E-22 4.2E-27 179.0 21.4 227 3-244 95-345 (431)
143 2zy4_A L-aspartate beta-decarb 99.9 2.4E-23 8.2E-28 189.0 17.3 127 10-139 190-332 (546)
144 3fsl_A Aromatic-amino-acid ami 99.9 1.3E-22 4.5E-27 177.8 21.1 240 8-301 115-396 (397)
145 3a9z_A Selenocysteine lyase; P 99.9 2.7E-23 9.2E-28 184.3 16.0 270 12-304 108-427 (432)
146 3hbx_A GAD 1, glutamate decarb 99.9 2.7E-23 9.1E-28 187.3 16.0 246 16-303 156-442 (502)
147 2c81_A Glutamine-2-deoxy-scyll 99.9 2.6E-22 9E-27 177.2 21.7 227 3-251 69-342 (418)
148 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 4.1E-22 1.4E-26 177.0 22.4 270 11-303 107-430 (437)
149 3k7y_A Aspartate aminotransfer 99.9 4.6E-22 1.6E-26 174.2 21.5 243 6-305 113-405 (405)
150 3ruy_A Ornithine aminotransfer 99.9 1.1E-22 3.9E-27 178.0 16.8 239 14-302 127-391 (392)
151 2dgk_A GAD-beta, GADB, glutama 99.9 8.8E-23 3E-27 182.0 16.3 249 15-303 141-432 (452)
152 2dkj_A Serine hydroxymethyltra 99.9 2.7E-22 9.1E-27 176.4 19.1 259 5-304 100-387 (407)
153 2hox_A ALLIIN lyase 1; cystein 99.9 3.8E-23 1.3E-27 182.8 13.6 250 11-304 152-424 (427)
154 1v72_A Aldolase; PLP-dependent 99.9 2.1E-21 7.3E-26 167.5 24.1 244 5-304 74-352 (356)
155 3lws_A Aromatic amino acid bet 99.9 6E-23 2.1E-27 177.5 14.2 225 5-252 77-321 (357)
156 3b8x_A WBDK, pyridoxamine 5-ph 99.9 1.6E-21 5.5E-26 170.6 23.1 265 11-303 77-390 (390)
157 1rv3_A Serine hydroxymethyltra 99.9 1.5E-22 5.2E-27 181.6 16.7 255 5-303 125-429 (483)
158 2eh6_A Acoat, acetylornithine 99.9 2.5E-22 8.6E-27 174.7 17.0 238 12-302 114-371 (375)
159 1yaa_A Aspartate aminotransfer 99.9 3.9E-22 1.3E-26 175.8 18.0 243 8-305 118-411 (412)
160 2x3l_A ORN/Lys/Arg decarboxyla 99.9 2.3E-22 7.9E-27 178.7 16.6 243 5-305 87-353 (446)
161 2c0r_A PSAT, phosphoserine ami 99.9 1.4E-23 4.8E-28 181.8 8.4 247 3-303 80-359 (362)
162 1ajs_A Aspartate aminotransfer 99.9 6E-22 2.1E-26 174.5 18.5 243 9-305 120-411 (412)
163 2z67_A O-phosphoseryl-tRNA(SEC 99.9 1.4E-22 4.9E-27 180.7 13.4 172 13-192 175-369 (456)
164 2q7w_A Aspartate aminotransfer 99.9 6.3E-22 2.2E-26 173.4 16.9 238 11-302 117-396 (396)
165 3nx3_A Acoat, acetylornithine 99.9 1.4E-22 4.6E-27 177.7 12.1 250 12-304 122-394 (395)
166 3vp6_A Glutamate decarboxylase 99.9 2.9E-22 1E-26 180.9 14.1 177 13-195 191-411 (511)
167 3pj0_A LMO0305 protein; struct 99.9 4.1E-22 1.4E-26 172.4 14.1 241 5-288 78-338 (359)
168 2po3_A 4-dehydrase; external a 99.9 7.1E-21 2.4E-25 168.3 22.3 223 3-249 79-328 (424)
169 1w23_A Phosphoserine aminotran 99.9 7.8E-23 2.7E-27 176.9 9.2 244 5-303 82-358 (360)
170 2ord_A Acoat, acetylornithine 99.9 2E-22 6.8E-27 176.8 10.9 240 14-304 128-396 (397)
171 1wyu_B Glycine dehydrogenase s 99.9 2.6E-22 8.8E-27 179.9 11.8 126 11-141 148-289 (474)
172 1o69_A Aminotransferase; struc 99.9 1.4E-20 4.8E-25 164.9 22.5 226 3-252 59-333 (394)
173 2vi8_A Serine hydroxymethyltra 99.9 1.5E-21 5.3E-26 171.4 16.2 260 5-305 100-387 (405)
174 2ay1_A Aroat, aromatic amino a 99.9 7.7E-22 2.6E-26 172.8 14.2 120 12-136 115-257 (394)
175 4adb_A Succinylornithine trans 99.9 2.3E-22 7.9E-27 176.8 10.4 245 13-304 126-399 (406)
176 3n0l_A Serine hydroxymethyltra 99.9 9.7E-21 3.3E-25 167.0 20.7 260 5-304 102-388 (417)
177 1vef_A Acetylornithine/acetyl- 99.9 1.3E-21 4.5E-26 171.4 15.0 238 12-302 128-394 (395)
178 1js3_A DDC;, DOPA decarboxylas 99.9 6.4E-22 2.2E-26 178.0 12.8 241 17-303 185-472 (486)
179 3ecd_A Serine hydroxymethyltra 99.9 1.1E-20 3.9E-25 166.9 19.6 259 5-304 109-396 (425)
180 1wyu_A Glycine dehydrogenase ( 99.9 8.6E-21 3E-25 168.5 18.8 124 10-141 146-279 (438)
181 3e77_A Phosphoserine aminotran 99.9 1.3E-21 4.5E-26 168.7 11.4 249 5-303 92-373 (377)
182 1c4k_A Protein (ornithine deca 99.9 2.2E-20 7.6E-25 173.6 20.2 184 5-195 204-442 (730)
183 1svv_A Threonine aldolase; str 99.9 6.8E-21 2.3E-25 164.5 15.6 246 5-304 81-357 (359)
184 2pb2_A Acetylornithine/succiny 99.9 6.1E-21 2.1E-25 168.5 15.0 246 13-304 144-417 (420)
185 2okj_A Glutamate decarboxylase 99.9 2.2E-21 7.4E-26 175.3 12.3 121 15-141 189-331 (504)
186 3k40_A Aromatic-L-amino-acid d 99.9 2.3E-21 7.9E-26 173.5 11.6 246 13-304 181-470 (475)
187 2qma_A Diaminobutyrate-pyruvat 99.9 3.8E-21 1.3E-25 173.4 13.0 246 14-305 201-496 (497)
188 4e1o_A HDC, histidine decarbox 99.9 3.6E-21 1.2E-25 172.7 12.5 246 13-304 187-477 (481)
189 1sff_A 4-aminobutyrate aminotr 99.8 1.2E-20 4.1E-25 166.9 15.4 253 9-305 124-424 (426)
190 2fyf_A PSAT, phosphoserine ami 99.8 1.6E-21 5.6E-26 171.0 9.8 254 3-304 109-397 (398)
191 3gbx_A Serine hydroxymethyltra 99.8 2E-20 7E-25 165.0 16.4 259 5-304 107-395 (420)
192 2oat_A Ornithine aminotransfer 99.8 3.4E-20 1.2E-24 164.6 17.7 245 12-304 164-438 (439)
193 3qm2_A Phosphoserine aminotran 99.8 5.4E-21 1.8E-25 165.8 11.2 249 3-303 103-379 (386)
194 4h51_A Aspartate aminotransfer 99.8 6.1E-21 2.1E-25 167.2 11.6 153 10-167 133-316 (420)
195 1z7d_A Ornithine aminotransfer 99.8 2.1E-20 7.3E-25 165.6 15.0 244 12-304 153-428 (433)
196 2jis_A Cysteine sulfinic acid 99.8 1.5E-20 5.1E-25 170.2 14.2 118 16-139 205-343 (515)
197 2eo5_A 419AA long hypothetical 99.8 8.3E-20 2.8E-24 161.2 17.4 238 13-305 128-418 (419)
198 2vyc_A Biodegradative arginine 99.8 7.3E-20 2.5E-24 171.5 16.3 180 5-192 236-464 (755)
199 2a7v_A Serine hydroxymethyltra 99.8 2.2E-19 7.5E-24 160.1 18.3 259 4-303 134-439 (490)
200 3h7f_A Serine hydroxymethyltra 99.8 2.9E-19 9.8E-24 159.0 19.1 263 5-304 122-413 (447)
201 2ez2_A Beta-tyrosinase, tyrosi 99.8 1.3E-19 4.6E-24 161.6 16.9 135 5-148 105-281 (456)
202 1s0a_A Adenosylmethionine-8-am 99.8 1.9E-19 6.6E-24 159.4 16.2 244 13-304 133-423 (429)
203 3i4j_A Aminotransferase, class 99.8 6.8E-20 2.3E-24 162.3 12.0 252 12-304 119-427 (430)
204 3dxv_A Alpha-amino-epsilon-cap 99.8 2.6E-19 9E-24 159.0 13.9 242 12-305 128-425 (439)
205 1zod_A DGD, 2,2-dialkylglycine 99.8 3.2E-19 1.1E-23 158.2 14.3 252 13-304 127-431 (433)
206 3a8u_X Omega-amino acid--pyruv 99.8 6.5E-19 2.2E-23 156.9 14.4 245 13-305 141-447 (449)
207 1ax4_A Tryptophanase; tryptoph 99.8 1.3E-18 4.6E-23 155.6 16.0 263 5-303 106-439 (467)
208 3l44_A Glutamate-1-semialdehyd 99.8 4.5E-19 1.5E-23 157.2 12.4 241 13-304 136-429 (434)
209 3n5m_A Adenosylmethionine-8-am 99.8 4.8E-19 1.7E-23 157.9 11.7 253 13-304 138-451 (452)
210 3m5u_A Phosphoserine aminotran 99.8 6E-19 2E-23 151.6 11.0 244 5-303 84-354 (361)
211 3gju_A Putative aminotransfera 99.8 4.8E-18 1.7E-22 151.7 15.2 246 13-304 143-455 (460)
212 2epj_A Glutamate-1-semialdehyd 99.8 1.7E-18 5.9E-23 153.5 11.2 247 11-304 135-430 (434)
213 3tfu_A Adenosylmethionine-8-am 99.8 1.8E-18 6.2E-23 154.1 11.3 246 13-305 165-453 (457)
214 2cy8_A D-phgat, D-phenylglycin 99.8 1.5E-18 5.1E-23 154.7 10.4 243 13-304 138-434 (453)
215 2cjg_A L-lysine-epsilon aminot 99.8 3.1E-18 1.1E-22 152.4 12.1 242 14-304 157-447 (449)
216 3k28_A Glutamate-1-semialdehyd 99.8 3.1E-18 1.1E-22 151.6 11.8 246 13-305 134-427 (429)
217 3dod_A Adenosylmethionine-8-am 99.8 3.9E-18 1.3E-22 151.8 12.1 245 14-304 136-442 (448)
218 4a6r_A Omega transaminase; tra 99.7 2.1E-17 7.2E-22 147.5 15.7 242 13-304 142-448 (459)
219 3oks_A 4-aminobutyrate transam 99.7 1.2E-17 4.1E-22 148.7 13.9 246 13-304 147-450 (451)
220 3fq8_A Glutamate-1-semialdehyd 99.7 1.3E-18 4.5E-23 153.9 7.4 248 13-304 133-426 (427)
221 4e77_A Glutamate-1-semialdehyd 99.7 1.1E-17 3.7E-22 148.1 12.5 249 12-304 133-428 (429)
222 2oqx_A Tryptophanase; lyase, p 99.7 2.7E-17 9.2E-22 147.1 15.0 264 5-304 104-441 (467)
223 4ffc_A 4-aminobutyrate aminotr 99.7 3E-17 1E-21 146.2 14.7 246 13-304 150-448 (453)
224 3n75_A LDC, lysine decarboxyla 99.7 6.1E-17 2.1E-21 149.4 15.3 180 5-193 226-443 (715)
225 3i5t_A Aminotransferase; pyrid 99.7 3.4E-17 1.1E-21 146.7 12.7 244 13-304 145-453 (476)
226 3hmu_A Aminotransferase, class 99.7 2.7E-17 9.2E-22 147.1 11.0 245 13-304 147-451 (472)
227 2e7u_A Glutamate-1-semialdehyd 99.7 8.2E-17 2.8E-21 142.2 13.5 220 12-251 132-398 (424)
228 2yky_A Beta-transaminase; tran 99.5 3.9E-18 1.3E-22 151.2 0.0 251 12-305 180-460 (465)
229 3ou5_A Serine hydroxymethyltra 99.7 7.7E-15 2.6E-19 126.2 18.9 186 2-193 132-355 (490)
230 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 3.2E-16 1.1E-20 135.2 10.0 183 4-192 148-355 (501)
231 1ohv_A 4-aminobutyrate aminotr 99.6 1.2E-15 4E-20 136.5 13.2 206 49-305 241-471 (472)
232 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 1.2E-15 4.1E-20 133.2 10.7 175 13-193 143-338 (450)
233 4ao9_A Beta-phenylalanine amin 99.4 1.5E-12 5E-17 114.8 8.8 240 13-305 168-446 (454)
234 4atq_A 4-aminobutyrate transam 99.3 1.8E-11 6.1E-16 108.3 11.8 206 59-305 225-455 (456)
235 4e3q_A Pyruvate transaminase; 99.2 3.5E-11 1.2E-15 106.8 7.6 199 59-304 235-467 (473)
236 4a0g_A Adenosylmethionine-8-am 99.1 9.3E-11 3.2E-15 110.9 7.7 202 51-305 577-828 (831)
237 1tks_A 3,4-dihydroxy-2-butanon 80.5 3.5 0.00012 31.5 5.6 43 53-95 152-194 (204)
238 3mio_A DHBP synthase, 3,4-dihy 69.0 12 0.0004 28.7 5.9 43 53-95 151-194 (206)
239 2ioj_A Hypothetical protein AF 66.9 19 0.00066 25.4 6.6 49 41-95 54-103 (139)
240 1snn_A DHBP synthase, 3,4-dihy 63.3 13 0.00045 28.9 5.2 42 53-95 171-212 (227)
241 4gqr_A Pancreatic alpha-amylas 63.2 5.1 0.00017 35.2 3.4 86 11-100 6-100 (496)
242 3tla_A MCCF; serine protease, 61.8 17 0.00059 30.7 6.3 69 10-78 39-127 (371)
243 1g57_A DHBP synthase, 3,4-dihy 61.0 20 0.00069 27.7 5.9 36 59-95 166-201 (217)
244 2qlc_A DNA repair protein RADC 60.1 12 0.00041 26.2 4.2 43 51-94 58-107 (126)
245 3ghf_A Septum site-determining 59.3 37 0.0013 23.4 6.6 55 36-94 13-78 (120)
246 3kts_A Glycerol uptake operon 58.1 19 0.00065 27.2 5.3 49 48-101 17-67 (192)
247 3gi1_A LBP, laminin-binding pr 56.3 26 0.00088 28.4 6.3 69 13-95 178-256 (286)
248 1g94_A Alpha-amylase; beta-alp 56.2 7.8 0.00027 33.8 3.3 32 69-100 57-88 (448)
249 4h1h_A LMO1638 protein; MCCF-l 56.2 17 0.00058 30.2 5.2 69 10-78 8-96 (327)
250 3io5_A Recombination and repai 56.1 48 0.0016 27.5 7.7 84 13-100 57-173 (333)
251 3bzy_B ESCU; auto cleavage pro 55.9 7.6 0.00026 24.9 2.4 21 78-98 28-48 (83)
252 3ic5_A Putative saccharopine d 54.4 43 0.0015 22.0 6.5 76 7-94 21-97 (118)
253 3ff4_A Uncharacterized protein 54.1 7.1 0.00024 27.1 2.2 40 51-98 73-112 (122)
254 2o1e_A YCDH; alpha-beta protei 53.7 34 0.0012 28.1 6.7 68 13-94 189-266 (312)
255 2al1_A Enolase 1, 2-phospho-D- 51.6 26 0.00089 30.4 5.8 84 10-95 285-371 (436)
256 3sr3_A Microcin immunity prote 51.6 26 0.00087 29.2 5.6 69 10-78 9-97 (336)
257 1pq4_A Periplasmic binding pro 51.4 58 0.002 26.3 7.7 68 13-94 189-264 (291)
258 4e5s_A MCCFLIKE protein (BA_56 51.4 23 0.00079 29.4 5.3 69 10-78 8-96 (331)
259 3bh4_A Alpha-amylase; calcium, 51.0 12 0.00042 32.8 3.8 32 69-100 71-102 (483)
260 1ud2_A Amylase, alpha-amylase; 50.2 13 0.00044 32.7 3.8 32 69-100 73-104 (480)
261 1wpc_A Glucan 1,4-alpha-maltoh 50.0 13 0.00044 32.7 3.8 32 69-100 75-106 (485)
262 1hvx_A Alpha-amylase; hydrolas 49.8 13 0.00044 33.0 3.8 32 69-100 74-105 (515)
263 3mwd_B ATP-citrate synthase; A 49.8 30 0.001 28.8 5.7 73 22-99 65-140 (334)
264 1vhx_A Putative holliday junct 49.6 41 0.0014 24.2 5.8 53 49-101 43-102 (150)
265 1mxg_A Alpha amylase; hyperthe 48.9 14 0.00048 32.0 3.8 32 69-100 79-110 (435)
266 1y5e_A Molybdenum cofactor bio 48.5 17 0.0006 26.7 3.7 60 12-74 20-86 (169)
267 2vt1_B Surface presentation of 48.5 11 0.00039 24.7 2.4 21 78-98 28-48 (93)
268 3sho_A Transcriptional regulat 48.4 42 0.0014 24.7 6.0 77 14-94 39-118 (187)
269 1k4i_A 3,4-dihydroxy-2-butanon 48.2 31 0.0011 26.9 5.1 42 53-95 160-212 (233)
270 1gcy_A Glucan 1,4-alpha-maltot 48.1 15 0.0005 32.8 3.8 86 12-100 13-116 (527)
271 3t7y_A YOP proteins translocat 48.1 11 0.00036 25.1 2.2 25 74-98 39-63 (97)
272 2yxb_A Coenzyme B12-dependent 46.7 52 0.0018 23.9 6.1 74 15-90 19-97 (161)
273 1lwj_A 4-alpha-glucanotransfer 46.5 13 0.00045 32.2 3.2 29 71-99 64-92 (441)
274 3c01_E Surface presentation of 46.2 12 0.0004 24.9 2.2 21 78-98 28-48 (98)
275 3qtp_A Enolase 1; glycolysis, 46.1 40 0.0014 29.2 6.0 85 9-95 290-378 (441)
276 4aie_A Glucan 1,6-alpha-glucos 45.5 13 0.00046 33.0 3.2 29 72-100 75-103 (549)
277 1y80_A Predicted cobalamin bin 45.5 66 0.0023 24.4 6.8 75 23-99 100-180 (210)
278 1ht6_A AMY1, alpha-amylase iso 44.6 15 0.0005 31.5 3.2 30 71-100 63-92 (405)
279 2akz_A Gamma enolase, neural; 44.4 35 0.0012 29.6 5.5 84 10-95 282-368 (439)
280 2orv_A Thymidine kinase; TP4A 44.0 39 0.0013 26.5 5.2 89 4-99 37-125 (234)
281 2dh2_A 4F2 cell-surface antige 43.6 14 0.00048 31.9 2.9 31 70-100 75-105 (424)
282 2ya0_A Putative alkaline amylo 43.6 14 0.00047 34.4 3.0 25 76-100 254-278 (714)
283 1ry2_A Acetyl-coenzyme A synth 43.5 52 0.0018 30.1 6.9 75 11-86 136-212 (663)
284 1wza_A Alpha-amylase A; hydrol 43.5 16 0.00056 32.1 3.4 28 72-99 77-104 (488)
285 2guy_A Alpha-amylase A; (beta- 43.4 16 0.00053 32.1 3.2 31 70-100 91-121 (478)
286 1jae_A Alpha-amylase; glycosid 43.0 12 0.00042 32.7 2.5 85 12-100 7-98 (471)
287 2e8y_A AMYX protein, pullulana 42.7 11 0.00037 35.2 2.1 26 75-100 314-339 (718)
288 1xp8_A RECA protein, recombina 42.1 44 0.0015 28.2 5.7 12 60-71 152-163 (366)
289 3dhu_A Alpha-amylase; structur 42.1 17 0.0006 31.5 3.3 28 72-99 79-106 (449)
290 3zq4_A Ribonuclease J 1, RNAse 41.8 83 0.0028 28.2 7.7 76 11-91 321-408 (555)
291 3re1_A Uroporphyrinogen-III sy 41.6 14 0.00046 29.6 2.3 56 13-70 13-76 (269)
292 1iv0_A Hypothetical protein; r 41.4 45 0.0015 22.0 4.5 52 49-100 39-96 (98)
293 3mfq_A TROA, high-affinity zin 41.2 26 0.0009 28.3 4.0 70 15-95 164-243 (282)
294 2z1k_A (NEO)pullulanase; hydro 40.9 15 0.0005 32.2 2.6 31 70-100 90-120 (475)
295 2aaa_A Alpha-amylase; glycosid 40.4 16 0.00056 32.0 2.9 32 69-100 90-121 (484)
296 2wc7_A Alpha amylase, catalyti 39.6 17 0.00057 32.0 2.8 29 72-100 98-126 (488)
297 3v7e_A Ribosome-associated pro 39.5 61 0.0021 20.4 4.8 44 50-97 16-60 (82)
298 1qyd_A Pinoresinol-lariciresin 39.5 1.4E+02 0.0049 23.7 9.2 87 6-94 20-112 (313)
299 1ea9_C Cyclomaltodextrinase; h 39.3 20 0.00068 32.4 3.3 27 74-100 216-242 (583)
300 1zja_A Trehalulose synthase; s 39.2 19 0.00067 32.3 3.2 30 71-100 74-103 (557)
301 1j0h_A Neopullulanase; beta-al 38.7 20 0.00068 32.5 3.2 28 73-100 219-246 (588)
302 3mw8_A Uroporphyrinogen-III sy 38.7 21 0.00073 27.8 3.1 54 14-70 1-60 (240)
303 1iuk_A Hypothetical protein TT 38.3 16 0.00054 25.9 2.0 21 80-100 107-127 (140)
304 1wzl_A Alpha-amylase II; pullu 38.2 18 0.00063 32.7 2.9 28 73-100 216-243 (585)
305 8abp_A L-arabinose-binding pro 38.0 40 0.0014 26.9 4.8 65 27-96 20-89 (306)
306 3bc9_A AMYB, alpha amylase, ca 37.8 23 0.00078 32.2 3.5 28 72-99 204-231 (599)
307 4es6_A Uroporphyrinogen-III sy 37.6 13 0.00045 29.4 1.6 55 14-70 6-68 (254)
308 3m9w_A D-xylose-binding peripl 37.3 54 0.0018 26.3 5.5 70 21-95 14-88 (313)
309 2d59_A Hypothetical protein PH 37.1 27 0.00094 24.8 3.2 40 53-99 94-133 (144)
310 1d3c_A Cyclodextrin glycosyltr 36.7 22 0.00075 32.9 3.2 31 70-100 109-139 (686)
311 3tha_A Tryptophan synthase alp 36.5 78 0.0027 25.0 5.9 80 15-95 118-204 (252)
312 3inp_A D-ribulose-phosphate 3- 36.5 1E+02 0.0034 24.3 6.6 84 33-118 128-223 (246)
313 1ua7_A Alpha-amylase; beta-alp 36.4 18 0.00062 31.1 2.5 29 72-100 70-98 (422)
314 1zco_A 2-dehydro-3-deoxyphosph 36.2 57 0.002 26.0 5.2 66 38-103 129-205 (262)
315 1qho_A Alpha-amylase; glycosid 36.2 23 0.00077 32.8 3.2 30 71-100 102-131 (686)
316 1m53_A Isomaltulose synthase; 36.1 19 0.00065 32.4 2.7 29 72-100 88-116 (570)
317 2ptz_A Enolase; lyase, glycoly 36.1 51 0.0018 28.5 5.3 85 10-96 284-373 (432)
318 3edf_A FSPCMD, cyclomaltodextr 35.6 24 0.00081 32.1 3.2 28 73-100 195-222 (601)
319 3bmv_A Cyclomaltodextrin gluca 35.5 24 0.00081 32.7 3.2 31 70-100 110-140 (683)
320 3o63_A Probable thiamine-phosp 35.3 45 0.0016 26.2 4.4 49 50-98 46-104 (243)
321 3uow_A GMP synthetase; structu 35.2 59 0.002 29.2 5.7 75 15-93 8-86 (556)
322 1cyg_A Cyclodextrin glucanotra 35.2 24 0.00082 32.6 3.2 30 70-99 105-134 (680)
323 1uok_A Oligo-1,6-glucosidase; 35.1 24 0.00081 31.7 3.1 29 72-100 74-102 (558)
324 3faw_A Reticulocyte binding pr 34.8 23 0.00078 33.9 3.0 26 75-100 368-393 (877)
325 3tqp_A Enolase; energy metabol 34.7 45 0.0015 28.8 4.6 84 10-95 275-363 (428)
326 1tk9_A Phosphoheptose isomeras 34.5 1.3E+02 0.0045 21.8 8.0 36 55-94 106-141 (188)
327 3b1s_B Flagellar biosynthetic 40.7 8.4 0.00029 25.0 0.0 24 77-100 27-50 (87)
328 2ya1_A Putative alkaline amylo 34.3 21 0.00072 34.8 2.8 25 76-100 561-585 (1014)
329 3aj7_A Oligo-1,6-glucosidase; 34.1 26 0.00089 31.7 3.2 29 72-100 83-111 (589)
330 2fym_A Enolase; RNA degradosom 34.1 77 0.0026 27.3 6.1 82 14-97 283-369 (431)
331 4aef_A Neopullulanase (alpha-a 34.0 21 0.00073 32.7 2.6 29 72-100 281-309 (645)
332 1g5a_A Amylosucrase; glycosylt 33.6 31 0.001 31.6 3.6 27 74-100 160-186 (628)
333 2bhu_A Maltooligosyltrehalose 33.3 23 0.00077 32.2 2.7 27 74-100 190-216 (602)
334 3aie_A Glucosyltransferase-SI; 33.2 31 0.0011 32.8 3.6 30 71-100 687-716 (844)
335 2jli_A YSCU, YOP proteins tran 32.7 25 0.00085 24.4 2.2 25 74-98 68-92 (123)
336 3nl6_A Thiamine biosynthetic b 32.7 45 0.0015 29.8 4.4 47 51-97 29-76 (540)
337 2zic_A Dextran glucosidase; TI 32.6 25 0.00084 31.5 2.8 29 72-100 74-102 (543)
338 3ttq_A Dextransucrase; (beta/a 32.5 34 0.0012 33.3 3.7 32 69-100 905-936 (1108)
339 3zss_A Putative glucanohydrola 32.3 36 0.0012 31.5 3.9 27 74-100 318-344 (695)
340 3klk_A Glucansucrase; native f 32.2 33 0.0011 33.4 3.6 32 69-100 738-769 (1039)
341 1y81_A Conserved hypothetical 32.0 40 0.0014 23.7 3.3 39 55-100 88-126 (138)
342 2ze0_A Alpha-glucosidase; TIM 31.9 23 0.00078 31.8 2.4 29 72-100 74-102 (555)
343 1gjw_A Maltodextrin glycosyltr 31.8 26 0.00087 32.1 2.8 25 76-100 181-205 (637)
344 3vnd_A TSA, tryptophan synthas 31.6 1.1E+02 0.0036 24.5 6.1 11 36-46 120-130 (267)
345 3uj2_A Enolase 1; enzyme funct 31.3 53 0.0018 28.6 4.5 84 10-95 301-389 (449)
346 1u94_A RECA protein, recombina 31.3 81 0.0028 26.4 5.6 37 59-95 140-195 (356)
347 2wan_A Pullulanase; hydrolase, 31.3 32 0.0011 33.1 3.5 29 72-100 525-555 (921)
348 1xx6_A Thymidine kinase; NESG, 31.3 75 0.0026 23.8 4.9 84 8-95 30-113 (191)
349 4aee_A Alpha amylase, catalyti 31.2 29 0.001 32.1 3.1 28 73-100 308-335 (696)
350 1vc3_B L-aspartate-alpha-decar 31.2 34 0.0012 22.5 2.5 34 8-46 52-85 (96)
351 3bzs_A ESCU; auto cleavage pro 31.2 27 0.00092 24.8 2.2 20 79-98 83-102 (137)
352 3m07_A Putative alpha amylase; 30.9 32 0.0011 31.4 3.2 28 73-100 199-226 (618)
353 3czg_A Sucrose hydrolase; (alp 30.8 30 0.001 31.7 3.0 27 74-100 153-179 (644)
354 3rfq_A Pterin-4-alpha-carbinol 30.8 23 0.00077 26.7 1.9 60 24-83 47-112 (185)
355 1m7x_A 1,4-alpha-glucan branch 30.7 26 0.0009 31.9 2.6 27 74-100 202-228 (617)
356 3jy6_A Transcriptional regulat 30.7 70 0.0024 25.0 5.0 62 28-97 26-93 (276)
357 1zl0_A Hypothetical protein PA 30.6 77 0.0027 26.0 5.2 69 10-78 13-98 (311)
358 3vgf_A Malto-oligosyltrehalose 30.6 24 0.00083 31.7 2.4 28 73-100 164-191 (558)
359 3kbq_A Protein TA0487; structu 30.4 60 0.002 24.0 4.1 71 14-85 12-87 (172)
360 1chr_A Chloromuconate cycloiso 30.4 2.4E+02 0.0081 23.5 8.4 81 16-98 216-298 (370)
361 3nav_A Tryptophan synthase alp 30.0 1.3E+02 0.0044 24.1 6.3 80 15-95 127-213 (271)
362 1sjd_A N-acylamino acid racema 30.0 1.4E+02 0.0046 25.0 6.8 45 49-95 244-289 (368)
363 2j9r_A Thymidine kinase; TK1, 29.8 70 0.0024 24.6 4.5 9 92-100 104-112 (214)
364 3l6u_A ABC-type sugar transpor 29.8 53 0.0018 26.0 4.1 63 28-95 27-94 (293)
365 3hh8_A Metal ABC transporter s 29.3 46 0.0016 27.0 3.6 66 15-94 184-259 (294)
366 2jlj_A YSCU, YOP proteins tran 29.2 30 0.001 24.8 2.2 22 78-99 81-102 (144)
367 3uug_A Multiple sugar-binding 28.9 52 0.0018 26.6 4.0 65 26-95 20-89 (330)
368 3cx3_A Lipoprotein; zinc-bindi 28.8 48 0.0016 26.7 3.7 26 13-45 176-201 (284)
369 3rot_A ABC sugar transporter, 28.4 57 0.0019 26.0 4.1 64 27-95 21-91 (297)
370 3f4w_A Putative hexulose 6 pho 28.3 1.2E+02 0.0039 22.8 5.7 81 15-97 79-166 (211)
371 3e48_A Putative nucleoside-dip 28.3 2E+02 0.007 22.4 7.5 55 36-91 42-98 (289)
372 3e2i_A Thymidine kinase; Zn-bi 28.2 75 0.0026 24.5 4.4 9 92-100 104-112 (219)
373 3llv_A Exopolyphosphatase-rela 28.2 1E+02 0.0035 21.2 5.0 72 9-90 24-95 (141)
374 3lkv_A Uncharacterized conserv 28.1 1.6E+02 0.0056 23.5 6.9 87 6-95 132-225 (302)
375 1jlj_A Gephyrin; globular alph 27.9 49 0.0017 24.8 3.3 62 24-85 32-103 (189)
376 3i6i_A Putative leucoanthocyan 27.6 1.2E+02 0.0042 24.7 6.1 56 36-95 58-116 (346)
377 1x92_A APC5045, phosphoheptose 27.5 1.3E+02 0.0043 22.3 5.7 36 55-94 109-144 (199)
378 3trj_A Phosphoheptose isomeras 27.4 1.3E+02 0.0043 22.6 5.7 39 53-95 108-146 (201)
379 3kjx_A Transcriptional regulat 27.1 1.5E+02 0.0052 24.0 6.6 64 24-94 83-151 (344)
380 2yva_A DNAA initiator-associat 26.8 1.3E+02 0.0045 22.1 5.7 37 54-94 104-140 (196)
381 3otr_A Enolase; structural gen 26.8 58 0.002 28.3 3.9 84 10-95 293-381 (452)
382 3k8k_A Alpha-amylase, SUSG; al 26.7 52 0.0018 30.3 3.9 27 73-99 103-129 (669)
383 2oz8_A MLL7089 protein; struct 26.7 1.4E+02 0.0049 25.1 6.5 73 18-96 222-296 (389)
384 3aml_A OS06G0726400 protein; s 26.3 35 0.0012 32.0 2.7 27 74-100 248-274 (755)
385 2zr9_A Protein RECA, recombina 26.3 1.1E+02 0.0038 25.4 5.6 37 59-95 138-193 (349)
386 1h05_A 3-dehydroquinate dehydr 26.1 65 0.0022 23.0 3.4 64 27-94 32-98 (146)
387 1ji1_A Alpha-amylase I; beta/a 26.0 35 0.0012 31.2 2.6 28 73-100 235-266 (637)
388 3tsm_A IGPS, indole-3-glycerol 25.8 2.5E+02 0.0087 22.4 7.8 78 17-97 98-176 (272)
389 1uhe_A Aspartate 1-decarboxyla 25.5 36 0.0012 22.4 1.8 20 8-27 50-69 (97)
390 3ezx_A MMCP 1, monomethylamine 25.5 1.2E+02 0.004 23.2 5.2 82 15-98 93-185 (215)
391 3lwz_A 3-dehydroquinate dehydr 25.4 1.2E+02 0.004 21.9 4.7 63 29-95 39-104 (153)
392 3bbl_A Regulatory protein of L 25.4 2.2E+02 0.0074 22.2 7.1 65 24-95 23-92 (287)
393 3b0z_B Flagellar biosynthetic 31.0 15 0.00052 25.1 0.0 24 77-100 27-50 (114)
394 3pff_A ATP-citrate synthase; p 25.0 78 0.0027 30.0 4.7 75 21-99 550-626 (829)
395 3qn3_A Enolase; structural gen 24.9 62 0.0021 27.8 3.8 86 10-97 273-363 (417)
396 3gv0_A Transcriptional regulat 24.7 1.7E+02 0.0059 22.8 6.4 65 24-95 25-94 (288)
397 2gjh_A Designed protein; oblig 24.7 67 0.0023 17.9 2.5 25 281-305 3-30 (62)
398 2wsk_A Glycogen debranching en 24.6 43 0.0015 30.8 2.9 26 75-100 240-265 (657)
399 3kip_A 3-dehydroquinase, type 24.5 2.1E+02 0.0071 20.9 6.2 64 28-95 45-114 (167)
400 3ucq_A Amylosucrase; thermosta 24.5 40 0.0014 31.0 2.7 31 70-100 154-184 (655)
401 2pjk_A 178AA long hypothetical 24.4 90 0.0031 23.1 4.2 52 23-74 37-95 (178)
402 1ccw_A Protein (glutamate muta 24.3 1.1E+02 0.0039 21.3 4.6 73 23-97 15-92 (137)
403 1w6t_A Enolase; bacterial infe 24.3 64 0.0022 28.0 3.8 86 10-97 291-381 (444)
404 2kg4_A Growth arrest and DNA-d 24.3 2.1E+02 0.0072 20.9 6.5 58 30-89 77-150 (165)
405 2is8_A Molybdopterin biosynthe 24.3 99 0.0034 22.4 4.4 62 23-84 18-86 (164)
406 1o4u_A Type II quinolic acid p 24.2 2.8E+02 0.0096 22.3 7.9 73 42-119 195-269 (285)
407 1xvl_A Mn transporter, MNTC pr 24.2 1.1E+02 0.0036 25.2 5.0 67 14-94 204-280 (321)
408 3pzt_A Endoglucanase; alpha/be 24.2 49 0.0017 27.3 3.0 20 78-97 106-125 (327)
409 2poz_A Putative dehydratase; o 24.1 1.1E+02 0.0038 25.8 5.2 24 72-95 283-306 (392)
410 2r6j_A Eugenol synthase 1; phe 23.9 2.7E+02 0.0092 22.1 7.5 84 6-95 27-112 (318)
411 3k1d_A 1,4-alpha-glucan-branch 23.9 41 0.0014 31.3 2.6 27 74-100 310-336 (722)
412 2q5c_A NTRC family transcripti 23.8 2.3E+02 0.0078 21.1 6.6 103 6-119 44-150 (196)
413 3plx_B Aspartate 1-decarboxyla 23.6 40 0.0014 22.4 1.8 35 8-47 51-85 (102)
414 3oug_A Aspartate 1-decarboxyla 23.6 36 0.0012 23.0 1.6 20 8-27 79-98 (114)
415 2pa6_A Enolase; glycolysis, ly 23.5 75 0.0026 27.3 4.1 84 10-95 279-365 (427)
416 1jr2_A Uroporphyrinogen-III sy 23.3 67 0.0023 25.7 3.6 57 14-70 21-86 (286)
417 1wcw_A Uroporphyrinogen III sy 23.1 66 0.0022 25.2 3.5 55 13-70 7-69 (261)
418 1i4n_A Indole-3-glycerol phosp 23.1 2.6E+02 0.009 21.9 6.9 84 12-98 74-158 (251)
419 1bf2_A Isoamylase; hydrolase, 23.1 49 0.0017 31.0 3.0 25 76-100 272-296 (750)
420 2vr5_A Glycogen operon protein 23.0 45 0.0015 31.1 2.7 25 76-100 266-290 (718)
421 2duw_A Putative COA-binding pr 23.0 50 0.0017 23.4 2.5 39 55-100 89-127 (145)
422 1oi7_A Succinyl-COA synthetase 22.9 59 0.002 26.3 3.1 59 38-100 65-125 (288)
423 4gud_A Imidazole glycerol phos 22.9 1.2E+02 0.0042 22.7 4.9 48 16-71 4-51 (211)
424 3bjs_A Mandelate racemase/muco 22.9 1.9E+02 0.0066 24.7 6.6 45 49-95 292-337 (428)
425 3hr8_A Protein RECA; alpha and 22.9 1.4E+02 0.0048 24.9 5.5 37 59-95 138-193 (356)
426 3ujp_A Mn transporter subunit; 22.7 73 0.0025 26.0 3.7 25 14-45 190-214 (307)
427 1iv8_A Maltooligosyl trehalose 22.7 50 0.0017 30.7 2.9 32 69-100 58-89 (720)
428 2xbl_A Phosphoheptose isomeras 22.7 1.7E+02 0.0059 21.4 5.7 37 54-94 111-147 (198)
429 3jr2_A Hexulose-6-phosphate sy 22.6 2.5E+02 0.0086 21.2 7.0 9 89-97 165-173 (218)
430 3tb6_A Arabinose metabolism tr 22.6 1.3E+02 0.0045 23.5 5.3 70 26-97 32-107 (298)
431 1n8f_A DAHP synthetase; (beta/ 22.5 1.1E+02 0.0039 25.5 4.7 28 75-102 242-271 (350)
432 2yv1_A Succinyl-COA ligase [AD 22.4 49 0.0017 26.9 2.6 59 38-100 71-131 (294)
433 3h5o_A Transcriptional regulat 22.4 1.9E+02 0.0067 23.3 6.4 68 23-97 76-149 (339)
434 3ctl_A D-allulose-6-phosphate 22.3 2.2E+02 0.0076 21.9 6.3 89 33-123 100-200 (231)
435 1uqr_A 3-dehydroquinate dehydr 22.2 1.3E+02 0.0045 21.7 4.4 65 27-95 31-98 (154)
436 3l0g_A Nicotinate-nucleotide p 22.1 1.1E+02 0.0037 25.0 4.4 72 41-122 208-284 (300)
437 7a3h_A Endoglucanase; hydrolas 22.1 57 0.0019 26.4 3.0 22 78-99 81-102 (303)
438 1gqo_A Dehydroquinase; dehydra 22.1 1.1E+02 0.0039 21.7 4.0 65 27-95 30-97 (143)
439 3ruf_A WBGU; rossmann fold, UD 22.1 3.1E+02 0.011 22.1 8.2 85 6-91 41-143 (351)
440 2gl5_A Putative dehydratase pr 21.9 1.1E+02 0.0036 26.1 4.7 23 73-95 303-325 (410)
441 2yv2_A Succinyl-COA synthetase 21.5 72 0.0025 25.9 3.4 59 38-100 72-132 (297)
442 1uz5_A MOEA protein, 402AA lon 21.5 58 0.002 27.8 2.9 60 13-72 188-258 (402)
443 1tvn_A Cellulase, endoglucanas 21.4 65 0.0022 25.8 3.1 21 78-98 80-100 (293)
444 3vup_A Beta-1,4-mannanase; TIM 21.3 63 0.0022 26.0 3.1 20 78-97 91-110 (351)
445 1mkz_A Molybdenum cofactor bio 21.1 82 0.0028 23.1 3.4 59 24-82 26-91 (172)
446 2gdq_A YITF; mandelate racemas 20.9 1.9E+02 0.0066 24.2 6.1 46 49-96 247-293 (382)
447 3dmy_A Protein FDRA; predicted 20.8 74 0.0025 28.0 3.5 59 36-98 35-94 (480)
448 2csu_A 457AA long hypothetical 20.7 53 0.0018 28.6 2.6 51 50-100 78-131 (457)
449 1wuf_A Hypothetical protein LI 20.7 1.8E+02 0.0063 24.5 6.0 23 73-95 286-308 (393)
450 2prs_A High-affinity zinc upta 20.7 66 0.0023 25.8 3.0 23 13-42 173-195 (284)
451 1bqc_A Protein (beta-mannanase 20.7 68 0.0023 25.8 3.1 20 78-97 66-85 (302)
452 1g01_A Endoglucanase; alpha/be 20.6 67 0.0023 26.8 3.1 22 78-99 91-112 (364)
453 2c45_A Aspartate 1-decarboxyla 20.6 71 0.0024 22.4 2.6 34 9-47 77-110 (139)
454 2whl_A Beta-mannanase, baman5; 20.6 61 0.0021 26.0 2.8 22 76-97 63-84 (294)
455 3tc3_A UV damage endonuclease; 20.6 69 0.0023 26.3 3.0 26 74-99 198-223 (310)
456 3jug_A Beta-mannanase; TIM-bar 20.5 61 0.0021 27.0 2.8 23 77-99 87-109 (345)
457 1uuy_A CNX1, molybdopterin bio 20.5 1E+02 0.0034 22.4 3.7 47 39-85 43-96 (167)
458 3d8t_A Uroporphyrinogen-III sy 20.3 1.1E+02 0.0038 24.4 4.3 54 14-70 33-94 (286)
459 2uyg_A 3-dehydroquinate dehydr 20.3 96 0.0033 22.2 3.3 65 27-95 29-97 (149)
460 3jva_A Dipeptide epimerase; en 20.2 1.6E+02 0.0054 24.4 5.4 27 73-99 268-294 (354)
No 1
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.4e-44 Score=314.53 Aligned_cols=302 Identities=36% Similarity=0.609 Sum_probs=271.1
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
+|+ .++.+++++||+|+++++.|+++...+...++..|++++.+|.+|++++++++++++++|++++|+||+|.+.|++
T Consensus 107 ~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~ 186 (414)
T 3ndn_A 107 AAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFFETPSNPMQSLVDIA 186 (414)
T ss_dssp HHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSCCSEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCccccHH
Confidence 455 4566788999999999999999887666666779999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhh
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 160 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (307)
+|.++|+++|+++|+|++|+.+....+..+|+|+++.|+||+++++..+++|+++++++.+.+.+.......+..+++..
T Consensus 187 ~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~ 266 (414)
T 3ndn_A 187 AVTELAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFN 266 (414)
T ss_dssp HHHHHHHHTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHH
T ss_pred HHHHHHHHcCCEEEEECCCcccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHH
Confidence 99999999999999999999776666667899999999999995543388999999876665455555556677778888
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-----HHHHHH
Q 021783 161 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----LALSKH 235 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 235 (307)
+++...+++.+..+++++.++++.+.++|++++.+..+.++++.++|++.++.++.++.|++++|.+++ .+.+..
T Consensus 267 a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~ 346 (414)
T 3ndn_A 267 AWVLLKGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFE 346 (414)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHH
Confidence 999999999999999999999999999999999998999999999999999988888889999999965 567899
Q ss_pred HHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 236 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 236 ~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
+++.++..++.+++|+.+++.++|...+|..++.+.+.+.|..+++||+|+|.++++++++.|.++|+
T Consensus 347 ~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~e~~~dli~dl~~al~ 414 (414)
T 3ndn_A 347 VLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEDTDDLIADIDRALS 414 (414)
T ss_dssp HHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred HHHhCccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999873
No 2
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=100.00 E-value=5.2e-44 Score=315.32 Aligned_cols=301 Identities=33% Similarity=0.452 Sum_probs=260.1
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
+|+ .++.++++|||+|+++++.|+++...+...++..|++++.++.+|++++++++++++++|++++|+||+|.+.|++
T Consensus 108 ~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~ 187 (430)
T 3ri6_A 108 AAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDETTKLLFLETISNPQLQVADLE 187 (430)
T ss_dssp HHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCCeecCHH
Confidence 455 5666789999999999999999887766677889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChh-H------------------
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-L------------------ 141 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~-~------------------ 141 (307)
+|.++|+++|+++|+|++|+.+....+..+|+|+++.|++|+++|++...+|+++.+.+. +
T Consensus 188 ~i~~la~~~g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~ 267 (430)
T 3ri6_A 188 ALSKVVHAKGIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAF 267 (430)
T ss_dssp HHHHHHHTTTCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHH
T ss_pred HHHHHHHHcCCEEEEECCCcccccCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhH
Confidence 999999999999999999999888788888999999999999987655668888854321 1
Q ss_pred -HHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCC
Q 021783 142 -AKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 220 (307)
Q Consensus 142 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 220 (307)
.+.........+..+++..+|+...+++.+..+++++.++++.+.++|++++.+..+.+|+++++|++.++.++. +.|
T Consensus 268 i~~~~~~~~~~~g~~~~~~~a~l~l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~-g~G 346 (430)
T 3ri6_A 268 LYKARKEVFQNLGPSLSPHNAYLQSLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQF-RYA 346 (430)
T ss_dssp HHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHC-SSC
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhC-CCC
Confidence 111112334466778889999999999999999999999999999999999999999999999999999998888 788
Q ss_pred c-eEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHH
Q 021783 221 S-VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 299 (307)
Q Consensus 221 ~-~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~ 299 (307)
+ +++|.+++.+.+.++++.++..++.+++|+.+++.++|...+|..++.+.+.+.|..+++||+|+|.|+++++++.|+
T Consensus 347 g~~lsf~l~~~~~~~~~~~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~~~dl~~dl~ 426 (430)
T 3ri6_A 347 GSILTFELESKEASYRFMDALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEEIEDLKEDIL 426 (430)
T ss_dssp CSEEEEECSSHHHHHHHHHHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCSSCHHHHHHHHH
T ss_pred ceEEEEEECCHHHHHHHHHhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHH
Confidence 8 999999988889999999999999999999999999999999999998888889999999999999999999999999
Q ss_pred HHHh
Q 021783 300 KALR 303 (307)
Q Consensus 300 ~~l~ 303 (307)
++|+
T Consensus 427 ~al~ 430 (430)
T 3ri6_A 427 QALC 430 (430)
T ss_dssp HHHC
T ss_pred HhhC
Confidence 9874
No 3
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=100.00 E-value=5.1e-43 Score=307.00 Aligned_cols=303 Identities=45% Similarity=0.738 Sum_probs=274.8
Q ss_pred CcHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhh-cccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 1 MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRV-TPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 1 ~aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~-~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+|+.++++++++||+|+++++.|++....+... ++..|++++.++.+|++++++++++++++|++++|+||+|.+.|+
T Consensus 92 ~~Ai~~~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l 171 (400)
T 3nmy_A 92 MAATSTVMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVDI 171 (400)
T ss_dssp HHHHHHHHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHhccCCCEEEEECCCCCCCeeecH
Confidence 3566556778899999999999998787666655 667899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeE-EEEEcChhHHHHHHHHHHhcCCCCCh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAG-VLAVKGERLAKELYFLQNAEGSGLAP 158 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (307)
++|.++|++||+++|+|++|+.+....+..+|+|+++.|++|+++|+....+| +++.+++.+.+.+.......+...++
T Consensus 172 ~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~ 251 (400)
T 3nmy_A 172 AAIAVIARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGP 251 (400)
T ss_dssp HHHHHHHHHTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCH
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCH
Confidence 99999999999999999999977666667789999999999999877656678 77777777777777777777888889
Q ss_pred hhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-HHHHHHHH
Q 021783 159 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVV 237 (307)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 237 (307)
..+++...+++.+..+++++.++++.+.++|++++.+..+.++++.++|++.++.++.++.|++++|.+++ .+.+..++
T Consensus 252 ~~a~~~l~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~ 331 (400)
T 3nmy_A 252 FDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFC 331 (400)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHH
T ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988888889999999965 45688999
Q ss_pred hcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 238 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 238 ~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
+.++..++.++.|..++++++|...+|..++.+.+.+.|..++.+|+|+|+++.+.+++.|.++|+
T Consensus 332 ~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli~dl~~al~ 397 (400)
T 3nmy_A 332 EKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLERALV 397 (400)
T ss_dssp HHCSSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred HcCCcceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999986
No 4
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=100.00 E-value=4.3e-42 Score=303.96 Aligned_cols=303 Identities=34% Similarity=0.581 Sum_probs=264.9
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCc-eEEEEeCCCCCccccccH
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWT-KLVWVESPTNPRQQICDI 79 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~-~~v~~~~~~n~tG~~~~~ 79 (307)
+|+ .++.+++++||+|+++++.|+++...+...++..|+++++++.+|+++++++++++| ++|++++|+||+|.+.|+
T Consensus 140 ~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tv~lV~le~p~NptG~v~dl 219 (445)
T 1qgn_A 140 CASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFTESPTNPFLRCVDI 219 (445)
T ss_dssp HHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCCCCEEEEeCCCCCCCcccCH
Confidence 355 455567899999999999998887666556788999999999999999999999888 999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++|.++|+++|+++|+|++|+.+....+..+++|+++.|+||+++|+..+++|+++++++ +.+.+.......+...++.
T Consensus 220 ~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~-l~~~l~~~~~~~g~~~~~~ 298 (445)
T 1qgn_A 220 ELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLK-LVSEIRNLHHILGGALNPN 298 (445)
T ss_dssp HHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHH-HHHHHHHHHHHHCCCCCHH
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCcccccccccceEEEEEECHH-HHHHHHHHHHHhCCCCCHH
Confidence 999999999999999999999887666667899999999999997655467999999855 4455555555566667778
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-HHHHHHHHh
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVE 238 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 238 (307)
.+++...+++.+..+++++.++++.+.++|++++.+..+.+++++++|++.+..++.++.+++++|.+++ .+....+++
T Consensus 299 ~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~ 378 (445)
T 1qgn_A 299 AAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVD 378 (445)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHH
Confidence 8888889999999999999999999999999998887888999999999988877766788999999965 345889999
Q ss_pred cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
.++..++.++.|+.+++..+|...+|..++++.+.+.|..++.||+|+|.+|++++++.|.++++++
T Consensus 379 ~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~Edid~li~~L~~al~~~ 445 (445)
T 1qgn_A 379 ALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFDDLKADILQALDSI 445 (445)
T ss_dssp HCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCSSCHHHHHHHHHHHHHHC
T ss_pred hCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 9998999999999999888898888989999999999999999999999999999999999998753
No 5
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=100.00 E-value=2e-41 Score=296.89 Aligned_cols=299 Identities=45% Similarity=0.728 Sum_probs=266.5
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
+|+ .++.+++++||+|++++++|+++...+...++..|++++.++.+|++++++++++++++|++++|+||+|.+.|++
T Consensus 92 ~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~ 171 (392)
T 3qhx_A 92 AAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPTTRLIWVETPTNPLLSIADIA 171 (392)
T ss_dssp HHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCcEEecHH
Confidence 355 4555678999999999999998887776777889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhh
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 160 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (307)
+|.++|++||+++|+|++|+.+....+..+++|+++.|+||+++++.++++|+++.+++.+.+.+.......+...++..
T Consensus 172 ~i~~la~~~g~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~ 251 (392)
T 3qhx_A 172 GIAQLGADSSAKVLVDNTFASPALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFD 251 (392)
T ss_dssp HHHHHHHHHTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHH
T ss_pred HHHHHHHHcCCEEEEECCCcccccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHH
Confidence 99999999999999999999887667777899999999999996655588999999877777777777777777888889
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-HHHHHHHHhc
Q 021783 161 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVET 239 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 239 (307)
+++...+++.+..+++++.++++.+.++|+.++.+..+.++++.++|++.++.++.++.+++++|.+.+ .+....+++.
T Consensus 252 ~~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~ 331 (392)
T 3qhx_A 252 AYLTMRGLKTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAK 331 (392)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHH
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHh
Confidence 999999999999999999999999999999999998999999999999999988888889999999976 5668999999
Q ss_pred CCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 240 TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 240 l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
++..++.++.|+.+++.++|...++..++.+ ..|..++.||+|+|.++++++++.|.++|+
T Consensus 332 l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~---~~g~~~~~iRlSvg~e~~~~~i~~l~~al~ 392 (392)
T 3qhx_A 332 TNIFILAESLGSVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLDDLKQALG 392 (392)
T ss_dssp CSSSEECSCCCCSSCEEECGGGTSCGGGBTT---BCCCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred CCCceECCCCCCCCceeeCcccccccccCHH---HcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 9999999999999998888877777665544 677889999999999999999999999874
No 6
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=100.00 E-value=1.9e-41 Score=302.02 Aligned_cols=306 Identities=85% Similarity=1.279 Sum_probs=261.9
Q ss_pred cHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 021783 2 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 2 aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
+|+.+++.++++||+|++++|.|+++...+...++..|++++.++.+|++++++++++++++|++++|+||||.+.|+++
T Consensus 159 ~al~~~l~~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~ 238 (464)
T 1ibj_A 159 AALSAVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRK 238 (464)
T ss_dssp HHHHHHHTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHH
T ss_pred HHHHHHHHHhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCceEEEEeCCCCCCCEeecHHH
Confidence 35544455789999999999999988876666788899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhH
Q 021783 82 IAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 161 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (307)
|.++|++||+++|+|++|+.|....+..+++|++++|+||+++++.|+++|+++++++.+.+.+.......+...++..+
T Consensus 239 i~~la~~~gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~ 318 (464)
T 1ibj_A 239 ISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDC 318 (464)
T ss_dssp HHHHHHTTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHH
T ss_pred HHHHHHHcCCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHH
Confidence 99999999999999999998765445557899999999999988889899999999766666666665555666777888
Q ss_pred HHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCC
Q 021783 162 WICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK 241 (307)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 241 (307)
+++..+++....++++..+++..+.+++++++.+..+.++++.++|++++..++.++.+++++|.+++.+....+.+.|+
T Consensus 319 ~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~L~ 398 (464)
T 1ibj_A 319 WLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTK 398 (464)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCS
T ss_pred HHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECCHHHHHHHHHhcC
Confidence 88888888888888888899999999999998888999999999999888866555568899999976555667999999
Q ss_pred cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcCCC
Q 021783 242 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGPL 307 (307)
Q Consensus 242 ~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~~~ 307 (307)
..||.++.|...++++.|....+...+.+.+...|..++++|+|++.++++++++.|++++++++.
T Consensus 399 ~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~edi~~li~~L~~al~~~~~ 464 (464)
T 1ibj_A 399 YFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFKTFPL 464 (464)
T ss_dssp SSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCSSCHHHHHHHHHHHHHSCCC
T ss_pred cceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHhhcCC
Confidence 899999999988888888766666555555555677789999999999999999999999998763
No 7
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=100.00 E-value=4.8e-41 Score=295.32 Aligned_cols=303 Identities=44% Similarity=0.769 Sum_probs=264.4
Q ss_pred cHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 021783 2 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 2 aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
+|+.+++.++++||+|+++++.|+++...+...++..|++++.++.+|++++++++++++++|++++|+||||.+.|+++
T Consensus 93 ~ai~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~ 172 (403)
T 3cog_A 93 AATVTITHLLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEG 172 (403)
T ss_dssp HHHHHHHTTSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHH
Confidence 35533333789999999999999988777766778899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcC-CEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhh
Q 021783 82 IAEMAHAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 160 (307)
Q Consensus 82 l~~~~~~~~-~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (307)
|.++|+++| +++|+|++|+.+....+..+++|+++.|+||+++|++++++|+++++++.+.+.+.......+...++..
T Consensus 173 i~~la~~~g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~ 252 (403)
T 3cog_A 173 CAHIVHKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPID 252 (403)
T ss_dssp HHHHHTSSSCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHH
T ss_pred HHHHHHHcCCCEEEEECCCcccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHH
Confidence 999999999 9999999999887554555789999999999998888878999999766676666666555666677888
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-HHHHHHHHhc
Q 021783 161 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVET 239 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 239 (307)
+++...+++.+..+++++.+++..+.+++++++.+.++.+++++++|++++..++.++.+++++|.+++ .+....+++.
T Consensus 253 ~~~~~~~l~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~l~~ 332 (403)
T 3cog_A 253 CYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKN 332 (403)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHH
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCHHHHHHHHHh
Confidence 889888999988899999999999999999999999999999999999998877666678999999853 4567788888
Q ss_pred CCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 021783 240 TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 240 l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 304 (307)
++.....++.|+..++.++|....|...+.+.+...|.+++++|+|++.++.+++++.|.++|++
T Consensus 333 ~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~ 397 (403)
T 3cog_A 333 LKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKA 397 (403)
T ss_dssp CSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred CCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 87777788999999999999888888888888888898899999999999999999999999864
No 8
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=100.00 E-value=3e-41 Score=296.83 Aligned_cols=299 Identities=26% Similarity=0.466 Sum_probs=254.2
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
+|+ .++.+++++||+|+++++.|+++...+...++..|+++++++.+|+++++++++++|++|++++|+||+|.+.|++
T Consensus 108 ~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~tklV~~e~~~NptG~v~dl~ 187 (415)
T 2fq6_A 108 AAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVHDVP 187 (415)
T ss_dssp HHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccCCcEEEEECCCCCCCEeecHH
Confidence 455 4556678999999999999999887777777888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH--cCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCCh
Q 021783 81 KIAEMAHA--HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 158 (307)
Q Consensus 81 ~l~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (307)
+|.++|++ +|+++|+|++|+.+....+..+|+|++++|+||+++++.+..+|+++++++ +.+.+.......+..+++
T Consensus 188 ~I~~la~~~~~g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~-~~~~l~~~~~~~G~~~~~ 266 (415)
T 2fq6_A 188 AIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNAR-CWEQLRENAYLMGQMVDA 266 (415)
T ss_dssp HHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTT-THHHHHHHHHHTTCCCCH
T ss_pred HHHHHHHhhcCCCEEEEECCCcccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCHH-HHHHHHHHHHhcCCCCCH
Confidence 99999999 999999999999876555667899999999999997665566899999876 445555555545666777
Q ss_pred hhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC---HHHHHH
Q 021783 159 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---LALSKH 235 (307)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 235 (307)
..++....+++.+..++++..++++.+.++|++++.+.++.++++..+|+++++.++.++.+++++|.+++ .+.+..
T Consensus 267 ~~a~~~~~~l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~ 346 (415)
T 2fq6_A 267 DTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELAN 346 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHH
Confidence 88888888888889999999999999999999998888888999999999988877666678999999976 566999
Q ss_pred HHhcCCcceeecCCCCccceeec--ccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 236 VVETTKYFSITVSFGSVKSLISM--PCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 236 ~~~~l~~~gi~v~~g~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
+++.++..++.++.|+.+++..+ |...+|.... .+.|..++.||+|+|+++++++++.|.++|+++
T Consensus 347 ~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~----~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~~ 414 (415)
T 2fq6_A 347 YLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQ----GEIDFSGTLIRLHIGLEDVDDLIADLDAGFARI 414 (415)
T ss_dssp HHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTT----CCCCCCSCEEEEECCSSCHHHHHHHHHHHHHTT
T ss_pred HHHhCCcCeEeccCCCCceeEEecCCCccccccch----hhcCCCCCEEEEEecCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999988776 6544432110 135667799999999999999999999999764
No 9
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=100.00 E-value=8.9e-40 Score=286.35 Aligned_cols=304 Identities=40% Similarity=0.700 Sum_probs=260.7
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
+|+ .++.+++++||+|++++++|+++...+...++..|++++.++..|++++++.+++++++|++++|+||+|.+.|++
T Consensus 85 ~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~ 164 (389)
T 3acz_A 85 GAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPNTKMVYLESPANPTCKVSDIK 164 (389)
T ss_dssp HHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCHH
Confidence 345 3444568999999999999998887666667889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhh
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 160 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (307)
+|.++|+++|+++|+|++|+.+....+..+++|+++.|+||+++++.+..+|+++++++.+.+.+.......+...++..
T Consensus 165 ~i~~~~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~ 244 (389)
T 3acz_A 165 GIAVVCHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMD 244 (389)
T ss_dssp HHHHHHHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHH
T ss_pred HHHHHHHHcCCEEEEECCCccccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHH
Confidence 99999999999999999999877554556789999999999997765433599999973455555555554566677788
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcC
Q 021783 161 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT 240 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (307)
++....+++.+..++++..++++.+.+++++++.+..+.++++.++|++.++.++.++.+++++|.+++.+....+++.+
T Consensus 245 ~~~~~~~l~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~l~~~ 324 (389)
T 3acz_A 245 AFLCARGMKTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKSFEAAKKLMEHL 324 (389)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSHHHHHHHHTTC
T ss_pred HHHHHcCccHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECCHHHHHHHHHhC
Confidence 89888999988889999999999999999999989899999999999999887765667899999997655577778777
Q ss_pred CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 241 KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 241 ~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
+.....++.|+..++.++|...+|..++.+.+...|..+++||+|++.++++++++.|.++|+++
T Consensus 325 ~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~al~~~ 389 (389)
T 3acz_A 325 KVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQALELW 389 (389)
T ss_dssp SSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHTCC
T ss_pred CCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 77667778899999999898888888899989999998999999999999999999999999753
No 10
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=2.7e-39 Score=284.47 Aligned_cols=301 Identities=37% Similarity=0.665 Sum_probs=255.3
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
|+ .++.+++++||+|++++|.|+++...+...++..|++++.+|.+|++++++.+++++++|++++|+||||.+.|+++
T Consensus 89 ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~ 168 (404)
T 1e5e_A 89 AIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYFETPANPTLKIIDMER 168 (404)
T ss_dssp HHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCcEEEEECCCCCCCcccCHHH
Confidence 45 45556789999999999999998876665778899999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-cCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCcee-EEEEEcChhHHHHHHHHHHhc-CCCCCh
Q 021783 82 IAEMAHA-HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA-GVLAVKGERLAKELYFLQNAE-GSGLAP 158 (307)
Q Consensus 82 l~~~~~~-~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~-G~~~~~~~~~~~~~~~~~~~~-~~~~~~ 158 (307)
|.++|++ +|+++|+|++|+.+....+..+++|+++.|+||+++++ |.++ |+++++++.+.+.+....... +...++
T Consensus 169 i~~la~~~~~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~~~~~-g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~ 247 (404)
T 1e5e_A 169 VCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGH-TDVVAGLICGKADLLQQIRMVGIKDITGSVISP 247 (404)
T ss_dssp HHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCS-SCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCH
T ss_pred HHHHHHhhcCCEEEEECCCchhhhCCccccCCEEEEEcCccccCCC-CCCeEEEEEECHHHHHHHHHHHHHhCCCCCCCH
Confidence 9999999 99999999999987755455678999999999999654 5565 999998765543444433333 455677
Q ss_pred hhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH-HHHHHHH
Q 021783 159 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVV 237 (307)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 237 (307)
..+++...+++.+..++++..++++.+.+++++++.+..+.++.+.++|++++..++.++.++++.|.+++. +....++
T Consensus 248 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l 327 (404)
T 1e5e_A 248 HDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEGAKKLL 327 (404)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHH
T ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCCHHHHHHHH
Confidence 788888888988888889999999999999999988888899999999999988776566789999998764 4467777
Q ss_pred hcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 021783 238 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 238 ~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 304 (307)
++++....++++|...++.++|....|..++.+.+...|.+++++|+|++.++++++++.|++++++
T Consensus 328 ~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~e~~~~li~~l~~al~~ 394 (404)
T 1e5e_A 328 DNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGIEDADELIADFKQGLDA 394 (404)
T ss_dssp HTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 7777666677889988888988888888888888888888889999999999999999999998864
No 11
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=1.3e-39 Score=285.30 Aligned_cols=301 Identities=41% Similarity=0.693 Sum_probs=254.6
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
.|+ .++. ++++||+|+++.++|++....+...++..|++++.+|.+| +++++++++++++|++++|+||||.++|++
T Consensus 81 ~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-~~l~~~i~~~t~lv~~~~~~nptG~~~~l~ 158 (393)
T 1n8p_A 81 ATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLL-NDLPQLIKENTKLVWIETPTNPTLKVTDIQ 158 (393)
T ss_dssp HHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHH-HHHHHHSCSSEEEEEECSSCTTTCCCCCHH
T ss_pred HHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCCh-HHHHHhcccCceEEEEECCCCCcceecCHH
Confidence 355 4455 7899999999999998777666557788999999999888 999999999999999999999999999999
Q ss_pred HHHHHHHHc----CCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCcee-EEEEEcChhHHHHHHHHHHhcCCC
Q 021783 81 KIAEMAHAH----GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA-GVLAVKGERLAKELYFLQNAEGSG 155 (307)
Q Consensus 81 ~l~~~~~~~----~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~-G~~~~~~~~~~~~~~~~~~~~~~~ 155 (307)
+|.++|+++ |+++|+|++|+.+...++..+++|++++|+||++ |++|.+. |+++++++.+.+.+.......+..
T Consensus 159 ~i~~la~~~~~~~~~~livD~a~~~~~~~~~~~~~~di~~~S~sK~~-g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~ 237 (393)
T 1n8p_A 159 KVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYI-NGHSDVVLGVLATNNKPLYERLQFLQNAIGAI 237 (393)
T ss_dssp HHHHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTT-TCSSCCCCEEEEESCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHhCCCCCCEEEEeCCccccccCCHHHcCCeEEEEECcccc-cCCCCceeEEEEeCCHHHHHHHHHHHHhcCCC
Confidence 999999999 9999999999977655666678999999999999 5567665 999987565666665555545556
Q ss_pred CChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCC-ccEEecCCCCCCCchHHHhhhccC-C-CceEEEEeCC-HH
Q 021783 156 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR-VKKVNYAGLPEHPGHELHYSQAKG-A-GSVLSFLTGS-LA 231 (307)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~-~~ 231 (307)
.++..++....+++.+..++++..++++.+.++|++++. +..+.++++.+.|++.++.+..++ . +++++|.+++ .+
T Consensus 238 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~ 317 (393)
T 1n8p_A 238 PSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAE 317 (393)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHH
T ss_pred CCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHH
Confidence 677777877788888888999999999999999998876 777778988888888887665444 5 7899999964 45
Q ss_pred HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 232 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 232 ~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
....+++.++..++.++.|+.+++..+|....|..++.+++.+.|..++.||+|+|.++++++++.|.++|+++
T Consensus 318 ~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 318 AASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp HHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 68899999999999999999998888888888888887788888988999999999999999999999998753
No 12
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=100.00 E-value=3.8e-39 Score=283.31 Aligned_cols=303 Identities=37% Similarity=0.629 Sum_probs=247.6
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
|+ .++.+++++||+|++++++|+++...+...++..|++++.++.+|++++++.+++++++|++++|+||||.+.|+++
T Consensus 92 a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~ 171 (398)
T 1gc0_A 92 AITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHMADIAG 171 (398)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCcccccHHH
Confidence 44 45556789999999999999998877766668889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh-cCCCCChhh
Q 021783 82 IAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EGSGLAPFD 160 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 160 (307)
|.++|+++|+++|+|++|+.+....+..+++|+++.|+||+++++.+..+|+++++++.+.+.+...... .+...++..
T Consensus 172 i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (398)
T 1gc0_A 172 VAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHD 251 (398)
T ss_dssp HHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHH
T ss_pred HHHHHHHcCCEEEEECCCcccccCCchhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHH
Confidence 9999999999999999999776555556789999999999997665444599999866555445444444 456677788
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH-HHHHHHHhc
Q 021783 161 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVET 239 (307)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 239 (307)
++....+++.+..+.++..++++.+.++|++++.+..+.++++.++|+++++.++.++.+++++|.+.+. +....+++.
T Consensus 252 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~ 331 (398)
T 1gc0_A 252 AALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAGRRFMNA 331 (398)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETTHHHHHHHHHHH
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCCHHHHHHHHHh
Confidence 8888888998888999999999999999999988888889999999999888766556789999999753 457888888
Q ss_pred CCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 240 TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 240 l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
++..++.+++|+..++.++|...+|...+.+++...|.+++++|+|++.++++++++.|.++|+++
T Consensus 332 ~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 332 LQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp CSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 888888889999999999998888888999999999999999999999999999999999998753
No 13
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=100.00 E-value=2.9e-38 Score=277.72 Aligned_cols=302 Identities=38% Similarity=0.686 Sum_probs=257.0
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
|+ .++.+++++||+|++++|+|+++...+...++..|++++.++.+|++++++.+++++++|++++|+||||.+.|+++
T Consensus 91 a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~ 170 (398)
T 2rfv_A 91 AITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVDIET 170 (398)
T ss_dssp HHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEEESSBTTTTBCCCHHH
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHH
Confidence 44 45556789999999999999998876655567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCcee-EEEEEcChhHHHHHHHHHHhc-CCCCChh
Q 021783 82 IAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA-GVLAVKGERLAKELYFLQNAE-GSGLAPF 159 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~-G~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 159 (307)
|.++|++||+++|+|++|+.+....+..++.|+++.|+||+++++ |.+. |+++++++.+.+.+....... +...++.
T Consensus 171 i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~-g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (398)
T 2rfv_A 171 VAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGH-GDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPF 249 (398)
T ss_dssp HHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCS-SCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHH
T ss_pred HHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCC-CCceEEEEEECHHHHHHHHHHHHHhCCCCCCCHH
Confidence 999999999999999999988766556678999999999999664 5454 999998765543454444444 5566777
Q ss_pred hHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH-HHHHHHHh
Q 021783 160 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVE 238 (307)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 238 (307)
.++....+++.+..++++..++++.+.+++++++.+..+.++++.++|++++..++.++.+++++|.+++. +....+++
T Consensus 250 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~ 329 (398)
T 2rfv_A 250 NAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMIN 329 (398)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHT
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHHHHHHH
Confidence 88888888888888888899999999999999988888889999999999888765456789999999753 45788999
Q ss_pred cCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 239 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 239 ~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
.++..|+.+++|..+++.++|....|..++.+++...|..++++|+|++.++.+++++.|.++|+++
T Consensus 330 ~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 330 SVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp TCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred hCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 9998999999999988888887777777788888888888999999999999999999999998764
No 14
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=2.8e-37 Score=273.07 Aligned_cols=302 Identities=33% Similarity=0.521 Sum_probs=251.4
Q ss_pred cHH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEe-cCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 2 AAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV-NTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 2 aal-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
.|+ .++.+++++||+|+++.++|+++...+...++..|++++.+ +.+|++++++++++++++|++++++||+|.+.|+
T Consensus 84 ~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l 163 (421)
T 2ctz_A 84 AAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWWVESIGNPALNIPDL 163 (421)
T ss_dssp HHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhccCCeEEEEECCCCCCCcccCH
Confidence 345 45555789999999999999998877766567889999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCcc-CCCCcCCccCCCccEEEeccccccccCCCceeEEEEEc-ChhH-----HHH--------
Q 021783 80 RKIAEMAHAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVK-GERL-----AKE-------- 144 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~-~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~-~~~~-----~~~-------- 144 (307)
++|.++|+++|+++|+|++| +.+....+...++|++++|+||+++++.+..+|+++.+ +..+ ...
T Consensus 164 ~~i~~~a~~~g~~livD~~~~~~g~~~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~ 243 (421)
T 2ctz_A 164 EALAQAAREKGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYH 243 (421)
T ss_dssp HHHHHHHHHHTCEEEEECGGGGGGTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGT
T ss_pred HHHHHHHHHcCCEEEEECCcccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhh
Confidence 99999999999999999999 87764455567899999999999976543334555542 2111 010
Q ss_pred -------------HHH----HHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCC
Q 021783 145 -------------LYF----LQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 207 (307)
Q Consensus 145 -------------~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~ 207 (307)
... .....+..+.+..+++...+++.+..+.+++.++++.+.++|++++.+..+.++++...|
T Consensus 244 g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~ 323 (421)
T 2ctz_A 244 GLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHP 323 (421)
T ss_dssp TBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCT
T ss_pred hhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCC
Confidence 000 112244567778888988999999888999999999999999999988777789988888
Q ss_pred chHHHhhhc-cCCCceEEEEeCCH-HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEE
Q 021783 208 GHELHYSQA-KGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 285 (307)
Q Consensus 208 ~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis 285 (307)
++.++.++. ++.+++++|.+.+. +....+++.++..++.++.|+..++..+|...+|..++.+.+...|..++.||+|
T Consensus 324 ~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS 403 (421)
T 2ctz_A 324 HHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLS 403 (421)
T ss_dssp THHHHHHHHTTCCCSEEEEEETTHHHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEE
T ss_pred CHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEE
Confidence 888876654 56789999999763 5688999999999999999999998888888899999988889999999999999
Q ss_pred eccCChHHHHHHHHHHHh
Q 021783 286 VGIEDVNDLISDLDKALR 303 (307)
Q Consensus 286 ~~~~~~~~~i~~l~~~l~ 303 (307)
++.+|++++++.|.++|+
T Consensus 404 ~g~e~~~~li~~l~~al~ 421 (421)
T 2ctz_A 404 VGLEHVEDLKAELKEALA 421 (421)
T ss_dssp CCSSCHHHHHHHHHHHTC
T ss_pred eCCCCHHHHHHHHHHHhC
Confidence 999999999999999874
No 15
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=1e-36 Score=266.87 Aligned_cols=301 Identities=41% Similarity=0.612 Sum_probs=247.5
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
|+ .++..++++||+|+++.++|++....+...++..|++++.++.+|++++++.+++++++|++++++||||.+.|+++
T Consensus 79 a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~ 158 (386)
T 1cs1_A 79 AIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAK 158 (386)
T ss_dssp HHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHH
T ss_pred HHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhccCCcEEEEeCCCCCCCcccCHHH
Confidence 44 44555689999999999999887766656668899999999999999999999889999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhH
Q 021783 82 IAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 161 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (307)
|.++|++||+++|+|++|+.+.......+++|++++|+||+++++.+..+|+++++++.+.+.+.......+...++..+
T Consensus 159 i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 238 (386)
T 1cs1_A 159 ICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDS 238 (386)
T ss_dssp HHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHH
T ss_pred HHHHHHHcCCEEEEECCCcccccCCccccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHH
Confidence 99999999999999999998776545567899999999999976654335999998755655555554444555666777
Q ss_pred HHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCC
Q 021783 162 WICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK 241 (307)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 241 (307)
+....+++.+..+.+...++.+.+.+++++++.+..+.++.+.++|++++..+..++.++++.|.+.+. ...+.+.+.
T Consensus 239 ~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ 316 (386)
T 1cs1_A 239 YLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD--EQTLRRFLG 316 (386)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSC--HHHHHHHHH
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCC--HHHHHHHHH
Confidence 777777887888888899999999999999888877888999999999888766566789999998643 344555555
Q ss_pred cceeecC---CCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 242 YFSITVS---FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 242 ~~gi~v~---~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
..||.++ +|...++.+.|....+...+.+.+...|..++++|+|++.++++++++.|.++|+++
T Consensus 317 ~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 317 GLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp TCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred hCCcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 6778776 677777778887777777788888888888899999999999999999999998754
No 16
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=100.00 E-value=9.6e-36 Score=262.72 Aligned_cols=300 Identities=33% Similarity=0.552 Sum_probs=242.2
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
|+ .++.+++++||+|++++++|+++...+...++..|++++.++.+ ++++++.+++++++|++++++||+|.+.|+++
T Consensus 83 a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~ 161 (412)
T 2cb1_A 83 ATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPE-PEAVREALSAKTRAVFVETVANPALLVPDLEA 161 (412)
T ss_dssp HHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSS-HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-HHHHHHHhccCCeEEEEeCCCCCCcccccHHH
Confidence 44 45556789999999999999888877766678899999999975 99999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCccCCC-CcCCccCCCccEEEeccccccccCCCceeEEEEEcCh---------------------
Q 021783 82 IAEMAHAHGALLLVDNSIMSP-VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------------------- 139 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~~~~-~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~--------------------- 139 (307)
|.++|++||+++|+|++|+.+ ....+...+.|++++|+||+++++.+..+|+++.++.
T Consensus 162 i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (412)
T 2cb1_A 162 LATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWE 241 (412)
T ss_dssp HHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HH
T ss_pred HHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhh
Confidence 999999999999999999987 4345556789999999999997665434555555533
Q ss_pred -----hHHHHHHHHH-HhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 140 -----RLAKELYFLQ-NAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 140 -----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
.+.+.+.... ...+..+.+..+++...+++.+..+.++..++.+.+.+.|.+.+.+..+..++...+|++.++.
T Consensus 242 ~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~ 321 (412)
T 2cb1_A 242 ALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNAR 321 (412)
T ss_dssp HHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHH
T ss_pred ccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHH
Confidence 1222222222 2234455677888888889888888888889999999999998888778888888889998888
Q ss_pred hhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHH
Q 021783 214 SQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVND 293 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~ 293 (307)
+..++.+++++|.+++.+....+++.++... ..+.|...++..+|....|..++.+.+.+.|..++.||+|++.+++++
T Consensus 322 ~~~~~~~~iv~~~~~~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~ 400 (412)
T 2cb1_A 322 KYLASGGPILTLDLGDLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLD 400 (412)
T ss_dssp HHCSSSCSEEEEECSSHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHH
T ss_pred HhCCCCceEEEEEeCCHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHH
Confidence 7776778999999944444566666665544 556677778778887778888888889999999999999999999999
Q ss_pred HHHHHHHHHhc
Q 021783 294 LISDLDKALRT 304 (307)
Q Consensus 294 ~i~~l~~~l~~ 304 (307)
+++.|.++|++
T Consensus 401 ~i~~l~~al~~ 411 (412)
T 2cb1_A 401 LLALFEEALEA 411 (412)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99999999975
No 17
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=100.00 E-value=9.4e-37 Score=261.69 Aligned_cols=299 Identities=39% Similarity=0.654 Sum_probs=239.5
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
|+ .++.+++++||+|++++++|+++...+...++..|++++.++..|++++++.+++++++|++++++||||.+.|+++
T Consensus 25 a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~ 104 (331)
T 1pff_A 25 AIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLKPNTRIVYFETPANPTLKVIDIED 104 (331)
T ss_dssp HHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhcCCCeEEEEECCCCCcCcccCHHH
Confidence 44 44455789999999999999988766655456789999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-cCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCce-eEEEEEcChhHHHHHHHHHHh-cCCCCCh
Q 021783 82 IAEMAHA-HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM-AGVLAVKGERLAKELYFLQNA-EGSGLAP 158 (307)
Q Consensus 82 l~~~~~~-~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~-~G~~~~~~~~~~~~~~~~~~~-~~~~~~~ 158 (307)
|.++|++ +|+++|+|++|+.+....+..+++|++++|+||+++++ |.+ +|+++++++.+.+.+...... .+...++
T Consensus 105 i~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~~~-~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~ 183 (331)
T 1pff_A 105 AVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYINGH-TDVVAGLVCSRADIIAKVKSQGIKDITGAIISP 183 (331)
T ss_dssp HHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTSSS-SSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCH
T ss_pred HHHHHhhhcCCEEEEECCCcccccCChhhcCCcEEEEECccccCCC-CCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCH
Confidence 9999999 99999999999977654344678999999999999665 445 799999863454444443333 3445566
Q ss_pred hhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHh
Q 021783 159 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVE 238 (307)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (307)
..++.+..+++.+..+.+...++...+.+++++++.+..+.++.+.+.|+++++.+..++.+++++|.+.+.+ .+.+
T Consensus 184 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 260 (331)
T 1pff_A 184 HDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDGLE---KAKK 260 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHH---HHHH
T ss_pred HHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHH---HHHH
Confidence 6677766677767777888888999999999988877788889999999988887665567889999987443 3444
Q ss_pred cCCccee---ecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 239 TTKYFSI---TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 239 ~l~~~gi---~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
.+...|| .++.|+..++..+|....+..++...+...|.+++++|+|++.++++++++.|.++|+++
T Consensus 261 ~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 261 VLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp HHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred HHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 4545566 556777777777776666767777777888888899999999999999999999999764
No 18
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.96 E-value=2.6e-29 Score=218.94 Aligned_cols=257 Identities=16% Similarity=0.147 Sum_probs=186.0
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.++.+ |++++++++++++++|++++|+||||
T Consensus 93 a~~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG 168 (375)
T 3op7_A 93 ANLLVLYSLIEPGDHVISLYPTYQQLY----DIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTG 168 (375)
T ss_dssp HHHHHHHHHCCTTCEEEEEESSCTHHH----HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTC
T ss_pred HHHHHHHHhcCCCCEEEEeCCCchhHH----HHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCC
Confidence 44 455667899999999999998887 5567789999998864 89999999999999999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC----CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 147 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~ 147 (307)
.++| +++|.++|++||+++|+|++|+..... .....+.+++++|+||++ +.+|+++|+++++ +.+.+.+..
T Consensus 169 ~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~v~~~-~~l~~~~~~ 246 (375)
T 3op7_A 169 AVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTY-SLPGIRIGWVAAN-HQVTDILRD 246 (375)
T ss_dssp CCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEESSSSS-SCGGGCCEEEECC-HHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEEEeEChhhc-CCcccceEEEEeC-HHHHHHHHH
Confidence 9999 999999999999999999999864322 112346789999999999 5678899999995 556665555
Q ss_pred HHHhcCCCCChhhHHHHhhccccHHHH----HHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceE
Q 021783 148 LQNAEGSGLAPFDCWICLRGVKTMALR----VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 223 (307)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 223 (307)
.........+...+..+...++..... .+...++.+.+.+.+++.+.+.. ..+ ..+.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~----------------~~~~~~ 309 (375)
T 3op7_A 247 YRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVSY-IRP----------------AVVSTS 309 (375)
T ss_dssp TGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEE-CCC----------------SSSSCE
T ss_pred HHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCceE-ecC----------------CCeEEE
Confidence 544444455556666665555543322 33335666677777776543311 111 123445
Q ss_pred EEEeCCHHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHH
Q 021783 224 SFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDK 300 (307)
Q Consensus 224 ~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~ 300 (307)
++.++......++.+.+ +++||.+.+|..+. .++++|++++. +++++.++.|.+
T Consensus 310 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----------------------~~~~iRi~~~~~~~~i~~~l~~l~~ 366 (375)
T 3op7_A 310 FVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFE-----------------------RDGYVRLGFACEQETLIKGLEKLSQ 366 (375)
T ss_dssp EEEECCSSCHHHHHHHHHHHHCEECEEGGGGT-----------------------CTTEEEECCCSCHHHHHHHHHHHHH
T ss_pred eEEcCCCCCHHHHHHHHHHhCCEEEeChhhhC-----------------------CCCeEEEEecCCHHHHHHHHHHHHH
Confidence 55554333356676666 67899988776532 14679999986 578888888888
Q ss_pred HHhcC
Q 021783 301 ALRTG 305 (307)
Q Consensus 301 ~l~~~ 305 (307)
+++++
T Consensus 367 ~l~~~ 371 (375)
T 3op7_A 367 FLRRF 371 (375)
T ss_dssp HHGGG
T ss_pred HHHHH
Confidence 88764
No 19
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.96 E-value=2.8e-28 Score=213.24 Aligned_cols=239 Identities=19% Similarity=0.201 Sum_probs=166.7
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.++++|||+|++++|+|+++. ..++..|++++.++.+ |++++++++++++++|++++|+||||
T Consensus 103 al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG 178 (385)
T 1b5p_A 103 ALFNLFQAILDPGDEVIVLSPYWVSYP----EMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTG 178 (385)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTHHH----HHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTC
T ss_pred HHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCC
Confidence 45 455567899999999999998877 5567789999999873 68899999988899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCc----CCccCC--CccEEEeccccccccCCCceeEEEEEcChhHHHHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVL----SRPLEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 145 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~----~~~~~~--~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~ 145 (307)
.+++ +++|+++|++||+++|+|++|+.... .....+ +.+++++|+||++ |++|+|+|+++++++ +.+.+
T Consensus 179 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~-~~~G~RiG~~~~~~~-~~~~l 256 (385)
T 1b5p_A 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAF-AMTGWRIGYACGPKE-VIKAM 256 (385)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTT-TCGGGCCEEEECCHH-HHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhc-CCcccceEEEEeCHH-HHHHH
Confidence 9976 89999999999999999999985432 122222 6789999999999 667999999999754 55555
Q ss_pred HHHHHhcCCCCChhhHHHHhhcccc-------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 146 YFLQNAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
...........+...+..+...++. ++...+.+.++.+.+.+.|++. ++ .-. . ..
T Consensus 257 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~--------~~~--------~-~~ 318 (385)
T 1b5p_A 257 ASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GL--------KAV--------R-PS 318 (385)
T ss_dssp HHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TC--------CBC--------C-CS
T ss_pred HHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CC--------eec--------C-CC
Confidence 5444443334455555544444432 2333444455555666666543 11 100 0 11
Q ss_pred CCceEEEEeCC-HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 219 AGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 219 ~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
.+.++++.+.. ..+..++.+.|..+||.++.|..|. . ++++|||++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~----------------------~-~~~iRis~~~ 366 (385)
T 1b5p_A 319 GAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFA----------------------A-FGHVRLSYAT 366 (385)
T ss_dssp BTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGT----------------------C-TTEEEEECCS
T ss_pred eeEEEEEecCCCCCCHHHHHHHHHHCCeEEecccccC----------------------C-CCeEEEEecC
Confidence 23445556641 1136677777778899998887632 1 4579999984
No 20
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.96 E-value=4.7e-28 Score=210.65 Aligned_cols=252 Identities=13% Similarity=0.168 Sum_probs=180.4
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.++ .|++++++.+++++++|++++|+||||.+++.+
T Consensus 101 a~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~- 174 (370)
T 2z61_A 101 GLFFALSSIIDDGDEVLIQNPCYPCYK----NFIRFLGAKPVFCD-FTVESLEEALSDKTKAIIINSPSNPLGEVIDRE- 174 (370)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCTHHH----HHHHHTTCEEEEEC-SSHHHHHHHCCSSEEEEEEESSCTTTCCCCCHH-
T ss_pred HHHHHHHHhcCCCCEEEEeCCCchhHH----HHHHHcCCEEEEeC-CCHHHHHHhcccCceEEEEcCCCCCcCcccCHH-
Confidence 44 445557899999999999999887 55677899999999 799999999988899999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCccCCCCcC----Ccc----CCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcC
Q 021783 82 IAEMAHAHGALLLVDNSIMSPVLS----RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 153 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~~~~~~~----~~~----~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~ 153 (307)
|.++|++||+++|+|++|+.+... ... ..+.|++++|+||++ |++|+|+|++++++ .+.+.+........
T Consensus 175 l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~-~~~~~~~~~~~~~~ 252 (370)
T 2z61_A 175 IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLY-AMTGWRIGYVISND-EIIEAILKLQQNLF 252 (370)
T ss_dssp HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTT-TCGGGCCEEEECCH-HHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhcc-CCccceEEEEEECH-HHHHHHHHHHhhcc
Confidence 999999999999999999865431 222 237899999999999 66789999999986 45555555544444
Q ss_pred CCCChhhHHHHhhcccc-H----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC
Q 021783 154 SGLAPFDCWICLRGVKT-M----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 228 (307)
Q Consensus 154 ~~~~~~~~~~~~~~l~~-~----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (307)
...+...+..+...++. . +...+...++.+.+.+.|++. ++. . . . ...+.++++.++
T Consensus 253 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~---~-----~--------~-~~~~~~~~~~~~ 314 (370)
T 2z61_A 253 ISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWE---V-----N--------N-PIGAYYVFPNIG 314 (370)
T ss_dssp SSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCB---C-----C--------C-CCBTTEECCBCS
T ss_pred cCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCe---e-----c--------C-CCcceEEEEecC
Confidence 45566666666666654 2 223444455566666666643 110 0 0 0 112344555665
Q ss_pred CHHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHh
Q 021783 229 SLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 303 (307)
Q Consensus 229 ~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~ 303 (307)
. +...+.+.|. .+||.++.|..|.. ..++++|+|++. +++++.++.|.++++
T Consensus 315 ~--~~~~~~~~l~~~~gi~v~~g~~f~~---------------------~~~~~~Ri~~~~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 315 E--DGREFAYKLLKEKFVALTPGIGFGS---------------------KGKNYIRISYANSYENIKEGLERIKEFLN 369 (370)
T ss_dssp S--CHHHHHHHHHHHHCEECEEGGGGCG---------------------GGSSBEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred C--CHHHHHHHHHHhCCEEEeCchhhCC---------------------CCCCEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 4 3667778776 68999988765321 025679999984 455666666666654
No 21
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.96 E-value=9.3e-28 Score=210.16 Aligned_cols=260 Identities=18% Similarity=0.169 Sum_probs=185.7
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--------CChHHHHhhcC-CCceEEEEeCCCCC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIG-PWTKLVWVESPTNP 72 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--------~d~~~l~~~l~-~~~~~v~~~~~~n~ 72 (307)
|+ .++.+++++||+|+++.|+|.++. ..++..|++++.++. .|+++++++++ +++++|++++|+||
T Consensus 97 a~~~~~~~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~np 172 (391)
T 3dzz_A 97 AISAMVRQFTSPGDQILVQEPVYNMFY----SVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNP 172 (391)
T ss_dssp HHHHHHHHHSCTTCEEEECSSCCHHHH----HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTT
T ss_pred HHHHHHHHhCCCCCeEEECCCCcHHHH----HHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCC
Confidence 45 455567899999999999998887 556778999999987 48999999998 79999999999999
Q ss_pred cccc---ccHHHHHHHHHHcCCEEEEeCccCCCCc-----CCccCC-----CccEEEeccccccccCCCceeEEEEEcCh
Q 021783 73 RQQI---CDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLEL-----GADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 73 tG~~---~~~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~~~~-----~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
||.+ .++++|.++|++||+++|+|++|+.... ...... +.+++++|+||++ |.+|+++|+++++++
T Consensus 173 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~-g~~G~r~G~~~~~~~ 251 (391)
T 3dzz_A 173 IGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTF-NLAALHAACAIIPNP 251 (391)
T ss_dssp TTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHH-TCTTTCCEEEECCSH
T ss_pred CCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhc-cccchhheEEEECCH
Confidence 9999 4699999999999999999999984322 122222 2349999999999 667889999999866
Q ss_pred hHHHHHHHHHHh-cCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhc-CCCccEEecCCCCCCCchHHHh
Q 021783 140 RLAKELYFLQNA-EGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 140 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
.+.+.+...... .....+...+..+...++. ++...+...++.+.+.+.+++ .+++. +..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~------------- 317 (391)
T 3dzz_A 252 DLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVK-VLD------------- 317 (391)
T ss_dssp HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECC-------------
T ss_pred HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-Eec-------------
Confidence 666666555432 2233444444444444332 444556666777777777776 44331 111
Q ss_pred hhccCCCceEEEEeCCH-HHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--C
Q 021783 214 SQAKGAGSVLSFLTGSL-ALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--E 289 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~~-~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~ 289 (307)
...+.++++.++.. .....+.+.| +++||.++.|..|.. ..++++|+|++. +
T Consensus 318 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------------------~~~~~iRis~~~~~~ 373 (391)
T 3dzz_A 318 ---SNASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRG---------------------NGHEFVRINLACPKE 373 (391)
T ss_dssp ---CCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCT---------------------TGGGEEEEECCSCHH
T ss_pred ---cCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCC---------------------CCCCEEEEEecCCHH
Confidence 11234455666532 2367788888 478999998876331 125679999985 6
Q ss_pred ChHHHHHHHHHHHhcC
Q 021783 290 DVNDLISDLDKALRTG 305 (307)
Q Consensus 290 ~~~~~i~~l~~~l~~~ 305 (307)
++++.++.|.++++++
T Consensus 374 ~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 374 LVIDGMQRLKQGVLNL 389 (391)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 7788888888888765
No 22
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.96 E-value=2.7e-28 Score=211.59 Aligned_cols=248 Identities=17% Similarity=0.238 Sum_probs=180.3
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCcccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQI 76 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 76 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.++.+ |++++++.+++++++|++++|+||||.+
T Consensus 96 a~~~~~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~ 171 (363)
T 3ffh_A 96 LIELLTRVLLDTTTNTVMATPTFVQYR----QNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNY 171 (363)
T ss_dssp HHHHHHHHHCSTTCEEEEEESSCHHHH----HHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHHHHccCCCEEEEcCCChHHHH----HHHHHcCCEEEEecCCCCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCC
Confidence 44 445567899999999999998877 5567789999999987 9999999999999999999999999999
Q ss_pred ccHHHHHHHHHHc--CCEEEEeCccCCCC-------cCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH
Q 021783 77 CDIRKIAEMAHAH--GALLLVDNSIMSPV-------LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 147 (307)
Q Consensus 77 ~~~~~l~~~~~~~--~~~li~D~a~~~~~-------~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~ 147 (307)
+|.+++.++++.+ |+++|+|++|+... .......+.+++++|+||++ |++|+|+|+++++++ +.+.+..
T Consensus 172 ~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~-~~~~l~~ 249 (363)
T 3ffh_A 172 IELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIY-GLASARVGYGIADKE-IIRQLNI 249 (363)
T ss_dssp CCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTT-CCSSCCCEEEEECHH-HHHHHHH
T ss_pred cCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhh-cCchhceeeeecCHH-HHHHHHH
Confidence 9999999999888 99999999998322 11222346779999999999 677989999999644 4444433
Q ss_pred HHHhcCCCCChhhHHHHhhccc---cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 148 LQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
... ....+...++.+...++ .+....+...++.+.+.+.+++..++. + . +..+++++
T Consensus 250 ~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~----------------~~~~~~~~ 309 (363)
T 3ffh_A 250 VRP--PFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVK-L-Y----------------PANGNFVL 309 (363)
T ss_dssp TCC--SCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCE-E-C----------------CCCSSEEE
T ss_pred hCC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCce-E-C----------------CCCCeEEE
Confidence 322 23445555555555553 334455666667777777777643321 1 1 11356778
Q ss_pred EEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHH
Q 021783 225 FLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKA 301 (307)
Q Consensus 225 ~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~ 301 (307)
+.++. +...+.+.|..+||.++.|..+. .++++|+|++. ++++++++.|+++
T Consensus 310 ~~~~~--~~~~~~~~l~~~gi~v~~g~~~~-----------------------~~~~iRis~~~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 310 IDLGI--EAGTIFSYLEKNGYITRSGAALG-----------------------FPTAVRITIGKEEDNSAVIALLEKL 362 (363)
T ss_dssp EECSS--CHHHHHHHHHHTTEECEETTTTT-----------------------CTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred EECCC--CHHHHHHHHHHCCeEEEeCccCC-----------------------CCCeEEEECCCHHHHHHHHHHHHHh
Confidence 88864 36778888888899998877522 15679999984 4566666666554
No 23
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.96 E-value=1.4e-27 Score=209.51 Aligned_cols=255 Identities=15% Similarity=0.136 Sum_probs=185.6
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCC------CceEEEEeCCCCCcccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~ 78 (307)
.++.+++++||+|+++.|+|+++. ..++..|++++.++..|++++++.+++ ++++|++++++||||.+.|
T Consensus 118 ~~l~~~~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~ 193 (399)
T 3tqx_A 118 GLFETLLGPEDAIISDELNHASII----DGIRLCKAQRYRYKNNAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD 193 (399)
T ss_dssp TTHHHHCCTTCEEEEETTCCHHHH----HHHHSCCSEEEEECTTCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC
T ss_pred HHHHHhcCCCCEEEECCcccHHHH----HHHHHcCCceeEeCCCCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC
Confidence 455567899999999999999887 567788999999999999999998874 8999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcC-C----cc----CCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH-
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLS-R----PL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL- 148 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~-~----~~----~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~- 148 (307)
+++|.++|++||+++|+|++|+.+... . .. ..+.|++++|+||+++|++ +|+++++++ +.+.+...
T Consensus 194 l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~---gG~~~~~~~-~~~~~~~~~ 269 (399)
T 3tqx_A 194 LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGAS---GGYTSGHKE-IIEWLRNRS 269 (399)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSC---CEEEEECHH-HHHHHHHHC
T ss_pred HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCc---eEEEEcCHH-HHHHHHHhC
Confidence 999999999999999999999765432 1 11 1257999999999996455 599998865 44444332
Q ss_pred HHh-cCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceE
Q 021783 149 QNA-EGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 223 (307)
Q Consensus 149 ~~~-~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 223 (307)
... ..+..++.........++. .....+...++.+.+.+.|++.. +.-. ...++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~~~----------~~~~~~~ 330 (399)
T 3tqx_A 270 RPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKLG---------FQLV----------PGNHPII 330 (399)
T ss_dssp HHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT---------CCBC----------CCSSSEE
T ss_pred cceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC---------CCcC----------CCCCCEE
Confidence 222 2334555554444444443 34445556666667777776531 1100 1246788
Q ss_pred EEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHH
Q 021783 224 SFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLD 299 (307)
Q Consensus 224 ~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~ 299 (307)
++.+++......+.+.|..+||.++.+.... ....++++|++++. +++++.++.|.
T Consensus 331 ~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~--------------------~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 390 (399)
T 3tqx_A 331 PVMLGDAQLATNMADHLLQEGIYVVGFSYPV--------------------VPMGKARIRVQMSAVHTQQQLDRAIEAFG 390 (399)
T ss_dssp EEEEECHHHHHHHHHHHHHTTEECCEECTTT--------------------SCTTCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHHHHHCCCEEeeeCCCC--------------------CCCCCceEEEEeecCCCHHHHHHHHHHHH
Confidence 8888776668888888888899887543211 01135689999973 78888888888
Q ss_pred HHHhcCC
Q 021783 300 KALRTGP 306 (307)
Q Consensus 300 ~~l~~~~ 306 (307)
+++++++
T Consensus 391 ~~~~~~~ 397 (399)
T 3tqx_A 391 QVGKKLG 397 (399)
T ss_dssp HHHHHTT
T ss_pred HHHHHhc
Confidence 8888765
No 24
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.96 E-value=1.4e-28 Score=213.50 Aligned_cols=248 Identities=13% Similarity=0.201 Sum_probs=181.5
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-----CChHHHHhhcCCCceEEEEeCCCCCcccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAIGPWTKLVWVESPTNPRQQI 76 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 76 (307)
|+ .++.+++++||+|+++.|+|.++. ..++..|++++.++. .|++++++++++++++|++++|+||||.+
T Consensus 94 a~~~~~~~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~ 169 (365)
T 3get_A 94 VIEFAIHSKLNSKNAFLQAGVTFAMYE----IYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGEC 169 (365)
T ss_dssp HHHHHHHHHCCTTCEEEECSSCCTHHH----HHHHHHTCEEEECSSSSCCHHHHHHHHHHTTTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHHHHhCCCCEEEEeCCChHHHH----HHHHHcCCEEEEEecCCCCCCCHHHHHHHhCCCCCEEEEcCCCCCCCCC
Confidence 45 455567899999999999998887 556778999999997 46889999999999999999999999999
Q ss_pred ccHHHHHHHHH--HcCCEEEEeCccCCCC------c-CC----ccCCCccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 77 CDIRKIAEMAH--AHGALLLVDNSIMSPV------L-SR----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 77 ~~~~~l~~~~~--~~~~~li~D~a~~~~~------~-~~----~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
+|.+++.++++ ++|+++|+|++|+... . .. ....+.+++++|+||++ |.+|+++|+++++ +.+.+
T Consensus 170 ~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~ 247 (365)
T 3get_A 170 LDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLY-GLGGLRIGYGIAN-ANIIS 247 (365)
T ss_dssp CCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTT-SCTTTCCEEEEEC-HHHHH
T ss_pred cCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHh-cCcchheEEEEcC-HHHHH
Confidence 99888888888 6799999999997222 1 11 12346889999999999 6678899999996 44555
Q ss_pred HHHHHHHhcCCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCC
Q 021783 144 ELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 220 (307)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 220 (307)
.+...... ...+...+..+...++. +....+...++.+.+.+.+++. ++ .+ . ...+
T Consensus 248 ~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~-~~-~----------------~~~~ 306 (365)
T 3get_A 248 AFYKLRAP--FNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NI-KI-I----------------DSYT 306 (365)
T ss_dssp HHHHHSCT--TCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TC-EE-C----------------CCSS
T ss_pred HHHHhcCC--CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CC-EE-C----------------CCCC
Confidence 44443322 23455555555555543 4455566667777777777765 22 11 1 1135
Q ss_pred ceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHH
Q 021783 221 SVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLD 299 (307)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~ 299 (307)
+++++.+++. ....+.+.|..+||.++.|..+ + ++++|+|++. ++++++++.|+
T Consensus 307 ~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~----------------------~--~~~iRis~~~~~~i~~l~~~l~ 361 (365)
T 3get_A 307 NFITYFFDEK-NSTDLSEKLLKKGIIIRNLKSY----------------------G--LNAIRITIGTSYENEKFFTEFD 361 (365)
T ss_dssp SEEEEECSSS-CHHHHHHHHHTTTEECEECGGG----------------------T--CSEEEEECCCHHHHHHHHHHHH
T ss_pred eEEEEECCCC-CHHHHHHHHHHCCEEEEECccC----------------------C--CCEEEEEcCCHHHHHHHHHHHH
Confidence 6778888654 4778888888889999887652 2 4579999985 57777777777
Q ss_pred HHH
Q 021783 300 KAL 302 (307)
Q Consensus 300 ~~l 302 (307)
+++
T Consensus 362 ~~l 364 (365)
T 3get_A 362 KIL 364 (365)
T ss_dssp HHH
T ss_pred HHh
Confidence 665
No 25
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.96 E-value=6.1e-28 Score=212.48 Aligned_cols=259 Identities=17% Similarity=0.128 Sum_probs=186.1
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-----------CChHHHHhhcCCCceEEEEeCCC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----------CDLDEVASAIGPWTKLVWVESPT 70 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----------~d~~~l~~~l~~~~~~v~~~~~~ 70 (307)
|+ .++.+++++||+|+++.|+|.++. ..++..|++++.++. .|++++++.+++++++|++++|+
T Consensus 114 a~~~~~~~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~ 189 (407)
T 3nra_A 114 ALFLAVAATVARGDKVAIVQPDYFANR----KLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPN 189 (407)
T ss_dssp HHHHHHHTTCCTTCEEEEEESCCTHHH----HHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSC
T ss_pred HHHHHHHHhCCCCCEEEEcCCcccchH----HHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCC
Confidence 44 445567899999999999998877 667788999999987 18999999998889999999999
Q ss_pred CCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----Cc-----cCCCccEEEeccccccccCCCceeEEEEEc
Q 021783 71 NPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RP-----LELGADIVMHSATKFIAGHSDVMAGVLAVK 137 (307)
Q Consensus 71 n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~-----~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~ 137 (307)
||||.+++ +++|+++|++||+++|+|++|+.+... .. ...+.+++++|+||++ |.+|+++|+++++
T Consensus 190 nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~ 268 (407)
T 3nra_A 190 NPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTE-SLSGYRLGVAFGS 268 (407)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTT-CCGGGCCEEEEEC
T ss_pred CCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCccccc-CCCeeeEEEEEcC
Confidence 99999998 999999999999999999999853221 11 2356789999999999 6678899999987
Q ss_pred ChhHHHHHHHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 138 GERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
+ .+.+.+...........+...+..+...++. +....++..++.+.+.+.+++.+.+.. .
T Consensus 269 ~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--------~------- 332 (407)
T 3nra_A 269 R-AIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFA--------R------- 332 (407)
T ss_dssp H-HHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBC--------C-------
T ss_pred H-HHHHHHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCcee--------c-------
Confidence 4 4555555555444444455555555554432 455566667777778877776532211 0
Q ss_pred hhccCCCceEEEEeCC-HHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--C
Q 021783 214 SQAKGAGSVLSFLTGS-LALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--E 289 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~ 289 (307)
. ...+.++++.++. ......+.+.|. .+||.++.|..+.. ..++++|||++. +
T Consensus 333 -~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------------------~~~~~iRis~~~~~~ 389 (407)
T 3nra_A 333 -T-PQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFSP---------------------HTADSVRLNFSQDHE 389 (407)
T ss_dssp -C-CSBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTCT---------------------TCTTBEEEECCSCHH
T ss_pred -c-CCeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhCC---------------------CCCCEEEEEeCCCHH
Confidence 0 1123555566643 223667777775 45999988776331 135789999986 5
Q ss_pred ChHHHHHHHHHHHhcC
Q 021783 290 DVNDLISDLDKALRTG 305 (307)
Q Consensus 290 ~~~~~i~~l~~~l~~~ 305 (307)
++++.++.|.++++++
T Consensus 390 ~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 390 AAVAAARRIVTLVERY 405 (407)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6777788888777653
No 26
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.96 E-value=2.1e-27 Score=210.36 Aligned_cols=261 Identities=14% Similarity=0.147 Sum_probs=178.4
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcC------------CCceEEE
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIG------------PWTKLVW 65 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~------------~~~~~v~ 65 (307)
|+ .++.++++|||+|++++|+|+++. ..++..|++++.++.+ |++++++.++ +++++|+
T Consensus 120 al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~ 195 (425)
T 2r2n_A 120 GLCKVFEMIINPGDNVLLDEPAYSGTL----QSLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLY 195 (425)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCHHHH----HHHGGGTCEEEEECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEE
T ss_pred HHHHHHHHhCCCCCEEEEeCCCcHHHH----HHHHHcCCEEEEeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEE
Confidence 45 455567899999999999998887 5567889999999873 7899999886 4688887
Q ss_pred E-eCCCCCcccccc---HHHHHHHHHHcCCEEEEeCccCC----CCc-C---CccCCCccEEEeccccccccCCCceeEE
Q 021783 66 V-ESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS----PVL-S---RPLELGADIVMHSATKFIAGHSDVMAGV 133 (307)
Q Consensus 66 ~-~~~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~----~~~-~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~ 133 (307)
+ ++++||||.+++ +++|+++|++||+++|+|++|+. +.. . .....+.+++++|+||++ + +|+|+||
T Consensus 196 ~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~-~-~GlRiG~ 273 (425)
T 2r2n_A 196 TVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKII-S-SGLRIGF 273 (425)
T ss_dssp ECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTT-C-STTCCEE
T ss_pred ECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhc-c-CccceEE
Confidence 6 589999999997 55999999999999999999973 211 1 122345789999999999 5 7999999
Q ss_pred EEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhcccc---------HHHHHHHHHHHHHHHHHHHhcC-CCccEEecCCC
Q 021783 134 LAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---------MALRVEKQQDNAQKIAEFLASH-PRVKKVNYAGL 203 (307)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~l 203 (307)
++++++ +.+.+...........+...+..+...++. +....+.+.++.+.+.+.+++. +++..+..
T Consensus 274 ~~~~~~-l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--- 349 (425)
T 2r2n_A 274 LTGPKP-LIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHV--- 349 (425)
T ss_dssp EEEEHH-HHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECC---
T ss_pred EecCHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeC---
Confidence 999855 555555555444445555555555555443 1222233344555555556542 22211111
Q ss_pred CCCCchHHHhhhccCCCceEEEEeCCHHHHHH-HHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeE
Q 021783 204 PEHPGHELHYSQAKGAGSVLSFLTGSLALSKH-VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 282 (307)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i 282 (307)
...+.++++.+++..+... +.+.+.++||.+++|..|... ....++++
T Consensus 350 -------------p~~g~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~------------------~~~~~~~i 398 (425)
T 2r2n_A 350 -------------PAAGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYVD------------------SSAPSPYL 398 (425)
T ss_dssp -------------CSBSSEEEEEETTCSCCHHHHHTHHHHTTEECEEGGGGSSS------------------TTSCCCEE
T ss_pred -------------CCceEEEEEEeCCCCCHHHHHHHHHHHCCcEEechhhhcCC------------------CCCCCCEE
Confidence 1246677888864222333 567777889999888764310 01135789
Q ss_pred EEEecc---CChHHHHHHHHHHHhc
Q 021783 283 RISVGI---EDVNDLISDLDKALRT 304 (307)
Q Consensus 283 Ris~~~---~~~~~~i~~l~~~l~~ 304 (307)
|||++. +++++.++.|.+++++
T Consensus 399 Ris~~~~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 399 RASFSSASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp EEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 999973 6788888888887754
No 27
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.96 E-value=1.4e-27 Score=209.12 Aligned_cols=252 Identities=19% Similarity=0.205 Sum_probs=179.6
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.+|.+ |++++++.+++++++|++++|+||||
T Consensus 113 al~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG 188 (389)
T 1o4s_A 113 ALFNAFMALLDPGDEVIVFSPVWVSYI----PQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTG 188 (389)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTC
T ss_pred HHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCC
Confidence 44 445557899999999999999887 5567789999999864 78999999988899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC----CccC----CCccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~----~~~~----~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
.+++ +++|.++|+++|+++|+|++|+.+... .... .+.|++++|+||++ |++|+|+|+++++++ +.+
T Consensus 189 ~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~l~~~~~-~~~ 266 (389)
T 1o4s_A 189 VVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSH-SMTGWRVGYLISSEK-VAT 266 (389)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTT-TCGGGCCEEEECCHH-HHH
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhc-CCcccceEEEEeCHH-HHH
Confidence 9987 999999999999999999999865431 1111 47899999999999 667899999999754 555
Q ss_pred HHHHHHHhcCCCCChhhHHHHhhcccc-HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCce
Q 021783 144 ELYFLQNAEGSGLAPFDCWICLRGVKT-MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 222 (307)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 222 (307)
.+...........+...+..+...++. +....+...++.+.+.+.|++. ++ .-. . ...+.+
T Consensus 267 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~l~~~L~~~-g~--------~~~--------~-~~~~~~ 328 (389)
T 1o4s_A 267 AVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKM-GV--------KFV--------E-PEGAFY 328 (389)
T ss_dssp HHHHHHHHHTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT-TC--------CCC--------C-CSBSSE
T ss_pred HHHHHhhhcccCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc-CC--------eee--------c-CCcceE
Confidence 555444433344455555555444432 3444566667777777777654 11 100 0 112445
Q ss_pred EEEEeCCHHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHH
Q 021783 223 LSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLD 299 (307)
Q Consensus 223 ~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~ 299 (307)
+++.++ .+..++.+.|. .+||.+++|..|. .++++|+|++. +++++.++.|.
T Consensus 329 ~~~~~~--~~~~~l~~~l~~~~gi~v~~g~~f~-----------------------~~~~~Ris~~~~~~~l~~~l~~l~ 383 (389)
T 1o4s_A 329 LFFKVR--GDDVKFCERLLEEKKVALVPGSAFL-----------------------KPGFVRLSFATSIERLTEALDRIE 383 (389)
T ss_dssp EEEECS--SCHHHHHHHHHHHHCEECEEGGGGT-----------------------CTTEEEEECCSCHHHHHHHHHHHH
T ss_pred EEEeCC--CCHHHHHHHHHHHCCEEEeCchhcC-----------------------CCCeEEEEEeCCHHHHHHHHHHHH
Confidence 566665 23567777775 7899888776522 13579999985 55666666666
Q ss_pred HHHh
Q 021783 300 KALR 303 (307)
Q Consensus 300 ~~l~ 303 (307)
++++
T Consensus 384 ~~l~ 387 (389)
T 1o4s_A 384 DFLN 387 (389)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 6664
No 28
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.96 E-value=3.1e-27 Score=206.45 Aligned_cols=259 Identities=14% Similarity=0.134 Sum_probs=183.7
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-----CChHHHHhhc--CCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAI--GPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l--~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|++.. +...++..|++++.++. .|++++++++ .+++++|++++++||||
T Consensus 83 a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG 160 (386)
T 2dr1_A 83 IMEASIRNGVSKGGKVLVTIIGAFGKR--YKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTG 160 (386)
T ss_dssp HHHHHHHHHSCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTT
T ss_pred HHHHHHHHhhcCCCeEEEEcCCchhHH--HHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcc
Confidence 44 455557899999999999998731 22566778999999987 4899999999 57899999999999999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHH--------
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL-------- 145 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~-------- 145 (307)
.+.|+++|.++|++||+++|+|++|+.+..+ ....+++|++++|+||+++++.| +|+++++++.. +.+
T Consensus 161 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g--~G~~~~~~~~~-~~~~~~~~~~~ 237 (386)
T 2dr1_A 161 VLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPG--LAIGAFSERFL-EIAEKMPERGW 237 (386)
T ss_dssp EECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSS--CEEEEECHHHH-HHHTTCTTCCS
T ss_pred hhCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEeccccccCCCc--eEEEEECHHHH-HHHhcCCCCce
Confidence 9999999999999999999999999977654 55566899999999999977666 89999986533 322
Q ss_pred --------HHHH--HhcCCCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCch
Q 021783 146 --------YFLQ--NAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH 209 (307)
Q Consensus 146 --------~~~~--~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~ 209 (307)
.... .....+.+...+..+..+++. +....++..++.+.+.+.|++. ++. +..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~-------- 307 (386)
T 2dr1_A 238 YFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLD-ILAE-------- 307 (386)
T ss_dssp TTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSC--------
T ss_pred EEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCe-eCcC--------
Confidence 1111 122233444444444444432 3445566667777777777754 221 0000
Q ss_pred HHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-
Q 021783 210 ELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI- 288 (307)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~- 288 (307)
.....+.++++.++......++.+.|..+||.++.|..+. .++++||+++.
T Consensus 308 -----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~-----------------------~~~~iRi~~~~~ 359 (386)
T 2dr1_A 308 -----PGHESPTITAVLTPPGIKGDEVYEAMRKRGFELAKGYGSV-----------------------KEKTFRIGHMGY 359 (386)
T ss_dssp -----TTCBCSSEEEEECCTTCCHHHHHHHHHHTTEECEECCGGG-----------------------TTTEEEEECCSS
T ss_pred -----ccccCCceEEEEcCCCCCHHHHHHHHHHCCeEEecCcccc-----------------------CCCEEEEECCCC
Confidence 0001367888888633346778888887899888766310 24679999984
Q ss_pred ---CChHHHHHHHHHHHhc
Q 021783 289 ---EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 ---~~~~~~i~~l~~~l~~ 304 (307)
++++++++.|.+++++
T Consensus 360 ~~~~~i~~~~~~l~~~~~~ 378 (386)
T 2dr1_A 360 MKFEDIQEMLDNLREVINE 378 (386)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 6777777777777654
No 29
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.96 E-value=1.2e-28 Score=214.87 Aligned_cols=272 Identities=17% Similarity=0.148 Sum_probs=178.7
Q ss_pred HHHHHhc----CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccc
Q 021783 5 AAVTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 5 ~~~~~~~----~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~ 75 (307)
.++.++. ++||+|++++++|+++...+.. ++..|++++.++.+ |++++++.+++++++|++++++||||.
T Consensus 75 ~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~-~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~ 153 (382)
T 4hvk_A 75 LAIIGYAMRNARKGKHILVSAVEHMSVINPAKF-LQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGT 153 (382)
T ss_dssp HHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHH-HHHTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCB
T ss_pred HHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHH-HHhcCCEEEEeccCCCCCcCHHHHHHHhccCceEEEEECCCCCcee
Confidence 3445555 8999999999999988765543 35679999999975 899999999999999999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH----HHH
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF----LQN 150 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~----~~~ 150 (307)
+.|+++|.++|++||+ +|+|++|+.+..+ +....++|++++|+||++ |+.| .|+++++++........ ...
T Consensus 154 ~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~-g~~g--~g~~~~~~~~~~~~~~~~~~~~~~ 229 (382)
T 4hvk_A 154 IQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIGADMLTISSNDIY-GPKG--VGALWIRKEAKLQPVILGGGQENG 229 (382)
T ss_dssp BCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTCSEEEEESGGGT-SCTT--CEEEEEETTCCCCCSSCSSCTGGG
T ss_pred eCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHhc-CCCc--eEEEEEcCccCcCcccccCCCcCc
Confidence 9999999999999999 9999999987765 455568999999999987 6777 78888876531000000 000
Q ss_pred hcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 151 AEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 151 ~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
....+.+.........+++. ++...++..++.+.+.+.|+..+.+ ++..+.....+++++|.
T Consensus 230 ~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--------------~~~~~~~~~~~~~~~~~ 295 (382)
T 4hvk_A 230 LRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEES--------------YLNGHPEKRLPNNVNVR 295 (382)
T ss_dssp TSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTE--------------EECSCSSSBCTTEEEEE
T ss_pred cccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCe--------------EEeCCccccCCCEEEEE
Confidence 11122233333333333332 2333444455555666666544332 11111111224578888
Q ss_pred eCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC----CCeEEEEecc----CChHHHHHHH
Q 021783 227 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGI----EDVNDLISDL 298 (307)
Q Consensus 227 ~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~iRis~~~----~~~~~~i~~l 298 (307)
+.+.+ ...+.+.|..+||.++.|..+.... ..+.......|.. ++++|++++. ++++++++.|
T Consensus 296 ~~~~~-~~~~~~~l~~~gi~v~~g~~~~~~~--------~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l 366 (382)
T 4hvk_A 296 FSYIE-GESIVLSLDMAGIQASTGSACSSKT--------LQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVL 366 (382)
T ss_dssp ETTCC-HHHHHHHHHHTTCBCBCC----------------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHH
T ss_pred ECCCC-HHHHHHHHHHCCEEEeeCCccCCCC--------CcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHH
Confidence 86544 6778888888899999987643211 0112222334443 5889999984 5677777777
Q ss_pred HHHHhc
Q 021783 299 DKALRT 304 (307)
Q Consensus 299 ~~~l~~ 304 (307)
++++++
T Consensus 367 ~~~~~~ 372 (382)
T 4hvk_A 367 PGVIER 372 (382)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776653
No 30
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.96 E-value=2.6e-28 Score=213.06 Aligned_cols=259 Identities=16% Similarity=0.117 Sum_probs=181.9
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC-CceEEEEeCCCCCcccc
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP-WTKLVWVESPTNPRQQI 76 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~-~~~~v~~~~~~n~tG~~ 76 (307)
|+.++.+++++||+|++++++|++. .+...++..|++++.++.+ |++++++.+++ ++++|++++++||||.+
T Consensus 66 al~~~~~~~~~gd~vi~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~ 143 (384)
T 3zrp_A 66 AMESVTSLLKPNDKILVVSNGVFGD--RWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVR 143 (384)
T ss_dssp HHHHGGGGCCTTCEEEEECSSHHHH--HHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEE
T ss_pred HHHHHHhhcCCCCEEEEecCCcchH--HHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceE
Confidence 3344445789999999999998663 2336678899999999975 89999999986 89999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHH-----------
Q 021783 77 CDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE----------- 144 (307)
Q Consensus 77 ~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~----------- 144 (307)
.|+++|.++|++||+++|+|++|+.+..+ +...++.|++++|+||+++|+.| +|+++++++.+...
T Consensus 144 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g--~g~~~~~~~~~~~~~~~~~~~~~~~ 221 (384)
T 3zrp_A 144 EPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALGSAAG--LGLLLLSPKALSILDSQNSIAGYYL 221 (384)
T ss_dssp CCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTCCCSS--EEEEEECHHHHHHHHHCCCSCCSTT
T ss_pred CcHHHHHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCcccccCCCc--eEEEEECHHHHHHhcCCCCCCcccc
Confidence 99999999999999999999999987765 56667899999999999977777 89999986654333
Q ss_pred -HHHHHH---h----cC---CCCChhhHHHHhhcccc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc
Q 021783 145 -LYFLQN---A----EG---SGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 208 (307)
Q Consensus 145 -~~~~~~---~----~~---~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 208 (307)
...... . .. .+.+.........+++. ++...++..++.+.+.+.|++. ++. +..+ .
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~------~ 293 (384)
T 3zrp_A 222 DLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLE-IVAR------R 293 (384)
T ss_dssp CHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSCS------S
T ss_pred cHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCe-EccC------c
Confidence 121111 1 00 12233233333233332 3344555566666777777654 211 0000 0
Q ss_pred hHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 209 HELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
.....+.+++|.+++ .....+.+.|..+||.++.|..+. .+++|++++.
T Consensus 294 ------~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~~~------------------------~~~iRi~~~~ 342 (384)
T 3zrp_A 294 ------PESYSNTVTGVILKV-ADPQKVLAGTVNEGVEFAPGVHPA------------------------FKYFRIGHMG 342 (384)
T ss_dssp ------GGGBCSSEEEEECSS-SCHHHHHHHHHTTTCCCEECCCTT------------------------CCEEEEECCS
T ss_pred ------ccccCccEEEEECCC-CCHHHHHHHHHHCCEEEecCCCCC------------------------cCEEEEeccc
Confidence 011235677888876 347788888888899888766311 1569999873
Q ss_pred ----CChHHHHHHHHHHHhc
Q 021783 289 ----EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 ----~~~~~~i~~l~~~l~~ 304 (307)
++++++++.|.+++++
T Consensus 343 ~~~~e~i~~~~~~l~~~l~~ 362 (384)
T 3zrp_A 343 WVTPNDAIIAISVIERTLRK 362 (384)
T ss_dssp SCCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHH
Confidence 6778888888887764
No 31
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.96 E-value=1.1e-27 Score=209.75 Aligned_cols=260 Identities=16% Similarity=0.183 Sum_probs=182.1
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.++.+ |++++++.+++++++|++++|+||||
T Consensus 99 a~~~~~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG 174 (389)
T 1gd9_A 99 AFLMGLSAFLKDGEEVLIPTPAFVSYA----PAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTG 174 (389)
T ss_dssp HHHHHHTTTCCTTCEEEEEESCCTTHH----HHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred HHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCC
Confidence 45 344456789999999999999887 5566789999998853 78999999988899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----CccC----CCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~~~----~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
.+++ +++|.++|++||+++|+|++|+.+... .... .+.|++++|+||++ +++|+|+|++++++ .+.
T Consensus 175 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~-~~~ 252 (389)
T 1gd9_A 175 AVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTF-AMTGWRLGFVAAPS-WII 252 (389)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTT-TCGGGCCEEEECCH-HHH
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhc-CCcccceEEEEECH-HHH
Confidence 9984 999999999999999999999865431 1222 46799999999999 66788999999984 455
Q ss_pred HHHHHHHHhcCCCCChhhHHHHhhccccH------HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhc
Q 021783 143 KELYFLQNAEGSGLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 216 (307)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 216 (307)
+.+...........+...+..+...++.. +...+...++.+.+.+.|++. ++ .-. .
T Consensus 253 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~--------~~~--------~- 314 (389)
T 1gd9_A 253 ERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-GL--------PTV--------K- 314 (389)
T ss_dssp HHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC--------CCC--------C-
T ss_pred HHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc-CC--------eec--------C-
Confidence 55555444434445555555555555532 233344455566666666653 11 000 0
Q ss_pred cCCCceEEEEeCC-HHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChH
Q 021783 217 KGAGSVLSFLTGS-LALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVN 292 (307)
Q Consensus 217 ~~~~~~~~~~~~~-~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~ 292 (307)
...+.++++.++. ..+..++.+.|. .+||.++.|..|... .++++|+|++. ++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---------------------~~~~iRi~~~~~~~~i~ 373 (389)
T 1gd9_A 315 PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKA---------------------GEGYVRISYATAYEKLE 373 (389)
T ss_dssp CCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGG---------------------GTTBEEEECCSCHHHHH
T ss_pred CCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCC---------------------CCCeEEEEecCCHHHHH
Confidence 1123345555542 123667888876 789998887653210 25679999986 5777
Q ss_pred HHHHHHHHHHhcCCC
Q 021783 293 DLISDLDKALRTGPL 307 (307)
Q Consensus 293 ~~i~~l~~~l~~~~~ 307 (307)
+.++.|.+++++.++
T Consensus 374 ~~l~~l~~~~~~~~~ 388 (389)
T 1gd9_A 374 EAMDRMERVLKERKL 388 (389)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhccC
Confidence 788888888876543
No 32
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.96 E-value=3.9e-27 Score=205.67 Aligned_cols=257 Identities=15% Similarity=0.194 Sum_probs=181.5
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--------CChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--------~d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
|+ .++.+++++||+|+++.|+|.++. ..++..|++++.++. .|++++++.+++++++|++++|+|||
T Consensus 94 a~~~~~~~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~npt 169 (383)
T 3kax_A 94 ALSTSIQAFTKENESVLVQPPIYPPFF----EMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPI 169 (383)
T ss_dssp HHHHHHHHHCCTTCEEEECSSCCHHHH----HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTT
T ss_pred HHHHHHHHhCCCCCEEEEcCCCcHHHH----HHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCC
Confidence 45 455567899999999999998887 556778999999986 38899999998899999999999999
Q ss_pred ccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----CccC-----CCccEEEeccccccccCCCceeEEEEEcChh
Q 021783 74 QQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGER 140 (307)
Q Consensus 74 G~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~~~-----~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~ 140 (307)
|.+++ +++|.++|++||+++|+|++|+..... .... .+.+++++|+||++ +++|+++|+++++++.
T Consensus 170 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~ 248 (383)
T 3kax_A 170 GRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTF-NIAGLQASIIIIPNEK 248 (383)
T ss_dssp TBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHH-TCGGGCCEEEECCCHH
T ss_pred CcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhc-cCcchhheEEEeCCHH
Confidence 99986 667777799999999999999753221 1111 25679999999999 6678899999996666
Q ss_pred HHHHHHHHHHhcC-CCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhc-CCCccEEecCCCCCCCchHHHhh
Q 021783 141 LAKELYFLQNAEG-SGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 141 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~l~~~~~~~~~~~ 214 (307)
+.+.+.......+ .+.+...+..+...++. +....+...++.+.+.+.+++ .+.+ .+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~-------------- 313 (383)
T 3kax_A 249 LRQAFTSIQYRQGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTL-SVMK-------------- 313 (383)
T ss_dssp HHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTC-EECC--------------
T ss_pred HHHHHHHHHhhcccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCc-eEec--------------
Confidence 6666655544433 35555555555555543 344455566677777777765 3332 1111
Q ss_pred hccCCCceEEEEeCCH-HHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CC
Q 021783 215 QAKGAGSVLSFLTGSL-ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--ED 290 (307)
Q Consensus 215 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~ 290 (307)
...+.++++.++.. ....++.+.|. ++||.+++|..+.. ..++++|+|++. ++
T Consensus 314 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------------------~~~~~iRi~~~~~~~~ 370 (383)
T 3kax_A 314 --PEGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGL---------------------GGEEHIGINIGCPRSV 370 (383)
T ss_dssp --CSBSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGCT---------------------TCTTEEEEECSSCHHH
T ss_pred --CCceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhcC---------------------CCCCeEEEEEcCCHHH
Confidence 11233444666532 23677888886 68999998876321 136789999985 45
Q ss_pred hHHHHHHHHHHH
Q 021783 291 VNDLISDLDKAL 302 (307)
Q Consensus 291 ~~~~i~~l~~~l 302 (307)
+++.++.|.+++
T Consensus 371 i~~~l~~l~~~l 382 (383)
T 3kax_A 371 LEEILNRLRHTF 382 (383)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 666666666554
No 33
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.96 E-value=2.9e-27 Score=207.83 Aligned_cols=255 Identities=14% Similarity=0.131 Sum_probs=185.0
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCC------CceEEEEeCCCCCcccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~ 78 (307)
.++.+++++||+|++++|.|+++. ..++..|++++.++..|++++++.+++ ++++|++++++||||.+.+
T Consensus 120 ~~~~~~~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~ 195 (401)
T 1fc4_A 120 GLFETLLGAEDAIISDALNHASII----DGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN 195 (401)
T ss_dssp TTHHHHCCTTCEEEEETTCCHHHH----HHHHTSCSEEEEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC
T ss_pred HHHHHHcCCCCEEEEcchhHHHHH----HHHHHcCCceEEECCCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCC
Confidence 455567899999999999998777 456788999999998899999998864 7999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCc-CC--------ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVL-SR--------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~-~~--------~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
+++|.++|++||+++|+|++|+.+.. .. ....+.|++++|+||+++++. +|+++++++ +.+.+....
T Consensus 196 ~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~---gG~~~~~~~-~~~~l~~~~ 271 (401)
T 1fc4_A 196 LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGAS---GGYTAARKE-VVEWLRQRS 271 (401)
T ss_dssp HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSS---CEEEEECHH-HHHHHHHHC
T ss_pred HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCC---CEEEEcCHH-HHHHHHHhC
Confidence 99999999999999999999975543 11 112257999999999995554 499998744 444444322
Q ss_pred -Hh-cCCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 150 -NA-EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 150 -~~-~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
.. .....+...+..+..+++.+ ....+...++.+.+.+.|++. ++ .-. ...+++++
T Consensus 272 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~--------~~~----------~~~~~~~~ 332 (401)
T 1fc4_A 272 RPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA-GF--------TLA----------GADHAIIP 332 (401)
T ss_dssp HHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TC--------CBC----------CSSSSEEE
T ss_pred cCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CC--------ccc----------CCCCCEEE
Confidence 12 23455556666665555543 345566667777777777754 11 000 12467888
Q ss_pred EEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHH
Q 021783 225 FLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDK 300 (307)
Q Consensus 225 ~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~ 300 (307)
+.+++......+.+.|..+||.++.|..+.. ...++++|++++. ++++++++.|.+
T Consensus 333 ~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~--------------------~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 392 (401)
T 1fc4_A 333 VMLGDAVVAQKFARELQKEGIYVTGFFYPVV--------------------PKGQARIRTQMSAAHTPEQITRAVEAFTR 392 (401)
T ss_dssp EEEECHHHHHHHHHHHHHTTEECCEECTTSS--------------------CTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred EEcCChHHHHHHHHHHHHCCcEEeeecCCCC--------------------CCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 8887654577888888888998887654210 0124679999983 677888888888
Q ss_pred HHhcCC
Q 021783 301 ALRTGP 306 (307)
Q Consensus 301 ~l~~~~ 306 (307)
++++++
T Consensus 393 ~~~~~~ 398 (401)
T 1fc4_A 393 IGKQLG 398 (401)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 877654
No 34
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.96 E-value=4.9e-27 Score=206.15 Aligned_cols=255 Identities=15% Similarity=0.121 Sum_probs=182.2
Q ss_pred HH-HHHHHhcCCC-CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~g-d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++| |+|++++|+|+++. ..++..|++++.+|.+ |++++++.+++++++|++++|+||||
T Consensus 111 al~~~~~~l~~~g~d~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG 186 (398)
T 3ele_A 111 SLSICFRALTSDAYDEFITIAPYFPEYK----VFVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSG 186 (398)
T ss_dssp HHHHHHHHHCCSTTCEEEEESSCCTHHH----HHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTTC
T ss_pred HHHHHHHHHcCCCCCEEEEeCCCchhhH----HHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCCC
Confidence 44 4555678999 99999999998887 5567789999999875 88999999998999999999999999
Q ss_pred cccc---HHHHHHHHHH------cCCEEEEeCccCCCC-----cC-CccCCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 75 QICD---IRKIAEMAHA------HGALLLVDNSIMSPV-----LS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~------~~~~li~D~a~~~~~-----~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
.+++ +++|+++|++ ||+++|+|++|+... .+ .....+.+++++|+||++ |.+|+|+|+++++++
T Consensus 187 ~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~ 265 (398)
T 3ele_A 187 TVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSL-SLPGERIGYVLVPDE 265 (398)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTS-SCTTTCCEEEECCTT
T ss_pred CCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcC-CCccceeEEEEEcch
Confidence 9997 7778899999 999999999998532 12 223456889999999999 667899999999876
Q ss_pred hH-----HHHHHHHHHhc-CCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 140 RL-----AKELYFLQNAE-GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 140 ~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
.. ...+....... ....+...+..+...++... ..+.+.++.+.+.+.|++. ++ .+..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~l~~~L~~~-g~-~~~~------------- 329 (398)
T 3ele_A 266 VYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG-DINAYKENRDLLYEGLTRI-GY-HCFK------------- 329 (398)
T ss_dssp STTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-CHHHHHHHHHHHHHHHHHH-TC-CEEC-------------
T ss_pred hhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHHc-CC-eecC-------------
Confidence 32 22232233222 23344455555555554321 2345566667777777653 11 1111
Q ss_pred hhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CCh
Q 021783 214 SQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDV 291 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~ 291 (307)
...+.++++.+++.+ ...+.+.+..+||.+++|..|. .++++|||++. +++
T Consensus 330 ---~~~~~~~~~~~~~~~-~~~~~~~l~~~gi~v~~g~~~~-----------------------~~~~iRis~~~~~e~i 382 (398)
T 3ele_A 330 ---PDGAFYMFVKALEDD-SNAFCEKAKEEDVLIVAADGFG-----------------------CPGWVRISYCVDREMI 382 (398)
T ss_dssp ---CSBSSEEEEECSSSC-HHHHHHHHHTTTEECEESGGGT-----------------------CTTEEEEECCSCHHHH
T ss_pred ---CCeeEEEEEEcCCCC-HHHHHHHHHHCCEEEeCccccC-----------------------CCCeEEEEecCCHHHH
Confidence 112444777776443 6778888888899998887632 14579999975 677
Q ss_pred HHHHHHHHHHHhcC
Q 021783 292 NDLISDLDKALRTG 305 (307)
Q Consensus 292 ~~~i~~l~~~l~~~ 305 (307)
++.++.|.++++++
T Consensus 383 ~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 383 KHSMPAFEKIYKKY 396 (398)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 88888888887653
No 35
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.96 E-value=7.5e-28 Score=208.08 Aligned_cols=250 Identities=13% Similarity=0.173 Sum_probs=183.3
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC--CCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG--PWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~--~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|+++.|+|+++. ..++..|++++.++.+ |++++++.++ +++++|++++|+||||
T Consensus 80 a~~~~~~~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG 155 (354)
T 3ly1_A 80 GIRAAIEAYASLEAQLVIPELTYGDGE----HFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTG 155 (354)
T ss_dssp HHHHHHHHHCCTTCEEEEESSSCTHHH----HHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTC
T ss_pred HHHHHHHHHhCCCCeEEECCCCchHHH----HHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcC
Confidence 45 445567899999999999999887 5667889999999987 8999999998 7999999999999999
Q ss_pred ccccHHHHHHHHHH--cCCEEEEeCccCCCCcC----C----ccCC-CccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 75 QICDIRKIAEMAHA--HGALLLVDNSIMSPVLS----R----PLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 75 ~~~~~~~l~~~~~~--~~~~li~D~a~~~~~~~----~----~~~~-~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
.+++.+++.++++. +|+++|+|++|+..... . .... +.+++++|+||++ |.+|+++|++++++ .+.+
T Consensus 156 ~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~-~~~~ 233 (354)
T 3ly1_A 156 TITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIH-AMAGMRVGYAVAHP-TVIA 233 (354)
T ss_dssp CCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTT-CCGGGCCEEEECCH-HHHH
T ss_pred CCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhc-cChhhhheeeecCH-HHHH
Confidence 99998888888887 99999999999743321 1 1223 6789999999999 66788999999864 4444
Q ss_pred HHHHHHHhcCCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCC
Q 021783 144 ELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 220 (307)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 220 (307)
.+...... ...+...+..+...++. +....+...++.+.+.+.+++. ++ ... +..+
T Consensus 234 ~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~--------~~~----------~~~~ 292 (354)
T 3ly1_A 234 LMGRYVAG--EKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KL--------PYL----------PSEG 292 (354)
T ss_dssp HHGGGTTC--SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TC--------CBC----------CCCS
T ss_pred HHHHhcCC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CC--------eEC----------CCCc
Confidence 44333222 34455555555555553 3444555666667777777653 11 111 1136
Q ss_pred ceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHH
Q 021783 221 SVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLD 299 (307)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~ 299 (307)
.++++.++. ....+.+.|..+||.++ |..+. .++++|||++. ++++++++.|.
T Consensus 293 ~~~~~~~~~--~~~~~~~~l~~~gi~v~-g~~~~-----------------------~~~~iRis~~~~~~i~~~~~~l~ 346 (354)
T 3ly1_A 293 NFVFHQLVV--PLKDYQTHMADAGVLIG-RAFPP-----------------------ADNWCRISLGTPQEMQWVADTMR 346 (354)
T ss_dssp SEEEEECSS--CHHHHHHHHHHTTEECC-CCCTT-----------------------CTTEEEEECCCHHHHHHHHHHHH
T ss_pred eEEEEECCC--CHHHHHHHHHHCCEEEe-ecCCC-----------------------CCCEEEEEcCCHHHHHHHHHHHH
Confidence 677888865 36677788888899988 65411 35779999986 68888888888
Q ss_pred HHHhcC
Q 021783 300 KALRTG 305 (307)
Q Consensus 300 ~~l~~~ 305 (307)
+++++.
T Consensus 347 ~~l~~~ 352 (354)
T 3ly1_A 347 EFRKKS 352 (354)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 888753
No 36
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.96 E-value=1.7e-27 Score=208.44 Aligned_cols=259 Identities=17% Similarity=0.139 Sum_probs=183.7
Q ss_pred HH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 3 AL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 3 al-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
|+ .++.++ +++||+|++++|+|+++...+...++..|++++.++.+ |++++++.+++++++|++++++|||
T Consensus 88 a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~npt 167 (390)
T 1elu_A 88 GCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNT 167 (390)
T ss_dssp HHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTT
T ss_pred HHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCC
Confidence 44 445556 78999999999999988766655667789999999873 6899999999899999999999999
Q ss_pred cccccHHHHHHHHH----HcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH
Q 021783 74 QQICDIRKIAEMAH----AHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 148 (307)
Q Consensus 74 G~~~~~~~l~~~~~----~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~ 148 (307)
|.+.|+++|.++|+ ++|+++|+|++|+.+..+ +....+.|++++|+||++.++.| +|+++++++.... +...
T Consensus 168 G~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~-~~~~ 244 (390)
T 1elu_A 168 GQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAG--VGGLYIHGDCLGE-INPT 244 (390)
T ss_dssp CCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTT--CEEEEECTTTGGG-CCCC
T ss_pred ceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEccccccccCCCc--eEEEEECHHhHhh-cCCc
Confidence 99999999999999 999999999999977654 44456799999999997767766 8999998654322 2110
Q ss_pred ----------------------HHhcCCCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcCCCccEEec
Q 021783 149 ----------------------QNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNY 200 (307)
Q Consensus 149 ----------------------~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 200 (307)
......+.+.........+++. +....++..++.+.+.+.|++.+++ .+..
T Consensus 245 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~ 323 (390)
T 1elu_A 245 YVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHV-HCLA 323 (390)
T ss_dssp SCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTE-EESC
T ss_pred cccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCc-EEec
Confidence 0111122232322322223321 4445666677777788888765432 1111
Q ss_pred CCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCC
Q 021783 201 AGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTED 280 (307)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 280 (307)
+. ++.++++.|.++......++.+.|..+||.++.|. .++
T Consensus 324 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~--------------------------~~~ 363 (390)
T 1elu_A 324 TS--------------APQAGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA--------------------------DPD 363 (390)
T ss_dssp SS--------------CCSSSEEEEEECSSSCHHHHHHHHHHTTEECEEET--------------------------TTT
T ss_pred Cc--------------cccccEEEEEcCCCCCHHHHHHHHHHCCEEEEecC--------------------------CCC
Confidence 10 12467888888532236678888877899877643 145
Q ss_pred eEEEEeccCChHHHHHHHHHHHhcC
Q 021783 281 LVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 281 ~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
++|||++....++.++.+.+.|+++
T Consensus 364 ~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 364 CIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred eEEEecccCCCHHHHHHHHHHHHhh
Confidence 6999998767777777777777654
No 37
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.96 E-value=3.7e-27 Score=206.98 Aligned_cols=258 Identities=15% Similarity=0.154 Sum_probs=181.2
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--------CChHHHHhhcC-CCceEEEEeCCCCC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIG-PWTKLVWVESPTNP 72 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--------~d~~~l~~~l~-~~~~~v~~~~~~n~ 72 (307)
|+ .++.+++++||+|+++.|+|+++. ..++..|++++.+|. .|+++++++++ +++++|++++|+||
T Consensus 101 a~~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~np 176 (399)
T 1c7n_A 101 AVFNAVREFTKPGDGVIIITPVYYPFF----MAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNP 176 (399)
T ss_dssp HHHHHHHHHCCTTCEEEECSSCCTHHH----HHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTT
T ss_pred HHHHHHHHhcCCCCEEEEcCCCcHhHH----HHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCC
Confidence 45 455567899999999999999887 556678999999886 37899999998 78999999999999
Q ss_pred cccccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----CCccC-----CCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 73 RQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 73 tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~~~-----~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
||.+++ +++|.++|++||+++|+|++|+.... ..... .+.+++++|+||++ +++|+|+|+++++++
T Consensus 177 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~ 255 (399)
T 1c7n_A 177 VGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTF-NIAGMGMSNIIIKNP 255 (399)
T ss_dssp TTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHH-TCGGGCCEEEECCCH
T ss_pred CCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhc-cccchheEEEEECCH
Confidence 999998 99999999999999999999985322 12221 35679999999999 667889999999866
Q ss_pred hHHHHHHHHHHhcC-CCCChhhHHHHhhccc----cHHHHHHHHHHHHHHHHHHHhc-CCCccEEecCCCCCCCchHHHh
Q 021783 140 RLAKELYFLQNAEG-SGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 140 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
.+.+.+.......+ .+.+...+..+...++ .++...+...++.+.+.+.|++ .+++. -.
T Consensus 256 ~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--------~~------- 320 (399)
T 1c7n_A 256 DIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIK--------AP------- 320 (399)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSB--------CC-------
T ss_pred HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCe--------Ee-------
Confidence 56555555444332 2345555554444442 2333444555666677777765 33221 01
Q ss_pred hhccCCCc-eEEEEeCCH-HHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--
Q 021783 214 SQAKGAGS-VLSFLTGSL-ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-- 288 (307)
Q Consensus 214 ~~~~~~~~-~~~~~~~~~-~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-- 288 (307)
+..++ ++++.++.. .....+.+.|. .+||.+++|..|.. ..++++|||++.
T Consensus 321 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------------------~~~~~iRis~~~~~ 376 (399)
T 1c7n_A 321 ---LIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGD---------------------GGIGFERINLAAPS 376 (399)
T ss_dssp ---CCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCG---------------------GGTTEEEEECCSCH
T ss_pred ---cCCceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccCC---------------------CCCCeEEEEeccCH
Confidence 11233 445677532 23667888885 68999888765321 025679999986
Q ss_pred CChHHHHHHHHHHHhc
Q 021783 289 EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 ~~~~~~i~~l~~~l~~ 304 (307)
+++++.++.|.+++++
T Consensus 377 ~~l~~~l~~l~~~l~~ 392 (399)
T 1c7n_A 377 SVIQESLERLNKALKD 392 (399)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5677777777777654
No 38
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.95 E-value=3.2e-28 Score=214.86 Aligned_cols=261 Identities=14% Similarity=0.099 Sum_probs=182.6
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC-CCceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG-PWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~-~~~~~v~~~~~~n~tG~ 75 (307)
|+ .++.++++|||+|++++++|++.. +...++..|++++.++.+ |+++++++++ +++++|++++++||||.
T Consensus 74 al~~~~~~l~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~ 151 (416)
T 3isl_A 74 GIEAVLASVIEPEDDVLIPIYGRFGYL--LTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGR 151 (416)
T ss_dssp HHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTE
T ss_pred HHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCce
Confidence 44 455667899999999999997632 235677889999999985 8999999998 68999999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH-----
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ----- 149 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~----- 149 (307)
+.|+++|.++|++||+++|+|++|+.+..+ +...+++|++++|+||+++++.| +|+++++++.. +.+....
T Consensus 152 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g--~g~~~~~~~~~-~~~~~~~~~~~G 228 (416)
T 3isl_A 152 IHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLSVPSG--MAPITYNERVA-DVIAARKKVERG 228 (416)
T ss_dssp ECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCCCSS--EEEEEECHHHH-HHHHTC------
T ss_pred ecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCccccCCCCC--eEEEEECHHHH-HHhhcccccccc
Confidence 999999999999999999999999987765 56667899999999999778877 89999986543 3332110
Q ss_pred ---------------------------H---h---cCCCCChhhHHHHhhcccc-----HHHHHHHHHHHHHHHHHHHhc
Q 021783 150 ---------------------------N---A---EGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLAS 191 (307)
Q Consensus 150 ---------------------------~---~---~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~ 191 (307)
. . ...+.+.........+++. ++...++..++.+.+.+.|++
T Consensus 229 w~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 308 (416)
T 3isl_A 229 IATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKA 308 (416)
T ss_dssp ------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0112222222333233322 334455556666666766665
Q ss_pred CCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHH
Q 021783 192 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVE 270 (307)
Q Consensus 192 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~ 270 (307)
. ++ . +..+.....+.++++.++......++.+.|..+ ||.++.|..
T Consensus 309 ~-g~--------~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~------------------ 355 (416)
T 3isl_A 309 M-GL--------R------LFGDDSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIASSFG------------------ 355 (416)
T ss_dssp T-TC--------C------BCSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCS------------------
T ss_pred c-CC--------E------eccCccccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEecCCC------------------
Confidence 3 11 1 000011113568888885333477888888766 999887652
Q ss_pred HHHhcCCCCCeEEEEecc----CC-hHHHHHHHHHHHhcCC
Q 021783 271 VRQARGLTEDLVRISVGI----ED-VNDLISDLDKALRTGP 306 (307)
Q Consensus 271 ~~~~~~~~~~~iRis~~~----~~-~~~~i~~l~~~l~~~~ 306 (307)
...++++|++++. ++ ++++++.|+++++++.
T Consensus 356 -----~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 356 -----PLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp -----TTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred -----CCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 1135789999932 45 8888999988887653
No 39
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.95 E-value=2.2e-27 Score=207.74 Aligned_cols=256 Identities=13% Similarity=0.145 Sum_probs=179.9
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC---------ChHHHHhhcCCCceEEEEeCCCCC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---------DLDEVASAIGPWTKLVWVESPTNP 72 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---------d~~~l~~~l~~~~~~v~~~~~~n~ 72 (307)
|+ .++.+++++||+|+++.|+|.++. ..++..|++++.++.+ |++++++++++ ++++++++|+||
T Consensus 102 a~~~~~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~np 176 (391)
T 4dq6_A 102 AISLLINELTKANDKIMIQEPVYSPFN----SVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNP 176 (391)
T ss_dssp HHHHHHHHHSCTTCEEEECSSCCTHHH----HHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTT
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCHHHH----HHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCC
Confidence 44 455567899999999999999887 5567789999999875 88999999988 999999999999
Q ss_pred ccccc---cHHHHHHHHHHcCCEEEEeCccCCCCcC-----CccCC-----CccEEEeccccccccCCCceeEEEEEcCh
Q 021783 73 RQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLEL-----GADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 73 tG~~~---~~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~~~~-----~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
||.++ ++++|.++|++||+++|+|++|+..... ..... +.+++++|+||++ |.+|+++|+++++++
T Consensus 177 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~ 255 (391)
T 4dq6_A 177 VGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTF-NIAGLQSSYVVLPDE 255 (391)
T ss_dssp TTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHH-TCGGGCCEEEECCSH
T ss_pred CCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhc-cCcccceEEEEeCCH
Confidence 99995 5889999999999999999999753321 22222 4559999999999 667889999999875
Q ss_pred hHHHHHHHHHHhc-CCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhc-CCCccEEecCCCCCCCchHHHh
Q 021783 140 RLAKELYFLQNAE-GSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 140 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
.+.+.+....... ..+.+...+..+...++. +....+...++.+.+.+.+++ .+.+. +..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~------------- 321 (391)
T 4dq6_A 256 KDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLK-VRK------------- 321 (391)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECC-------------
T ss_pred HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-ecC-------------
Confidence 6666665554333 334555555444444432 344455566667777777765 33321 110
Q ss_pred hhccCCCceEEEEeCC-HHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--C
Q 021783 214 SQAKGAGSVLSFLTGS-LALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--E 289 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~ 289 (307)
...+.++++.++. ......+.+.|..+ ||.+++|..|.. ..++++|+|++. +
T Consensus 322 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------------------~~~~~iRis~~~~~~ 377 (391)
T 4dq6_A 322 ---PEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGI---------------------GGSGYQRINLACPRS 377 (391)
T ss_dssp ---CSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCT---------------------TCTTEEEEECCSCHH
T ss_pred ---CCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCC---------------------CCCCeEEEEEcCCHH
Confidence 1123344566653 12367788888777 999988775321 135789999985 5
Q ss_pred ChHHHHHHHHHHH
Q 021783 290 DVNDLISDLDKAL 302 (307)
Q Consensus 290 ~~~~~i~~l~~~l 302 (307)
++++.++.|.+++
T Consensus 378 ~i~~~l~~l~~~l 390 (391)
T 4dq6_A 378 MLEEALIRIKNAI 390 (391)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 5666666666655
No 40
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.95 E-value=4.4e-28 Score=210.56 Aligned_cols=250 Identities=16% Similarity=0.209 Sum_probs=181.6
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC-CceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP-WTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~-~~~~v~~~~~~n~tG~ 75 (307)
|+ .++.+++++||+|+++.|+|.++. ..++..|++++.++.+ |++++++++++ ++++|++++|+||||.
T Consensus 97 a~~~~~~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~ 172 (367)
T 3euc_A 97 IISMLALAAARPGAKVMAPVPGFVMYA----MSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGN 172 (367)
T ss_dssp HHHHHHHHTCCTTCEEEEEESCSCCSC----HHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCC
T ss_pred HHHHHHHHHcCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCC
Confidence 45 445567899999999999999888 5567889999999864 89999999987 8999999999999999
Q ss_pred ccc---HHHHHHHHHHc--CCEEEEeCccCCCC----cCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH
Q 021783 76 ICD---IRKIAEMAHAH--GALLLVDNSIMSPV----LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 146 (307)
Q Consensus 76 ~~~---~~~l~~~~~~~--~~~li~D~a~~~~~----~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~ 146 (307)
+++ +++|+++|++| |+++|+|++|+... .+.....+.+++++|+||+ +.+|+++|+++++++ +.+.+.
T Consensus 173 ~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~--~~~G~r~G~~~~~~~-~~~~~~ 249 (367)
T 3euc_A 173 LFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL--GLAGIRLGYVAGDPQ-WLEQLD 249 (367)
T ss_dssp CCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT--TSCSCCEEEEEECHH-HHHHHG
T ss_pred CCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh--cccccCceeeeeCHH-HHHHHH
Confidence 974 78888889999 99999999997432 2233445678999999999 467889999999744 433333
Q ss_pred HHHHhcCCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceE
Q 021783 147 FLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 223 (307)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 223 (307)
.... ....+...+..+...++. +....+...++.+.+.+.+++.+++. + . ...+.++
T Consensus 250 ~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~----------------~~~~~~~ 309 (367)
T 3euc_A 250 KVRP--PYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVT-V-F----------------PSAANFL 309 (367)
T ss_dssp GGCC--SSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCE-E-C----------------CCSSSEE
T ss_pred HhCC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-C----------------CCCCeEE
Confidence 2221 223455555555555544 34455566667777777777654331 1 1 1135677
Q ss_pred EEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHH
Q 021783 224 SFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKAL 302 (307)
Q Consensus 224 ~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l 302 (307)
++.++ ....+.+.|..+||.++.|..+. +..++++|+|++. ++++++++.|++++
T Consensus 310 ~~~~~---~~~~l~~~l~~~gi~v~~~~~~~---------------------~~~~~~iRis~~~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 310 LARVP---DAAQTFDRLLARKVLIKNVSKMH---------------------PLLANCLRVTVSTPEENAQFLEAFAASL 365 (367)
T ss_dssp EEECS---CHHHHHHHHHTTTEECEECGGGC---------------------GGGTTEEEEECCCHHHHHHHHHHHHHHT
T ss_pred EEECC---CHHHHHHHHHHCCeEEEECCccC---------------------CCCCCEEEEecCCHHHHHHHHHHHHHHh
Confidence 78776 36677888888999998876532 1135789999985 67777888777766
Q ss_pred h
Q 021783 303 R 303 (307)
Q Consensus 303 ~ 303 (307)
+
T Consensus 366 ~ 366 (367)
T 3euc_A 366 Q 366 (367)
T ss_dssp C
T ss_pred c
Confidence 4
No 41
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.95 E-value=2.3e-27 Score=207.60 Aligned_cols=256 Identities=15% Similarity=0.172 Sum_probs=178.9
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.++.+ |++++++.+++++++|++++|+||||
T Consensus 102 a~~~~~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG 177 (388)
T 1j32_A 102 SIFNLMLAMIEPGDEVIIPAPFWVSYP----EMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTG 177 (388)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCTHHH----HHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred HHHHHHHHhcCCCCEEEEcCCCChhHH----HHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCC
Confidence 44 455557899999999999998877 5566789999999863 78999999998899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----CccC-----CCccEEEeccccccccCCCceeEEEEEcChhH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~~~-----~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
.+++ +++|.++|++||+++|+|++|+..... .... .+.|++++|+||++ +++|+|+|+++++++ +
T Consensus 178 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~-~~~G~r~G~~~~~~~-~ 255 (388)
T 1j32_A 178 MVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTY-AMTGWRVGFLAGPVP-L 255 (388)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTT-TCTTTCCEEEECCHH-H
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhcc-CCcccceEEEEeCHH-H
Confidence 9975 999999999999999999999854321 1111 45899999999999 677999999998754 5
Q ss_pred HHHHHHHHHhcCCCCChhhHHHHhhccc----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhcc
Q 021783 142 AKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 217 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (307)
.+.+...........+...+..+...++ .+....+...++.+.+.+.|++.+++.. . . .
T Consensus 256 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~--------~--------~-~ 318 (388)
T 1j32_A 256 VKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLEC--------P--------K-P 318 (388)
T ss_dssp HHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBC--------C--------C-C
T ss_pred HHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcc--------c--------C-C
Confidence 5555555444444445555544444432 2444555666777777777776532210 0 0 0
Q ss_pred CCCceEEEEeCC-HHHHHHHHhcCCc-ceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHH
Q 021783 218 GAGSVLSFLTGS-LALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVND 293 (307)
Q Consensus 218 ~~~~~~~~~~~~-~~~~~~~~~~l~~-~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~ 293 (307)
..+.++++.++. ......+.+.|.. +||.++.|..|. .++++|+|++. +++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----------------------~~~~iRis~~~~~~~i~~ 375 (388)
T 1j32_A 319 DGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFG-----------------------ADDCIRLSYATDLDTIKR 375 (388)
T ss_dssp CBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGT-----------------------CTTBEEEECCSCHHHHHH
T ss_pred CeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhC-----------------------CCCcEEEEecCCHHHHHH
Confidence 112333444431 1135677777765 699888776522 14569999975 56777
Q ss_pred HHHHHHHHHhc
Q 021783 294 LISDLDKALRT 304 (307)
Q Consensus 294 ~i~~l~~~l~~ 304 (307)
.++.|.+++++
T Consensus 376 ~~~~l~~~l~~ 386 (388)
T 1j32_A 376 GMERLEKFLHG 386 (388)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777777654
No 42
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.95 E-value=5.1e-27 Score=206.06 Aligned_cols=254 Identities=14% Similarity=0.199 Sum_probs=181.0
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCC----CceEEEEeCCCCCccccccHH
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP----WTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~----~~~~v~~~~~~n~tG~~~~~~ 80 (307)
.++.+++++||+|++++|+|+++. ..++..|++++.++..|++++++.+++ ++++|++++++||||.+.+++
T Consensus 118 ~~~~~~~~~gd~V~~~~p~~~~~~----~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~ 193 (398)
T 3a2b_A 118 GPLSCLMGRNDYILLDERDHASII----DGSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLP 193 (398)
T ss_dssp HHHHHSSCTTCEEEEETTCCHHHH----HHHHHSSSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHH
T ss_pred HHHHHHhCCCCEEEECCccCHHHH----HHHHHcCCceEEeCCCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHH
Confidence 455667899999999999999887 556678999999999999999999875 799999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcC----CccC-C----CccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH-HH
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLS----RPLE-L----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QN 150 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~----~~~~-~----~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~-~~ 150 (307)
+|.++|++||+++|+|++|+.+.+. .... + ++|++++|+||++ +++| |+++++++ +.+.+... ..
T Consensus 194 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~-~~~G---G~~~~~~~-~~~~l~~~~~~ 268 (398)
T 3a2b_A 194 ELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSL-ASLG---GFVAGDAD-VIDFLKHNARS 268 (398)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTT-CSSC---EEEEECHH-HHHHHHHHCHH
T ss_pred HHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccc-cCCC---cEEEeCHH-HHHHHHHhccc
Confidence 9999999999999999999866431 1111 1 2599999999999 5665 99998754 44444432 22
Q ss_pred hc-CCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 151 AE-GSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 151 ~~-~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
.. .....+.....+...++.+ ....+...++.+.+.+.|++. ++ .-. ...+.++++.
T Consensus 269 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~--------~~~----------~~~g~~~~~~ 329 (398)
T 3a2b_A 269 VMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH-GF--------DLG----------ATESPILPIF 329 (398)
T ss_dssp HHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT-TC--------CBC----------SCCSSEEEEE
T ss_pred ceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc-CC--------CcC----------CCCCCEEEEE
Confidence 22 2233333333333444332 234455566666777777654 11 100 1135788888
Q ss_pred eCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHH
Q 021783 227 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKAL 302 (307)
Q Consensus 227 ~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l 302 (307)
+++......+.+.|..+||.++.|..+.. | ..++++|++++. +++++.++.|.+++
T Consensus 330 ~~~~~~~~~l~~~l~~~gi~v~~~~~~~~---~-----------------~~~~~iRis~~~~~~~e~i~~~~~~l~~~l 389 (398)
T 3a2b_A 330 IRSNEKTFWVTKMLQDDGVFVNPVVSPAV---P-----------------AEESLIRFSLMATHTYDQIDEAIEKMVKVF 389 (398)
T ss_dssp CCCHHHHHHHHHHHHHTTEECEEECTTTS---C-----------------GGGCEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCcEEEeeCCCCC---C-----------------CCCceEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 87654577888888888999887765321 0 125679999984 67888888888888
Q ss_pred hcCC
Q 021783 303 RTGP 306 (307)
Q Consensus 303 ~~~~ 306 (307)
++++
T Consensus 390 ~~~~ 393 (398)
T 3a2b_A 390 KQAE 393 (398)
T ss_dssp HHCC
T ss_pred HHhC
Confidence 7654
No 43
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.95 E-value=1.9e-28 Score=215.20 Aligned_cols=272 Identities=19% Similarity=0.133 Sum_probs=171.0
Q ss_pred HH-HHHHHhc----CCCC-eEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCC
Q 021783 3 AL-AAVTHLL----GTGE-EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTN 71 (307)
Q Consensus 3 al-~~~~~~~----~~gd-~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n 71 (307)
|+ .++.+++ ++|| +|++++++|+++...+... +..|++++.++.+ |++++++++++++++|++++++|
T Consensus 92 al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~n 170 (400)
T 3vax_A 92 SNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHL-AGRGFEVDFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNN 170 (400)
T ss_dssp HHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHH-HTTTCEEEEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCT
T ss_pred HHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHH-HhcCCeEEEEccCCCCCcCHHHHHHhcCCCceEEEEECCCC
Confidence 44 3444555 8999 9999999999887666544 5689999999975 89999999999999999999999
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEE-EcChhH-------H
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLA-VKGERL-------A 142 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~-~~~~~~-------~ 142 (307)
|||.+.|+++|.++|++||+++|+|++|+.+..+ +.... .|++++|+||++ |+.| .|+++ ++++.+ .
T Consensus 171 ptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~-~d~~~~s~~K~~-g~~g--~g~~~~~~~~~~~~~~~~~~ 246 (400)
T 3vax_A 171 ETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP-IDMISISGHKIG-APKG--VGALVTRRREEMDDERVPLE 246 (400)
T ss_dssp TTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC-CSEEEEETGGGT-SCSS--CEEEEECBCSSSTTCBCCCC
T ss_pred CceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc-CcEEEEeHHHhC-CCCc--eEEEEEecchhccccccccC
Confidence 9999999999999999999999999999987755 44445 899999999966 6777 78888 776211 1
Q ss_pred HHHHH---HHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhh
Q 021783 143 KELYF---LQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 215 (307)
Q Consensus 143 ~~~~~---~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 215 (307)
..... .........+.........+++. ++...++..++.+.+.+.|+ .+++ ++..+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~--------------~~~~~~ 311 (400)
T 3vax_A 247 PIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-STSF--------------QVNGDQ 311 (400)
T ss_dssp CSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-TTTC--------------EECSCT
T ss_pred ceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-CCCE--------------EEeCCc
Confidence 10000 00111222333333333333332 23334444555555666555 3322 111111
Q ss_pred ccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC----CCeEEEEe-cc--
Q 021783 216 AKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISV-GI-- 288 (307)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~iRis~-~~-- 288 (307)
....+++++|.+.+.+ ...+.+.|. +||.++.|..+.....+ +.......|.. ++++|||+ +.
T Consensus 312 ~~~~~~~~~~~~~~~~-~~~l~~~L~-~gi~v~~g~~~~~~~~~--------~~~~~~~~g~~~~~~~~~iRls~~~~~~ 381 (400)
T 3vax_A 312 DHVVPHILNLSFEDVD-AEAFLVTLK-DLVAVATGSASTSASFT--------PSHVLRAMGLPEEAASKSLRFSWTPGQA 381 (400)
T ss_dssp TSBCTTEEEEECTTCC-HHHHHHHHH-HHHHHTTTTEEEEEEEC--------CHHHHHTTTCCHHHHTSEEEEEEEEC--
T ss_pred ccCCCCEEEEEeCCCC-HHHHHHHHh-cCcEEEecccccCCCCC--------ccHHHHHcCCCccccCceEEEEccCCCC
Confidence 1113467888876543 778888888 99999999865432111 22233344544 48999999 63
Q ss_pred --CChHHHHHHHHHHHhc
Q 021783 289 --EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 --~~~~~~i~~l~~~l~~ 304 (307)
++++++++.|++++++
T Consensus 382 t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 382 TDLDVEELARGVAKLKPS 399 (400)
T ss_dssp ------------------
T ss_pred CHHHHHHHHHHHHHHhcc
Confidence 6777777777776653
No 44
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.95 E-value=4.5e-27 Score=209.32 Aligned_cols=259 Identities=13% Similarity=0.105 Sum_probs=180.0
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcC----C--CceEEE-EeCCC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIG----P--WTKLVW-VESPT 70 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~----~--~~~~v~-~~~~~ 70 (307)
|+ .++.+++++||+|+++.|+|+++. ..++..|++++.++.+ |+++|++.++ + ++++|+ +++++
T Consensus 152 al~~~~~~l~~~Gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~ 227 (448)
T 3aow_A 152 ALDLIGRVFLNPGDIVVVEAPTYLAAL----QAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQ 227 (448)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHTTCCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSC
T ss_pred HHHHHHHHHcCCCCEEEEeCCChHHHH----HHHHHcCCEEEEeccCCCCCCHHHHHHHHhhhhccCCCCeEEEECCCCC
Confidence 45 455567899999999999998887 5566789999999873 8899999886 5 789985 67999
Q ss_pred CCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----CCc---cCCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 71 NPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----SRP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 71 n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~---~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
||||.+++ +++|.++|++||+++|+|++|+...+ ... ...+.+++++||||++ + +|+|+||++++++
T Consensus 228 NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~-~-~GlriG~v~~~~~ 305 (448)
T 3aow_A 228 NPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKIL-A-PGFRIGWMVGDPG 305 (448)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTT-C-GGGCCEEEEECHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhc-c-ccccEEEEEeCHH
Confidence 99999986 67999999999999999999985432 112 2336789999999999 5 7999999999854
Q ss_pred hHHHHHHHHHHhcCCCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcC-C-CccEEecCCCCCCCchHH
Q 021783 140 RLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASH-P-RVKKVNYAGLPEHPGHEL 211 (307)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~-~-~~~~~~~~~l~~~~~~~~ 211 (307)
+.+.+...........+...+..+...++. +....+.+.++.+.+.+.|++. + ++ .+..
T Consensus 306 -l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~-~~~~----------- 372 (448)
T 3aow_A 306 -IIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGV-KWTK----------- 372 (448)
T ss_dssp -HHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTC-EECC-----------
T ss_pred -HHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCe-EEeC-----------
Confidence 555554443333233344555554444432 2223344445566666666542 2 11 1100
Q ss_pred HhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc---
Q 021783 212 HYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--- 288 (307)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--- 288 (307)
...+.++++.++...+..++.+.+..+||.+.+|..|.. .+..++++|||++.
T Consensus 373 -----p~~g~~~~v~~~~~~~~~~l~~~l~~~gV~v~pg~~f~~-------------------~~~~~~~iRls~~~~~~ 428 (448)
T 3aow_A 373 -----PEGGMFIWVTLPDGIDSKKMLERAIKKGVAYVPGEAFYA-------------------HRDVKNTMRLNFTYVDE 428 (448)
T ss_dssp -----CSBSSEEEEECSTTCCHHHHHHHHHHTTEECEEGGGGST-------------------TCCCCSEEEEECSSSCT
T ss_pred -----CCccEEEEEEcCCCCCHHHHHHHHHHCCcEEEcchhhcC-------------------CCCCCCEEEEEeCCCCH
Confidence 113567788886433367788888778999988775321 11235789999985
Q ss_pred CChHHHHHHHHHHHhc
Q 021783 289 EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 ~~~~~~i~~l~~~l~~ 304 (307)
+++++.++.|.+++++
T Consensus 429 e~i~~~~~~L~~~l~~ 444 (448)
T 3aow_A 429 DKIMEGIKRLAETIKE 444 (448)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5788888888887754
No 45
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.95 E-value=6.2e-27 Score=202.57 Aligned_cols=247 Identities=19% Similarity=0.204 Sum_probs=171.4
Q ss_pred HH-HHHHHhcCCC-CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~g-d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~ 75 (307)
++ .++.+++++| |+|+++.|+|+++. ..++..|++++.++.+ |+++++++++ ++++|++++|+||||.
T Consensus 87 ai~~~~~~~~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~ 161 (356)
T 1fg7_A 87 GIELLIRAFCEPGKDAILYCPPTYGMYS----VSAETIGVECRTVPTLDNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQ 161 (356)
T ss_dssp HHHHHHHHHCCTTTCEEEECSSSCTHHH----HHHHHHTCEEEECCCCTTSCCCHHHHHTSCT-TEEEEEEESSCTTTCC
T ss_pred HHHHHHHHHhCCCCCEEEEeCCChHHHH----HHHHHcCCEEEEeeCCCCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCC
Confidence 45 4555678899 99999999999887 5556689999999863 7899999988 8999999999999999
Q ss_pred cccHHHH---HHHHHHcCCEEEEeCccCCCCc-C---C-ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH
Q 021783 76 ICDIRKI---AEMAHAHGALLLVDNSIMSPVL-S---R-PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 147 (307)
Q Consensus 76 ~~~~~~l---~~~~~~~~~~li~D~a~~~~~~-~---~-~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~ 147 (307)
+++.+++ +++|+ +|+++|+|++|+.... . . ...++.+++++|+||++ |.+|+|+|+++++++ +.+.+..
T Consensus 162 ~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~-~~~~l~~ 238 (356)
T 1fg7_A 162 LINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAF-ALAGLRCGFTLANEE-VINLLMK 238 (356)
T ss_dssp CCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTT-CCGGGCCEEEEECHH-HHHHHHH
T ss_pred CCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhh-cCchhhhEEEEeCHH-HHHHHHH
Confidence 9985554 55555 8999999999984331 1 1 13356899999999999 668999999999744 4444443
Q ss_pred HHHhcCCCCChhhHHHHhhcccc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCce
Q 021783 148 LQNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 222 (307)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 222 (307)
... ....+...+..+...++. +....+...++.+.+.+.|++.+.+.. .. +..+++
T Consensus 239 ~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~----------------~~~~~~ 299 (356)
T 1fg7_A 239 VIA--PYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQ-VF----------------DSETNY 299 (356)
T ss_dssp HSC--SSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEE-EC----------------CCSSSE
T ss_pred hcC--CCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceE-EC----------------CCCCeE
Confidence 322 223455556655555543 334445556666677777776542211 11 113667
Q ss_pred EEEEeCCHHHHHHHHhcCCcceeecCC-CCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHH
Q 021783 223 LSFLTGSLALSKHVVETTKYFSITVSF-GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKA 301 (307)
Q Consensus 223 ~~~~~~~~~~~~~~~~~l~~~gi~v~~-g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~ 301 (307)
+++.++ +..++.+.|.++||.++. |..+. . ++++|||++. ++.++.+.++
T Consensus 300 ~~~~~~---~~~~l~~~L~~~gI~v~~~g~~~~----------------------~-~~~iRis~~~---~~e~~~~~~~ 350 (356)
T 1fg7_A 300 ILARFK---ASSAVFKSLWDQGIILRDQNKQPS----------------------L-SGCLRITVGT---REESQRVIDA 350 (356)
T ss_dssp EEEEET---THHHHHHHHHHTTEECEECTTSTT----------------------C-TTEEEEECCC---HHHHHHHHHH
T ss_pred EEEECC---CHHHHHHHHHHCCEEEEECCCCCC----------------------C-CCeEEEEeCC---HHHHHHHHHH
Confidence 788886 356777888788999887 65421 1 4579999984 4455555555
Q ss_pred HhcC
Q 021783 302 LRTG 305 (307)
Q Consensus 302 l~~~ 305 (307)
|+++
T Consensus 351 l~~~ 354 (356)
T 1fg7_A 351 LRAE 354 (356)
T ss_dssp HHTC
T ss_pred HHhh
Confidence 5543
No 46
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.95 E-value=2.6e-28 Score=212.66 Aligned_cols=260 Identities=13% Similarity=0.121 Sum_probs=180.9
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC---ChHHHHhhcCCCceEEEEeCCCCCcccccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---DLDEVASAIGPWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 78 (307)
|+ .++.+++++||+|+++.|+|.++. ..++..|++++.++.+ |++++++.++++++++++++|+||||.+++
T Consensus 93 a~~~~~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~ 168 (377)
T 3fdb_A 93 GLYIAIDHFTPAQSKVIVPTPAYPPFF----HLLSATQREGIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGMVFA 168 (377)
T ss_dssp HHHHHHHHHSCTTCCEEEEESCCTHHH----HHHHHHTCCEEEEECTTSCCHHHHHHHHHTTCCEEEEESSBTTTTBCCC
T ss_pred HHHHHHHHhcCCCCEEEEcCCCcHhHH----HHHHHcCCEEEEccCCCCCCHHHHHHHhccCCCEEEEeCCCCCCCCCCC
Confidence 45 455567899999999999999887 5567789999999986 899999999888999999999999999985
Q ss_pred ---HHHHHHHHHHcCCEEEEeCccCCCCcC------Cc---cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH
Q 021783 79 ---IRKIAEMAHAHGALLLVDNSIMSPVLS------RP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 146 (307)
Q Consensus 79 ---~~~l~~~~~~~~~~li~D~a~~~~~~~------~~---~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~ 146 (307)
+++|.++|++||+++|+|++|+..... .. ...+.+++++|+||++ |.+|+++|++++.++.+.+.+.
T Consensus 169 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~~~~~~ 247 (377)
T 3fdb_A 169 PEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAW-NIAGLKCAQIIFSNPSDAEHWQ 247 (377)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTT-TCGGGCCEEEECCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhc-cCcchhheEEEeCCHHHHHHHH
Confidence 778888899999999999999752211 11 1235679999999999 6678999998886666666655
Q ss_pred HHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhc-CCCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 147 FLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
..........+...+..+...++. ++...+...++.+.+.+.+++ .+++ .+.. ...+.
T Consensus 248 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~----------------~~~~~ 310 (377)
T 3fdb_A 248 QLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGA-KITP----------------MQATY 310 (377)
T ss_dssp HSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTC-EECC----------------CSBCS
T ss_pred HHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCc-eEec----------------CCeeE
Confidence 444443444555555554444432 344455666677777777765 3332 1110 11233
Q ss_pred eEEEEeCCHHHHHHHHhcCCc-ceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHH
Q 021783 222 VLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDL 298 (307)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~l~~-~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l 298 (307)
++++.++......++.+.+.. .||.+++|..|... .++++|+|++. +++++.++.|
T Consensus 311 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---------------------~~~~~Ris~~~~~e~i~~~l~~l 369 (377)
T 3fdb_A 311 LMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGED---------------------GTGFCRLNFATSREVLEEAIDRM 369 (377)
T ss_dssp EEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCGG---------------------GTTEEEEECCSCHHHHHHHHHHH
T ss_pred EEEEECcccCCCHHHHHHHHHhCCEEecCChhccCC---------------------CCCEEEEEeCCCHHHHHHHHHHH
Confidence 446776542111334444433 49999888764311 25779999986 6677788888
Q ss_pred HHHHhcC
Q 021783 299 DKALRTG 305 (307)
Q Consensus 299 ~~~l~~~ 305 (307)
.+++++.
T Consensus 370 ~~~l~~~ 376 (377)
T 3fdb_A 370 AKAVSHH 376 (377)
T ss_dssp HHHHTTC
T ss_pred HHHHhhc
Confidence 8887654
No 47
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.95 E-value=1.6e-27 Score=207.69 Aligned_cols=253 Identities=15% Similarity=0.072 Sum_probs=173.6
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-----CChHHHHhhcCCCceEEEEeCCCCCcccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAIGPWTKLVWVESPTNPRQQI 76 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 76 (307)
|+ .++.+++++||+|+++.|+|+++. ..++..|++++.+|. .|++++++.+++++++|++++|+||||.+
T Consensus 99 a~~~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~ 174 (376)
T 2dou_A 99 GLAHLLLALTEPEDLLLLPEVAYPSYF----GAARVASLRTFLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPTGAV 174 (376)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCHHHH----HHHHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCC
T ss_pred HHHHHHHHhcCCCCEEEECCCCcHhHH----HHHHHcCCEEEEeeCCCCCCCCHHHHHHhhccCceEEEECCCCCCcCcc
Confidence 45 455567889999999999998887 556678999999986 37788888887788999999999999999
Q ss_pred cc---HHHHHHHHHHcCCEEEEeCccCCCCc----CCc----cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHH
Q 021783 77 CD---IRKIAEMAHAHGALLLVDNSIMSPVL----SRP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 145 (307)
Q Consensus 77 ~~---~~~l~~~~~~~~~~li~D~a~~~~~~----~~~----~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~ 145 (307)
++ +++|.++|++||+++|+|++|+.+.. ... ...+.+++++|+||++ |.+|+|+|+++++++ +.+.+
T Consensus 175 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~-~~~~l 252 (376)
T 2dou_A 175 ADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSY-NLAGFRLGFALGSEE-ALARL 252 (376)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHH-TCGGGCCEEEEECHH-HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhc-CChhheeEEEecCHH-HHHHH
Confidence 86 78899999999999999999975322 111 2236789999999999 567889999998754 55555
Q ss_pred HHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 146 YFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
...........+...+..+...++. +....+...++.+.+.+.|++. + .+.. ...+.
T Consensus 253 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~-~~~~----------------~~~~~ 313 (376)
T 2dou_A 253 ERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--L-SLLP----------------PRATM 313 (376)
T ss_dssp HHHHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--S-EECC----------------CCBSS
T ss_pred HHHHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--c-CccC----------------CCeeE
Confidence 5544444444455555555555543 2333444455566666666543 1 1110 11244
Q ss_pred eEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHH
Q 021783 222 VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLD 299 (307)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~ 299 (307)
++++.++...+...+.+.|..+||.++.|..|.. ..++++|||++. +++++.++.|.
T Consensus 314 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~---------------------~~~~~~Ris~~~~~~~i~~~l~~l~ 372 (376)
T 2dou_A 314 YLWGRLPEGVDDLEFGLRLVERGVALAPGRGFGP---------------------GGKGFVRIALVRPLEELLEAAKRIR 372 (376)
T ss_dssp EEEEECCTTCCHHHHHHHHHHTTEECEEGGGGCG---------------------GGTTEEEEECCSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHCCEEEcCchhhCC---------------------CCCCeEEEEecCCHHHHHHHHHHHH
Confidence 6777775432356788888778999988765321 025679999986 34444444444
Q ss_pred HH
Q 021783 300 KA 301 (307)
Q Consensus 300 ~~ 301 (307)
++
T Consensus 373 ~~ 374 (376)
T 2dou_A 373 EA 374 (376)
T ss_dssp HT
T ss_pred HH
Confidence 43
No 48
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.95 E-value=8e-27 Score=206.71 Aligned_cols=256 Identities=15% Similarity=0.083 Sum_probs=180.4
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++..++++||+|++++|+|.++. ..++..|++++.++.+ |++++++.++++++++++++|+||||
T Consensus 130 al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG 205 (427)
T 3dyd_A 130 AIDLCLAVLANPGQNILVPRPGFSLYK----TLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCG 205 (427)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTHHH----HHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTC
T ss_pred HHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCEEEEECCCCCCC
Confidence 45 455567889999999999998877 5677889999988763 88999999998899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----CCccCCC---ccEEEeccccccccCCCceeEEEEEcCh----
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELG---ADIVMHSATKFIAGHSDVMAGVLAVKGE---- 139 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~---~d~~~~s~~K~~~g~~g~~~G~~~~~~~---- 139 (307)
.+++ +++|+++|+++|+++|+|++|+.... ......+ ..++++|+||.+ +.+|+|+|+++++++
T Consensus 206 ~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~-~~~G~riG~~~~~~~~~~~ 284 (427)
T 3dyd_A 206 SVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRW-LVPGWRLGWILIHDRRDIF 284 (427)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTS-SCGGGCCEEEEEECSTTSS
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccC-CCcCcceEEEEecCcchhh
Confidence 9999 99999999999999999999975321 1222222 348899999998 567999999999862
Q ss_pred --hHHHHHHHHHHhcCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHH
Q 021783 140 --RLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 212 (307)
Q Consensus 140 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~ 212 (307)
.+.+.+...... ....+...+..+...++ .+....+++.++.+.+.+.|++.+++. ...+
T Consensus 285 ~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~p----------- 351 (427)
T 3dyd_A 285 GNEIRDGLVKLSQR-ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLR-PVRP----------- 351 (427)
T ss_dssp HHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEE-EECC-----------
T ss_pred HHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCC-----------
Confidence 344444433322 23344444444444443 244555666777777888887665431 1111
Q ss_pred hhhccCCCceEEEEeCCH-----HHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe
Q 021783 213 YSQAKGAGSVLSFLTGSL-----ALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 286 (307)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 286 (307)
..+.++++.++.. ....++.+.+ +++||.+.+|..+. .++++|||+
T Consensus 352 -----~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~-----------------------~~~~iRis~ 403 (427)
T 3dyd_A 352 -----SGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFE-----------------------YPNFIRVVI 403 (427)
T ss_dssp -----SBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGT-----------------------CTTEEEEES
T ss_pred -----CeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccC-----------------------CCCeEEEEE
Confidence 1345666666521 2355666666 47899988876532 156799999
Q ss_pred cc--CChHHHHHHHHHHHhc
Q 021783 287 GI--EDVNDLISDLDKALRT 304 (307)
Q Consensus 287 ~~--~~~~~~i~~l~~~l~~ 304 (307)
+. +++++.++.|.+++++
T Consensus 404 ~~~~e~i~~~l~~l~~~l~~ 423 (427)
T 3dyd_A 404 TVPEVMMLEACSRIQEFCEQ 423 (427)
T ss_dssp CSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 75 6777888888877754
No 49
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.95 E-value=3e-27 Score=209.11 Aligned_cols=264 Identities=21% Similarity=0.216 Sum_probs=176.5
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHH
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 86 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~ 86 (307)
++||+|+++.++|+++...+..+ +..|++++.++.+ |++++++.+++++++|++++++||||.+.|+++|.++|
T Consensus 111 ~~gd~Vl~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~ 189 (423)
T 3lvm_A 111 KKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMC 189 (423)
T ss_dssp TTCCEEEEETTSCHHHHHHHHHH-HHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHH
T ss_pred cCCCEEEECCccchHHHHHHHHH-HHcCCEEEEeccCCCCccCHHHHHHhcCCCcEEEEEeCCCCCCccccCHHHHHHHH
Confidence 48999999999999887655433 6679999999985 89999999999999999999999999999999999999
Q ss_pred HHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH------HhcCCCCChh
Q 021783 87 HAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ------NAEGSGLAPF 159 (307)
Q Consensus 87 ~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 159 (307)
++||+++|+|++|+.+..+ +...++.|++++|+||++ |+.| +|+++++++.......... .....+.+..
T Consensus 190 ~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~-g~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (423)
T 3lvm_A 190 RARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIY-GPKG--IGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVH 266 (423)
T ss_dssp HHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTTTT-SCSS--CEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHH
T ss_pred HHcCCEEEEEhhhhcCCCCcChhhcCCCEEEechHHhc-CCCC--eEEEEEeccccCCCCccccCCcccccccCCCCCHH
Confidence 9999999999999988764 566678999999999977 6677 8999988653322111000 0111222333
Q ss_pred hHHHHhhccccH----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHH
Q 021783 160 DCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKH 235 (307)
Q Consensus 160 ~~~~~~~~l~~~----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (307)
.......+++.+ +...++..++.+.+.+.|++.+.+ ++..+.....++++.|.+.+.+ ...
T Consensus 267 ~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~-~~~ 331 (423)
T 3lvm_A 267 QIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEV--------------YLNGDLEHGAPNILNVSFNYVE-GES 331 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTE--------------EEESCSTTBCTTEEEEEETTSC-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCE--------------EEeCCccccCCCeEEEEeCCCC-HHH
Confidence 333333333322 333444555556666666554432 1111111113467777775543 677
Q ss_pred HHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC----CCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 236 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 236 ~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+.+.|.. +.++.|..+..... .+.......|.. ++++||+++. ++++++++.|.+++++
T Consensus 332 l~~~l~~--i~v~~g~~~~~~~~--------~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~ 398 (423)
T 3lvm_A 332 LIMALKD--LAVSSGSACTSASL--------EPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGR 398 (423)
T ss_dssp HHHHTTT--EECBCCCC-----C--------CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhh--heeccCccccCCCc--------cccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 7787876 88888876432110 112223334443 4889999984 5677777777777653
No 50
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.95 E-value=3.2e-28 Score=214.45 Aligned_cols=260 Identities=12% Similarity=0.091 Sum_probs=180.3
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC-CceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP-WTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~-~~~~v~~~~~~n~tG~ 75 (307)
|+ .++.+++++||+|++++++|++.. +...++..|++++.++.+ |++++++.+++ ++++|++++++||||.
T Consensus 76 al~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~ 153 (411)
T 3nnk_A 76 GIEAILVSAIRPGDKVLVPVFGRFGHL--LCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTM 153 (411)
T ss_dssp HHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTE
T ss_pred HHHHHHHHhcCCCCEEEEecCCchHHH--HHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcce
Confidence 44 455667899999999999997632 226677889999999985 89999999985 8999999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH-----
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ----- 149 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~----- 149 (307)
+.|+++|.++|++||+++|+|++|+.+..+ +...+++|++++|+||+++++.| +|+++++++.. +.+....
T Consensus 154 ~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~g--~g~~~~~~~~~-~~~~~~~~~~~~ 230 (411)
T 3nnk_A 154 LQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLGGPSG--TSPITLSARME-EAIRRRKCVEEG 230 (411)
T ss_dssp ECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTCCCSS--EEEEEECHHHH-HHHHTTCCCCGG
T ss_pred eccHHHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccCCCCc--eEEEEECHHHH-HHHhhccccccc
Confidence 999999999999999999999999887765 66667899999999999767777 89999986543 3332211
Q ss_pred -------------------------------HhcCCCCChhhHHHHhhcccc-----HHHHHHHHHHHHHHHHHHHhcCC
Q 021783 150 -------------------------------NAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHP 193 (307)
Q Consensus 150 -------------------------------~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~ 193 (307)
.....+.+.........+++. ++...++..++.+.+.+.|++.
T Consensus 231 ~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~- 309 (411)
T 3nnk_A 231 IRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM- 309 (411)
T ss_dssp GCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-
Confidence 000112222222222233322 3344455566666677767653
Q ss_pred CccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHH
Q 021783 194 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVR 272 (307)
Q Consensus 194 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~ 272 (307)
++ .- ..+.....+.++++.++......++.+.|.++ ||.++.|..
T Consensus 310 g~--------~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~-------------------- 355 (411)
T 3nnk_A 310 GL--------ET------FGDLKHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSFG-------------------- 355 (411)
T ss_dssp TC--------CB------CSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEECCG--------------------
T ss_pred CC--------Ee------CCCcccccccEEEEECCCCCCHHHHHHHHHHhcCeEEeCccC--------------------
Confidence 11 10 00011123667888885333367788877665 998876632
Q ss_pred HhcCCCCCeEEEEe-cc----CChHHHHHHHHHHHhcC
Q 021783 273 QARGLTEDLVRISV-GI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 273 ~~~~~~~~~iRis~-~~----~~~~~~i~~l~~~l~~~ 305 (307)
...++++||++ +. ++++++++.|.++++++
T Consensus 356 ---~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~ 390 (411)
T 3nnk_A 356 ---PLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYL 390 (411)
T ss_dssp ---GGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred ---CCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHc
Confidence 11256799998 53 66888888888887654
No 51
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.95 E-value=3.4e-27 Score=207.67 Aligned_cols=258 Identities=16% Similarity=0.078 Sum_probs=179.4
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~ 75 (307)
|+ .++.+++++||+|+++.|+|+++. ..++..|++++.++.+ |++++++.+++++++|++++|+||||.
T Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 196 (404)
T 2o1b_A 121 GLVAVPTCVINPGDYVLLPDPGYTDYL----AGVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGS 196 (404)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCSSHH----HHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCC
T ss_pred HHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHCCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCc
Confidence 44 455567889999999999999988 5566789999998863 678888888778899999999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCccCCCCc----CCccC----CCccEEEeccccccccCCCceeEEEEEcChhHHHH
Q 021783 76 ICD---IRKIAEMAHAHGALLLVDNSIMSPVL----SRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 144 (307)
Q Consensus 76 ~~~---~~~l~~~~~~~~~~li~D~a~~~~~~----~~~~~----~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~ 144 (307)
+++ +++|.++|+++|+++|+|++|+.... ..... .+.+++++|+||++ |.+|+|+|+++++++ +.+.
T Consensus 197 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~-~~~~ 274 (404)
T 2o1b_A 197 TATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGY-NMSGFRVGFAVGNKD-MIQA 274 (404)
T ss_dssp CCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTT-TCGGGCCEEEEECHH-HHHH
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhc-cCchhheEeEecCHH-HHHH
Confidence 985 78999999999999999999985432 12222 25789999999999 557889999998754 5555
Q ss_pred HHHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCC
Q 021783 145 LYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 220 (307)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 220 (307)
+...........+...+..+...++. ++...+...++.+.+.+.|++. ++. +.. ...+
T Consensus 275 l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~----------------~~~g 336 (404)
T 2o1b_A 275 LKKYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA-DLP-FVH----------------AKGG 336 (404)
T ss_dssp HHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-EEC----------------CCBS
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCe-ecC----------------CCcc
Confidence 55544444444555555555444432 3333444556666677777654 221 110 1123
Q ss_pred ceEEEEeCCHHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHH
Q 021783 221 SVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISD 297 (307)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~ 297 (307)
.++++.++...+..++.+.+. .+||.++.|..|.. ..++++|||++. +++++.++.
T Consensus 337 ~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~---------------------~~~~~iRis~~~~~e~l~~~l~~ 395 (404)
T 2o1b_A 337 IYVWLETPPGYDSEQFEQFLVQEKSILVAPGKPFGE---------------------NGNRYVRISLALDDQKLDEAAIR 395 (404)
T ss_dssp SEEEEECCTTCCHHHHHHHHHHHHCEECEESGGGCG---------------------GGTTEEEEECCSCTTHHHHHHHH
T ss_pred eEEEEeCCCCCCHHHHHHHHHHHCCEEEeCchhhCc---------------------CCCCeEEEEEcCCHHHHHHHHHH
Confidence 457777753323566777765 57999988776321 025679999985 567777777
Q ss_pred HHHHHhcC
Q 021783 298 LDKALRTG 305 (307)
Q Consensus 298 l~~~l~~~ 305 (307)
|.+++++.
T Consensus 396 l~~~l~~~ 403 (404)
T 2o1b_A 396 LTELAYLY 403 (404)
T ss_dssp HHGGGGGG
T ss_pred HHHHHHhh
Confidence 77777653
No 52
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.95 E-value=1.2e-26 Score=203.11 Aligned_cols=257 Identities=14% Similarity=0.164 Sum_probs=176.9
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--------CChHHHHhhcCC-CceEEEEeCCCCC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIGP-WTKLVWVESPTNP 72 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--------~d~~~l~~~l~~-~~~~v~~~~~~n~ 72 (307)
|+ .++.+++++||+|+++.|+|+++. ..++..|++++.+|. .|++++++.+++ ++++|++++|+||
T Consensus 99 al~~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~np 174 (390)
T 1d2f_A 99 MVSELIRQWSETGEGVVIHTPAYDAFY----KAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNP 174 (390)
T ss_dssp HHHHHHHHSSCTTCEEEEEESCCHHHH----HHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTT
T ss_pred HHHHHHHHhcCCCCEEEEcCCCcHHHH----HHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCC
Confidence 45 455567899999999999998887 556678999998886 378999999985 8999999999999
Q ss_pred cccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----CccCCC--c-cEEEeccccccccCCCceeEEEEEcChhH
Q 021783 73 RQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELG--A-DIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 73 tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~~~~~--~-d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
||.+++ +++|.++|++||+++|+|++|+..... .....+ . |. ++|+||++ |++|+|+|+++++++.+
T Consensus 175 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~-~~~G~r~G~~~~~~~~~ 252 (390)
T 1d2f_A 175 TGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSF-NIPALTGAYGIIENSSS 252 (390)
T ss_dssp TCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHH-TCGGGCCEEEEECSHHH
T ss_pred CCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhh-cccChhheEEEECCHHH
Confidence 999987 899999999999999999999854321 222222 1 66 99999999 66788999999976666
Q ss_pred HHHHHHHHH-hcCC-CCChhhHHHHhhccc----cHHHHHHHHHHHHHHHHHHHhc-CCCccEEecCCCCCCCchHHHhh
Q 021783 142 AKELYFLQN-AEGS-GLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 142 ~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~l~~~~~~~~~~~ 214 (307)
.+.+..... .... +.+...+..+...++ .++...+...++.+.+.+.|++ .+++ .-.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--------~~~-------- 316 (390)
T 1d2f_A 253 RDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPEL--------NWQ-------- 316 (390)
T ss_dssp HHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSC--------CCC--------
T ss_pred HHHHHHHHhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCC--------EEe--------
Confidence 665555444 2232 444445444444443 2233344455666666776765 3322 111
Q ss_pred hccCCC-ceEEEEeCCH-HHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--C
Q 021783 215 QAKGAG-SVLSFLTGSL-ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--E 289 (307)
Q Consensus 215 ~~~~~~-~~~~~~~~~~-~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~ 289 (307)
+..+ .++++.++.. .+...+.+.|. .+||.+++|..|.. ..++++|||++. +
T Consensus 317 --~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~---------------------~~~~~~Ris~~~~~~ 373 (390)
T 1d2f_A 317 --IPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGE---------------------EGRGFVRLNAGCPRS 373 (390)
T ss_dssp --CCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCG---------------------GGTTEEEEECCSCHH
T ss_pred --cCCccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCC---------------------CCCCeEEEEecCCHH
Confidence 1123 3446777532 13667888887 68999988776321 025679999986 4
Q ss_pred ChHHHHHHHHHHHhc
Q 021783 290 DVNDLISDLDKALRT 304 (307)
Q Consensus 290 ~~~~~i~~l~~~l~~ 304 (307)
++++.++.|.+++++
T Consensus 374 ~l~~~l~~l~~~l~~ 388 (390)
T 1d2f_A 374 KLEKGVAGLINAIRA 388 (390)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 566666666666654
No 53
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.95 E-value=8.5e-27 Score=202.27 Aligned_cols=253 Identities=14% Similarity=0.163 Sum_probs=175.5
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCC------hHHHHhhcCCCceEEEEeCCCCCcccc
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCD------LDEVASAIGPWTKLVWVESPTNPRQQI 76 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d------~~~l~~~l~~~~~~v~~~~~~n~tG~~ 76 (307)
|+.++...+ +||+|+++.|+|+++. ..++..|++++.+|.++ ++++.+.++++++++++++|+||||.+
T Consensus 88 al~~~~~~~-~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~v~i~~p~nptG~~ 162 (364)
T 1lc5_A 88 SIFTVASGL-KPRRAMIVTPGFAEYG----RALAQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLL 162 (364)
T ss_dssp HHHHHHHHH-CCSEEEEEESCCTHHH----HHHHHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCC
T ss_pred HHHHHHHHc-CCCeEEEeCCCcHHHH----HHHHHcCCeEEEEeCCcccccchhHHHHHhccCCCCEEEEeCCCCCCCCC
Confidence 453333334 7899999999998887 55667899999998752 355666677788999999999999999
Q ss_pred cc---HHHHHHHHHHcCCEEEEeCccCCCCc------CCccCCCccEEEeccccccccCCCceeEEEE-EcChhHHHHHH
Q 021783 77 CD---IRKIAEMAHAHGALLLVDNSIMSPVL------SRPLELGADIVMHSATKFIAGHSDVMAGVLA-VKGERLAKELY 146 (307)
Q Consensus 77 ~~---~~~l~~~~~~~~~~li~D~a~~~~~~------~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~-~~~~~~~~~~~ 146 (307)
++ +++|.++|++||+++|+|++|+.+.. ......+.+++++|+||++ |.+|+|+|+++ .+ +.+.+.+.
T Consensus 163 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~-~~~~~~l~ 240 (364)
T 1lc5_A 163 PERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFY-AIPGLRLGYLVNSD-DAAMARMR 240 (364)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTT-TCTTTCCEEEECCC-HHHHHHHH
T ss_pred CCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhh-cCCccceEEEEECC-HHHHHHHH
Confidence 98 89999999999999999999974332 1123457899999999999 56788999999 66 44544444
Q ss_pred HHHHhcCCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceE
Q 021783 147 FLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 223 (307)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 223 (307)
.... ....+...+..+...++. ++...+.+.++.+.+.+.+++.+++. + . +..++++
T Consensus 241 ~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~----------------~~~g~~~ 300 (364)
T 1lc5_A 241 RQQM--PWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLT-V-Y----------------PGRANYL 300 (364)
T ss_dssp HHSC--TTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEE-E-C----------------CCSSSEE
T ss_pred HhCC--CCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCE-E-C----------------CCCCeEE
Confidence 3322 234555666666666654 33344455566667777776554321 1 1 1135677
Q ss_pred EEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHH
Q 021783 224 SFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKAL 302 (307)
Q Consensus 224 ~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l 302 (307)
++.+++. ...+.+.|..+||.++.|..+. +..++++|||++. ++++++++.|.+.+
T Consensus 301 ~~~~~~~--~~~l~~~l~~~gi~v~~g~~~~---------------------~~~~~~iRis~~~~~~~~~l~~~l~~~~ 357 (364)
T 1lc5_A 301 LLRCERE--DIDLQRRLLTQRILIRSCANYP---------------------GLDSRYYRVAIRSAAQNERLLAALRNVL 357 (364)
T ss_dssp EEEESCT--TCCHHHHHHTTTEECEECTTST---------------------TCCTTEEEEECCCHHHHHHHHHHHHHHC
T ss_pred EEECCCc--HHHHHHHHHHCCcEEeeCcccC---------------------CCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 8877531 3456666667799998877532 1135789999985 56677888888777
Q ss_pred hcC
Q 021783 303 RTG 305 (307)
Q Consensus 303 ~~~ 305 (307)
+++
T Consensus 358 ~~~ 360 (364)
T 1lc5_A 358 TGI 360 (364)
T ss_dssp ---
T ss_pred hcc
Confidence 643
No 54
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.95 E-value=1.1e-26 Score=204.13 Aligned_cols=266 Identities=18% Similarity=0.220 Sum_probs=181.1
Q ss_pred HH-HHHHHh----cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCC
Q 021783 3 AL-AAVTHL----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNP 72 (307)
Q Consensus 3 al-~~~~~~----~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~ 72 (307)
|+ .++.++ +++||+|++++++|++....+...++..|++++.++.+ |++++++++++++++|++++++||
T Consensus 97 a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~np 176 (406)
T 1kmj_A 97 GINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNV 176 (406)
T ss_dssp HHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTTEEEEEEESBCTT
T ss_pred HHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhccCCeEEEEeCCCcc
Confidence 44 445556 78999999999999988766666677889999999874 789999999989999999999999
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 151 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~ 151 (307)
||.+.|+++|.++|++||+++|+|++|+.+..+ +....+.|++++|+||.+ |++| +|+++++++ +.+.+......
T Consensus 177 tG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~~-g~~G--~G~~~~~~~-~~~~~~~~~~~ 252 (406)
T 1kmj_A 177 LGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLY-GPTG--IGILYVKEA-LLQEMPPWEGG 252 (406)
T ss_dssp TCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTT-SCTT--CEEEEECHH-HHHHCCCSSCS
T ss_pred ccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEEchhcc-CCCC--cEEEEEeHH-HHhhcCCcccC
Confidence 999999999999999999999999999987654 444457999999999999 7777 799999844 43333211100
Q ss_pred ---------------------cCCCCChhhHHHHh-hccccH-----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCC
Q 021783 152 ---------------------EGSGLAPFDCWICL-RGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLP 204 (307)
Q Consensus 152 ---------------------~~~~~~~~~~~~~~-~~l~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~ 204 (307)
.....+...+..+. .+++.+ ....+...++.+.+.+.|++.+++ .+..+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~--- 328 (406)
T 1kmj_A 253 GSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDL-TLYGP--- 328 (406)
T ss_dssp TTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTE-EEESC---
T ss_pred CCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCe-EEecC---
Confidence 00112223333222 333322 233444455666666666654332 11111
Q ss_pred CCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEE
Q 021783 205 EHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRI 284 (307)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRi 284 (307)
. ..++++.|.+++.+ ...+.+.|..+||.++.|..+.. | .....|. ++++|+
T Consensus 329 ----------~--~~~~~~~~~~~~~~-~~~~~~~l~~~gi~v~~g~~~~~---~-----------~~~~~g~-~~~iRi 380 (406)
T 1kmj_A 329 ----------Q--NRLGVIAFNLGKHH-AYDVGSFLDNYGIAVRTGHHCAM---P-----------LMAYYNV-PAMCRA 380 (406)
T ss_dssp ----------T--TCCSEEEEEETTCC-HHHHHHHHHHTTEECEEECTTCH---H-----------HHHHTTC-SCEEEE
T ss_pred ----------C--CcCCEEEEEECCCC-HHHHHHHHhhCCcEEEeccccch---H-----------HHHhcCC-CCeEEE
Confidence 0 13678888876433 56677888888999887765221 1 0011221 578999
Q ss_pred EeccC----ChHHHHHHHHHHHhc
Q 021783 285 SVGIE----DVNDLISDLDKALRT 304 (307)
Q Consensus 285 s~~~~----~~~~~i~~l~~~l~~ 304 (307)
|++.. +++++++.|.++++.
T Consensus 381 s~~~~~t~~~i~~~~~~l~~~~~~ 404 (406)
T 1kmj_A 381 SLAMYNTHEEVDRLVTGLQRIHRL 404 (406)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EeecCCCHHHHHHHHHHHHHHHHh
Confidence 99964 566666666666543
No 55
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.95 E-value=3.4e-27 Score=207.76 Aligned_cols=259 Identities=16% Similarity=0.123 Sum_probs=177.4
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.+|.+ |++++++.+++++++|++++|+||||
T Consensus 113 al~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG 188 (406)
T 1xi9_A 113 ALQLIFGALLDPGDEILVPGPSYPPYT----GLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTG 188 (406)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCccHH----HHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCC
Confidence 44 445557899999999999998877 5566789999888763 78999999998899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC----CccC--CCc-cEEEeccccccccCCCceeEEEE--EcCh---
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPLE--LGA-DIVMHSATKFIAGHSDVMAGVLA--VKGE--- 139 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~----~~~~--~~~-d~~~~s~~K~~~g~~g~~~G~~~--~~~~--- 139 (307)
.+++ +++|.++|++||+++|+|++|+.+... .... .+. +++++|+||++ +++|+|+|+++ .+++
T Consensus 189 ~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~ 267 (406)
T 1xi9_A 189 ALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVY-FATGWRLGYMYFVDPENKLS 267 (406)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTT-CCGGGCCEEEEEECTTCTTH
T ss_pred CCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEecccccc-CCCccEEEEEEEecCchhHH
Confidence 9976 999999999999999999999864331 1112 367 89999999999 56788999998 7651
Q ss_pred hHHHHHHHHHHhcCCCCChhhHHHHhhccc----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhh
Q 021783 140 RLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 215 (307)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 215 (307)
.+.+.+....... ...+...+..+...++ .++...+...++.+.+.+.|++.+++ .+. .
T Consensus 268 ~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--------------~~~--~ 330 (406)
T 1xi9_A 268 EVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGI--------------STT--K 330 (406)
T ss_dssp HHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTE--------------ECC--C
T ss_pred HHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCC--------------eee--c
Confidence 4555554444333 3344444444444442 23334455556666666777654322 111 0
Q ss_pred ccCCCceEEEEeCC--HHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CC
Q 021783 216 AKGAGSVLSFLTGS--LALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--ED 290 (307)
Q Consensus 216 ~~~~~~~~~~~~~~--~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~ 290 (307)
...+.++++.++. ..+..++.+.+. .+||.++.|..|.. ..++++|||++. ++
T Consensus 331 -~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~---------------------~~~~~lRis~~~~~~~ 388 (406)
T 1xi9_A 331 -PQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGE---------------------YGAGHFRAVFLPPIEI 388 (406)
T ss_dssp -CCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCG---------------------GGTTBEEEECCSCHHH
T ss_pred -CCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCC---------------------CCCCEEEEEecCCHHH
Confidence 0113334446642 123667777775 78998888765321 025679999984 56
Q ss_pred hHHHHHHHHHHHhcC
Q 021783 291 VNDLISDLDKALRTG 305 (307)
Q Consensus 291 ~~~~i~~l~~~l~~~ 305 (307)
+++.++.|.++++++
T Consensus 389 i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 389 LEEAMDRFEKFMKER 403 (406)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH
Confidence 677777777777653
No 56
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.95 E-value=9e-27 Score=204.32 Aligned_cols=259 Identities=17% Similarity=0.129 Sum_probs=177.8
Q ss_pred HH-HHHHHhcCCC-----CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCC
Q 021783 3 AL-AAVTHLLGTG-----EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPT 70 (307)
Q Consensus 3 al-~~~~~~~~~g-----d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~ 70 (307)
|+ .++.+++++| |+|+++.|+|.++. ..++..|++++.++.+ |+++++++++++++++++++|+
T Consensus 103 al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~ 178 (396)
T 3jtx_A 103 ALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYE----GATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPN 178 (396)
T ss_dssp HHHHHHHHHCCC---CCCCEEEEEESCCHHHH----HHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSC
T ss_pred HHHHHHHHHhCCCCccCCCEEEEcCCCcHhHH----HHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEECCC
Confidence 45 4455678886 79999999998877 5567789999999863 7788888888889999999999
Q ss_pred CCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----Cc--------cCCCccEEEeccccccccCCCceeEEE
Q 021783 71 NPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RP--------LELGADIVMHSATKFIAGHSDVMAGVL 134 (307)
Q Consensus 71 n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~--------~~~~~d~~~~s~~K~~~g~~g~~~G~~ 134 (307)
||||.+++ +++|+++|++||+++|+|++|+..... .. ...+.++++.|+||.+ +.+|+|+|++
T Consensus 179 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~ 257 (396)
T 3jtx_A 179 NPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRS-NVPGLRSGFV 257 (396)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTS-SCGGGCCEEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEecccccc-CCcccceEEE
Confidence 99999987 555999999999999999999853321 11 1257899999999988 5678999999
Q ss_pred EEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccc---cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHH
Q 021783 135 AVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 211 (307)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~ 211 (307)
+.++ .+.+.+.......+...+...+..+...++ .+....+.+.++.+.+.+.+++... + .
T Consensus 258 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~-------~----- 321 (396)
T 3jtx_A 258 AGDA-ELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFD---V-------K----- 321 (396)
T ss_dssp EECH-HHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTTSC---C-------C-----
T ss_pred EeCH-HHHHHHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCC---c-------c-----
Confidence 8864 455555555555555555555555544442 3344445555666666666654310 0 0
Q ss_pred HhhhccCCCceEEEEeCCHHHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--
Q 021783 212 HYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-- 288 (307)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-- 288 (307)
. ...+.++++.++.. ....+.+.| +++||.+++|..|...... .+..++++|||++.
T Consensus 322 ---~-~~~~~~~~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~~---------------~~~~~~~iRis~~~~~ 381 (396)
T 3jtx_A 322 ---L-PDASFYIWLKVPDG-DDLAFARNLWQKAAIQVLPGRFLARDTEQ---------------GNPGEGYVRIALVADV 381 (396)
T ss_dssp ---C-CSSSSEEEEECTTS-CHHHHHHHHHHHHCEECEEGGGGCCCCTT---------------CCTTTTEEEEECCSCH
T ss_pred ---C-CCeeEEEEEECCCC-CHHHHHHHHHHHCCEEEeCChHhCCcccc---------------cCCCCCeEEEEEcCCH
Confidence 0 11356777787653 356666766 5569999988874421100 12246889999986
Q ss_pred CChHHHHHHHHHHH
Q 021783 289 EDVNDLISDLDKAL 302 (307)
Q Consensus 289 ~~~~~~i~~l~~~l 302 (307)
+++++.++.|.+++
T Consensus 382 ~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 382 ATCVKAAEDIVSLY 395 (396)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 45555566655543
No 57
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.95 E-value=7.4e-27 Score=206.00 Aligned_cols=258 Identities=13% Similarity=0.097 Sum_probs=179.0
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.++.+ |++++++++++++++|++++|+||||
T Consensus 111 a~~~~~~~~~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG 186 (412)
T 2x5d_A 111 GLAHLMLATLDHGDTILVPNPSYPIHI----YGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTA 186 (412)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTC
T ss_pred HHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCC
Confidence 44 445557899999999999998887 4556679999998874 46888888888899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----CccC----CCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~~~----~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
.+++ +++|.++|++||+++|+|++|+.+... .... .+.+++++|+||++ |.+|+|+|+++++++ +.
T Consensus 187 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~-~~ 264 (412)
T 2x5d_A 187 QCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSY-NMAGWRIGFMVGNPE-LV 264 (412)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CC-SCTTSCCEEEEECHH-HH
T ss_pred CcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCcccc-CCcccceEEEEcCHH-HH
Confidence 9986 789999999999999999999864321 1122 36899999999999 667889999999744 55
Q ss_pred HHHHHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 143 KELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+.+...........+...+..+...++. +....+...++.+.+.+.|++. ++ .-. . ..
T Consensus 265 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~--------~~~--------~-~~ 326 (412)
T 2x5d_A 265 SALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA-GW--------MVE--------N-PK 326 (412)
T ss_dssp HHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH-TC--------CCC--------C-CS
T ss_pred HHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CC--------Eec--------C-CC
Confidence 5555544444444555555544444432 3444555566666677777643 11 101 0 11
Q ss_pred CCceEEEEeCCHH---HHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChH
Q 021783 219 AGSVLSFLTGSLA---LSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVN 292 (307)
Q Consensus 219 ~~~~~~~~~~~~~---~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~ 292 (307)
.+.++++.++... +...+.+.|. .+||.++.|..|.. ..++++|||++. ++++
T Consensus 327 ~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~---------------------~~~~~iRis~~~~~~~l~ 385 (412)
T 2x5d_A 327 ASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGD---------------------YGDDHVRFALIENRDRLR 385 (412)
T ss_dssp BSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGCG---------------------GGTTEEEEECCSCHHHHH
T ss_pred eeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhCC---------------------CCCCeEEEEecCCHHHHH
Confidence 2446677775321 3667777774 46999988765321 025679999986 5677
Q ss_pred HHHHHHHHHHhcC
Q 021783 293 DLISDLDKALRTG 305 (307)
Q Consensus 293 ~~i~~l~~~l~~~ 305 (307)
+.++.|.+++++.
T Consensus 386 ~~l~~l~~~l~~~ 398 (412)
T 2x5d_A 386 QAVRGIKAMFRAD 398 (412)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 7777777777643
No 58
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.95 E-value=9.7e-27 Score=203.84 Aligned_cols=256 Identities=16% Similarity=0.142 Sum_probs=179.9
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|+++.|+|.++. ..++..|++++.++.+ |++++++. ++++|++++|+||||
T Consensus 103 al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---~~~~v~i~~p~nptG 175 (391)
T 3h14_A 103 GFLLAFTALFDSGDRVGIGAPGYPSYR----QILRALGLVPVDLPTAPENRLQPVPADFAGL---DLAGLMVASPANPTG 175 (391)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---CCSEEEEESSCTTTC
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCccHH----HHHHHcCCEEEEeecCcccCCCCCHHHHHhc---CCeEEEECCCCCCCC
Confidence 45 455567899999999999998887 5567789999999874 77888776 789999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCc----CCccC-CCccEEEeccccccccCCCceeEEEEEcChhHHHHHH
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVL----SRPLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 146 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~----~~~~~-~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~ 146 (307)
.+++ +++|+++|++||+++|+|++|+.... ..... .+.+++++|+||++ |++|+++|+++++++ +.+.+.
T Consensus 176 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~-~~~~~~ 253 (391)
T 3h14_A 176 TMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYF-SMTGWRVGWMVVPED-QVRVVE 253 (391)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTT-CCTTSCCEEEECCGG-GHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhcc-CCccceeEEEEeCHH-HHHHHH
Confidence 9997 88999999999999999999984332 12222 36789999999999 677999999999865 545555
Q ss_pred HHHHhcCCCCChhhHHHHhhccc---cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceE
Q 021783 147 FLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 223 (307)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 223 (307)
..........+...+..+...++ .+....+.+.++.+.+.+.+++.+.. .. . . ...+.++
T Consensus 254 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~-------~--------~-~~~~~~~ 316 (391)
T 3h14_A 254 RIAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGFT-RI-------A--------P-PDGAFYV 316 (391)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCC-CB-------C--------C-CCBTTEE
T ss_pred HHHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCC-cc-------c--------C-CCeeEEE
Confidence 55554444555555555444443 34445556666666777777654211 00 0 0 1123456
Q ss_pred EEEeCC-HHHHHHHHhcCCc-ceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHH
Q 021783 224 SFLTGS-LALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLD 299 (307)
Q Consensus 224 ~~~~~~-~~~~~~~~~~l~~-~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~ 299 (307)
++.++. ..+..++.+.+.. +||.+++|..|.. +..++++|+|++. +++++.++.|.
T Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--------------------~~~~~~iRis~~~~~~~i~~~l~~l~ 376 (391)
T 3h14_A 317 YADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDP--------------------ERGAGTLRFSYARATADIEEGLDRLE 376 (391)
T ss_dssp EEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCT--------------------TTGGGEEEEECCSCHHHHHHHHHHHH
T ss_pred EEecCccCCCHHHHHHHHHHHCCEEEcCchhhCC--------------------CCCCCeEEEEecCCHHHHHHHHHHHH
Confidence 666653 2236777777655 4999988876431 0125679999986 56777777777
Q ss_pred HHHhc
Q 021783 300 KALRT 304 (307)
Q Consensus 300 ~~l~~ 304 (307)
+++++
T Consensus 377 ~~~~~ 381 (391)
T 3h14_A 377 AFMQA 381 (391)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 59
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.95 E-value=2.1e-26 Score=204.12 Aligned_cols=262 Identities=18% Similarity=0.133 Sum_probs=179.8
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC---------------CChHHHHhhcCCCceEEEE
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---------------CDLDEVASAIGPWTKLVWV 66 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------------~d~~~l~~~l~~~~~~v~~ 66 (307)
|+ .++.+++++||+|+++.|+|+++. ..++..|++++.+|. .|++++++.+++++++|++
T Consensus 113 a~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~ 188 (429)
T 1yiz_A 113 ALYATIQGHVDEGDEVIIIEPFFDCYE----PMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIII 188 (429)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEE
Confidence 44 455567899999999999999887 455678999988875 3689999999889999999
Q ss_pred eCCCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCc------C--Cc-cCCCccEEEeccccccccCCCceeEEE
Q 021783 67 ESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL------S--RP-LELGADIVMHSATKFIAGHSDVMAGVL 134 (307)
Q Consensus 67 ~~~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~------~--~~-~~~~~d~~~~s~~K~~~g~~g~~~G~~ 134 (307)
++|+||||.+++ +++|.++|++||+++|+|++|+.... + .. ...++|++++|+||++ +++|+|+|++
T Consensus 189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~-~~~G~r~G~~ 267 (429)
T 1yiz_A 189 NTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTF-SLTGWKIGWA 267 (429)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHH-TCGGGCCEEE
T ss_pred CCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhcc-CCCCcceEEE
Confidence 999999999985 99999999999999999999974221 1 11 1357899999999999 5678999999
Q ss_pred EEcChhHHHHHHHHHHhcCCCCChhhHHHHhhcccc-----------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCC
Q 021783 135 AVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-----------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL 203 (307)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l 203 (307)
+++++ +.+.+...........+...+..+...++. +....+...++.+.+.+.|++. ++ .+..
T Consensus 268 ~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~--- 341 (429)
T 1yiz_A 268 YGPEA-LLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GM-NPTV--- 341 (429)
T ss_dssp ESCHH-HHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TC-EEEE---
T ss_pred EeCHH-HHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CC-cccC---
Confidence 99754 555555444433333444434333333322 3333444555666666666643 11 1111
Q ss_pred CCCCchHHHhhhccCCCceEEEEeCCH------------HHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHH
Q 021783 204 PEHPGHELHYSQAKGAGSVLSFLTGSL------------ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVE 270 (307)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~ 270 (307)
...+.++++.+++. ....++.+.+. ++||.+++|..|... +
T Consensus 342 -------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~--~----------- 395 (429)
T 1yiz_A 342 -------------PQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSE--P----------- 395 (429)
T ss_dssp -------------CSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCG--G-----------
T ss_pred -------------CCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCC--c-----------
Confidence 11355777887542 23567777764 689999887653210 0
Q ss_pred HHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 021783 271 VRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 304 (307)
Q Consensus 271 ~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 304 (307)
..+..++++|||++. +++++.++.|.+++++
T Consensus 396 ---~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 428 (429)
T 1yiz_A 396 ---NKHLGEDFVRYCFFKKDENLQKAAEILRKWKGS 428 (429)
T ss_dssp ---GGGGTTTEEEEECCSCHHHHHHHHHHHHHHSCC
T ss_pred ---ccCCCCCeEEEEecCCHHHHHHHHHHHHHhccC
Confidence 001125789999985 5677777777777654
No 60
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.95 E-value=6.3e-27 Score=207.95 Aligned_cols=264 Identities=14% Similarity=0.102 Sum_probs=184.9
Q ss_pred HH-HHHHHhc--CCCC--eEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhc-CCCceEEEEeCCC
Q 021783 3 AL-AAVTHLL--GTGE--EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAI-GPWTKLVWVESPT 70 (307)
Q Consensus 3 al-~~~~~~~--~~gd--~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l-~~~~~~v~~~~~~ 70 (307)
|+ .++.+++ ++|| +|+++.|+|.++. ..++..|++++.++.+ |++++++++ ++++++|++++|+
T Consensus 117 al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~ 192 (437)
T 3g0t_A 117 GCFVSFLVANRTHKNREYGTLFIDPGFNLNK----LQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPN 192 (437)
T ss_dssp HHHHHHHHHTTSCTTCSCCEEEEESCCHHHH----HHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSC
T ss_pred HHHHHHHHHhcCCCCCccEEEEeCCCcHhHH----HHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCC
Confidence 45 3445567 9999 9999999998887 5566789999999874 789999999 6889999999999
Q ss_pred CCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCc-------------CCcc-CCCccEEEeccccccccCCCceeEE
Q 021783 71 NPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL-------------SRPL-ELGADIVMHSATKFIAGHSDVMAGV 133 (307)
Q Consensus 71 n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-------------~~~~-~~~~d~~~~s~~K~~~g~~g~~~G~ 133 (307)
||||.+++ +++|+++|++||+++|+|++|+.... .... ..+.+++++|+||++ +++|+++|+
T Consensus 193 nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~ 271 (437)
T 3g0t_A 193 NPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAF-SYAGQRIGV 271 (437)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTT-SCGGGCCEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCC-CCccceeEE
Confidence 99999986 77889999999999999999974322 1111 257889999999999 667899999
Q ss_pred EEEcChhHHHH-----------------HHHHHHhcCCCCChhhHHHHhhcccc-------HHHHHHHHHHHHHHHHHHH
Q 021783 134 LAVKGERLAKE-----------------LYFLQNAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFL 189 (307)
Q Consensus 134 ~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~l~~~l 189 (307)
++++++...+. +...........+...+..+...++. +....+.+.++.+.+.+.|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 351 (437)
T 3g0t_A 272 LMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMF 351 (437)
T ss_dssp EEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99985533303 33333333344455555555444432 4555666777777888888
Q ss_pred hcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcH
Q 021783 190 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 269 (307)
Q Consensus 190 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~ 269 (307)
++. ++ .+..+. + ...+...+.++++.+++. +...+.+.|..+||.+++|..+..
T Consensus 352 ~~~-g~-~~~~~~--~-------~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~gi~v~~~~~~~~-------------- 405 (437)
T 3g0t_A 352 LDN-GF-NIVYDK--D-------GNEPLADGFYFTVGYKGM-DSSKLIEKFVRYGMCAITLKTTGS-------------- 405 (437)
T ss_dssp HTT-TE-EESSCE--E-------TTEECCSSSEEEEEETTC-CHHHHHHHHHHTTEECEESTTTTC--------------
T ss_pred HHc-CC-EEeccc--c-------CCCCCceeEEEEEecCCC-CHHHHHHHHHHcCeEEeeccccCC--------------
Confidence 765 22 111000 0 000112466778888743 377888888888999987765321
Q ss_pred HHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHhc
Q 021783 270 EVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRT 304 (307)
Q Consensus 270 ~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~ 304 (307)
..++++|||++. +++++.++.|.+++++
T Consensus 406 -------~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 406 -------KRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp -------CCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred -------CCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 013679999985 6788888888877653
No 61
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.95 E-value=1.6e-26 Score=204.41 Aligned_cols=262 Identities=15% Similarity=0.102 Sum_probs=182.3
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----------------ChHHHHhhcCCCceEE
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----------------DLDEVASAIGPWTKLV 64 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----------------d~~~l~~~l~~~~~~v 64 (307)
|+ .++..++++||+|+++.|+|.++. ..++..|++++.++.+ |++++++.+++++++|
T Consensus 103 a~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v 178 (422)
T 3fvs_A 103 ALFTAFQALVDEGDEVIIIEPFFDCYE----PMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKAL 178 (422)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEE
T ss_pred HHHHHHHHHcCCCCEEEEcCCCchhhH----HHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEE
Confidence 44 455567899999999999999887 5566789999888763 7899999999899999
Q ss_pred EEeCCCCCccccc---cHHHHHHHHHHcCCEEEEeCccCCCCcC-----Cc----cCCCccEEEeccccccccCCCceeE
Q 021783 65 WVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS-----RP----LELGADIVMHSATKFIAGHSDVMAG 132 (307)
Q Consensus 65 ~~~~~~n~tG~~~---~~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~----~~~~~d~~~~s~~K~~~g~~g~~~G 132 (307)
++++|+||||.++ ++++|.++|++||+++|+|++|+..... .. ...+.+++++|+||.+ |.+|+|+|
T Consensus 179 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G 257 (422)
T 3fvs_A 179 VLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTF-SATGWKVG 257 (422)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHH-TCGGGCCE
T ss_pred EECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhcc-CCccceEE
Confidence 9999999999999 5999999999999999999999742211 11 1236779999999999 67789999
Q ss_pred EEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccc-----------cHHHHHHHHHHHHHHHHHHHhcCCCccEEecC
Q 021783 133 VLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 201 (307)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 201 (307)
+++++++ +.+.+...........+...+..+...++ .+....+.+.++.+.+.+.|++. ++ .+..+
T Consensus 258 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~ 334 (422)
T 3fvs_A 258 WVLGPDH-IMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GL-KPIIP 334 (422)
T ss_dssp EEECCHH-HHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT-TC-EEEBC
T ss_pred EEEeCHH-HHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc-CC-eecCC
Confidence 9998755 44445544444444445544444444332 23445566667777777777765 22 11111
Q ss_pred CCCCCCchHHHhhhccCCCceEEEEeCCHHH-------------HHHHHhc-CCcceeecCCCCccceeecccccCCCCC
Q 021783 202 GLPEHPGHELHYSQAKGAGSVLSFLTGSLAL-------------SKHVVET-TKYFSITVSFGSVKSLISMPCFMSHASI 267 (307)
Q Consensus 202 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~-l~~~gi~v~~g~~~~~~~~p~~~~~~~~ 267 (307)
..+.++++.+..... ..++.+. ++++||.+.+|+.|... +
T Consensus 335 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~--~-------- 388 (422)
T 3fvs_A 335 ----------------QGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSV--P-------- 388 (422)
T ss_dssp ----------------SBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCH--H--------
T ss_pred ----------------CeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCC--c--------
Confidence 134566666532110 3345554 45579999888764311 0
Q ss_pred cHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 021783 268 PVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 304 (307)
Q Consensus 268 ~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 304 (307)
.....++++|||++. +++++.++.|.+++++
T Consensus 389 ------~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 389 ------HQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp ------HHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred ------CCCCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 011246889999986 6778888888888765
No 62
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.95 E-value=1.8e-26 Score=204.47 Aligned_cols=254 Identities=15% Similarity=0.195 Sum_probs=182.1
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCC----CceEEEEeCCCCCccccccHH
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP----WTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~----~~~~v~~~~~~n~tG~~~~~~ 80 (307)
.++.+++++||+|+++.+.|+++. ..++..|++++.++..|++++++.+++ ++++|++++++||+|.+.|++
T Consensus 139 ~al~~l~~~gd~vl~~~~~h~~~~----~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~ 214 (427)
T 2w8t_A 139 GIISTLAGKGEYVILDADSHASIY----DGCQQGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLK 214 (427)
T ss_dssp HHHHHHSCTTCEEEEETTCCHHHH----HHHHHSCSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHH
T ss_pred HHHHHhcCCCCEEEECCcccHHHH----HHHHHcCCeeEEeCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHH
Confidence 455667899999999999998887 445677999999999999999999864 789999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcCC---------ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH-HH
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QN 150 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~~---------~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~-~~ 150 (307)
+|.++|++||+++|+|++|+.+.... ....++|++++|+||++ |++ +|+++++++... .+... ..
T Consensus 215 ~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~-g~~---gG~v~~~~~l~~-~l~~~~~~ 289 (427)
T 2w8t_A 215 EMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSV-GTV---GGFVVSNHPKFE-AVRLACRP 289 (427)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTT-CSC---CEEEEECCTTGG-GGGGTCHH
T ss_pred HHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhh-ccC---CCEEEeCHHHHH-HHHHhccc
Confidence 99999999999999999998765431 11235799999999999 455 599999865433 22221 11
Q ss_pred -hcCCCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 151 -AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 151 -~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
......++.....+..+++.+ ....++..++.+.+.+.|++. ++ .+..+ ...++++++.
T Consensus 290 ~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~---------------~~~~~~~~~~ 352 (427)
T 2w8t_A 290 YIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM-GF-RLGTE---------------TCDSAIVAVM 352 (427)
T ss_dssp HHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH-TC-EESCS---------------SCCSSEEEEE
T ss_pred ccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CC-cccCC---------------CCCCCEEEEE
Confidence 123344444444444444333 455666777777777777654 11 11000 1136788898
Q ss_pred eCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHH
Q 021783 227 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKAL 302 (307)
Q Consensus 227 ~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l 302 (307)
+++......+.+.|..+||.++.|..+.. ....+++|++++. ++++++++.|.+++
T Consensus 353 ~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~--------------------~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l 412 (427)
T 2w8t_A 353 LEDQEQAAMMWQALLDGGLYVNMARPPAT--------------------PAGTFLLRCSICAEHTPAQIQTVLGMFQAAG 412 (427)
T ss_dssp ESSHHHHHHHHHHHHHTTEECEEECTTTS--------------------CTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHCCeEEeeeCCCCC--------------------CCCCeEEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 87765678888888888998887654221 0124679999985 56777777777766
Q ss_pred hc
Q 021783 303 RT 304 (307)
Q Consensus 303 ~~ 304 (307)
++
T Consensus 413 ~~ 414 (427)
T 2w8t_A 413 RA 414 (427)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 63
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.95 E-value=8.3e-27 Score=205.22 Aligned_cols=258 Identities=19% Similarity=0.112 Sum_probs=177.0
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHH
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
+++||+|++++++|+++...+...++..|++++.++.+ |++++++.+++++++|++++++||||.+.|+++|.+
T Consensus 110 ~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~ 189 (406)
T 3cai_A 110 AGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTK 189 (406)
T ss_dssp GBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCCCHHHHH
T ss_pred cCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCCHHHHHH
Confidence 68999999999999988766665555579999999875 899999999989999999999999999999999999
Q ss_pred HHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeE-EEEEcChhHHHHHHHHH---------HhcC
Q 021783 85 MAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAG-VLAVKGERLAKELYFLQ---------NAEG 153 (307)
Q Consensus 85 ~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G-~~~~~~~~~~~~~~~~~---------~~~~ 153 (307)
+|+++|+++|+|++|+.+..+ +...++.|++++|+||++ |+ + +| +++++++ +.+.+.... ....
T Consensus 190 l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~~-g~-~--~G~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~ 264 (406)
T 3cai_A 190 LVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWG-GP-P--IGAMVFRDPS-VMNSFGSVSTNPYATGPARLEI 264 (406)
T ss_dssp HHHHTTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGGT-SC-S--CEEEEESCHH-HHHTSCCCCSCTTCCGGGGGCC
T ss_pred HHHHcCCEEEEEcccccCCCCCCchhcCCCEEEeehhhhc-CC-C--cCeEEEEehH-HHhhcCCcccCCCCCccccccC
Confidence 999999999999999987654 445568999999999988 54 3 67 9988754 333222111 0111
Q ss_pred CCCChhhHHHHhhcccc-------------------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhh
Q 021783 154 SGLAPFDCWICLRGVKT-------------------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 154 ~~~~~~~~~~~~~~l~~-------------------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 214 (307)
.+.+.........+++. ++...++..++.+.+.+.|++.+++ .+..+
T Consensus 265 ~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~------------- 330 (406)
T 3cai_A 265 GVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLV-MLIGR------------- 330 (406)
T ss_dssp SCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTE-EECCC-------------
T ss_pred CCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCe-EEcCC-------------
Confidence 22222222222222221 3334445556666677777655432 11111
Q ss_pred hccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCC--CCCeEEEEeccCChH
Q 021783 215 QAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL--TEDLVRISVGIEDVN 292 (307)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~iRis~~~~~~~ 292 (307)
. ...+++++|.+++.+ ..++.+.|..+||.++.|..... ....|. .++++|+|++....+
T Consensus 331 ~-~~~~~~~~~~~~~~~-~~~~~~~L~~~gi~v~~g~~~~~----------------~~~~g~~~~~~~iRis~~~~~t~ 392 (406)
T 3cai_A 331 P-EAQIPVVSFAVHKVP-ADRVVQRLADNGILAIANTGSRV----------------LDVLGVNDVGGAVTVGLAHYSTM 392 (406)
T ss_dssp C-SSBCSEEEEEETTBC-HHHHHHHHHHTTEECEECCSCHH----------------HHHHTTTTTTCCEEEECCTTCCH
T ss_pred c-cccCCEEEEEECCcC-HHHHHHHHHHCCcEEecCChHHH----------------HHHcCCCCCCCeEEEEeecCCCH
Confidence 0 113457888886533 66777778778998887762110 111222 247899999987777
Q ss_pred HHHHHHHHHHhcC
Q 021783 293 DLISDLDKALRTG 305 (307)
Q Consensus 293 ~~i~~l~~~l~~~ 305 (307)
+.++.+.+.|+++
T Consensus 393 e~i~~~~~~l~~~ 405 (406)
T 3cai_A 393 AEVDQLVRALASL 405 (406)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHh
Confidence 7777777777654
No 64
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.95 E-value=2e-26 Score=202.32 Aligned_cols=228 Identities=17% Similarity=0.153 Sum_probs=180.2
Q ss_pred HH-HHHHHhcCCCCeEEEcC-CCCcchHHHH-------hhhcccCCcEEEEecC-----CChHHHHhhcC--CCceEEEE
Q 021783 3 AL-AAVTHLLGTGEEIVAGD-DLYGGTDRLL-------SRVTPKTGVVVKRVNT-----CDLDEVASAIG--PWTKLVWV 66 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~-~~~~~~~~~~-------~~~~~~~g~~~~~v~~-----~d~~~l~~~l~--~~~~~v~~ 66 (307)
|+ .++.++++|||+|++++ +.|.++...+ ...++..|++++.+|. .|+++++++++ ++|++|++
T Consensus 103 Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i 182 (427)
T 3i16_A 103 ALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHI 182 (427)
T ss_dssp HHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEE
Confidence 45 56667899999999999 9998887555 1456778999999998 58999999998 89999999
Q ss_pred eC----CCCCccccccHHHHHHHHHH--cCCEEEEeCccCCCC-cCCccCCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 67 ES----PTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 67 ~~----~~n~tG~~~~~~~l~~~~~~--~~~~li~D~a~~~~~-~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
++ |+||+|.+.|+++|.++|++ +|+++++|++|+.+. ...+...++|++++|+||+++|+...++|+++++++
T Consensus 183 ~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~ 262 (427)
T 3i16_A 183 QRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKD 262 (427)
T ss_dssp ECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHH
T ss_pred EcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCccccCCeEEEecCcccCCCCCCceEEEEEECHH
Confidence 99 99999999999999999999 999999999999887 446777899999999999996643356899999855
Q ss_pred hHHHHHHHHH--HhcCCCCCh-hh-HHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhh
Q 021783 140 RLAKELYFLQ--NAEGSGLAP-FD-CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 215 (307)
Q Consensus 140 ~~~~~~~~~~--~~~~~~~~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 215 (307)
+.+.+.... ...+....+ .. ++++..+++.+..+.++..+++..+.++|+.++. .+ +++ .+.|.
T Consensus 263 -li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~~~~~r~~~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~------- 330 (427)
T 3i16_A 263 -CIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLFLAPHISMEALKGAILCSRIMELAGF--EV-MPK-YDEKR------- 330 (427)
T ss_dssp -HHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCC-------
T ss_pred -HHHHHHHhcccCccCccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--ee-cCC-CCCCC-------
Confidence 444444422 222222222 33 7888889998899999999999999999998864 33 554 33322
Q ss_pred ccCCCceEEEEeCCHHHHHHHHhcCCccee
Q 021783 216 AKGAGSVLSFLTGSLALSKHVVETTKYFSI 245 (307)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 245 (307)
..-++.|.+++.+.+..+.+.|+....
T Consensus 331 ---~~~i~~i~l~~~~~~~~f~~~l~~~~~ 357 (427)
T 3i16_A 331 ---SDIIQSIKFNDKDKLIEFCKGIQTGSP 357 (427)
T ss_dssp ---SSSCEEEECSSHHHHHHHHHHHHHTCS
T ss_pred ---ccEEEEEEECCHHHHHHHHHHHhhcCc
Confidence 233888999888888999999887644
No 65
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.95 E-value=3.2e-27 Score=206.03 Aligned_cols=272 Identities=18% Similarity=0.146 Sum_probs=179.5
Q ss_pred HHHHHhc----CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccc
Q 021783 5 AAVTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 5 ~~~~~~~----~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~ 75 (307)
.++.++. ++||+|++++++|+++...+.. ++..|++++.++.+ |++++++.+++++++|++++++||||.
T Consensus 75 ~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~ 153 (382)
T 4eb5_A 75 LAIIGYAMRNARKGKHILVSAVEHMSVINPAKF-LQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGT 153 (382)
T ss_dssp HHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHH-HTTTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCB
T ss_pred HHHHHHHhhccCCCCEEEECCCcchHHHHHHHH-HHhCCcEEEEeccCCCCccCHHHHHHHhcCCCeEEEEeccCCCccc
Confidence 3444555 8999999999999888755542 34579999999873 899999999988999999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChh-HHHHHHH---HHH
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKELYF---LQN 150 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~-~~~~~~~---~~~ 150 (307)
+.|+++|.++|++||++ |+|++|+.+..+ +...++.|++++|+||++ |++| .|+++++++. +...... ...
T Consensus 154 ~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~sK~~-g~~g--~G~~~~~~~~~l~~~~~~~~~~~~ 229 (382)
T 4eb5_A 154 IQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSNDIY-GPKG--VGALWIRKEAKLQPVILGGGQENG 229 (382)
T ss_dssp BCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEETGGGT-CCSS--CEEEEEETTCCCCCSSCSSCTGGG
T ss_pred cCCHHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEEEeehHHhc-CCCc--eEEEEEccccccCceecCCCcccc
Confidence 99999999999999999 999999976544 334457899999999986 6777 7888888663 2111000 001
Q ss_pred hcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 151 AEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 151 ~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
....+.+.........+++. +....++..++.+.+.+.|++.+++ .+..+ .....+++++|.
T Consensus 230 ~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~-------------~~~~~~~~~~~~ 295 (382)
T 4eb5_A 230 LRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEES-YLNGH-------------PEKRLPNNVNVR 295 (382)
T ss_dssp TSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTE-EECSC-------------SSSBCTTEEEEE
T ss_pred ccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCCe-EEeCC-------------cccCCCCEEEEE
Confidence 11122222233333333332 2333444555666666666654332 11110 001125678888
Q ss_pred eCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC----CCeEEEEecc----CChHHHHHHH
Q 021783 227 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGI----EDVNDLISDL 298 (307)
Q Consensus 227 ~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~iRis~~~----~~~~~~i~~l 298 (307)
+++.+ ...+.+.|..+||.++.|..+.... ..+..+....|.+ ++++||+++. ++++++++.|
T Consensus 296 ~~~~~-~~~~~~~l~~~gi~v~~g~~~~~~~--------~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l 366 (382)
T 4eb5_A 296 FSYIE-GESIVLSLDMAGIQASTGSACSSKT--------LQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVL 366 (382)
T ss_dssp ETTSC-HHHHHHHHHHHTCBCBCCCGGGTSS--------CCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHH
T ss_pred eCCcC-HHHHHHHHHHCCEEEeccccccCCC--------CcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHH
Confidence 86433 6678888878899999887643210 0122233344443 6789999984 5677777777
Q ss_pred HHHHhc
Q 021783 299 DKALRT 304 (307)
Q Consensus 299 ~~~l~~ 304 (307)
.+++++
T Consensus 367 ~~~~~~ 372 (382)
T 4eb5_A 367 PGVIER 372 (382)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776643
No 66
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.95 E-value=9e-28 Score=208.79 Aligned_cols=260 Identities=16% Similarity=0.160 Sum_probs=179.2
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEec--CC-----ChHHHHhhcC-----CCceEEEEeCC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN--TC-----DLDEVASAIG-----PWTKLVWVESP 69 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~--~~-----d~~~l~~~l~-----~~~~~v~~~~~ 69 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.++ .+ |++++++.++ +++++|+++++
T Consensus 81 a~~~~~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~ 156 (371)
T 2e7j_A 81 AKFAVMHSLAKKDAWVVMDENCHYSSY----VAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYP 156 (371)
T ss_dssp HHHHHHHHHCCTTCEEEEETTCCHHHH----HHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESS
T ss_pred HHHHHHHHHhCCCCEEEEccCcchHHH----HHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECC
Confidence 44 455567899999999999999888 44677899999999 65 8999999997 78999999999
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH
Q 021783 70 TNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 148 (307)
Q Consensus 70 ~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~ 148 (307)
+||||.+.|+++|.++|++||+++|+|++|+.+..+ +...++.|++++|+||+++++. ++|+++++++.....+...
T Consensus 157 ~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~--~~G~~~~~~~~~~~~~~~~ 234 (371)
T 2e7j_A 157 DGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASG--PIGVMGMKEEWAEIVLRRS 234 (371)
T ss_dssp CTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCS--SCEEEEECTTTTTTTTCBC
T ss_pred CCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcCCCEEEecCCcCCCCCC--CcEEEEEechhhhhhcccc
Confidence 999999999999999999999999999999987764 5555678999999999986654 4899999876433202211
Q ss_pred HH--hc-----CCCCChhhHHHHhhccccHH-HHHHHH--HHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 149 QN--AE-----GSGLAPFDCWICLRGVKTMA-LRVEKQ--QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 149 ~~--~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~--~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
.. .. ....+....+.+..+++.+. ...+.. .++.+.+.+.|++. ++ .+..+. ..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~-~~~~~~--------------~~ 298 (371)
T 2e7j_A 235 EKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKL-GI-KQLGDN--------------PH 298 (371)
T ss_dssp SSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHT-TC-EEESSS--------------SC
T ss_pred ccCcccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-Cc-EEecCC--------------Cc
Confidence 11 01 22233333333334444333 223444 56666777777654 22 111110 11
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEE-EEecc-----CChH
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVR-ISVGI-----EDVN 292 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iR-is~~~-----~~~~ 292 (307)
.++++++.++ ....+.+.|..+||.+.+ ..+... ..|..++++| ++++. ++++
T Consensus 299 ~~~~~~~~~~---~~~~~~~~l~~~gi~~~~-~~~~~~-----------------~~g~~~~~iRii~~~~~~~~~~~i~ 357 (371)
T 2e7j_A 299 NHDLMFFHAE---VLYEISKKAKGGRFFLYR-ELKSRK-----------------IHGIKPGLTRYFKLSTYGLSDEEVD 357 (371)
T ss_dssp CSSEEEEECH---HHHHHHHHSSSGGGHHHH-HHHHTT-----------------EECSCTTCCSEEEEECTTCCHHHHH
T ss_pred cCceEEEECC---CHHHHHHHHHHCCEEEEe-cccccc-----------------ccCCCCCceEEEEeeccCCCHHHHH
Confidence 3568888876 477888889888997754 211000 0022367799 99984 4667
Q ss_pred HHHHHHHHHHhcC
Q 021783 293 DLISDLDKALRTG 305 (307)
Q Consensus 293 ~~i~~l~~~l~~~ 305 (307)
++++.|.++++++
T Consensus 358 ~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 358 YVLNAFKEIIEKY 370 (371)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 7777777776654
No 67
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.95 E-value=1.3e-27 Score=208.68 Aligned_cols=273 Identities=15% Similarity=0.094 Sum_probs=179.6
Q ss_pred HHHHHhc----CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccc
Q 021783 5 AAVTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 5 ~~~~~~~----~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~ 75 (307)
.++.++. ++||+|++++++|+++...+. .++..|++++.+|.+ |++++++.+++++++|++++++||||.
T Consensus 76 ~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~ 154 (384)
T 1eg5_A 76 WILKTVAETFEKRKRTIITTPIEHKAVLETMK-YLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGT 154 (384)
T ss_dssp HHHHHHHHHTTTTCCEEEECTTSCHHHHHHHH-HHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCB
T ss_pred HHHHhhhhhccCCCCEEEECCCCchHHHHHHH-HHHhcCCEEEEEccCCCCccCHHHHHHHhCCCCeEEEEECCCCCccc
Confidence 3444555 799999999999988765443 235679999999873 889999999989999999999999999
Q ss_pred cccHHHHHHHHHHcC--CEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChh-HHHHHHHH---
Q 021783 76 ICDIRKIAEMAHAHG--ALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKELYFL--- 148 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~--~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~-~~~~~~~~--- 148 (307)
+.|+++|.++|++|| +++|+|++|+.+..+ +...++.|++++|+||++ |++| +|+++++++. +...+...
T Consensus 155 ~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~-g~~G--~G~~~~~~~~~~~~~~~~~~~~ 231 (384)
T 1eg5_A 155 IQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFH-GPKG--VGITYIRKGVPIRPLIHGGGQE 231 (384)
T ss_dssp BCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGT-SCTT--CEEEEECTTSCCCCSBCSSCTT
T ss_pred ccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHHhc-CCCc--eEEEEEcCCCccccccccCccc
Confidence 999999999999999 999999999866544 444557999999999987 6777 7999998763 11111100
Q ss_pred HHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 149 QNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
......+.+...+..+..+++. +....+...++.+.+.+.|++ .++ .+..+ .....+.+++
T Consensus 232 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~-~~~~~-------------~~~~~~~~~~ 296 (384)
T 1eg5_A 232 RGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMN-LGA-HIITP-------------LEISLPNTLS 296 (384)
T ss_dssp TTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT-TTC-EECSC-------------TTSBCTTEEE
T ss_pred ccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC-CCe-EEeCC-------------cccCCCCEEE
Confidence 0011223333344433344432 334455556666677777765 222 11111 0011245777
Q ss_pred EEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC----CCeEEEEecc----CChHHHHH
Q 021783 225 FLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGI----EDVNDLIS 296 (307)
Q Consensus 225 ~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~iRis~~~----~~~~~~i~ 296 (307)
|.+.+.+ ...+.+.|..+||.++.|..+.... . .+.......|.+ ++++||+++. ++++++++
T Consensus 297 ~~~~~~~-~~~~~~~l~~~gi~v~~g~~~~~~~---~-----~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~ 367 (384)
T 1eg5_A 297 VSFPNIR-GSTLQNLLSGYGIYVSTSSACTSKD---E-----RLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLK 367 (384)
T ss_dssp EECTTCC-HHHHHHHHHHTTEECBC--------------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHH
T ss_pred EEeCCCC-HHHHHHHHhhCCeEEeccccccCCC---C-----cchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHH
Confidence 7776433 6678888888999999887542110 0 011122233432 4789999983 68888888
Q ss_pred HHHHHHhcC
Q 021783 297 DLDKALRTG 305 (307)
Q Consensus 297 ~l~~~l~~~ 305 (307)
.|.++++++
T Consensus 368 ~l~~~~~~~ 376 (384)
T 1eg5_A 368 KIEEILSFL 376 (384)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHH
Confidence 888887654
No 68
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.95 E-value=2.3e-26 Score=202.64 Aligned_cols=259 Identities=17% Similarity=0.171 Sum_probs=179.0
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCC------hHHHHhhcCCCceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCD------LDEVASAIGPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d------~~~l~~~l~~~~~~v~~~~~~n~tG~ 75 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.++.++ ++++++.+++++++|++++|+||||.
T Consensus 114 a~~~~~~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~~~~~v~~~~p~nptG~ 189 (409)
T 2gb3_A 114 AILFSFAVIANPGDEILVLEPFYANYN----AFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGV 189 (409)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTHHH----HHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCC
T ss_pred HHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHcCCEEEEeccCCCCCCccHHHHHHhhCcCCeEEEECCCCCCCCC
Confidence 44 455567899999999999998887 45667899999998752 78899988888999999999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCccCCCCcC----C-ccC-CCccEEEeccccccccCCCceeEEEEEcChhHHHHHH
Q 021783 76 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----R-PLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 146 (307)
Q Consensus 76 ~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~----~-~~~-~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~ 146 (307)
+++ +++|.++|++||+++|+|++|+.+... . ... .+.|++++|+||++ |++|+++|+++++++.+.+.+.
T Consensus 190 ~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~l~~~l~ 268 (409)
T 2gb3_A 190 VYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKF-SACGARVGCLITRNEELISHAM 268 (409)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTT-TCGGGCCEEEECSCHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhcc-CCccceEEEEEECcHHHHHHHH
Confidence 974 899999999999999999999865431 1 112 36799999999999 6678899999999734555555
Q ss_pred HHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCC-CCchHHHhhhccCCCc
Q 021783 147 FLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE-HPGHELHYSQAKGAGS 221 (307)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~ 221 (307)
....... ..+...+..+...++. ++...+...++.+.+.+.|++. ++ .- . . ...+.
T Consensus 269 ~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~--------~~~~--------~-~~~~~ 329 (409)
T 2gb3_A 269 KLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH-GL--------KRFT--------K-PSGAF 329 (409)
T ss_dssp HHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TC--------CCBC--------C-CSBSS
T ss_pred HHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc-Cc--------eeee--------C-CCeeE
Confidence 4444333 4455555555555532 3333444555666666666653 11 10 0 0 11244
Q ss_pred eEEEEeCCHHHHHHHHhcCCcc------eeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHH
Q 021783 222 VLSFLTGSLALSKHVVETTKYF------SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVND 293 (307)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~l~~~------gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~ 293 (307)
++++.+++. +..++.+.|..+ ||.++.|..|... .+..++++|++++. +++++
T Consensus 330 ~~~~~~~~~-~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~------------------~~~~~~~iRis~~~~~e~i~~ 390 (409)
T 2gb3_A 330 YITAELPVE-DAEEFARWMLTDFNMDGETTMVAPLRGFYLT------------------PGLGKKEIRIACVLEKDLLSR 390 (409)
T ss_dssp EEEEECSSS-CHHHHHHHHHHSCCBTTEEEECEEGGGGCSS------------------TTTTSSEEEEECCSCHHHHHH
T ss_pred EEEEEeCCC-CHHHHHHHHHhccccccCcEEEeCchHhCCC------------------CCCCCCEEEEEeCCCHHHHHH
Confidence 555566532 356677777655 9988877653210 01236789999984 56777
Q ss_pred HHHHHHHHHhc
Q 021783 294 LISDLDKALRT 304 (307)
Q Consensus 294 ~i~~l~~~l~~ 304 (307)
.++.|.+++++
T Consensus 391 ~~~~l~~~l~~ 401 (409)
T 2gb3_A 391 AIDVLMEGLKM 401 (409)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 78888777654
No 69
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.95 E-value=2.5e-26 Score=200.68 Aligned_cols=252 Identities=12% Similarity=0.142 Sum_probs=176.6
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCC---CceEEEEeCCCCCccccccHHH
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP---WTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
.++.+++++||+|++++|.|+++. ..++..|++++.+|..|++++++.+++ +++++++++++||||.+.|+++
T Consensus 114 ~~~~~~~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~ 189 (384)
T 1bs0_A 114 AVIAAMMAKEDRIAADRLSHASLL----EAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAE 189 (384)
T ss_dssp HHHHHHCCTTCEEEEETTCCHHHH----HHHHTSSSEEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHH
T ss_pred HHHHHhCCCCcEEEEcccccHHHH----HHHHHcCCCEEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHH
Confidence 455667899999999999998877 455668999999999999999998864 3789999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCccCCCCcC----C---ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH-HHhc-
Q 021783 82 IAEMAHAHGALLLVDNSIMSPVLS----R---PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QNAE- 152 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~~~~~~~----~---~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~-~~~~- 152 (307)
|.++|++||+++|+|++|+.+... . ....+.|++++|+||++ +++ +|+++++++ +.+.+... ....
T Consensus 190 i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~-~~~---GG~~~~~~~-~~~~l~~~~~~~~~ 264 (384)
T 1bs0_A 190 IQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGF-GVS---GAAVLCSST-VADYLLQFARHLIY 264 (384)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTT-SSC---CEEEEECHH-HHHHHHHHCHHHHS
T ss_pred HHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchh-hcc---CcEEEeCHH-HHHHHHHhchhhhc
Confidence 999999999999999999876531 1 11135799999999999 465 499998744 44444432 1222
Q ss_pred CCCCChhhHHHHhhccccHH-----HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEe
Q 021783 153 GSGLAPFDCWICLRGVKTMA-----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 227 (307)
Q Consensus 153 ~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 227 (307)
+...+...+..+..+++.+. ...+...++.+.+.+.|++.. + .+ . .+.++++++.+
T Consensus 265 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~-~----------------~~~~~~~~~~~ 325 (384)
T 1bs0_A 265 STSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP-F-TL-A----------------DSCSAIQPLIV 325 (384)
T ss_dssp SBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS-C-EE-C----------------SCCSSBCCEEE
T ss_pred CCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC-C-cc-c----------------CCCCCEEEEEe
Confidence 22345555555444444332 344555666666777776541 1 11 0 11356777777
Q ss_pred CCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 021783 228 GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 304 (307)
Q Consensus 228 ~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 304 (307)
++.....++.+.|..+||.++.|..+.. ...++++|++++....++.++.+.+.|++
T Consensus 326 ~~~~~~~~l~~~l~~~gi~v~~~~~~~~--------------------~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~ 382 (384)
T 1bs0_A 326 GDNSRALQLAEKLRQQGCWVTAIRPPTV--------------------PAGTARLRLTLTAAHEMQDIDRLLEVLHG 382 (384)
T ss_dssp ESHHHHHHHHHHHHHTTEECCEECTTSS--------------------CTTCEEECCBCCTTCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCcEEEeecCCCC--------------------CCCCceEEEEEcCCCCHHHHHHHHHHHHh
Confidence 6544577888888888998887654210 11256799999976566666666666554
No 70
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.95 E-value=2.8e-26 Score=202.54 Aligned_cols=270 Identities=21% Similarity=0.204 Sum_probs=185.6
Q ss_pred HH-HHHHHh----cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-----CChHHHHhhcCCCceEEEEeCCCCC
Q 021783 3 AL-AAVTHL----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAIGPWTKLVWVESPTNP 72 (307)
Q Consensus 3 al-~~~~~~----~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~~v~~~~~~n~ 72 (307)
|+ .++.++ +++||+|++++++|++....+...++..|++++.++. .|++++++++++++++|++++++||
T Consensus 102 a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~np 181 (420)
T 1t3i_A 102 AINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNT 181 (420)
T ss_dssp HHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTTEEEEEEESBCTT
T ss_pred HHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCCCceEEEEeCCccc
Confidence 44 455556 7899999999999999765555667778999999987 3899999999989999999999999
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 151 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~ 151 (307)
||.+.|+++|.++|++||+++|+|++|+.+..+ +...++.|++++|+||.+ |++| +|+++++++ +.+.+......
T Consensus 182 tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~-~~~g--~G~~~~~~~-~~~~~~~~~~~ 257 (420)
T 1t3i_A 182 LGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMC-APTG--IGFLYGKEE-ILEAMPPFFGG 257 (420)
T ss_dssp TCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTT-SCTT--CEEEEECHH-HHHHSCCCSCS
T ss_pred ccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCCCEEEEehhhhc-CCCc--eEEEEEchH-HHhhcCceecC
Confidence 999999999999999999999999999988765 555568999999999977 6677 899999854 43333211110
Q ss_pred --------------------cCCCCChhhHHHHhh-cccc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCC
Q 021783 152 --------------------EGSGLAPFDCWICLR-GVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE 205 (307)
Q Consensus 152 --------------------~~~~~~~~~~~~~~~-~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~ 205 (307)
.....+...+..+.. +++. +....++..++.+.+.+.|++.+++ .+..+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~~--- 333 (420)
T 1t3i_A 258 GEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQL-RLYGPN--- 333 (420)
T ss_dssp TTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTE-EEESCC---
T ss_pred CCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCe-EEeCCC---
Confidence 001122333333222 2322 2344555666777777777765433 111110
Q ss_pred CCchHHHhhhcc-CCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEE
Q 021783 206 HPGHELHYSQAK-GAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRI 284 (307)
Q Consensus 206 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRi 284 (307)
... ..+++++|.+++.+ ...+.+.+..+||.++.|..+.. | .....|. ++++|+
T Consensus 334 ---------~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gi~v~~~~~~~~---~-----------~~~~~g~-~~~iRi 388 (420)
T 1t3i_A 334 ---------PKHGDRAALASFNVAGLH-ASDVATMVDQDGIAIRSGHHCTQ---P-----------LHRLFDA-SGSARA 388 (420)
T ss_dssp ---------GGGSCBCSEEEEEETTBC-HHHHHHHHHTTTEECBCSCTTCH---H-----------HHHHTTC-CCCEEE
T ss_pred ---------ccccccCCEEEEEECCCC-HHHHHHHHHHCCeEEeeccccch---H-----------HHHhcCC-CCeEEE
Confidence 000 23678888886533 56777888888999988865321 1 0011221 567999
Q ss_pred Eecc----CChHHHHHHHHHHHhcC
Q 021783 285 SVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 285 s~~~----~~~~~~i~~l~~~l~~~ 305 (307)
|++. ++++++++.|.++++.+
T Consensus 389 s~~~~~~~~~i~~~~~~l~~~~~~~ 413 (420)
T 1t3i_A 389 SLYFYNTKEEIDLFLQSLQATIRFF 413 (420)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9985 46666777777666543
No 71
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.95 E-value=2.5e-26 Score=200.53 Aligned_cols=255 Identities=17% Similarity=0.144 Sum_probs=176.3
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC--------ChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--------d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.++.+ |++++++.+++++++|++++|+|||
T Consensus 90 a~~~~~~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~npt 165 (381)
T 1v2d_A 90 ALYVLLQSLVGPGDEVVVLEPFFDVYL----PDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPT 165 (381)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTT
T ss_pred HHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCC
Confidence 44 445557899999999999999887 5567789999988864 7899999998889999999999999
Q ss_pred ccccc---HHHHHHHHHHcCCEEEEeCccCCCCc----CCcc--CCCccEEEeccccccccCCCceeEEEEEcChhHHHH
Q 021783 74 QQICD---IRKIAEMAHAHGALLLVDNSIMSPVL----SRPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 144 (307)
Q Consensus 74 G~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~----~~~~--~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~ 144 (307)
|.+++ +++|.++|++||+++|+|++|+.... .... ..+.|++++|+||++ +++|+|+|+++++++ +.+.
T Consensus 166 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~-~~~G~r~G~~~~~~~-~~~~ 243 (381)
T 1v2d_A 166 GLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRL-EATGYRVGWIVGPKE-FMPR 243 (381)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHT-TCGGGCCEEEECCTT-THHH
T ss_pred CCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhc-CCcccceEEEEeCHH-HHHH
Confidence 99986 89999999999999999999985432 1222 357899999999999 667889999999765 4444
Q ss_pred HHHHHHhcCCCCChhhHHHHhhccc------cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 145 LYFLQNAEGSGLAPFDCWICLRGVK------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+...........+...+..+...++ .++...+...++.+.+.+.|++. ++. +.. ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~----------------~~ 305 (381)
T 1v2d_A 244 LAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLR-VYV----------------PE 305 (381)
T ss_dssp HHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCC-EEC----------------CS
T ss_pred HHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCE-ecC----------------CC
Confidence 4444433333344444444444433 23344555566666777777652 111 100 11
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHH
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLIS 296 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~ 296 (307)
.+.++++.+++.+ +.+.+.++||.++.|..+... ...++++|||++. +++++.++
T Consensus 306 ~~~~~~~~~~~~~----~~~~l~~~gi~v~~g~~~~~~-------------------~~~~~~iRi~~~~~~~~i~~~~~ 362 (381)
T 1v2d_A 306 GTYFLMAELPGWD----AFRLVEEARVALIPASAFYLE-------------------DPPKDLFRFAFCKTEEELHLALE 362 (381)
T ss_dssp BSSEEEEECTTCC----HHHHHHHTCEECEEGGGGCSS-------------------SCCTTEEEEECCSCHHHHHHHHH
T ss_pred cceEEEEecChHh----HHHHHHhCCEEEecchHhCCC-------------------CCCCCEEEEEeCCCHHHHHHHHH
Confidence 2456677775432 555566789988877653210 0135789999986 56667777
Q ss_pred HHHHHHhc
Q 021783 297 DLDKALRT 304 (307)
Q Consensus 297 ~l~~~l~~ 304 (307)
.|.+++++
T Consensus 363 ~l~~~l~~ 370 (381)
T 1v2d_A 363 RLGRVVNS 370 (381)
T ss_dssp HHHHHC--
T ss_pred HHHHHHhh
Confidence 77777654
No 72
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.95 E-value=2.1e-27 Score=207.98 Aligned_cols=260 Identities=15% Similarity=0.096 Sum_probs=176.7
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhc--CCCceEEEEeCCCCCccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAI--GPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l--~~~~~~v~~~~~~n~tG~~~ 77 (307)
.++.+++++||+|++++++|+++. +...++..|++++.++.+ |++++++++ .+++++|++++++||||.+.
T Consensus 74 ~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~ 151 (392)
T 2z9v_A 74 AAAASLISPDDVVLNLASGVYGKG--FGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTIN 151 (392)
T ss_dssp HHHHHHCCTTCCEEEEESSHHHHH--HHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEEC
T ss_pred HHHHHhcCCCCEEEEecCCcccHH--HHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceec
Confidence 445556899999999999998763 334556678999988863 789999999 46899999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH-------
Q 021783 78 DIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ------- 149 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~------- 149 (307)
|+++|.++|++||+++|+|++|+.+..+ +...++.|++++|+||++++++| .|+++++++.. +.+....
T Consensus 152 ~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g--~G~l~~~~~~~-~~l~~~~~g~~~~~ 228 (392)
T 2z9v_A 152 PIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGAPPG--LTMMGVSERAW-AKMKANPLAPRASM 228 (392)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCCCSC--CEEEEECHHHH-HHHHTCTTSCCSST
T ss_pred cHHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCcccccCCCc--eeEEEECHHHH-HHhhhccCCCCcee
Confidence 9999999999999999999999877654 44556799999999998878787 69999985533 3332110
Q ss_pred -------------HhcCCCCChhhHHHHhhcccc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHH
Q 021783 150 -------------NAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 211 (307)
Q Consensus 150 -------------~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~ 211 (307)
.....+.+.........+++. +....++..++.+.+.+.|++. ++. +.. |
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~------~---- 296 (392)
T 2z9v_A 229 LSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLS-VWA------A---- 296 (392)
T ss_dssp TCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSS------S----
T ss_pred ccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCe-ecc------C----
Confidence 001112222222222233332 2333445555666666666643 210 000 0
Q ss_pred HhhhccCCCceEEEEeCCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe-c--
Q 021783 212 HYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-G-- 287 (307)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~-- 287 (307)
+.....++++++.++.......+.+.|..+ ||.++.|..+ ..++++|+|+ +
T Consensus 297 --~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~-----------------------~~~~~lRi~~~~~~ 351 (392)
T 2z9v_A 297 --SDSIASPTTTAVRTPDGVDEKALRQAARARYGVVFSSGRGE-----------------------TLGKLTRIGHMGPT 351 (392)
T ss_dssp --SGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGG-----------------------GTTTEEEEECCGGG
T ss_pred --CccccCCceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCC-----------------------CCCCeEEEeCcccc
Confidence 000113567788875322367788888776 9988876631 0256799995 5
Q ss_pred --cCChHHHHHHHHHHHhcCC
Q 021783 288 --IEDVNDLISDLDKALRTGP 306 (307)
Q Consensus 288 --~~~~~~~i~~l~~~l~~~~ 306 (307)
.++++++++.|.++++++.
T Consensus 352 ~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 352 AQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp CSHHHHHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHHHHHcC
Confidence 2788888888888887653
No 73
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=2.2e-26 Score=201.01 Aligned_cols=260 Identities=12% Similarity=0.112 Sum_probs=175.3
Q ss_pred HH-HHHHHhc---CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-C-----ChHHHHhhcCC-CceEEEEeCCCC
Q 021783 3 AL-AAVTHLL---GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-C-----DLDEVASAIGP-WTKLVWVESPTN 71 (307)
Q Consensus 3 al-~~~~~~~---~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~-----d~~~l~~~l~~-~~~~v~~~~~~n 71 (307)
|+ .++.++. ++||+|+++++.+..... ...++..|++++.++. + |++++++++++ ++++|++++++|
T Consensus 71 al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~--~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~n 148 (385)
T 2bkw_A 71 GWDIFASNFILSKAPNKNVLVVSTGTFSDRF--ADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDT 148 (385)
T ss_dssp HHHHHHHHHSCTTCSCCEEEEECSSHHHHHH--HHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEET
T ss_pred HHHHHHHHHhccCCCCCeEEEEcCCcchHHH--HHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCC
Confidence 45 4455566 899999887554333321 1445678999999987 3 88999999975 899999999999
Q ss_pred CccccccHHHHHHHHHHc--CCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHH---
Q 021783 72 PRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL--- 145 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~--~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~--- 145 (307)
|||.+.|+++|.++|++| |+++|+|++|+.+..+ +...+++|++++|+||+++|++| .|+++++++.+.+.+
T Consensus 149 ptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~ 226 (385)
T 2bkw_A 149 STAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAG--LSISLCSSRFMDYALNDS 226 (385)
T ss_dssp TTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHH
T ss_pred CcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEEEecCccccccCCc--ceEEEEcHHHHHHHHhhc
Confidence 999999999999999999 9999999999977654 45566899999999998877888 699999866544121
Q ss_pred ---------------HH-HHHhc-C-----CCCChhhHHHHhhcccc-----HHHHHHHHHHHHHHHHHHH-hcCCCccE
Q 021783 146 ---------------YF-LQNAE-G-----SGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFL-ASHPRVKK 197 (307)
Q Consensus 146 ---------------~~-~~~~~-~-----~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l-~~~~~~~~ 197 (307)
.. ..... + .+.+.........+++. +....++..++.+.+.+.| ++. ++ .
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~-~ 304 (385)
T 2bkw_A 227 KNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL-QL-T 304 (385)
T ss_dssp HHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT-CC-E
T ss_pred cCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc-Cc-e
Confidence 11 11111 1 12333333333333332 2333455566666777777 543 22 1
Q ss_pred EecCCCCCCCchHHHhhhcc-CCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcC
Q 021783 198 VNYAGLPEHPGHELHYSQAK-GAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 276 (307)
Q Consensus 198 ~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~ 276 (307)
+..+. ... ..++++++.+++ ..++.+.|..+||.++.|..+.
T Consensus 305 ~~~~~------------~~~~~~~~~~~~~~~~---~~~~~~~l~~~gi~v~~g~~~~---------------------- 347 (385)
T 2bkw_A 305 SVSRY------------PSNMSAHGLTAVYVAD---PPDVIAFLKSHGVVIAGGIHKD---------------------- 347 (385)
T ss_dssp ESSCS------------SSTTBCSSCEEEECSC---HHHHHHHHHHTTEECBCCCCTT----------------------
T ss_pred ecccC------------cccccCCceEEEecCC---HHHHHHHHHHCCeEEeCCCCcc----------------------
Confidence 11100 001 146788888865 5567777777899988775411
Q ss_pred CCCCeEEEE-ec-------cCChHHHHHHHHHHHhcC
Q 021783 277 LTEDLVRIS-VG-------IEDVNDLISDLDKALRTG 305 (307)
Q Consensus 277 ~~~~~iRis-~~-------~~~~~~~i~~l~~~l~~~ 305 (307)
..++++||| ++ .++++++++.|+++++++
T Consensus 348 ~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~~ 384 (385)
T 2bkw_A 348 IGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQRK 384 (385)
T ss_dssp TGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC-
T ss_pred cCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHhc
Confidence 124679999 65 378889999998888765
No 74
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.95 E-value=5.5e-26 Score=196.84 Aligned_cols=243 Identities=14% Similarity=0.166 Sum_probs=176.3
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCcccccc---HHHHHHHH
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMA 86 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---~~~l~~~~ 86 (307)
|+|+++.|+|.++. ..++..|++++.++.+ +++++++.+++ ++++++++|+||||.+++ +++|+++|
T Consensus 99 d~vi~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~ 173 (361)
T 3ftb_A 99 EKILIIVPSYAEYE----INAKKHGVSVVFSYLDENMCIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHVLKLA 173 (361)
T ss_dssp SEEEEEESCCTHHH----HHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHHHHHHH
T ss_pred CcEEEecCChHHHH----HHHHHcCCeEEEeecCcccCCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHHHHHh
Confidence 99999999999887 5567789999999864 66899999988 999999999999999986 77788888
Q ss_pred HHcCCEEEEeCccCCCCc-------CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChh
Q 021783 87 HAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 159 (307)
Q Consensus 87 ~~~~~~li~D~a~~~~~~-------~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (307)
++||+++|+|++|+.... ......+.+++++|+||.+ +.+|+++|+++..++.+.+.+..... ....+..
T Consensus 174 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~g~~~~~~~~~~~~~~~~~~--~~~~~~~ 250 (361)
T 3ftb_A 174 EEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFF-AMPGIRFGYGITNNKEIAAKIKAKQN--PWNINCF 250 (361)
T ss_dssp HHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTT-SCGGGCCEEEEESCHHHHHHHHTTSC--TTCSCHH
T ss_pred hhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhc-CCCCcceeEEEeCCHHHHHHHHhhCC--CCCCCHH
Confidence 899999999999973322 1222345679999999999 66788999998555656554443222 2245556
Q ss_pred hHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHH
Q 021783 160 DCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHV 236 (307)
Q Consensus 160 ~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (307)
.+..+...++. +....+...++.+.+.+.+++.+.+..+. ...++++++.+++. +...+
T Consensus 251 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-----------------~~~~~~~~~~~~~~-~~~~l 312 (361)
T 3ftb_A 251 AEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVF-----------------SPHANFVLCRLENI-SGEKL 312 (361)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEE-----------------CCSSSEEEEEESSS-CHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceec-----------------CCCCeEEEEEcCCC-CHHHH
Confidence 66666666653 34445556667777777777665432111 11366788888753 36778
Q ss_pred HhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhc
Q 021783 237 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRT 304 (307)
Q Consensus 237 ~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~ 304 (307)
.+.|..+||.++.|..|. +..++++|+|++. ++++++++.|.+..+.
T Consensus 313 ~~~l~~~gi~v~~g~~~~---------------------~~~~~~iRis~~~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 313 YDSLLKEDIVIRRCCNFI---------------------GLDDSFVRFAIKDEKKNTKFLRALKGVENN 360 (361)
T ss_dssp HHHHHTTTEECEECTTST---------------------TCCTTEEEEECCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCeEEeeCccCC---------------------CCCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 888887899998887632 1236789999986 4567778777776654
No 75
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.95 E-value=2.2e-26 Score=202.97 Aligned_cols=266 Identities=18% Similarity=0.121 Sum_probs=174.4
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--------CChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--------~d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.++. .|++++++.+++++++|++++|+|||
T Consensus 98 al~~~~~~~~~~gd~Vl~~~~~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~npt 173 (411)
T 2o0r_A 98 AIAAAVLGLVEPGSEVLLIEPFYDSYS----PVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPT 173 (411)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTT
T ss_pred HHHHHHHHhcCCCCEEEEeCCCcHhHH----HHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCC
Confidence 44 445567899999999999999887 556778999998886 37899999999899999999999999
Q ss_pred ccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----Ccc----CCCccEEEeccccccccCCCceeEEEEEcChhH
Q 021783 74 QQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 74 G~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~~----~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
|.+++ +++|.++|++||+++|+|++|+.+... ... ..+.|++++|+||++ +++|+|+|++++++ .+
T Consensus 174 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~-~~ 251 (411)
T 2o0r_A 174 GAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMF-NCTGWKIGWACGPA-EL 251 (411)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHT-TCTTTCEEEEECCH-HH
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhc-CCccceEEEEeeCH-HH
Confidence 99986 599999999999999999999854321 111 246899999999999 57789999999974 45
Q ss_pred HHHHHHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhcc
Q 021783 142 AKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 217 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (307)
.+.+...........+...+..+...++. +....+...++.+.+.+.|++. ++ .+ .. .
T Consensus 252 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~-~~---------------~ 313 (411)
T 2o0r_A 252 IAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEI-GF-AV-HD---------------S 313 (411)
T ss_dssp HHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH-TC-EE-CC---------------C
T ss_pred HHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CC-Ee-cC---------------C
Confidence 55554444333333333333333333332 2333444455556666666543 11 11 00 1
Q ss_pred CCCceEEEEeCCH--HHHHHHHhcCC-cceeecCCCCcccee-ecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CCh
Q 021783 218 GAGSVLSFLTGSL--ALSKHVVETTK-YFSITVSFGSVKSLI-SMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDV 291 (307)
Q Consensus 218 ~~~~~~~~~~~~~--~~~~~~~~~l~-~~gi~v~~g~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~ 291 (307)
..+.++++.++.. ....++.+.+. .+||.++.|..|... ..|+ .+. ....++++|||++. +++
T Consensus 314 ~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~---------~~~--~~~~~~~iRis~~~~~e~i 382 (411)
T 2o0r_A 314 YGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQA---------SQQ--ADVWNHLVRFTFCKRDDTL 382 (411)
T ss_dssp CBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC-------------------CCGGGCEEEECCSCHHHH
T ss_pred CeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccc---------ccc--ccCCCCeEEEEecCCHHHH
Confidence 1244677777531 12566777664 579999887654210 0010 000 01125679999985 456
Q ss_pred HHHHHHHHHHHh
Q 021783 292 NDLISDLDKALR 303 (307)
Q Consensus 292 ~~~i~~l~~~l~ 303 (307)
++.++.|.++++
T Consensus 383 ~~~~~~l~~~~~ 394 (411)
T 2o0r_A 383 DEAIRRLSVLAE 394 (411)
T ss_dssp HHHHHHHGGGGC
T ss_pred HHHHHHHHHHHh
Confidence 666666665554
No 76
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.95 E-value=9.4e-26 Score=197.38 Aligned_cols=228 Identities=18% Similarity=0.170 Sum_probs=178.3
Q ss_pred HH-HHHHHhcCCCCeEEEcC-CCCcchHHHHh------hhcccCCcEEEEecC-----CChHHHHhhcCCCceEEEEeC-
Q 021783 3 AL-AAVTHLLGTGEEIVAGD-DLYGGTDRLLS------RVTPKTGVVVKRVNT-----CDLDEVASAIGPWTKLVWVES- 68 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~-~~~~~~~~~~~------~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~~v~~~~- 68 (307)
|+ .++.++++|||+|++++ +.|..+...+. ..++..|++++.+|. .|+++++++++++|++|++++
T Consensus 89 Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~tklV~i~~s 168 (409)
T 3jzl_A 89 AISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRS 168 (409)
T ss_dssp HHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTTEEEEEEECS
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccCCCeEEEEECC
Confidence 45 56667899999999998 99988875542 456778999999998 599999999999999999999
Q ss_pred ---CCCCccccccHHHHHHHHHH--cCCEEEEeCccCCCCc-CCccCCCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 69 ---PTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 69 ---~~n~tG~~~~~~~l~~~~~~--~~~~li~D~a~~~~~~-~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
|+||+|.+.|+++|.++|++ +|+++++|++|+.+.. ..+...|+|++++|+||+++|+...++|+++++++ +.
T Consensus 169 ~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~-li 247 (409)
T 3jzl_A 169 RGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEA-LV 247 (409)
T ss_dssp CTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEECHH-HH
T ss_pred CCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccccCCccccCCeEEEECccccCCccCCceEEEEEeCHH-HH
Confidence 99999999999999999999 9999999999998874 46777899999999999997654455899999854 54
Q ss_pred HHHHHHHHh--cC--CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 143 KELYFLQNA--EG--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 143 ~~~~~~~~~--~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+.+...... .+ ........+.+..+++....++++..+++..+.+.|+.++. .+ ++. .+.|.
T Consensus 248 ~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~~~~r~~~~~~~a~~la~~L~~~g~--~v-~p~-~~~~~---------- 313 (409)
T 3jzl_A 248 DLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAAMLAEFGV--EA-DPV-WDAPR---------- 313 (409)
T ss_dssp HHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCC----------
T ss_pred HHHHHHhccccccccccccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCC--cc-cCC-CCCCC----------
Confidence 444443221 11 12222235667788888889999999999999999998863 33 444 22222
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCccee
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYFSI 245 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~gi 245 (307)
...++.|.+++.+.+..+.+.|+....
T Consensus 314 ~~~i~~i~l~~~~~~~~~~~~L~~~~~ 340 (409)
T 3jzl_A 314 TDLIQSVSFHNKEKMVAFAQAIQAASP 340 (409)
T ss_dssp SSSCCEEECSCHHHHHHHHHHHHHTSS
T ss_pred ccEEEEEEeCCHHHHHHHHHHHHhcCc
Confidence 234788889888888999999887654
No 77
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.95 E-value=5.3e-26 Score=200.75 Aligned_cols=256 Identities=14% Similarity=0.095 Sum_probs=175.0
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-------CChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.++. .|++++++.++++++++++++|+||||
T Consensus 116 al~~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG 191 (416)
T 1bw0_A 116 GILMAITAICDAGDYALVPQPGFPHYE----TVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCG 191 (416)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTHHH----HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred HHHHHHHHhCCCCCEEEEcCCCcHhHH----HHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCC
Confidence 45 455567899999999999998877 556778999988875 278999999998899999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCccCCCCc---------CCcc---CCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 75 QICD---IRKIAEMAHAHGALLLVDNSIMSPVL---------SRPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 75 ~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~---------~~~~---~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
.+++ +++|.++|++||+++|+|++|+.... .... ..+.+++++|+||++ +.+|+|+|+++++++
T Consensus 192 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Glr~G~~~~~~~ 270 (416)
T 1bw0_A 192 SNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNL-VVPGWRLGWLLYVDP 270 (416)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTT-SCGGGCCEEEEEECT
T ss_pred cccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhC-CCCCceEEEEEeeCc
Confidence 9998 99999999999999999999975221 1111 223468999999998 457899999999875
Q ss_pred -hHHH----HHHHHHHhcCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCch
Q 021783 140 -RLAK----ELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH 209 (307)
Q Consensus 140 -~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~ 209 (307)
.+.+ ....... .....+...+..+...++ .+....++..++.+.+.+.|++.+++. +..
T Consensus 271 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~--------- 339 (416)
T 1bw0_A 271 HGNGPSFLEGLKRVGM-LVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLA-PTM--------- 339 (416)
T ss_dssp TCSCHHHHHHHHHHHH-HHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEE-ECC---------
T ss_pred hhhHHHHHHHHHHHhc-cccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccC---------
Confidence 2222 1112111 122344444444444443 233445555666667777776543221 100
Q ss_pred HHHhhhccCCCceEEEEeCCH-----HHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEE
Q 021783 210 ELHYSQAKGAGSVLSFLTGSL-----ALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVR 283 (307)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iR 283 (307)
...+.++++.++.. .....+.+.+ ..+||.+++|..|. .++++|
T Consensus 340 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~-----------------------~~~~iR 389 (416)
T 1bw0_A 340 -------PRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFH-----------------------APGFTR 389 (416)
T ss_dssp -------CCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGT-----------------------CTTEEE
T ss_pred -------CCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccC-----------------------CCCeEE
Confidence 11355667776521 2356677776 57899988876532 145799
Q ss_pred EEecc--CChHHHHHHHHHHHhc
Q 021783 284 ISVGI--EDVNDLISDLDKALRT 304 (307)
Q Consensus 284 is~~~--~~~~~~i~~l~~~l~~ 304 (307)
||++. +++++.++.|.+++++
T Consensus 390 is~~~~~e~l~~~l~~l~~~l~~ 412 (416)
T 1bw0_A 390 LTTTRPVEVYREAVERIKAFCQR 412 (416)
T ss_dssp EECCSCHHHHHHHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHHHHHH
Confidence 99975 5677777777777754
No 78
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.94 E-value=1.6e-25 Score=198.41 Aligned_cols=258 Identities=14% Similarity=0.125 Sum_probs=177.2
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcC------CCceEEEEeC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG------PWTKLVWVES 68 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~------~~~~~v~~~~ 68 (307)
|+ .++.+++++||+|+++.|+|.++.. .++...|++++.++.+ |+++++++++ +++++|++++
T Consensus 120 ai~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~ 196 (428)
T 1iay_A 120 ANETIIFCLADPGDAFLVPSPYYPAFNR---DLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTN 196 (428)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCTTHHH---HTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEES
T ss_pred HHHHHHHHhCCCCCeEEEccCCCcchHH---HHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcC
Confidence 44 4555678999999999999988762 2345789999999863 7889988875 3789999999
Q ss_pred CCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----CccC---------CCcc--EEEeccccccccCCCc
Q 021783 69 PTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLE---------LGAD--IVMHSATKFIAGHSDV 129 (307)
Q Consensus 69 ~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~~~---------~~~d--~~~~s~~K~~~g~~g~ 129 (307)
|+||||.+++ +++|.++|++||+++|+|++|+...+. .... ++.| +++.|+||++ |.+|+
T Consensus 197 p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~-g~~Gl 275 (428)
T 1iay_A 197 PSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM-GLPGF 275 (428)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTS-SCGGG
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhc-CCCCc
Confidence 9999999998 999999999999999999999753221 1111 1145 9999999999 66799
Q ss_pred eeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccH-------HHHHHHHHHHHHHHHHHHhcCCCccEEecCC
Q 021783 130 MAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM-------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAG 202 (307)
Q Consensus 130 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 202 (307)
|+|+++++++.+.+.+...... ...+...+..+...++.. +...+.+.++.+.+.+.|++. ++ .+
T Consensus 276 r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~---- 347 (428)
T 1iay_A 276 RVGIIYSFNDDVVNCARKMSSF--GLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GI-KC---- 347 (428)
T ss_dssp CEEEEEESCHHHHHHHHHHHTT--SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC-CB----
T ss_pred eEEEEEeCCHHHHHHHHHHHhc--ccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC-cc----
Confidence 9999999656565555543322 234445555555555432 223444455566666666654 11 00
Q ss_pred CCCCCchHHHhhhccCCCceEEEEeCCH------HHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhc
Q 021783 203 LPEHPGHELHYSQAKGAGSVLSFLTGSL------ALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQAR 275 (307)
Q Consensus 203 l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~ 275 (307)
. . ...+.++++.++.. +....+.+.|..+ ||.++.|..+..
T Consensus 348 ---~--------~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~-------------------- 395 (428)
T 1iay_A 348 ---L--------K-NNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFEC-------------------- 395 (428)
T ss_dssp ---C--------C-CSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTC--------------------
T ss_pred ---c--------C-CCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCC--------------------
Confidence 0 0 11355677777532 2356788888665 999887765321
Q ss_pred CCCCCeEEEEecc---CChHHHHHHHHHHHhcC
Q 021783 276 GLTEDLVRISVGI---EDVNDLISDLDKALRTG 305 (307)
Q Consensus 276 ~~~~~~iRis~~~---~~~~~~i~~l~~~l~~~ 305 (307)
..++++||+++. +++++.++.|.+++++.
T Consensus 396 -~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 427 (428)
T 1iay_A 396 -QEPGWFRVCFANMDDGTVDIALARIRRFVGVE 427 (428)
T ss_dssp -SSSSEEEEECSSSCHHHHHHHHHHHHHHHHTT
T ss_pred -CCCCEEEEEEecCCHHHHHHHHHHHHHHHhcc
Confidence 125679999982 67888888888887653
No 79
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=1.2e-26 Score=205.51 Aligned_cols=262 Identities=14% Similarity=0.117 Sum_probs=177.9
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcCC--------CceEEE-EeC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGP--------WTKLVW-VES 68 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~~--------~~~~v~-~~~ 68 (307)
|+ .++.+++++||+|+++.|+|+++. ..++..|++++.+|.+ |++++++.+++ ++++|+ +++
T Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~ 196 (425)
T 1vp4_A 121 ALDLIGKLFLDDESYCVLDDPAYLGAI----NAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSN 196 (425)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECS
T ss_pred HHHHHHHHhCCCCCEEEEeCCCcHHHH----HHHHHcCCEEEEeccCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCC
Confidence 45 455567899999999999998887 5566789999998873 88999988865 788884 789
Q ss_pred CCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----Cc---cCCCccEEEeccccccccCCCceeEEEEEc
Q 021783 69 PTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RP---LELGADIVMHSATKFIAGHSDVMAGVLAVK 137 (307)
Q Consensus 69 ~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~---~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~ 137 (307)
|+||||.+++ +++|.++|++||+++|+|++|+..... .. ...+.+++++|+||++ + +|+|+|+++++
T Consensus 197 ~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~-~G~r~G~~~~~ 274 (425)
T 1vp4_A 197 FHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVL-A-PGLRIGMVAGS 274 (425)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTT-C-GGGCEEEEECC
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEecccccc-c-cccceEEEeeC
Confidence 9999999986 678999999999999999999864321 11 1235789999999999 5 79999999998
Q ss_pred ChhHHHHHHHHHHhcCCCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcC-CCccEEecCCCCCCCchH
Q 021783 138 GERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHE 210 (307)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~l~~~~~~~ 210 (307)
++ +.+.+...........+...++.+...++. ++...+.+.++.+.+.+.|++. +.. +++.
T Consensus 275 ~~-~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-----------~g~~ 342 (425)
T 1vp4_A 275 KE-FIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDI-----------PGVK 342 (425)
T ss_dssp HH-HHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTS-----------TTCE
T ss_pred HH-HHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-----------CceE
Confidence 44 555554443333233355555555444432 2233444455666677766643 210 0111
Q ss_pred HHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--
Q 021783 211 LHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-- 288 (307)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-- 288 (307)
.. . ...+.++++.++...+...+.+.|..+||.+++|..|.. .+..++++|||++.
T Consensus 343 ~~--~-~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~-------------------~~~~~~~iRis~~~~~ 400 (425)
T 1vp4_A 343 WV--K-SEGGLFIWLTLPEGFDTWEMFEYAKRKKVFYVPGRVFKV-------------------YDEPSPSMRLSFCLPP 400 (425)
T ss_dssp EC--C-CSBSSEEEEECCTTCCTTTTHHHHHHHTEECEEGGGGCT-------------------TCCCCSEEEEECSSSC
T ss_pred Ee--c-CCccEEEEEEcCCCCCHHHHHHHHHHCCCEEECchhhcC-------------------CCCCCCeEEEEeCCCC
Confidence 00 0 123567788875322245666777777998888765321 01135789999986
Q ss_pred -CChHHHHHHHHHHHhc
Q 021783 289 -EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 -~~~~~~i~~l~~~l~~ 304 (307)
+++++.++.|.+++++
T Consensus 401 ~e~i~~~l~~l~~~l~~ 417 (425)
T 1vp4_A 401 DEKIVEGIKRLREVVLE 417 (425)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 5777888888877753
No 80
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.94 E-value=2.4e-26 Score=200.20 Aligned_cols=252 Identities=12% Similarity=0.029 Sum_probs=176.9
Q ss_pred HH-HHHHHhcCC--CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChH----HHHhhcCCCceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHLLGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLD----EVASAIGPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~--gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~----~l~~~l~~~~~~v~~~~~~n~tG~ 75 (307)
|+ .++..++++ ||+|+++.|+|.++. ..++..|++++.++.++.+ ++++.+.++++++++++|+||||.
T Consensus 94 al~~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~ 169 (376)
T 3ezs_A 94 VLFNFPSFVLFDYQNPTIAYPNPFYQIYE----GAAKFIKAKSLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGR 169 (376)
T ss_dssp HHHHHHHHHTTTCSSCEEEEEESCCTHHH----HHHHHTTCEEEEEECCGGGTSCCCCCHHHHHHCSEEEECSSCTTTCC
T ss_pred HHHHHHHHHcCCCCCCEEEEecCCcHhHH----HHHHHcCCEEEEcccCCCCCcchhHHhhhccCCCEEEEcCCCCCcCC
Confidence 45 455567899 999999999998877 5677889999999975322 555666667899999999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCccCCCCcC----Ccc---------CCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 76 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPL---------ELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 76 ~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~----~~~---------~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
+++ +++|+++|++||+++|+|++|+..... ... ..+.+++++|+||++ |.+|+|+|+++.+ +
T Consensus 170 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~ 247 (376)
T 3ezs_A 170 TLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRS-SAPGLRSGFIAGD-S 247 (376)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTT-TCGGGCCEEEEEC-H
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhcc-CCccceeEEEeeC-H
Confidence 987 777888899999999999999853321 111 457899999999999 6678999999986 4
Q ss_pred hHHHHHHHHHHhcCCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhc
Q 021783 140 RLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 216 (307)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 216 (307)
.+.+.+...........+...+..+...++. +....+.+.++.+.+.+.++ ++. .
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~-----------~~~-~---------- 305 (376)
T 3ezs_A 248 RLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK-----------NTL-I---------- 305 (376)
T ss_dssp HHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST-----------TCC-C----------
T ss_pred HHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc-----------CCC-C----------
Confidence 4555565555544555566555555555432 23333344444444444443 111 1
Q ss_pred cCCCceEEEEeCCHHHHHHHHhcCCc-ceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHH
Q 021783 217 KGAGSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVND 293 (307)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~ 293 (307)
...+.++++.++ ....+.+.|.. +||.+++|..|.. .+..++++|||++. +++++
T Consensus 306 ~~~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~~~~~iRis~~~~~~~i~~ 363 (376)
T 3ezs_A 306 YPYSFYVYLPVQ---NGENFAKTLYQNEGIITLPALYLGR-------------------NRIGADYVRLALVYDTPLLEK 363 (376)
T ss_dssp CSBSSEEEEECS---CHHHHHHHHHHHHCCBCEEGGGGCS-------------------TTTTTTEEEEECCSCHHHHHH
T ss_pred CCcceEEEEECC---CHHHHHHHHHHhCCEEEeCcHHhCC-------------------CCCCCCeEEEEEcCCHHHHHH
Confidence 224667777776 35677777766 7999988876431 01246789999965 67778
Q ss_pred HHHHHHHHHhc
Q 021783 294 LISDLDKALRT 304 (307)
Q Consensus 294 ~i~~l~~~l~~ 304 (307)
.++.|.+++++
T Consensus 364 ~l~~l~~~l~~ 374 (376)
T 3ezs_A 364 PLEIIETYREN 374 (376)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHHh
Confidence 88888887765
No 81
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.94 E-value=1.1e-26 Score=203.44 Aligned_cols=261 Identities=16% Similarity=0.192 Sum_probs=181.8
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC-CceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP-WTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~-~~~~v~~~~~~n~tG~ 75 (307)
|+ .++.+++++||+|+++.++|.+.. +...++..|++++.++.+ |++++++.+++ ++++|++++++||||.
T Consensus 86 al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~ 163 (393)
T 3kgw_A 86 AMETALFNLLEPGDSFLTGTNGIWGMR--AAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGV 163 (393)
T ss_dssp HHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTE
T ss_pred HHHHHHHhcCCCCCEEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchh
Confidence 45 556667899999999988875432 225667889999999863 89999999986 8999999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH-----
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ----- 149 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~----- 149 (307)
+.|+++|.++|++||+++|+|++|+.+... ....++.|++++|+||+++|+.| +|+++++++.. +.+....
T Consensus 164 ~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g--~g~~~~~~~~~-~~~~~~~~~~~~ 240 (393)
T 3kgw_A 164 VQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPG--ISLISFNDKAK-YKVYSRKTKPVS 240 (393)
T ss_dssp ECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTCCCSS--CEEEEECHHHH-HHHHTCSSCCSC
T ss_pred hccHHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccccCCCc--eeEEEECHHHH-HHHhccCCCCCc
Confidence 999999999999999999999999977654 55667899999999998877777 89999986543 3332110
Q ss_pred ----------Hh--------cCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCC
Q 021783 150 ----------NA--------EGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 206 (307)
Q Consensus 150 ----------~~--------~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~ 206 (307)
.. ...+.+.........+++ .+....++..++.+.+.+.|++. ++. +..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----- 313 (393)
T 3kgw_A 241 FYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLK-FFVK----- 313 (393)
T ss_dssp STTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSS-----
T ss_pred eeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCe-eccC-----
Confidence 00 011223333333333332 23444566666777777777654 110 0000
Q ss_pred CchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEE
Q 021783 207 PGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 285 (307)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis 285 (307)
......+.++++.++......++.+.|..+ ||.++.|..+. .++++|++
T Consensus 314 -------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----------------------~~~~iRi~ 363 (393)
T 3kgw_A 314 -------DPEIRLPTITTVTVPAGYNWRDIVSYVLDHFSIEISGGLGPT-----------------------EERVLRIG 363 (393)
T ss_dssp -------SGGGBCSSEEEEECCTTBCHHHHHHHHHHHHCEECBCCCGGG-----------------------TTTEEEEE
T ss_pred -------ChhhcCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEeCCcccC-----------------------CCCEEEEE
Confidence 000112456677775433467788888776 99998876311 25679999
Q ss_pred e-c----cCChHHHHHHHHHHHhcC
Q 021783 286 V-G----IEDVNDLISDLDKALRTG 305 (307)
Q Consensus 286 ~-~----~~~~~~~i~~l~~~l~~~ 305 (307)
+ + .++++++++.|.++++++
T Consensus 364 ~~~~~~~~~~i~~~~~~l~~~l~~~ 388 (393)
T 3kgw_A 364 LLGYNATTENVDRVAEALREALQHC 388 (393)
T ss_dssp CCGGGCCHHHHHHHHHHHHHHHHHS
T ss_pred ecccCCCHHHHHHHHHHHHHHHHhh
Confidence 8 5 378888899998888754
No 82
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.94 E-value=1.7e-26 Score=200.78 Aligned_cols=247 Identities=13% Similarity=0.141 Sum_probs=175.8
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC-CceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP-WTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~-~~~~v~~~~~~n~tG~ 75 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.+|.+ |++++++.+++ ++++|++++|+||||.
T Consensus 104 al~~~~~~l~~~gd~Vl~~~~~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~ 179 (369)
T 3cq5_A 104 ILQQLLQAFGGPGRTALGFQPSYSMHP----ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGD 179 (369)
T ss_dssp HHHHHHHHHCSTTCEEEEEESSCTHHH----HHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCC
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCC
Confidence 45 455567899999999999998887 5567789999999863 78999999876 8899999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccCCCCcC-C----ccCCC-ccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIMSPVLS-R----PLELG-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~----~~~~~-~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
+.|.+++.++++.+++++|+|++|+.+... . ...++ .+++++|+||++ |.+|+|+|+++++++ +.+.+....
T Consensus 180 ~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~-~~~~l~~~~ 257 (369)
T 3cq5_A 180 VTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAF-DFAGGRLGYFVANPA-FIDAVMLVR 257 (369)
T ss_dssp CCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTT-SCGGGCCEEEEECTH-HHHHHHTTS
T ss_pred CCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhc-CCcccceEEEEeCHH-HHHHHHHcC
Confidence 999999999999999999999999855421 1 12345 789999999999 556889999999865 433333222
Q ss_pred HhcCCCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 150 NAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
. ....+...++.+...++. +....+...++.+.+.+.+++. ++ .+. +..++++++.
T Consensus 258 ~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~-----------------~~~~~~~~~~ 316 (369)
T 3cq5_A 258 L--PYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL-GY-AVV-----------------PSESNFVFFG 316 (369)
T ss_dssp C--TTCSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH-TC-EEE-----------------CCSSSEEEEE
T ss_pred C--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC-CC-EEC-----------------CCCCeEEEEE
Confidence 1 123445555555555543 3334455556666666666642 11 111 1135677887
Q ss_pred eCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhc
Q 021783 227 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRT 304 (307)
Q Consensus 227 ~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~ 304 (307)
++ .+...+.+.|..+||.++.|. .++++|+|++. ++++++++.|.++++.
T Consensus 317 ~~--~~~~~l~~~l~~~gi~v~~~~--------------------------~~~~iRis~~~~~~i~~~~~~l~~~~~~ 367 (369)
T 3cq5_A 317 DF--SDQHAAWQAFLDRGVLIRDVG--------------------------IAGHLRTTIGVPEENDAFLDAAAEIIKL 367 (369)
T ss_dssp CC--SSHHHHHHHHHHTTEECBCCS--------------------------CTTEEEEECCCHHHHHHHHHHHHHHHTT
T ss_pred CC--CCHHHHHHHHHHCCEEEEECC--------------------------CCCeEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 75 235667777778899887762 14569999985 5667777777776643
No 83
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.94 E-value=4.9e-26 Score=199.00 Aligned_cols=256 Identities=15% Similarity=0.142 Sum_probs=173.1
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC------CChHHHHhhcCCCceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------CDLDEVASAIGPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~------~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 75 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.++. .|++++++.+++++++|++++|+||||.
T Consensus 103 a~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 178 (386)
T 1u08_A 103 ALYAAITALVRNGDEVICFDPSYDSYA----PAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSAT 178 (386)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCC
T ss_pred HHHHHHHHhCCCCCEEEEeCCCchhHH----HHHHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCCCc
Confidence 44 445557899999999999999887 556778999999986 3789999999989999999999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----CCcc----CCCccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 76 ICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----SRPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 76 ~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~~----~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
+++ +++|.++|++||+++|+|++|+.... .... ..+.|++++|+||++ +++|+|+|+++++++ +.+
T Consensus 179 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~-~~~ 256 (386)
T 1u08_A 179 VWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTY-HMTGWKVGYCVAPAP-ISA 256 (386)
T ss_dssp CCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHT-TCGGGCCEEEECCHH-HHH
T ss_pred cCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhc-CCcccceEEEEcCHH-HHH
Confidence 985 78999999999999999999975321 1111 247899999999999 567899999999754 555
Q ss_pred HHHHHHHhcCCCCChhhHHHHhhcccc----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 144 ELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
.+...........+...+..+...++. +....+...++.+.+.+.|++. ++ .+ . . ...
T Consensus 257 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~-------------~--~-~~~ 318 (386)
T 1u08_A 257 EIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNES-RL-EI-------------L--P-CEG 318 (386)
T ss_dssp HHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSS-SC-EE-------------C--C-CCB
T ss_pred HHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CC-ee-------------c--C-CCc
Confidence 555444333333344444444444432 2233344455555566555543 11 11 0 0 112
Q ss_pred CceEEEEeCCH--HHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHH
Q 021783 220 GSVLSFLTGSL--ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLIS 296 (307)
Q Consensus 220 ~~~~~~~~~~~--~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~ 296 (307)
+.++++.+++. .+...+.+.+. .+||.++.|..|... ...++++|+|++. .++.++
T Consensus 319 g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~-------------------~~~~~~iRis~~~--~~~~i~ 377 (386)
T 1u08_A 319 TYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCAD-------------------PFPHKLIRLCFAK--KESTLL 377 (386)
T ss_dssp SSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSS-------------------CCCSCEEEEECCS--CHHHHH
T ss_pred eEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCC-------------------CCCCCEEEEEEcC--CHHHHH
Confidence 55778887643 23567777664 579998877653210 0135789999985 344455
Q ss_pred HHHHHHh
Q 021783 297 DLDKALR 303 (307)
Q Consensus 297 ~l~~~l~ 303 (307)
.+.+.|+
T Consensus 378 ~~~~~l~ 384 (386)
T 1u08_A 378 AAAERLR 384 (386)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 5555444
No 84
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.94 E-value=4.3e-26 Score=200.74 Aligned_cols=259 Identities=16% Similarity=0.175 Sum_probs=178.7
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcC----C--CceEEE-EeCCC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIG----P--WTKLVW-VESPT 70 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~----~--~~~~v~-~~~~~ 70 (307)
|+ .++.+++++||+|+++.|+|+++. ..++..|++++.+|.+ |++++++.++ + ++++|+ +++++
T Consensus 110 a~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~ 185 (407)
T 2zc0_A 110 ALDLLGRVLIDPGDVVITENPSYINTL----LAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQ 185 (407)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSC
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHHH----HHHHHcCCEEEEcccCCCCCCHHHHHHHHHhhhcccCCceEEEECCCCC
Confidence 44 455567889999999999998877 5567789999998873 8899999887 5 788874 67999
Q ss_pred CCccccccHH---HHHHHHHHcCCEEEEeCccCCCCcC-----Ccc---CCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 71 NPRQQICDIR---KIAEMAHAHGALLLVDNSIMSPVLS-----RPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 71 n~tG~~~~~~---~l~~~~~~~~~~li~D~a~~~~~~~-----~~~---~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
||||.+.|.+ +|.++|++||+++|+|++|+.+... ... ..+.+++++|+||++ + +|+++|+++++ +
T Consensus 186 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~-~G~r~G~~~~~-~ 262 (407)
T 2zc0_A 186 NPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVL-G-TGFRIGWIIAE-G 262 (407)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTT-C-TTSCCEEEECC-H
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEccccccc-C-CCcceEEEecC-H
Confidence 9999999865 9999999999999999999864321 121 225679999999999 5 68899999997 4
Q ss_pred hHHHHHHHHHHhcCCCCChhhHHHHhhcccc-------HHHHHHHHHHHHHHHHHHHhcC-CCccEEecCCCCCCCchHH
Q 021783 140 RLAKELYFLQNAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHEL 211 (307)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~l~~~~~~~~ 211 (307)
.+.+.+...........+...+..+...++. +....+...++.+.+.+.|++. +.+ . +
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--------~------~ 328 (407)
T 2zc0_A 263 EILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNA--------E------F 328 (407)
T ss_dssp HHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTS--------C------B
T ss_pred HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCC--------E------E
Confidence 4555555444433333344444444444332 1222344455556666666542 211 0 0
Q ss_pred HhhhccCCCceEEEEeCCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--
Q 021783 212 HYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-- 288 (307)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-- 288 (307)
. . ...+.++++.++...+..++.+.|..+ ||.++.|..|.. .+..++++|||++.
T Consensus 329 ~--~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~-------------------~~~~~~~iRis~~~~~ 386 (407)
T 2zc0_A 329 T--K-PIAGMFVMFFLPEGADGISFANELMEREGVVVVPGKPFYT-------------------DESGKNAIRLNFSRPS 386 (407)
T ss_dssp C--C-CSBSSEEEEECSTTCCHHHHHHHHHHHTCEECBCSGGGCS-------------------SSCCTTEEEEECSSSC
T ss_pred e--c-CCCcEEEEEEcCCCCCHHHHHHHHHHhCCeEEECchhccC-------------------CCCCCCeEEEEeCCCC
Confidence 0 0 113557788885332367788888777 999998875321 01135789999985
Q ss_pred -CChHHHHHHHHHHHhc
Q 021783 289 -EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 -~~~~~~i~~l~~~l~~ 304 (307)
+++++.++.|.+++++
T Consensus 387 ~~~i~~~~~~l~~~l~~ 403 (407)
T 2zc0_A 387 KEEIPIGIKKLAKLYKE 403 (407)
T ss_dssp TTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 6788888888888764
No 85
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.94 E-value=1.5e-25 Score=196.70 Aligned_cols=228 Identities=18% Similarity=0.143 Sum_probs=178.8
Q ss_pred HH-HHHHHhcCCCCeEEEcC-CCCcchHHHHh-------hhcccCCcEEEEecC----CChHHHHhhcC--CCceEEEEe
Q 021783 3 AL-AAVTHLLGTGEEIVAGD-DLYGGTDRLLS-------RVTPKTGVVVKRVNT----CDLDEVASAIG--PWTKLVWVE 67 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~-~~~~~~~~~~~-------~~~~~~g~~~~~v~~----~d~~~l~~~l~--~~~~~v~~~ 67 (307)
|+ .++.++++|||+|++++ +.|.++...+. ..++..|++++.+|. .|+++++++++ ++|++|+++
T Consensus 104 A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~ 183 (427)
T 3hvy_A 104 AIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQ 183 (427)
T ss_dssp HHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEE
Confidence 45 56667899999999999 99988765441 456678999999998 69999999998 899999999
Q ss_pred C----CCCCccccccHHHHHHHHHH--cCCEEEEeCccCCCC-cCCccCCCccEEEeccccccccCCCceeEEEEEcChh
Q 021783 68 S----PTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER 140 (307)
Q Consensus 68 ~----~~n~tG~~~~~~~l~~~~~~--~~~~li~D~a~~~~~-~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~ 140 (307)
+ |+||+|.+.|+++|.++|++ +|+++++|++|+.+. ...+...|+|++++|+||+++|....++|+++++++
T Consensus 184 ~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~- 262 (427)
T 3hvy_A 184 RSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAGKEE- 262 (427)
T ss_dssp SSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHH-
T ss_pred CCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCCCCcccCCeEEEECCcccccccccceEEEEEECHH-
Confidence 9 99999999999999999999 899999999999887 457777899999999999997643345899999854
Q ss_pred HHHHHHHHH--HhcCC--CCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhc
Q 021783 141 LAKELYFLQ--NAEGS--GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 216 (307)
Q Consensus 141 ~~~~~~~~~--~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 216 (307)
+.+.+.... ...+. ..+...++++..+++....+.++..+++..+.+.|+.++. .+ +++ .+.|.
T Consensus 263 li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~~~r~~~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~-------- 330 (427)
T 3hvy_A 263 YVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFMAPHVTIEAVKGAVFCARIMELAGF--DV-LPK-YNDKR-------- 330 (427)
T ss_dssp HHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCC--------
T ss_pred HHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHhCCC--ee-cCC-CCCCC--------
Confidence 545454432 22221 1222347888888888889999999999999999998863 33 444 22222
Q ss_pred cCCCceEEEEeCCHHHHHHHHhcCCccee
Q 021783 217 KGAGSVLSFLTGSLALSKHVVETTKYFSI 245 (307)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi 245 (307)
...++.|.+++.+.+..+.+.++....
T Consensus 331 --~~li~~~~l~~~~~~~~f~~~l~~~~~ 357 (427)
T 3hvy_A 331 --TDIIQAIKFNDEKKLIDFIKGIQTASP 357 (427)
T ss_dssp --SSSEEEEECSSHHHHHHHHHHHHHTCS
T ss_pred --ceEEEEEeCCCHHHHHHHHHHhccccc
Confidence 234888999888888899988877543
No 86
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.94 E-value=2.1e-26 Score=203.73 Aligned_cols=258 Identities=16% Similarity=0.174 Sum_probs=178.8
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC--------ChHHHHhhcC-CCceEEEEeCCCCC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAIG-PWTKLVWVESPTNP 72 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--------d~~~l~~~l~-~~~~~v~~~~~~n~ 72 (307)
|+ .++..++++||+|+++.|+|.++. ..++..|.+++.+|.+ |+++++++++ +++++|++++|+||
T Consensus 131 a~~~a~~~~~~~gd~Vi~~~~~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~np 206 (421)
T 3l8a_A 131 AISIALQAFSEKGDAVLINSPVYYPFA----RTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNP 206 (421)
T ss_dssp HHHHHHHHHSCTEEEEEEEESCCHHHH----HHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTT
T ss_pred HHHHHHHHhcCCCCEEEECCCCcHHHH----HHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCC
Confidence 44 455667899999999999998887 5566789999998863 8999999998 79999999999999
Q ss_pred ccccc---cHHHHHHHHHHcCCEEEEeCccCCCCc-----CC-----ccCCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 73 RQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVL-----SR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 73 tG~~~---~~~~l~~~~~~~~~~li~D~a~~~~~~-----~~-----~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
+|.++ ++++|.++|++||+++|+|++|+.... .. ....+.++++.|+||++ +.+|+++|+++++++
T Consensus 207 tG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~~~G~~~~~~~ 285 (421)
T 3l8a_A 207 GGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTF-NIAGTKNSFAIIQNE 285 (421)
T ss_dssp TTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHH-TCGGGCCEEEECCSH
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhc-cCchhheEeEEcCCH
Confidence 99984 699999999999999999999974221 11 12236779999999999 667888999999866
Q ss_pred hHHHHHHHHHHhc-CCCCChhhHHHHhhccc----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhh
Q 021783 140 RLAKELYFLQNAE-GSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 140 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 214 (307)
.+.+.+....... ....++..+..+...++ .++...+...++.+.+.+.+++.+.+.. ..+
T Consensus 286 ~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~-~~~------------- 351 (421)
T 3l8a_A 286 SLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKV-MEP------------- 351 (421)
T ss_dssp HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEE-ECC-------------
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceE-eCC-------------
Confidence 6766665554332 33455555554444443 2344455556666677777765433311 111
Q ss_pred hccCCCceEEEEeCCH-HHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CC
Q 021783 215 QAKGAGSVLSFLTGSL-ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--ED 290 (307)
Q Consensus 215 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~ 290 (307)
..+.+.++.+... ....++.+.|. ..||.++.|..|.. ..++++||+++. ++
T Consensus 352 ---~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~---------------------~~~~~iRi~~~~~~~~ 407 (421)
T 3l8a_A 352 ---EGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGK---------------------EGKYFARLNVATPKNT 407 (421)
T ss_dssp ---SBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCG---------------------GGTTEEEEECCSCHHH
T ss_pred ---CeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCC---------------------CCCCEEEEEecCCHHH
Confidence 1133444666431 12556777774 56999988776321 136789999985 56
Q ss_pred hHHHHHHHHHHHh
Q 021783 291 VNDLISDLDKALR 303 (307)
Q Consensus 291 ~~~~i~~l~~~l~ 303 (307)
+++.++.|.++++
T Consensus 408 i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 408 VQEALSRIISVFG 420 (421)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHh
Confidence 7777777777654
No 87
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.94 E-value=1.5e-26 Score=200.53 Aligned_cols=250 Identities=16% Similarity=0.167 Sum_probs=174.0
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC-CCceEEEEeCCCCCccccccHH
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
|+ .++.+++++||+|+++.|+|.++. ..++..|++++.++.++...+++... .+++++++++|+||||.++|.+
T Consensus 94 al~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~v~i~~p~nptG~~~~~~ 169 (360)
T 3hdo_A 94 VLNNLIRAFAAEGEEIGYVHPSYSYYG----TLAEVQGARVRTFGLTGDFRIAGFPERYEGKVFFLTTPNAPLGPSFPLE 169 (360)
T ss_dssp HHHHHHHHHCCTTCEEEEESSSCTHHH----HHHHHHTCEEEEECBCTTSSBTTCCSSBCSSEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHHHhCCCCEEEEcCCChHHHH----HHHHHCCCEEEEeeCCCCCCHHHHHhhcCCCEEEEeCCCCCCCCCcCHH
Confidence 45 455567899999999999999887 55677899999999853222222222 2467999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCccCCC----CcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCC
Q 021783 81 KIAEMAHAHGALLLVDNSIMSP----VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 156 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~----~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 156 (307)
++.++|+++|+++|+|++|+.. ........+.+++++|+||++ |.+|+++|+++++ +.+.+.+..... ....
T Consensus 170 ~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~~~~~~~--~~~~ 245 (360)
T 3hdo_A 170 YIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSY-SLAGMRIGLAIAR-PEVIAALDKIRD--HYNL 245 (360)
T ss_dssp HHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTT-SCTTSCCEEEECC-HHHHHHHHHHSC--SCCS
T ss_pred HHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhh-cCCccceeeEeeC-HHHHHHHHHhCC--CCCC
Confidence 9999999999999999999842 111222346789999999999 6678899999986 445554443332 2344
Q ss_pred ChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHH
Q 021783 157 APFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALS 233 (307)
Q Consensus 157 ~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (307)
+...+..+...++. +....+...++.+.+.+.+++. ++ .+ . +..++++++.+++.+ .
T Consensus 246 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~-~~-~----------------~~~~~~~~~~~~~~~-~ 305 (360)
T 3hdo_A 246 DRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GY-DV-I----------------PSQGNYLFATPPDRD-G 305 (360)
T ss_dssp CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TC-EE-C----------------CCSSSEEEEECTTCC-H
T ss_pred CHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CC-EE-c----------------CCCccEEEEECCCCC-H
Confidence 55555555555543 3445556666777777777654 22 11 1 123667778776543 6
Q ss_pred HHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHh
Q 021783 234 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 303 (307)
Q Consensus 234 ~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~ 303 (307)
..+.+.|.++||.++.|.. + ..++++|||++. ++++++++.|++.-+
T Consensus 306 ~~l~~~l~~~gi~v~~~~~------~-----------------~~~~~iRis~~~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 306 KRVYDGLYARKVLVRHFSD------P-----------------LLAHGMRISIGTREEMEQTLAALKEIGE 353 (360)
T ss_dssp HHHHHHHHHTTEECBCCCS------T-----------------TTTTSEEEECCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCEEEEECCC------C-----------------CCCCEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 7788888889999887553 0 124679999985 567777777766544
No 88
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.94 E-value=2.4e-26 Score=201.75 Aligned_cols=259 Identities=15% Similarity=0.176 Sum_probs=177.6
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcCC-CceEEE-EeCCCCCccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGP-WTKLVW-VESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~~-~~~~v~-~~~~~n~tG~ 75 (307)
|+ .++.+++++||+|+++.|+|+++. ..++..|++++.++.+ |++++++.+++ ++++|+ +++|+||||.
T Consensus 103 al~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~ 178 (397)
T 2zyj_A 103 ALDLVGKVFLDEGSPVLLEAPSYMGAI----QAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGG 178 (397)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHTTCCEEEEEEEETTEECHHHHHHHHHHCCCSCEEECCBSCTTTCC
T ss_pred HHHHHHHHhCCCCCEEEEeCCCcHHHH----HHHHHcCCEEEecCcCCCCCCHHHHHHHHhhcCCeEEEECCCCcCCCCC
Confidence 45 355567899999999999998887 5566789999988863 88999999874 788874 6899999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----CccCC------CccEEEeccccccccCCCceeEEEEEcChhH
Q 021783 76 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLEL------GADIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 76 ~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~~~~------~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
+++ +++|.++|++||+++|+|++|+.+... ....+ +.+++++|+||++ + +|+|+|+++++++ +
T Consensus 179 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~-~G~r~G~~~~~~~-~ 255 (397)
T 2zyj_A 179 LTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVL-S-PGLRVAFAVAHPE-A 255 (397)
T ss_dssp BCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTT-C-GGGCCEEEECCHH-H
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccc-c-ccceeEEEecCHH-H
Confidence 987 559999999999999999999864321 22222 4559999999999 5 7889999999844 5
Q ss_pred HHHHHHHHHhcCCCCChhhHHHHhhcccc-----HHHHHHHHHHHHHHHHHHHhcC-C-CccEEecCCCCCCCchHHHhh
Q 021783 142 AKELYFLQNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASH-P-RVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~-~-~~~~~~~~~l~~~~~~~~~~~ 214 (307)
.+.+...........+...+..+...++. +....+.+.++.+.+.+.|++. + ++ .+..
T Consensus 256 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~-~~~~-------------- 320 (397)
T 2zyj_A 256 LQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEV-RYTR-------------- 320 (397)
T ss_dssp HHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTS-EECC--------------
T ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCe-EEcc--------------
Confidence 55454433332222344455554444442 2333444455666666666542 2 12 1111
Q ss_pred hccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc---CCh
Q 021783 215 QAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDV 291 (307)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~ 291 (307)
...+.++++.++...+..++.+.|..+||.++.|..|.. .+..++++|||++. +++
T Consensus 321 --~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~-------------------~~~~~~~iRis~~~~~~~~i 379 (397)
T 2zyj_A 321 --PKGGMFVWMELPKGLSAEGLFRRALEENVAFVPGGPFFA-------------------NGGGENTLRLSYATLDREGI 379 (397)
T ss_dssp --CSBSSEEEEECSTTCCHHHHHHHHHHTTEEEEESGGGCT-------------------TSCCTTEEEEECSSSCHHHH
T ss_pred --CCccEEEEEEcCCCCCHHHHHHHHHHCCCEEechHHhcC-------------------CCCCCCeEEEEcCCCCHHHH
Confidence 113567778875432367788888888999988765321 01135789999986 567
Q ss_pred HHHHHHHHHHHhc
Q 021783 292 NDLISDLDKALRT 304 (307)
Q Consensus 292 ~~~i~~l~~~l~~ 304 (307)
++.++.|.+++++
T Consensus 380 ~~~~~~l~~~l~~ 392 (397)
T 2zyj_A 380 AEGVRRLGRALKG 392 (397)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7778888777654
No 89
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.94 E-value=1.1e-25 Score=202.89 Aligned_cols=259 Identities=12% Similarity=0.061 Sum_probs=172.0
Q ss_pred HH-HHHHHhc-CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-------CChHHHHhhcCC------CceEEEEe
Q 021783 3 AL-AAVTHLL-GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIGP------WTKLVWVE 67 (307)
Q Consensus 3 al-~~~~~~~-~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~------~~~~v~~~ 67 (307)
|+ .++.+++ ++||+|++++|+|+++. ..++..|++++.++. .|+++|++.+++ ++++|+++
T Consensus 169 al~~~~~~l~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~ 244 (500)
T 3tcm_A 169 GVHLMMQLLIRNEKDGILVPIPQYPLYS----ASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVI 244 (500)
T ss_dssp HHHHHHHHHCCSTTEEEEEEESCCTHHH----HHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHcCCCCCEEEEeCCCcHhHH----HHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEE
Confidence 45 3445566 79999999999998887 566778999999984 378999999875 78999999
Q ss_pred CCCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC------Cc----------cCCCccEEEeccccccccCCC
Q 021783 68 SPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS------RP----------LELGADIVMHSATKFIAGHSD 128 (307)
Q Consensus 68 ~~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~------~~----------~~~~~d~~~~s~~K~~~g~~g 128 (307)
+|+||||.+++ +++|+++|++||+++|+|++|+...+. .. ......++++|+||.+.|.+|
T Consensus 245 ~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G 324 (500)
T 3tcm_A 245 NPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECG 324 (500)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGG
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCc
Confidence 99999999986 677778899999999999999864331 11 111235888999999866789
Q ss_pred ceeEEEEEc--ChhHHHHHHHHHHhcCCCCChhhHHHHhhccc--------------cHHHHHHHHHHHHHHHHHHHhcC
Q 021783 129 VMAGVLAVK--GERLAKELYFLQNAEGSGLAPFDCWICLRGVK--------------TMALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 129 ~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------------~~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
+|+||+++. ++.+.+.+..... .....+...+..+...++ ......+.+.++++.+.+.|++.
T Consensus 325 ~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 403 (500)
T 3tcm_A 325 KRGGYFEITGFSAPVREQIYKIAS-VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKL 403 (500)
T ss_dssp GCCEEEEEESCCTTHHHHHHHHHH-TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cceEEEEEeCCCHHHHHHHHHHHh-cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999982 3445555544443 222333334443333332 22333445566666777777655
Q ss_pred CCccEEecCCCCCCCchHHHhhhccCCCceEEE-EeCC-HH------------HHHHHHhcCCcceeecCCCCccceeec
Q 021783 193 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LTGS-LA------------LSKHVVETTKYFSITVSFGSVKSLISM 258 (307)
Q Consensus 193 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~------------~~~~~~~~l~~~gi~v~~g~~~~~~~~ 258 (307)
+++. +. ...++++.| .+.- .. +...+.+.+.+.||.+.+|+.|..
T Consensus 404 ~g~~--------------~~----~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~--- 462 (500)
T 3tcm_A 404 EGIT--------------CN----EAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQ--- 462 (500)
T ss_dssp TTEE--------------CC----CCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCC---
T ss_pred CCcE--------------Ee----cCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCC---
Confidence 3321 11 112344433 3321 11 111234556678999999887441
Q ss_pred ccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 021783 259 PCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 304 (307)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 304 (307)
..+.+++|+|++. +++++.++.|.+++++
T Consensus 463 -----------------~~g~~~iRis~~~~~e~i~~~i~~l~~~~~~ 493 (500)
T 3tcm_A 463 -----------------VPGTWHFRCTILPQEDKIPAVISRFTVFHEA 493 (500)
T ss_dssp -----------------CTTCCBEEEESCSCTTTHHHHHHHHHHHHHH
T ss_pred -----------------CCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 0135679999985 6788889999888754
No 90
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.94 E-value=1.5e-25 Score=198.98 Aligned_cols=257 Identities=15% Similarity=0.137 Sum_probs=175.8
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcc-cCCcEEEEecCC-------ChHHHHhhcCC------CceEEEEe
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTC-------DLDEVASAIGP------WTKLVWVE 67 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~-------d~~~l~~~l~~------~~~~v~~~ 67 (307)
|+ .++.+++++||+|+++.|+|.++. ..+. ..|++++.++.+ |++++++.+++ ++++|+++
T Consensus 123 a~~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~ 198 (435)
T 3piu_A 123 ANETFIFCLADPGEAVLIPTPYYPGFD----RDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVT 198 (435)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHH----HHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCCeEEECCCccccHH----HHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 44 455667899999999999998887 4455 689999999874 78999998864 89999999
Q ss_pred CCCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-----Cc----cC---------CCccEEEeccccccccC
Q 021783 68 SPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RP----LE---------LGADIVMHSATKFIAGH 126 (307)
Q Consensus 68 ~~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~----~~---------~~~d~~~~s~~K~~~g~ 126 (307)
+|+||||.+++ +++|+++|++||+++|+|++|+.+.+. .. .+ .+.+++++|+||.+ |.
T Consensus 199 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~-g~ 277 (435)
T 3piu_A 199 NPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL-GL 277 (435)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSS-CC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeeccc-CC
Confidence 99999999986 588899999999999999999753221 11 11 34459999999999 66
Q ss_pred CCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhcccc-------HHHHHHHHHHHHHHHHHHHhcCCCccEEe
Q 021783 127 SDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLASHPRVKKVN 199 (307)
Q Consensus 127 ~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 199 (307)
+|+|+|+++++++.+.+.+....... ..+...+..+...++. +....+.+.++.+.+.+.+++. ++ .+
T Consensus 278 ~G~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~- 352 (435)
T 3piu_A 278 PGFRVGAIYSNDDMVVAAATKMSSFG--LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GI-SC- 352 (435)
T ss_dssp GGGCEEEEEESCHHHHHHHHHHGGGS--CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TC-EE-
T ss_pred CceeEEEEEeCCHHHHHHHHHHhhcC--CCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC-cc-
Confidence 78999999997776666555443322 2233333333333322 1233444455556666666643 11 11
Q ss_pred cCCCCCCCchHHHhhhccCCCceEEEEeCCH------HHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHH
Q 021783 200 YAGLPEHPGHELHYSQAKGAGSVLSFLTGSL------ALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVR 272 (307)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~ 272 (307)
.+ ...+.++++.++.. +...++.+.+..+ ||.+++|..|..
T Consensus 353 ~~---------------~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----------------- 400 (435)
T 3piu_A 353 LN---------------GNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHC----------------- 400 (435)
T ss_dssp CC---------------CCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTC-----------------
T ss_pred cC---------------CCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCC-----------------
Confidence 00 11246777777542 1356677776545 999888765331
Q ss_pred HhcCCCCCeEEEEecc---CChHHHHHHHHHHHhcC
Q 021783 273 QARGLTEDLVRISVGI---EDVNDLISDLDKALRTG 305 (307)
Q Consensus 273 ~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~~ 305 (307)
..++++||+++. +++++.++.|.++++++
T Consensus 401 ----~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~~ 432 (435)
T 3piu_A 401 ----TEPGWFRVCFANLPERTLDLAMQRLKAFVGEY 432 (435)
T ss_dssp ----SSTTEEEEECSSSCHHHHHHHHHHHHHHHHHH
T ss_pred ----CCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHH
Confidence 136789999975 67888888888877653
No 91
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.94 E-value=8e-26 Score=200.48 Aligned_cols=254 Identities=13% Similarity=0.108 Sum_probs=178.2
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhccc-CCcEEEEecCC------ChHHHHhhcCC---CceEEEEeCCCC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK-TGVVVKRVNTC------DLDEVASAIGP---WTKLVWVESPTN 71 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~-~g~~~~~v~~~------d~~~l~~~l~~---~~~~v~~~~~~n 71 (307)
|+ .++.+++++||+|++++|+|+++. ..++. .|++++.++.+ |++++++.+++ +++++++++|+|
T Consensus 125 al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~n 200 (430)
T 2x5f_A 125 GLSLVGDLFVNQDDTILLPEHNWGNYK----LVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNN 200 (430)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCTHHH----HHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCT
T ss_pred HHHHHHHHHhCCCCEEEEcCCcCccHH----HHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCC
Confidence 45 455567899999999999999887 55677 89999998862 68899998875 889999999999
Q ss_pred Ccccccc---HHHHHHHHHH-----cCCEEEEeCccCCCCcC-----Ccc----C-CCc---cEEEeccccccccCCCce
Q 021783 72 PRQQICD---IRKIAEMAHA-----HGALLLVDNSIMSPVLS-----RPL----E-LGA---DIVMHSATKFIAGHSDVM 130 (307)
Q Consensus 72 ~tG~~~~---~~~l~~~~~~-----~~~~li~D~a~~~~~~~-----~~~----~-~~~---d~~~~s~~K~~~g~~g~~ 130 (307)
|||.+++ +++|.++|++ ||+++|+|++|+..... ... . .+. +++++|+||++ |.+|+|
T Consensus 201 ptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r 279 (430)
T 2x5f_A 201 PTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEF-FAWGFR 279 (430)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHT-TCGGGC
T ss_pred CCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCC-CCCCCC
Confidence 9999998 8999999999 99999999999753321 111 2 356 89999999999 667899
Q ss_pred eEEEEE---cChhHHHHHHHHHHh----cCCCCChhhHHHHhhccc-c---HHH---HHHHHHHHHHHHHHHHhcCC-Cc
Q 021783 131 AGVLAV---KGERLAKELYFLQNA----EGSGLAPFDCWICLRGVK-T---MAL---RVEKQQDNAQKIAEFLASHP-RV 195 (307)
Q Consensus 131 ~G~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~-~---~~~---~~~~~~~~~~~l~~~l~~~~-~~ 195 (307)
+|++++ + +.+.+.+...... .....+...+..+...++ . .+. ..+.+.++.+.+.+.|+++. ..
T Consensus 280 iG~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 358 (430)
T 2x5f_A 280 VGFMTFGTSD-QTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHS 358 (430)
T ss_dssp CEEEEEBCCC-HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT
T ss_pred eEEEEEecCC-HHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999999 5 4455555444333 334455566666655555 3 222 34444555566666665220 00
Q ss_pred cEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCc-ceeecCCCCccceeecccccCCCCCcHHHHHh
Q 021783 196 KKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQA 274 (307)
Q Consensus 196 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~ 274 (307)
.+.. . . ...+.++++.+++. +...+.+.|.. +||.+++|.
T Consensus 359 -g~~~-----------~--~-~~~g~~~~~~~~~~-~~~~~~~~l~~~~gi~v~~g~----------------------- 399 (430)
T 2x5f_A 359 -HWQA-----------Y--D-FNSGYFMAIKVHDV-DPEALRKHLIDKYSIGVIALN----------------------- 399 (430)
T ss_dssp -TEEE-----------C--C-CCBSSEEEEEESSS-CHHHHHHHHHHHHCEECEECS-----------------------
T ss_pred -Ccee-----------e--C-CCceEEEEeCCCCC-CHHHHHHHHHHhCCEEEecCC-----------------------
Confidence 0100 0 0 11234577777633 36678888876 899887651
Q ss_pred cCCCCCeEEEEec---cCChHHHHHHHHHHHhcC
Q 021783 275 RGLTEDLVRISVG---IEDVNDLISDLDKALRTG 305 (307)
Q Consensus 275 ~~~~~~~iRis~~---~~~~~~~i~~l~~~l~~~ 305 (307)
++++|||++ .+++++.++.|.++++++
T Consensus 400 ----~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 400 ----ATDIRIAFSCVEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp ----SSEEEEEGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred ----CCeEEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 456999998 377899999999888653
No 92
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.94 E-value=8.1e-26 Score=199.17 Aligned_cols=253 Identities=15% Similarity=0.104 Sum_probs=178.4
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCC-CceEEEEeCCCCCccccccHHHHH
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIA 83 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~~~~l~ 83 (307)
.++.+++++||+|++++|.|+++. ..++..|++++.++..|++++++.+.+ ++++|++++++||||.+.++++|.
T Consensus 134 ~~l~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~ 209 (409)
T 3kki_A 134 GLLQTICQPNTNVYIDFFAHMSLW----EGARYANAQAHPFMHNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELV 209 (409)
T ss_dssp HHHHHHCCTTCEEEEETTSCHHHH----HHHHHTTCEEEEECTTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHH
T ss_pred HHHHHhcCCCCEEEECCCcCHHHH----HHHHHcCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHH
Confidence 566778899999999999998887 455677999999999999999999974 589999999999999999999999
Q ss_pred HHHHHcCCEEEEeCccCCCCcC-C--------ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH-hcC
Q 021783 84 EMAHAHGALLLVDNSIMSPVLS-R--------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEG 153 (307)
Q Consensus 84 ~~~~~~~~~li~D~a~~~~~~~-~--------~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~-~~~ 153 (307)
++|++||+++|+|++|+.+.+. . ....+.|++++|+||++++ + +|+++++++........... ..+
T Consensus 210 ~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~-~---gg~v~~~~~~~~~~~~~~~~~~~~ 285 (409)
T 3kki_A 210 NISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAY-R---AGAIWCNNEVNRCVPFISYPAIFS 285 (409)
T ss_dssp HHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCS-S---CEEEEESSSGGGTHHHHCHHHHHS
T ss_pred HHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCC-C---ceEEEECHHHHHHHHHhCcCcccc
Confidence 9999999999999999865431 0 1112578999999999953 3 69999887644332221111 122
Q ss_pred CCCChhhHHHHhhccccH---HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH
Q 021783 154 SGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 230 (307)
Q Consensus 154 ~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (307)
...++.....+..+++.+ ....++..++.+.+.+.|++.. +. . .+.+.++++.+++.
T Consensus 286 ~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~-~----------~~~~~~~~~~~~~~ 345 (409)
T 3kki_A 286 STLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLG---------LT-I----------RSESQIIGLETGDE 345 (409)
T ss_dssp BCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTT---------CC-C----------CCSSSEEEEEEESH
T ss_pred CCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC---------Cc-c----------CCCCCEEEEEeCCH
Confidence 234444444444444433 3334455566666777776541 10 0 12467888888766
Q ss_pred HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 231 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 231 ~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
.....+.+.|.++||.++.+.. |. ....++++|++++. ++++++++.|.++++..
T Consensus 346 ~~~~~~~~~L~~~Gv~v~~~~~------~~--------------~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 404 (409)
T 3kki_A 346 RNTEKVRDYLESNGVFGSVFCR------PA--------------TSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYG 404 (409)
T ss_dssp HHHHHHHHHHHHTTEECEEECT------TS--------------SCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHCCceEeeeCC------CC--------------cCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhcC
Confidence 5677888888888997765322 10 11235789999974 66777777777777653
No 93
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.94 E-value=4.2e-26 Score=195.71 Aligned_cols=244 Identities=15% Similarity=0.160 Sum_probs=169.3
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
++.++...+ +||+|++++|+|+++. ..++..|++++.++.+ |++++++. .+++++++++|+||||.++
T Consensus 80 ~l~~~~~~~-~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~ 152 (337)
T 3p1t_A 80 CFDRISAEF-SSMRFVTAWPGFDGYR----ARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQAL 152 (337)
T ss_dssp HHHHHHHHS-TTSEEEEESSSCSHHH----HHHTTSCCEEEEECBCTTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCC
T ss_pred HHHHHHHhc-CCCeEEEeCCCcHHHH----HHHHHcCCEEEEecCCCCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCC
Confidence 454444444 9999999999999887 6677889999999864 78888776 4689999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCccCCCC--cC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCC
Q 021783 78 DIRKIAEMAHAHGALLLVDNSIMSPV--LS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 154 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~~~~~--~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~ 154 (307)
|.+++.++|+++++ +|+|++|+... .. .....+.+++++|+||++ |++|+|+|+++++++ +.+.+.... ...
T Consensus 153 ~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~~~~~-~~~~l~~~~--~~~ 227 (337)
T 3p1t_A 153 SAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSY-GLAGLRLGALFGPSE-LIAAMKRKQ--WFC 227 (337)
T ss_dssp CHHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTT-CCTTTCCEEEECCHH-HHHHHHTTS--CTT
T ss_pred CHHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEeeCchhc-cCcchheEEEEeCHH-HHHHHHhhc--CCC
Confidence 99999999999997 56699997321 11 223346789999999999 678999999998755 433333221 122
Q ss_pred CCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHH
Q 021783 155 GLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 231 (307)
Q Consensus 155 ~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (307)
..+...+..+...++. +....++..++.+.+.+.|++. ++ .-. ...++++++...+.
T Consensus 228 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~--------~~~----------~~~~~~~~~~~~~~- 287 (337)
T 3p1t_A 228 NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GY--------RVA----------SSEANFVLVENAAG- 287 (337)
T ss_dssp CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TC--------CBC----------CCSSSEEEEECTTT-
T ss_pred CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cC--------EEC----------CCCCeEEEEEcCCH-
Confidence 3344444444444443 3445555666666777777654 11 101 11356777777543
Q ss_pred HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHh
Q 021783 232 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 303 (307)
Q Consensus 232 ~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~ 303 (307)
..+.+.|..+||.++.|..|. .++++|||++. ++++++++.|++.++
T Consensus 288 --~~~~~~l~~~gi~v~~g~~~~-----------------------~~~~iRis~~~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 288 --ERTLRFLRERGIQVKDAGQFG-----------------------LHHHIRISIGREEDNDRLLAALAEYSD 335 (337)
T ss_dssp --HHHHHHHHHTTEECEEGGGGT-----------------------CCSEEEEECCCHHHHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHCCeEEEECccCC-----------------------CCCeEEEecCCHHHHHHHHHHHHHHhh
Confidence 345566677899998877632 14679999986 577777777776654
No 94
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.94 E-value=8.6e-27 Score=204.18 Aligned_cols=257 Identities=14% Similarity=0.151 Sum_probs=175.5
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-----CChHHHHhhcCC-CceEEEEeCCCCCcccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAIGP-WTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~ 78 (307)
.++.+++++||+|++++++|+++. +...++..|++++.++. .|++++++.+++ ++++|++++++||||.+.|
T Consensus 85 ~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~ 162 (393)
T 2huf_A 85 ATLCNLLEDGDVILIGHTGHWGDR--SADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQG 162 (393)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC
T ss_pred HHHHHHhCCCCEEEEECCCcchHH--HHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCC
Confidence 455557899999999999997743 33455678999999986 389999999987 8999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH----HHh--
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----QNA-- 151 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~----~~~-- 151 (307)
+++|.++|++||+++|+|++|+.+..+ +...+++|++++|+||+++|++| .|+++++++ +.+.+... ..+
T Consensus 163 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~g~~G--~G~~~~~~~-~~~~~~~~~~~~~~~~~ 239 (393)
T 2huf_A 163 LEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLGAPPG--ITPVSFSHR-AVERYKRRNTKVKVYYW 239 (393)
T ss_dssp CTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTCCCSS--CEEEEECHH-HHHHHHTCSSCCSCGGG
T ss_pred HHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEECCCcccccCCC--eEEEEECHH-HHHHHhhcCCCCceEEE
Confidence 999999999999999999999877654 44456899999999999878888 599999754 44433321 000
Q ss_pred --------cC---------CCCChhhHHHHhhcccc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCch
Q 021783 152 --------EG---------SGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH 209 (307)
Q Consensus 152 --------~~---------~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~ 209 (307)
.+ .+.+.........+++. +....++..++.+.+.+.|++. ++ .-.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~--------~~~--- 307 (393)
T 2huf_A 240 DMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA-GF--------ELY--- 307 (393)
T ss_dssp CHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC--------CBS---
T ss_pred chHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CC--------eec---
Confidence 00 12222222222223322 3334555666667777777654 21 000
Q ss_pred HHHhhhccCCCceEEEEeCCHHHHHHHHhcCCc-ceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe-c
Q 021783 210 ELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-G 287 (307)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~ 287 (307)
.+.....+.++++.++......++.+.|.. .||.++.|..+. .++++||++ +
T Consensus 308 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~-----------------------~~~~~Ri~~~~ 361 (393)
T 2huf_A 308 ---ADPKDRLSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGGLGPT-----------------------AGQVFRIGLMG 361 (393)
T ss_dssp ---SCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCGGG-----------------------TTTEEEEECCG
T ss_pred ---cCccccCCcEEEEEcCCCCCHHHHHHHHHHhCCEEEecCcccc-----------------------cCCEEEEEccc
Confidence 000011244777887532236677777765 499998776421 256799999 5
Q ss_pred c----CChHHHHHHHHHHHhc
Q 021783 288 I----EDVNDLISDLDKALRT 304 (307)
Q Consensus 288 ~----~~~~~~i~~l~~~l~~ 304 (307)
. ++++++++.|.+++++
T Consensus 362 ~~~~~e~i~~~~~~l~~~~~~ 382 (393)
T 2huf_A 362 QNATTERVDRVLQVFQEAVAA 382 (393)
T ss_dssp GGCSHHHHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHH
Confidence 2 4578888888887754
No 95
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.2e-25 Score=198.52 Aligned_cols=247 Identities=12% Similarity=0.084 Sum_probs=168.2
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-----------------CChHHHHhhcCCCceEE
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----------------CDLDEVASAIGPWTKLV 64 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----------------~d~~~l~~~l~~~~~~v 64 (307)
|+ .++.+++++||+|++++|.|+++. ..++..|++++.++. .|+++|++++++++++|
T Consensus 130 al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 205 (447)
T 3b46_A 130 GILSCLMGLLNAGDEVIVFEPFFDQYI----PNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAV 205 (447)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEE
T ss_pred HHHHHHHHHcCCCCEEEEeCCCchhHH----HHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEE
Confidence 44 455667899999999999999887 556778999888874 27899999999899999
Q ss_pred EEeCCCCCccccc---cHHHHHHHHHHcCCEEEEeCccCCCCc----CCc-----cCCCccEEEeccccccccCCCceeE
Q 021783 65 WVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVL----SRP-----LELGADIVMHSATKFIAGHSDVMAG 132 (307)
Q Consensus 65 ~~~~~~n~tG~~~---~~~~l~~~~~~~~~~li~D~a~~~~~~----~~~-----~~~~~d~~~~s~~K~~~g~~g~~~G 132 (307)
++++|+||||.++ ++++|+++|++||+++|+|++|+...+ ... ...+.+++++|+||++ +.+|+|+|
T Consensus 206 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~-~~~G~riG 284 (447)
T 3b46_A 206 IINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSF-AATGWRIG 284 (447)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHT-TCTTSCCE
T ss_pred EEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhc-CCcchhhE
Confidence 9999999999997 499999999999999999999985322 111 1347899999999999 66789999
Q ss_pred EEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCC
Q 021783 133 VLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 206 (307)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~ 206 (307)
+++++++.+.+.+...........+...+..+...++. +....+...++.+.+.+.|++. ++. +..
T Consensus 285 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~------ 356 (447)
T 3b46_A 285 WVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-GLP-YTA------ 356 (447)
T ss_dssp EEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCC-EEC------
T ss_pred EEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecC------
Confidence 99993355555555544434444444445444444432 2223444455556666666543 111 110
Q ss_pred CchHHHhhhccCCCceEEEEeCCH---------------HHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHH
Q 021783 207 PGHELHYSQAKGAGSVLSFLTGSL---------------ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVE 270 (307)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~ 270 (307)
...+.++++.++.. ....++.+.+. ++||.+.+|..|... +.
T Consensus 357 ----------~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~--~~---------- 414 (447)
T 3b46_A 357 ----------PEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIK--EH---------- 414 (447)
T ss_dssp ----------CSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCG--GG----------
T ss_pred ----------CCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCC--Cc----------
Confidence 11355667776531 23567777665 579999888764311 00
Q ss_pred HHHhcCCCCCeEEEEecc
Q 021783 271 VRQARGLTEDLVRISVGI 288 (307)
Q Consensus 271 ~~~~~~~~~~~iRis~~~ 288 (307)
.+..++++|+|++.
T Consensus 415 ----~~~~~~~iRls~~~ 428 (447)
T 3b46_A 415 ----EKAAENLLRFAVCK 428 (447)
T ss_dssp ----GGGGTTEEEEECCS
T ss_pred ----cCCCCCEEEEEEeC
Confidence 01125789999985
No 96
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.94 E-value=1.2e-25 Score=193.83 Aligned_cols=253 Identities=13% Similarity=0.050 Sum_probs=173.3
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
.++.+++++||+|++++++|+++. +...++..|++++.++.+ |++++++ +++++|++++++||||.+.|+
T Consensus 66 ~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~l 140 (352)
T 1iug_A 66 ALVKNLFAPGERVLVPVYGKFSER--FYEIALEAGLVVERLDYPYGDTPRPEDVAK---EGYAGLLLVHSETSTGALADL 140 (352)
T ss_dssp HHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCTTTSCC---SSCSEEEEESEETTTTEECCH
T ss_pred HHHHhccCCCCeEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCCCCCHHHHhc---cCCcEEEEEEecCCcceecCH
Confidence 455567899999999999998875 334556789999999873 5666665 678999999999999999999
Q ss_pred HHHHHHHHHc--CCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHH--------HH--
Q 021783 80 RKIAEMAHAH--GALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE--------LY-- 146 (307)
Q Consensus 80 ~~l~~~~~~~--~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~--------~~-- 146 (307)
++|.++|++| |+++|+|++|+.+..+ +...++.|++++|+||+++++.| .|+++++++.+... +.
T Consensus 141 ~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~ 218 (352)
T 1iug_A 141 PALARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYLDLARE 218 (352)
T ss_dssp HHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTTCHHHH
T ss_pred HHHHHHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccccCCCc--eeEEEECHHHHHHhhCCCceeeHHHH
Confidence 9999999999 9999999999876654 44455799999999998778777 79999986644220 11
Q ss_pred --HHH-HhcCCCCChhhHHHHhhccc----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 147 --FLQ-NAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 147 --~~~-~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
... .....+.+.........+++ .+....++..++.+.+.+.|++. ++ .+..+ ...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~---------------~~~ 281 (352)
T 1iug_A 219 LKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG-GL-RPVPK---------------RFS 281 (352)
T ss_dssp HHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT-TC-EESCS---------------SBC
T ss_pred HhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CC-ccccc---------------ccC
Confidence 110 11112233333322223322 23445566667777777777754 22 11111 013
Q ss_pred CceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHH
Q 021783 220 GSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLI 295 (307)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i 295 (307)
++++++.+++.....++.+.|..+||.++.|... ..++++|++++. +++++++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~-----------------------~~~~~iRi~~~~~~~~~~i~~~~ 338 (352)
T 1iug_A 282 PAVAAFYLPEGVPYARVKEAFAQRGAVIAGGQGP-----------------------LKGKVFRLSLMGAYDRYEALGVA 338 (352)
T ss_dssp TTCEEEECCTTCCHHHHHHHHHTTTEECEECCGG-----------------------GTTTEEEECCCSSCCHHHHHHHH
T ss_pred CeEEEEEcCCCCCHHHHHHHHHHCCEEEEeCCCc-----------------------cCCCEEEEEccccCCHHHHHHHH
Confidence 5678888763223677888888889988876520 025679999984 5677777
Q ss_pred HHHHHHHhc
Q 021783 296 SDLDKALRT 304 (307)
Q Consensus 296 ~~l~~~l~~ 304 (307)
+.|.+++++
T Consensus 339 ~~l~~~~~~ 347 (352)
T 1iug_A 339 GMFREVLEE 347 (352)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776653
No 97
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.94 E-value=3.5e-26 Score=203.87 Aligned_cols=258 Identities=15% Similarity=0.116 Sum_probs=175.8
Q ss_pred cHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcE----------EEEecCCChHHHHhhcC--CCceEEEEeCC
Q 021783 2 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV----------VKRVNTCDLDEVASAIG--PWTKLVWVESP 69 (307)
Q Consensus 2 aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~d~~~l~~~l~--~~~~~v~~~~~ 69 (307)
.++.++.+++++||+|++++|+|+++. ..++..|++ ++.++.++.+.+...+. +++++|++++|
T Consensus 143 ~al~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p 218 (449)
T 3qgu_A 143 CDIARIQMMFGSKPTVAVQDPSYPVYV----DTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSP 218 (449)
T ss_dssp HHHHHHHHHHCSSSCEEEEESCCTHHH----HHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGCCCCSEEEEESS
T ss_pred HHHHHHHHHhCCCCEEEEcCCCChhHH----HHHHHcCCcccccccccceeEEEecccccCCcCChhHcCCCCEEEEeCC
Confidence 355455678899999999999999888 555667777 88888764333222222 57899999999
Q ss_pred CCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCc----C-Ccc----CCCccEEEeccccccccCCCceeEEEEEc
Q 021783 70 TNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL----S-RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVK 137 (307)
Q Consensus 70 ~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~----~-~~~----~~~~d~~~~s~~K~~~g~~g~~~G~~~~~ 137 (307)
+||||.+++ +++|+++|++||+++|+|++|+.... + ... ..+.+++++|+||++ |.+|+|+|+++++
T Consensus 219 ~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~ 297 (449)
T 3qgu_A 219 NNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYA-GFTGVRLGWTVVP 297 (449)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGG-TCTTCCCEEEECC
T ss_pred CCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhc-CCccceeEEEecC
Confidence 999999986 88889999999999999999974221 1 111 135789999999999 6778999999998
Q ss_pred ChhHHH-------HHHHHHHhcCCCCChhhHHHHhhcccc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCC
Q 021783 138 GERLAK-------ELYFLQNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE 205 (307)
Q Consensus 138 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~ 205 (307)
++.... .+...........+...+..+...++. +....+.+.++.+.+.+.|++. ++. +..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~----- 370 (449)
T 3qgu_A 298 KALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFS-VYG----- 370 (449)
T ss_dssp TTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-EEE-----
T ss_pred HHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-eeC-----
Confidence 765431 333334333344555555555555543 3344555566667777777654 111 110
Q ss_pred CCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEE
Q 021783 206 HPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRI 284 (307)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRi 284 (307)
...+.++++.+++. ...++.+.|..+ ||.+++|..|.. ..++++||
T Consensus 371 -----------~~~~~~~~~~~~~~-~~~~~~~~l~~~~gI~v~pg~~f~~---------------------~~~~~iRi 417 (449)
T 3qgu_A 371 -----------GDDAPYIWVGFPGK-PSWDVFAEILERCNIVTTPGSGYGP---------------------AGEGFVRA 417 (449)
T ss_dssp -----------SSSSSEEEEECTTS-CHHHHHHHHHHHHCEECEEGGGGCG---------------------GGTTEEEE
T ss_pred -----------CCCeeEEEEECCCC-CHHHHHHHHHHHCCEEEecchHhCC---------------------CCCCeEEE
Confidence 11356777877633 356677666554 999988876431 12578999
Q ss_pred Eecc--CChHHHHHHHHHHHhc
Q 021783 285 SVGI--EDVNDLISDLDKALRT 304 (307)
Q Consensus 285 s~~~--~~~~~~i~~l~~~l~~ 304 (307)
|+.. +++++.++.|.+++++
T Consensus 418 s~~~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 418 SAFGSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp ECCSCHHHHHHHHHHHHHHHC-
T ss_pred EecCCHHHHHHHHHHHHHHHHh
Confidence 9854 7788888888888754
No 98
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.94 E-value=1.8e-26 Score=202.23 Aligned_cols=255 Identities=17% Similarity=0.189 Sum_probs=176.3
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcc--hHHHHhhhcccCCcEEEEecC-----CChHHHHhhcCC-CceEEEEeCCCCCc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGG--TDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAIGP-WTKLVWVESPTNPR 73 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~--~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~-~~~~v~~~~~~n~t 73 (307)
|+ .++.+++++||+|++++|+|++ +. ..++..|++++.++. .|++++++.+++ ++++|++++++|||
T Consensus 97 al~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt 172 (393)
T 1vjo_A 97 AMEATIANAVEPGDVVLIGVAGYFGNRLV----DMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETST 172 (393)
T ss_dssp HHHHHHHHHCCTTCEEEEEESSHHHHHHH----HHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTT
T ss_pred HHHHHHHhccCCCCEEEEEcCChhHHHHH----HHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCc
Confidence 44 4555678999999999999987 44 566778999999986 488999999987 89999999999999
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH----
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL---- 148 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~---- 148 (307)
|.+.|+++|.++|+++|+++|+|++|+.+..+ .....++|++++|+||+++++.+ +|+++++++.. +.+...
T Consensus 173 G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l~~~~~--~G~l~~~~~~~-~~~~~~~~~~ 249 (393)
T 1vjo_A 173 GARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPG--ASPFTMSSRAI-EKLQRRRTKV 249 (393)
T ss_dssp TEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSS--CEEEEECHHHH-HHHHTCSSCC
T ss_pred ceeccHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccccCCCc--eEEEEECHHHH-HHHhccCCCC
Confidence 99999999999999999999999999976654 44556889999999999976654 89999986533 333110
Q ss_pred HH---------------hcCC-CCChhhHHHHhhccccH-----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCC
Q 021783 149 QN---------------AEGS-GLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 207 (307)
Q Consensus 149 ~~---------------~~~~-~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~ 207 (307)
.. .... +.+...+..+..+++.+ ....++..++.+.+.+.|++. ++. + .+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-------~~ 320 (393)
T 1vjo_A 250 ANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLS-L-------HV 320 (393)
T ss_dssp SCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-B-------SS
T ss_pred CceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCc-c-------cC
Confidence 00 0111 33444444444444432 334555666667777777654 211 0 00
Q ss_pred chHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe
Q 021783 208 GHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 286 (307)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 286 (307)
+.....+.++++.++.......+.+.|..+ ||.++.|..+. .++++|||+
T Consensus 321 ------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----------------------~~~~iRis~ 371 (393)
T 1vjo_A 321 ------EKEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGEL-----------------------AGKVWRVGL 371 (393)
T ss_dssp ------CGGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGG-----------------------TTTEEEEEC
T ss_pred ------CccccCCcEEEEEcCCCCCHHHHHHHHHhhCCEEEecCcccc-----------------------CCCEEEEeC
Confidence 000012467788775333367788888777 99998876421 256799994
Q ss_pred -cc----CChHHHHHHHHHHH
Q 021783 287 -GI----EDVNDLISDLDKAL 302 (307)
Q Consensus 287 -~~----~~~~~~i~~l~~~l 302 (307)
+. ++++++++.|.+++
T Consensus 372 ~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 372 MGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp CGGGCSHHHHHHHHHHHHHHH
T ss_pred CccCChHHHHHHHHHHHHHHh
Confidence 43 24667777776665
No 99
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.94 E-value=5e-26 Score=198.19 Aligned_cols=256 Identities=12% Similarity=0.064 Sum_probs=171.2
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCcccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQI 76 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 76 (307)
|+ .++.+++++||+|+++++.|.+.. +...+...|++++.++.+ |++++++.++++++++++++++||||.+
T Consensus 83 al~~~~~~~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~ 160 (376)
T 3f0h_A 83 SMEAVVMNCFTKKDKVLVIDGGSFGHR--FVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVL 160 (376)
T ss_dssp HHHHHHHHHCCTTCCEEEEESSHHHHH--HHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCEEEEESEETTTTEE
T ss_pred HHHHHHHhccCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccCceEEEEecccCCccee
Confidence 44 455667899999999998776643 224566779998888763 8899999888899999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH-------
Q 021783 77 CDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL------- 148 (307)
Q Consensus 77 ~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~------- 148 (307)
.|+++|.++|++||+++|+|++|+.+..+ +...+++|++++|+||++++++| +|+++++++.. +.+...
T Consensus 161 ~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~-~~~~~~~~~~~~~ 237 (376)
T 3f0h_A 161 YDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLACPPG--ISVIVLAPRGV-ERVEKSKVRTMYF 237 (376)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTCCCSS--CEEEEECHHHH-HHHHTCCCCCSTT
T ss_pred cCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCcccccCCCc--eEEEEECHHHH-HHhhcCCCCceee
Confidence 99999999999999999999999987655 45556899999999999976788 78888876543 333210
Q ss_pred ------HHh----cCCCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHH
Q 021783 149 ------QNA----EGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 212 (307)
Q Consensus 149 ------~~~----~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~ 212 (307)
... ...+.+.........+++. ++...++..+..+.+.+.+++.+ +.. .
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~-----------~ 302 (376)
T 3f0h_A 238 DLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLP----FEL-----------V 302 (376)
T ss_dssp CHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSS----EEE-----------C
T ss_pred cHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC----Ccc-----------C
Confidence 000 0112222221223333332 22333344444455555554331 111 0
Q ss_pred hhhccCCCceEEEEeCCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc---
Q 021783 213 YSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--- 288 (307)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--- 288 (307)
.+ .....++.+...+.+ ..++.+.|.++ ||.++.|.. ...++++|+|++.
T Consensus 303 ~~--~~~~~~~~~~~~~~~-~~~l~~~l~~~~gi~v~~g~~-----------------------~~~~~~lRis~~~~~t 356 (376)
T 3f0h_A 303 SE--SPANGVTSVHPTTAN-AYDIFLKLKDEYGIWICPNGG-----------------------EMKDTIFRVGHIGALT 356 (376)
T ss_dssp CS--SBBTTEEEEEESSSC-HHHHHHHHHHHSSEECEECCG-----------------------GGTTTCEEEECCSSCC
T ss_pred cc--ccCceEEEEeCCCCC-HHHHHHHHHHhCCEEEecCcc-----------------------ccCCCEEEEecCCCCC
Confidence 00 112345555554433 67788888777 998887631 0125679999964
Q ss_pred -CChHHHHHHHHHHHhc
Q 021783 289 -EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 -~~~~~~i~~l~~~l~~ 304 (307)
++++++++.|.+++++
T Consensus 357 ~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 357 HEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 6778888888887764
No 100
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.94 E-value=2.4e-25 Score=200.53 Aligned_cols=259 Identities=15% Similarity=0.096 Sum_probs=174.2
Q ss_pred HH-HHHHHhcCCCC----eEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCC-----CceEEE
Q 021783 3 AL-AAVTHLLGTGE----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGP-----WTKLVW 65 (307)
Q Consensus 3 al-~~~~~~~~~gd----~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~-----~~~~v~ 65 (307)
|+ .++..++++|| +|+++.|+|+.+. ..++..|++++.++.+ |+++|++.+++ ++++|+
T Consensus 165 ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~----~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~ 240 (498)
T 3ihj_A 165 GISTILKILVSGGGKSRTGVMIPIPQYPLYS----AVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLC 240 (498)
T ss_dssp HHHHHHHHHCCCCGGGSEEEEEEESCCTHHH----HHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEE
T ss_pred HHHHHHHHHcCCCCCCCCEEEEeCCCchhHH----HHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEE
Confidence 45 34455778875 9999999999887 5567789999999875 88999999874 689999
Q ss_pred EeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCcCC------ccC-----------CCccEEEecccccccc
Q 021783 66 VESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR------PLE-----------LGADIVMHSATKFIAG 125 (307)
Q Consensus 66 ~~~~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~------~~~-----------~~~d~~~~s~~K~~~g 125 (307)
+++|+||||.+++ +++|+++|++||+++|+|++|+...+.. ... ....++++|+||.++|
T Consensus 241 l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G 320 (498)
T 3ihj_A 241 IINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMG 320 (498)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTC
T ss_pred EECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEecccccccc
Confidence 9999999999986 7789999999999999999998644321 111 0124789999999977
Q ss_pred CCCceeEEEEE--cChhHHHHHHHHHHhcCCCCChhhHHHHhhccc--------------cHHHHHHHHHHHHHHHHHHH
Q 021783 126 HSDVMAGVLAV--KGERLAKELYFLQNAEGSGLAPFDCWICLRGVK--------------TMALRVEKQQDNAQKIAEFL 189 (307)
Q Consensus 126 ~~g~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------------~~~~~~~~~~~~~~~l~~~l 189 (307)
.+|+|+||+++ .++.+.+.+...... ....+...+..+...++ ......+.+.++++.+.+.|
T Consensus 321 ~~G~R~G~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L 399 (498)
T 3ihj_A 321 ECGYRGGYMEVINLHPEIKGQLVKLLSV-RLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLF 399 (498)
T ss_dssp CSSSCCEEEEEESCCHHHHHHHHHHHHH-SCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccceEEEEEecCCHHHHHHHHHHHhc-cCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999985 456666666555442 22333344444433332 12233455667777777777
Q ss_pred hcCCCccEEecCCCCCCCchHHHhhhccCCCceEEE-EeCC------------HHHHHH-HHhcCCcceeecCCCCccce
Q 021783 190 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LTGS------------LALSKH-VVETTKYFSITVSFGSVKSL 255 (307)
Q Consensus 190 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~------------~~~~~~-~~~~l~~~gi~v~~g~~~~~ 255 (307)
++.+++. .. ...++++.| .+.. .+.... +.+.+.+.||.+.+|..|..
T Consensus 400 ~~~~g~~---~~---------------~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~ 461 (498)
T 3ihj_A 400 NQVPGIH---CN---------------PLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQ 461 (498)
T ss_dssp HTSTTEE---CC---------------CCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCC
T ss_pred hcCCCcE---ec---------------CCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCC
Confidence 7654321 10 112444443 4431 111122 35556678999998887431
Q ss_pred eecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 021783 256 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 304 (307)
Q Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 304 (307)
. .+++++|+|++. +++++.++.|.+++++
T Consensus 462 ~--------------------~~~~~~Ris~~~~~e~l~~~i~~L~~~~~~ 492 (498)
T 3ihj_A 462 R--------------------EGTYHFRMTILPPVEKLKTVLQKVKDFHIN 492 (498)
T ss_dssp C--------------------TTCCBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred C--------------------CCCCEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 0 135679999964 5777888888877654
No 101
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.94 E-value=3.2e-26 Score=199.29 Aligned_cols=274 Identities=17% Similarity=0.141 Sum_probs=183.4
Q ss_pred HH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.++ +++||+|+++.++|+++. ..++..|++++.++.+ |++++++.+++++++|+ ++||||
T Consensus 63 al~~~l~~l~~~~gd~Vi~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~---~~n~~G 135 (373)
T 3frk_A 63 ALHLILKGYDIGFGDEVIVPSNTFIATA----LAVSYTGAKPIFVEPDIRTYNIDPSLIESAITEKTKAII---AVHLYG 135 (373)
T ss_dssp HHHHHHHHTTCCTTCEEEEETTSCTHHH----HHHHHHSCEEEEECEETTTTEECGGGTGGGCCTTEEEEE---EECCTT
T ss_pred HHHHHHHHcCCCCcCEEEECCCCcHHHH----HHHHHcCCEEEEEeccccccCcCHHHHHHhcCCCCeEEE---EECCCc
Confidence 44 455666 899999999999999988 4466779999999875 89999999998999888 677999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccCCCCcCCccCCC--ccEEEeccc--cccccCCCceeEEEEEcChhHHHHHHHHHH
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQN 150 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~d~~~~s~~--K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~ 150 (307)
...|+++|.++|+++|+++|+|++|+.|...+....+ .|++++||+ |+++++.. +|+++.+++.+.+.+.....
T Consensus 136 ~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~l~~~g~--gg~~~~~~~~~~~~~~~~~~ 213 (373)
T 3frk_A 136 QPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKVGSLGDAAGFSFYPAKNLGSLGD--GGAVVTNDKDLAEKIKALSN 213 (373)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSS--CEEEEESCHHHHHHHHHHHB
T ss_pred CcccHHHHHHHHHHcCCEEEEECCcccCCEECCEeccccccEEEEeCcCCCccCccce--eEEEEeCCHHHHHHHHHHHh
Confidence 9999999999999999999999999987755444445 799999976 99954233 89999987767665555443
Q ss_pred hcC------------CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 151 AEG------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 151 ~~~------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
... ..+....+.+....++.++...++..++.+.+.+.++..+ + ..+.... ....
T Consensus 214 ~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~---~~~~~~~---------~~~~ 280 (373)
T 3frk_A 214 YGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPN-V---IIPVEAD---------YAKH 280 (373)
T ss_dssp TTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTT-E---ECCCCCT---------TEEC
T ss_pred cCcccCCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-e---EeccCCC---------CCce
Confidence 211 1234455555555555555555566666666666665443 1 1121100 0011
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCC----CCCcHHHHHhcCCCCCeEEEEeccCChHHH
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH----ASIPVEVRQARGLTEDLVRISVGIEDVNDL 294 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~----~~~~~~~~~~~~~~~~~iRis~~~~~~~~~ 294 (307)
....+.+... +...+.+.|..+||.++.+......+.|..... ..++..... .++.+|+|++....++.
T Consensus 281 ~~~~~~~~~~---~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~lrl~~~~~~t~~d 353 (373)
T 3frk_A 281 VWYTFVIRSE---KRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKI----ANEILSIPIWYGMKNEE 353 (373)
T ss_dssp CCSSEEEEES---SHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHH----HHHEEEECCCTTCCHHH
T ss_pred eeEEEEEEeC---CHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHH----HhCEEEccCCCCCCHHH
Confidence 1123344443 366788888888999987653222333322110 111111111 12579999999888888
Q ss_pred HHHHHHHHhcC
Q 021783 295 ISDLDKALRTG 305 (307)
Q Consensus 295 i~~l~~~l~~~ 305 (307)
++.+.+++++.
T Consensus 354 i~~~~~~l~~~ 364 (373)
T 3frk_A 354 IEYVIDKINAW 364 (373)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHH
Confidence 88888888765
No 102
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.94 E-value=1.5e-25 Score=198.64 Aligned_cols=251 Identities=15% Similarity=0.104 Sum_probs=171.8
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcC-CCceEEEEe-CCCCCccccccHH---HHHH
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIG-PWTKLVWVE-SPTNPRQQICDIR---KIAE 84 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~-~~~~~v~~~-~~~n~tG~~~~~~---~l~~ 84 (307)
||+|++++|+|+++. ..++..|++++.+|.+ |+++++++++ +++++|+++ +++||||.+++.+ +|++
T Consensus 133 gd~V~v~~p~y~~~~----~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~ 208 (427)
T 3ppl_A 133 TVKWICPVPGYDRHF----SITERFGFEMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSA 208 (427)
T ss_dssp CCEEEEEESCCHHHH----HHHHHTTCEEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred CCEEEEcCCCcHHHH----HHHHHcCCEEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHH
Confidence 999999999999887 5667789999999874 8999999995 789999876 8999999999866 8888
Q ss_pred HH-HHcCCEEEEeCccCCCCcC-------Cc-------cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 85 MA-HAHGALLLVDNSIMSPVLS-------RP-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 85 ~~-~~~~~~li~D~a~~~~~~~-------~~-------~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
+| ++||+++|+|++|+...+. +. ...+.+++++||||++ + +|+|+||+++++ .+.+.+....
T Consensus 209 ~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~-~G~r~G~~~~~~-~l~~~~~~~~ 285 (427)
T 3ppl_A 209 METAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKIT-L-AGAGVSFFLTSA-ENRKWYTGHA 285 (427)
T ss_dssp CCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTS-C-TTSSCEEEECCH-HHHHHHHHHH
T ss_pred HHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhcc-C-cCccEEEEEcCH-HHHHHHHHHh
Confidence 88 9999999999999853221 11 1447899999999994 4 488999999874 4555565555
Q ss_pred HhcCCCCChhhHHHHhhcccc-------HHHHHHHHHHHHHHHHHHHhcC-CCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 150 NAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
.......+...+..+...++. +....+.+.++.+.+.+.|.+. +.+ +++... . ...+.
T Consensus 286 ~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~-----------~~~~~~--~-p~~g~ 351 (427)
T 3ppl_A 286 GIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEY-----------GVAQWT--V-PAGGY 351 (427)
T ss_dssp HHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG-----------TCCEEC--C-CSBSS
T ss_pred hcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----------CceEEe--C-CCccE
Confidence 555555555555555555443 1222233333444444444431 100 000000 0 12367
Q ss_pred eEEEEeCCHHHHHHHHhcCCcceeecCCCCc-cceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc---CChHHHHHH
Q 021783 222 VLSFLTGSLALSKHVVETTKYFSITVSFGSV-KSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISD 297 (307)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~ 297 (307)
++++.+++.+ ...+.+.+.++||.+++|+. |... .+..++++|||++. +++++.++.
T Consensus 352 ~~~~~~~~~~-~~~~~~~l~~~gv~v~~~g~~~~~~------------------~~~~~~~~Ris~~~~~~~~i~~~~~~ 412 (427)
T 3ppl_A 352 FISLDVVPGT-ASRVAELAKEAGIALTGAGSSYPLR------------------QDPENKNLRLAPSLPPVEELEVAMDG 412 (427)
T ss_dssp CEEEECSTTC-HHHHHHHHHHTTEECCCTTTTSGGG------------------CCTTSCEEEECCSSSCHHHHHHHHHH
T ss_pred EEEEECCcch-HHHHHHHHHHCCCEEecCcCcCCCC------------------CCCCCCeEEEECCCCCHHHHHHHHHH
Confidence 7888886543 67778888889999998543 2210 01246789999986 567778888
Q ss_pred HHHHHhc
Q 021783 298 LDKALRT 304 (307)
Q Consensus 298 l~~~l~~ 304 (307)
|.+++++
T Consensus 413 l~~~l~~ 419 (427)
T 3ppl_A 413 VATCVLL 419 (427)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877754
No 103
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.94 E-value=1.7e-25 Score=193.63 Aligned_cols=253 Identities=11% Similarity=0.099 Sum_probs=172.3
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCcccc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQI 76 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 76 (307)
|+ .++.++.++ +.+++..+.| +. .+...++..|++++.++.+ |+++++ +++++++|++++++||||.+
T Consensus 73 al~~~~~~l~~~-~~i~~~~~~~-~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~ 146 (362)
T 3ffr_A 73 IWERIIQNCVEK-KSFHCVNGSF-SK--RFYEFAGELGREAYKEEAAFGKGFYPADIT--VPADAEIICLTHNETSSGVS 146 (362)
T ss_dssp HHHHHHHHHCSS-EEEEEECSHH-HH--HHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CCTTCCEEEEESEETTTTEE
T ss_pred HHHHHHHhccCC-cEEEEcCcHH-HH--HHHHHHHHhCCCeEEEecCCCCCCCHHHHh--ccCCccEEEEEcCCCCccee
Confidence 45 455567777 4444554444 42 2224567789999999864 788887 77899999999999999999
Q ss_pred ccHHHHHHHHHHc-CCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh---
Q 021783 77 CDIRKIAEMAHAH-GALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--- 151 (307)
Q Consensus 77 ~~~~~l~~~~~~~-~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~--- 151 (307)
+|+++|.++|++| |+++|+|++|+.+..+ +... +|++++|+||++++++| +|+++++++.. +.+......
T Consensus 147 ~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~--~d~~~~s~~K~~~~~~G--~g~~~~~~~~~-~~~~~~~~gg~~ 221 (362)
T 3ffr_A 147 MPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWTK--IDSVFFSVQKCFGLPAG--LGVWILNDRVI-EKSKALLAKRKS 221 (362)
T ss_dssp CCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTTS--CSEEEEETTSTTCCCSC--CEEEEEEHHHH-HHHHHHHHTTCC
T ss_pred CCHHHHHHHHHhCCCCEEEEecccccCCcccChhH--CcEEEEecccccCCCCc--eEEEEECHHHH-HHhhhccccCCC
Confidence 9999999999999 9999999999987755 3322 89999999999976888 78888886543 333332220
Q ss_pred -----------------c-CCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc
Q 021783 152 -----------------E-GSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 208 (307)
Q Consensus 152 -----------------~-~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 208 (307)
. ..+.+.........+++ .++...++..++++.+.+.|++.+++. +..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~------ 294 (362)
T 3ffr_A 222 IGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFS-FGVED------ 294 (362)
T ss_dssp CCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEE-ESSSC------
T ss_pred CcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCce-eccCC------
Confidence 0 12223233333333332 234556667777888888887765331 11100
Q ss_pred hHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 209 HELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
.....+.+++|.+++ ...++.+.|..+||.++.|..+ ..++++|+|++.
T Consensus 295 ------~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~g~~~-----------------------~~~~~iRis~~~ 343 (362)
T 3ffr_A 295 ------AKLRSMTTIVANTTM--LPGEINKILEPFDMAVGAGYGS-----------------------KKETQIRIANFP 343 (362)
T ss_dssp ------GGGBCSSEEEEEESS--CHHHHHHHHGGGTEEEEECSGG-----------------------GTTTEEEEECCT
T ss_pred ------hhhcCCceEEEecCC--CHHHHHHHHHHCCeEEecCccc-----------------------cCCCEEEEECCC
Confidence 001235678888876 4788899998889988876431 125679999997
Q ss_pred CChHHHHHHHHHHHhc
Q 021783 289 EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 ~~~~~~i~~l~~~l~~ 304 (307)
...++.++.+.++|++
T Consensus 344 ~~~~e~i~~l~~~l~~ 359 (362)
T 3ffr_A 344 AHSLEQVHKLVQTLKE 359 (362)
T ss_dssp TSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 6666777777666654
No 104
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.93 E-value=1e-26 Score=201.52 Aligned_cols=258 Identities=14% Similarity=0.154 Sum_probs=171.8
Q ss_pred HH-HHHHHhcCCCCeEEEcC-CCCcchHHHHhhhcccCCcEEEEecC-----CChHHHHhhcCC--CceEEEEeCCCCCc
Q 021783 3 AL-AAVTHLLGTGEEIVAGD-DLYGGTDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAIGP--WTKLVWVESPTNPR 73 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~-~~~~~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~--~~~~v~~~~~~n~t 73 (307)
|+ .++.+++++||+|++.+ +.|++.. ...++..|++++.++. .|++++++++++ ++++|++++++|||
T Consensus 68 a~~~~~~~~~~~gd~vi~~~~~~~~~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~npt 144 (366)
T 1m32_A 68 AVEAVLGSALGPQDKVLIVSNGAYGARM---VEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTT 144 (366)
T ss_dssp HHHHHHHHSCCTTCCEEEEESSHHHHHH---HHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTT
T ss_pred HHHHHHHHhcCCCCeEEEEeCCCccHHH---HHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCc
Confidence 44 45556778999988765 5565422 2445667889988886 388999999873 68899999999999
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH-----
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF----- 147 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~----- 147 (307)
|.+.|+++|.++|++||+++|+|++|+.+..+ +...++.|++++|+||+++++.| .|+++++++.. +.+..
T Consensus 145 G~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~~~~~~g--~G~~~~~~~~~-~~~~~~~~~~ 221 (366)
T 1m32_A 145 GMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPG--FAFVIAREQKL-AACKGHSRSL 221 (366)
T ss_dssp TEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSS--EEEEEEEHHHH-TTCTTCCSCS
T ss_pred ceecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcccccCCCc--eEEEEECHHHH-HhhcCCCCCc
Confidence 99999999999999999999999999977654 44456799999999999877777 69999986533 21110
Q ss_pred -------HH---Hh-c--CCCCChhhHHHHhhccccH------HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc
Q 021783 148 -------LQ---NA-E--GSGLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 208 (307)
Q Consensus 148 -------~~---~~-~--~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 208 (307)
.. .. . ..+.+.........+++.+ ....++..++.+.+.+.|++. ++ .
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~--------~---- 288 (366)
T 1m32_A 222 SLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GF--------N---- 288 (366)
T ss_dssp TTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TC--------C----
T ss_pred cccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CC--------e----
Confidence 00 00 0 1233333333344444332 334455566666677666653 11 0
Q ss_pred hHHHhhhccCCCceEEEEeCC--HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe
Q 021783 209 HELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 286 (307)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 286 (307)
+..+.....+.++++.+++ ......+.+.|..+||.++.|..+ .++++|+++
T Consensus 289 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~------------------------~~~~iRi~~ 342 (366)
T 1m32_A 289 --TLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVS------------------------QSDCFRIGN 342 (366)
T ss_dssp --BSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHTTEECEECCCS------------------------SSCEEEEEC
T ss_pred --eccCchhcCceEEEEEcCccCCCCHHHHHHHHHHCCEEEECCcCC------------------------CCCEEEEec
Confidence 0000001124578888763 223677888888889988776542 145799999
Q ss_pred cc----CChHHHHHHHHHHHhcC
Q 021783 287 GI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 287 ~~----~~~~~~i~~l~~~l~~~ 305 (307)
+. ++++++++.|.++++++
T Consensus 343 ~~~~~~~~i~~~~~~l~~~~~~~ 365 (366)
T 1m32_A 343 IGEVYAADITALLTAIRTAMYWT 365 (366)
T ss_dssp CSSCCHHHHHHHHHHHHHHCTTC
T ss_pred CCCCCHHHHHHHHHHHHHHHHhc
Confidence 85 45666666666666543
No 105
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.93 E-value=1.2e-25 Score=199.54 Aligned_cols=259 Identities=14% Similarity=0.113 Sum_probs=169.0
Q ss_pred cHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCC---------cEEEEecCCChHHHHhhc--CCCceEEEEeCCC
Q 021783 2 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG---------VVVKRVNTCDLDEVASAI--GPWTKLVWVESPT 70 (307)
Q Consensus 2 aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g---------~~~~~v~~~d~~~l~~~l--~~~~~~v~~~~~~ 70 (307)
+++.++.+++++||+|++++|+|+++...+.. ....| .+++.++.++.+.+...+ .++++++++++|+
T Consensus 130 ~al~~l~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~ 208 (432)
T 3ei9_A 130 CDISRLQVMFGSNVTIAVQDPSYPAYVDSSVI-MGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCSPN 208 (432)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCTHHHHHHHH-HTCSCCEETTTTEETTCEEEECCGGGTTSCCGGGCCCCSEEEEESSC
T ss_pred HHHHHHHHHcCCCCEEEEeCCCCHHHHHHHHH-cCCcccccccccccCceEEeccCcccCCcCChhhCCCCCEEEEeCCC
Confidence 35555677889999999999999888744322 22222 356666664322221112 3678999999999
Q ss_pred CCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC----Cc----cCCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 71 NPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 71 n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~----~~----~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
||||.+++ +++|+++|++||+++|+|++|+..... .. ...+.+++++|+||++ |.+|+|+|+++++++
T Consensus 209 NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~r~G~~~~~~~ 287 (432)
T 3ei9_A 209 NPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYA-GFTGVRLGWTVIPKK 287 (432)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHH-CTTTTCCEEEECCTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhcc-CCcccceEEEEEChH
Confidence 99999986 777888899999999999999833211 11 1235789999999999 678999999999877
Q ss_pred h-------HHHHHHHHHHhcCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCC
Q 021783 140 R-------LAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 207 (307)
Q Consensus 140 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~ 207 (307)
. +.+.+...........+...+..+...+. .+....+.+.++.+.+.+.|++. ++. +..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~------- 358 (432)
T 3ei9_A 288 LLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYD-VYG------- 358 (432)
T ss_dssp CBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-EEE-------
T ss_pred HhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-Cce-ecC-------
Confidence 5 14445544444444455555555555443 23444555666777777777654 211 100
Q ss_pred chHHHhhhccCCCceEEEEeCCHHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe
Q 021783 208 GHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 286 (307)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 286 (307)
...+.++++.+++.+ ..++.+.+. ..||.+++|..|.. .+++++|||+
T Consensus 359 ---------~~~~~~~~~~~~~~~-~~~~~~~ll~~~gv~v~~g~~f~~---------------------~~~~~iRis~ 407 (432)
T 3ei9_A 359 ---------GKNAPYVWVHFPNQS-SWDVFAEILEKTHVVTTPGSGFGP---------------------GGEGFVRVSA 407 (432)
T ss_dssp ---------CSSSSEEEEECTTSC-HHHHHHHHHHHHCEECEEGGGGCG---------------------GGTTEEEEEC
T ss_pred ---------CCcceEEEEECCCCC-HHHHHHHHHHHCCEEEeCchHhCC---------------------CCCCEEEEEe
Confidence 113567788887443 555666554 45999988876431 1257899999
Q ss_pred cc--CChHHHHHHHHHHH
Q 021783 287 GI--EDVNDLISDLDKAL 302 (307)
Q Consensus 287 ~~--~~~~~~i~~l~~~l 302 (307)
.. +++++.+++|++.-
T Consensus 408 ~~~~e~l~~~l~rl~~~~ 425 (432)
T 3ei9_A 408 FGHRENILEACRRFKQLY 425 (432)
T ss_dssp CSCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHh
Confidence 64 56666666666543
No 106
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.93 E-value=6.3e-25 Score=193.43 Aligned_cols=257 Identities=18% Similarity=0.126 Sum_probs=172.2
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----------------ChHHHHhhcCCCceEEEEeC
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----------------DLDEVASAIGPWTKLVWVES 68 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----------------d~~~l~~~l~~~~~~v~~~~ 68 (307)
.++..++++||+|+++.|+|.++. ..++..|++++.++.+ |++++++++++++++|++++
T Consensus 100 ~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~ 175 (410)
T 3e2y_A 100 NSIQGLVDPGDEVIIMVPFYDCYE----PMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNT 175 (410)
T ss_dssp HHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEES
T ss_pred HHHHHhcCCCCEEEEeCCCchhhH----HHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeC
Confidence 455567899999999999999887 5567789999888764 88999999998999999999
Q ss_pred CCCCccccc---cHHHHHHHHHHcCCEEEEeCccCCCCcC-----Cc----cCCCccEEEeccccccccCCCceeEEEEE
Q 021783 69 PTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS-----RP----LELGADIVMHSATKFIAGHSDVMAGVLAV 136 (307)
Q Consensus 69 ~~n~tG~~~---~~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~----~~~~~d~~~~s~~K~~~g~~g~~~G~~~~ 136 (307)
|+||||.++ ++++|+++|++||+++|+|++|+..... .. ...+.++++.|+||.+ |++|+|+|++++
T Consensus 176 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~~ 254 (410)
T 3e2y_A 176 PHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTF-SVTGWKLGWSIG 254 (410)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHS-SCGGGCCEEEEC
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhc-CCCCceEEEEEE
Confidence 999999996 6999999999999999999999742211 11 1235679999999999 667899999998
Q ss_pred cChhHHHHHHHHHHhcCCCCChhhHHHHhhccc-----------cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCC
Q 021783 137 KGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE 205 (307)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~ 205 (307)
+++ +.+.+...........+...+..+...++ .+....+.+.++.+.+.+.|++. ++ .+..+
T Consensus 255 ~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~---- 327 (410)
T 3e2y_A 255 PAH-LIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GL-KPIVP---- 327 (410)
T ss_dssp CHH-HHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TC-EEEBC----
T ss_pred CHH-HHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CC-eecCC----
Confidence 755 44445554444444445544444444332 24445566667777777777765 22 11111
Q ss_pred CCchHHHhhhccCCCceEEEEeCCHH-----------HHHHHHhc-CCcceeecCCCCccceeecccccCCCCCcHHHHH
Q 021783 206 HPGHELHYSQAKGAGSVLSFLTGSLA-----------LSKHVVET-TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 273 (307)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~ 273 (307)
..+.++++.+.... ...++.+. ++++||.+.+|+.|.... +
T Consensus 328 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~----------~----- 380 (410)
T 3e2y_A 328 ------------DGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSK----------S----- 380 (410)
T ss_dssp ------------SBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTT----------T-----
T ss_pred ------------CccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCC----------C-----
Confidence 13455566553210 12344443 456799998887643100 0
Q ss_pred hcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 274 ARGLTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 274 ~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
....++++|||++. .++.++...+.|+
T Consensus 381 -~~~~~~~iRis~~~--~~e~l~~~l~~l~ 407 (410)
T 3e2y_A 381 -KPHFEKLVRFCFIK--KDSTLDAAEEIFR 407 (410)
T ss_dssp -HHHHTTEEEEECCC--CHHHHHHHHHHHH
T ss_pred -CCCCCCEEEEEEcC--CHHHHHHHHHHHH
Confidence 00125789999987 3333444444443
No 107
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.93 E-value=5.5e-26 Score=197.79 Aligned_cols=276 Identities=17% Similarity=0.205 Sum_probs=182.2
Q ss_pred HH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccc
Q 021783 3 AL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 3 al-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~ 75 (307)
|+ .++.++ +++||+|+++.++|+++. ..++..|++++.++.+ |++++++.+++++++|+ ++||||.
T Consensus 65 a~~~~~~~~~~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~ 137 (374)
T 3uwc_A 65 ALAMSFKMLNIGAGDEVITCANTFIASV----GAIVQAGATPVLVDSENGYVIDPEKIEAAITDKTKAIM---PVHYTGN 137 (374)
T ss_dssp HHHHHHHHTTCCTTCEEEEESSSCHHHH----HHHHHTTCEEEEECBCTTSSBCGGGTGGGCCTTEEEEC---CBCGGGC
T ss_pred HHHHHHHHcCCCCCCEEEECCCccHHHH----HHHHHcCCEEEEEecCCCCCcCHHHHHHhCCCCceEEE---EeCCcCC
Confidence 44 455667 899999999999999887 5567789999999986 89999999998888887 8899999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccCCCCcCCccCCC--ccEEEeccc--cccccCCCceeEEEEEcChhHHHHHHHHHHh
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNA 151 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~d~~~~s~~--K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~ 151 (307)
..++++|.++|++||+++|+|++|+.+........+ .|+++.|+| |++++++. +|+++++++.+.+.+......
T Consensus 138 ~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K~l~~~g~--~g~~~~~~~~~~~~~~~~~~~ 215 (374)
T 3uwc_A 138 IADMPALAKIAKKHNLHIVEDACQTILGRINDKFVGSWGQFACFSLHPLKNLNVWSD--AGVIITHSDEYAEKLRLYRNH 215 (374)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECSSSSSSCCSSC--CEEEEESCHHHHHHHHHHTBT
T ss_pred cCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeeccccccEEEEeCCCCCcCCccce--eEEEEeCCHHHHHHHHHHHhc
Confidence 999999999999999999999999987644333333 699999987 99954233 899998877676655544321
Q ss_pred c------------CCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 152 E------------GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 152 ~------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
. ........+.+....++.++...++..++.+.+.+.++..+.. +..+..... ....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~~~---------~~~~ 284 (374)
T 3uwc_A 216 GLINRDVCVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEF--IDVPVRREG---------VYHV 284 (374)
T ss_dssp TEEETTEESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTT--EECCCCCTT---------EECC
T ss_pred CccccCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCe--EEeccCCCC---------Ccee
Confidence 1 1123445555555556666666667777777777777765420 111111000 0001
Q ss_pred CceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccC----CCCCcHHHHHhcCCCCCeEEEEecc----CCh
Q 021783 220 GSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS----HASIPVEVRQARGLTEDLVRISVGI----EDV 291 (307)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~----~~~~~~~~~~~~~~~~~~iRis~~~----~~~ 291 (307)
...+.+... +...+.+.|..+||.++.+...+..+.|.... ...++.... ..++.+|++++. +|+
T Consensus 285 ~~~~~~~~~---~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lrl~~~~~~t~edi 357 (374)
T 3uwc_A 285 FHIYVLRVK---YRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEK----HGEAVITLPAHPYLTEEEI 357 (374)
T ss_dssp CSSEEEEET---THHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHH----HHHHEEEECCCTTSCHHHH
T ss_pred eEEEEEEcC---CHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHH----HHhCEEEccCCCCCCHHHH
Confidence 122333333 36678888888899998876322222222110 011111110 113679999975 667
Q ss_pred HHHHHHHHHHHhcC
Q 021783 292 NDLISDLDKALRTG 305 (307)
Q Consensus 292 ~~~i~~l~~~l~~~ 305 (307)
+++++.|.+++++.
T Consensus 358 ~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 358 NYIIKKVREFYLEK 371 (374)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhh
Confidence 77777777766543
No 108
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.93 E-value=1.4e-25 Score=193.42 Aligned_cols=253 Identities=14% Similarity=0.113 Sum_probs=172.6
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-----CChHHHHhhcCC-CceEEEEeCCCCCccccccH
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAIGP-WTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~~ 79 (307)
++.++++ |+|++++++|+++ .+...++..|++++.++. .|++++++.+++ ++++|++++++||||.+.|+
T Consensus 68 ~~~~~~~--d~vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~ 143 (353)
T 2yrr_A 68 GLANLDR--GPVLVLVNGAFSQ--RVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPA 143 (353)
T ss_dssp HHHTCSC--CCEEEEECSHHHH--HHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCH
T ss_pred HHHHhcC--CcEEEEcCCCchH--HHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCH
Confidence 3334555 8999999999876 333556778999999986 378999999986 89999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH------------
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY------------ 146 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~------------ 146 (307)
++|.++|++||+++|+|++|+.+..+ +...++.|++++|+||++++++| +|+++++++.. +.+.
T Consensus 144 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~-~~l~~~~~~~~~~~~~ 220 (353)
T 2yrr_A 144 EAIGALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSAPPG--LAPIAASLEAR-KAFTGKRGWYLDLARV 220 (353)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCCCSS--CEEEEECHHHH-HHCCCCSCSTTCHHHH
T ss_pred HHHHHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccccCCCc--eEEEEECHHHH-HHhccCCCccccHHHH
Confidence 99999999999999999999876654 34445789999999998878778 79999986644 2221
Q ss_pred -HHH--HhcCCCCChhhHHHHhhcccc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 147 -FLQ--NAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 147 -~~~--~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
... .....+.+.........+++. +....++..++.+.+.+.|++. ++ .+..+ ...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~--------------~~~ 284 (353)
T 2yrr_A 221 AEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GF-RPYPK--------------ASP 284 (353)
T ss_dssp HHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC-EESCS--------------SSB
T ss_pred hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CC-ccccC--------------ccC
Confidence 101 111122333333333333332 3334555566666777777654 22 11100 011
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec----cCChH-H
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVN-D 293 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~-~ 293 (307)
.+.+++|.++......++.+.|..+||.++.|..+. .++++|+|++ .++++ +
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~-----------------------~~~~iRi~~~~~~~~~~~~~~ 341 (353)
T 2yrr_A 285 LPTVLVVRPPEGVDADRLVRALYAEGVAVAGGIGPT-----------------------RGQVLRLGLMGEGARREAYQA 341 (353)
T ss_dssp CTTEEEEECCTTCCHHHHHHHHHHTTEECEECCGGG-----------------------TTTCEEEECSGGGSCHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHCCEEEeCCcccc-----------------------CCCeEEEecCccCCHHHHHHH
Confidence 355667887532236778888888899888776421 2456999993 25666 7
Q ss_pred HHHHHHHHHhc
Q 021783 294 LISDLDKALRT 304 (307)
Q Consensus 294 ~i~~l~~~l~~ 304 (307)
+++.|.++++.
T Consensus 342 ~~~~l~~~l~~ 352 (353)
T 2yrr_A 342 FLKALDRALAL 352 (353)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 78888777653
No 109
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.93 E-value=7.5e-26 Score=195.26 Aligned_cols=250 Identities=14% Similarity=0.129 Sum_probs=175.2
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-CChHHHHhhcCCCceEEEEeCCCCCccccccHHH
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
|+.++...+. ||+|+++.|+|.++. ..++..|++++.++. ++.+.+.. +++++|++++|+||||.+++.++
T Consensus 79 al~~~~~~l~-gd~Vi~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~~---~~~~~v~i~~p~nptG~~~~~~~ 150 (350)
T 3fkd_A 79 AFYQIAQAFR-GSRSLIAIPSFAEYE----DACRMYEHEVCFYPSNEDIGEADF---SNMDFCWLCNPNNPDGRLLQRTE 150 (350)
T ss_dssp HHHHHHHHTT-TCEEEEEESCCHHHH----HHHHHTTCEEEEEETTSCGGGSCC---TTCSEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHHHHHC-CCEEEEeCCCcHHHH----HHHHHcCCeEEEEecCCccccCcc---CCCCEEEEeCCCCCcCCCCCHHH
Confidence 4533333333 999999999998887 667778999999998 54343321 68999999999999999999999
Q ss_pred HHHHHHHcC-CEEEEeCccCCCCcC------CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCC
Q 021783 82 IAEMAHAHG-ALLLVDNSIMSPVLS------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 154 (307)
Q Consensus 82 l~~~~~~~~-~~li~D~a~~~~~~~------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~ 154 (307)
+.++++.++ .++|+|++|+..... .....+.+++++|+||++ +.+|+|+|+++++ +.+.+.+..... ..
T Consensus 151 l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~-~~~~~~~~~~~~--~~ 226 (350)
T 3fkd_A 151 ILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAY-GIPGLRIGYIVAN-KDFMKRVAAFST--PW 226 (350)
T ss_dssp HHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHH-SCGGGCCEEEECC-HHHHHHHHTTCC--TT
T ss_pred HHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhc-cCcchheEeEEeC-HHHHHHHHHhCC--CC
Confidence 999999886 799999999743321 222446789999999999 6678899999995 445444433321 22
Q ss_pred CCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHH
Q 021783 155 GLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 231 (307)
Q Consensus 155 ~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (307)
..+...+..+...++. +..+.++..++.+.+.+.|++.+.+. + . +..++++++.++..
T Consensus 227 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~----------------~~~~~~~~~~~~~~- 287 (350)
T 3fkd_A 227 AVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVE-V-H----------------PSGTTFFLLRLKKG- 287 (350)
T ss_dssp CSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEE-E-C----------------CCSSSEEEEEESSS-
T ss_pred CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-E-C----------------CCCCcEEEEECCCC-
Confidence 3444555544444332 22333444577778888887664331 1 1 11366777888654
Q ss_pred HHHHHHhcCCc-ceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhc
Q 021783 232 LSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRT 304 (307)
Q Consensus 232 ~~~~~~~~l~~-~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~ 304 (307)
...++.+.|.. +||.+++|..|. +..++++|||++. ++++++++.|++.+++
T Consensus 288 ~~~~l~~~L~~~~gi~v~~g~~f~---------------------~~~~~~iRis~~~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 288 TAAELKKYMLEEYNMLIRDASNFR---------------------GLDESYVRITTQRPAQNQLFIKALETFLEK 341 (350)
T ss_dssp CHHHHHHHHHHTTCEECEECTTST---------------------TCCTTEEEEECCCHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHCCEEEEeCccCC---------------------CCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 47788888887 899999887632 1236789999986 5677888888887764
No 110
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.93 E-value=6e-27 Score=209.75 Aligned_cols=268 Identities=10% Similarity=0.066 Sum_probs=172.4
Q ss_pred HH-HHHHHhcCCCCe---EEEcCCCCcchHHHHhhhcccCCcEE-----EEecCC-----ChHHHHhhcC---CCceEEE
Q 021783 3 AL-AAVTHLLGTGEE---IVAGDDLYGGTDRLLSRVTPKTGVVV-----KRVNTC-----DLDEVASAIG---PWTKLVW 65 (307)
Q Consensus 3 al-~~~~~~~~~gd~---Vlv~~~~~~~~~~~~~~~~~~~g~~~-----~~v~~~-----d~~~l~~~l~---~~~~~v~ 65 (307)
++ .++.++++|||+ |+++.++|++....+...++..|+++ ...+.+ |+++++++++ +++++|+
T Consensus 140 al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~ 219 (465)
T 3e9k_A 140 NLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVIL 219 (465)
T ss_dssp HHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEE
T ss_pred HHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeEEEE
Confidence 45 344556666655 99999999998877777778888774 233432 7999999996 6899999
Q ss_pred EeCCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccc-cCCCceeEEEEEcChhHHH
Q 021783 66 VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA-GHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 66 ~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~-g~~g~~~G~~~~~~~~~~~ 143 (307)
+++++||||.+.|+++|.++|++||+++|+|++|+.|..+ +...+++|++++|+||+++ ||.| .|+++++++....
T Consensus 220 ~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~gp~~--~g~l~~~~~~~~~ 297 (465)
T 3e9k_A 220 FSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFACWCSYKYLNAGAGG--IAGAFIHEKHAHT 297 (465)
T ss_dssp EESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEEEECSSSTTCCCTTC--CCEEEECGGGTTT
T ss_pred EeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEEEECcccccccCCCc--eEEEEEcHHHHhh
Confidence 9999999999999999999999999999999999998876 5566789999999999994 6655 7888888654321
Q ss_pred HHHHH---------HHh---------------cCCCCChhhHHHHhhccccH-----HHHHHHHHHHHHHHHHHHhcCCC
Q 021783 144 ELYFL---------QNA---------------EGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPR 194 (307)
Q Consensus 144 ~~~~~---------~~~---------------~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~l~~~~~ 194 (307)
..... ... ..++.+........++++.+ +...++..++.+.+.+.+++...
T Consensus 298 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 377 (465)
T 3e9k_A 298 IKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYG 377 (465)
T ss_dssp SCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 11000 000 01123333333333444332 23334444555555555554200
Q ss_pred ccEEecCCCCCCCchHHHhh-hccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHH
Q 021783 195 VKKVNYAGLPEHPGHELHYS-QAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 273 (307)
Q Consensus 195 ~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~ 273 (307)
.++.+...+++++..+ .+...+++++|.++ .....+.+.|..+||.++.+
T Consensus 378 ----~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~--~~~~~l~~~L~~~Gi~v~~~----------------------- 428 (465)
T 3e9k_A 378 ----KDKAATKKPVVNIITPSHVEERGCQLTITFS--VPNKDVFQELEKRGVVCDKR----------------------- 428 (465)
T ss_dssp -------------CEEECSCSSGGGBCSCEEEEEC--CTTCCHHHHHHTTTEECEEE-----------------------
T ss_pred ----ccccccCCCCeEEeCCCCHhhcccEEEEEec--CCHHHHHHHHHHCCEEEecC-----------------------
Confidence 0011111122222221 12335788888886 22456667777778876521
Q ss_pred hcCCCCCeEEEEe-cc----CChHHHHHHHHHHHhcC
Q 021783 274 ARGLTEDLVRISV-GI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 274 ~~~~~~~~iRis~-~~----~~~~~~i~~l~~~l~~~ 305 (307)
.++++|+|+ +. ++++++++.|++++++.
T Consensus 429 ----~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 429 ----NPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp ----TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred ----CCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 145699998 43 67777777777777653
No 111
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.93 E-value=8.6e-26 Score=197.77 Aligned_cols=236 Identities=15% Similarity=0.056 Sum_probs=163.5
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMA 86 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~~~~l~~~~ 86 (307)
+||+|++++++|+++. ..++..|++++.+|.+ |++++++.+++ +++++++++|+||||.+.|+++|.++|
T Consensus 122 ~gd~vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~ 197 (397)
T 3f9t_A 122 EHPKIIVPITAHFSFE----KGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIA 197 (397)
T ss_dssp SSCEEEEETTCCTHHH----HHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHH
T ss_pred CCeEEEECCcchhHHH----HHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHH
Confidence 4999999999999887 5566679999999986 89999999987 899999999999999999999999999
Q ss_pred HHcCCEEEEeCccCCCCcC---------------CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh
Q 021783 87 HAHGALLLVDNSIMSPVLS---------------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 151 (307)
Q Consensus 87 ~~~~~~li~D~a~~~~~~~---------------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~ 151 (307)
++||+++|+|++|+.+..+ +... ++|+++.|+||+++++. ++|+++++++.+.+.+......
T Consensus 198 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~--~~g~~~~~~~~~~~~~~~~~~~ 274 (397)
T 3f9t_A 198 KENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCPI--PSGGILFKDIGYKRYLDVDAPY 274 (397)
T ss_dssp HHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCCS--SCEEEEESSGGGGGGTCEECTT
T ss_pred HHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccCCCC--CceEEEEeCHHHHHhhccCCcc
Confidence 9999999999999754321 2233 78999999999985544 4888888877554332211111
Q ss_pred c---------CCCC--ChhhHHHHhhcc--ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 152 E---------GSGL--APFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 152 ~---------~~~~--~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
. +... ....++.+...+ ..+....++..++.+.+.+.|++. ++.. .. ..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~----------------~~ 336 (397)
T 3f9t_A 275 LTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKP-VI----------------EP 336 (397)
T ss_dssp SSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCB-SS----------------CC
T ss_pred ccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEE-Ec----------------CC
Confidence 1 1111 122333333222 233445566667777777777755 2110 00 11
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHH
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDL 294 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~ 294 (307)
.+++++|.+.+ ...+.+.|.++||.++.|.. ++++|++++. ++++++
T Consensus 337 ~~~~~~~~~~~---~~~~~~~l~~~gi~v~~~~~--------------------------~~~~Ri~~~~~~~~e~i~~~ 387 (397)
T 3f9t_A 337 ILNIVAIEDED---YKEVCKKLRDRGIYVSVCNC--------------------------VKALRIVVMPHIKREHIDNF 387 (397)
T ss_dssp SSSEEEEECTT---HHHHHHHHHHTTCBCEECSS--------------------------SSEEEEECCTTCCHHHHHHH
T ss_pred CccEEEEEeCC---HHHHHHHHHhCCeEEeccCC--------------------------CCEEEEEEcCCCCHHHHHHH
Confidence 36777887764 45677777777887776543 4579999985 455555
Q ss_pred HHHHHHHH
Q 021783 295 ISDLDKAL 302 (307)
Q Consensus 295 i~~l~~~l 302 (307)
++.|.+++
T Consensus 388 ~~~l~~~l 395 (397)
T 3f9t_A 388 IEILNSIK 395 (397)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhh
Confidence 55555544
No 112
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.93 E-value=6.2e-25 Score=191.13 Aligned_cols=275 Identities=14% Similarity=0.099 Sum_probs=189.2
Q ss_pred HH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhc-CCC--ceEEEEeCCCC
Q 021783 3 AL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAI-GPW--TKLVWVESPTN 71 (307)
Q Consensus 3 al-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l-~~~--~~~v~~~~~~n 71 (307)
|+ .++.++ ++|||+|++++++|+++. ..+...|+++++++.+ |++++++++ +++ |++|+ ++|
T Consensus 65 al~~al~~l~~~~Gd~Vi~~~~~~~~~~----~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~ 137 (377)
T 3ju7_A 65 GLMAAIQLKKRKKGKYALMPSFTFPATP----LAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVV---PYA 137 (377)
T ss_dssp HHHHHHHHHSCTTCCEEEEESSSCTHHH----HHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBC
T ss_pred HHHHHHHHcCCCCcCEEEECCCCcHHHH----HHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEE---EEC
Confidence 44 455566 899999999999999888 5566789999999864 899999988 556 89887 678
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccCCCCcCCccCC---CccEEEecc--ccccccCCCceeEEEEEcChhHHHHHH
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLEL---GADIVMHSA--TKFIAGHSDVMAGVLAVKGERLAKELY 146 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~---~~d~~~~s~--~K~~~g~~g~~~G~~~~~~~~~~~~~~ 146 (307)
|+|...|+++|.++|+ ||+++|+|++|+.|........ ..|+.+.|| +|++++ + .+|+++++++.+.+.+.
T Consensus 138 ~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~-g--~gG~~~~~~~~l~~~~~ 213 (377)
T 3ju7_A 138 TFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGI-G--EGGLIYSKNEEDIQRIK 213 (377)
T ss_dssp GGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCC-B--SCEEEEESCHHHHHHHH
T ss_pred CCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCC-C--CcEEEEECCHHHHHHHH
Confidence 8999999999999999 9999999999998765433233 256666665 699964 3 38999998887777666
Q ss_pred HHHHhc------------CCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhh
Q 021783 147 FLQNAE------------GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 147 ~~~~~~------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 214 (307)
...... ...++...+++....++.+..+.++..++++.+.+.|+..+.+.....+.-..
T Consensus 214 ~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~--------- 284 (377)
T 3ju7_A 214 RMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTE--------- 284 (377)
T ss_dssp HHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCS---------
T ss_pred HHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCC---------
Confidence 554422 24566777888888888888888999999999999998765321000010000
Q ss_pred hccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCC--CCCcHHHHHhcCCCCCeEEEEeccCChH
Q 021783 215 QAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH--ASIPVEVRQARGLTEDLVRISVGIEDVN 292 (307)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~iRis~~~~~~~ 292 (307)
.....++.+.+++....+.+.+.|..+||.++.+........|....+ ..++...... ++.+|++++..-.+
T Consensus 285 --~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----~~~l~lp~~~~~t~ 358 (377)
T 3ju7_A 285 --AVIQQFMPILCPEEVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIA----KRIVSLPLWEGMTK 358 (377)
T ss_dssp --CBCCSSEEEECCTTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHH----HHEEEECCCTTCCH
T ss_pred --cceEEEEEEEeCChhhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHH----hCEEECCCCCCCCH
Confidence 001223455555433478899999999999988763222223322221 2233332222 35699999875555
Q ss_pred HHHHHHHHHHh
Q 021783 293 DLISDLDKALR 303 (307)
Q Consensus 293 ~~i~~l~~~l~ 303 (307)
+.++.+.+.|+
T Consensus 359 ~di~~v~~~l~ 369 (377)
T 3ju7_A 359 EIVEQIVICLG 369 (377)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 55555555554
No 113
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.93 E-value=5.4e-26 Score=199.32 Aligned_cols=258 Identities=14% Similarity=0.144 Sum_probs=175.4
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-----CChHHHHhhcCC-CceEEEEeCCCCCcccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAIGP-WTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~ 78 (307)
.++.+++++||+|++++|+|+++. +...++..|++++.++. .|++++++.+++ ++++|++++++||||.+.|
T Consensus 84 ~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 161 (396)
T 2ch1_A 84 AMLSNLLEEGDRVLIAVNGIWAER--AVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP 161 (396)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC
T ss_pred HHHHHhcCCCCeEEEEcCCcccHH--HHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC
Confidence 455567899999999999998763 22456778999999985 488999999986 8999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH---------
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--------- 148 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~--------- 148 (307)
+++|.++|+++|+++|+|++|+.+..+ +...++.|++++|+||+++++.| .|+++++++.+ +.+...
T Consensus 162 ~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g--~g~~~~~~~~~-~~~~~~~~~~~~~~~ 238 (396)
T 2ch1_A 162 LEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPG--ITPISISPKAL-DVIRNRRTKSKVFYW 238 (396)
T ss_dssp CTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSS--CEEEEECHHHH-HHHHTCSSCCSCGGG
T ss_pred HHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEcCCccccCCCC--eEEEEECHHHH-HhhhhccCcccceEe
Confidence 999999999999999999999976654 45566789999999999878877 69999986433 332110
Q ss_pred -----HH-h--------cCCCCChhhHHHHhhcccc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCch
Q 021783 149 -----QN-A--------EGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH 209 (307)
Q Consensus 149 -----~~-~--------~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~ 209 (307)
.. . ...+.+...+..+..+++. +....++..++.+.+.+.|++. ++. + ....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~----~~~~--- 309 (396)
T 2ch1_A 239 DLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLD-I----FVKD--- 309 (396)
T ss_dssp CHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCC-B----SSCS---
T ss_pred chHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCe-e----ccCC---
Confidence 00 0 1112222333333333332 3334555566666677766643 110 0 0000
Q ss_pred HHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe-c
Q 021783 210 ELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-G 287 (307)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~ 287 (307)
.....+.++++.++...+...+.+.|..+ ||.++.|..+ ..++++||++ +
T Consensus 310 -----~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~-----------------------~~~~~iRi~~~~ 361 (396)
T 2ch1_A 310 -----PRHRLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGP-----------------------TFGKAWRVGIMG 361 (396)
T ss_dssp -----GGGBCTTEEEEECCTTCCHHHHHHHHHHHHCBCCBCCCGG-----------------------GTTTEEEEECCG
T ss_pred -----ccccCCceEEEEcCCCCCHHHHHHHHHHhCCEEEecCccc-----------------------cCCCEEEEECCC
Confidence 00012347788875322367788887654 9988876531 0256799999 5
Q ss_pred c----CChHHHHHHHHHHHhc
Q 021783 288 I----EDVNDLISDLDKALRT 304 (307)
Q Consensus 288 ~----~~~~~~i~~l~~~l~~ 304 (307)
. ++++++++.|.+++++
T Consensus 362 ~~~~~e~i~~~~~~l~~~l~~ 382 (396)
T 2ch1_A 362 ECSTVQKIQFYLYGFKESLKA 382 (396)
T ss_dssp GGCSHHHHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHH
Confidence 2 5688888888888764
No 114
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.93 E-value=4.1e-25 Score=192.23 Aligned_cols=258 Identities=18% Similarity=0.192 Sum_probs=167.7
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceE-EEEeCCCCCcc-ccccHHHHH
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKL-VWVESPTNPRQ-QICDIRKIA 83 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~-v~~~~~~n~tG-~~~~~~~l~ 83 (307)
++.++ |||+|++++|+|+++...+. .++..|++++.+ .|++++++. ++++++ |++++|+|||| ...++++|.
T Consensus 92 ~~~~~--~gd~Vl~~~~~y~~~~~~~~-~~~~~g~~~~~v--~d~~~l~~~-~~~~~~~v~~~~p~nptG~~~~~l~~i~ 165 (374)
T 2aeu_A 92 TILAL--KPKKVIHYLPELPGHPSIER-SCKIVNAKYFES--DKVGEILNK-IDKDTLVIITGSTMDLKVIELENFKKVI 165 (374)
T ss_dssp HHHHH--CCSEEEEECSSSSCCTHHHH-HHHHTTCEEEEE--SCHHHHHTT-CCTTEEEEEECBCTTSCBCCHHHHHHHH
T ss_pred HHHhC--CCCEEEEecCCCCccHHHHH-HHHHcCcEEEEe--CCHHHHHhc-CCCccEEEEEccCCCCCCCCcccHHHHH
Confidence 34444 99999999999887665443 567789999988 689999998 888999 99999999999 888999999
Q ss_pred HHHHHcCCEEEEeCccCCCCc----C-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCCh
Q 021783 84 EMAHAHGALLLVDNSIMSPVL----S-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 158 (307)
Q Consensus 84 ~~~~~~~~~li~D~a~~~~~~----~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (307)
++|++||+++|+|++|+.+.. . .+..++.|++++|+||+++|+ ++|+++++++ +.+.+.......+...++
T Consensus 166 ~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~---~~G~~~~~~~-~~~~l~~~~~~~~~~~~~ 241 (374)
T 2aeu_A 166 NTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGP---RGGLLAGKKE-LVDKIYIEGTKFGLEAQP 241 (374)
T ss_dssp HHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSC---SCEEEEEEHH-HHHHHHHHHHTTTCBCCH
T ss_pred HHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCc---ceEEEEECHH-HHHHHHHhhccccCCCCH
Confidence 999999999999999975431 1 134457899999999998653 4899998854 555555544444445566
Q ss_pred hhHHHHhhccccHHH-HHHHHHHHHHHH----HHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE-eCCHH-
Q 021783 159 FDCWICLRGVKTMAL-RVEKQQDNAQKI----AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-TGSLA- 231 (307)
Q Consensus 159 ~~~~~~~~~l~~~~~-~~~~~~~~~~~l----~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 231 (307)
..++.+..+++.+.. +++++.++.+.+ .+.+++. .+.+...+++... +...+.++.+. .....
T Consensus 242 ~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------L~~~~~~~g~~~~---~~~~g~~~~~~~~~~~~~ 311 (374)
T 2aeu_A 242 PLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKE-------LKAIDDNINIVYE---RTPTGFVIKRVYKDDTIN 311 (374)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH-------HTTTCTTEEEEEE---ECSSEEEEEEEESSHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHh-------hhhhhhccCccee---eCCceEEEEeeccccccc
Confidence 666666666554322 455555555555 3444321 0001000111110 01123444442 22111
Q ss_pred --HHHHHH-hcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-----CChHHHHHHHHHHHh
Q 021783 232 --LSKHVV-ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-----EDVNDLISDLDKALR 303 (307)
Q Consensus 232 --~~~~~~-~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-----~~~~~~i~~l~~~l~ 303 (307)
...++. +.+.++||.+.+|..+. ..++++||+++. .+++++.+.|.++++
T Consensus 312 ~~~~~~~~~~ll~~~gV~v~~g~~~~----------------------~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~ 369 (374)
T 2aeu_A 312 IKKLIEIGFNLLKNYGIITITVAGMP----------------------GASKSLRIDLTSRDAERIDDNYIIKAIVESIK 369 (374)
T ss_dssp HHHHHHHHHHHHHHHCEECSTTSSSC----------------------SSCCSEEEETTSGGGGGSCHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHhCCEEEecCCCCC----------------------CCCCeEEEEcCCchHHHHHHHHHHHHHHHHHH
Confidence 111243 34456799998875421 124579999974 246777777777776
Q ss_pred cC
Q 021783 304 TG 305 (307)
Q Consensus 304 ~~ 305 (307)
++
T Consensus 370 ~~ 371 (374)
T 2aeu_A 370 MA 371 (374)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 115
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.93 E-value=1.1e-24 Score=189.19 Aligned_cols=273 Identities=16% Similarity=0.128 Sum_probs=189.2
Q ss_pred HH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.++ +++||+|+++.++|+++. ..++..|++++.++.+ |++++++++++++++|+ ++||+|
T Consensus 62 al~~al~~~~~~~gd~Vi~~~~~~~~~~----~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~~~~G 134 (367)
T 3nyt_A 62 ALQIVQMALGVGPGDEVITPGFTYVATA----ETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAII---PVSLYG 134 (367)
T ss_dssp HHHHHHHHTTCCTTCEEEEESSSCTHHH----HHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCTTEEEEC---CBCGGG
T ss_pred HHHHHHHHhCCCCcCEEEECCCccHHHH----HHHHHcCCEEEEEecCCccCCcCHHHHHHhcCcCCcEEE---eeCCcc
Confidence 44 455566 799999999999999888 5566789999999874 88999999999999888 788999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccCCCCcCCccCCCc--cEEEecc--ccccccCCCceeEEEEEcChhHHHHHHHHHH
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGA--DIVMHSA--TKFIAGHSDVMAGVLAVKGERLAKELYFLQN 150 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--d~~~~s~--~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~ 150 (307)
...++++|.++|+++|+++|+|++|+.|........+. |++++|| +|+++ +.|. +|+++.+++.+.+.+.....
T Consensus 135 ~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~K~l~-~~g~-gg~~~~~~~~l~~~~~~~~~ 212 (367)
T 3nyt_A 135 QCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSAPLG-CYGD-GGAIFTNDDELATAIRQIAR 212 (367)
T ss_dssp CCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTSSSSEEEEECCTTSSSC-CSSC-CEEEEESCHHHHHHHHHHTB
T ss_pred ChhhHHHHHHHHHHcCCEEEEECccccCCeECCeeccCCCCEEEEECCCCCcCC-CcCc-eeEEEeCCHHHHHHHHHHHh
Confidence 99999999999999999999999999776543333333 9999997 89995 4343 89999987777666655433
Q ss_pred h------------cCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 151 A------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 151 ~------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
. .....+...+......++.++...++..++.+.+.+.|+... + ..+.... ....
T Consensus 213 ~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~-~---~~~~~~~---------~~~~ 279 (367)
T 3nyt_A 213 HGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLSLKQVG-I---GTPFIEV---------NNIS 279 (367)
T ss_dssp TTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTT-C---CCCCCCT---------TEEC
T ss_pred cCCCcCceeeccCcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-e---eccCCCC---------CCce
Confidence 2 123455666777777777777667777777788888887652 1 0111000 0011
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeeccccc-CCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHH
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM-SHASIPVEVRQARGLTEDLVRISVGIEDVNDLISD 297 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~ 297 (307)
...++.+.++ +.+.+.+.|..+||.++.+........|... ....++...... ++.+|++++....++.++.
T Consensus 280 ~~~~~~~~~~---~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~lp~~~~~t~~~i~~ 352 (367)
T 3nyt_A 280 VYAQYTVRMD---NRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAA----TQVMSLPMHPYLDTASIKI 352 (367)
T ss_dssp CCSSEEEECS---SHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHH----HHEEEECCCTTCCHHHHHH
T ss_pred eeEEEEEEeC---CHHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHH----hCeEEccCCCCCCHHHHHH
Confidence 1234455555 3667888888899988876542222223221 122232222222 3569999998778888888
Q ss_pred HHHHHhc
Q 021783 298 LDKALRT 304 (307)
Q Consensus 298 l~~~l~~ 304 (307)
+.+.+++
T Consensus 353 v~~~~~~ 359 (367)
T 3nyt_A 353 ICAALTN 359 (367)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 8887765
No 116
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.93 E-value=3.5e-25 Score=200.93 Aligned_cols=125 Identities=19% Similarity=0.258 Sum_probs=105.8
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC---------ChHHHHhhcCCCceEEEEeCCCCCccccccHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---------DLDEVASAIGPWTKLVWVESPTNPRQQICDIR 80 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~ 80 (307)
++++||+|++++|+|.++. ..++..|++++.++.+ |++++++++++++++|++++|+||||.+++.+
T Consensus 189 l~~~gd~Viv~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~ 264 (533)
T 3f6t_A 189 LLKKGDKIAINEPIFTPYL----RIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTN 264 (533)
T ss_dssp SSCTTCEEEEESSCCHHHH----TSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHH
T ss_pred ccCCcCEEEEcCCCcHHHH----HHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccccCHH
Confidence 6899999999999998887 7778889999888863 78999999999999999999999999998755
Q ss_pred ---HHHHHHH-HcCCEEEEeCccCCCCcC--Cc--cCCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 81 ---KIAEMAH-AHGALLLVDNSIMSPVLS--RP--LELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 81 ---~l~~~~~-~~~~~li~D~a~~~~~~~--~~--~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
+|+++|+ +||+++|+|++|+..... .. ...+.+++++|+||.+ |++|+|+|+++++++
T Consensus 265 ~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~l~~~~~ 330 (533)
T 3f6t_A 265 ALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLF-GCTGWRLGVIALNEK 330 (533)
T ss_dssp HHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHH-TCGGGCEEEEEEESS
T ss_pred HHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccC-CCcccceEEEEECcH
Confidence 8888888 689999999999743221 11 1225779999999999 678999999999876
No 117
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.93 E-value=1.8e-24 Score=190.01 Aligned_cols=246 Identities=14% Similarity=0.100 Sum_probs=165.4
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcC----CCceEEEEeCCCCCccccccHHHHHHHHH
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKIAEMAH 87 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~~~~l~~~~~ 87 (307)
++||+|+++.++|+++.. .++..|++++.++.+|++++++.++ +++++|++++++||||.+.|+++|.++|+
T Consensus 130 ~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~v~~~d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~ 205 (401)
T 2bwn_A 130 FPGLIIYSDSLNHASMIE----GIKRNAGPKRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAE 205 (401)
T ss_dssp STTCEEEEETTCCHHHHH----HHHHSCCCEEEECTTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHH
T ss_pred CCCCEEEECchhhHHHHH----HHHHcCCeEEEEcCCCHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHH
Confidence 689999999999998884 4456899999999999999988886 58999999999999999999999999999
Q ss_pred HcCCEEEEeCccCCCCcC-Cc----c--C--CCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH-Hh-cCCCC
Q 021783 88 AHGALLLVDNSIMSPVLS-RP----L--E--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NA-EGSGL 156 (307)
Q Consensus 88 ~~~~~li~D~a~~~~~~~-~~----~--~--~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~-~~-~~~~~ 156 (307)
+||+++|+|++|+.+.+. .. . . .+.|++++|+||++++ + +|+++++++ +.+.+.... .. .....
T Consensus 206 ~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~-~---GG~~~~~~~-~~~~l~~~~~~~~~~~~~ 280 (401)
T 2bwn_A 206 EFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGV-F---GGYIAASAR-MVDAVRSYAPGFIFSTSL 280 (401)
T ss_dssp HHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCS-C---CEEEEECHH-HHHHHHHHCHHHHTSBCC
T ss_pred HcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccC-C---CCEEecCHH-HHHHHHHhCcCceecCCC
Confidence 999999999999965431 11 0 1 1358999999999954 4 488888744 444443321 11 11222
Q ss_pred ChhhHHHHhhccccH-----HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHH
Q 021783 157 APFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 231 (307)
Q Consensus 157 ~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (307)
++..+..+..+++.+ ....++..++.+.+.+.|++. ++ .-. ...++++++.+++..
T Consensus 281 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~--------~~~----------~~~~~~~~~~~~~~~ 341 (401)
T 2bwn_A 281 PPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GM--------PII----------DHGSHIVPVVIGDPV 341 (401)
T ss_dssp CHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TC--------CBC----------CCSSSCEEEECCCHH
T ss_pred CHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CC--------ccc----------CCCCCeEEEEeCChH
Confidence 333443333443322 344555566666777766643 11 000 012458888887644
Q ss_pred HHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 232 LSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 232 ~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
....+.+.|. .+||.++++..+.. ..+++++|+|++. ++++++++.|.++++++
T Consensus 342 ~~~~~~~~L~~~~gi~v~~~~~~~~--------------------~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 342 HTKAVSDMLLSDYGVYVQPINFPTV--------------------PRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp HHHHHHHHHHHHHCEECCEECTTTS--------------------CTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHhcCCEEEeecCCCCC--------------------CCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence 5778888884 78998876543110 0123579999985 55666666666665543
No 118
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.93 E-value=1.6e-24 Score=190.34 Aligned_cols=275 Identities=18% Similarity=0.191 Sum_probs=175.2
Q ss_pred HH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.++ +++||+|++++++|+++. ..++..|++++.++.+ |++++++.+++++++|+ ++||||
T Consensus 90 a~~~~l~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG 162 (399)
T 2oga_A 90 ALQLALRGLGIGPGDEVIVPSHTYIASW----LAVSATGATPVPVEPHEDHPTLDPLLVEKAITPRTRALL---PVHLYG 162 (399)
T ss_dssp HHHHHHHHTTCCTTCEEEEESSSCTHHH----HHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTTEEEEC---CBCGGG
T ss_pred HHHHHHHHhCCCCcCEEEECCCccHHHH----HHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCCCeEEE---EeCCcC
Confidence 44 455566 789999999999999877 4556789999998853 78999999998888887 568999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccCCCCcCCccCCC--ccEEEecc--ccccccCCCceeEEEEEcChhHHHHHHHHHH
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSA--TKFIAGHSDVMAGVLAVKGERLAKELYFLQN 150 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~d~~~~s~--~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~ 150 (307)
...++++|.++|+++|+++|+|++|+.+...+....+ .|++++|+ +|++ +++| ++|+++++++.+.+.+.....
T Consensus 163 ~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~~~sK~~-~~~G-~~g~~~~~~~~~~~~l~~~~~ 240 (399)
T 2oga_A 163 HPADMDALRELADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGKNL-GCFG-DGGAVVTGDPELAERLRMLRN 240 (399)
T ss_dssp CCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEETTCTTCEEEEECCTTSSS-CCSS-CCEEEEESCHHHHHHHHHHHB
T ss_pred CccCHHHHHHHHHHcCCEEEEECcccccCccCCeecccccCEEEEeCCCCccC-CcCC-ceEEEEeCCHHHHHHHHHHHh
Confidence 9999999999999999999999999877533333333 69999999 6999 5556 799999876666555554433
Q ss_pred hc----------C--CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 151 AE----------G--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 151 ~~----------~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
.. + ...+...++.+..+++.+....+...++.+.+.+.|++.+++. .+. . +..+
T Consensus 241 ~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~---~~~---~--------~~~~ 306 (399)
T 2oga_A 241 YGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYLSGLAGLPGIG---LPV---T--------APDT 306 (399)
T ss_dssp TTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCTTCB---CCC---C--------CTTE
T ss_pred cCccccccccccccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcc---ccC---C--------CCCC
Confidence 21 1 1345566666666666665555555666666666665443221 010 0 0000
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccC----CCCCcHHHHHhcCCCCCeEEEEecc----CC
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS----HASIPVEVRQARGLTEDLVRISVGI----ED 290 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~----~~~~~~~~~~~~~~~~~~iRis~~~----~~ 290 (307)
.+.++.+.+... ....+.+.|..+||.++.+........|.... ...++.... ..++++||+++. ++
T Consensus 307 ~~~~~~~~~~~~-~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~lRi~~~~~~t~ed 381 (399)
T 2oga_A 307 DPVWHLFTVRTE-RRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAES----FARQVLSLPIGPHLERPQ 381 (399)
T ss_dssp ECCCSSEEEECS-SHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHH----HHHHEEEECCSTTCCHHH
T ss_pred cceeEEEEEECC-CHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHH----HHhCEEEccCCCCCCHHH
Confidence 111112333222 35677788878899887643211110010000 000000000 012579999974 67
Q ss_pred hHHHHHHHHHHHhcC
Q 021783 291 VNDLISDLDKALRTG 305 (307)
Q Consensus 291 ~~~~i~~l~~~l~~~ 305 (307)
++++++.|+++++++
T Consensus 382 i~~~~~~l~~~~~~l 396 (399)
T 2oga_A 382 ALRVIDAVREWAERV 396 (399)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHh
Confidence 777777777776654
No 119
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.93 E-value=1.2e-24 Score=192.45 Aligned_cols=251 Identities=14% Similarity=0.113 Sum_probs=168.8
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhc--CCCceEEEEe-CCCCCccccccHH---HHH
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAI--GPWTKLVWVE-SPTNPRQQICDIR---KIA 83 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l--~~~~~~v~~~-~~~n~tG~~~~~~---~l~ 83 (307)
||+|+++.|+|..+. ..++..|++++.++.+ |++++++++ .+++++|++. +++||||.+++.+ +|+
T Consensus 124 gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~ 199 (423)
T 3ez1_A 124 TPKMIVTVPGYDRHF----LLLQTLGFELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLA 199 (423)
T ss_dssp CCEEEEEESCCHHHH----HHHHHHTCEEEEEEEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHH
T ss_pred CCEEEEcCCCcHHHH----HHHHHcCCEEEeccCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHH
Confidence 599999999998887 5567789999998874 899999999 5789999865 8999999999865 888
Q ss_pred HHH-HHcCCEEEEeCccCCCCcC--------Cc-------cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH
Q 021783 84 EMA-HAHGALLLVDNSIMSPVLS--------RP-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 147 (307)
Q Consensus 84 ~~~-~~~~~~li~D~a~~~~~~~--------~~-------~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~ 147 (307)
++| ++||+++|+|++|+...+. .. ...+.+++++|+||++ + +|+|+|+++.+++ +.+.+..
T Consensus 200 ~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~-~G~r~G~~~~~~~-~~~~~~~ 276 (423)
T 3ez1_A 200 GLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKIT-F-AGAGLGFVASSED-NIRWLSK 276 (423)
T ss_dssp TCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTS-C-SSSSCEEEEECHH-HHHHHHH
T ss_pred HHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhc-c-CCcceEEEEeCHH-HHHHHHH
Confidence 888 8999999999999842211 11 2446889999999984 3 4889999999854 5555655
Q ss_pred HHHhcCCCCChhhHHHHhhcccc--------HHHHHHHHHHHHHHHHHHHhcC-CCcc-EEecCCCCCCCchHHHhhhcc
Q 021783 148 LQNAEGSGLAPFDCWICLRGVKT--------MALRVEKQQDNAQKIAEFLASH-PRVK-KVNYAGLPEHPGHELHYSQAK 217 (307)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~l~~~l~~~-~~~~-~~~~~~l~~~~~~~~~~~~~~ 217 (307)
.........+...+..+...++. +....+.+.++.+.+.+.+.+. +.+. .+... . .
T Consensus 277 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~-------------~-p 342 (423)
T 3ez1_A 277 YLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWT-------------L-P 342 (423)
T ss_dssp HHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEEC-------------C-C
T ss_pred HHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEe-------------C-C
Confidence 55555545555555444433332 1122223333444444444331 1110 00000 0 1
Q ss_pred CCCceEEEEeCCHHHHHHHHhcCCcceeecCC-CCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc---CChHH
Q 021783 218 GAGSVLSFLTGSLALSKHVVETTKYFSITVSF-GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVND 293 (307)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~-g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~ 293 (307)
..+.++++.+++. ....+.+.+.++||.+++ |..|..- .+..++++|||++. +++++
T Consensus 343 ~~g~~~~~~~~~~-~~~~~~~~l~~~gv~v~~~g~~~~~~------------------~~~~~~~iRis~~~~~~~~i~~ 403 (423)
T 3ez1_A 343 KGGYFISLDTAEP-VADRVVKLAEAAGVSLTPAGATYPAG------------------QDPHNRNLRLAPTRPPVEEVRT 403 (423)
T ss_dssp SBSSCEEEEESSS-CHHHHHHHHHHTTEECCCTTTTSSTT------------------CCSSSCEEEECCSSSCHHHHHH
T ss_pred CccEEEEEECCCC-cHHHHHHHHHHCCcEEecCcccccCC------------------CCCCCCeEEEEcCCCCHHHHHH
Confidence 2466788888654 367778888889999998 5442210 01236789999985 67778
Q ss_pred HHHHHHHHHhc
Q 021783 294 LISDLDKALRT 304 (307)
Q Consensus 294 ~i~~l~~~l~~ 304 (307)
.++.|.+++++
T Consensus 404 ~~~~l~~~l~~ 414 (423)
T 3ez1_A 404 AMQVVAACIRL 414 (423)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888887754
No 120
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.93 E-value=1.3e-24 Score=193.48 Aligned_cols=270 Identities=14% Similarity=0.091 Sum_probs=173.4
Q ss_pred HH-HHHHHhcCCCC--------------eEEEc-CCCCcchHHHHh--hhcccCCcEEEEecC----------CChHHHH
Q 021783 3 AL-AAVTHLLGTGE--------------EIVAG-DDLYGGTDRLLS--RVTPKTGVVVKRVNT----------CDLDEVA 54 (307)
Q Consensus 3 al-~~~~~~~~~gd--------------~Vlv~-~~~~~~~~~~~~--~~~~~~g~~~~~v~~----------~d~~~l~ 54 (307)
|+ .++.+++++|| +|+++ +|+|+.+..... ......|..++.++. .|+++++
T Consensus 118 al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~ 197 (444)
T 3if2_A 118 AFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALE 197 (444)
T ss_dssp HHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHH
T ss_pred HHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHH
Confidence 44 44556778888 78876 899987762110 034567888887773 3899999
Q ss_pred hh---cCCCceEEEEeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----C-CccCCCccEEEeccccc
Q 021783 55 SA---IGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----S-RPLELGADIVMHSATKF 122 (307)
Q Consensus 55 ~~---l~~~~~~v~~~~~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~-~~~~~~~d~~~~s~~K~ 122 (307)
++ +.+++++|++++|+||||.+++ +++|+++|++||+++|+|++|+.+.. . .....+.+++++|+||+
T Consensus 198 ~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 277 (444)
T 3if2_A 198 NLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI 277 (444)
T ss_dssp TCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT
T ss_pred HHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhc
Confidence 98 6789999999999999999998 88999999999999999999984321 1 12234789999999996
Q ss_pred cccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhcccc--HH----H-HHHHHHHHHHHHHHHHhcC-CC
Q 021783 123 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT--MA----L-RVEKQQDNAQKIAEFLASH-PR 194 (307)
Q Consensus 123 ~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~----~-~~~~~~~~~~~l~~~l~~~-~~ 194 (307)
+.+|+++|+++.+++ +.+.+.......+...+...+..+...++. +. . ..+.+.++.+.+.+.+++. +.
T Consensus 278 --~~~G~r~G~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 354 (444)
T 3if2_A 278 --GLPGMRTGIIVADAK-VIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGD 354 (444)
T ss_dssp --TCGGGCCEEEECCHH-HHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSS
T ss_pred --cCCCCceEEEEECHH-HHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 457899999998744 555555544443333333334433333321 11 1 1223344555555555542 21
Q ss_pred cc-EEecCCCCCCCchHHHhhhccCCCceEEEEeCC-HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHH
Q 021783 195 VK-KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVR 272 (307)
Q Consensus 195 ~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~ 272 (307)
+. .+.. ...+.++++.++. ......+.+.|.++||.+++|..|..-... . .
T Consensus 355 ~~~~~~~----------------~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~----~-~------ 407 (444)
T 3if2_A 355 YPLMIHK----------------PEGAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDV----S-D------ 407 (444)
T ss_dssp SSEEEEC----------------CCBSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCC----T-T------
T ss_pred CCceEec----------------CCccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCC----c-c------
Confidence 10 1100 1235677777764 223677888888899999988764311000 0 0
Q ss_pred HhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 021783 273 QARGLTEDLVRISVGI--EDVNDLISDLDKALRT 304 (307)
Q Consensus 273 ~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 304 (307)
....++++|||++. +++++.++.|.+++++
T Consensus 408 --~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~ 439 (444)
T 3if2_A 408 --YQHAHECIRMSIAADEQTLIDGIKVIGEVVRE 439 (444)
T ss_dssp --CSGGGSEEEEESSSCHHHHHHHHHHHHHHHHH
T ss_pred --cccCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 00024689999986 5677777777777654
No 121
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.92 E-value=6.1e-25 Score=193.02 Aligned_cols=259 Identities=16% Similarity=0.159 Sum_probs=162.2
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcE-EEEecCCChHHHHhhcC--CCceEEEEeCCCCCcccccc-
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV-VKRVNTCDLDEVASAIG--PWTKLVWVESPTNPRQQICD- 78 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~-~~~v~~~d~~~l~~~l~--~~~~~v~~~~~~n~tG~~~~- 78 (307)
++.++..++++||+|++++|+|+++. ..++..|++ ++.+|.++.+.+...+. +++++|++++|+||||.+++
T Consensus 107 al~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~nptG~~~~~ 182 (400)
T 3asa_A 107 DLFRLLSFFGPNQTVAIQDPSYPAYL----DIARLTGAKEIIALPCLQENAFFPEFPEDTHIDILCLCSPNNPTGTVLNK 182 (400)
T ss_dssp HHHHHHHHHCSSCEEEEEESCCHHHH----HHHHHTTCSEEEEEECCGGGTTCCCCCTTCCCSEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHcCCCCEEEECCCCcHHHH----HHHHHcCCcceEecccchhcCcccChhhccCccEEEEeCCCCCCCCcCCH
Confidence 45455566789999999999998877 455667888 88888752111111121 57899999999999999987
Q ss_pred --HHHHHHHHHHcCCEEEEeCccCC----CCc-CCccCC----CccEEEeccccccccCCCceeEEEEEcChh-------
Q 021783 79 --IRKIAEMAHAHGALLLVDNSIMS----PVL-SRPLEL----GADIVMHSATKFIAGHSDVMAGVLAVKGER------- 140 (307)
Q Consensus 79 --~~~l~~~~~~~~~~li~D~a~~~----~~~-~~~~~~----~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~------- 140 (307)
+++|+++|+++|+++|+|++|+. +.. .....+ +.+++++|+||++ |.+|+|+|+++++++.
T Consensus 183 ~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~GlriG~~~~~~~~~~~~~~~ 261 (400)
T 3asa_A 183 DQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPL-GFAGIRLGWTVIPQELTYADGHF 261 (400)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGG-TTTTCCCEEEECCTTCBCTTSCB
T ss_pred HHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhc-CCcchheeEEeeChhhccchhhh
Confidence 67889999999999999999973 211 122222 3569999999999 6679999999998765
Q ss_pred HHHHHHHHHHhcCCCCChhhHHHHhhccc--cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 141 LAKELYFLQNAEGSGLAPFDCWICLRGVK--TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+.............+.+...+..+...++ .++...+.+.++.+.+.+.|++. ++ .+.. ..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~----------------~~ 323 (400)
T 3asa_A 262 VIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT-GF-EVFG----------------GE 323 (400)
T ss_dssp HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT-TC-EEEE----------------CS
T ss_pred HHHHHHHHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC-CC-eeeC----------------CC
Confidence 33333222222222334443433333332 22333455566667777777654 22 1111 11
Q ss_pred CCceEEEE-eCCHHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec--cCChHHH
Q 021783 219 AGSVLSFL-TGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--IEDVNDL 294 (307)
Q Consensus 219 ~~~~~~~~-~~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--~~~~~~~ 294 (307)
.+.++++. ++...+..++.+.+. ..||.+++|..|... .++++|||+. .+++++.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~~g~~f~~~---------------------~~~~iRis~~~~~e~i~~~ 382 (400)
T 3asa_A 324 HAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIGFGRS---------------------GSGFVRFSSLGKREDILAA 382 (400)
T ss_dssp SSSEEEEECCCTTCCTTTHHHHHHHHHSEECEEGGGGCGG---------------------GTTCEEEECCSCHHHHHHH
T ss_pred CceEEEEeccCCCCCHHHHHHHHHHhCCEEEeChhHhCCC---------------------CCCEEEEEeeCCHHHHHHH
Confidence 35677887 643222345555554 459998887753210 2467999953 2677777
Q ss_pred HHHHHHHHhcC
Q 021783 295 ISDLDKALRTG 305 (307)
Q Consensus 295 i~~l~~~l~~~ 305 (307)
++.|.+++++.
T Consensus 383 l~~l~~~~~~~ 393 (400)
T 3asa_A 383 CERLQMAPALQ 393 (400)
T ss_dssp HHHHHC-----
T ss_pred HHHHHHHHHhh
Confidence 77777776543
No 122
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.92 E-value=3.2e-24 Score=189.31 Aligned_cols=267 Identities=13% Similarity=0.113 Sum_probs=169.1
Q ss_pred HH-HHHHHhcCCCC-----eEEEc-CCCCcchHHHHhh--hcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEe
Q 021783 3 AL-AAVTHLLGTGE-----EIVAG-DDLYGGTDRLLSR--VTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVE 67 (307)
Q Consensus 3 al-~~~~~~~~~gd-----~Vlv~-~~~~~~~~~~~~~--~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~ 67 (307)
|+ .++..++++|| +|+++ +|+|+.+...... .....+..+..++.+ |+++++ +++++++++++
T Consensus 110 al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~v~~~ 187 (417)
T 3g7q_A 110 AFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IGEETGMICVS 187 (417)
T ss_dssp HHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CCTTEEEEEEE
T ss_pred HHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--cccCceEEEEC
Confidence 45 34556788987 99997 9999877632211 123345566666543 788887 67889999999
Q ss_pred CCCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCc-----C-CccCCCccEEEeccccccccCCCceeEEEEEcC
Q 021783 68 SPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----S-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKG 138 (307)
Q Consensus 68 ~~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~-----~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~ 138 (307)
+|+||||.+++ +++|+++|++||+++|+|++|+.+.. . .+...+.+++++|+|| + +.+|+|+|+++.++
T Consensus 188 ~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~-~~~G~r~G~~~~~~ 265 (417)
T 3g7q_A 188 RPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSK-L-GLPGSRCGIIIAND 265 (417)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGG-G-TCTTSCCEEEECCH
T ss_pred CCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechh-c-cCCCcceEEEEeCH
Confidence 99999999998 89999999999999999999974221 1 2233578999999999 5 56799999998864
Q ss_pred hhHHHHHHHHHHhcCCCCChhhHHHHhhcccc--HHH-----HHHHHHHHHHHHHHHHhcC-CCcc-EEecCCCCCCCch
Q 021783 139 ERLAKELYFLQNAEGSGLAPFDCWICLRGVKT--MAL-----RVEKQQDNAQKIAEFLASH-PRVK-KVNYAGLPEHPGH 209 (307)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~-----~~~~~~~~~~~l~~~l~~~-~~~~-~~~~~~l~~~~~~ 209 (307)
.+.+.+...........+...+..+...++. +.. ..+.+.++.+.+.+.+++. +.+. .+..
T Consensus 266 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--------- 335 (417)
T 3g7q_A 266 -KTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHK--------- 335 (417)
T ss_dssp -HHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEEC---------
T ss_pred -HHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeC---------
Confidence 4555555555544444444444443333321 111 2233445555566666542 2110 1111
Q ss_pred HHHhhhccCCCceEEEEeCC-HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 210 ELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
...+.++++.++. ..+...+.+.+.++||.+++|..|..-... . .+..++++|||++.
T Consensus 336 -------~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~------~--------~~~~~~~iRis~~~ 394 (417)
T 3g7q_A 336 -------PEGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDK------P--------WPHTHQCMRMNYVP 394 (417)
T ss_dssp -------CCBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSS------C--------CGGGGGEEEEESCS
T ss_pred -------CCcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCcc------c--------cccCCCeEEEEecC
Confidence 1235677777764 223677888888889999988764311000 0 00014689999986
Q ss_pred --CChHHHHHHHHHHHhc
Q 021783 289 --EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 --~~~~~~i~~l~~~l~~ 304 (307)
+++++.++.|.+++++
T Consensus 395 ~~~~i~~~~~~l~~~l~~ 412 (417)
T 3g7q_A 395 EPDKIEAGVKILAEEIER 412 (417)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 5677777777777654
No 123
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.92 E-value=4e-24 Score=187.04 Aligned_cols=227 Identities=17% Similarity=0.223 Sum_probs=160.6
Q ss_pred HH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.++ +++||+|+++.++|+++. ..++..|++++.++.+ |++++++.+++++++|+ |+||||
T Consensus 65 al~~~l~~l~~~~gd~Vi~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG 137 (388)
T 1b9h_A 65 ALELALQVMGVGPGTEVIVPAFTFISSS----QAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIM---PVHMAG 137 (388)
T ss_dssp HHHHHHHHTTCCTTCEEEEESSSCTHHH----HHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEEC---CBCGGG
T ss_pred HHHHHHHHcCCCCcCEEEECCCccHHHH----HHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCcc
Confidence 44 455566 789999999999999988 5567789999999863 78999999988888877 899999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccCCCCcC---CccCCCccEEEeccc--cccccCCCceeEEEEEcChhH--HHHHHH
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIMSPVLS---RPLELGADIVMHSAT--KFIAGHSDVMAGVLAVKGERL--AKELYF 147 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~---~~~~~~~d~~~~s~~--K~~~g~~g~~~G~~~~~~~~~--~~~~~~ 147 (307)
.+.++++|.++|++||+++|+|++|+.|... ....++ |+.++||| |+++|+ ++|+++++++.+ .+.+..
T Consensus 138 ~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~-~i~~~S~s~~K~l~g~---~~G~~~~~~~~~~~~~~~~~ 213 (388)
T 1b9h_A 138 LMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELD-SIATFSFQNGKLMTAG---EGGAVVFPDGETEKYETAFL 213 (388)
T ss_dssp CCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGSS-SCEEEECCTTSSSCSS---SCEEEEECTTCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHcCCEEEEecchhcCCccCCeeccccc-ceEEEEccCCCcccCC---CeEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999976643 222333 67777776 666432 589999987645 333332
Q ss_pred HHHhc-------------CC--CCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHH
Q 021783 148 LQNAE-------------GS--GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 212 (307)
Q Consensus 148 ~~~~~-------------~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~ 212 (307)
..... +. .++....+.....++.+....++..++.+.+.+.|++.+++ .+..+. ..
T Consensus 214 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~-~~------- 284 (388)
T 1b9h_A 214 RHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLDEQIAVRDERWTLLSRLLGAIDGV-VPQGGD-VR------- 284 (388)
T ss_dssp HTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTC-EECCCC-TT-------
T ss_pred HHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc-cccCCC-cC-------
Confidence 22110 11 23445555556667777777777888888888888866443 111100 00
Q ss_pred hhhccCCCceEEEEeCCH--HHHHHHHhcCCcceeecCCCC
Q 021783 213 YSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGS 251 (307)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~ 251 (307)
..+..+.++++.+++. .....+.+.|..+||.++.+.
T Consensus 285 --~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~ 323 (388)
T 1b9h_A 285 --ADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAF 323 (388)
T ss_dssp --CCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECC
T ss_pred --CCccceEEEEEEeCCcCcccHHHHHHHHHHCCCCccccc
Confidence 0012356888888653 247788888888899887654
No 124
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.92 E-value=1.2e-23 Score=184.17 Aligned_cols=277 Identities=17% Similarity=0.173 Sum_probs=182.2
Q ss_pred HH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.++ +++||+|++++++|+++. ..++..|++++.++.+ |++++++.+++++++|+ ++||||
T Consensus 83 al~~~l~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~tG 155 (391)
T 3dr4_A 83 ALHLALVAMGIGPGDEVIVPSLTYIASA----NSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKAIM---PVHLYG 155 (391)
T ss_dssp HHHHHHHHHTCCTTCEEEEESSSCTHHH----HHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCTTEEEEC---CBCGGG
T ss_pred HHHHHHHHcCCCCcCEEEECCCchHHHH----HHHHHCCCEEEEEecCccccCcCHHHHHHhcCCCceEEE---EECCCC
Confidence 44 455566 899999999999999988 4566789999999875 88999999998899888 568999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccCCCCcCCccCCC--ccEEEeccc--cccccCCCceeEEEEEcChhHHHHHHHHHH
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQN 150 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~--~d~~~~s~~--K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~ 150 (307)
...|+++|.++|+++|+++|+|++|+.|........+ .|+.+.||+ |++++ . ++|+++.+++.+.+.+.....
T Consensus 156 ~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~l~~-g--~gg~~~~~~~~~~~~~~~~~~ 232 (391)
T 3dr4_A 156 QICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITT-G--EGGMITTNDDDLAAKMRLLRG 232 (391)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSSSCC-B--SCEEEEESCHHHHHHHHHHHB
T ss_pred ChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCCCcCCc-C--CeEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999987654222111 367777755 99854 2 389998887777666655443
Q ss_pred hcC--------------CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhc
Q 021783 151 AEG--------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 216 (307)
Q Consensus 151 ~~~--------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 216 (307)
... .......+.+....++.++...++..++.+.+.+.|++. ++......... ..
T Consensus 233 ~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~----------~~ 301 (391)
T 3dr4_A 233 QGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVAL----------TG 301 (391)
T ss_dssp TTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCT----------TS
T ss_pred cCCCCCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCC----------CC
Confidence 221 223344444444445556666666677777777777755 32111110000 00
Q ss_pred cCCCceEEEEeCC--HHHHHHHHhcCCcceeecCCCCccceeecccccC--CCCCcHHHHHhcCCCCCeEEEEeccCChH
Q 021783 217 KGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFMS--HASIPVEVRQARGLTEDLVRISVGIEDVN 292 (307)
Q Consensus 217 ~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~iRis~~~~~~~ 292 (307)
.....++++.+++ ......+.+.|..+||.++.|... ..+.|.... ...++..... .++.+|++++....+
T Consensus 302 ~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p-~~~~~~~~~~~~~~~~~~~~~----~~~~lrl~~~~~~t~ 376 (391)
T 3dr4_A 302 RHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHP-MHIMPPYAHLATDDLKIAEAC----GVDGLNLPTHAGLTE 376 (391)
T ss_dssp CCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCC-GGGSGGGGGGCCTTCHHHHHH----HHHEEEECCCTTCCH
T ss_pred cceeEEEEEEECCccchhHHHHHHHHHHCCCceeecCCc-cccChhhhhcCcCCChHHHHH----HhCeEEccCCCCCCH
Confidence 1123456777754 233778888888889999876531 122222111 1222222211 135699999887777
Q ss_pred HHHHHHHHHHhcC
Q 021783 293 DLISDLDKALRTG 305 (307)
Q Consensus 293 ~~i~~l~~~l~~~ 305 (307)
+.++.+.++|++.
T Consensus 377 edi~~~~~~l~~~ 389 (391)
T 3dr4_A 377 ADIDRVIAALDQV 389 (391)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH
Confidence 7777777776653
No 125
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.92 E-value=4.3e-24 Score=188.64 Aligned_cols=250 Identities=15% Similarity=0.138 Sum_probs=163.4
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCC----Cce-EEEEeCC-
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGP----WTK-LVWVESP- 69 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~----~~~-~v~~~~~- 69 (307)
|+ .++.++++|||+|++++|+|+++. ..++..|++++.++.+ |++++++.+++ +++ ++++++|
T Consensus 114 al~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~ 189 (418)
T 3rq1_A 114 GIHHLIHNYTEPGDEVLTADWYWGAYR----VICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPG 189 (418)
T ss_dssp HHHHHHHHHSCTTCEEEEESSCCTHHH----HHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSS
T ss_pred HHHHHHHHhcCCCCEEEECCCCchhHH----HHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCC
Confidence 45 455668899999999999998887 5677889999999862 78999988873 566 7888899
Q ss_pred CCCccccccH---HHHHHHHH------HcCCEEEEeCccCCCCcC---------CccCCCc---cEEEeccccccccCCC
Q 021783 70 TNPRQQICDI---RKIAEMAH------AHGALLLVDNSIMSPVLS---------RPLELGA---DIVMHSATKFIAGHSD 128 (307)
Q Consensus 70 ~n~tG~~~~~---~~l~~~~~------~~~~~li~D~a~~~~~~~---------~~~~~~~---d~~~~s~~K~~~g~~g 128 (307)
+||||.+++. ++|+++|+ +||+++|+|++|...... .....+. .++++|+||.+ |.+|
T Consensus 190 ~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G 268 (418)
T 3rq1_A 190 NNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGF-TMYG 268 (418)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTT-TCCS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCC-cCcC
Confidence 9999999985 45556666 899999999999532211 1111112 38899999999 6779
Q ss_pred ceeEEEEE--cChhHHHHHHHHHHh----cCCCCChhhHHHHhhccccH------H----HHHHHHHHHHHHHHHHHhcC
Q 021783 129 VMAGVLAV--KGERLAKELYFLQNA----EGSGLAPFDCWICLRGVKTM------A----LRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 129 ~~~G~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~------~----~~~~~~~~~~~~l~~~l~~~ 192 (307)
+|+|++++ +++.+.+.+...... ..+..+...+..+...++.. . ...+.+.++.+.+.+.+++.
T Consensus 269 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (418)
T 3rq1_A 269 QRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV 348 (418)
T ss_dssp SCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999998 235555555443322 12334445555554444332 1 11233344444555555432
Q ss_pred CCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHH
Q 021783 193 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVR 272 (307)
Q Consensus 193 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~ 272 (307)
+ ++-. . ...+.++++.+. +..++.+.|.++||.+.+|.
T Consensus 349 -g--------~~~~--------~-~~~~~~~~~~~~---~~~~~~~~l~~~gi~v~~g~--------------------- 386 (418)
T 3rq1_A 349 -G--------LPML--------P-YRGGFFITIPTD---SANAICEELKKEHIYVIALA--------------------- 386 (418)
T ss_dssp -T--------CCCC--------C-CCSSSEEEEECT---THHHHHHHHHHTTEECEECS---------------------
T ss_pred -C--------CCCC--------C-CCceEEEEcCCC---CHHHHHHHHHhCCEEEecCC---------------------
Confidence 1 1111 0 112334445554 24566677777899887642
Q ss_pred HhcCCCCCeEEEEecc---CChHHHHHHHHHHHhcCC
Q 021783 273 QARGLTEDLVRISVGI---EDVNDLISDLDKALRTGP 306 (307)
Q Consensus 273 ~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~~~ 306 (307)
+++|||++. +++++.++.|.++++++.
T Consensus 387 -------~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 387 -------NGIRIAACGIPKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp -------SEEEEEGGGSCHHHHTTHHHHHHHHHHHTT
T ss_pred -------CCeEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence 349999873 788889999999887653
No 126
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.92 E-value=8.1e-25 Score=188.52 Aligned_cols=250 Identities=18% Similarity=0.186 Sum_probs=160.8
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC------CceEEEEeCCCCCc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP------WTKLVWVESPTNPR 73 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~------~~~~v~~~~~~n~t 73 (307)
.++.++++|||+|++++|+|.+.+... ..+...|++++.+ .+ |++++++++++ ++++|++++|+|||
T Consensus 68 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt 145 (347)
T 1jg8_A 68 VSIMAHTQRGDEVILEADSHIFWYEVG-AMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRS 145 (347)
T ss_dssp HHHHHHCCTTCEEEEETTCHHHHSSTT-HHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTT
T ss_pred HHHHHhcCCCCEEEEcCcchhhhcccc-chhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEecccccc
Confidence 455667899999999999997654110 1345678998888 42 89999999974 68999999999999
Q ss_pred -ccccc---HHHHHHHHHHcCCEEEEeCccCCCC---cC-Ccc--CCCccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 74 -QQICD---IRKIAEMAHAHGALLLVDNSIMSPV---LS-RPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 74 -G~~~~---~~~l~~~~~~~~~~li~D~a~~~~~---~~-~~~--~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
|.+++ +++|.++|++||+++|+|++|..+. .. ... ..+.|.++.|+||+++++. +|+++.+ +.+.+
T Consensus 146 ~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~---G~~~~~~-~~~~~ 221 (347)
T 1jg8_A 146 GGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPV---GSVVVGD-RDFIE 221 (347)
T ss_dssp TSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSS---CEEEEEC-HHHHH
T ss_pred CCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCc---eEEEEcC-HHHHH
Confidence 99876 5789999999999999999874321 11 111 1357888899999996542 4456655 44444
Q ss_pred HHHHHHHhcCCC--CChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 144 ELYFLQNAEGSG--LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 144 ~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
.+.......+.. .....+.....+++....++++..++.+.+.+.|++. ++. +. .. +..++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~-------------~~--~~~~~ 284 (347)
T 1jg8_A 222 RARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEI-GYS-VN-------------PE--DVKTN 284 (347)
T ss_dssp HHHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHHHH-TCB-CC-------------GG--GCCSS
T ss_pred HHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-Cce-ec-------------cC--CCcce
Confidence 444333333322 2333344433344322222334445666677777643 110 00 00 11366
Q ss_pred eEEEEeCC-HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHH
Q 021783 222 VLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLIS 296 (307)
Q Consensus 222 ~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~ 296 (307)
++++.+++ ..+..++.+.|..+||.++.+. ++++|++++. ++++++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~---------------------------~~~iRl~~~~~~~~e~i~~~~~ 337 (347)
T 1jg8_A 285 MVILRTDNLKVNAHGFIEALRNSGVLANAVS---------------------------DTEIRLVTHKDVSRNDIEEALN 337 (347)
T ss_dssp EEEEECTTSSSCHHHHHHHHHHHTEECEEEE---------------------------TTEEEEECCTTSCHHHHHHHHH
T ss_pred EEEEEcccccCCHHHHHHHHHHCCCEEecCC---------------------------CCeEEEEeCCCCCHHHHHHHHH
Confidence 78888863 2236778888888899776421 3459999963 67777777
Q ss_pred HHHHHHhc
Q 021783 297 DLDKALRT 304 (307)
Q Consensus 297 ~l~~~l~~ 304 (307)
.|.+++++
T Consensus 338 ~l~~~l~~ 345 (347)
T 1jg8_A 338 IFEKLFRK 345 (347)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77777654
No 127
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.92 E-value=5.7e-24 Score=187.59 Aligned_cols=249 Identities=12% Similarity=0.058 Sum_probs=162.0
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCC----Cce-EEEEeCC-
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGP----WTK-LVWVESP- 69 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~----~~~-~v~~~~~- 69 (307)
|+ .++.+++++||+|++++|+|+++. ..++..|++++.++.. |++++++.+++ +++ ++++++|
T Consensus 113 al~~~~~~~~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~ 188 (413)
T 3t18_A 113 AIRSAIFSYLDEGDPLICHDYYWAPYR----KICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPG 188 (413)
T ss_dssp HHHHHHHHHCCSSCEEEEESSCCTHHH----HHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSS
T ss_pred HHHHHHHHhcCCCCEEEECCCCcccHH----HHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCC
Confidence 45 455668899999999999998887 5567789999999862 78999998874 677 7888899
Q ss_pred CCCccccccHH---HHHHHHH------HcCCEEEEeCccCCCCcC---------CccCCCc---cEEEeccccccccCCC
Q 021783 70 TNPRQQICDIR---KIAEMAH------AHGALLLVDNSIMSPVLS---------RPLELGA---DIVMHSATKFIAGHSD 128 (307)
Q Consensus 70 ~n~tG~~~~~~---~l~~~~~------~~~~~li~D~a~~~~~~~---------~~~~~~~---d~~~~s~~K~~~g~~g 128 (307)
+||||.+++.+ +|+++|+ +||+++|+|++|...... .....+. +++++|+||.+ +.+|
T Consensus 189 ~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G 267 (413)
T 3t18_A 189 NNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSH-TAYG 267 (413)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHT-TCGG
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccC-CCcC
Confidence 99999999855 5555665 899999999998522111 1111111 38899999999 6679
Q ss_pred ceeEEEEEc--ChhHHHHHHHHHHh----cCCCCChhhHHHHhhccccH---------HHHHHHHHHHHHHHHHHHhcCC
Q 021783 129 VMAGVLAVK--GERLAKELYFLQNA----EGSGLAPFDCWICLRGVKTM---------ALRVEKQQDNAQKIAEFLASHP 193 (307)
Q Consensus 129 ~~~G~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~l~~~l~~~~ 193 (307)
+|+|++++. ++.+.+.+...... .....+...+..+...++.. ....+.+.++.+.+.+.+++.
T Consensus 268 ~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 346 (413)
T 3t18_A 268 LRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKEN- 346 (413)
T ss_dssp GCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred cCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 999999982 35555555443322 11234455555555555432 112333444555555556543
Q ss_pred CccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHH
Q 021783 194 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 273 (307)
Q Consensus 194 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~ 273 (307)
++ .-. . ...+.++++.+.+ ..++.+.|.++||.+++|
T Consensus 347 g~--------~~~--------~-~~~~~~~~~~~~~---~~~~~~~l~~~gv~v~~g----------------------- 383 (413)
T 3t18_A 347 KL--------TMI--------P-YFGGFFTFIPTDK---AFDIVKDLEKENIFTIPS----------------------- 383 (413)
T ss_dssp TC--------CCB--------C-CCSSSCEEEECSC---HHHHHHHHHHTTEECEEC-----------------------
T ss_pred CC--------Ccc--------C-CCceEEEEeCCCC---HHHHHHHHHhCCEEEecC-----------------------
Confidence 11 100 0 1123344554432 456666777789988764
Q ss_pred hcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 021783 274 ARGLTEDLVRISVGIEDVNDLISDLDKALRTG 305 (307)
Q Consensus 274 ~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 305 (307)
++++|||++..+.+++++.|.++++++
T Consensus 384 -----~~~iRis~~~~~~~~~l~~l~~~l~~~ 410 (413)
T 3t18_A 384 -----AKGIRVAICGVGEEKIPKLVQRLAFYT 410 (413)
T ss_dssp -----SSEEEECTTTSCGGGHHHHHHHHHHHH
T ss_pred -----CCceEEEEeeCCHHHHHHHHHHHHHHH
Confidence 235999998655555589888888653
No 128
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.92 E-value=2e-24 Score=195.67 Aligned_cols=249 Identities=18% Similarity=0.175 Sum_probs=173.6
Q ss_pred HHHHHhcCCC--------CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCC
Q 021783 5 AAVTHLLGTG--------EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTN 71 (307)
Q Consensus 5 ~~~~~~~~~g--------d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n 71 (307)
.++.++.++| |+|+++.++|+++. ..++..|++++.++.+ |+++|++++++++++|++++++|
T Consensus 175 ~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~----~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~n 250 (514)
T 3mad_A 175 LAMKTYRDWARATKGITAPEAVVPVSAHAAFD----KAAQYFGIKLVRTPLDADYRADVAAMREAITPNTVVVAGSAPGY 250 (514)
T ss_dssp HHHHHHHHHHHHHHCCSSCEEEEETTSCTHHH----HHHHHHTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEEEETTCT
T ss_pred HHHHHHHHHhhhhcCCCCCeEEEeCccchHHH----HHHHHcCCeeEEeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCC
Confidence 4444555555 99999999999877 6667789999999976 89999999999999999999999
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccCCCCc-----------C-CccCCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-----------S-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~-----------~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
|||.+.|+++|.++|++||+++|+|++|+.+.. + +....|+|++++|+||+++++.+ +|+++++++
T Consensus 251 ptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~--~g~~~~~~~ 328 (514)
T 3mad_A 251 PHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKG--TSVILYRRP 328 (514)
T ss_dssp TTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSS--CEEEEESSH
T ss_pred CCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCC--eEEEEEeCH
Confidence 999999999999999999999999999985432 1 33456899999999999766665 899999877
Q ss_pred hHHHHHHHHH-Hhc---------CCCCCh---hhHHHHhhcc--ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCC
Q 021783 140 RLAKELYFLQ-NAE---------GSGLAP---FDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLP 204 (307)
Q Consensus 140 ~~~~~~~~~~-~~~---------~~~~~~---~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~ 204 (307)
.......... .+. ..+... ...+.++..+ ..+....++..++++.+.+.|++.+++.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-------- 400 (514)
T 3mad_A 329 DLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLK-------- 400 (514)
T ss_dssp HHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCE--------
T ss_pred HHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeE--------
Confidence 5543211000 000 011111 2233333222 2334556667777778888887654321
Q ss_pred CCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEE
Q 021783 205 EHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRI 284 (307)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRi 284 (307)
+..+ ..++++|...+.+ ..++.+.|..+||.+ .|.. .++++|+
T Consensus 401 ------~~~~----~~~~~~~~~~~~~-~~~l~~~L~~~Gi~v-~g~~-------------------------~~~~~Ri 443 (514)
T 3mad_A 401 ------ILGD----PLWVIAVASDELN-IYQVMEEMAGRGWRL-NGLH-------------------------RPPAFHV 443 (514)
T ss_dssp ------ESSC----CSSEEEEECSSSC-HHHHHHHHHTTTCBC-EEET-------------------------TTTEEEE
T ss_pred ------EeCC----CeEEEEEeCCCCC-HHHHHHHHHhcCCEe-ccCC-------------------------CCCeEEE
Confidence 1100 1347777765443 677888888888866 2211 1345999
Q ss_pred Eec-----cCChHHHHHHHHHHHhc
Q 021783 285 SVG-----IEDVNDLISDLDKALRT 304 (307)
Q Consensus 285 s~~-----~~~~~~~i~~l~~~l~~ 304 (307)
+++ .++++++++.|.+++++
T Consensus 444 ~~~~~~~~~e~i~~~l~~L~~~l~~ 468 (514)
T 3mad_A 444 ALTLRHTEPGVVDRFLADLQDAVAQ 468 (514)
T ss_dssp ECCGGGGSTTHHHHHHHHHHHHHHH
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHH
Confidence 997 26888899998888754
No 129
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.86 E-value=9.2e-27 Score=204.08 Aligned_cols=261 Identities=13% Similarity=0.142 Sum_probs=168.6
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--------CChHHHHhhcC-CCceEEEEeCCCCC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIG-PWTKLVWVESPTNP 72 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--------~d~~~l~~~l~-~~~~~v~~~~~~n~ 72 (307)
|+ .++.+++++||+|+++.|+|+++. ..++..|++++.++. .|++++++.++ ++++++++++|+||
T Consensus 101 a~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~np 176 (392)
T 3b1d_A 101 AISIAIQAFTKEGEAVLINSPVYPPFA----RSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNP 176 (392)
Confidence 44 344556789999999999999887 667788999888876 26788888887 68899999999999
Q ss_pred cccccc---HHHHHHHHHHcCCEEEEeCccCCCCc--------CCccC--CCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 73 RQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL--------SRPLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 73 tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~--------~~~~~--~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
||.+++ +++|.++|++||+++|+|++|+.... ..... .+.+++++|+||++ +.+|+|+|+++++++
T Consensus 177 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~ 255 (392)
T 3b1d_A 177 GGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTF-NIAGTKNSYAIIENP 255 (392)
Confidence 999986 89999999999999999999975321 11112 46789999999999 667889999999765
Q ss_pred hHHHHHHHHHHhcC-CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCC-CCchHHHhhhcc
Q 021783 140 RLAKELYFLQNAEG-SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE-HPGHELHYSQAK 217 (307)
Q Consensus 140 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ 217 (307)
.+.+.+........ ...+...+..+...++...... +++.+.++++. ......++. .|++....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~-------~~~~~~~~~~~---~~l~~~l~~~~~~~~~~~---- 321 (392)
T 3b1d_A 256 TLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWL-------VALKAVLEENI---QFAVEYFAQEAPRLKVMK---- 321 (392)
Confidence 45554444333221 1223334444444443211111 11111111111 111222322 33333321
Q ss_pred CCCceE-EEEeCCH-HHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChH
Q 021783 218 GAGSVL-SFLTGSL-ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVN 292 (307)
Q Consensus 218 ~~~~~~-~~~~~~~-~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~ 292 (307)
..++++ ++.++.. .....+.+.|. ++||.+.+|..|.. ..++++||+++. ++++
T Consensus 322 ~~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~---------------------~~~~~iRi~~~~~~e~i~ 380 (392)
T 3b1d_A 322 PQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGS---------------------EGELHARLNIAAPKSLVE 380 (392)
Confidence 123443 4666532 23667888885 78999988776321 125679999975 6777
Q ss_pred HHHHHHHHHHh
Q 021783 293 DLISDLDKALR 303 (307)
Q Consensus 293 ~~i~~l~~~l~ 303 (307)
+.++.|.++++
T Consensus 381 ~~l~~l~~~l~ 391 (392)
T 3b1d_A 381 EICKRIVCCLP 391 (392)
Confidence 77777777664
No 130
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.92 E-value=5e-25 Score=192.88 Aligned_cols=261 Identities=16% Similarity=0.105 Sum_probs=162.1
Q ss_pred HH-HHHHHhcCCCC----eEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 3 AL-AAVTHLLGTGE----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 3 al-~~~~~~~~~gd----~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
|+ .++.+++++|| +|++++|+|+++. ..++..|++++.++.+ .+.++ .+++++|++++|+||||.++
T Consensus 103 al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~----~~~~~~g~~~~~~~~d-~~~l~---~~~~k~v~l~~p~NPtG~~~ 174 (391)
T 3bwn_A 103 LCQAAVHALSSLARSQPVSVVAAAPFYSTYV----EETTYVRSGMYKWEGD-AWGFD---KKGPYIELVTSPNNPDGTIR 174 (391)
T ss_dssp HHHHHHHHHHHTSSSSSEEEEECSSCCTHHH----HHHHTTCBTTEEEEEE-STTCC---CCSCEEEEEESSCTTTCCCC
T ss_pred HHHHHHHHhcCCCCCCcceEEEcCCCchhHH----HHHHHcCCeEEEecCC-HHHcC---CCCCEEEEECCCCCCCchhH
Confidence 45 34456788999 9999999999887 5567788888877753 23332 36789999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCC
Q 021783 78 DIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 156 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 156 (307)
+ +|++.++++++++|+|++|..+... .....+.+++++||||.+ |++|+|+||++++++.+.+.+...........
T Consensus 175 ~--~l~~~~~~~~~~ii~De~y~~~~~~~l~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~~~ 251 (391)
T 3bwn_A 175 E--TVVNRPDDDEAKVIHDFAYYWPHYTPITRRQDHDIMLFTFSKIT-GHAGSRIGWALVKDKEVAKKMVEYIIVNSIGV 251 (391)
T ss_dssp C--CCC-----CCCEEEEECTTCSTTTSCCCCCBCCSEEEEEHHHHH-SCGGGCEEEEEECCHHHHHHHHHHHHHHHSSC
T ss_pred H--HHHHHhhcCCCEEEEeCCCCCCCCCccccCCCCeEEEEechhhc-CCCccceEEEEecCHHHHHHHHHHhcccccCC
Confidence 7 5544223334999999999854322 112357899999999999 77899999999844556665655554333344
Q ss_pred ChhhHHHHhhccc--------------cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCce
Q 021783 157 APFDCWICLRGVK--------------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 222 (307)
Q Consensus 157 ~~~~~~~~~~~l~--------------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 222 (307)
+...+..+...++ .+....+.+.++.+.+.+.|++.+.+ ........ ............+.+
T Consensus 252 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~---~~~~p~~~-~~~f~~~~~~~~g~~ 327 (391)
T 3bwn_A 252 SKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAF---TLPKYPEA-FCNYFGKSLESYPAF 327 (391)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSE---ECCCCCCE-EETTTTEEECCCCSE
T ss_pred CHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc---ccccCCcc-ccccccccCCCcceE
Confidence 4444444444432 23334455566667777777765422 11110000 000000000113456
Q ss_pred EEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHH
Q 021783 223 LSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDK 300 (307)
Q Consensus 223 ~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~ 300 (307)
+++.+++.+ .+.+.+.++||.+++|..|. ..++++|||++. +++++.++.|.+
T Consensus 328 ~~~~~~~~~---~~~~~l~~~gV~v~pg~~fg----------------------~~~~~iRis~~~~~e~i~~~~~~L~~ 382 (391)
T 3bwn_A 328 AWLGTKEET---DLVSELRRHKVMSRAGERCG----------------------SDKKHVRVSMLSREDVFNVFLERLAN 382 (391)
T ss_dssp EEEEESSSC---CHHHHHHHTTEECEEGGGGT----------------------CCTTEEEEESCSCHHHHHHHHHHHHS
T ss_pred EEecCCcHH---HHHHHHHHCCEEEccCCCCC----------------------CCCCEEEEEecCCHHHHHHHHHHHHH
Confidence 788886432 34444566799998887642 135789999985 345666666666
Q ss_pred HHh
Q 021783 301 ALR 303 (307)
Q Consensus 301 ~l~ 303 (307)
+++
T Consensus 383 ~~~ 385 (391)
T 3bwn_A 383 MKL 385 (391)
T ss_dssp CC-
T ss_pred HHH
Confidence 553
No 131
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.92 E-value=5.4e-24 Score=187.81 Aligned_cols=246 Identities=15% Similarity=0.149 Sum_probs=165.0
Q ss_pred CCCCe-EEEcCCCCcchHHHHhhhcccC--CcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHH
Q 021783 12 GTGEE-IVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA 88 (307)
Q Consensus 12 ~~gd~-Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~ 88 (307)
++||+ |+++.+.|+++...+...++.. |++++.++. ++++++.+++++++|++++++||||.+.|+++|.++|++
T Consensus 116 ~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 193 (416)
T 1qz9_A 116 SPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS--PEELPQAIDQDTAVVMLTHVNYKTGYMHDMQALTALSHE 193 (416)
T ss_dssp STTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS--GGGHHHHCSTTEEEEEEESBCTTTCBBCCHHHHHHHHHH
T ss_pred CCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc--HHHHHHHhCCCceEEEEeccccCcccccCHHHHHHHHHH
Confidence 89997 5566678887765554444444 899999997 899999999899999999999999999999999999999
Q ss_pred cCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCcee-EEEEEcChhHHHHHHHH-H----------------
Q 021783 89 HGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMA-GVLAVKGERLAKELYFL-Q---------------- 149 (307)
Q Consensus 89 ~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~-G~~~~~~~~~~~~~~~~-~---------------- 149 (307)
||+++|+|++|+.|..+ +...++.|++++|+||+++++.+ + |+++++++.... +... .
T Consensus 194 ~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~g~~--~~g~l~~~~~~~~~-l~~~~~g~~g~~~~~~~~~~~~ 270 (416)
T 1qz9_A 194 CGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPG--SQAFVWVSPQLCDL-VPQPLSGWFGHSRQFAMEPRYE 270 (416)
T ss_dssp HTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTT--CCCEEEECTTTTTT-SCCSCCCGGGBCTTSCCCSSCC
T ss_pred cCCEEEEEccccccCcCCChhhcCCCEEEecCcccCCCCCC--CeEEEEECHHHHhc-cCCCccccCccccccCCCCccC
Confidence 99999999999977654 44445789999999999855455 6 999998764322 1110 0
Q ss_pred ------HhcCCCCChhhHHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHhcC-C--CccEEecCCCCCCCchHHHhhh
Q 021783 150 ------NAEGSGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLASH-P--RVKKVNYAGLPEHPGHELHYSQ 215 (307)
Q Consensus 150 ------~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~l~~~l~~~-~--~~~~~~~~~l~~~~~~~~~~~~ 215 (307)
.....+.+.........++ +.+....++..++.+.+.+.|++. + ++ .+..+. .
T Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~-~~~~~~------------~ 337 (416)
T 1qz9_A 271 PSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHEL-TLVTPR------------E 337 (416)
T ss_dssp BCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EECSCS------------S
T ss_pred CCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCe-EEeCCC------------C
Confidence 0111122222222222222 233445566666777777777653 2 22 111110 0
Q ss_pred ccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec-c----CC
Q 021783 216 AKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-I----ED 290 (307)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~-~----~~ 290 (307)
....++++++.+++ ...+.+.|..+||.+... .++++||+++ . ++
T Consensus 338 ~~~~~~~~~~~~~~---~~~l~~~l~~~gi~~~~~---------------------------~~~~lRis~~~~~~t~~~ 387 (416)
T 1qz9_A 338 HAKRGSHVSFEHPE---GYAVIQALIDRGVIGDYR---------------------------EPRIMRFGFTPLYTTFTE 387 (416)
T ss_dssp GGGBCSEEEEECTT---HHHHHHHHHTTTEECEEE---------------------------TTTEEEEECCTTTCCHHH
T ss_pred HHHcCCEEEEecCC---HHHHHHHHHhCCcEeccC---------------------------CCCeEEEeCcccCCCHHH
Confidence 00135678888764 456777777778865320 2456999996 2 67
Q ss_pred hHHHHHHHHHHHhcC
Q 021783 291 VNDLISDLDKALRTG 305 (307)
Q Consensus 291 ~~~~i~~l~~~l~~~ 305 (307)
++++++.|.+++++.
T Consensus 388 i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 388 VWDAVQILGEILDRK 402 (416)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcc
Confidence 777788887777643
No 132
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.92 E-value=1.5e-23 Score=183.64 Aligned_cols=275 Identities=15% Similarity=0.159 Sum_probs=179.6
Q ss_pred HH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.++ +++||+|++++++|+++. ..++..|++++.++.+ |++++++.+++++++|+++ ||+|
T Consensus 66 al~~~~~~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~---~~~G 138 (393)
T 1mdo_A 66 GMHIALMALGIGEGDEVITPSMTWVSTL----NMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPV---HYAG 138 (393)
T ss_dssp HHHHHHHHTTCCTTCEEEEESSSCHHHH----HHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCB---CGGG
T ss_pred HHHHHHHHcCCCCCCEEEeCCCccHhHH----HHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCCCceEEEEe---CCCC
Confidence 44 455566 799999999999999887 4566789999999853 7899999998889998875 4899
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccCCCCcCCccCCC-ccEEEeccc--cccccCCCceeEEEEEcChhHHHHHHHHHHh
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG-ADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNA 151 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~d~~~~s~~--K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~ 151 (307)
.+.++++|.++|+++|+++|+|++|+.|.......++ .|++++|+| |++++ | ++|+++.+++.+.+.+......
T Consensus 139 ~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K~l~~--~-~~g~~~~~~~~~~~~l~~~~~~ 215 (393)
T 1mdo_A 139 APADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNITC--A-EGGIVVTDNPQFADKLRSLKFH 215 (393)
T ss_dssp CCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTSSSCS--S-SCEEEEESCHHHHHHHHHHTBT
T ss_pred CcCCHHHHHHHHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCCcccc--c-cceEEEeCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999987543333345 899999999 88853 2 5899999765555544433221
Q ss_pred cC------------------------CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCC
Q 021783 152 EG------------------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 207 (307)
Q Consensus 152 ~~------------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~ 207 (307)
.. .......+.+....++.++...++..++.+.+.+.|++.+ + .+. .....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~-~-~~~--~~~~~- 290 (393)
T 1mdo_A 216 GLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNARRAAIAAQYHQAMADLP-F-QPL--SLPSW- 290 (393)
T ss_dssp TEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTSS-C-EEC--CCCSS-
T ss_pred CCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-c-ccc--cCCCC-
Confidence 10 1134444444445555566666666777777887777653 2 111 10000
Q ss_pred chHHHhhhccCCCceEEEEeCC---HHHHHHHHhcCCcceeecCCCCccceeecccccC---CCCCcHHHHHhcCCCCCe
Q 021783 208 GHELHYSQAKGAGSVLSFLTGS---LALSKHVVETTKYFSITVSFGSVKSLISMPCFMS---HASIPVEVRQARGLTEDL 281 (307)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~ 281 (307)
..+..+.++++.+++ .....++.+.|..+||.++.|..+.. ..|.... ...++.... ..++.
T Consensus 291 -------~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~ 358 (393)
T 1mdo_A 291 -------EHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAH-TQKYYRERFPTLTLPDTEW----NSERI 358 (393)
T ss_dssp -------CEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGG-GSHHHHHHSTTCCCHHHHH----HHTTE
T ss_pred -------CCCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCccc-cChhhhccCCccCChhHHH----HHhCE
Confidence 001234577888763 12367888888889999988764210 0010000 001111000 01457
Q ss_pred EEEEecc----CChHHHHHHHHHHHhc
Q 021783 282 VRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 282 iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+|++++. ++++++++.|+++++.
T Consensus 359 lRi~~~~~~t~~~i~~~~~~l~~~~~~ 385 (393)
T 1mdo_A 359 CSLPLFPDMTESDFDRVITALHQIAGQ 385 (393)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHhc
Confidence 9999984 5666666666666653
No 133
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.91 E-value=1.1e-23 Score=186.39 Aligned_cols=251 Identities=16% Similarity=0.111 Sum_probs=167.2
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcCC-CceEEE-EeCCCCCccccccHH---HHHH
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGP-WTKLVW-VESPTNPRQQICDIR---KIAE 84 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~~-~~~~v~-~~~~~n~tG~~~~~~---~l~~ 84 (307)
+|+|++++|+|+++. ..++..|++++.+|.+ |++++++.+++ ++++|+ +++|+||||.+++.+ +|.+
T Consensus 131 ~~~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~ 206 (422)
T 3d6k_A 131 KVKWLCPVPGYDRHF----TITEHFGFEMINVPMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAE 206 (422)
T ss_dssp CCEEEEEESCCHHHH----HHHHHHTCEEEEEEEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred CCEEEEeCCccHHHH----HHHHHcCCEEEecCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHH
Confidence 347999999998888 5567789999999873 89999999985 789988 679999999999865 7778
Q ss_pred HHH-HcCCEEEEeCccCC-CCc------CCc-------cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 85 MAH-AHGALLLVDNSIMS-PVL------SRP-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 85 ~~~-~~~~~li~D~a~~~-~~~------~~~-------~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
+|+ +||+++|+|++|+. +.. ... ...+.+++++||||+. + +|+|+||++++++ +.+.+....
T Consensus 207 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~-~GlriG~~~~~~~-l~~~l~~~~ 283 (422)
T 3d6k_A 207 MSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKIT-H-AGSGVSFFASSKE-NIEWYASHA 283 (422)
T ss_dssp CCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTS-C-TTSSCEEEECCHH-HHHHHHHHH
T ss_pred HHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhc-C-cccceEEEEeCHH-HHHHHHHHH
Confidence 887 99999999999973 111 111 2346899999999983 4 4899999999844 555555555
Q ss_pred HhcCCCCChhhHHHHhhcccc-------HHHHHHHHHHHHHHHHHHHhcC-CCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 150 NAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
.......+...+..+...++. ++...+.+.++.+.+.+.+++. +....+... . ...+.
T Consensus 284 ~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~-------------~-p~~g~ 349 (422)
T 3d6k_A 284 NVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWT-------------S-PTGGY 349 (422)
T ss_dssp HHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEC-------------C-CSBSS
T ss_pred HhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEe-------------C-CCcce
Confidence 444444555555555555543 1112233333444555555432 100000000 0 11366
Q ss_pred eEEEEeCCHHHHHHHHhcCCcceeecCCC-CccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc---CChHHHHHH
Q 021783 222 VLSFLTGSLALSKHVVETTKYFSITVSFG-SVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISD 297 (307)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~l~~~gi~v~~g-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~ 297 (307)
++++.++.. ....+.+.+.++||.+++| ..|..- ....++++|||++. +++++.++.
T Consensus 350 ~~~~~~~~~-~~~~~~~~l~~~gV~v~~~g~~f~~~------------------~~~~~~~iRis~~~~~~e~i~~~~~~ 410 (422)
T 3d6k_A 350 FISVDVVPG-TASRVVELAKEAGIALTGAGSSFPLH------------------NDPNNENIRLAPSLPPVAELEVAMDG 410 (422)
T ss_dssp CEEEEESTT-CHHHHHHHHHHTTEECCCTTTTSGGG------------------CCTTSCEEEECCSSSCHHHHHHHHHH
T ss_pred EEEEECCCC-CHHHHHHHHHHCCeEEEcCccccCCC------------------CCCCCCeEEEecCCCCHHHHHHHHHH
Confidence 788888643 2566777788899999984 433200 00125789999983 678888888
Q ss_pred HHHHHhc
Q 021783 298 LDKALRT 304 (307)
Q Consensus 298 l~~~l~~ 304 (307)
|.+++++
T Consensus 411 l~~~l~~ 417 (422)
T 3d6k_A 411 FATCVLM 417 (422)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877754
No 134
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.91 E-value=2e-23 Score=181.61 Aligned_cols=275 Identities=13% Similarity=0.118 Sum_probs=175.2
Q ss_pred HH-HHHHHh---cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 3 AL-AAVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 3 al-~~~~~~---~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
|+ .++.++ +++||+|++++++|+++.. .++..|++++.++.+ |++++++.+++++++|+++++ |
T Consensus 59 al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~---t 131 (375)
T 2fnu_A 59 ALLTLYRNFSEFSADRNEIITTPISFVATAN----MLLESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSVDY---A 131 (375)
T ss_dssp HHHHHHHHSSCCCTTSCEEEECSSSCTHHHH----HHHHTTCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEECG---G
T ss_pred HHHHHHHHhcccCCCCCEEEECCCccHhHHH----HHHHCCCEEEEeccCCCCCCCHHHHHhhcCcCceEEEEeCC---c
Confidence 44 455566 7899999999999999884 455689999999874 789999999888999888766 8
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccCCCCcCC---ccCCCccEEEeccc--cccccCCCceeEEEEE-cChhHHHHHHH
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR---PLELGADIVMHSAT--KFIAGHSDVMAGVLAV-KGERLAKELYF 147 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~---~~~~~~d~~~~s~~--K~~~g~~g~~~G~~~~-~~~~~~~~~~~ 147 (307)
|.+.|+++|.++|++||+++|+|++|+.+.... ...++ |+++.|+| |++ ++ | .|++++ +++.+.+.+..
T Consensus 132 G~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~i~~~s~s~~K~~-~~-g--~g~~~~~~~~~~~~~~~~ 206 (375)
T 2fnu_A 132 GKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFA-LASVFSFHAIKPI-TT-A--EGGAVVTNDSELHEKMKL 206 (375)
T ss_dssp GCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSS-SEEEEECCTTSSS-CC-S--SCEEEEESCHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccC-CeEEEeCCCCCCc-cc-c--CceEEEeCCHHHHHHHHH
Confidence 999999999999999999999999999776542 22223 67777777 999 55 6 566666 44555554443
Q ss_pred HHHhc--------------C--CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHH
Q 021783 148 LQNAE--------------G--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 211 (307)
Q Consensus 148 ~~~~~--------------~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~ 211 (307)
..... + .......+.+....++.+....++..++.+.+.+.|++.+++ . .....
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~--~~~~~------- 276 (375)
T 2fnu_A 207 FRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYF-T--PLHPL------- 276 (375)
T ss_dssp HTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSE-E--ESGGG-------
T ss_pred HHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-c--ccCCC-------
Confidence 32111 1 133444455555556666777777788888888888765432 1 11100
Q ss_pred HhhhccCCCceEEEEeCCH-H-HHHHHHhcCCcceeecCCCCccceeeccccc---CCCCCcHHHHHhcCCCCCeEEEEe
Q 021783 212 HYSQAKGAGSVLSFLTGSL-A-LSKHVVETTKYFSITVSFGSVKSLISMPCFM---SHASIPVEVRQARGLTEDLVRISV 286 (307)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~iRis~ 286 (307)
......+.++++.++.. . ....+.+.|..+||.++.+.. .....|... ....++.. ....++++||++
T Consensus 277 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~-p~~~~~~~~~~~~~~~~~~~----~~~~~~~lRi~~ 349 (375)
T 2fnu_A 277 --LKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYK-PIYQYQLYQQLFNTAPLKSA----EDFYHAEISLPC 349 (375)
T ss_dssp --CSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCC-CGGGSHHHHHHHCCCCCHHH----HHHHHHEEEECC
T ss_pred --CCCCcceEEEEEEeCccccchHHHHHHHHHHCCCCcccccc-ccccchhhhcCCCccCChHH----HHHHhCEEEecC
Confidence 00011234556666532 1 477888888888998874221 100000000 00001100 001136799999
Q ss_pred cc----CChHHHHHHHHHHHhcCC
Q 021783 287 GI----EDVNDLISDLDKALRTGP 306 (307)
Q Consensus 287 ~~----~~~~~~i~~l~~~l~~~~ 306 (307)
+. ++++++++.|+++++++.
T Consensus 350 ~~~~t~~~i~~~~~~l~~~~~~~~ 373 (375)
T 2fnu_A 350 HANLNLESVQNIAHSVLKTFESFK 373 (375)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhc
Confidence 85 566777777777665543
No 135
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.91 E-value=1.4e-24 Score=189.29 Aligned_cols=262 Identities=15% Similarity=0.161 Sum_probs=169.7
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCC--cEEEEecC--------------CChHHHHhhcC-CCceEEE
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT--------------CDLDEVASAIG-PWTKLVW 65 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~--------------~d~~~l~~~l~-~~~~~v~ 65 (307)
|+.+++..+++||+|++++++|++.. +...++..| .+++.++. .|++++++.+. +++++|+
T Consensus 63 a~~~~~~~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~ 140 (379)
T 3ke3_A 63 GMEAVARQLTIDEDCLIIRNGWFSYR--WTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVY 140 (379)
T ss_dssp HHHHHHHHHCTTCEEEEEECSHHHHH--HHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHhCCCCCeEEEEeCCchhHH--HHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEE
Confidence 45444456789999999999987653 223444444 46666652 58899999985 5799999
Q ss_pred EeCCCCCcccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhH
Q 021783 66 VESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 66 ~~~~~n~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
+++++|++|.+.| +++|.++|++||+++|+|++++ |..+ +...+++|++++|+||++++++| +|+++++++..
T Consensus 141 ~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~~~~~~~d~~~~s~~K~l~~~~g--~g~~~~~~~~~ 217 (379)
T 3ke3_A 141 APHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCVWLDMKELGIDVLISAPQKGWSSTPC--AGLVMLSAAAI 217 (379)
T ss_dssp EESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTCCCCHHHHTCSEEEECTTTTTCSCCC--EEEEEECHHHH
T ss_pred EEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccccccccCCCEEEecchhhcCCCCc--eEEEEECHHHH
Confidence 9999999999999 9999999999999999999998 7655 55667899999999999988888 89999986643
Q ss_pred HHHHHH----------------HHHh-cC-----CCCChhhHHHHhhccccH-----HHHHHHHHHHHHHHHHHHhcCCC
Q 021783 142 AKELYF----------------LQNA-EG-----SGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPR 194 (307)
Q Consensus 142 ~~~~~~----------------~~~~-~~-----~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~l~~~~~ 194 (307)
.. +.. ...+ .+ .+.+....+....+++.+ +...++..+..+.+.+.+++..
T Consensus 218 ~~-l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g- 295 (379)
T 3ke3_A 218 KK-VESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKG- 295 (379)
T ss_dssp HH-HHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred Hh-hhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 32 221 0000 11 133333333333444322 3334444555566666666541
Q ss_pred ccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHh
Q 021783 195 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 274 (307)
Q Consensus 195 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~ 274 (307)
+ . +..+.....+.+..+..++.+ . .+.+.|.++||.++.|..++. ..|
T Consensus 296 ~--------~------~~~~~~~~~~~i~~~~~~~~~-~-~~~~~L~~~Gi~v~~g~~~~~-~~~--------------- 343 (379)
T 3ke3_A 296 I--------E------SVAAEGFEAPGVVVSYTERDD-M-HKGSAFAEAGLQIAAGVPLKV-GEP--------------- 343 (379)
T ss_dssp C--------C------BSBCTTCBCSSEEEEECSCHH-H-HSSHHHHHTTCCCEECCCCSS-CCC---------------
T ss_pred C--------E------ecCCccccCceEEEEccCCcc-h-HHHHHHHHCCeEEeCCccccc-ccc---------------
Confidence 1 0 000000111234445555433 2 225556678998887764221 001
Q ss_pred cCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 275 RGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 275 ~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
...+++|+|++. +|++++++.|+++++++
T Consensus 344 --~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~ 376 (379)
T 3ke3_A 344 --DNFKTFRLGLFGLDKLTDIDGTVERFEKALDEV 376 (379)
T ss_dssp --TTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHH
T ss_pred --CcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHh
Confidence 125679999964 89999999999888653
No 136
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.91 E-value=4.1e-23 Score=182.52 Aligned_cols=241 Identities=15% Similarity=0.075 Sum_probs=158.7
Q ss_pred HHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC----C---ChHHHHhhcC---CCceEEEEeCCCCCccccc
Q 021783 8 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----C---DLDEVASAIG---PWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 8 ~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~----~---d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~ 77 (307)
.+++++||+|++++|+|+++. ..++..|++++.++. + |++++++.++ ++++++++++|+||||.++
T Consensus 137 ~~~~~~gd~Vlv~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~ 212 (420)
T 4f4e_A 137 LRTLNPKAKVAISDPSWENHR----ALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDL 212 (420)
T ss_dssp HHHHCTTCCEEEEESCCHHHH----HHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCC
T ss_pred HHHhCCCCEEEEeCCCcHhHH----HHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCC
Confidence 456799999999999998887 566778999999987 2 8999999997 6789999999999999997
Q ss_pred c---HHHHHHHHHHcCCEEEEeCccCCCCcC----------CccCCCccEEEeccccccccCCCceeEEEEE--cChhHH
Q 021783 78 D---IRKIAEMAHAHGALLLVDNSIMSPVLS----------RPLELGADIVMHSATKFIAGHSDVMAGVLAV--KGERLA 142 (307)
Q Consensus 78 ~---~~~l~~~~~~~~~~li~D~a~~~~~~~----------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~--~~~~~~ 142 (307)
+ +++|+++|++||+++|+|++|+..... .....+.+++++|+||.+ +++|+|+|++++ +++...
T Consensus 213 ~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~~~~~~~~~~~ 291 (420)
T 4f4e_A 213 NDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSF-SLYGERVGALSIITDSKDEA 291 (420)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTT-TCGGGCEEEEEEECSSHHHH
T ss_pred CHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccC-cCcCCCcEEEEEEcCCHHHH
Confidence 6 778999999999999999999744321 112346789999999999 778999999875 334333
Q ss_pred HH-HHHH---HHhcCCCCChhhHHHHhhcccc----------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc
Q 021783 143 KE-LYFL---QNAEGSGLAPFDCWICLRGVKT----------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 208 (307)
Q Consensus 143 ~~-~~~~---~~~~~~~~~~~~~~~~~~~l~~----------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 208 (307)
+. .... ........+...+..+...+.. ++...+.+.++.+.+.+.|++... .++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-----------~~~ 360 (420)
T 4f4e_A 292 ARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGI-----------ERD 360 (420)
T ss_dssp HHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----------SSC
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----------CCC
Confidence 22 2222 2222233344444443333322 233344455555666666654310 012
Q ss_pred hHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 209 HELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
+....+ ..+.++++.++ ...+...+.++||.+.++ .|+|++.
T Consensus 361 ~~~~~~---~~g~~~~~~~~----~~~~~~~l~~~gI~v~~~-------------------------------~Ris~~~ 402 (420)
T 4f4e_A 361 FSFINA---QRGMFSYSGLT----SAQVDRLREEFGIYAVST-------------------------------GRICVAA 402 (420)
T ss_dssp CTHHHH---SCSSEEECCCC----HHHHHHHHHHHCEECCTT-------------------------------SEEEGGG
T ss_pred ceeECC---CccEEEEeCCC----HHHHHHHHHhCCEEecCC-------------------------------CeEEEec
Confidence 222211 12333333333 234455556678876541 3788863
Q ss_pred ---CChHHHHHHHHHHH
Q 021783 289 ---EDVNDLISDLDKAL 302 (307)
Q Consensus 289 ---~~~~~~i~~l~~~l 302 (307)
+++++.++.|.+++
T Consensus 403 ~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 403 LNTRNLDVVANAIAAVL 419 (420)
T ss_dssp CCTTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 67888888888776
No 137
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.91 E-value=9.4e-23 Score=179.56 Aligned_cols=178 Identities=13% Similarity=0.166 Sum_probs=127.1
Q ss_pred HhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcC---CCceEEEEeCCCCCcccccc
Q 021783 9 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG---PWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 9 ~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~ 78 (307)
+++++||+|++++|+|+++. ..++..|++++.++.. |++++++.++ ++++++++++|+||||.+++
T Consensus 126 ~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~ 201 (409)
T 4eu1_A 126 RFVANCNRIYGPDVGYPNHE----SIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPT 201 (409)
T ss_dssp GTSSSCCEEEEESSCCTHHH----HHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCC
T ss_pred HhcCCCCEEEEeCCCcHhHH----HHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCC
Confidence 46689999999999998887 6667789999999862 7899999985 45677777999999999997
Q ss_pred ---HHHHHHHHHHcCCEEEEeCccCCCCcCC-----------ccCCCccEEEeccccccccCCCceeEEE--EEcChh--
Q 021783 79 ---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----------PLELGADIVMHSATKFIAGHSDVMAGVL--AVKGER-- 140 (307)
Q Consensus 79 ---~~~l~~~~~~~~~~li~D~a~~~~~~~~-----------~~~~~~d~~~~s~~K~~~g~~g~~~G~~--~~~~~~-- 140 (307)
+++|+++|++||+++|+|++|+...... ....+..++++|+||.+ |.+|+|+|++ ++.++.
T Consensus 202 ~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~riG~~~~v~~~~~~~ 280 (409)
T 4eu1_A 202 HDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNF-GLYGHRCGALHISTASAEEA 280 (409)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTS-SCGGGCCEEEEEECSSHHHH
T ss_pred HHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccc-cCccCCceEEEEEeCCHHHH
Confidence 5569999999999999999997543221 12234678999999999 6779999997 666665
Q ss_pred --HHHHHHHHHHhcCCCCChhhHHHHhhcccc----------HHHHHHHHHHHHHHHHHHHhc
Q 021783 141 --LAKELYFLQNAEGSGLAPFDCWICLRGVKT----------MALRVEKQQDNAQKIAEFLAS 191 (307)
Q Consensus 141 --~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------~~~~~~~~~~~~~~l~~~l~~ 191 (307)
+.+.+...........+...+..+...++. +....+.+.++.+.+.+.|++
T Consensus 281 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 343 (409)
T 4eu1_A 281 KRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKA 343 (409)
T ss_dssp HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 434444433333344445555555444432 233344455555666666654
No 138
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.91 E-value=1.8e-22 Score=177.31 Aligned_cols=122 Identities=12% Similarity=0.117 Sum_probs=100.2
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcC---CCceEEEEeCCCCCcccccc-
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG---PWTKLVWVESPTNPRQQICD- 78 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~- 78 (307)
+++|||+|++++|+|.++. ..++..|++++.++.+ |++++++.+. ++++++++++|+||||.+++
T Consensus 119 ~~~~gd~Vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~ 194 (401)
T 7aat_A 119 FFKFSRDVYLPKPSWGNHT----PIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQ 194 (401)
T ss_dssp HCTTCCEEEEEESCCTTHH----HHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCH
T ss_pred hccCCCEEEEcCCCchhHH----HHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCH
Confidence 4589999999999999888 5567789999999863 6676665554 67899999999999998875
Q ss_pred --HHHHHHHHHHcCCEEEEeCccCCCCcCC-----------ccCCCccEEEeccccccccCCCceeEEEEE
Q 021783 79 --IRKIAEMAHAHGALLLVDNSIMSPVLSR-----------PLELGADIVMHSATKFIAGHSDVMAGVLAV 136 (307)
Q Consensus 79 --~~~l~~~~~~~~~~li~D~a~~~~~~~~-----------~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~ 136 (307)
+++|+++|++||+++|+|++|....... ....+.+++++|+||.+ |.+|+|+|++++
T Consensus 195 ~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~RiG~l~~ 264 (401)
T 7aat_A 195 EQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNM-GLYGERAGAFTV 264 (401)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTS-CCGGGCEEEEEE
T ss_pred HHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCccc-ccccCceEEEEE
Confidence 8899999999999999999997543321 12335789999999999 778999999987
No 139
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.91 E-value=3.1e-24 Score=184.11 Aligned_cols=210 Identities=9% Similarity=0.109 Sum_probs=143.9
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
|+.++...+ ||+|+++ |+|+++. ..++..|++++.+|.+ |++++ +++++|++++|+||||.++
T Consensus 88 al~~~~~~~--gd~Vl~~-p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~ 155 (335)
T 1uu1_A 88 IIYVMMLMF--DRSVFFP-PTYSCYR----IFAKAVGAKFLEVPLTKDLRIPEVNV-----GEGDVVFIPNPNNPTGHVF 155 (335)
T ss_dssp HHHHHHHHS--SEEEECS-SSCHHHH----HHHHHHTCEEEECCCCTTSCCCCCCC-----CTTEEEEEESSCTTTCCCC
T ss_pred HHHHHHHHh--CCcEEEC-CCcHHHH----HHHHHcCCeEEEeccCCCCCCCHHHc-----CCCCEEEEeCCCCCCCCCC
Confidence 443333434 9999999 9998877 5566789999999864 34444 5789999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCccCCC----CcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcC
Q 021783 78 DIRKIAEMAHAHGALLLVDNSIMSP----VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 153 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~~~~----~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~ 153 (307)
+.+++.++++.+| ++|+|++|+.. ........+.+++++|+||++ |++|+|+|++++++ .+.+.+..... .
T Consensus 156 ~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~-~~~~~l~~~~~--~ 230 (335)
T 1uu1_A 156 EREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAF-SLAAQRVGYVVASE-KFIDAYNRVRL--P 230 (335)
T ss_dssp CHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTT-TCGGGCCEEEEECH-HHHHHHHHHSC--T
T ss_pred CHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhc-CCcccCeEEEEeCH-HHHHHHHHhcC--C
Confidence 9999999999989 99999999732 122223456889999999999 66789999999964 45444443322 1
Q ss_pred CCCChhhHHHHhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH
Q 021783 154 SGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 230 (307)
Q Consensus 154 ~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (307)
...+...+..+...++. +....+...++.+.+.+.+++. ++ .+ . +..++++++.+++
T Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~-------~----------~~~~~~~~~~~~~- 290 (335)
T 1uu1_A 231 FNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GY-RI-------T----------DSRGNFVFVFMEK- 290 (335)
T ss_dssp TCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH-TC-CB-------C----------CCCSSEEEEECCT-
T ss_pred CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-Cc-EE-------c----------CCCCeEEEEECCC-
Confidence 24445555555555543 3334455556666666666543 11 00 0 1135677888876
Q ss_pred HHHHHHHhcCCcceeecCC
Q 021783 231 ALSKHVVETTKYFSITVSF 249 (307)
Q Consensus 231 ~~~~~~~~~l~~~gi~v~~ 249 (307)
.+..++.+.|.++||.++.
T Consensus 291 ~~~~~~~~~l~~~gi~v~~ 309 (335)
T 1uu1_A 291 EEKERLLEHLRTKNVAVRS 309 (335)
T ss_dssp HHHHHHHHHHHHHTEEEEE
T ss_pred CCHHHHHHHHHHCCEEEEE
Confidence 3467788888788887764
No 140
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.5e-24 Score=194.27 Aligned_cols=240 Identities=17% Similarity=0.195 Sum_probs=171.6
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHH
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA 88 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~ 88 (307)
|+|+++.+.|+++. ..++..|++++.++.+ |++++++++++++++|++++|+||+|.+.|+++|.++|++
T Consensus 159 ~~Vi~~~~~h~~~~----~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~la~~ 234 (497)
T 3mc6_A 159 PEIIAPVTAHAGFD----KAAYYFGMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQK 234 (497)
T ss_dssp CEEEEETTSCHHHH----HHHHHSCCEEEEECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTTHHHH
T ss_pred ceEEEeCCccHHHH----HHHHHcCCeEEEEecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHHHHHH
Confidence 89999999999887 6677789999999864 5899999999999999999999999999999999999999
Q ss_pred cCCEEEEeCccCCC-----------Cc--CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH-HHhcCC
Q 021783 89 HGALLLVDNSIMSP-----------VL--SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QNAEGS 154 (307)
Q Consensus 89 ~~~~li~D~a~~~~-----------~~--~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~-~~~~~~ 154 (307)
||+++|+|++|+.+ .. .+....|+|++++|+||+++++.+ +|+++++++.+....... ..+.+.
T Consensus 235 ~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~ 312 (497)
T 3mc6_A 235 YKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKG--SSVIMYRNSDLRMHQYYVNPAWTGG 312 (497)
T ss_dssp TTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSS--CEEEECSSHHHHTTTSCCBTTCTTS
T ss_pred hCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCC--ceeEEecCHHHHhhhhcccccccCC
Confidence 99999999999732 12 134456899999999999867666 899999877554321100 000010
Q ss_pred ---C------CC---hhhHHHHhhcc--ccHHHHHHHHHHHHHHHHHHHhcC-CCccEEecCCCCCCCchHHHhhhccCC
Q 021783 155 ---G------LA---PFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 155 ---~------~~---~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
. .. ...++.++..+ ..+....++..++++.+.+.|++. +++. +..+ ..
T Consensus 313 ~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~-~~~~----------------~~ 375 (497)
T 3mc6_A 313 LYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLD-IMGN----------------PR 375 (497)
T ss_dssp CBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCE-ECSC----------------CC
T ss_pred CcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE-EecC----------------CC
Confidence 0 00 12244433333 234555677778888888888873 4331 1111 13
Q ss_pred CceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec---cCChHHHHH
Q 021783 220 GSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IEDVNDLIS 296 (307)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~---~~~~~~~i~ 296 (307)
+++++|...+.+ ..++.+.|..+||.++.+.. ++.+|++++ .++++++++
T Consensus 376 ~~~v~~~~~~~~-~~~l~~~L~~~Gi~v~~~~~--------------------------~~~~ri~~~~~t~e~i~~~~~ 428 (497)
T 3mc6_A 376 YSVISFSSKTLN-IHELSDRLSKKGWHFNALQK--------------------------PVALHMAFTRLSAHVVDEICD 428 (497)
T ss_dssp SSEEEEECTTTT-HHHHHHHHHTTTCBCEECCS--------------------------SCCEEEECCTTTTCTHHHHHH
T ss_pred eeEEEEeCCCCC-HHHHHHHHHhCCEEEecCCC--------------------------CCeEEEEEeCCCHHHHHHHHH
Confidence 667888776543 77888888888887654332 223788886 389999999
Q ss_pred HHHHHHhc
Q 021783 297 DLDKALRT 304 (307)
Q Consensus 297 ~l~~~l~~ 304 (307)
.|.+++++
T Consensus 429 ~L~~~l~~ 436 (497)
T 3mc6_A 429 ILRTTVQE 436 (497)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 141
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.91 E-value=5.2e-23 Score=183.23 Aligned_cols=256 Identities=13% Similarity=0.065 Sum_probs=163.4
Q ss_pred HHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC---C-----ChHHHHhhcC---CCceEEEEeCCCCCccc
Q 021783 7 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---C-----DLDEVASAIG---PWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 7 ~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~-----d~~~l~~~l~---~~~~~v~~~~~~n~tG~ 75 (307)
+.+++.+||+|++++|+|+++...+...++..|++++.++. + |++++++.++ ++++++++++|+||||.
T Consensus 138 ~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~ 217 (448)
T 3meb_A 138 FLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGI 217 (448)
T ss_dssp HHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCC
T ss_pred HHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCc
Confidence 45577899999999999998884333222278999988886 2 7899999886 46788889999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCccCCCCcCC-------c----cCCCccEEEeccccccccCCCceeEEE--EE---
Q 021783 76 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-------P----LELGADIVMHSATKFIAGHSDVMAGVL--AV--- 136 (307)
Q Consensus 76 ~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~-------~----~~~~~d~~~~s~~K~~~g~~g~~~G~~--~~--- 136 (307)
+++ +++|+++|++||+++|+|++|....... . .....++++.|+||.+ |++|.|.|++ ++
T Consensus 218 ~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~l~~v~~~~ 296 (448)
T 3meb_A 218 DFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNF-GLYGERIGCLHVVHAGV 296 (448)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTS-CCGGGCCEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccC-CCccccceeeeeeeccc
Confidence 987 5669999999999999999987433221 0 1224568899999999 6789999998 66
Q ss_pred -----cCh----hHHHHHHHHHHhcCCCCChhhHHHHhhcccc----------HHHHHHHHHHHHHHHHHHHhcCCCccE
Q 021783 137 -----KGE----RLAKELYFLQNAEGSGLAPFDCWICLRGVKT----------MALRVEKQQDNAQKIAEFLASHPRVKK 197 (307)
Q Consensus 137 -----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------~~~~~~~~~~~~~~l~~~l~~~~~~~~ 197 (307)
+++ .+.+.+....+......+...+..+...+.. +....+++.++.+.+.+.|++..
T Consensus 297 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~---- 372 (448)
T 3meb_A 297 EGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRK---- 372 (448)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----
T ss_pred cccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----
Confidence 444 3333344444444444555555555555433 22333444555555666665431
Q ss_pred EecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCC
Q 021783 198 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 277 (307)
Q Consensus 198 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~ 277 (307)
.++......+.... + .++++.|.--+.+.... .+.++||.+.+|.
T Consensus 373 --~~~~~~~~~~~~~~--~--~~g~~~~~~~~~~~~~~---ll~~~gV~v~~G~-------------------------- 417 (448)
T 3meb_A 373 --TPGPGSKGTWDHIL--T--AIGMFTFTGLTPEHVDY---LKEKWSIYLVKAG-------------------------- 417 (448)
T ss_dssp --CCCSTTTCCCTHHH--H--CCSSEEECCCCHHHHHH---HHHHHCEEECSGG--------------------------
T ss_pred --CCCcCcccccceeC--C--CceEEEecCCCHHHHHH---HHHhCCEEEeCCC--------------------------
Confidence 01100000121111 1 23444442222222222 2345688776543
Q ss_pred CCCeEEEEecc---CChHHHHHHHHHHHhcCC
Q 021783 278 TEDLVRISVGI---EDVNDLISDLDKALRTGP 306 (307)
Q Consensus 278 ~~~~iRis~~~---~~~~~~i~~l~~~l~~~~ 306 (307)
.|||++. +++++.++.|.+++++++
T Consensus 418 ----gRis~a~~~~~~i~~~~~~l~~~l~~~~ 445 (448)
T 3meb_A 418 ----GRMSMCGLTESNCDYVAEAIHDAVTKLP 445 (448)
T ss_dssp ----GEEEGGGCCTTTHHHHHHHHHHHHHHSC
T ss_pred ----cEEEEecCCHHHHHHHHHHHHHHHHhcc
Confidence 4888853 789999999999988664
No 142
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.91 E-value=1.2e-22 Score=179.04 Aligned_cols=227 Identities=16% Similarity=0.161 Sum_probs=167.3
Q ss_pred HH-HHHHHhcCCCCeEEEcC-CCCcchHHHHh------hhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeC-
Q 021783 3 AL-AAVTHLLGTGEEIVAGD-DLYGGTDRLLS------RVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVES- 68 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~-~~~~~~~~~~~------~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~- 68 (307)
|+ .++.++++|||+|++++ +.|.++...+. ..++..|++++.++.+ |++++++++++++++|++++
T Consensus 95 Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~~tk~V~i~~s 174 (431)
T 3ht4_A 95 AISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHSNTKMIGIQRS 174 (431)
T ss_dssp HHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCCTTEEEEEEECS
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcCCCCeEEEEECC
Confidence 45 55666899999999998 99988774432 3456689999999984 99999999999999999995
Q ss_pred CCCCcccc---ccHHHHHHHHHH--cCCEEEEeCccCCCCc-CCccCCCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 69 PTNPRQQI---CDIRKIAEMAHA--HGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 69 ~~n~tG~~---~~~~~l~~~~~~--~~~~li~D~a~~~~~~-~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
++||+|.. .++++|.++|++ +|+++|+|++|+.+.. ..+..+|+|++++|++|+++|..+..+|+++++++ +.
T Consensus 175 p~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~-li 253 (431)
T 3ht4_A 175 KGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIVKTGGYIVGKEQ-YV 253 (431)
T ss_dssp CTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGGTTCSEEEEETTSGGGTTTCSSCEEEEECHH-HH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCccccCCeEEEcCccccCCCCCCCceEEEEecHH-HH
Confidence 66665554 579999999999 9999999999998875 36667789999999999987633344699999854 44
Q ss_pred HHHHHHHHh--cCCC--CChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 143 KELYFLQNA--EGSG--LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 143 ~~~~~~~~~--~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+.+...... .+.. .+...+++...+++.+..+.++..+++..+.+.|++... .+ ++. .+. ++
T Consensus 254 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~l~~~L~~~g~--~v-~p~-~~~----------~~ 319 (431)
T 3ht4_A 254 EACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTAAFLEKLGM--NT-SPA-WNA----------PR 319 (431)
T ss_dssp HHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CE-ESC-TTS----------CC
T ss_pred HHHHHHhccCCcccccCccHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHhCcC--Ee-cCC-CCC----------CC
Confidence 444433222 2211 212235566677777788889999999999999987642 22 332 111 22
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCcce
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYFS 244 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~g 244 (307)
.+.++.+.+++.+....+.+.++...
T Consensus 320 ~~li~~i~l~~~~~~~~~~~~l~~~~ 345 (431)
T 3ht4_A 320 TDLIQSVQFDDKDRMIAFCQAIQYAS 345 (431)
T ss_dssp SSSCCEEECCCHHHHHHHHHHHHHTS
T ss_pred ccEEEEEEeCCHHHHHHHHHHHHhcC
Confidence 34578888888777888888887653
No 143
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.91 E-value=2.4e-23 Score=189.01 Aligned_cols=127 Identities=17% Similarity=0.259 Sum_probs=103.2
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-------CChHHHHhhcCCCceEEEEeCCCCCcccccc---H
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---I 79 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---~ 79 (307)
+++|||+|++++|+|+.+.... .....|++++.++. .|++++++.+.+++++|++++|+||||.+++ +
T Consensus 190 l~~~Gd~Vlv~~P~y~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l 267 (546)
T 2zy4_A 190 LLKAGDKVAIGMPVFTPYIEIP--ELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSL 267 (546)
T ss_dssp SSCTTCEEEEEESCCHHHHHHH--HSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHH
T ss_pred cCCCCCEEEEeCCCCccHHHHH--HHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHH
Confidence 4789999999999998887331 14456889998886 3788999888888999999999999999986 6
Q ss_pred HHHHHHH--HHcCCEEEEeCccCCCCc--CCcc--CCCccEEEeccccccccCCCceeEEEEEcCh
Q 021783 80 RKIAEMA--HAHGALLLVDNSIMSPVL--SRPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 80 ~~l~~~~--~~~~~~li~D~a~~~~~~--~~~~--~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
++|+++| +++|+++|+|++|+.... .... ..+.++++.|+||++ |.+|+|+||++++++
T Consensus 268 ~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 268 ERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYF-GATGWRLGVVAAHQQ 332 (546)
T ss_dssp HHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTT-TCGGGCEEEEEEESS
T ss_pred HHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCcccc-CCCCcceEEEEECCH
Confidence 7788888 788999999999984332 1111 125789999999999 678999999999875
No 144
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.90 E-value=1.3e-22 Score=177.84 Aligned_cols=240 Identities=11% Similarity=0.052 Sum_probs=157.2
Q ss_pred HHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC----C---ChHHHHhhcC---CCceEEEEeCCCCCccccc
Q 021783 8 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----C---DLDEVASAIG---PWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 8 ~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~----~---d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~ 77 (307)
.+++++||+|+++.|+|+++. ..++..|++++.++. + |++++++.++ ++++++++++|+||||.++
T Consensus 115 ~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~ 190 (397)
T 3fsl_A 115 LKRYFPESGVWVSDPTWENHV----AIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADL 190 (397)
T ss_dssp HHHHCTTCCEEEESSCCHHHH----HHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCC
T ss_pred HHhcCCCCeEEEeCCCchhHH----HHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCC
Confidence 456799999999999998887 556778999999987 3 8999999997 6788999999999999997
Q ss_pred c---HHHHHHHHHHcCCEEEEeCccCCCCcC----------CccCCCccEEEeccccccccCCCceeEEEEE--cChhHH
Q 021783 78 D---IRKIAEMAHAHGALLLVDNSIMSPVLS----------RPLELGADIVMHSATKFIAGHSDVMAGVLAV--KGERLA 142 (307)
Q Consensus 78 ~---~~~l~~~~~~~~~~li~D~a~~~~~~~----------~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~--~~~~~~ 142 (307)
+ +++|+++|++||+++|+|++|+..... .....+.+++++|+||.+ |++|+|+|++++ .+....
T Consensus 191 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~riG~~~~~~~~~~~~ 269 (397)
T 3fsl_A 191 TNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIF-SLYGERVGGLSVMCEDAEAA 269 (397)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTT-TCGGGCCEEEEEECSSHHHH
T ss_pred CHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccc-cCcCCCeeEEEEecCCHHHH
Confidence 5 669999999999999999999754422 012346789999999999 778999999986 333333
Q ss_pred H-HHHHHHH---hcCCCCChhhHHHHhhccc----------cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc
Q 021783 143 K-ELYFLQN---AEGSGLAPFDCWICLRGVK----------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 208 (307)
Q Consensus 143 ~-~~~~~~~---~~~~~~~~~~~~~~~~~l~----------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 208 (307)
. ....... ......+...+..+...+. .+....+.+.++.+.+.+.|++... . .+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~------~-----~~ 338 (397)
T 3fsl_A 270 GRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMP------E-----RN 338 (397)
T ss_dssp HHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT------T-----SC
T ss_pred HHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------C-----CC
Confidence 2 2222221 2222333333333332222 2333445555666666666664320 0 01
Q ss_pred hHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 209 HELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
+....+ ..+.++++.++ ...+...+.++||.+++|+ |||++.
T Consensus 339 ~~~~~~---~~~~~~~~~~~----~~~~~~~l~~~gi~v~~g~-------------------------------Ris~~~ 380 (397)
T 3fsl_A 339 FDYLLN---QRGMFSYTGLS----AAQVDRLREEFGVYLIASG-------------------------------RMCVAG 380 (397)
T ss_dssp CTHHHH---CCSSEEECCCC----HHHHHHHHHTTCEECCTTC-------------------------------EEEGGG
T ss_pred ceeecC---CceEEEecCCC----HHHHHHHHHhCCEEECCCC-------------------------------eEEEEe
Confidence 112111 12334444443 2335555667889876532 677754
Q ss_pred ---CChHHHHHHHHHH
Q 021783 289 ---EDVNDLISDLDKA 301 (307)
Q Consensus 289 ---~~~~~~i~~l~~~ 301 (307)
+++++.++.|.++
T Consensus 381 ~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 381 LNTANVQRVAKAFAAV 396 (397)
T ss_dssp CCTTTHHHHHHHHHHH
T ss_pred cCHhhHHHHHHHHHhh
Confidence 6677777777665
No 145
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.90 E-value=2.7e-23 Score=184.28 Aligned_cols=270 Identities=19% Similarity=0.168 Sum_probs=157.5
Q ss_pred CCCCeEEEcCCCCcc-------------hHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCC
Q 021783 12 GTGEEIVAGDDLYGG-------------TDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNP 72 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~-------------~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~ 72 (307)
++||+|+++.|+|.. ....+..+++..|++++.++.+ |++++++++++++++|++++++||
T Consensus 108 ~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~np 187 (432)
T 3a9z_A 108 LQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNE 187 (432)
T ss_dssp HC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEECCSBCTT
T ss_pred cCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCCceEEEEECcccC
Confidence 589877777776654 3344445566789999999863 789999999989999999999999
Q ss_pred ccccccHHHHHHHHHHcC----------CEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhH
Q 021783 73 RQQICDIRKIAEMAHAHG----------ALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~----------~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
||.+.|+++|.++|+++| +++|+|++|+.+..+ +....+.|++++|+||++ |+. +|+++++++..
T Consensus 188 tG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~~~d~~~~s~~K~~-g~~---~G~~~~~~~~~ 263 (432)
T 3a9z_A 188 TGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFY-GPR---IGALYVRGVGK 263 (432)
T ss_dssp TCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHHCCSEEEEEGGGTT-CCS---CEEEEETTBTT
T ss_pred cccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhcCCCEEEEehhHhc-CCc---ceEEEEccccc
Confidence 999999999999999999 999999999877644 333457899999999988 543 89999986541
Q ss_pred HHHHHHH-------HHhcCCCCChhhHHHHhhccccHH----HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchH
Q 021783 142 AKELYFL-------QNAEGSGLAPFDCWICLRGVKTMA----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 210 (307)
Q Consensus 142 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~ 210 (307)
...+... ......+.+.........+++.+. ...+...+..+.+.+.|++.+++ .+....-. +
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~~~~--~--- 337 (432)
T 3a9z_A 264 LTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFGK-RIHLNSRF--P--- 337 (432)
T ss_dssp TBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG-GEEESSCC--T---
T ss_pred cCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccCC-cEEEeCCC--C---
Confidence 1111100 011112233333333333443322 23334444555555555543211 11111100 0
Q ss_pred HHhhhccCCCceEEEEeCCH-HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC----CCeEEEE
Q 021783 211 LHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRIS 285 (307)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~iRis 285 (307)
..+..+++++|.+.+. .....+.+.+. ++.++.|..+... . ...........|.. ++++|||
T Consensus 338 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~G~~~~~~----~---~~~~~~~l~~~g~~~~~~~~~iRis 404 (432)
T 3a9z_A 338 ----GVERLPNTCNFSIQGSQLRGYMVLAQCQ--TLLASVGASCHSD----H---EDRPSPVLLSCGIPVDVARNAVRLS 404 (432)
T ss_dssp ----TCCBCTTEEEEEECSTTCCHHHHHHHCS--SEECBSSCGGGGG----G---TTSCCHHHHHTTCCHHHHTTEEEEE
T ss_pred ----cccCCCCEEEEEeCCCCCcHHHHHHHhc--CeEEeccccccCC----C---CCCccHHHHhcCCCccccCceEEEE
Confidence 0012345777877542 12456666664 6888877653311 0 00011222334432 4789999
Q ss_pred ecc----CChHHHHHHHHHHHhc
Q 021783 286 VGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 286 ~~~----~~~~~~i~~l~~~l~~ 304 (307)
++. ++++++++.|++++++
T Consensus 405 ~~~~~t~eei~~~~~~l~~~~~~ 427 (432)
T 3a9z_A 405 VGRSTTRAEVDLIVQDLKQAVNQ 427 (432)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHH
Confidence 984 6677777777776653
No 146
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.90 E-value=2.7e-23 Score=187.34 Aligned_cols=246 Identities=15% Similarity=0.118 Sum_probs=171.9
Q ss_pred eEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHc
Q 021783 16 EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH 89 (307)
Q Consensus 16 ~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~ 89 (307)
+|+++.++|.++. ..++..|++++.+|.+ |+++++++++++|++|++++++||||.+.|+++|.++|+++
T Consensus 156 ~vi~~~~~h~s~~----~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~ 231 (502)
T 3hbx_A 156 NIVTGANVQVCWE----KFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEK 231 (502)
T ss_dssp EEEEETTCCHHHH----HHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCCHHHHHHHHHHH
T ss_pred EEEEcCCchHHHH----HHHHHcCceeEEEecCCCcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccCHHHHHHHHHHh
Confidence 9999999998877 6678889999999863 88999999999999999999999999999999999999999
Q ss_pred ------CCEEEEeCccCCCC-------cC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHH-HHHHHHHHhcC-
Q 021783 90 ------GALLLVDNSIMSPV-------LS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYFLQNAEG- 153 (307)
Q Consensus 90 ------~~~li~D~a~~~~~-------~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~-~~~~~~~~~~~- 153 (307)
|+++++|++|+.+. .. +....++|++++|+||++.++.| +|+++++++... +.+.....+.+
T Consensus 232 ~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g--~G~~~~~~~~~l~~~~~~~~~yl~~ 309 (502)
T 3hbx_A 232 NKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGA 309 (502)
T ss_dssp HHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSS--CEEEEESSGGGSCGGGCEEECSSSS
T ss_pred hhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCC--eEEEEEeCHHHhhHHhccCcccccC
Confidence 99999999998433 11 22234799999999999988877 898888765432 11110001111
Q ss_pred ---------CCC--ChhhHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCC
Q 021783 154 ---------SGL--APFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 220 (307)
Q Consensus 154 ---------~~~--~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 220 (307)
+.. ....+|.++. +.+.+..+.++..++++.+.+.|+..+.+. +..+ ....
T Consensus 310 ~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~---------------~~~~ 373 (502)
T 3hbx_A 310 DQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFN-IVSK---------------DEGV 373 (502)
T ss_dssp CEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEE-ECSC---------------SSSS
T ss_pred CCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE-EEeC---------------CCCc
Confidence 111 1223333333 234556777888888889999998775431 1111 0135
Q ss_pred ceEEEEeCCH--HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHH
Q 021783 221 SVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDL 294 (307)
Q Consensus 221 ~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~ 294 (307)
++++|.+.+. .....+.+.|...|+.++. ...|... .+..++|++++. ++++.+
T Consensus 374 ~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~------~~~p~~~--------------~~~~~lRisv~~~~t~edid~l 433 (502)
T 3hbx_A 374 PLVAFSLKDSSCHTEFEISDMLRRYGWIVPA------YTMPPNA--------------QHITVLRVVIREDFSRTLAERL 433 (502)
T ss_dssp SEEEEEESSCSSCCHHHHHHHHHTTTCBCCE------EECCTTC--------------TTCEEEEEECCTTCCHHHHHHH
T ss_pred eEEEEEecCCCcCCHHHHHHHHHhCCcEEee------ccCCccc--------------CCceEEEEEeCCCCCHHHHHHH
Confidence 6888888542 2355788888888887743 1122110 124579999984 677777
Q ss_pred HHHHHHHHh
Q 021783 295 ISDLDKALR 303 (307)
Q Consensus 295 i~~l~~~l~ 303 (307)
++.|+++++
T Consensus 434 i~~L~~~l~ 442 (502)
T 3hbx_A 434 VIDIEKVMR 442 (502)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777664
No 147
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.90 E-value=2.6e-22 Score=177.21 Aligned_cols=227 Identities=19% Similarity=0.179 Sum_probs=153.4
Q ss_pred HH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCcc
Q 021783 3 AL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 3 al-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG 74 (307)
|+ .++.++ +++||+|+++.++|.++. ..++..|++++.++.+ |++++++.+++++++|+++ ||||
T Consensus 69 al~~~~~~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~~G 141 (418)
T 2c81_A 69 ALMLALEALGIGEGDEVIVPSLTWIATA----TAVLNVNALPVFVDVEADTYCIDPQLIKSAITDKTKAIIPV---HLFG 141 (418)
T ss_dssp HHHHHHHHTTCCTTCEEEEESSSCTHHH----HHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCTTEEEECCB---CCTT
T ss_pred HHHHHHHHcCCCCcCEEEECCCccHhHH----HHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCCCCeEEEEe---CCcC
Confidence 44 455566 789999999999999888 4456789999999874 7899999999889988864 5899
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccCCCC-cC--CccCCCccEEEecc--ccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIMSPV-LS--RPLELGADIVMHSA--TKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~~~~-~~--~~~~~~~d~~~~s~--~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
...++++|.++|+++|+++|+|++|+.+. .. ....+ .|+.+.|| ||++ ++ | ++|+++.+++.+.+.+....
T Consensus 142 ~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~-~~~~~~s~s~~K~~-~~-g-~~g~~~~~~~~l~~~~~~~~ 217 (418)
T 2c81_A 142 SMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTI-GDIGAFSCQQGKVL-TA-G-EGGIIVTKNPRLFELIQQLR 217 (418)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSS-SSEEEEECCTTSSS-CS-S-SCEEEEESCHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHCCCEEEEECcccccCccCCEecccc-cceEEEeccCCccc-CC-C-CeEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999876 22 11122 36777777 9999 44 5 69999997665655554433
Q ss_pred HhcC------------CC--------------CChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCC
Q 021783 150 NAEG------------SG--------------LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL 203 (307)
Q Consensus 150 ~~~~------------~~--------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l 203 (307)
.... .. +....+.+....++.++...++..++.+.+.+.|+..+++. +..+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~- 295 (418)
T 2c81_A 218 ADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQELDDKNAIREKNAMFLNDALSKIDGIK-VMKRP- 295 (418)
T ss_dssp BTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEE-ECCCC-
T ss_pred HhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcc-cCCCC-
Confidence 2211 00 11222334334455666666777777778888887654331 11000
Q ss_pred CCCCchHHHhhhccCCCceEEEEeCC----HHHHHHHHhcCCcc-eee---cCCCC
Q 021783 204 PEHPGHELHYSQAKGAGSVLSFLTGS----LALSKHVVETTKYF-SIT---VSFGS 251 (307)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~-gi~---v~~g~ 251 (307)
+. .......++.+.+++ ......+.+.|..+ ||. ++.|.
T Consensus 296 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~ 342 (418)
T 2c81_A 296 PQ---------VSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPY 342 (418)
T ss_dssp TT---------EEECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCC
T ss_pred CC---------CcccccEEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccc
Confidence 00 000011355567752 22367888888888 998 87765
No 148
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.90 E-value=4.1e-22 Score=176.97 Aligned_cols=270 Identities=13% Similarity=0.069 Sum_probs=170.7
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHH
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
+++||+|+++.++|+++.. .++..|++++.++.+ |++++++++++++++|++++ ++|...++++|.+
T Consensus 107 ~~~gd~Vi~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~ 179 (437)
T 3bb8_A 107 LKPGDEVITVAAGFPTTVN----PTIQNGLIPVFVDVDIPTYNVNASLIEAAVSDKTKAIMIAH---TLGNLFDLAEVRR 179 (437)
T ss_dssp CCTTCEEEECSSSCHHHHH----HHHHTTCEEEECCEETTTTEECGGGHHHHCCTTEEEEEEEC---GGGCCCCHHHHHH
T ss_pred CCCcCEEEECCCCcHHHHH----HHHHcCCEEEEEeccCccCCcCHHHHHHhcCCCCeEEEEeC---CCCChhcHHHHHH
Confidence 7899999999999999884 445689999998864 79999999998999999875 4577789999999
Q ss_pred HHHHcCCEEEEeCccCCCCcCCccCCC--ccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcC---------
Q 021783 85 MAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG--------- 153 (307)
Q Consensus 85 ~~~~~~~~li~D~a~~~~~~~~~~~~~--~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~--------- 153 (307)
+|+++|+++|+|++|+.|...+....+ .|+++.||+|... .+|.++|+++.+++.+.........+..
T Consensus 180 l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~s~~~~k~-l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (437)
T 3bb8_A 180 VADKYNLWLIEDCCDALGSTYDGKMAGTFGDIGTVSFYPAKH-ITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCD 258 (437)
T ss_dssp HHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECSTTSS-SCCSSCEEEEESCHHHHHHHHHHHBTTBCC-------
T ss_pred HHHHcCCEEEEECccccCceECCeecccccCEEEEECcCCcC-CCCCCeEEEEeCCHHHHHHHHHHHHhCcccccccccc
Confidence 999999999999999987655444445 7899999877663 3455689999987766554433221110
Q ss_pred ------------------------------CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCC
Q 021783 154 ------------------------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL 203 (307)
Q Consensus 154 ------------------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l 203 (307)
..+....+.+....++.+....++..++.+.+.+.|+..+++. ..+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~--~~~~~ 336 (437)
T 3bb8_A 259 NTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLERIEEFVEKRKANFKYLKDALQSCADFI--ELPEA 336 (437)
T ss_dssp ---------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTTTE--ECCCC
T ss_pred cccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc--ccCCC
Confidence 0122444555555555555566666777777777777654321 11210
Q ss_pred CCCCchHHHhhhccCCCceEEEEeCCH--HHHHHHHhcCCcceeecCCCCccceeecccccC-----CCCCcHHHHHhcC
Q 021783 204 PEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMS-----HASIPVEVRQARG 276 (307)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~-----~~~~~~~~~~~~~ 276 (307)
.. . ..+ ....+.+.+... .....+.+.|..+||.++.+........|.... ...++......
T Consensus 337 ~~--~-----~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-- 405 (437)
T 3bb8_A 337 TE--N-----SDP--SWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIM-- 405 (437)
T ss_dssp CT--T-----EEC--CCSSEEEEECGGGSSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHH--
T ss_pred CC--C-----Cce--eeEEEEEEECCcCcCcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHh--
Confidence 00 0 000 111233333311 136788888888999998876422222232110 11222222222
Q ss_pred CCCCeEEEEeccCChHHHHHHHHHHHh
Q 021783 277 LTEDLVRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 277 ~~~~~iRis~~~~~~~~~i~~l~~~l~ 303 (307)
++.+|++++....++.++.+.++|+
T Consensus 406 --~~~lrl~~~~~~t~~di~~i~~~l~ 430 (437)
T 3bb8_A 406 --NQTFWIGIYPGLTHDHLDYVVSKFE 430 (437)
T ss_dssp --HHEEEECCSTTCCHHHHHHHHHHHH
T ss_pred --cCEEEecCCCCCCHHHHHHHHHHHH
Confidence 2459999987555555555554443
No 149
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.90 E-value=4.6e-22 Score=174.22 Aligned_cols=243 Identities=16% Similarity=0.101 Sum_probs=156.1
Q ss_pred HHHHhcC--CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcC--CCceEEEEeCC-CCCc
Q 021783 6 AVTHLLG--TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG--PWTKLVWVESP-TNPR 73 (307)
Q Consensus 6 ~~~~~~~--~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~--~~~~~v~~~~~-~n~t 73 (307)
++..+.. | |+|++++|+|+.+. ..++..|++++.++.. |++++++.+. +++++++++++ ||||
T Consensus 113 ~~~~l~~~~~-d~Vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPT 187 (405)
T 3k7y_A 113 LLEFLKMLNV-ETLYVTNPPYINHV----NMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPC 187 (405)
T ss_dssp HHHHHHTTTC-CEEEEESSCCHHHH----HHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTT
T ss_pred HHHHHHhcCC-CEEEEeCCCCHhHH----HHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCC
Confidence 3334555 8 99999999999888 6678899999999861 7899999886 46788888754 8999
Q ss_pred ccccc---HHHHHHHHHHcCCEEEEeCccCCCCcCC-----------ccCCCccEEEeccccccccCCCceeEEEEE--c
Q 021783 74 QQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----------PLELGADIVMHSATKFIAGHSDVMAGVLAV--K 137 (307)
Q Consensus 74 G~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~-----------~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~--~ 137 (307)
|.+++ +++|+++|++||+++|+|++|..-.... ....+..++++||||.| +.+|+|+||+++ .
T Consensus 188 G~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~l~GlRiG~~~~~~~ 266 (405)
T 3k7y_A 188 SVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNM-SLYGERAGALHIVCK 266 (405)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTS-CCTTTTEEEEEEECS
T ss_pred CCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccC-CCccccceEEEEEeC
Confidence 99996 7788999999999999999997432210 01224689999999999 778999999864 4
Q ss_pred ChhHHHHHH----HHHHhcCCCCChhhHHHHhhcccc----------HHHHHHHHHHHHHHHHHHHh----cCCCccEEe
Q 021783 138 GERLAKELY----FLQNAEGSGLAPFDCWICLRGVKT----------MALRVEKQQDNAQKIAEFLA----SHPRVKKVN 199 (307)
Q Consensus 138 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~----------~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~ 199 (307)
++.+.+.+. .......+..+...+..+...++. +....+++.++.+.+.+.|+ +...
T Consensus 267 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~----- 341 (405)
T 3k7y_A 267 NQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNL----- 341 (405)
T ss_dssp SHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTC-----
T ss_pred CHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC-----
Confidence 444433332 222222233333444443333322 12222334555556666665 3310
Q ss_pred cCCCCCCCchHHHhhhccCCCceEEE-EeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC
Q 021783 200 YAGLPEHPGHELHYSQAKGAGSVLSF-LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT 278 (307)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 278 (307)
+ ..+... ...++++.| .++. ++.+.|.++||.+.+|
T Consensus 342 -~-----~~~~~~----~p~gg~f~~~~l~~-----~~~~~L~~~gV~v~p~---------------------------- 378 (405)
T 3k7y_A 342 -N-----YDWNVY----KKQRGLFSFVPLLA-----KIAEHLKTHHIYIINN---------------------------- 378 (405)
T ss_dssp -C-----CCGGGG----SSCCSSEEECGGGG-----GGTTTTTTTTEECCTT----------------------------
T ss_pred -C-----CCCccc----cCCceEEEecCCCH-----HHHHHHHHCCEeecCC----------------------------
Confidence 0 011111 113454444 3332 3345566677866541
Q ss_pred CCeEEEEec---cCChHHHHHHHHHHHhcC
Q 021783 279 EDLVRISVG---IEDVNDLISDLDKALRTG 305 (307)
Q Consensus 279 ~~~iRis~~---~~~~~~~i~~l~~~l~~~ 305 (307)
-|||++ .++++++++.|.++++++
T Consensus 379 ---~Ris~a~~~~~~i~~~~~~i~~~~~~~ 405 (405)
T 3k7y_A 379 ---GRINVSGITKNNVDYIADKICLSLSQI 405 (405)
T ss_dssp ---SEEEGGGCCTTHHHHHHHHHHHHHHCC
T ss_pred ---CeEEEeccCHHHHHHHHHHHHHHHhhC
Confidence 289995 278899999999988753
No 150
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.90 E-value=1.1e-22 Score=178.01 Aligned_cols=239 Identities=14% Similarity=0.134 Sum_probs=156.0
Q ss_pred CCeEEEcCCCCcchHHHHhhhccc---------CCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc----HH
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPK---------TGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IR 80 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~---------~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~----~~ 80 (307)
||+|+++.++|++........... ....+..++.+|++++++.+++++++|++++++||||.+.| ++
T Consensus 127 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~ 206 (392)
T 3ruy_A 127 RAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLEALKAAITPNTAAFILEPIQGEAGINIPPAGFLK 206 (392)
T ss_dssp CCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTTCHHHHHHHCCTTEEEEEECSSBSTTTSBCCCTTHHH
T ss_pred CcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcccHHHHHHHhccCeEEEEEeCccCCCCCccCCHHHHH
Confidence 679999999997665433222111 01236677778999999999999999999999999999998 99
Q ss_pred HHHHHHHHcCCEEEEeCccC-CCCc---CCccCC--CccEEEeccccccccCCC-ceeEEEEEcChhHHHHHHHHHHhcC
Q 021783 81 KIAEMAHAHGALLLVDNSIM-SPVL---SRPLEL--GADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFLQNAEG 153 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~-~~~~---~~~~~~--~~d~~~~s~~K~~~g~~g-~~~G~~~~~~~~~~~~~~~~~~~~~ 153 (307)
+|.++|++||+++|+|++|+ .+.. ...... ..|++ ++||+++| | +++|+++++++ +.+.+........
T Consensus 207 ~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--~~SK~l~g--G~~~~G~~~~~~~-~~~~~~~~~~~~~ 281 (392)
T 3ruy_A 207 EALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMY--ILGKALGG--GVFPISCAAANRD-ILGVFEPGSHGST 281 (392)
T ss_dssp HHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT--TTSCCEEEEECHH-HHTTCCTTSSCCS
T ss_pred HHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEE--EEchhhhC--ChhhhEEEEECHH-HHhhhccCCcCCC
Confidence 99999999999999999996 2221 112222 34665 66799854 5 77999999754 4333322222233
Q ss_pred CCCChhhHHHHhhccccHH--HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHH
Q 021783 154 SGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 231 (307)
Q Consensus 154 ~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (307)
...++..+..+...++.+. ...++..++.+.+.+.+++... + .+. ..++.+++++|.+++
T Consensus 282 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~------~------~~~----~~~~~g~~~~~~~~~-- 343 (392)
T 3ruy_A 282 FGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDN------P------MIT----EVRGKGLFIGIELNE-- 343 (392)
T ss_dssp STTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCCC------T------TEE----EEEEETTEEEEEESS--
T ss_pred CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcC------C------Cce----EEEeeeeEEEEEEcc--
Confidence 3455566666666655432 2234445555566666654310 1 000 012246788888865
Q ss_pred HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHH
Q 021783 232 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKAL 302 (307)
Q Consensus 232 ~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l 302 (307)
....+.+.|..+||.+++|. ++++|++++. ++++++++.|.+++
T Consensus 344 ~~~~l~~~l~~~gi~v~~~~---------------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 344 PARPYCEQLKAAGLLCKETH---------------------------ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp CSHHHHHHHHTTTEECCCBT---------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCcEEecCC---------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 36778888888899887643 3469999765 45556666665554
No 151
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.90 E-value=8.8e-23 Score=182.01 Aligned_cols=249 Identities=12% Similarity=-0.028 Sum_probs=166.9
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHH
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA 88 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~ 88 (307)
++|++++ .|.++. ..++..|++++.+|.+ |+++|+++++++|++|++++++||||.+.|+++|.++|++
T Consensus 141 ~~vi~~~-~h~~~~----~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~ 215 (452)
T 2dgk_A 141 PNLVCGP-VQICWH----KFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDK 215 (452)
T ss_dssp CEEEESS-CCHHHH----HHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHH
T ss_pred cEEEECC-CcHHHH----HHHHHcCceEEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHH
Confidence 6999999 997777 6677889999999874 7999999999999999999999999999999999999999
Q ss_pred c------CCEEEEeCccCCCCc-------C-CccCCCccEEEeccccccccCCCceeEEEEEcChhH-HHHHHHHHHhc-
Q 021783 89 H------GALLLVDNSIMSPVL-------S-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELYFLQNAE- 152 (307)
Q Consensus 89 ~------~~~li~D~a~~~~~~-------~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~-~~~~~~~~~~~- 152 (307)
+ |+++++|++|+.+.. . +....++|++++|+||++.++.+ +|+++++++.. .+.+.....+.
T Consensus 216 ~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~--~G~~~~~~~~~~~~~~~~~~~~~~ 293 (452)
T 2dgk_A 216 FQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLG--CGWVIWRDEEALPQELVFNVDYLG 293 (452)
T ss_dssp HHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSS--CEEEEESSGGGSCGGGCEEECCTT
T ss_pred HhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCC--eEEEEEcCHHHHHHHhccCccccC
Confidence 6 999999999986532 1 11233789999999998866666 99999986532 12221000111
Q ss_pred ---------CCCC--ChhhHHHHhhc--cccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 153 ---------GSGL--APFDCWICLRG--VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 153 ---------~~~~--~~~~~~~~~~~--l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
++.. ....+|.++.. .+.+....++..++++.+.+.|++.+.+. +..+.. +...
T Consensus 294 ~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~~------------~~~~ 360 (452)
T 2dgk_A 294 GQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYE-FICTGR------------PDEG 360 (452)
T ss_dssp CCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEE-EEEECC------------TTTB
T ss_pred CCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-EecCCC------------CCCC
Confidence 0111 11233333332 23445566777778888888888765432 221210 0013
Q ss_pred CceEEEEeCCH----HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CCh
Q 021783 220 GSVLSFLTGSL----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDV 291 (307)
Q Consensus 220 ~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~ 291 (307)
.++++|.+++. .+...+.+.|...||.++.. ..|... ...+++|++++. +++
T Consensus 361 ~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~------~~~~~~--------------~~~~~lRis~~~~~t~e~i 420 (452)
T 2dgk_A 361 IPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAF------TLGGEA--------------TDIVVMRIMCRRGFEMDFA 420 (452)
T ss_dssp SSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEE------ECSTTC--------------TTCEEEEEECCTTCCHHHH
T ss_pred eEEEEEEecCcccccCCHHHHHHHHHhcCCeeeee------eCCccc--------------CCeEEEEEEecCCCCHHHH
Confidence 57888888642 12467778887788866531 111100 024579999986 566
Q ss_pred HHHHHHHHHHHh
Q 021783 292 NDLISDLDKALR 303 (307)
Q Consensus 292 ~~~i~~l~~~l~ 303 (307)
+++++.|+++++
T Consensus 421 d~li~~l~~~~~ 432 (452)
T 2dgk_A 421 ELLLEDYKASLK 432 (452)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666666666554
No 152
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.89 E-value=2.7e-22 Score=176.41 Aligned_cols=259 Identities=19% Similarity=0.158 Sum_probs=168.6
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCc--EEEEecC------CChHHHHhhcCC-CceEEEEeCCCCCccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNT------CDLDEVASAIGP-WTKLVWVESPTNPRQQ 75 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~--~~~~v~~------~d~~~l~~~l~~-~~~~v~~~~~~n~tG~ 75 (307)
.++.+++++||+|++++|+|+++.... ..++..|. .++.++. .|++++++.+++ ++++|++++|+|| .
T Consensus 100 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~ 176 (407)
T 2dkj_A 100 AVYMALMEPGDTLMGMDLAAGGHLTHG-SRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--R 176 (407)
T ss_dssp HHHHHHCCTTCEEEEECGGGTCCGGGT-CTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--S
T ss_pred HHHHHhcCCCCEEEEecccccCccchH-HHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--C
Confidence 445556899999999999998873111 33444555 4555532 378999999874 8899999889986 6
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccCCCCcC-----CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 150 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-----~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~ 150 (307)
..|+++|.++|++||+++|+|++|+.|... .... ..|++++|+||+++|+. +|+++++++.+.+.+.....
T Consensus 177 ~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~g~~---~G~~~~~~~~~~~~l~~~~~ 252 (407)
T 2dkj_A 177 FWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAHVVTSTTHKTLRGPR---GGLILSNDPELGKRIDKLIF 252 (407)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCSEEEEESSGGGCCCS---CEEEEESCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc-cccEEEEeccccCCCCC---ceEEEECCHHHHHHHHhhhc
Confidence 789999999999999999999999864321 1112 37999999999886544 79999985455555544432
Q ss_pred h-cCCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 151 A-EGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 151 ~-~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
. ..++...........+++ .+....++..++.+.+.+.|++. ++ . +..+ +..+++++
T Consensus 253 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~-------------~~~~--~~~~~~~~ 315 (407)
T 2dkj_A 253 PGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GY-R-------------IVTG--GTDNHLFL 315 (407)
T ss_dssp TTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TC-E-------------EGGG--SCSSSEEE
T ss_pred ccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-Cc-e-------------eecC--CCCceEEE
Confidence 2 222333322222223322 23444555666667777777654 21 1 1111 12467888
Q ss_pred EEeCCH-HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec--------cCChHHHH
Q 021783 225 FLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--------IEDVNDLI 295 (307)
Q Consensus 225 ~~~~~~-~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--------~~~~~~~i 295 (307)
+.++.. .....+.+.|..+||.++.|..+.... ....++++|+|++ .+++++++
T Consensus 316 ~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~-----------------~~~~~~~iRis~~~~~~~~~~~~~i~~~~ 378 (407)
T 2dkj_A 316 VDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPK-----------------PPRVTSGIRIGTPAITTRGFTPEEMPLVA 378 (407)
T ss_dssp EECGGGTCCHHHHHHHHHHTTEECEECCCTTCSS-----------------CTTTCSEEEEECHHHHHTTCCGGGHHHHH
T ss_pred EECcccCCCHHHHHHHHHHcCceecCCcCccccc-----------------cccCCCceeeecccccccCCCHHHHHHHH
Confidence 887531 136677788888899888776421000 0012567999994 37899999
Q ss_pred HHHHHHHhc
Q 021783 296 SDLDKALRT 304 (307)
Q Consensus 296 ~~l~~~l~~ 304 (307)
+.|.+++++
T Consensus 379 ~~l~~~~~~ 387 (407)
T 2dkj_A 379 ELIDRALLE 387 (407)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999888764
No 153
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.89 E-value=3.8e-23 Score=182.77 Aligned_cols=250 Identities=18% Similarity=0.162 Sum_probs=163.6
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcC
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG 90 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~ 90 (307)
++|||+|+++.|+|+.+. ..++..|++++.... |++++++.+++++++|++++|+||||.+++ + + ++ +
T Consensus 152 ~~~Gd~Vlv~~P~y~~~~----~~~~~~g~~~~~~~~-d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~-~-~---l~--~ 219 (427)
T 2hox_A 152 DAPESKVVAHAPFYPVFR----EQTKYFDKKGYVWAG-NAANYVNVSNPEQYIEMVTSPNNPEGLLRH-A-V---IK--G 219 (427)
T ss_dssp TSCCEEEEECSSCCHHHH----HHHHHSCBTTEEEEE-EGGGGTTCSCGGGEEEEEESSCTTTCCCCC-C-S---ST--T
T ss_pred CCCCCEEEEeCCCcccHH----HHHHHcCCeeeeecC-CHHHHHHhhcCCceEEEEcCCCCCcccccH-H-H---Hc--C
Confidence 889999999999998877 455667877665543 788898888888999999999999999999 3 2 33 6
Q ss_pred CEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccc
Q 021783 91 ALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 169 (307)
Q Consensus 91 ~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (307)
+..++|+++..+... .....+.+++++||||.+ |++|+|+|+++++++.+.+.+...........+...+..+...++
T Consensus 220 ~~~i~d~~~~~~~~s~~~~~~~~~i~~~S~SK~~-g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~ 298 (427)
T 2hox_A 220 CKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFT-GHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLK 298 (427)
T ss_dssp CEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHT-SCGGGCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHH
T ss_pred CCEEEeecccCCCCCccccCCCceEEEEeChhcC-CCCCceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhh
Confidence 678999887532211 111257899999999999 678999999999766676666666555444455554444444433
Q ss_pred c---------------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc----hHHHhhhccCCCceEEEEeCCH
Q 021783 170 T---------------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG----HELHYSQAKGAGSVLSFLTGSL 230 (307)
Q Consensus 170 ~---------------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 230 (307)
. +....+.+.++.+.+.+.|++.+++ ....+.. |. +... . ...+.++++.++.
T Consensus 299 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~---~~~~~~~-~~~~~~~~~~--~-p~~g~f~~~~~~~- 370 (427)
T 2hox_A 299 EVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRF---SYQELPQ-SEYCNYFRRM--R-PPSPSYAWVKCEW- 370 (427)
T ss_dssp HHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSE---ECCCCCS-CEEETTTTEE--E-CCCCSEEEEEECS-
T ss_pred cchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCc---ccccccc-cccccccccc--C-CCCceEEEEECCC-
Confidence 2 2233455566667777777765432 1110000 00 1110 1 1235677778864
Q ss_pred HHHHHHHhcC-CcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 021783 231 ALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 304 (307)
Q Consensus 231 ~~~~~~~~~l-~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 304 (307)
+ ..++.+.+ .++||.+++|..|. ..++++|||++. +++++.++.|.+.+++
T Consensus 371 ~-~~~~~~~ll~~~gI~v~pg~~f~----------------------~~~~~~Ris~~~~~e~l~~~l~~l~~~~~~ 424 (427)
T 2hox_A 371 E-EDKDCYQTFQNGRINTQNGVGFE----------------------ASSRYVRLSLIKTQDDFDQLMYYLKDMVKA 424 (427)
T ss_dssp G-GGCSHHHHHHHTTEECEEGGGGT----------------------SCTTEEEEECSSCHHHHHHHHHHHHHHHTC
T ss_pred c-HHHHHHHHHHHCCEEEcCCCccC----------------------CCCCEEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 2 33344443 46799998887632 135789999986 4566677777776643
No 154
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.89 E-value=2.1e-21 Score=167.51 Aligned_cols=244 Identities=16% Similarity=0.126 Sum_probs=155.9
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhh--cccC--CcEEEEecCC----ChHHHHh-hcCC-------CceEEEEeC
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRV--TPKT--GVVVKRVNTC----DLDEVAS-AIGP-------WTKLVWVES 68 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~--~~~~--g~~~~~v~~~----d~~~l~~-~l~~-------~~~~v~~~~ 68 (307)
.++.+++++||+|++++++|++.. .. +... |++++.+|.+ |++++++ .+++ ++++|++++
T Consensus 74 ~al~~~~~~gd~vi~~~~~~~~~~----~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~ 149 (356)
T 1v72_A 74 LCLSAMTPPWGNIYCHPASHINND----ECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQ 149 (356)
T ss_dssp HHHHTSCCTTEEEEECTTSHHHHS----STTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEES
T ss_pred HHHHHhcCCCCEEEEcCccchhhh----hchHHHHHhCCcEEEEecCCCCeEcHHHHHHHhhhcchhhccCCceEEEEEc
Confidence 455567789999999999987765 33 3444 8999999875 8999999 8875 689999999
Q ss_pred CCCCccccc---cHHHHHHHHHHcCCEEEEeCccCCC------CcCCcc--CCCccEEEeccccccccCCCceeEEEEEc
Q 021783 69 PTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSP------VLSRPL--ELGADIVMHSATKFIAGHSDVMAGVLAVK 137 (307)
Q Consensus 69 ~~n~tG~~~---~~~~l~~~~~~~~~~li~D~a~~~~------~~~~~~--~~~~d~~~~s~~K~~~g~~g~~~G~~~~~ 137 (307)
|+| ||.++ ++++|.++|++||+++|+|++|+.+ ...... ..+.|+++.|+||+ +++.| .|+++++
T Consensus 150 ~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G--~g~~~~~ 225 (356)
T 1v72_A 150 ATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAA--EAIVLFN 225 (356)
T ss_dssp SCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSC--EEEEESS
T ss_pred CCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCc--cEEEEEC
Confidence 876 99954 5899999999999999999998632 111111 13678999999999 45544 5688876
Q ss_pred ChhHHHHHHHHHHhcCCCCC--hhhHHHHhhcccc--HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 138 GERLAKELYFLQNAEGSGLA--PFDCWICLRGVKT--MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
++ +.+.+.......+.... ..........++. +....++..++.+.+.+.|++.+++. +..+
T Consensus 226 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~------------ 291 (356)
T 1v72_A 226 TS-LATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVE-VLGG------------ 291 (356)
T ss_dssp GG-GHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEE-EESC------------
T ss_pred HH-HHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcE-EccC------------
Confidence 54 44444433333332111 1111112222221 22334455666667777776543321 1111
Q ss_pred hhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----C
Q 021783 214 SQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----E 289 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~ 289 (307)
..++++++.++. .+.+.|..+||.++.|.. +++++|++++. +
T Consensus 292 ----~~~~~~~~~~~~-----~~~~~l~~~gi~v~~g~~-------------------------~~~~iRi~~~~~~~~~ 337 (356)
T 1v72_A 292 ----TEANILFCRLDS-----AMIDALLKAGFGFYHDRW-------------------------GPNVVRFVTSFATTAE 337 (356)
T ss_dssp ----CCSSEEEEEECH-----HHHHHHHHTTCBCBCSSS-------------------------STTEEEEECCTTCCHH
T ss_pred ----CCccEEEEEcCH-----HHHHHHHhcCeEEecccc-------------------------CCCeEEEEecCCCCHH
Confidence 135677777752 566666677888876542 03569999875 5
Q ss_pred ChHHHHHHHHHHHhc
Q 021783 290 DVNDLISDLDKALRT 304 (307)
Q Consensus 290 ~~~~~i~~l~~~l~~ 304 (307)
+++++++.|.+++++
T Consensus 338 ~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 338 DVDHLLNQVRLAADR 352 (356)
T ss_dssp HHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHh
Confidence 566666666665543
No 155
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.89 E-value=6e-23 Score=177.49 Aligned_cols=225 Identities=12% Similarity=0.025 Sum_probs=146.4
Q ss_pred HHHHHhcCCCC--eEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcCCCceEEEEeCCCCCc-cccc
Q 021783 5 AAVTHLLGTGE--EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVESPTNPR-QQIC 77 (307)
Q Consensus 5 ~~~~~~~~~gd--~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~~~~~~v~~~~~~n~t-G~~~ 77 (307)
.++.+++++|| +|+++++.|+..... ...+...|++++.++.+ |+++++++. +++++++++|+||+ |.++
T Consensus 77 ~al~~~~~~gd~~~vi~~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~ 153 (357)
T 3lws_A 77 VALRIWSDETDNRTVAYHPLCHLEIHEQ-DGLKELHPIETILVGAADRLMTLDEIKALP--DIACLLLELPQREIGGVAP 153 (357)
T ss_dssp HHHHHHHHHHTCCEEEECTTCHHHHSST-THHHHHSSCEEEECSCTTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCC
T ss_pred HHHHHHhhcCCCcEEEecccceeeeecc-chhhhccCcEEEEecCCCCCcCHHHHhcCc--CcceEEEEcccccCCceeC
Confidence 45556778888 788877776544310 01234458999998863 889998873 48999999999998 9887
Q ss_pred c---HHHHHHHHHHcCCEEEEeCccCC------CCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH
Q 021783 78 D---IRKIAEMAHAHGALLLVDNSIMS------PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 148 (307)
Q Consensus 78 ~---~~~l~~~~~~~~~~li~D~a~~~------~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~ 148 (307)
+ +++|.++|++||+++|+|++|.. +........+.|+++.|+||+++++. +|+++.+++ +.+.+...
T Consensus 154 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~---gg~~~~~~~-~~~~~~~~ 229 (357)
T 3lws_A 154 AFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIA---GAILAGPAA-FCQTARIW 229 (357)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSS---CEEEEECHH-HHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCc---eEEEEcCHH-HHHHHHHH
Confidence 5 89999999999999999999861 11111111347888999999997765 488887654 55555444
Q ss_pred HHhcCCCC--ChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 149 QNAEGSGL--APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 149 ~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
....+... ....+.....+++....+.++..++.+.+.+.|++.+++..... ...++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~----------------~~~~~~~~~~ 293 (357)
T 3lws_A 230 KRRYGGDLISLYPYIVSADYYYELRKDRMGQYYEQAKQLAEQFNALPGVHTTPE----------------VPVSNMFHLH 293 (357)
T ss_dssp HHHTTCCCSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTEEEESS----------------SCSSSEEEEE
T ss_pred HHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeccC----------------CCcceEEEEE
Confidence 43332221 22222333334443333445556677778888876654311001 1136678888
Q ss_pred eCCH--HHHHHHHhcCCcceeecCCCCc
Q 021783 227 TGSL--ALSKHVVETTKYFSITVSFGSV 252 (307)
Q Consensus 227 ~~~~--~~~~~~~~~l~~~gi~v~~g~~ 252 (307)
++.. .....+.+.|.++||.++.|..
T Consensus 294 ~~~~~~~~~~~~~~~l~~~Gi~v~~g~~ 321 (357)
T 3lws_A 294 FDGQAADISPKLEQVQEETGLGFVGYLV 321 (357)
T ss_dssp EESCHHHHHHHHHHHHHHHCEESCSCCE
T ss_pred ecCChHHHHHHHHHHHHhcCeEEecccc
Confidence 7542 3367788888889999998854
No 156
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.89 E-value=1.6e-21 Score=170.61 Aligned_cols=265 Identities=16% Similarity=0.152 Sum_probs=173.9
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHH
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
+++||+|+++.++|+++.. .++..|++++.++.+ |++++++.+++++++|++++ ++|...++++|.+
T Consensus 77 ~~~g~~Vi~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~ 149 (390)
T 3b8x_A 77 LKKGDEIIVPAVSWSTTYY----PLQQYGLRVKFVDIDINTLNIDIESLKEAVTDSTKAILTVN---LLGNPNNFDEINK 149 (390)
T ss_dssp CCTTCEEEEESSSCHHHHH----HHHHTTCEEEEECBCTTTCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCCHHHHHH
T ss_pred CCCcCEEEECCCCcHHHHH----HHHHcCCEEEEEecCccccCcCHHHHHHHhCcCCeEEEEEC---CccChhhHHHHHH
Confidence 7899999999999998884 455689999999875 78999999998999999873 6788899999999
Q ss_pred HHHHcCCEEEEeCccCCCCcCCccCCCc--cEEEecc--ccccccCCCceeEEEEEcChhHHHHHHHHHHhc--------
Q 021783 85 MAHAHGALLLVDNSIMSPVLSRPLELGA--DIVMHSA--TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-------- 152 (307)
Q Consensus 85 ~~~~~~~~li~D~a~~~~~~~~~~~~~~--d~~~~s~--~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~-------- 152 (307)
+|+++|+++|+|++|+.|...+...+|. |+.++|+ +|.+.++ ++|+++++++.+.+.+.......
T Consensus 150 l~~~~~~~li~D~a~~~g~~~~~~~~g~~~~~~~~s~~~~k~~~~g---~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~ 226 (390)
T 3b8x_A 150 IIGGRDIILLEDNCESMGATFNNKCAGTFGLMGTFSSFYSNHIATM---EGGCIVTDDEEIYHILLCIRAHGWTRNLPKK 226 (390)
T ss_dssp HHTTSCCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSS---SCEEEEESCHHHHHHHHHHTBTTBSTTSCSE
T ss_pred HHHHcCCEEEEECcCcccCEECCcccccccceEEEEccCCCCCccC---CceEEEeCCHHHHHHHHHHHhcCCCcccccc
Confidence 9999999999999999887655555565 5555443 3444222 36999998765555443332111
Q ss_pred ---------------------CC--CCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCch
Q 021783 153 ---------------------GS--GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH 209 (307)
Q Consensus 153 ---------------------~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~ 209 (307)
+. ......+++....++.++...++..++.+.+.+.|+..+++ .....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~~L~~~~~~---~~~~~------ 297 (390)
T 3b8x_A 227 NKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQLKKLPRFISVRRKNAEYFLDKFKDHPYL---DVQQE------ 297 (390)
T ss_dssp ETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSE---EECCC------
T ss_pred ccccccccccccccccceeccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc---ccCCC------
Confidence 11 14455666665666666666677777777888887765433 11110
Q ss_pred HHHhhhccCCCceEEEEeCC--HHHHHHHHhcCCcceeecCCCCccceeec-cccc--C---CCCCcHHHHHhcCCCCCe
Q 021783 210 ELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISM-PCFM--S---HASIPVEVRQARGLTEDL 281 (307)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~-p~~~--~---~~~~~~~~~~~~~~~~~~ 281 (307)
..+.....+.+.+++ ......+.+.|..+||.++.....+.+.. |... . ...++...... ++.
T Consensus 298 -----~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 368 (390)
T 3b8x_A 298 -----TGESSWFGFSFIIKKDSGVIRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLD----KNG 368 (390)
T ss_dssp -----CSBCCCCEEEEEECTTSCCCHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHH----HHE
T ss_pred -----CCCcccEEEEEEecCcCcccHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHh----cCE
Confidence 001112235556652 12367788888888998886322222333 3211 0 11232222221 246
Q ss_pred EEEEeccCChHHHHHHHHHHHh
Q 021783 282 VRISVGIEDVNDLISDLDKALR 303 (307)
Q Consensus 282 iRis~~~~~~~~~i~~l~~~l~ 303 (307)
+|++++....++.++.+.++|+
T Consensus 369 l~l~~~~~~t~~di~~i~~~l~ 390 (390)
T 3b8x_A 369 LFVGNHQIELFDEIDYLREVLK 390 (390)
T ss_dssp EEEECCSSCCHHHHHHHHHHTC
T ss_pred EEeeCCCCCCHHHHHHHHHhhC
Confidence 9999999888888888887763
No 157
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.89 E-value=1.5e-22 Score=181.61 Aligned_cols=255 Identities=14% Similarity=0.094 Sum_probs=161.8
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhh----hcccCC--cEEEEecC------CChHHHHhhcC-CCceEEEEeCCCC
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSR----VTPKTG--VVVKRVNT------CDLDEVASAIG-PWTKLVWVESPTN 71 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~----~~~~~g--~~~~~v~~------~d~~~l~~~l~-~~~~~v~~~~~~n 71 (307)
+++.++++|||+|++++++|+++...+.. .+...| .+++.++. .|++++++.++ ++|++|++ +++|
T Consensus 125 ~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~-~~sn 203 (483)
T 1rv3_A 125 AVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIA-GTSC 203 (483)
T ss_dssp HHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSS
T ss_pred HHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEE-eCCc
Confidence 55777899999999999999887632210 122333 45555532 38899999998 78999999 8888
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCC---CccEEEeccccccccCCCceeEEEEEcChh-------
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLEL---GADIVMHSATKFIAGHSDVMAGVLAVKGER------- 140 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~---~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~------- 140 (307)
++ .+.|+++|.++|+++|+++++|++|+.|... ..... ++|++++|+||++.|+. +|+++++++.
T Consensus 204 ~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~ 279 (483)
T 1rv3_A 204 YS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCR---AGMIFYRRGVRSVDPKT 279 (483)
T ss_dssp CC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGGGCCCS---CEEEEEECSBCC-----
T ss_pred CC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcccCCCCC---ceEEEEcchhhhhcccc
Confidence 88 8899999999999999999999999855432 22222 68999999999997765 6999998752
Q ss_pred -------HHHHHHHHH-HhcCCCCChhhHHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCC
Q 021783 141 -------LAKELYFLQ-NAEGSGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 207 (307)
Q Consensus 141 -------~~~~~~~~~-~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~ 207 (307)
+.+.+.... ....++...........++ ..+....++..++++.+.+.|++. ++ .+..+
T Consensus 280 g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~------ 351 (483)
T 1rv3_A 280 GKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GY-KIVTG------ 351 (483)
T ss_dssp --CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TC-EEGGG------
T ss_pred CcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CC-EeccC------
Confidence 222222211 1111122211111111111 234556677778888888888765 22 11111
Q ss_pred chHHHhhhccCCCceEEEEeCCH-HHHHHHHhcCCcceeecC----CCCccceeecccccCCCCCcHHHHHhcCCCCCeE
Q 021783 208 GHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVS----FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 282 (307)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~----~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i 282 (307)
.....++++.+... .+...+.+.|...||.++ +|..+. ..++++
T Consensus 352 ---------~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~----------------------~~~~~i 400 (483)
T 1rv3_A 352 ---------GSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSA----------------------LRPSGL 400 (483)
T ss_dssp ---------SCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCT----------------------TSCCEE
T ss_pred ---------CCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcC----------------------CCCceE
Confidence 00123455555321 124556666667788887 544200 125679
Q ss_pred EEEecc--------CChHHHHHHHHHHHh
Q 021783 283 RISVGI--------EDVNDLISDLDKALR 303 (307)
Q Consensus 283 Ris~~~--------~~~~~~i~~l~~~l~ 303 (307)
|||++. ++++++++.|.++++
T Consensus 401 Ris~~~~~t~g~~~edi~~~~~~l~~~l~ 429 (483)
T 1rv3_A 401 RLGTPALTSRGLLEKDFQKVAHFIHRGIE 429 (483)
T ss_dssp EEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred EeecCCcccCCCCHHHHHHHHHHHHHHHH
Confidence 999973 577777777777664
No 158
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.89 E-value=2.5e-22 Score=174.71 Aligned_cols=238 Identities=15% Similarity=0.137 Sum_probs=154.3
Q ss_pred CCC-CeEEEcCCCCcchHHHHhhhccc----CCcE-----EEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc---
Q 021783 12 GTG-EEIVAGDDLYGGTDRLLSRVTPK----TGVV-----VKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD--- 78 (307)
Q Consensus 12 ~~g-d~Vlv~~~~~~~~~~~~~~~~~~----~g~~-----~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~--- 78 (307)
+|| |+|++++|+|+.+...+...... .|.. +..++..|++++++.+++++++|++++++||||.+.+
T Consensus 114 ~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~ 193 (375)
T 2eh6_A 114 GKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNEASED 193 (375)
T ss_dssp TCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECTTCHHHHHTTCCTTEEEEEECSEETTTTSEECCHH
T ss_pred CCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCCchHHHHHHHhcCCeEEEEEeCccCCCCCcCCCHH
Confidence 788 99999999988776443222111 1222 6677778999999999989999999999999999988
Q ss_pred -HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCC--ccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh
Q 021783 79 -IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 151 (307)
Q Consensus 79 -~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~--~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~ 151 (307)
+++|.++|++||+++|+|++|+ .+... ....++ .|++ |+||+++ +|.+.|+++++++ +.+.+......
T Consensus 194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~--s~SK~~~--~g~~~G~~~~~~~-~~~~~~~~~~~ 268 (375)
T 2eh6_A 194 FLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVI--ALAKGLG--GGVPIGAILAREE-VAQSFTPGSHG 268 (375)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG--TTSCCEEEEEEHH-HHTTCCTTSCC
T ss_pred HHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEE--EEccccc--CCCCeEEEEEcHH-HHhhhcCCCCC
Confidence 9999999999999999999998 43322 123345 6766 6779995 3677999999854 33322221111
Q ss_pred cCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHH
Q 021783 152 EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 231 (307)
Q Consensus 152 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (307)
.....+...+..+...++......++..++.+.+.+.+++.+. . ..++.+.++++.++.
T Consensus 269 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~---------~----------~~~~~g~~~~~~~~~-- 327 (375)
T 2eh6_A 269 STFGGNPLACRAGTVVVDEVEKLLPHVREVGNYFKEKLKELGK---------G----------KVKGRGLMLGLELER-- 327 (375)
T ss_dssp CSSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS---------S----------EEEEETTEEEEECSS--
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------C----------CceEEEEEEEEEEcC--
Confidence 1223344555555555554443445556666666666665421 0 001246788888753
Q ss_pred HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHH
Q 021783 232 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 302 (307)
Q Consensus 232 ~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l 302 (307)
....+.+.|.++||.++.+. ++++|++++....++.++.+.+.|
T Consensus 328 ~~~~~~~~l~~~gi~~~~~~---------------------------~~~iRi~~~~~~~~~~i~~~~~~l 371 (375)
T 2eh6_A 328 ECKDYVLKALEKGLLINCTA---------------------------GKVLRFLPPLIIQKEHIDRAISVL 371 (375)
T ss_dssp CCHHHHHHHHHTTEECEEET---------------------------TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHCCCEEecCC---------------------------CCEEEEECCCCCCHHHHHHHHHHH
Confidence 14456666666788765421 456999987544444444444444
No 159
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.89 E-value=3.9e-22 Score=175.80 Aligned_cols=243 Identities=13% Similarity=0.093 Sum_probs=156.2
Q ss_pred HHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-C------ChHHHHhhcCC---CceEEEEeCCCCCccccc
Q 021783 8 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-C------DLDEVASAIGP---WTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 8 ~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~------d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~ 77 (307)
...+++||+|++++|+|+++. ..++..|++++.++. + |++++++.+++ .++++++++|+||||.++
T Consensus 118 ~~~~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~ 193 (412)
T 1yaa_A 118 FSKFFPDKLVYLSKPTWANHM----AIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDP 193 (412)
T ss_dssp HHHHCTTCCEEEEESCCTTHH----HHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCC
T ss_pred HHHhCCCCEEEEeCCCCccHH----HHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCC
Confidence 345679999999999999887 556678999998887 2 78999988863 245555699999999998
Q ss_pred c---HHHHHHHHHHcCCEEEEeCccCCCCcC----------CccC-CC---ccEEEeccccccccCCCceeEEEE--E--
Q 021783 78 D---IRKIAEMAHAHGALLLVDNSIMSPVLS----------RPLE-LG---ADIVMHSATKFIAGHSDVMAGVLA--V-- 136 (307)
Q Consensus 78 ~---~~~l~~~~~~~~~~li~D~a~~~~~~~----------~~~~-~~---~d~~~~s~~K~~~g~~g~~~G~~~--~-- 136 (307)
+ +++|.++|++||+++|+|++|+..... .... .. .+++++|+||.+ |++|+|+|+++ +
T Consensus 194 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~GlriG~~~~~~~~ 272 (412)
T 1yaa_A 194 TSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNA-GMYGERVGCFHLALTK 272 (412)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTS-CCGGGCEEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCC-CCcCCcceEEEEEecC
Confidence 5 678999999999999999999643211 1111 22 579999999999 67899999998 6
Q ss_pred --cChh----HHHHHHHHHHhcCCCCChhhHHHHhhccccH----------HHHHHHHHHHHHHHHHHHhcCCCccEEec
Q 021783 137 --KGER----LAKELYFLQNAEGSGLAPFDCWICLRGVKTM----------ALRVEKQQDNAQKIAEFLASHPRVKKVNY 200 (307)
Q Consensus 137 --~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 200 (307)
+++. +.+.+...........+...+..+...++.. +...+.+.++.+.+.+.|++..
T Consensus 273 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~------- 345 (412)
T 1yaa_A 273 QAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLG------- 345 (412)
T ss_dssp CTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------
T ss_pred CCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-------
Confidence 2343 4444443333333333445555554444332 2223344445555555555321
Q ss_pred CCCCCCCchHHHhhhccCCCceEEE-EeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCC
Q 021783 201 AGLPEHPGHELHYSQAKGAGSVLSF-LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE 279 (307)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 279 (307)
+. .++++.. + .++++.| .++ ...+...+.++||.++.
T Consensus 346 ~~----~~~~~~~--~--~~~~~~~~~~~----~~~~~~~l~~~gi~v~~------------------------------ 383 (412)
T 1yaa_A 346 TP----GNWDHIV--N--QCGMFSFTGLT----PQMVKRLEETHAVYLVA------------------------------ 383 (412)
T ss_dssp CS----SCCTHHH--H--CCSSEEECCCC----HHHHHHHHHHHCEECCT------------------------------
T ss_pred CC----CCeeeec--c--CceEEEeeCCC----HHHHHHHHHhCCEEecc------------------------------
Confidence 00 0122221 1 2334433 332 23344444567887653
Q ss_pred CeEEEEecc---CChHHHHHHHHHHHhcC
Q 021783 280 DLVRISVGI---EDVNDLISDLDKALRTG 305 (307)
Q Consensus 280 ~~iRis~~~---~~~~~~i~~l~~~l~~~ 305 (307)
++|||++. ++++++++.|.++++.+
T Consensus 384 -~~Ris~~~~~~~~i~~~~~~l~~~~~~~ 411 (412)
T 1yaa_A 384 -SGRASIAGLNQGNVEYVAKAIDEVVRFY 411 (412)
T ss_dssp -TSEEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred -CcEEEEccCCHhHHHHHHHHHHHHHHhh
Confidence 18999973 78899999999888653
No 160
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.89 E-value=2.3e-22 Score=178.70 Aligned_cols=243 Identities=11% Similarity=0.011 Sum_probs=153.3
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--C---------ChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--C---------DLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~---------d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
.++.+++++||+|+++.++|.++.. .+...|+++++++. + |++++ +.++++++++++ .|++
T Consensus 87 ~~~~a~~~~gd~Vlv~~~~h~s~~~----~~~~~G~~~~~v~~~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~ 158 (446)
T 2x3l_A 87 SVIQSFSQKKGDILMARNVHKSVLH----ALDISQQEGHFIETHQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYY 158 (446)
T ss_dssp HHHHTTTTSSSCEEECTTCCHHHHH----HHHHHTCCEEECEEEECTTTSSEEEEEC----------CCEEEEES-SCTT
T ss_pred HHHHHhcCCCCEEEEecCccHHHHH----HHHHcCCeEEEEeCeeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCC
Confidence 5666678999999999999998884 44557888888876 3 34555 457889999999 5569
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccCCCC-----cCCccCCCccEEEeccccccccCCCceeEEEEEcChhHH-HHHHH
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIMSPV-----LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYF 147 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~-~~~~~ 147 (307)
|.+.|+++|.++|++||+++|+|++|+... ..+....+.|++++|+||+++++.| +|+++++++.+. ..+..
T Consensus 159 G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~Di~~~S~~K~l~~~~g--~g~l~~~~~~i~~~~~~~ 236 (446)
T 2x3l_A 159 GETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYVVQSFHKTLPALTM--GSVLYIHKNAPYRENIIE 236 (446)
T ss_dssp SCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTCSEEEECHHHHSSSCTT--CEEEEEETTCTTHHHHHH
T ss_pred eEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcCCCEEEECCccccccccc--cEEEEEcCCcCCHHHHHH
Confidence 999999999999999999999999998621 1133455789999999998877777 899999876543 22222
Q ss_pred H-HHhcCCCCChhhHHHHhhccccHHHH-HHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEE
Q 021783 148 L-QNAEGSGLAPFDCWICLRGVKTMALR-VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 225 (307)
Q Consensus 148 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 225 (307)
. .....++.+.........+++.+... .+++.+....+.+++++. ++ .+..+ . .+..+++
T Consensus 237 ~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-g~-~~~~~---------------~-~~~~l~i 298 (446)
T 2x3l_A 237 YLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-GF-EMLQV---------------D-DPLKLLI 298 (446)
T ss_dssp HHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-TC-EEEEC---------------S-STTEEEE
T ss_pred HHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-CC-EECcC---------------C-CCeEEEE
Confidence 2 22222233322222222222222211 111344445555555443 21 11110 1 1234667
Q ss_pred EeCCHHHHHHHHhcCCcceeecC-CCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHH
Q 021783 226 LTGSLALSKHVVETTKYFSITVS-FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDK 300 (307)
Q Consensus 226 ~~~~~~~~~~~~~~l~~~gi~v~-~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~ 300 (307)
.+++.+ ...+.+.|..+||.++ .| .+++|++++. +++ ++++.|.+
T Consensus 299 ~~~~~~-~~~l~~~L~~~GI~v~~~g----------------------------~~~iRi~~~~~~t~e~i-~l~~aL~~ 348 (446)
T 2x3l_A 299 KYEGFT-GHDIQNWFMNAHIYLELAD----------------------------DYQALAILPLWHHDDTY-LFDSLLRK 348 (446)
T ss_dssp ECTTSC-HHHHHHHHHHTTEEESEEC----------------------------SSCEEEECCCCCTTCCC-CHHHHHHH
T ss_pred EeCCcC-HHHHHHHHHHCCCEEEecC----------------------------CCEEEEEeecCCCHHHH-HHHHHHHH
Confidence 665333 5667777777788776 22 2349999974 678 88999988
Q ss_pred HHhcC
Q 021783 301 ALRTG 305 (307)
Q Consensus 301 ~l~~~ 305 (307)
.++..
T Consensus 349 ~~~~~ 353 (446)
T 2x3l_A 349 IEDMI 353 (446)
T ss_dssp HHTCC
T ss_pred HHHhh
Confidence 87654
No 161
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.89 E-value=1.4e-23 Score=181.84 Aligned_cols=247 Identities=13% Similarity=0.051 Sum_probs=155.3
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC---------ChHHHHhhcCCCceEEEEeCCCCC
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---------DLDEVASAIGPWTKLVWVESPTNP 72 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---------d~~~l~~~l~~~~~~v~~~~~~n~ 72 (307)
|+ .++.++++|||+|+++++.+.+.. +...++..| +++.++.+ |.+++ .++++|++|++++++||
T Consensus 80 a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~--~i~~~t~~v~~~~~~n~ 154 (362)
T 2c0r_A 80 QFAMIPMNFLKEGQTANYVMTGSWASK--ALKEAKLIG-DTHVAASSEASNYMTLPKLQEI--QLQDNAAYLHLTSNETI 154 (362)
T ss_dssp HHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHHS-CEEEEEECGGGTTCSCCCGGGC--CCCTTEEEEEEESEETT
T ss_pred HHHHHHHhcCCCCCeEEEEecCcHhHH--HHHHHHHhC-CeEEEecccccccccCCCHHHc--ccCCCcCEEEEeCCcCc
Confidence 44 455667899999998877654432 224455668 77777642 33333 26788999999999999
Q ss_pred cccc-ccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH----
Q 021783 73 RQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY---- 146 (307)
Q Consensus 73 tG~~-~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~---- 146 (307)
||.. .|+++| +|+++++|++|+.+..+ +..+ .|++++|+||++ |++| +|+++++++.+.....
T Consensus 155 tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~~~--~d~~~~s~~K~~-g~~G--~G~l~~~~~~~~~l~~~~~~ 223 (362)
T 2c0r_A 155 EGAQFKAFPDT------GSVPLIGDMSSDILSRPFDLNQ--FGLVYAGAQKNL-GPSG--VTVVIVREDLVAESPKHLPT 223 (362)
T ss_dssp TTEECSSCCCC------TTSCEEEECTTTTTSSCCCGGG--CSEEEEETTTTT-CCSS--CEEEEEEGGGSSSCCTTSCG
T ss_pred cceeccccccc------CCCEEEEEChhhccCCccchhH--CcEEEEeccccc-cCcC--cEEEEEcHHHHhhccccCch
Confidence 9996 567766 89999999999988765 3333 489999999999 6888 8999998664322110
Q ss_pred -----HH-HH-hcCCCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 147 -----FL-QN-AEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 147 -----~~-~~-~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
.. .. ....+.+...++.+..+++. ++...+...++++.+.+.|++.+.+.....
T Consensus 224 ~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~------------- 290 (362)
T 2c0r_A 224 MLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCV------------- 290 (362)
T ss_dssp GGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESS-------------
T ss_pred HHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCC-------------
Confidence 00 01 11223444444444444432 344455556666667777765431101100
Q ss_pred hhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----C
Q 021783 214 SQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----E 289 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~ 289 (307)
++....+++++|.+++.....++.+.|...||.+..|..+ .+++|+|++. +
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~~~~g~~~-------------------------~~~iRis~~~~~~~e 345 (362)
T 2c0r_A 291 DVDSRSDMNITFRLASEELEKEFVKASEQEGFVGLKGHRS-------------------------VGGLRASIYNAVPYE 345 (362)
T ss_dssp CGGGBCSSEEEEECSCHHHHHHHHHHHHHTTEESCBCCTT-------------------------TCSEEEECCTTSCHH
T ss_pred ChHHcCCcEEEEEcCCcchHHHHHHHHHHCCCeeccCCCC-------------------------CCEEEEECCCCCCHH
Confidence 0001124677888875445778888888889977665431 2359999985 4
Q ss_pred ChHHHHHHHHHHHh
Q 021783 290 DVNDLISDLDKALR 303 (307)
Q Consensus 290 ~~~~~i~~l~~~l~ 303 (307)
+++++++.|++.++
T Consensus 346 ~i~~l~~~l~~~~~ 359 (362)
T 2c0r_A 346 SCEALVQFMEHFKR 359 (362)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 55555555555443
No 162
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.89 E-value=6e-22 Score=174.52 Aligned_cols=243 Identities=12% Similarity=0.045 Sum_probs=158.7
Q ss_pred HhcCCC-----CeEEEcCCCCcchHHHHhhhcccCCcE-EEEecC---C----ChHHHHhhcC---CCceEEEEeCCCCC
Q 021783 9 HLLGTG-----EEIVAGDDLYGGTDRLLSRVTPKTGVV-VKRVNT---C----DLDEVASAIG---PWTKLVWVESPTNP 72 (307)
Q Consensus 9 ~~~~~g-----d~Vlv~~~~~~~~~~~~~~~~~~~g~~-~~~v~~---~----d~~~l~~~l~---~~~~~v~~~~~~n~ 72 (307)
+++++| |+|++++|+|+++. ..++..|++ ++.++. + |++++++.+. ++++++++++|+||
T Consensus 120 ~~~~~g~~~~~d~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~np 195 (412)
T 1ajs_A 120 ARWYNGTNNKDTPVYVSSPTWENHN----GVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNP 195 (412)
T ss_dssp HHHSSSSSCCCSCEEEEESCCTHHH----HHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTT
T ss_pred HHhCcCcCCCCCeEEEcCCCcHHHH----HHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCC
Confidence 456899 99999999999877 556678898 888887 3 7899998886 36788889999999
Q ss_pred cccccc---HHHHHHHHHHcCCEEEEeCccCCCCcC-------Ccc----CCCccEEEeccccccccCCCceeEEEEE--
Q 021783 73 RQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-------RPL----ELGADIVMHSATKFIAGHSDVMAGVLAV-- 136 (307)
Q Consensus 73 tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~-------~~~----~~~~d~~~~s~~K~~~g~~g~~~G~~~~-- 136 (307)
||.+++ +++|.++|++||+++|+|++|...... ... ..+.+++++|+||.+ |++|+|+|++++
T Consensus 196 tG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~~~~~~ 274 (412)
T 1ajs_A 196 TGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNF-GLYNERVGNLTVVA 274 (412)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTS-CCGGGCEEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEeccccc-CCCCcceEEEEEec
Confidence 999975 678999999999999999998643221 111 124569999999999 678999999999
Q ss_pred -cChh---HHHHHHHHHHhcCCCCChhhHHHHhhccccH----------HHHHHHHHHHHHHHHHHHhcCCCccEEecCC
Q 021783 137 -KGER---LAKELYFLQNAEGSGLAPFDCWICLRGVKTM----------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAG 202 (307)
Q Consensus 137 -~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 202 (307)
+++. +.+.+...........+...+..+...++.. +...+.+.++.+.+.+.|++... +
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~------~- 347 (412)
T 1ajs_A 275 KEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKT------P- 347 (412)
T ss_dssp SSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC------S-
T ss_pred CCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC------C-
Confidence 5432 2222222222222333445555555555432 22334444555555555554310 0
Q ss_pred CCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeE
Q 021783 203 LPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 282 (307)
Q Consensus 203 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i 282 (307)
.++.+.. + ..+.+++..++ ...+...+.++||.++. .+
T Consensus 348 ----~~~~~~~--~-~~~~~~~~~~~----~~~~~~~l~~~gv~v~~-------------------------------~~ 385 (412)
T 1ajs_A 348 ----GTWNHIT--D-QIGMFSFTGLN----PKQVEYLINQKHIYLLP-------------------------------SG 385 (412)
T ss_dssp ----SCCHHHH--H-CCSSEEECCCC----HHHHHHHHHTTCEECCT-------------------------------TS
T ss_pred ----CCeeEEc--C-CCceEEEeCCC----HHHHHHHHHhCCEEecC-------------------------------Cc
Confidence 0122221 1 12333333333 33444445567887653 16
Q ss_pred EEEecc---CChHHHHHHHHHHHhcC
Q 021783 283 RISVGI---EDVNDLISDLDKALRTG 305 (307)
Q Consensus 283 Ris~~~---~~~~~~i~~l~~~l~~~ 305 (307)
|+|++. +++++.++.|.++++++
T Consensus 386 Ris~~~~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 386 RINMCGLTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp EEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred EEEeeeCCHHHHHHHHHHHHHHHHhc
Confidence 888873 89999999999998764
No 163
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.88 E-value=1.4e-22 Score=180.70 Aligned_cols=172 Identities=15% Similarity=0.148 Sum_probs=122.0
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--------CChHHHHhhc-C----CCceEEEEeCCCCCccccccH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAI-G----PWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--------~d~~~l~~~l-~----~~~~~v~~~~~~n~tG~~~~~ 79 (307)
+|++|++++++|+++. ..++..|++++.++. .|++++++++ + .++.+|++++++||||.+.|+
T Consensus 175 ~~~~vi~~~~~h~s~~----~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l 250 (456)
T 2z67_A 175 GSNVVIYPYASHKSPI----KAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDI 250 (456)
T ss_dssp CCCEEEEECCCCHHHH----HHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCH
T ss_pred CCCEEEEECCCcHHHH----HHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCH
Confidence 6788999999998877 556678999998875 2899999998 4 477788889999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCc---C-CccCC--CccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcC
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVL---S-RPLEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 153 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~---~-~~~~~--~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~ 153 (307)
++|.++|+++|+++++|+||+.... + ....+ ++|++++|+||++++|.| +|+++++++.+.+.+. ....+
T Consensus 251 ~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D~~~~s~hK~~~~p~g--~G~l~~~~~~~~~~l~--~~~~g 326 (456)
T 2z67_A 251 VEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTPIG--GGLVYSTDAEFIKEIS--LSYPG 326 (456)
T ss_dssp HHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHHHCCCSS--CEEEEESCHHHHHHHH--TTSCS
T ss_pred HHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCCCEEEEcCCCCcCCCCC--eEEEEEcCHHHHhhcC--cCCCC
Confidence 9999999999999999999875433 2 11112 799999999999877776 9999997655544331 11222
Q ss_pred CCCC--hhhHHHHhhcc--ccHHHHHHHHHHHHHHHHHHHhcC
Q 021783 154 SGLA--PFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 154 ~~~~--~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
.... ....+.....+ +.+....++..++++.+.+.|++.
T Consensus 327 ~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 369 (456)
T 2z67_A 327 RASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDL 369 (456)
T ss_dssp CBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2111 22233322222 233444556666667777776654
No 164
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.88 E-value=6.3e-22 Score=173.43 Aligned_cols=238 Identities=12% Similarity=0.054 Sum_probs=153.9
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC---C----ChHHHHhhcCC---CceEEEEeCCCCCcccccc--
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---C----DLDEVASAIGP---WTKLVWVESPTNPRQQICD-- 78 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~----d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~-- 78 (307)
+.+||+|++++|+|+++. ..++..|++++.++. + |++++++.+++ +++++++++|+||||.+++
T Consensus 117 ~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~ 192 (396)
T 2q7w_A 117 NTSVKRVWVSNPSWPNHK----SVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLE 192 (396)
T ss_dssp HSCCCEEEEEESCCTHHH----HHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHH
T ss_pred hCCCCEEEEcCCCchhHH----HHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHH
Confidence 469999999999999887 556778999999987 3 79999999873 4788888999999999985
Q ss_pred -HHHHHHHHHHcCCEEEEeCccCCCCcC------C---ccC-CCccEEEeccccccccCCCceeEEEEE--cChh----H
Q 021783 79 -IRKIAEMAHAHGALLLVDNSIMSPVLS------R---PLE-LGADIVMHSATKFIAGHSDVMAGVLAV--KGER----L 141 (307)
Q Consensus 79 -~~~l~~~~~~~~~~li~D~a~~~~~~~------~---~~~-~~~d~~~~s~~K~~~g~~g~~~G~~~~--~~~~----~ 141 (307)
+++|.++|++||+++|+|++|+..... . ... .+.+++++|+||.+ |++|+|+|++++ +++. +
T Consensus 193 ~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~~~ 271 (396)
T 2q7w_A 193 QWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNF-GLYNERVGACTLVAADSETVDRA 271 (396)
T ss_dssp HHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTT-TCGGGCCEEEEEECSSHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccc-cccccccceEEEEcCCHHHHHHH
Confidence 678999999999999999999753321 1 111 24679999999999 678999999997 3332 3
Q ss_pred HHHHHHHHHhcCCCCChhhHHHHhhccccH----------HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHH
Q 021783 142 AKELYFLQNAEGSGLAPFDCWICLRGVKTM----------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 211 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~ 211 (307)
.+.+...........+...+..+...++.. +...+.+.++.+.+.+.+++... + .++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~------~-----~~~~~ 340 (396)
T 2q7w_A 272 FSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA------N-----RDFSF 340 (396)
T ss_dssp HHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTC------C-----SCCTH
T ss_pred HHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------C-----CCcce
Confidence 222322222222233555555555555432 22233334455555555654320 0 01222
Q ss_pred HhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc---
Q 021783 212 HYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--- 288 (307)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--- 288 (307)
.. + ..+.++++.++ ...+...+..+||.++.| +|||++.
T Consensus 341 ~~--~-~~~~~~~~~~~----~~~~~~~l~~~gv~v~~~-------------------------------~Ris~~~~~~ 382 (396)
T 2q7w_A 341 II--K-QNGMFSFSGLT----KEQVLRLREEFGVYAVAS-------------------------------GRVNVAGMTP 382 (396)
T ss_dssp HH--H-CCSSEEECCCC----HHHHHHHHHHHCEECCTT-------------------------------CEEEGGGCCT
T ss_pred ec--C-CCceEEEecCC----HHHHHHHHHhcCeeecCC-------------------------------ceEEEeecCH
Confidence 21 1 12333344333 234455566678877531 7888873
Q ss_pred CChHHHHHHHHHHH
Q 021783 289 EDVNDLISDLDKAL 302 (307)
Q Consensus 289 ~~~~~~i~~l~~~l 302 (307)
+++++.++.|.+++
T Consensus 383 e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 383 DNMAPLCEAIVAVL 396 (396)
T ss_dssp TTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC
Confidence 67888888777653
No 165
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.88 E-value=1.4e-22 Score=177.72 Aligned_cols=250 Identities=13% Similarity=0.074 Sum_probs=162.2
Q ss_pred CCCCeEEEcCCCCcchHHHHh---------hhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc----
Q 021783 12 GTGEEIVAGDDLYGGTDRLLS---------RVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD---- 78 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~---------~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---- 78 (307)
.++|+|++.++.|.+...... ......+.++..++.+|++++++.+++++++|++++++|++|...+
T Consensus 122 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~~G~~~~~~~~ 201 (395)
T 3nx3_A 122 VKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVNEKTCAIILESVQGEGGINPANKDF 201 (395)
T ss_dssp CTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTTCHHHHHTTCCTTEEEEEEESEECTTSCEECCHHH
T ss_pred CCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCCCHHHHHHhccCCeEEEEEeCccCCCCcccCCHHH
Confidence 468999999999976642211 2223445678888889999999999989999999999999999876
Q ss_pred HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcCC
Q 021783 79 IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 154 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~ 154 (307)
+++|.++|++||+++|+|++|+ .+... ....++....+.|+||.+++ |+++|+++++++.+.+.+.........
T Consensus 202 l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~--G~~~G~~~~~~~~~~~~~~~~~~~~~~ 279 (395)
T 3nx3_A 202 YKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGC--GLSVGAFVINQKVASNSLEAGDHGSTY 279 (395)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGTT--TSCCEEEEECHHHHHHHSCTTCCSSCB
T ss_pred HHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEecccccC--CCceEEEEEchhhhhhhcCCcccCCCC
Confidence 9999999999999999999997 32221 22233443334578899953 788999999865414433222112223
Q ss_pred CCChhhHHHHhhccccHH--HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHH
Q 021783 155 GLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLAL 232 (307)
Q Consensus 155 ~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (307)
..++..+..+.++++.+. ...++..++.+.+.+.+++.. ..+|.+ ...++.+.++++.+.+.+.
T Consensus 280 ~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~~~~~~----~~~~~~g~~~~~~~~~~~~ 345 (395)
T 3nx3_A 280 GGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELI----------NEFDFC----KKRKGLGFMQGLSLDKSVK 345 (395)
T ss_dssp SCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH----------HHCTTE----EEEEEETTEEEEEECTTSC
T ss_pred CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH----------HhCCCe----EEEEeEEEEEEEEeCCcch
Confidence 345555666555554331 123333444444444444210 000000 0112346788888865444
Q ss_pred HHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 233 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 233 ~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
...+.+.+..+||.++.++ ++++|++++. +++++.++.|.+++++
T Consensus 346 ~~~~~~~l~~~Gi~v~~~~---------------------------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 346 VAKVIQKCQENALLLISCG---------------------------ENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp HHHHHHHHHHTTEECEEET---------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEecCC---------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 7788888888899776532 4569998765 6777777777777754
No 166
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.88 E-value=2.9e-22 Score=180.86 Aligned_cols=177 Identities=13% Similarity=0.087 Sum_probs=131.5
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCc---EEEEecCC-----ChHHHHhhcCCC------ceEEEEeCCCCCcccccc
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGV---VVKRVNTC-----DLDEVASAIGPW------TKLVWVESPTNPRQQICD 78 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~-----d~~~l~~~l~~~------~~~v~~~~~~n~tG~~~~ 78 (307)
++++|+++++.|+++. ..++..|+ +++.++.+ |+++|+++++++ +++|++++++|++|.+.|
T Consensus 191 ~~~~v~~s~~~H~s~~----~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~ 266 (511)
T 3vp6_A 191 PKLVLFTSEQSHYSIK----KAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP 266 (511)
T ss_dssp CCEEEEEETTSCTHHH----HHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC
T ss_pred CCeEEEECCCchHHHH----HHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc
Confidence 5789999999998887 55666777 88888875 899999999743 889999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcCCc-------cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH-HH
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLSRP-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QN 150 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~~~-------~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~-~~ 150 (307)
+++|+++|++||+++++|++|+.+..... ...++|++++++|||+++|.| +|+++++++......... ..
T Consensus 267 l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~ 344 (511)
T 3vp6_A 267 IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQ--CSAILVKEKGILQGCNQMHAS 344 (511)
T ss_dssp HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESSTTHHHHHHCCCCT
T ss_pred HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcC--eEEEEEeCHHHHHHHhccCCc
Confidence 99999999999999999999987765321 113579999999999988877 899999877543332110 00
Q ss_pred hc--------------------CCCCChhhHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcCCCc
Q 021783 151 AE--------------------GSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRV 195 (307)
Q Consensus 151 ~~--------------------~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~~~ 195 (307)
+. +........|..+. +.+.+..+.++..++++.+.+.+++.+++
T Consensus 345 yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~ 411 (511)
T 3vp6_A 345 YLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEF 411 (511)
T ss_dssp TTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTE
T ss_pred cccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 00 00112233444333 33456677788888999999999876543
No 167
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.88 E-value=4.1e-22 Score=172.36 Aligned_cols=241 Identities=15% Similarity=0.064 Sum_probs=154.2
Q ss_pred HHHHHhcCCCCe--EEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcCCCceEEEEeCCCCCc-cccc
Q 021783 5 AAVTHLLGTGEE--IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVESPTNPR-QQIC 77 (307)
Q Consensus 5 ~~~~~~~~~gd~--Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~~~~~~v~~~~~~n~t-G~~~ 77 (307)
.++.+++++||+ |+++.+.|..... ....+...|++++.++.+ |+++++++ .+++++|++++|+||+ |.++
T Consensus 78 ~a~~~~~~~g~~~vvi~~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~ 155 (359)
T 3pj0_A 78 IALRIWADRKENRRVAYHPLSHLEIHE-QDGLKELQQITPLLLGTANQLLTIDDIKSL-REPVSSVLIELPQREIGGQLP 155 (359)
T ss_dssp HHHHHHHHHHTCCEEEECTTCHHHHSS-TTHHHHHHCCEEEECSCTTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBCC
T ss_pred HHHHHHHhcCCCcEEEEeccceeeehh-cchHHHhcCceEEecCCcCCCcCHHHHHhc-cCCceEEEEEecccCCCcccC
Confidence 455566778887 6666665543321 001123468999998874 88999988 7889999999999998 6888
Q ss_pred cH---HHHHHHHHHcCCEEEEeCccCCCCc------CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH
Q 021783 78 DI---RKIAEMAHAHGALLLVDNSIMSPVL------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 148 (307)
Q Consensus 78 ~~---~~l~~~~~~~~~~li~D~a~~~~~~------~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~ 148 (307)
+. ++|.++|++||+++|+|++|..+.. ......+.|+++.|+||+++++. +|+++.+ +.+.+.+...
T Consensus 156 ~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~---gg~~~~~-~~l~~~~~~~ 231 (359)
T 3pj0_A 156 AFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIA---GAILAGN-DDFVQEAKIW 231 (359)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSS---CEEEEEC-HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcc---eEEEECC-HHHHHHHHHH
Confidence 74 4559999999999999999864331 11112367899999999996653 4777776 4455555544
Q ss_pred HHhcCCC--CChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 149 QNAEGSG--LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 149 ~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
....+.. .....+.....+++....+.++..++.+.+.+.|++.+++..... ...++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~----------------~~~~~~~~~~ 295 (359)
T 3pj0_A 232 KRRYGGDLISLYPYILSADYYFEKRIGKMAEYFEAAKGLAERFNSCSGVKTVPE----------------VPVSNMFHVY 295 (359)
T ss_dssp HHHTTCCCSCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHTSTTEEEESS----------------SCSSSEEEEE
T ss_pred HHHhCCCcchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCCceeecc----------------CCcceEEEEE
Confidence 3333221 122222222233433334455667777788888877654311101 1135667777
Q ss_pred eCC--HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 227 TGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 227 ~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
++. ......+.+.+.++||.+++|..+.. | +.+++|++++.
T Consensus 296 ~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~---~------------------~~~~~r~~i~~ 338 (359)
T 3pj0_A 296 FENSADEIGAILTKIQDETGVGISGYLQEKS---A------------------DVCAFEVSVGD 338 (359)
T ss_dssp ESSCHHHHHHHHHHHHHHHCEECCSCCEEEE---T------------------TEEEEEEECCT
T ss_pred ecCccchhHHHHHHHHHhcCcEecCCccccC---C------------------CceEEEEEecC
Confidence 753 23467888889889999999865321 1 24679999974
No 168
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.88 E-value=7.1e-21 Score=168.34 Aligned_cols=223 Identities=17% Similarity=0.154 Sum_probs=145.5
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCCCCcccc
Q 021783 3 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQI 76 (307)
Q Consensus 3 al~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 76 (307)
|+.+++..+.+||+|++++|+|+++. ..++..|++++.++.+ |++++++.+++++++|++++ |+|..
T Consensus 79 al~~~l~~l~~gd~Vlv~~~~~~~~~----~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~tG~~ 151 (424)
T 2po3_A 79 GLQLLAHAAGLTGEVIMPSMTFAATP----HALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGVH---LWGRP 151 (424)
T ss_dssp HHHHHHHHHTCCSEEEEESSSCTHHH----HHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTTEEEEEEEC---GGGCC
T ss_pred HHHHHHHHcCCCCEEEECCCccHHHH----HHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCcCCcEEEEEC---CCCCc
Confidence 44333333358999999999999888 4566789999999874 78999999988899999854 89999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCccCCCCcCCccCC--CccEEEeccc--cccccCCCceeEEEEEcChhHHHHHHHHHHhc
Q 021783 77 CDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLEL--GADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 152 (307)
Q Consensus 77 ~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~d~~~~s~~--K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~ 152 (307)
.++++|.++|+++|+++|+|++|+.+...+.... ..|++++||| |++++ .++|+++.+++.+.+.+.......
T Consensus 152 ~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~l~~---~~~G~~v~~~~~l~~~l~~~~~~~ 228 (424)
T 2po3_A 152 CAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNA---FEGGAVVTDDADLAARIRALHNFG 228 (424)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCC---SSCEEEEESCHHHHHHHHHHHBTT
T ss_pred CCHHHHHHHHHHcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCCccC---CCCeEEEeCCHHHHHHHHHHHhcC
Confidence 9999999999999999999999996553321111 2589999998 76643 468999998555655554443321
Q ss_pred C------------CCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC--
Q 021783 153 G------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG-- 218 (307)
Q Consensus 153 ~------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 218 (307)
. ..+++..+......++.++...++..++.+.+.+.|++.+++ ++...+..+
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~--------------~~~~~~~~~~~ 294 (424)
T 2po3_A 229 FDLPGGSPAGGTNAKMSEAAAAMGLTSLDAFPEVIDRNRRNHAAYREHLADLPGV--------------LVADHDRHGLN 294 (424)
T ss_dssp TTCTTCCTTCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCTTE--------------EECCGGGGSCC
T ss_pred ccccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc--------------cccCCCCCCcc
Confidence 1 122334444444444444444444455555555555543322 111101011
Q ss_pred CCceEEEEeCC---HHHHHHHHhcCCcceeecCC
Q 021783 219 AGSVLSFLTGS---LALSKHVVETTKYFSITVSF 249 (307)
Q Consensus 219 ~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~ 249 (307)
...++.+.+++ ......+.+.|.++||.++.
T Consensus 295 ~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~ 328 (424)
T 2po3_A 295 NHQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRA 328 (424)
T ss_dssp CCCCEEEEECHHHHSSCHHHHHHHHHHTTEECBC
T ss_pred ccEEEEEEECCccchhhHHHHHHHHHHCCCceec
Confidence 12456676652 11366777788888998875
No 169
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.88 E-value=7.8e-23 Score=176.93 Aligned_cols=244 Identities=12% Similarity=0.051 Sum_probs=155.2
Q ss_pred HHHHHhcCC---CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHh-hcCCCceEEEEeCCCCCcc
Q 021783 5 AAVTHLLGT---GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVAS-AIGPWTKLVWVESPTNPRQ 74 (307)
Q Consensus 5 ~~~~~~~~~---gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~-~l~~~~~~v~~~~~~n~tG 74 (307)
.++.+++.+ ||+|+++.++|.+. ..++..| +++.++.+ |++++++ +++++|++|++++++||||
T Consensus 82 ~~~~~l~~~~~~g~~vi~~~~~~~~~-----~~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG 155 (360)
T 1w23_A 82 MLPMNLLTKGTIGNYVLTGSWSEKAL-----KEAKLLG-ETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYG 155 (360)
T ss_dssp HHHHHHCCTTCEEEEEECSHHHHHHH-----HHHHTTS-EEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTT
T ss_pred HHHHHhcCCCCcccEEEecchhHHHH-----HHHHHhC-CeEEeecccccCcCCccchHhhccCCCCCEEEEeCCCCCcc
Confidence 345566654 67788777776542 2346678 99888753 6788888 8888999999999999999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH----
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---- 149 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~---- 149 (307)
.+++ +| +++||+++|+|++|+.+..+ +... .|++++|+||++ |++| .|+++++++.+ +.+....
T Consensus 156 ~~~~--~i---~~~~~~~li~D~a~~~~~~~~~~~~--~di~~~s~sK~~-~~~G--~G~~~~~~~~~-~~~~~~~~~~~ 224 (360)
T 1w23_A 156 TQYQ--NF---PEINHAPLIADMSSDILSRPLKVNQ--FGMIYAGAQKNL-GPSG--VTVVIVKKDLL-NTKVEQVPTML 224 (360)
T ss_dssp EECS--SC---CCCCSSCEEEECTTTTTSSCCCGGG--CSEEEEETTTTT-SCTT--CEEEEEEHHHH-CSCCTTCCGGG
T ss_pred eecc--cc---cccCCceEEEechhhcCCCCcCccc--CCEEEEEccccc-CCCC--cEEEEEcHHHH-hhcccCCcchh
Confidence 9987 33 33899999999999987654 3333 389999999999 5777 89999986543 2211110
Q ss_pred --------HhcCCCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhh
Q 021783 150 --------NAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 215 (307)
Q Consensus 150 --------~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 215 (307)
.....+.+.........+++. +....+...++++.+.+.|++.+.+... +..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-------------~~~~ 291 (360)
T 1w23_A 225 QYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVG-------------HAEK 291 (360)
T ss_dssp CHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEE-------------SSCG
T ss_pred hhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccc-------------cCCc
Confidence 011122233333333333332 3334555666677777777654321010 0000
Q ss_pred ccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CCh
Q 021783 216 AKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDV 291 (307)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~ 291 (307)
....+.++++.+++.....++.+.|...||.+..|.. .++++|+|++. +++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~-------------------------~~~~iRis~~~~~~~~~i 346 (360)
T 1w23_A 292 GSRSLMNVTFNLRNEELNQQFLAKAKEQGFVGLNGHR-------------------------SVGGCRASIYNAVPIDAC 346 (360)
T ss_dssp GGBCSSEEEEECSSHHHHHHHHHHHHHTTEESCBCCT-------------------------TTCSEEEECCTTSCHHHH
T ss_pred hhccCcEEEEEcCCCccHHHHHHHHHHCCeeeecCCC-------------------------CCCeEEEEecCCCCHHHH
Confidence 0112348888887655577888888888998866542 13569999985 445
Q ss_pred HHHHHHHHHHHh
Q 021783 292 NDLISDLDKALR 303 (307)
Q Consensus 292 ~~~i~~l~~~l~ 303 (307)
+++++.|++.++
T Consensus 347 ~~~~~~l~~~~~ 358 (360)
T 1w23_A 347 IALRELMIQFKE 358 (360)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 555555555543
No 170
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.87 E-value=2e-22 Score=176.78 Aligned_cols=240 Identities=13% Similarity=0.151 Sum_probs=155.6
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCcE------------EEEecCCChHHHHhhcCCCceEEEEeCCCCCccc-c---c
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGVV------------VKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQ-I---C 77 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~-~---~ 77 (307)
+++|+++++.|.+.... .++..|.+ ++.++.+|++++++.+++++++|++++++||||. + .
T Consensus 128 ~~~vi~~~~~yh~~~~~---~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~ 204 (397)
T 2ord_A 128 KYRILSAHNSFHGRTLG---SLTATGQPKYQKPFEPLVPGFEYFEFNNVEDLRRKMSEDVCAVFLEPIQGESGIVPATKE 204 (397)
T ss_dssp CCEEEEEBTCCCCSSHH---HHHHSBCHHHHGGGCSCCTTEEEECTTCHHHHHHHCCTTEEEEEECSEECTTTCEECCHH
T ss_pred CceEEEEcCCcCCCchh---hhhccCChhhccccCCCCCCeeEecCCCHHHHHHHhhcCeEEEEEecccCCCCcccCCHH
Confidence 57899999988665431 22334444 7788888999999999989999999999999999 4 3
Q ss_pred cHHHHHHHHHHcCCEEEEeCccCCCCcC--C---ccCCC--ccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH
Q 021783 78 DIRKIAEMAHAHGALLLVDNSIMSPVLS--R---PLELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 150 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~~~~~~~--~---~~~~~--~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~ 150 (307)
++++|.++|++||+++|+|++|+ +... . ...++ .|++ |+||+++ +|++.|+++++++.. .+.....
T Consensus 205 ~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~--s~sK~~~--~G~r~G~~~~~~~~~--~l~~~~~ 277 (397)
T 2ord_A 205 FLEEARKLCDEYDALLVFDEVQC-GMGRTGKLFAYQKYGVVPDVL--TTAKGLG--GGVPIGAVIVNERAN--VLEPGDH 277 (397)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEE--EECGGGG--TTSCCEEEEECSTTC--CCCTTSS
T ss_pred HHHHHHHHHHHcCCEEEEEeccc-CCccCccchhhhhhCCCCCee--eeccccC--CCcCeEEEEEchHhc--ccCCCCc
Confidence 69999999999999999999997 2211 1 11223 5755 7799995 578899999987643 2221111
Q ss_pred hcCCCCChhhHHHHhhccccHH--HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC
Q 021783 151 AEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 228 (307)
Q Consensus 151 ~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (307)
......++..+..+..+++.+. ...++..++.+.+.+.|++... ..+. .. ..++.+.++++.++
T Consensus 278 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~---------~~-~~~~~g~~~~~~~~ 343 (397)
T 2ord_A 278 GTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKE----EYDV---------VA-DVRGMGLMIGIQFR 343 (397)
T ss_dssp CCSSTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHH----HCTT---------EE-EEEEETTEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH----hCCc---------eE-EEEEEeEEEEEEEC
Confidence 1222344555555555543322 2344455555666666653210 0000 00 01124678888886
Q ss_pred CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 229 SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 229 ~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+.....++.+.|..+||.++.|. ++++|++++. ++++++++.|.+++++
T Consensus 344 ~~~~~~~l~~~l~~~gi~v~~~~---------------------------~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 344 EEVSNREVATKCFENKLLVVPAG---------------------------NNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp TTSCHHHHHHHHHHTTEECEEET---------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHCCCEEccCC---------------------------CCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 43336677788877888776532 3469999653 6777788888777764
No 171
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.87 E-value=2.6e-22 Score=179.91 Aligned_cols=126 Identities=21% Similarity=0.332 Sum_probs=106.8
Q ss_pred cCCCC-----eEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCcccc-ccH
Q 021783 11 LGTGE-----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQI-CDI 79 (307)
Q Consensus 11 ~~~gd-----~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~-~~~ 79 (307)
.++|| +|+++++.|+++. ..++..|++++.++.+ |+++|++++++++++|++++| ||+|.+ .++
T Consensus 148 ~~~Gd~~~r~~Vlv~~~~h~~~~----~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~~~l 222 (474)
T 1wyu_B 148 EDRGEGRTRRVVLVPDSAHGSNP----ATASMAGYQVREIPSGPEGEVDLEALKRELGPHVAALMLTNP-NTLGLFERRI 222 (474)
T ss_dssp HHTTCTTTCCEEEEETTSCTHHH----HHHHHTTCEEEEECBCTTSSBCHHHHHHHCSTTEEEEEECSS-CTTSCCCTTH
T ss_pred HhcCCccCCCEEEEeCCcChhhH----HHHHHCCCEEEEecCCCCCCcCHHHHHHhhCCCceEEEEECC-CCCcccCCCH
Confidence 45887 9999999998888 5567789999999985 899999999989999999998 589998 699
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCc-C-CccCCCccEEEeccccccccCC---CceeEEEEEcChhH
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVL-S-RPLELGADIVMHSATKFIAGHS---DVMAGVLAVKGERL 141 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~-~-~~~~~~~d~~~~s~~K~~~g~~---g~~~G~~~~~~~~~ 141 (307)
++|.++|++||+++|+|++|+.+.. . .+..++.|++++|+||++++|. |.++|+++++++..
T Consensus 223 ~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~ 289 (474)
T 1wyu_B 223 LEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLA 289 (474)
T ss_dssp HHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGG
T ss_pred HHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHH
Confidence 9999999999999999999975543 1 4445689999999999997653 35689999987643
No 172
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.87 E-value=1.4e-20 Score=164.85 Aligned_cols=226 Identities=15% Similarity=0.079 Sum_probs=156.1
Q ss_pred HH-HHHHHh-cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCC---CceEEEEeCCCCC
Q 021783 3 AL-AAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP---WTKLVWVESPTNP 72 (307)
Q Consensus 3 al-~~~~~~-~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~---~~~~v~~~~~~n~ 72 (307)
|+ .++.++ +++||+|++++|+|+++. ..++..|++++.++.+ |++++++.+++ ++++|++++ |
T Consensus 59 al~~~~~~l~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~ 131 (394)
T 1o69_A 59 ALHLALRVAGVKQDDIVLASSFTFIASV----APICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH---L 131 (394)
T ss_dssp HHHHHHHHTTCCTTCEEEEESSSCGGGT----HHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC---G
T ss_pred HHHHHHHHcCCCCCCEEEECCCccHHHH----HHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC---C
Confidence 44 455566 799999999999999998 4455689999999864 78999998875 799999875 8
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCccCCCCcCCcc---C-CCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHH
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL---E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 148 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~---~-~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~ 148 (307)
+|...++++|.++|+++|+++|+|++|+.|...... . .+.|+.++|.+|.++ +. ++|+++++++.+.+.+...
T Consensus 132 ~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~-~~--~~G~~~~~~~~l~~~l~~~ 208 (394)
T 1o69_A 132 YGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIIT-TS--GGGMLIGKNKEKIEKARFY 208 (394)
T ss_dssp GGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSC-CS--SCEEEEESCHHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCC-CC--CceEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999976543211 1 246777777799884 33 3999999766565555443
Q ss_pred HHhcCC--------------CCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhh
Q 021783 149 QNAEGS--------------GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 149 ~~~~~~--------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 214 (307)
...... ..+...+.+....++.++...++..++.+.+.+.|++. + .+ .+.. .
T Consensus 209 ~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~~L~~~--~-~~-~~~~-~--------- 274 (394)
T 1o69_A 209 STQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEY--F-SF-LDEL-E--------- 274 (394)
T ss_dssp TBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT--E-EC-CCCC-T---------
T ss_pred HHhccccCccccccccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--c-cc-cCCC-C---------
Confidence 222110 02334455544446667777777788888888888654 1 11 1110 0
Q ss_pred hccCCCceEEEEeCCH---------------------HHHHHHHhcCCcceeecCCCCc
Q 021783 215 QAKGAGSVLSFLTGSL---------------------ALSKHVVETTKYFSITVSFGSV 252 (307)
Q Consensus 215 ~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~~gi~v~~g~~ 252 (307)
.......++++.+++. .....+.+.|..+||.++.|..
T Consensus 275 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~ 333 (394)
T 1o69_A 275 NSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWK 333 (394)
T ss_dssp TEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCC
T ss_pred CCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCcccccCC
Confidence 0001122567777531 1477888889889999998864
No 173
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.87 E-value=1.5e-21 Score=171.43 Aligned_cols=260 Identities=17% Similarity=0.152 Sum_probs=163.2
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCc--EEEEecC------CChHHHHhhcCC-CceEEEEeCCCCCccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNT------CDLDEVASAIGP-WTKLVWVESPTNPRQQ 75 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~--~~~~v~~------~d~~~l~~~l~~-~~~~v~~~~~~n~tG~ 75 (307)
.++.+++++||+|++++|+|+++...+ ..+...|. +++.++. .|++++++.+++ ++++|+++ ++| .|.
T Consensus 100 ~a~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~-~~~-~~~ 176 (405)
T 2vi8_A 100 AVYFTVLEHGDTVLGMNLSHGGHLTHG-SPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAA-AAA-YPR 176 (405)
T ss_dssp HHHHHHCCTTCEEEEECGGGTCCTTTT-CTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEEC-CSS-CCS
T ss_pred HHHHHhcCCCCEEEEecccccchhccc-chhhhccceeEEEecccccccCCcCHHHHHHHHHhcCCeEEEEe-CCC-CCc
Confidence 455567899999999999998775210 01123343 7777764 388999999875 78888874 344 366
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCC---CccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLEL---GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 151 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~---~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~ 151 (307)
..++++|.++|++||+++|+|++|+.+... ..... +.|++++|+||+++|+.| |++++++ .+.+.+......
T Consensus 177 ~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~g---G~~~~~~-~~~~~l~~~~~~ 252 (405)
T 2vi8_A 177 IIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG---GMILCQE-QFAKQIDKAIFP 252 (405)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC---EEEEECH-HHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCC---eEEEEcH-HHHHHHHhhhcc
Confidence 778999999999999999999999854321 11111 578999999999976664 9999884 454444443322
Q ss_pred c-CCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEE
Q 021783 152 E-GSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 225 (307)
Q Consensus 152 ~-~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 225 (307)
. .++...........+++ .+....++..++.+.+.+.|++. ++ .+ .. +++.+.++++
T Consensus 253 ~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~-------------~~--~~~~~~~~~~ 315 (405)
T 2vi8_A 253 GIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GF-TL-------------VS--GGTDNHLLLV 315 (405)
T ss_dssp TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TC-EE-------------GG--GSCSSSEEEE
T ss_pred cccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CC-eE-------------ec--CCCCceEEEE
Confidence 2 12222322222222332 23344555566666777777654 21 11 11 1123667788
Q ss_pred EeCCH-HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec--------cCChHHHHH
Q 021783 226 LTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--------IEDVNDLIS 296 (307)
Q Consensus 226 ~~~~~-~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--------~~~~~~~i~ 296 (307)
.++.. .....+.+.|..+||.++.|.... .. . ....++++|+|++ .++++++++
T Consensus 316 ~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~------~~-~----------~~~~~~~iRis~~~~~~~~~~~~~i~~~~~ 378 (405)
T 2vi8_A 316 DLRPQQLTGKTAEKVLDEVGITVNKNTIPY------DP-E----------SPFVTSGIRIGTAAVTTRGFGLEEMDEIAA 378 (405)
T ss_dssp ECGGGTCCHHHHHHHHHHHTEECEEECCTT------CS-S----------CTTTCSEEEEECHHHHHTTCCHHHHHHHHH
T ss_pred EccCCCCCHHHHHHHHHHcCceeccCcCcc------cc-C----------CCCCCCceEEeeeeeeecCCCHHHHHHHHH
Confidence 87531 135677777877899888765310 00 0 0012467999998 378888888
Q ss_pred HHHHHHhcC
Q 021783 297 DLDKALRTG 305 (307)
Q Consensus 297 ~l~~~l~~~ 305 (307)
.|.+++++.
T Consensus 379 ~l~~~~~~~ 387 (405)
T 2vi8_A 379 IIGLVLKNV 387 (405)
T ss_dssp HHHHHHTCT
T ss_pred HHHHHHhcc
Confidence 888887654
No 174
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.87 E-value=7.7e-22 Score=172.82 Aligned_cols=120 Identities=16% Similarity=0.145 Sum_probs=97.8
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC---C----ChHHHHhhcCC---CceEEEEeCCCCCcccccc---
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---C----DLDEVASAIGP---WTKLVWVESPTNPRQQICD--- 78 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~----d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~--- 78 (307)
.+||+|+++.|+|+++. ..++..|++++.++. + |++++++.+++ +++++++++|+||||.+++
T Consensus 115 ~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~ 190 (394)
T 2ay1_A 115 NPDLRVFVSDPTWPNHV----SIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQ 190 (394)
T ss_dssp CTTCCEEEEESCCHHHH----HHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHH
T ss_pred CCCCEEEEcCCCChhHH----HHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHH
Confidence 49999999999998887 556667899998887 3 78999998863 4677888999999999986
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcC--------C-ccC-CCccEEEeccccccccCCCceeEEEEE
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLS--------R-PLE-LGADIVMHSATKFIAGHSDVMAGVLAV 136 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~--------~-~~~-~~~d~~~~s~~K~~~g~~g~~~G~~~~ 136 (307)
+++|.++|++||+++|+|++|+..... . ... .+.+++++|+||++ |++|+|+|++++
T Consensus 191 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~~~~ 257 (394)
T 2ay1_A 191 WAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNF-GIYRERTGCLLA 257 (394)
T ss_dssp HHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTT-TCGGGCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCC-cCcCCccceEEE
Confidence 668899999999999999999854321 1 111 23568899999999 668999999998
No 175
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.87 E-value=2.3e-22 Score=176.79 Aligned_cols=245 Identities=16% Similarity=0.204 Sum_probs=159.9
Q ss_pred CC-CeEEEcCCCCcchHHHHhhhc---------ccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccc-----
Q 021783 13 TG-EEIVAGDDLYGGTDRLLSRVT---------PKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC----- 77 (307)
Q Consensus 13 ~g-d~Vlv~~~~~~~~~~~~~~~~---------~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~----- 77 (307)
+| |+|++++|.|+++........ ...+..+..++.+|++++++.+++++++|+++ |+||+|.+.
T Consensus 126 ~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~-p~np~g~~~~~~~~ 204 (406)
T 4adb_A 126 SHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCAVIVE-PIQGEGGVVPASNA 204 (406)
T ss_dssp TTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHHHTTCSTTEEEEEEC-SEETTTTSEECCHH
T ss_pred CCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHHHHHhcCCeEEEEEe-CCcCCCCCccCCHH
Confidence 55 999999999988753322221 12235777888889999999999999999999 899999765
Q ss_pred cHHHHHHHHHHcCCEEEEeCccC-CCCcCC-----ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh
Q 021783 78 DIRKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 151 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~~-~~~~~~-----~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~ 151 (307)
++++|.++|++||+++|+|++|+ .+.... ......|++ |+||+++ +|+++|+++++++ +.+.+......
T Consensus 205 ~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~--~G~r~G~~~~~~~-~~~~~~~~~~~ 279 (406)
T 4adb_A 205 FLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKALG--GGFPVGALLATEE-CARVMTVGTHG 279 (406)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG--TTSCCEEEEECHH-HHHTCCTTSSC
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE--Eechhhc--CCCCeEEEEEcHH-HHhhhccCCcC
Confidence 59999999999999999999996 221111 112234655 6799995 5889999998754 43333322222
Q ss_pred cCCCCChhhHHHHhhccccH--HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC
Q 021783 152 EGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 229 (307)
Q Consensus 152 ~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (307)
.....++..+..+...++.+ ....+...++.+.+.+.++.... .++. + ...++.+.++++.+.+
T Consensus 280 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~---------~-~~~~~~g~~~~~~~~~ 345 (406)
T 4adb_A 280 TTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINH----RYGL---------F-SEVRGLGLLIGCVLNA 345 (406)
T ss_dssp CSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHH----HHCC---------E-EEEEEETTEEEEEECT
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----hCCC---------c-eEEEEEEEEEEEEEeC
Confidence 23344555555555555433 33445555566666666654310 0000 0 0112346788888865
Q ss_pred HH--HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 021783 230 LA--LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 303 (307)
Q Consensus 230 ~~--~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 303 (307)
.. ....+.+.+..+||.++.++ ++++|++++. +++++.++.|.++++
T Consensus 346 ~~~~~~~~~~~~l~~~gi~v~~~~---------------------------~~~iRi~~~~~~~~e~i~~~~~~l~~~l~ 398 (406)
T 4adb_A 346 DYAGQAKQISQEAAKAGVMVLIAG---------------------------GNVVRFAPALNVSEEEVTTGLDRFAAACE 398 (406)
T ss_dssp TTTTCHHHHHHHHHHTTEECEESS---------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHCCcEEeecC---------------------------CCeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 32 46778888888899776533 4569997754 667777777777765
Q ss_pred c
Q 021783 304 T 304 (307)
Q Consensus 304 ~ 304 (307)
+
T Consensus 399 ~ 399 (406)
T 4adb_A 399 H 399 (406)
T ss_dssp H
T ss_pred H
Confidence 3
No 176
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.87 E-value=9.7e-21 Score=166.97 Aligned_cols=260 Identities=17% Similarity=0.150 Sum_probs=158.4
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhh-hcccCCcEEEEecC-----CChHHHHhhcC-CCceEEEEeCCCCCccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSR-VTPKTGVVVKRVNT-----CDLDEVASAIG-PWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~-~~~~~g~~~~~v~~-----~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~ 77 (307)
.++.+++++||+|++++|+|+++...... .....+..++.++. .|++++++.++ +++++|++++++| |...
T Consensus 102 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~ 179 (417)
T 3n0l_A 102 GVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAY--ARVI 179 (417)
T ss_dssp HHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSC--CSCC
T ss_pred HHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCccc--CccC
Confidence 45566789999999999999776532111 11224455666665 38999999998 6899999888775 8899
Q ss_pred cHHHHHHHHHHcCCEEEEeCccCCCCc-----CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhc
Q 021783 78 DIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 152 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~ 152 (307)
++++|.++|++||+++|+|++|+.+.. +.... +.|++++|+||+++|+. +|+++++++.+.+.+.......
T Consensus 180 ~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~g~~---~G~~~~~~~~~~~~~~~~~~~~ 255 (417)
T 3n0l_A 180 DFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-YAHVVSSTTHKTLRGPR---GGIIMTNDEELAKKINSAIFPG 255 (417)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-TCSEEEEESSTTTCSCS---CEEEEESCHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-cceEEEeeCccccCCCC---eeEEEECCHHHHHHHhhhhCCc
Confidence 999999999999999999999864432 21212 57999999999995543 7999998666666555443322
Q ss_pred C-CCCChhhHHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE
Q 021783 153 G-SGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 226 (307)
Q Consensus 153 ~-~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (307)
. +............++ +.+....++..++.+.+.+.|++. ++ .+ .. ....+.++++.
T Consensus 256 ~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~-~~--------------~~~~~~~~~~~ 318 (417)
T 3n0l_A 256 IQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR-KF-KL-VS--------------DGTDNHLVLMS 318 (417)
T ss_dssp TCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TC-EE-GG--------------GSCSSSEEEEE
T ss_pred ccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-Cc-ee-cc--------------CCCCceEEEEE
Confidence 1 122221111111111 233455566667777777777752 11 11 00 01234566777
Q ss_pred eCCH-HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec--------cCChHHHHHH
Q 021783 227 TGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--------IEDVNDLISD 297 (307)
Q Consensus 227 ~~~~-~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--------~~~~~~~i~~ 297 (307)
+.+. .....+.+.|..+||.++.+........ ....+.+|+++. .++++++++.
T Consensus 319 ~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~-----------------~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~ 381 (417)
T 3n0l_A 319 FLDREFSGKDADLALGNAGITANKNTVPGEIRS-----------------PFITSGLRLGTPALTARGFKEKEMEIVSNY 381 (417)
T ss_dssp CTTSSSCHHHHHHHHHHTTEECEECCCTTCCSC-----------------TTTCSEEEEECHHHHHTTCCHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHcCeEEeccccCCCCcc-----------------cCCCCeeEecCHHHhhCCCCHHHHHHHHHH
Confidence 6422 1356666777778998875432110000 112456999985 2678888888
Q ss_pred HHHHHhc
Q 021783 298 LDKALRT 304 (307)
Q Consensus 298 l~~~l~~ 304 (307)
|.++++.
T Consensus 382 l~~~l~~ 388 (417)
T 3n0l_A 382 IADILDD 388 (417)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 8887754
No 177
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.87 E-value=1.3e-21 Score=171.40 Aligned_cols=238 Identities=16% Similarity=0.171 Sum_probs=151.9
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcE------------EEEecCCChHHHHhhcCCCceEEEEeCCCCCcccccc-
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVV------------VKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD- 78 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~- 78 (307)
.+||+|++++++|++..... +...|.+ +..++..|++++++++++++++|++++++||||.+.+
T Consensus 128 ~~~~~vi~~~~~y~~~~~~~---~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~~ 204 (395)
T 1vef_A 128 TGRKKFVAAMRGFSGRTMGS---LSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPAT 204 (395)
T ss_dssp HSCCEEEEETTCCCCSSHHH---HHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECC
T ss_pred hCCCeEEEEcCCcCCCchhh---hhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCccCCCCccCCC
Confidence 57899999999986654321 2223332 5667778999999999988999999888899999887
Q ss_pred ---HHHHHHHHHHcCCEEEEeCccC-CCCcCC-----ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH
Q 021783 79 ---IRKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 79 ---~~~l~~~~~~~~~~li~D~a~~-~~~~~~-----~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~ 149 (307)
+++|.++|++||+++|+|++|+ .+.... ....+.|++ |+||++++ |.+.|+++++++ +.+.+....
T Consensus 205 ~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~--g~~~G~~~~~~~-~~~~l~~~~ 279 (395)
T 1vef_A 205 PEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALGG--GVPLGVAVMREE-VARSMPKGG 279 (395)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGT--TSSCEEEEEEHH-HHHTSCTTS
T ss_pred HHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEcccccC--CCceEEEEehHH-HHhhhccCC
Confidence 9999999999999999999998 221111 112245755 78999953 677999999865 433322211
Q ss_pred HhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEe
Q 021783 150 NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 227 (307)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 227 (307)
.......+...+..+..+++.+.. ..+...++.+.+.+.+++... + ... ..++.+.++++.+
T Consensus 280 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~---------~~~-~~~~~g~~~~~~~ 343 (395)
T 1vef_A 280 HGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPS------P---------KIR-EVRGMGLMVGLEL 343 (395)
T ss_dssp SCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCC------T---------TEE-EEEEETTEEEEEE
T ss_pred cCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc------C---------ceE-EEEEEEEEEEEEE
Confidence 111223444555555555554332 234445555566666654321 0 000 0122467888888
Q ss_pred CCHHHHHHHHhcCC-cceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHH
Q 021783 228 GSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKAL 302 (307)
Q Consensus 228 ~~~~~~~~~~~~l~-~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l 302 (307)
++. ...+.+.|. .+||.++.+. ++++||+++. +++++.++.|.+++
T Consensus 344 ~~~--~~~l~~~l~~~~gi~v~~~~---------------------------~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 344 KEK--AAPYIARLEKEHRVLALQAG---------------------------PTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp SSC--SHHHHHHHHHHHCEECEESS---------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred cCh--HHHHHHHHHHHCCeEEecCC---------------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 641 456777776 7888776531 4569999875 45555566665544
No 178
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.87 E-value=6.4e-22 Score=178.03 Aligned_cols=241 Identities=15% Similarity=0.159 Sum_probs=161.3
Q ss_pred EEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCc------eEEEEeCCCCCccccccHHHHHHH
Q 021783 17 IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWT------KLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 17 Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~------~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
|+++.++|+++. ..++..|++++.+|.+ |+++|++++++++ .+|++++++|+||.+.|+++|.++
T Consensus 185 v~~s~~~h~s~~----~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~l 260 (486)
T 1js3_A 185 AYASDQAHSSVE----RAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPI 260 (486)
T ss_dssp EEEETTCCHHHH----HHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHH
T ss_pred EEECCCCcHHHH----HHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHH
Confidence 788999998877 6667789999999974 8999999997555 388899999999999999999999
Q ss_pred HHHcCCEEEEeCccCCCCcC--CccC-----CCccEEEeccccccccCCCceeEEEEEcChhH-HHHHH---H-HHH-hc
Q 021783 86 AHAHGALLLVDNSIMSPVLS--RPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELY---F-LQN-AE 152 (307)
Q Consensus 86 ~~~~~~~li~D~a~~~~~~~--~~~~-----~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~-~~~~~---~-~~~-~~ 152 (307)
|++||+++|+|++|+.+.+. .... .++|.+++|+||++++|.+ +|+++++++.. .+.+. . ... ..
T Consensus 261 a~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~--~G~l~~~~~~~l~~~~~~~~~yl~~~~~ 338 (486)
T 1js3_A 261 CHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFD--CSAMWVKRRTDLTGAFKLDPVYLKHSHQ 338 (486)
T ss_dssp HHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSS--CEEEEESCHHHHHGGGC-----------
T ss_pred HHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcc--eEEEEEeCHHHHHHHhcCCchhhCCCcc
Confidence 99999999999999876542 1111 2689999999999976665 99999987753 22221 0 100 00
Q ss_pred ---------------CCCCChhhHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhh
Q 021783 153 ---------------GSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 215 (307)
Q Consensus 153 ---------------~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 215 (307)
+........|.++. +.+.+....++..++++.+.+.+++.+++. +..+
T Consensus 339 ~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-------------- 403 (486)
T 1js3_A 339 GSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFE-VCAE-------------- 403 (486)
T ss_dssp -CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEE-ECSC--------------
T ss_pred cccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeCC--------------
Confidence 00112233444333 234455666777778888888887665331 1110
Q ss_pred ccCCCceEEEEeCCH-HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-----C
Q 021783 216 AKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-----E 289 (307)
Q Consensus 216 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-----~ 289 (307)
+ ..++++|.+.+. .....+.+.|...|+....+.. .+ +.+++|+++.. +
T Consensus 404 ~--~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~----------------------~~-~~~~lRi~~~~~~~t~~ 458 (486)
T 1js3_A 404 V--TLGLVCFRLKGSDGLNEALLERINSARKIHLVPCR----------------------LR-GQFVLRFAICSRKVESG 458 (486)
T ss_dssp C--CSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEE----------------------ET-TEEEEEEECCCTTCCHH
T ss_pred C--ceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEE----------------------EC-CEEEEEEEeCCCCCCHH
Confidence 1 256788888642 2246677777666653221111 00 24579999843 3
Q ss_pred ChHHHHHHHHHHHh
Q 021783 290 DVNDLISDLDKALR 303 (307)
Q Consensus 290 ~~~~~i~~l~~~l~ 303 (307)
+++++++.|.+.++
T Consensus 459 di~~~~~~l~~~~~ 472 (486)
T 1js3_A 459 HVRLAWEHIRGLAA 472 (486)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 67777777776654
No 179
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.86 E-value=1.1e-20 Score=166.89 Aligned_cols=259 Identities=15% Similarity=0.145 Sum_probs=153.1
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCC--cEEEEecCC------ChHHHHhhcC-CCceEEEEeCCCCCccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTC------DLDEVASAIG-PWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~------d~~~l~~~l~-~~~~~v~~~~~~n~tG~ 75 (307)
.++.+++++||+|++++|+|++..... ......| .+++.++.+ |++++++.+. +++++|++++++| |.
T Consensus 109 ~al~~~~~~gd~Vi~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--~~ 185 (425)
T 3ecd_A 109 AVMLALAKPGDTVLGMSLDAGGHLTHG-AKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAY--PR 185 (425)
T ss_dssp HHHHHHCCTTCEEEEECC-------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCC--CS
T ss_pred HHHHHccCCCCEEEEcccccccceecc-hhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEccccC--CC
Confidence 455667899999999999997722111 1111233 355666654 8999999997 6899999998888 46
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccCCCCc-----CCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 150 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~ 150 (307)
..++++|.++|++||+++|+|++|+.+.. ..... ..|++++|+||+++|+ ++|+++++++.+.+.+.....
T Consensus 186 ~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~g~---~~g~~~~~~~~~~~~~~~~~~ 261 (425)
T 3ecd_A 186 KLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVE-HAHVVTSTTHKTLRGP---RGGFVLTNDEEIAKKINSAVF 261 (425)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG-TCSEEEEESSGGGCCC---SCEEEEESCHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchh-cCcEEEecCCcccCCC---CcEEEEeCCHHHHHHHHhhhC
Confidence 78899999999999999999999764432 12222 3789999999999654 479999987666655544332
Q ss_pred hcC-CCCCh-hhHHHHhh---cc-ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 151 AEG-SGLAP-FDCWICLR---GV-KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 151 ~~~-~~~~~-~~~~~~~~---~l-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
... ..... .......+ .. +.+....++..++.+.+.+.|++.. + .+.. +...+.+++
T Consensus 262 ~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~--------------~~~~--~~~~~~~~~ 324 (425)
T 3ecd_A 262 PGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGG-V--------------DLVT--GGTDNHLLL 324 (425)
T ss_dssp -----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-C--------------EEGG--GSCSSSEEE
T ss_pred ccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCC-C--------------eecc--CCCCceEEE
Confidence 211 11222 11111111 11 2334455666667777777776521 1 1111 112456777
Q ss_pred EEeCC-HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec--------cCChHHHH
Q 021783 225 FLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--------IEDVNDLI 295 (307)
Q Consensus 225 ~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--------~~~~~~~i 295 (307)
+.+.+ ......+.+.+..+||.++.+....... ....++.+|++++ .+++++++
T Consensus 325 ~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~-----------------~~~~~~~iRi~~~~~~~~~~~~e~i~~~~ 387 (425)
T 3ecd_A 325 VDLRPKGLKGAQVEQALERAGITCNKNGIPFDPE-----------------KPTITSGIRLGTPAGTTRGFGAAEFREVG 387 (425)
T ss_dssp EECGGGTCCHHHHHHHHHHTTEECEECCCTTCSS-----------------CTTTCSEEEEESHHHHHTTCCHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHcCCEecccccCCCCC-----------------CCCCccceeccchhheeccCCHHHHHHHH
Confidence 77743 2235677777777899887443200000 0112467999953 25667777
Q ss_pred HHHHHHHhc
Q 021783 296 SDLDKALRT 304 (307)
Q Consensus 296 ~~l~~~l~~ 304 (307)
+.|.+++++
T Consensus 388 ~~l~~~l~~ 396 (425)
T 3ecd_A 388 RLILEVFEA 396 (425)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 777766654
No 180
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.86 E-value=8.6e-21 Score=168.46 Aligned_cols=124 Identities=23% Similarity=0.236 Sum_probs=101.6
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
.+++||+|++++++|+++...+...++..|++++.++.. |+++ ++++|++|++++| ||||.+.|+++|.++
T Consensus 146 ~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~~l~~i~~l 220 (438)
T 1wyu_A 146 RETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGRTPLPE----VGEEVGAVVVQNP-NFLGALEDLGPFAEA 220 (438)
T ss_dssp HHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTBCCCCC----CCTTEEEEEEESS-CTTSBCCCHHHHHHH
T ss_pred hcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCcCCccCHHH----hCCCeEEEEEECC-CCCeEEecHHHHHHH
Confidence 357899999999999999888877778899999999863 3443 6778999999999 999999999999999
Q ss_pred HHHcCCEEEEeCc-cCCCCcCCccCCCccEEEecccc-----ccccCCCceeEEEEEcChhH
Q 021783 86 AHAHGALLLVDNS-IMSPVLSRPLELGADIVMHSATK-----FIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 86 ~~~~~~~li~D~a-~~~~~~~~~~~~~~d~~~~s~~K-----~~~g~~g~~~G~~~~~~~~~ 141 (307)
|+++|+++++|.. ++.|....+..+++|++++|.+| +++|| + +|+++++++..
T Consensus 221 a~~~g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk~~~~~~~~Gp-~--~G~l~~~~~~~ 279 (438)
T 1wyu_A 221 AHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLPMGFGGP-H--FGFLATKKAFV 279 (438)
T ss_dssp HHHTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCCCGGGCS-C--CEEEEECGGGG
T ss_pred HHHcCCEEEEEechhhccCcCCCccCCCCEEEECCcccCCCccCCCC-C--eeEEEEcHHHH
Confidence 9999999997754 54555444456789999999666 56566 5 89999986643
No 181
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.86 E-value=1.3e-21 Score=168.71 Aligned_cols=249 Identities=17% Similarity=0.111 Sum_probs=162.8
Q ss_pred HHHHHhcCC--CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 5 AAVTHLLGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 5 ~~~~~~~~~--gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
.++..++++ ||+|++...++.+. .|...++..|..++.++.+ ++++++..++++|++|.+++.+|.||.+.
T Consensus 92 ~a~~~l~~~~~Gd~v~~~~~g~~~~--~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~ 169 (377)
T 3e77_A 92 AVPLNLIGLKAGRCADYVVTGAWSA--KAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEF 169 (377)
T ss_dssp HHHHHHGGGSTTCEEEECCCSHHHH--HHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTTCSCEEEESEETTTTEEC
T ss_pred HHHHhccCCCCCCeEEEEECCHHHH--HHHHHHHHhCCceEEeccCCCcCCCCChHHhccCCCccEEEEeCccCchheEc
Confidence 455556654 99999888777554 4567788899988877753 56777777889999999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHH-------H--HH
Q 021783 78 DIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE-------L--YF 147 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~-------~--~~ 147 (307)
|+ +|+++|+++++|++++.|..+ +..+++ ++++|.||++ ||+| .|+++++++.+.+. + ..
T Consensus 170 pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~~--~~~~s~~K~~-gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~ 239 (377)
T 3e77_A 170 DF-----IPDVKGAVLVCDMSSNFLSKPVDVSKFG--VIFAGAQKNV-GSAG--VTVVIVRDDLLGFALRECPSVLEYKV 239 (377)
T ss_dssp SS-----CCCCTTCCEEEECTTTTTSSCCCGGGCS--EEEEEGGGTT-SCTT--CEEEEEETTSCSCCCTTSCGGGCHHH
T ss_pred hh-----hhccCCCEEEEEcccccCCCCCchhhcC--EEEEeccccc-CCCc--cEEEEEcHHHHhhccCCCCchhhHHH
Confidence 98 477899999999999999988 777776 5889999999 7999 99999987653210 1 11
Q ss_pred HH-Hh-cCCCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 148 LQ-NA-EGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 148 ~~-~~-~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
.. .. ...+++....+....+++. ++...++..+.++.+.+.+++.+++. + .+. . +....
T Consensus 240 ~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~-~-~~~---~--------~~~rs 306 (377)
T 3e77_A 240 QAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFY-V-CPV---E--------PQNRS 306 (377)
T ss_dssp HHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSE-E-CCS---C--------GGGBC
T ss_pred HhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCce-e-cCC---C--------HHHcC
Confidence 11 11 1123333333333333432 33344455566666777776654331 1 110 0 00112
Q ss_pred CceEEEEeCC----HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccC----Ch
Q 021783 220 GSVLSFLTGS----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE----DV 291 (307)
Q Consensus 220 ~~~~~~~~~~----~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~----~~ 291 (307)
+.+++|.+++ .+....+++.+..+||.++.|.. ..+.+|+|+... |+
T Consensus 307 ~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~~-------------------------~~g~iRiS~~~~~t~edI 361 (377)
T 3e77_A 307 KMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHR-------------------------SVGGIRASLYNAVTIEDV 361 (377)
T ss_dssp SSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCCT-------------------------TTCSEEEECCTTSCHHHH
T ss_pred CcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCCC-------------------------cCCEEEEECCCCCCHHHH
Confidence 3468999875 22225677777778998876642 123499999864 44
Q ss_pred HHHHHHHHHHHh
Q 021783 292 NDLISDLDKALR 303 (307)
Q Consensus 292 ~~~i~~l~~~l~ 303 (307)
+.+++.|+++++
T Consensus 362 d~l~~al~~~~~ 373 (377)
T 3e77_A 362 QKLAAFMKKFLE 373 (377)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555555444
No 182
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.86 E-value=2.2e-20 Score=173.56 Aligned_cols=184 Identities=12% Similarity=0.018 Sum_probs=129.8
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhh-cccCCcEEEEecC----------CChHHH-----HhhcCCC------c-
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRV-TPKTGVVVKRVNT----------CDLDEV-----ASAIGPW------T- 61 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~-~~~~g~~~~~v~~----------~d~~~l-----~~~l~~~------~- 61 (307)
+++.+++++||+|+++.++|.++. .. ++..|+++++++. .|++++ +++++++ +
T Consensus 204 ~ai~al~~pGD~VLv~~~~H~S~~----~~~~~l~Ga~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~ 279 (730)
T 1c4k_A 204 TVTSALVSNGDLVLFDRNNHKSVY----NSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWK 279 (730)
T ss_dssp HHHHHHCCTTCEEEEETTCCHHHH----HHHTTTTCCEEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCS
T ss_pred HHHHHhcCCCCEEEEcCCchHHHH----HHHHHHCCCEEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCccccccc
Confidence 677778999999999999998887 44 6778999988864 177888 8888755 5
Q ss_pred ---eEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCCc--C-----Ccc---CCCcc----EEEeccccccc
Q 021783 62 ---KLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL--S-----RPL---ELGAD----IVMHSATKFIA 124 (307)
Q Consensus 62 ---~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~--~-----~~~---~~~~d----~~~~s~~K~~~ 124 (307)
+++++++| |++|.+.|+++|.++|+++|+++++|++|+.+.. + ... .+++| ++++|+||+++
T Consensus 280 ~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~ 358 (730)
T 1c4k_A 280 RPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQA 358 (730)
T ss_dssp CCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSS
T ss_pred CCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCC
Confidence 89999998 5899999999999999999999999999974321 1 112 33677 99999999998
Q ss_pred cCCCceeEEEEEcChhH--------HHHHHHHHHhc-CCCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHh
Q 021783 125 GHSDVMAGVLAVKGERL--------AKELYFLQNAE-GSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLA 190 (307)
Q Consensus 125 g~~g~~~G~~~~~~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~ 190 (307)
|+++ +|+++++++.+ ...+....... .++++.........+++ ....++++..++++.+++.++
T Consensus 359 g~~~--gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~ 436 (730)
T 1c4k_A 359 GFSQ--TSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLI 436 (730)
T ss_dssp CCTT--CEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC--EEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh
Confidence 8776 78888776643 12222222222 22233222211111221 234567777888888888887
Q ss_pred c-CCCc
Q 021783 191 S-HPRV 195 (307)
Q Consensus 191 ~-~~~~ 195 (307)
+ .+++
T Consensus 437 ~~i~g~ 442 (730)
T 1c4k_A 437 KAGSMF 442 (730)
T ss_dssp HTTCSS
T ss_pred hhCCCe
Confidence 7 4443
No 183
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.86 E-value=6.8e-21 Score=164.50 Aligned_cols=246 Identities=13% Similarity=0.059 Sum_probs=153.9
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcCCC-------ceEEEEeCCCCCc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPW-------TKLVWVESPTNPR 73 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~~~-------~~~v~~~~~~n~t 73 (307)
.++..++++||+|++++|+|+++... ..++..|++++.++.+ |++++++.++++ +++|+++++ |||
T Consensus 81 ~~~~~~~~~gd~vl~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~pt 157 (359)
T 1svv_A 81 IACSLALRPWEAVIATQLGHISTHET--GAIEATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNT-TEV 157 (359)
T ss_dssp HHHHHHCCTTEEEEEETTSHHHHSST--THHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTT
T ss_pred HHHHHHhCCCCEEEEcccchHHHHHH--HHHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCC
Confidence 45556788999999999999887631 1356789999999975 589999988754 899999998 789
Q ss_pred ccccc---HHHHHHHHHHcCCEEEEeCcc---CCCCcC-CccC----CCccEEEeccccccccCCCceeEEEEEcChhHH
Q 021783 74 QQICD---IRKIAEMAHAHGALLLVDNSI---MSPVLS-RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 142 (307)
Q Consensus 74 G~~~~---~~~l~~~~~~~~~~li~D~a~---~~~~~~-~~~~----~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~ 142 (307)
|.++| +++|.++|++||+++|+|++| +.+..+ .... .+.|+++.|++|+. ++.| .|+++++++..
T Consensus 158 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g-~~~~--~g~l~~~~~~~- 233 (359)
T 1svv_A 158 GTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAG-GMFG--EALIILNDALK- 233 (359)
T ss_dssp SCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTT-CSSC--EEEEECSGGGC-
T ss_pred ceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCC-CCCc--eEEEEEcccHH-
Confidence 99998 999999999999999999999 434433 2221 35799999999985 6655 79999876543
Q ss_pred HHHHHHHHhcCC--CCChhhHHHHhhccc--cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 143 KELYFLQNAEGS--GLAPFDCWICLRGVK--TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 143 ~~~~~~~~~~~~--~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
+.+.......+. .............++ .+....++..++.+.+.+.| +.+++ .-. . ..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~--------~~~------~---~~ 295 (359)
T 1svv_A 234 PNARHLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGL-EACGI--------RLA------W---PS 295 (359)
T ss_dssp TTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTC--------CBS------S---CC
T ss_pred HHHHHHHhcCCcccccchhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCe--------EEc------c---CC
Confidence 223222111221 111111111111232 23344555566666676666 32221 100 0 11
Q ss_pred CCceEEEEeCCHHHHHHHHhcCCcc-eeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHH
Q 021783 219 AGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVND 293 (307)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~ 293 (307)
.++++++.++ .++.+.|.++ ||.+ ++.. + ..++++|++++. +++++
T Consensus 296 ~~~~~~~~~~-----~~~~~~l~~~~gi~v-~~~~------~-----------------~~~~~iRi~~~~~~~~~~i~~ 346 (359)
T 1svv_A 296 ASNQLFPILE-----NTMIAELNNDFDMYT-VEPL------K-----------------DGTCIMRLCTSWATEEKECHR 346 (359)
T ss_dssp SSSEECBEEE-----HHHHHHHTTTEECEE-EEEE------T-----------------TTEEEEEEECCTTCCHHHHHH
T ss_pred ccceEEEEcC-----HHHHHHHHHhcCEEE-Eecc------c-----------------CCCceEEEEccCcCCHHHHHH
Confidence 2445555554 3566777777 8877 2110 0 124579999875 45666
Q ss_pred HHHHHHHHHhc
Q 021783 294 LISDLDKALRT 304 (307)
Q Consensus 294 ~i~~l~~~l~~ 304 (307)
.++.|.+++++
T Consensus 347 ~~~~l~~~~~~ 357 (359)
T 1svv_A 347 FVEVLKRLVAS 357 (359)
T ss_dssp HHHHHHHC---
T ss_pred HHHHHHHHHhc
Confidence 66666665544
No 184
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.85 E-value=6.1e-21 Score=168.50 Aligned_cols=246 Identities=14% Similarity=0.171 Sum_probs=155.0
Q ss_pred CC-CeEEEcCCCCcchHHHHhhhcc---------cCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCcccc----cc
Q 021783 13 TG-EEIVAGDDLYGGTDRLLSRVTP---------KTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI----CD 78 (307)
Q Consensus 13 ~g-d~Vlv~~~~~~~~~~~~~~~~~---------~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~----~~ 78 (307)
+| ++|+++++.|.+.......... .....+..++.+|++++++.+++++++|++++++|++|.. .+
T Consensus 144 ~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~le~~i~~~~~~vi~~p~~~~gG~~~~~~~~ 223 (420)
T 2pb2_A 144 PFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVQAATPEF 223 (420)
T ss_dssp TTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHH
T ss_pred CCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCCCHHHHHHHhccCceEEEEeCCcCCCCeecCCHHH
Confidence 67 5999999999776432211111 1112367778889999999999899999999999988862 36
Q ss_pred HHHHHHHHHHcCCEEEEeCccCC-CCcCCc-----cCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhc
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMS-PVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 152 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~-~~~~~~-----~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~ 152 (307)
+++|.++|++||+++|+|++|.. +..... .....|++ |++|+++ +|+++|+++++++ +.+.+.......
T Consensus 224 l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii--t~sK~l~--~G~~iG~~~~~~~-l~~~l~~~~~~~ 298 (420)
T 2pb2_A 224 LKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL--TSAKALG--GGFPVSAMLTTQE-IASAFHVGSHGS 298 (420)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG--TTSCCEEEEECHH-HHTTCC----CC
T ss_pred HHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE--Eeccccc--CCCceEEEEEhHH-HHHhhcCCCcCc
Confidence 99999999999999999999952 111111 12235766 6899995 5788999999855 443332221222
Q ss_pred CCCCChhhHHHHhhccccH--HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH
Q 021783 153 GSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 230 (307)
Q Consensus 153 ~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (307)
....++..+..+...++.+ ....++..++.+.+.+.|++... .++.+. ..++.+.++++.+...
T Consensus 299 t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~----------~~~~~g~~~~v~~~~~ 364 (420)
T 2pb2_A 299 TYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDE----QFDIFS----------DIRGMGLLIGAELKPK 364 (420)
T ss_dssp EECCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHH----HHCCEE----------EEEEETTEEEEEECGG
T ss_pred ccCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh----cCCCeE----------EEEecceEEEEEECCC
Confidence 2234555566555555433 23344445555555555543210 001000 0122467888888643
Q ss_pred H--HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 231 A--LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 231 ~--~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
. ....+.+.|..+||.++++. ++++|++++. +++++.++.|.+++++
T Consensus 365 ~~~~~~~l~~~l~~~Gi~v~~~~---------------------------~~~iRl~~~~~~t~eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 365 YKGRARDFLYAGAEAGVMVLNAG---------------------------ADVMRFAPSLVVEEADIHEGMQRFAQAVGK 417 (420)
T ss_dssp GTTCHHHHHHHHHHTTEECEESS---------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCEEEeCC---------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 2 36778888877898776532 3459999754 6778888888877754
No 185
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.85 E-value=2.2e-21 Score=175.32 Aligned_cols=121 Identities=14% Similarity=0.050 Sum_probs=99.9
Q ss_pred C-eEEEcCCCCcchHHHHhhhcccCCc---EEEEecCC-----ChHHHHhhcCC------CceEEEEeCCCCCccccccH
Q 021783 15 E-EIVAGDDLYGGTDRLLSRVTPKTGV---VVKRVNTC-----DLDEVASAIGP------WTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 15 d-~Vlv~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~-----d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~~ 79 (307)
+ +|++++++|+++...+ +..|. +++.+|.+ |+++|++++++ ++++|++++++|+||.+.|+
T Consensus 189 ~~~v~~s~~~h~s~~~~~----~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l 264 (504)
T 2okj_A 189 KLVLFTSEQSHYSIKKAG----AALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPI 264 (504)
T ss_dssp CEEEEEETTSCTHHHHHH----HHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCH
T ss_pred CeEEEECCcchHHHHHHH----HHcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCH
Confidence 6 7999999999887443 33444 88888875 89999999874 58999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCC------ccC-CCccEEEeccccccccCCCceeEEEEEcChhH
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSR------PLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~------~~~-~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
++|.++|++||+++|+|++|+.+.... ... .++|+++.|+||++++|.+ +|+++++++.+
T Consensus 265 ~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~--~g~l~~~~~~~ 331 (504)
T 2okj_A 265 QEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQ--CSAILVKEKGI 331 (504)
T ss_dssp HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESSTTH
T ss_pred HHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcc--eEEEEEECHHH
Confidence 999999999999999999998665431 111 2689999999999977766 99999987544
No 186
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.85 E-value=2.3e-21 Score=173.53 Aligned_cols=246 Identities=13% Similarity=0.112 Sum_probs=164.6
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhhcCCC------ceEEEEeCCCCCccccccHHHH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPW------TKLVWVESPTNPRQQICDIRKI 82 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~l~~~------~~~v~~~~~~n~tG~~~~~~~l 82 (307)
++++|+++..+|.+.. ..++..|++++.+|.+ |+++|+++++++ +.+|++++++|++|.+.|+++|
T Consensus 181 ~~~~vi~s~~~H~s~~----~~~~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I 256 (475)
T 3k40_A 181 GKLVGYCSDQAHSSVE----RAGLLGGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDEC 256 (475)
T ss_dssp HHEEEEEETTSCHHHH----HHHHHHTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHH
T ss_pred CCeEEEECCCchHHHH----HHHHHcCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHH
Confidence 4578999999998887 5566789999999984 899999998743 6788889999999999999999
Q ss_pred HHHHHHcCCEEEEeCccCCCCcCCc--c--CC---CccEEEeccccccccCCCceeEEEEEcChhH-HHHHHHHHHhc--
Q 021783 83 AEMAHAHGALLLVDNSIMSPVLSRP--L--EL---GADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELYFLQNAE-- 152 (307)
Q Consensus 83 ~~~~~~~~~~li~D~a~~~~~~~~~--~--~~---~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~-~~~~~~~~~~~-- 152 (307)
.++|++||+++++|++|+.+..... . .. .+|.+++|+||++++|.| +|+++++++.. .+.+.....+.
T Consensus 257 ~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g--~g~l~~~~~~~l~~~~~~~~~yl~~ 334 (475)
T 3k40_A 257 GPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFD--CSAMWLKDPSWVVNAFNVDPLYLKH 334 (475)
T ss_dssp HHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS--CEEEEESSGGGC-------------
T ss_pred HHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCc--eEEEEEeCHHHHHHHhcCCccccCC
Confidence 9999999999999999987643211 1 11 369999999999988888 89999987654 22211100000
Q ss_pred ---------------CC-CCChhhHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhh
Q 021783 153 ---------------GS-GLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 153 ---------------~~-~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 214 (307)
.+ .......|..+. +.+.+....++..++++.+.+.+++.+++. +..+
T Consensus 335 ~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~-l~~~------------- 400 (475)
T 3k40_A 335 DMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFE-LAAE------------- 400 (475)
T ss_dssp --------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEE-ESSC-------------
T ss_pred CcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEE-EecC-------------
Confidence 00 011223333332 234556667777888888888888765431 1111
Q ss_pred hccCCCceEEEEeCC-HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-----
Q 021783 215 QAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----- 288 (307)
Q Consensus 215 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----- 288 (307)
...++++|.+.+ .....++.+.+...|..... |... .+..++|+++..
T Consensus 401 ---~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~---------~~~~--------------~g~~~lR~~~~~~~tt~ 454 (475)
T 3k40_A 401 ---INMGLVCFRLKGSNERNEALLKRINGRGHIHLV---------PAKI--------------KDVYFLRMAICSRFTQS 454 (475)
T ss_dssp ---CBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCE---------EEEE--------------TTEEEEEEECCCTTCCH
T ss_pred ---CceEEEEEEeCCchHHHHHHHHHHHhCCcEEEE---------eeEE--------------CCEEEEEEEeCCCCCCH
Confidence 135788888853 34467777877766543211 1000 024569999863
Q ss_pred CChHHHHHHHHHHHhc
Q 021783 289 EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 ~~~~~~i~~l~~~l~~ 304 (307)
+|++++++.|++..++
T Consensus 455 ~di~~~~~~i~~~~~~ 470 (475)
T 3k40_A 455 EDMEYSWKEVSAAADE 470 (475)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4677777777666543
No 187
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.85 E-value=3.8e-21 Score=173.39 Aligned_cols=246 Identities=15% Similarity=0.145 Sum_probs=158.2
Q ss_pred CC-eEEEcCCCCcchHHHHhhhcccCCc---EEEEecCC-----ChHHHHhhcCCC----ce--EEEEeCCCCCcccccc
Q 021783 14 GE-EIVAGDDLYGGTDRLLSRVTPKTGV---VVKRVNTC-----DLDEVASAIGPW----TK--LVWVESPTNPRQQICD 78 (307)
Q Consensus 14 gd-~Vlv~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~-----d~~~l~~~l~~~----~~--~v~~~~~~n~tG~~~~ 78 (307)
|| +|+++.++|+++... ++..|. +++.+|.+ |+++|+++++++ ++ +|++++++|+||.+.|
T Consensus 201 g~~~v~~s~~~h~s~~~~----~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~ 276 (497)
T 2qma_A 201 DKLRIVCSKKSHFTVQKS----ASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDD 276 (497)
T ss_dssp GGEEEEEETTSCTHHHHH----HHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC
T ss_pred CCeEEEECCCchHHHHHH----HHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCC
Confidence 46 899999999888744 344443 78888875 899999988632 44 8888899999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCccCCCCcC-C----ccCC-CccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHh-
Q 021783 79 IRKIAEMAHAHGALLLVDNSIMSPVLS-R----PLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA- 151 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a~~~~~~~-~----~~~~-~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~- 151 (307)
+++|.++|++||+++|+|++|+.+... . .... ++|+++.|+||++++|.+ +|+++++++...+.+.....+
T Consensus 277 l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~--~G~l~~~~~~~~~~~~~~~~yl 354 (497)
T 2qma_A 277 LDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTIS--CGALLVNDKSNFKFLLHHADYL 354 (497)
T ss_dssp HHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSS--CEEEEESCGGGGGGGCC-----
T ss_pred HHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcc--eEEEEEeCHHHHHHhcCCchhc
Confidence 999999999999999999999876653 2 1122 679999999999987766 899999876532222100000
Q ss_pred --c----CC----------CCChhhHHHHhhcc--ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 152 --E----GS----------GLAPFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 152 --~----~~----------~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
. .. .......|..+..+ +.+....++..++++.+.+.+++.+++ .+..+
T Consensus 355 ~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~-~~~~~------------ 421 (497)
T 2qma_A 355 NREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQF-ELLAE------------ 421 (497)
T ss_dssp ---------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTE-EECSC------------
T ss_pred CCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCe-EEEcC------------
Confidence 0 00 00112233333322 344556667777888888888765433 11111
Q ss_pred hhccCCCceEEEEeCCH-----HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe-c
Q 021783 214 SQAKGAGSVLSFLTGSL-----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-G 287 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~ 287 (307)
+ ..++++|.+.+. +....+.+.+...|+.+..+.. . .+++++|+++ +
T Consensus 422 --~--~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~----------------------~-~g~~~lRis~~~ 474 (497)
T 2qma_A 422 --P--SLSTVLFRATHETADLDELNKALRLEALTRGIAVLGETI----------------------V-DGKTALKFTILN 474 (497)
T ss_dssp --C--SSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEE----------------------E-TTEEEEEEECCC
T ss_pred --C--CceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeE----------------------E-CCEEEEEEEecC
Confidence 1 356888887542 1134555666666664432111 0 0235799998 4
Q ss_pred c----CChHHHHHHHHHHHhcC
Q 021783 288 I----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 288 ~----~~~~~~i~~l~~~l~~~ 305 (307)
. ++++++++.|.++++++
T Consensus 475 ~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 475 PCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHhh
Confidence 3 66777777777766553
No 188
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.85 E-value=3.6e-21 Score=172.67 Aligned_cols=246 Identities=14% Similarity=0.132 Sum_probs=167.3
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcCCC------ceEEEEeCCCCCccccccHHH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPW------TKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~------~~~v~~~~~~n~tG~~~~~~~ 81 (307)
++++|++++.+|.++. ..++..|++++.+|.+ |+++|+++++++ +.+|++++++|++|.+.|+++
T Consensus 187 ~~~~v~~s~~~H~s~~----~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~ 262 (481)
T 4e1o_A 187 ARLVAYASDQAHSSVE----KAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSE 262 (481)
T ss_dssp TTEEEEEETTSCHHHH----HHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHH
T ss_pred CCeEEEEcCcchHHHH----HHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHH
Confidence 6789999999998887 4456679999999975 899999999732 678888899999999999999
Q ss_pred HHHHHHHcCCEEEEeCccCCCCcCC----ccCCC---ccEEEeccccccccCCCceeEEEEEcChhHHHH-HHHHHHhc-
Q 021783 82 IAEMAHAHGALLLVDNSIMSPVLSR----PLELG---ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE-LYFLQNAE- 152 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~~~~~~~~----~~~~~---~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~-~~~~~~~~- 152 (307)
|+++|++||+++++|++|+.+.... ....| +|.++.++||++++|.| +|+++++++..... +.....+.
T Consensus 263 I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g--~g~l~~~~~~~l~~~~~~~~~yl~ 340 (481)
T 4e1o_A 263 LGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFD--CTGFWVKDKYKLQQTFSVNPIYLR 340 (481)
T ss_dssp HHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS--CEEEEESBHHHHHTTTCCCCGGGC
T ss_pred HHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCc--eEEEEEeCHHHHHHHhcCCchhcc
Confidence 9999999999999999998664321 11123 59999999999999988 89999987754321 10000000
Q ss_pred -----------------CCCCChhhHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 153 -----------------GSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 153 -----------------~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
+........|..+. +.+.+....++..++++.+.+.+++.+++. +..
T Consensus 341 ~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~--------------~~~ 406 (481)
T 4e1o_A 341 HANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFE--------------IPA 406 (481)
T ss_dssp CTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEE--------------CCS
T ss_pred CcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE--------------Eec
Confidence 00112233444333 334556677778888888888888765431 110
Q ss_pred hhccCCCceEEEEeCC-HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----
Q 021783 214 SQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---- 288 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---- 288 (307)
....++++|.+.+ ......+.+.+...|+....+.. . .+..++|+++..
T Consensus 407 ---~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~---------~--------------~g~~~lR~~~~~~~tt 460 (481)
T 4e1o_A 407 ---KRHLGLVVFRLKGPNSLTENVLKEIAKAGRLFLIPAT---------I--------------QDKLIIRFTVTSQFTT 460 (481)
T ss_dssp ---CCCSSEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEE---------E--------------TTEEEEEEECCCTTCC
T ss_pred ---CCceeEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeE---------E--------------CCEEEEEEEeCCCCCC
Confidence 1135788898853 34467788887776642211110 0 023569999763
Q ss_pred -CChHHHHHHHHHHHhc
Q 021783 289 -EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 -~~~~~~i~~l~~~l~~ 304 (307)
+|++++++.|++.+++
T Consensus 461 ~~di~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 461 RDDILRDWNLIRDAATL 477 (481)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 4667777777666543
No 189
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.85 E-value=1.2e-20 Score=166.92 Aligned_cols=253 Identities=13% Similarity=0.137 Sum_probs=152.7
Q ss_pred HhcCCCCeEEEcCCCCcchHHHHhhhcc-------cCCc---EEEEecCC----------ChHHHHhhcC-----CCceE
Q 021783 9 HLLGTGEEIVAGDDLYGGTDRLLSRVTP-------KTGV---VVKRVNTC----------DLDEVASAIG-----PWTKL 63 (307)
Q Consensus 9 ~~~~~gd~Vlv~~~~~~~~~~~~~~~~~-------~~g~---~~~~v~~~----------d~~~l~~~l~-----~~~~~ 63 (307)
++.++| +|++.+|.|++.......... .++. .++.++.+ |++++++.++ +++++
T Consensus 124 ~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 202 (426)
T 1sff_A 124 AATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAA 202 (426)
T ss_dssp HHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred HhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEE
Confidence 456776 899999999776532212211 1111 25555542 6788988885 46788
Q ss_pred EEEeC-CCCCcccccc----HHHHHHHHHHcCCEEEEeCccCC-CCcC---CccCCCccEEEeccccccccCCCceeEEE
Q 021783 64 VWVES-PTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS---RPLELGADIVMHSATKFIAGHSDVMAGVL 134 (307)
Q Consensus 64 v~~~~-~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~-~~~~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~ 134 (307)
|++++ ++| ||...+ +++|.++|++||+++|+|++|+. +... .....+.+..+.|+||++ ++ |+|+|++
T Consensus 203 v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~-~~-GlriG~~ 279 (426)
T 1sff_A 203 IVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSI-AG-GFPLAGV 279 (426)
T ss_dssp EEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGG-GT-SSCCEEE
T ss_pred EEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEEEEcccc-cC-CCceEEE
Confidence 88864 566 997776 99999999999999999999982 1111 112234333345899999 45 8999999
Q ss_pred EEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHH
Q 021783 135 AVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 212 (307)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~ 212 (307)
+++++ +.+.+...........++..+..+..+++.+.. ..+...++.+.+.+.++... ..+ +.+.
T Consensus 280 ~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~-------~~~---~~~~-- 346 (426)
T 1sff_A 280 TGRAE-VMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIA-------EKH---PEIG-- 346 (426)
T ss_dssp EEEHH-HHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-------HTC---TTEE--
T ss_pred EEcHH-HHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-------HhC---CCeE--
Confidence 99854 333322111112223445555555555544322 23344445555555554310 000 1000
Q ss_pred hhhccCCCceEEEEeC--------CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEE
Q 021783 213 YSQAKGAGSVLSFLTG--------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRI 284 (307)
Q Consensus 213 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRi 284 (307)
..++.+.++++.+. +......+.+.|..+||.+++|.. .++++|+
T Consensus 347 --~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~-------------------------~~~~iRi 399 (426)
T 1sff_A 347 --DVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP-------------------------YYNVLRI 399 (426)
T ss_dssp --EEEEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEEST-------------------------TSCEEEE
T ss_pred --EEEEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCC-------------------------CCCEEEE
Confidence 00123678888884 233467788888888998876553 1456999
Q ss_pred Eecc----CChHHHHHHHHHHHhcC
Q 021783 285 SVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 285 s~~~----~~~~~~i~~l~~~l~~~ 305 (307)
+++. +++++.++.|.++++++
T Consensus 400 ~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 400 LVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ECCccCCHHHHHHHHHHHHHHHHHH
Confidence 9863 67788888888777654
No 190
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.85 E-value=1.6e-21 Score=171.03 Aligned_cols=254 Identities=11% Similarity=0.029 Sum_probs=151.9
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccC--CcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccH
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 79 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~ 79 (307)
|+ .++.+++++| .++++...|..... ..+... |++++.++.++-......+++++++|++++++||||.+.|+
T Consensus 109 al~~~~~~l~~~g-v~~v~~~~~~~~~~---~~~~~~~~g~~~~~v~~~~g~~~~~~i~~~~~~v~~~~~~nptG~~~~~ 184 (398)
T 2fyf_A 109 FWDAAAFGLIDKR-SLHLTYGEFSAKFA---SAVSKNPFVGEPIIITSDPGSAPEPQTDPSVDVIAWAHNETSTGVAVAV 184 (398)
T ss_dssp HHHHHHHHTCSSC-EEEEECSHHHHHHH---HHHHHCTTSCCCEEEECCTTCCCCCCCCTTCSEEEEESEETTTTEECCC
T ss_pred HHHHHHHHhcCCC-eEEEeCCHHHHHHH---HHHHHhCCCCceEEEecCCCCCCCccccCCCCEEEEeCcCCCcceecch
Confidence 44 4555677887 23334444422111 122333 77777777642111112356789999999999999999998
Q ss_pred HHHHHHHHHcCCEEEEeCccCCCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHH----------
Q 021783 80 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---------- 149 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~---------- 149 (307)
++|.++ +|+++|+|++|+.+..+.... +.|++++|+||++++++| +|+++++++.+. .+....
T Consensus 185 ~~i~~~---~~~~vivD~a~~~~~~~~~~~-~~di~~~s~sK~~~~~gg--~g~l~~~~~~~~-~l~~~~~~~~~~~~~~ 257 (398)
T 2fyf_A 185 RRPEGS---DDALVVIDATSGAGGLPVDIA-ETDAYYFAPQKNFASDGG--LWLAIMSPAALS-RIEAIAATGRWVPDFL 257 (398)
T ss_dssp CCCTTC---C-CEEEEECTTTTTTSCCCGG-GCSEEEECTTSTTCSCSS--EEEEEECHHHHH-HHHHHHHTTCCCCGGG
T ss_pred HHhhhh---cCCeEEEEeccccCCcccCcc-cCcEEEEecCcccCCCCc--eEEEEECHHHHH-HhhcccccCCCCCcEE
Confidence 888887 899999999999876552222 489999999999965434 899998865443 332110
Q ss_pred ------H-----hcCCCCChhhHHHHhhcccc------HHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHH
Q 021783 150 ------N-----AEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 212 (307)
Q Consensus 150 ------~-----~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~ 212 (307)
. ....+.+......+..+++. ++...++..++++.+.+.|++.+++ .+..+
T Consensus 258 ~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~----------- 325 (398)
T 2fyf_A 258 SLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYT-TPFVT----------- 325 (398)
T ss_dssp CHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTE-EESCC-----------
T ss_pred ehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCc-eeccC-----------
Confidence 0 01112222333333333332 3444555666777777777765432 11100
Q ss_pred hhhccCCCc-eEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc---
Q 021783 213 YSQAKGAGS-VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--- 288 (307)
Q Consensus 213 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--- 288 (307)
.+...++ ++++.++...+..++.+.|..+||.++.|.. ..+++++|||++.
T Consensus 326 --~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~-----------------------~~~~~~iRis~~~~~t 380 (398)
T 2fyf_A 326 --DPGLRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEPYR-----------------------KLGRNQLRVAMFPAVE 380 (398)
T ss_dssp --SGGGBCSSEEEEEECTTSCHHHHHHHHHHTTCBCCSCCT-----------------------TTCSSEEEEECCTTSC
T ss_pred --ChhhcCCcEEEEECCCCCCHHHHHHHHHHCCcEEecCcc-----------------------cCCCCEEEEEecCCCC
Confidence 0111234 8888885322367788888888998876521 0125679999984
Q ss_pred -CChHHHHHHHHHHHhc
Q 021783 289 -EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 -~~~~~~i~~l~~~l~~ 304 (307)
++++++++.|++++++
T Consensus 381 ~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 381 PDDVSALTECVDWVVER 397 (398)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 5677777777776654
No 191
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.85 E-value=2e-20 Score=165.01 Aligned_cols=259 Identities=21% Similarity=0.210 Sum_probs=153.4
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCC--cEEEEecC-----CChHHHHhhcCC-CceEEEEeCCCCCcccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT-----CDLDEVASAIGP-WTKLVWVESPTNPRQQI 76 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~-----~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~ 76 (307)
.++.+++++||+|+++.++|+++...... ....| ...+.++. .|++++++++++ ++++|++++|+|| ..
T Consensus 107 ~a~~~~~~~gd~v~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~ 183 (420)
T 3gbx_A 107 AVYTALLQPGDTVLGMNLAQGGHLTHGSP-VNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYS--GV 183 (420)
T ss_dssp HHHHHHCCTTCEEEEEEEC-------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCC--SC
T ss_pred HHHHHhcCCCCEEEecchhhcceeccchh-hhhcccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccC--Cc
Confidence 45567889999999999999774321111 11223 34444432 489999999975 6899999888885 47
Q ss_pred ccHHHHHHHHHHcCCEEEEeCccCCCCc-----CCccCCCccEEEeccccccccCCCceeEEEEEcC--hhHHHHHHHHH
Q 021783 77 CDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKG--ERLAKELYFLQ 149 (307)
Q Consensus 77 ~~~~~l~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~--~~~~~~~~~~~ 149 (307)
.++++|.++|++||+++|+|++|+.+.. +.... ..|++++|+||+++|+. +|++++++ +.+.+.+....
T Consensus 184 ~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~g~~---gg~~~~~~~~~~~~~~~~~~~ 259 (420)
T 3gbx_A 184 VDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-HAHVVTTTTHKTLAGPR---GGLILAKGGDEELYKKLNSAV 259 (420)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-TSSEEEEESSGGGCSCS---CEEEEESSCCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccc-cCCEEEeecccCCCCCC---ceEEEEcCCcHHHHHHhhhhc
Confidence 8899999999999999999999864432 22222 48999999999997655 69999987 24544443322
Q ss_pred Hhc-CCCCChh---hHHHHh-hcc-ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceE
Q 021783 150 NAE-GSGLAPF---DCWICL-RGV-KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 223 (307)
Q Consensus 150 ~~~-~~~~~~~---~~~~~~-~~l-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 223 (307)
... .+..... ...... ..+ +.+....++..++.+.+.+.|++.. + . +.. +...++++
T Consensus 260 ~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~-------------~~~--~~~~~~~~ 322 (420)
T 3gbx_A 260 FPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRG-Y-K-------------VVS--GGTENHLF 322 (420)
T ss_dssp C----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTT-C-E-------------EGG--GSCSSSEE
T ss_pred CCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcC-C-e-------------ecc--CCCCCeEE
Confidence 211 1122111 111111 111 2334556666777777777776521 1 1 110 01245677
Q ss_pred EEEeCCH-HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc--------CChHHH
Q 021783 224 SFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--------EDVNDL 294 (307)
Q Consensus 224 ~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--------~~~~~~ 294 (307)
++.+.+. .....+.+.+.++||.++.+.. |.... ....++.+|++++. ++++++
T Consensus 323 ~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~------~~~~~-----------~~~~~~~iRi~~~~~~~~~~~~~~i~~~ 385 (420)
T 3gbx_A 323 LLDLVDKNLTGKEADAALGRANITVNKNSV------PNDPK-----------SPFVTSGIRIGSPAVTRRGFKEAEVKEL 385 (420)
T ss_dssp EEECGGGTCCHHHHHHHHHHTTEECEEECC------TTCSS-----------CTTTCSEEEEECHHHHHTTCCHHHHHHH
T ss_pred EEEcCCCCCCHHHHHHHHHHCCcEeccccC------CCCcc-----------ccCCCcceEEecchhcccCCCHHHHHHH
Confidence 7776431 2356667777778898766221 10000 00123459999962 567777
Q ss_pred HHHHHHHHhc
Q 021783 295 ISDLDKALRT 304 (307)
Q Consensus 295 i~~l~~~l~~ 304 (307)
++.|.+++++
T Consensus 386 ~~~l~~~l~~ 395 (420)
T 3gbx_A 386 AGWMCDVLDN 395 (420)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhC
Confidence 7777777654
No 192
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.85 E-value=3.4e-20 Score=164.57 Aligned_cols=245 Identities=13% Similarity=0.120 Sum_probs=155.5
Q ss_pred CCC-CeEEEcCCCCcchHHHHhhhcc---------cCCcEEEEecCCChHHHHhhcC-CCceEEEEeCCCCCccccc---
Q 021783 12 GTG-EEIVAGDDLYGGTDRLLSRVTP---------KTGVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQIC--- 77 (307)
Q Consensus 12 ~~g-d~Vlv~~~~~~~~~~~~~~~~~---------~~g~~~~~v~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~--- 77 (307)
.+| |+|++.++.|.+.......... .....++.+|.+|++++++.++ +++++|++++.++++|.+.
T Consensus 164 ~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~ 243 (439)
T 2oat_A 164 QKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDP 243 (439)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSSCHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCT
T ss_pred CCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCH
Confidence 467 8999999998765432111111 0115677888889999999994 7888999888888899876
Q ss_pred -cHHHHHHHHHHcCCEEEEeCccC-CCCcCC---ccCC--CccEEEeccccccccCCC-ceeEEEEEcChhHHHHHHHHH
Q 021783 78 -DIRKIAEMAHAHGALLLVDNSIM-SPVLSR---PLEL--GADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFLQ 149 (307)
Q Consensus 78 -~~~~l~~~~~~~~~~li~D~a~~-~~~~~~---~~~~--~~d~~~~s~~K~~~g~~g-~~~G~~~~~~~~~~~~~~~~~ 149 (307)
++++|.++|++||+++|+|++|. .+.... ...+ ..|++ |++|++++ | +++|+++++++ +.+.+....
T Consensus 244 ~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~--t~sK~l~~--G~~~~G~v~~~~~-~~~~l~~~~ 318 (439)
T 2oat_A 244 GYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV--LLGKALSG--GLYPVSAVLCDDD-IMLTIKPGE 318 (439)
T ss_dssp THHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT--TSSCCEEEEECHH-HHTTSCTTS
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEE--EecccccC--CCCCeEEEEECHH-HHhccCCCC
Confidence 79999999999999999999995 221111 1222 35665 88999953 6 78999999854 433332211
Q ss_pred HhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEe
Q 021783 150 NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 227 (307)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 227 (307)
.......++..+..+.+.++.+.. ..++..++.+.+.+.|++.. .+. .. ..++.+.++++.+
T Consensus 319 ~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~------------~~~---~~-~~~~~g~~~~v~l 382 (439)
T 2oat_A 319 HGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLP------------SDV---VT-AVRGKGLLNAIVI 382 (439)
T ss_dssp SCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTSC------------TTT---EE-EEEEETTEEEEEE
T ss_pred cccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhc------------CCC---cE-EEEeeeeEEEEEE
Confidence 112223445556665556654432 23334444455555554321 110 00 1123577888888
Q ss_pred CCH--HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHH
Q 021783 228 GSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKA 301 (307)
Q Consensus 228 ~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~ 301 (307)
.+. .....+.+.|.++||.++++. ++++|++++. +++++.++.|.++
T Consensus 383 ~~~~~~~~~~l~~~l~~~Gv~v~~~~---------------------------~~~iRi~~~~~~t~e~i~~~l~~l~~~ 435 (439)
T 2oat_A 383 KETKDWDAWKVCLRLRDNGLLAKPTH---------------------------GDIIRFAPPLVIKEDELRESIEIINKT 435 (439)
T ss_dssp CCCSSCCHHHHHHHHHHTTEECCBSS---------------------------SSEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ecCccHHHHHHHHHHHHCCeEEecCC---------------------------CCEEEEECccCCCHHHHHHHHHHHHHH
Confidence 543 235678888878899876521 3469998864 6777777777777
Q ss_pred Hhc
Q 021783 302 LRT 304 (307)
Q Consensus 302 l~~ 304 (307)
+++
T Consensus 436 l~~ 438 (439)
T 2oat_A 436 ILS 438 (439)
T ss_dssp HHT
T ss_pred HHh
Confidence 654
No 193
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.84 E-value=5.4e-21 Score=165.79 Aligned_cols=249 Identities=13% Similarity=0.029 Sum_probs=157.4
Q ss_pred HH-HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC--------ChHHHHhhcCCCceEEEEeCCCCCc
Q 021783 3 AL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAIGPWTKLVWVESPTNPR 73 (307)
Q Consensus 3 al-~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--------d~~~l~~~l~~~~~~v~~~~~~n~t 73 (307)
++ .++..++++||+|++...++.+. .|...++..| +++.++.+ ++++++++++++|++|++++.+|.|
T Consensus 103 a~n~ai~~l~~~gd~v~~~~~~~~~~--~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~t 179 (386)
T 3qm2_A 103 QFAGVPLNLLGDKTTADYVDAGYWAA--SAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETID 179 (386)
T ss_dssp HHHHHHHHHCTTCCEEEEEESSHHHH--HHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTT
T ss_pred HHHHHHHhccCCCCeEEEEeCCHHHH--HHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCc
Confidence 44 45566789999987666555444 4556678888 88877654 4577888888999999999999999
Q ss_pred ccc-ccHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHH-------H
Q 021783 74 QQI-CDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK-------E 144 (307)
Q Consensus 74 G~~-~~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~-------~ 144 (307)
|.+ .|+++|. +|+++++|++|+.|..+ +..+++ ++++|.||++ ||+| .|+++++++.+.+ .
T Consensus 180 G~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~~--~~~~s~hK~l-GP~G--~g~l~v~~~~~~~~~~~~p~~ 249 (386)
T 3qm2_A 180 GIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRYG--VIYAGAQKNI-GPAG--LTLVIVREDLLGKAHESCPSI 249 (386)
T ss_dssp TEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGCS--EEEEETTTTT-CCTT--EEEEEEEGGGCSCCCTTSCGG
T ss_pred CEecCchhhhc-----CCCEEEEEcccccCCCCCCccccC--EEEEeccccc-CCCc--cEEEEECHHHHhhhcccCCcH
Confidence 996 7888875 79999999999999988 777776 5779999999 7999 9999999765211 0
Q ss_pred --HHHH-HHh-cCCCCChhhHHHHhhccccH------HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhh
Q 021783 145 --LYFL-QNA-EGSGLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 145 --~~~~-~~~-~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 214 (307)
.... ... ...+++....+....+++.+ +...++..+.++.+.+.+++.. + +.... .
T Consensus 250 ~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~-~--~~~~~-----------~ 315 (386)
T 3qm2_A 250 LDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-F--YRNDV-----------A 315 (386)
T ss_dssp GCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCS-S--EECCB-----------C
T ss_pred HHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCC-C--cccCC-----------C
Confidence 0001 000 01122222233333333322 2233334444555555555431 1 00000 0
Q ss_pred hccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHH
Q 021783 215 QAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDL 294 (307)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~ 294 (307)
+......+++|.+++......++..|..+||.++.|... .+.+|+|++....++.
T Consensus 316 ~~~rs~~iv~f~~~~~~~~~~~~~~L~~~gI~~~~g~~~-------------------------~~~iRiS~~~~~t~ed 370 (386)
T 3qm2_A 316 QANRSRMNVPFQLADNTLDKVFLEESFAAGLHALKGHRV-------------------------VGGMRASIYNAMPIEG 370 (386)
T ss_dssp GGGBCSSEEEEEESSGGGHHHHHHHHHHTTEECCBCCTT-------------------------TCSEEEECCTTSCHHH
T ss_pred HHHcCceEEEEECCCccccHHHHHHHHHCCCEEeCCCCC-------------------------cCeEEEEcCCCCCHHH
Confidence 001124688999975322257777788889988776531 1239999987555555
Q ss_pred HHHHHHHHh
Q 021783 295 ISDLDKALR 303 (307)
Q Consensus 295 i~~l~~~l~ 303 (307)
++.|.++|+
T Consensus 371 Id~l~~~l~ 379 (386)
T 3qm2_A 371 VKALTDFMI 379 (386)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555554
No 194
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.84 E-value=6.1e-21 Score=167.25 Aligned_cols=153 Identities=13% Similarity=0.037 Sum_probs=108.0
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEE-EecC-------CChHHHHhhc---CCCceEEEEeCCCCCcccccc
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVK-RVNT-------CDLDEVASAI---GPWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~-~v~~-------~d~~~l~~~l---~~~~~~v~~~~~~n~tG~~~~ 78 (307)
+.+|||+|++++|+|+++. ..++..|.+.+ ..+. .|.+.+.+.+ .+++++++.++|+||||..++
T Consensus 133 ~~~pgd~V~ip~P~w~~y~----~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~ 208 (420)
T 4h51_A 133 FDAETTPIYLSDPTWPNHY----GVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPS 208 (420)
T ss_dssp SCTTTSCEEEEESCCTHHH----HHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCC
T ss_pred cCCCCCEEEEecCCchhHH----HHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCC
Confidence 5689999999999999888 55667787633 3332 1666666655 367888888899999999985
Q ss_pred ---HHHHHHHHHHcCCEEEEeCccCCCCcCC-----------ccCCCccEEEeccccccccCCCceeEEEEEcChhHHHH
Q 021783 79 ---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 144 (307)
Q Consensus 79 ---~~~l~~~~~~~~~~li~D~a~~~~~~~~-----------~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~ 144 (307)
+++|+++|+++++++++|++|..-...+ .......+++.||||.+ +.+|.|+|++.+..+.....
T Consensus 209 ~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~-~~~G~RvG~~~~~~~~~~~~ 287 (420)
T 4h51_A 209 QEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNM-GLYSERAGTLSLLLKDKTKR 287 (420)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTS-CCGGGCEEEEEEECSCHHHH
T ss_pred HHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEecccccc-ccccCceEEEEecccCHHHH
Confidence 8899999999999999999996432211 11224578999999999 78899999999876543322
Q ss_pred ------HHHHHHhcCCCCChhhHHHHhhc
Q 021783 145 ------LYFLQNAEGSGLAPFDCWICLRG 167 (307)
Q Consensus 145 ------~~~~~~~~~~~~~~~~~~~~~~~ 167 (307)
+....+...+..+...+......
T Consensus 288 ~~~~~~l~~~~r~~~s~~p~~~a~~~~~~ 316 (420)
T 4h51_A 288 ADVKSVMDSLIREEYTCPPAHGARLAHLI 316 (420)
T ss_dssp HHHHHHHHHHHHTTTSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcccCcchHHHHHHHHHH
Confidence 22233334444444444444433
No 195
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.84 E-value=2.1e-20 Score=165.61 Aligned_cols=244 Identities=11% Similarity=0.109 Sum_probs=150.0
Q ss_pred CCC-CeEEEcCCCCcchHHHHhhhcccCC------------cEEEEecCCChHHHHhhc-CCCceEEEEeCCCCCccccc
Q 021783 12 GTG-EEIVAGDDLYGGTDRLLSRVTPKTG------------VVVKRVNTCDLDEVASAI-GPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 12 ~~g-d~Vlv~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~d~~~l~~~l-~~~~~~v~~~~~~n~tG~~~ 77 (307)
++| |+|++.+++|.+..... ....| ..++.+|.+|++++++.+ ++++++|+++++++++|.+.
T Consensus 153 ~~gr~~vi~~~~~yhg~~~~~---~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~ 229 (433)
T 1z7d_A 153 PENMAKIVVCKNNFSGRTLGC---ISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIV 229 (433)
T ss_dssp CTTCCEEEEETTC-----------------------------CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBC
T ss_pred CCCCCeEEEEeCCcCCcchhh---hcccCCccccccCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCccC
Confidence 467 99999999987654221 11112 456778888999999999 57889999888888899876
Q ss_pred ----cHHHHHHHHHHcCCEEEEeCccC-CCCcCC---ccCC--CccEEEeccccccccCCC-ceeEEEEEcChhHHHHHH
Q 021783 78 ----DIRKIAEMAHAHGALLLVDNSIM-SPVLSR---PLEL--GADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELY 146 (307)
Q Consensus 78 ----~~~~l~~~~~~~~~~li~D~a~~-~~~~~~---~~~~--~~d~~~~s~~K~~~g~~g-~~~G~~~~~~~~~~~~~~ 146 (307)
++++|.++|++||+++|+|++|+ .+.... ...+ ..|++ |++|+++ +| +++|+++++++ +.+.+.
T Consensus 230 ~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~--~G~~~~G~v~~~~~-~~~~l~ 304 (433)
T 1z7d_A 230 PSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI--LLGKALS--GGHYPISAVLANDD-IMLVIK 304 (433)
T ss_dssp CCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG--TTSSCCEEEEECHH-HHTTCC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEE--EECcccc--CCCCCeEEEEECHH-HHhhhc
Confidence 69999999999999999999996 221111 1222 35665 7899995 47 78999999854 433322
Q ss_pred HHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 147 FLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
..........++..+..+.+.++.+.. ..++..++.+.+.+.+++.. .+ .+.+ ...++.+.+++
T Consensus 305 ~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-------~~---~~~~----~~~~~~g~~~~ 370 (433)
T 1z7d_A 305 PGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKREL-------KD---SKIV----RDVRGKGLLCA 370 (433)
T ss_dssp TTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-------TT---CTTE----EEEEEETTEEE
T ss_pred cccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-------Hh---CCCe----EEEEeeeeEEE
Confidence 111112223445556555555554432 23344444555555554320 01 1100 01123577888
Q ss_pred EEeCCH-HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHH
Q 021783 225 FLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLD 299 (307)
Q Consensus 225 ~~~~~~-~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~ 299 (307)
+.+.+. .....+.+.|.++||.++++. ++++|++++. +++++.++.|.
T Consensus 371 i~~~~~~~~~~~~~~~l~~~Gv~v~~~~---------------------------~~~iRi~~~~~~t~e~i~~~l~~l~ 423 (433)
T 1z7d_A 371 IEFKNELVNVLDICLKLKENGLITRDVH---------------------------DKTIRLTPPLCITKEQLDECTEIIV 423 (433)
T ss_dssp EEECTTTCCHHHHHHHHHHTTEECCEET---------------------------TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEccChhHHHHHHHHHHHCCeEEecCC---------------------------CCEEEEECCcCCCHHHHHHHHHHHH
Confidence 888643 236678888878899776521 3469998864 67777777777
Q ss_pred HHHhc
Q 021783 300 KALRT 304 (307)
Q Consensus 300 ~~l~~ 304 (307)
+++++
T Consensus 424 ~~l~~ 428 (433)
T 1z7d_A 424 KTVKF 428 (433)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 196
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.84 E-value=1.5e-20 Score=170.17 Aligned_cols=118 Identities=20% Similarity=0.190 Sum_probs=99.7
Q ss_pred eEEEcCCCCcchHHHHhhhcccCCc---EEEEecCC-----ChHHHHhhcCC------CceEEEEeCCCCCccccccHHH
Q 021783 16 EIVAGDDLYGGTDRLLSRVTPKTGV---VVKRVNTC-----DLDEVASAIGP------WTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 16 ~Vlv~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~-----d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
+|+++++.|+++... ++..|. +++.+|.+ |+++|++++++ ++++|++++++|+||.+.|+++
T Consensus 205 ~vl~s~~~h~s~~~~----~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~ 280 (515)
T 2jis_A 205 ALFTSKECHYSIQKG----AAFLGLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEA 280 (515)
T ss_dssp EEEEETTSCTHHHHH----HHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHH
T ss_pred EEEECCCccHHHHHH----HHHcCCCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHH
Confidence 899999999988844 444455 88888874 89999999864 5899999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCccCCCCcCC------ccCC-CccEEEeccccccccCCCceeEEEEEcCh
Q 021783 82 IAEMAHAHGALLLVDNSIMSPVLSR------PLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGE 139 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~~~~~~~~------~~~~-~~d~~~~s~~K~~~g~~g~~~G~~~~~~~ 139 (307)
|.++|++||+++|+|++|+.+.... .... ++|++++|+||++++|.| +|+++++++
T Consensus 281 I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g--~G~l~~~~~ 343 (515)
T 2jis_A 281 IADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQ--CSALLLQDT 343 (515)
T ss_dssp HHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESCC
T ss_pred HHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCC--eeEEEEeCh
Confidence 9999999999999999998766542 2222 789999999999977777 899999877
No 197
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.84 E-value=8.3e-20 Score=161.22 Aligned_cols=238 Identities=12% Similarity=0.056 Sum_probs=148.4
Q ss_pred CCCeEEEcCCCCcchHHHHhhhc----------ccCCcEEEEecCC---------------------ChHHHH-hhcC--
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVT----------PKTGVVVKRVNTC---------------------DLDEVA-SAIG-- 58 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~----------~~~g~~~~~v~~~---------------------d~~~l~-~~l~-- 58 (307)
+||+|++++|.|++......... ...+..++.++.+ |+++++ +.++
T Consensus 128 ~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~ 207 (419)
T 2eo5_A 128 GRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNL 207 (419)
T ss_dssp SCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHT
T ss_pred hCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhc
Confidence 39999999999976543322111 1112345666653 257888 8775
Q ss_pred ---CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcCC---ccCC--CccEEEecccccccc
Q 021783 59 ---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR---PLEL--GADIVMHSATKFIAG 125 (307)
Q Consensus 59 ---~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~~---~~~~--~~d~~~~s~~K~~~g 125 (307)
+++++|+++..+||||...+ +++|.++|++||+++|+|++|+ .+.... .... ..|++ |+||.++
T Consensus 208 ~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~- 284 (419)
T 2eo5_A 208 VPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI--TLAKALG- 284 (419)
T ss_dssp CCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG-
T ss_pred cCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE--Eeccccc-
Confidence 45677777666778998765 9999999999999999999997 332211 1222 34544 7999995
Q ss_pred CCC-ceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCC
Q 021783 126 HSD-VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLP 204 (307)
Q Consensus 126 ~~g-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~ 204 (307)
. | +++|+++++++.. .+ ..........++..+..+.++++.+....+...++.+.+.+.|++. +.
T Consensus 285 ~-G~~riG~~~~~~~~~--~~-~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~l~~~L~~~--~~-------- 350 (419)
T 2eo5_A 285 G-GIMPIGATIFRKDLD--FK-PGMHSNTFGGNALACAIGSKVIDIVKDLLPHVNEIGKIFAEELQGL--AD-------- 350 (419)
T ss_dssp T-TTSCCEEEEEEGGGC--CC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--SS--------
T ss_pred C-CccceEEEEEchHhh--cC-CcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hh--------
Confidence 3 7 8899999987644 33 2112222334556666666666554433444455555555555432 00
Q ss_pred CCCchHHHhhhccCCCceEEEEeCC-HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEE
Q 021783 205 EHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVR 283 (307)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iR 283 (307)
..++.+.++++.+.+ ..... +.+.|.++||.++.++ ++++|
T Consensus 351 ----------~~~~~g~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~---------------------------~~~lR 392 (419)
T 2eo5_A 351 ----------DVRGIGLAWGLEYNEKKVRDR-IIGESFKRGLLLLPAG---------------------------RSAIR 392 (419)
T ss_dssp ----------EEEEETTEEEEECSCHHHHHH-HHHHHHHTTEECEEET---------------------------TTEEE
T ss_pred ----------heEeeeEEEEEEEecCccHHH-HHHHHHHCCCEEecCC---------------------------CCEEE
Confidence 012246788888843 23355 7777878899776532 34599
Q ss_pred EEecc----CChHHHHHHHHHHHhcC
Q 021783 284 ISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 284 is~~~----~~~~~~i~~l~~~l~~~ 305 (307)
|+++. +++++.++.|.++++++
T Consensus 393 is~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 393 VIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 98764 67777888887777653
No 198
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.83 E-value=7.3e-20 Score=171.47 Aligned_cols=180 Identities=13% Similarity=0.067 Sum_probs=126.3
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC---------------ChHHHHhhcC--CCce-----
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---------------DLDEVASAIG--PWTK----- 62 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---------------d~~~l~~~l~--~~~~----- 62 (307)
+++.++++|||+|+++.++|.++... +...|+++++++.. |+++++++++ ++++
T Consensus 236 ~~i~al~~~GD~Vlv~~~~h~s~~~~----~~~~G~~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~ 311 (755)
T 2vyc_A 236 TIMQACMTDNDVVVVDRNCHKSIEQG----LMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQ 311 (755)
T ss_dssp HHHHHHCCTTCEEEEESSCCHHHHHH----HHHHCCEEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTC
T ss_pred HHHHHhcCCCCEEEECCCchHHHHHH----HHHcCCEEEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccC
Confidence 56777899999999999999988844 55679999998752 7899999885 3454
Q ss_pred ---EEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCCcC-------CccCCC--ccE------EEeccccccc
Q 021783 63 ---LVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-------RPLELG--ADI------VMHSATKFIA 124 (307)
Q Consensus 63 ---~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~-------~~~~~~--~d~------~~~s~~K~~~ 124 (307)
+++++++ |++|.+.|+++|+++|++||+++++|++|+.+... ... .+ +|+ +++|+||+++
T Consensus 312 ~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L~ 389 (755)
T 2vyc_A 312 KPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAM-RGEPGDHNGPTVFATHSTHKLLN 389 (755)
T ss_dssp CCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSS-CSCCCCCSSBEEEEEEETTTSSS
T ss_pred CCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCcccCCcchh-cCCcCCccCCCeEEEECcccccc
Confidence 8999998 68999999999999999999999999999753211 111 45 565 9999999998
Q ss_pred cCCCceeEEEEEcCh--hH-HHHHHHH-HHhcCCCCChhhHHHHhhccc---c--HHHHHHHHHHHHHHHHHHHhcC
Q 021783 125 GHSDVMAGVLAVKGE--RL-AKELYFL-QNAEGSGLAPFDCWICLRGVK---T--MALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 125 g~~g~~~G~~~~~~~--~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~l~---~--~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
|+++ +|+++++++ .+ ...+... .....++++.........+++ . ...++++..++++.+++.+++.
T Consensus 390 g~~~--g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l 464 (755)
T 2vyc_A 390 ALSQ--ASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARL 464 (755)
T ss_dssp CCTT--CEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCC--eeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 8876 888888765 22 2223222 222222333222222222222 1 3456677777888888877654
No 199
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.83 E-value=2.2e-19 Score=160.05 Aligned_cols=259 Identities=16% Similarity=0.155 Sum_probs=150.6
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHh----hhcccCCcE--EEEecC------CChHHHHhhcC-CCceEEEEeCCC
Q 021783 4 LAAVTHLLGTGEEIVAGDDLYGGTDRLLS----RVTPKTGVV--VKRVNT------CDLDEVASAIG-PWTKLVWVESPT 70 (307)
Q Consensus 4 l~~~~~~~~~gd~Vlv~~~~~~~~~~~~~----~~~~~~g~~--~~~v~~------~d~~~l~~~l~-~~~~~v~~~~~~ 70 (307)
.+++.++++|||+|+++++.|.++..... ..+...|.. ++.++. .|++++++.+. .++++|+++.++
T Consensus 134 ~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~ 213 (490)
T 2a7v_A 134 LAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSA 213 (490)
T ss_dssp HHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSS
T ss_pred HHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCCC
Confidence 36777899999999999999865431100 012334543 333332 38999999886 478889888777
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCccCCC-----CcCCccCCCccEEEeccccccccCCCceeEEEEEcCh------
Q 021783 71 NPRQQICDIRKIAEMAHAHGALLLVDNSIMSP-----VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE------ 139 (307)
Q Consensus 71 n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~-----~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~------ 139 (307)
|| ...|+++|.++|++||+++++|++|..| ..+.+.. ++|++++|+||+++||. +|+++++++
T Consensus 214 ~~--~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~-~aDiv~~S~hK~l~Gp~---GG~i~~~~~~~~~~~ 287 (490)
T 2a7v_A 214 YA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK-HADIVTTTTHKTLRGAR---SGLIFYRKGVKAVDP 287 (490)
T ss_dssp CC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG-TCSEEEEESSGGGCSCS---CEEEEEECSEEEEET
T ss_pred CC--CcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC-CCCEEEECCcccCcccc---chheeeccchhcccc
Confidence 75 5679999999999999999999998643 2233333 68999999999997765 699999874
Q ss_pred --------hHHHHHHHHHHhcC-CCCChhhHHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCC
Q 021783 140 --------RLAKELYFLQNAEG-SGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE 205 (307)
Q Consensus 140 --------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~ 205 (307)
.+.+.+........ +++..........++ +.+..+.++..++++.+.+.|++.. + .+...
T Consensus 288 ~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~G-~-~v~~~---- 361 (490)
T 2a7v_A 288 KTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERG-Y-SLVSG---- 361 (490)
T ss_dssp TTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-C-EEGGG----
T ss_pred cccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcC-c-EEecC----
Confidence 23444443322111 122221111111121 2345567788889999999988642 1 11110
Q ss_pred CCchHHHhhhccCCCceEEEEeCCHH-HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEE
Q 021783 206 HPGHELHYSQAKGAGSVLSFLTGSLA-LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRI 284 (307)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRi 284 (307)
.....++++.+.+.. ....+.+.|.+.||.++.+..+.- ..| ...+.+||
T Consensus 362 -----------~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d-~~p-----------------~~~~~iRi 412 (490)
T 2a7v_A 362 -----------GTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGD-RSA-----------------ITPGGLRL 412 (490)
T ss_dssp -----------SCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTC-CCS-----------------SSCSEEEE
T ss_pred -----------CCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCC-CCC-----------------CCCCceEe
Confidence 112457777774321 356677777778998875432110 011 12456999
Q ss_pred Eec--------cCChHHHHHHHHHHHh
Q 021783 285 SVG--------IEDVNDLISDLDKALR 303 (307)
Q Consensus 285 s~~--------~~~~~~~i~~l~~~l~ 303 (307)
+.. .+|++++++.+.++++
T Consensus 413 g~~a~t~~g~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 413 GAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp ESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred cccccccCCCCHHHHHHHHHHHHHHHH
Confidence 773 2677777777777664
No 200
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.83 E-value=2.9e-19 Score=159.04 Aligned_cols=263 Identities=19% Similarity=0.140 Sum_probs=156.6
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhccc--CCcEEEEecC------CChHHHHhhcC-CCceEEEEeCCCCCccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNT------CDLDEVASAIG-PWTKLVWVESPTNPRQQ 75 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~--~g~~~~~v~~------~d~~~l~~~l~-~~~~~v~~~~~~n~tG~ 75 (307)
.++.++++|||+|++++++|.++.... ..... .+..++.++. .|++++++.+. .+++++++++++||++.
T Consensus 122 ~a~~~~~~~Gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~ 200 (447)
T 3h7f_A 122 AVLHALMSPGERLLGLDLANGGHLTHG-MRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVL 200 (447)
T ss_dssp HHHHHHCCTTCEEEEECGGGTCCGGGT-CTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHCCSEEEEECSSCCSCC
T ss_pred HHHHHhcCCCCEEEecCcccccccchh-hhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCcc
Confidence 566678999999999999997732100 00111 2345555553 38999999985 57889999889998776
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccCCCC-----cCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHH
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIMSPV-----LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 150 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~ 150 (307)
++++|.++|++||+++|+|++|..+. .+... .++|++++|+||+++|+. +|+++++++ +.+.+.....
T Consensus 201 --~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK~l~G~~---gG~i~~~~~-~~~~l~~~~~ 273 (447)
T 3h7f_A 201 --DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHKTLGGGR---SGLIVGKQQ-YAKAINSAVF 273 (447)
T ss_dssp --CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSGGGCCCS---CEEEEECGG-GHHHHHHHHT
T ss_pred --CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCcCCCCCC---eEEEEECHH-HHHHHhhhcC
Confidence 99999999999999999999986432 22222 257999999999996654 799998864 4444433322
Q ss_pred hc-CCCCChh-hHH--HHhh-ccc-cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEE
Q 021783 151 AE-GSGLAPF-DCW--ICLR-GVK-TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 224 (307)
Q Consensus 151 ~~-~~~~~~~-~~~--~~~~-~l~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 224 (307)
.. .++.... ... .+.. ..+ .+....++..++.+.+.+.|++... ..+++ .+... ...+.+++
T Consensus 274 ~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~g~------~~~~~--~~~~~~~~ 341 (447)
T 3h7f_A 274 PGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDV----AKAGV------SVVSG--GTDVHLVL 341 (447)
T ss_dssp TTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHH----HHTTC------EEGGG--SCSSSEEE
T ss_pred CcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccc----cCCCe------EEecC--CCCCCEEE
Confidence 21 1222211 111 1111 112 4455667778888888888865300 00011 11110 11345666
Q ss_pred EEeCCH-HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec--------cCChHHHH
Q 021783 225 FLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--------IEDVNDLI 295 (307)
Q Consensus 225 ~~~~~~-~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--------~~~~~~~i 295 (307)
+.+.+. .....+.+.+...||.++.......... ...++.+|+++. .+++++++
T Consensus 342 ~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~-----------------p~~~~~lRig~~~~~~~~~~~eei~~~~ 404 (447)
T 3h7f_A 342 VDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRP-----------------PMVTSGLRIGTPALATRGFGDTEFTEVA 404 (447)
T ss_dssp EECTTSSCCHHHHHHHHHHTTEECBC------------------------------CEEEEECHHHHHHTCCHHHHHHHH
T ss_pred EEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCC-----------------CCCCCceeccCHHHhhCCCCHHHHHHHH
Confidence 766432 1244555556667888772111000000 112456999974 26788888
Q ss_pred HHHHHHHhc
Q 021783 296 SDLDKALRT 304 (307)
Q Consensus 296 ~~l~~~l~~ 304 (307)
+.|.+++++
T Consensus 405 ~~l~~~l~~ 413 (447)
T 3h7f_A 405 DIIATALAT 413 (447)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhc
Confidence 888877753
No 201
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.83 E-value=1.3e-19 Score=161.65 Aligned_cols=135 Identities=18% Similarity=0.178 Sum_probs=101.5
Q ss_pred HHHHHhcCCCCeEEEcCCCC-cchHHHHhhhcccCCcEEEEecCC---------------ChHHHHhhcCCCc----eEE
Q 021783 5 AAVTHLLGTGEEIVAGDDLY-GGTDRLLSRVTPKTGVVVKRVNTC---------------DLDEVASAIGPWT----KLV 64 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~-~~~~~~~~~~~~~~g~~~~~v~~~---------------d~~~l~~~l~~~~----~~v 64 (307)
.++.+++++|| ++++++| +++. ..++..|++++.++.+ |++++++++++++ ++|
T Consensus 105 ~al~~l~~~gd--i~~~~~~~~~~~----~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v 178 (456)
T 2ez2_A 105 LLSQLAIKPGQ--YVAGNMYFTTTR----YHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYI 178 (456)
T ss_dssp HHHHHHCCTTC--EEEESSCCHHHH----HHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEE
T ss_pred HHHHHhCCCCC--EeccccccchhH----HHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEE
Confidence 45556789999 7888999 5555 4456789999988653 7899999987555 899
Q ss_pred EEeCCCC-Ccccccc---HHHHHHHHHHcCCEEEEeCccCCC---------C-cCCcc--------CCCccEEEeccccc
Q 021783 65 WVESPTN-PRQQICD---IRKIAEMAHAHGALLLVDNSIMSP---------V-LSRPL--------ELGADIVMHSATKF 122 (307)
Q Consensus 65 ~~~~~~n-~tG~~~~---~~~l~~~~~~~~~~li~D~a~~~~---------~-~~~~~--------~~~~d~~~~s~~K~ 122 (307)
++++|+| |||.+++ +++|.++|++||+++|+|++|+.| . ..... ....|+++.|++|+
T Consensus 179 ~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~ 258 (456)
T 2ez2_A 179 CLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKD 258 (456)
T ss_dssp EEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTT
T ss_pred EEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCccc
Confidence 9999998 9999887 999999999999999999999864 2 11110 12358888889998
Q ss_pred cccCCCceeEEEEEcChhHHHHHHHH
Q 021783 123 IAGHSDVMAGVLAVKGERLAKELYFL 148 (307)
Q Consensus 123 ~~g~~g~~~G~~~~~~~~~~~~~~~~ 148 (307)
+ ++ | ++|+++++++.+.+.+...
T Consensus 259 ~-~~-~-~gG~~~~~~~~~~~~~~~~ 281 (456)
T 2ez2_A 259 C-LV-N-IGGFLCMNDDEMFSSAKEL 281 (456)
T ss_dssp T-CC-S-SCEEEEESCHHHHHHHHHH
T ss_pred C-CC-C-ceeEEEECCHHHHHHHHHH
Confidence 6 43 3 5899998656565554443
No 202
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.82 E-value=1.9e-19 Score=159.35 Aligned_cols=244 Identities=12% Similarity=0.073 Sum_probs=148.6
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcc------------cCCcEEEEecC---------CChHHHHhhcC---CCceEEEEeC
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTP------------KTGVVVKRVNT---------CDLDEVASAIG---PWTKLVWVES 68 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~------------~~g~~~~~v~~---------~d~~~l~~~l~---~~~~~v~~~~ 68 (307)
|||+|++++|.|+++......... ..++..+.++. .|++++++.++ +++++|++++
T Consensus 133 ~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p 212 (429)
T 1s0a_A 133 ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEP 212 (429)
T ss_dssp CCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECS
T ss_pred CCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEee
Confidence 699999999998775432211111 11455555542 37889998886 5777888777
Q ss_pred C-CCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---Ccc--CCCccEEEeccccccccCCC-ceeEEEEE
Q 021783 69 P-TNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPL--ELGADIVMHSATKFIAGHSD-VMAGVLAV 136 (307)
Q Consensus 69 ~-~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~--~~~~d~~~~s~~K~~~g~~g-~~~G~~~~ 136 (307)
+ +||||...+ +++|.++|++||+++|+|++|+ .+... ... ....|++ |+||++++ | +++|++++
T Consensus 213 ~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~~--G~~~iG~~~~ 288 (429)
T 1s0a_A 213 IVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL--CLGKALTG--GTMTLSATLT 288 (429)
T ss_dssp SEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT--SSSCCEEEEE
T ss_pred cccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEE--EecccccC--CCccceEEEe
Confidence 7 899998776 9999999999999999999997 33221 111 2235655 68899853 6 77999999
Q ss_pred cChhHHHHHHHHH-----HhcCCCCChhhHHHHhhccccHH--HHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCch
Q 021783 137 KGERLAKELYFLQ-----NAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH 209 (307)
Q Consensus 137 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~ 209 (307)
+++ +.+.+.... .......++..+..+.++++.+. ...++..++.+.+.+.+++.. ..|.+
T Consensus 289 ~~~-~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----------~~~~~ 356 (429)
T 1s0a_A 289 TRE-VAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPAR-----------DAEMV 356 (429)
T ss_dssp CHH-HHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGG-----------GCTTE
T ss_pred CHH-HHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-----------cCCCE
Confidence 754 444443210 01112234455555555554322 123444555556666665421 01111
Q ss_pred HHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc-
Q 021783 210 ELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI- 288 (307)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~- 288 (307)
. ..++.+.++++.+........+.+.|.++||.++.+ .+++|||++.
T Consensus 357 ~----~~~~~g~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~----------------------------~~~iRis~~~~ 404 (429)
T 1s0a_A 357 A----DVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPF----------------------------GKLIYLMPPYI 404 (429)
T ss_dssp E----EEEEETTEEEEEESSCBCHHHHHHHHHHTTEECCCB----------------------------TTEEEECCCTT
T ss_pred E----EEEEeeEEEEEEECCcccHHHHHHHHHHCCCEEecc----------------------------CCEEEEECCCC
Confidence 0 001235678888864223566777777788977641 1359999765
Q ss_pred ---CChHHHHHHHHHHHhc
Q 021783 289 ---EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 ---~~~~~~i~~l~~~l~~ 304 (307)
+++++.++.|.+++++
T Consensus 405 ~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 405 ILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp CCHHHHHHHHHHHHHHTSS
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 5667777777766654
No 203
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.82 E-value=6.8e-20 Score=162.34 Aligned_cols=252 Identities=11% Similarity=0.084 Sum_probs=143.2
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccC---------Cc--EEEEecCC--------ChHHHHhhcC----CCceEEEEeC
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKT---------GV--VVKRVNTC--------DLDEVASAIG----PWTKLVWVES 68 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~---------g~--~~~~v~~~--------d~~~l~~~l~----~~~~~v~~~~ 68 (307)
.++|+|++.++.|+++........... .. .+..++.+ |+++|++.++ +++++|+++.
T Consensus 119 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p 198 (430)
T 3i4j_A 119 PGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEP 198 (430)
T ss_dssp TTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECS
T ss_pred CCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcC
Confidence 447899999999987653211111000 00 23344443 3488888886 5667778878
Q ss_pred CCC-Ccccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc---CCccCC-CccEEEeccccccccCCC-ceeEEEEEc
Q 021783 69 PTN-PRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL---SRPLEL-GADIVMHSATKFIAGHSD-VMAGVLAVK 137 (307)
Q Consensus 69 ~~n-~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~~~~-~~d~~~~s~~K~~~g~~g-~~~G~~~~~ 137 (307)
++| ++|...+ +++|.++|++||+++|+||+|+ .+.. .....+ +....+.++||.+++ | +|+|+++++
T Consensus 199 ~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l~~--G~~r~G~~~~~ 276 (430)
T 3i4j_A 199 VVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLAA--GYAPLAGLLAA 276 (430)
T ss_dssp SCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGGTT--TSSCCEEEEEC
T ss_pred cccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcccccC--CccccEEEEEC
Confidence 788 9998776 9999999999999999999997 3221 122223 333324468899953 8 899999997
Q ss_pred ChhHHHHHHHH----HHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhc----CCCccEEecCCCCCCC
Q 021783 138 GERLAKELYFL----QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHP 207 (307)
Q Consensus 138 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~~~~~~l~~~~ 207 (307)
++ +.+.+... ........++..+..+.++++.+.. ..++..++.+.+.+.+++ .+.+..
T Consensus 277 ~~-i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------- 345 (430)
T 3i4j_A 277 PQ-VYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQ---------- 345 (430)
T ss_dssp HH-HHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEE----------
T ss_pred HH-HHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEE----------
Confidence 44 54444432 1112233455566666666553322 233444444455554443 221111
Q ss_pred chHHHhhhccCCCceEEEEeCCH---------HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC
Q 021783 208 GHELHYSQAKGAGSVLSFLTGSL---------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT 278 (307)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 278 (307)
.++.+.++++.+.+. +.+..+.+.+.++||.++++..+. .+..
T Consensus 346 --------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~--------------------~~~~ 397 (430)
T 3i4j_A 346 --------VRGTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAE--------------------PNGR 397 (430)
T ss_dssp --------EEEETTEEEEEEC------------CHHHHHHHHHHTTEECC------------------------------
T ss_pred --------EEEEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEeccccc--------------------CCCC
Confidence 122466778877432 123667888888899888763211 1223
Q ss_pred CCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 279 EDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 279 ~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
++++||+++. +++++.++.|.+++++
T Consensus 398 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 427 (430)
T 3i4j_A 398 GDHLLLGPPLSITAAEVDGLLALLAGALED 427 (430)
T ss_dssp -CEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 5689999763 7888888888888765
No 204
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.81 E-value=2.6e-19 Score=158.96 Aligned_cols=242 Identities=14% Similarity=0.124 Sum_probs=151.4
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcE--------------EEEecCC----------ChHHHHhhc----CCCceE
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVV--------------VKRVNTC----------DLDEVASAI----GPWTKL 63 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~--------------~~~v~~~----------d~~~l~~~l----~~~~~~ 63 (307)
.++++|++.++.|.+..... ....|.. +..++.+ |+++|++.+ .+++++
T Consensus 128 ~~~~~vi~~~~~yhg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~ 204 (439)
T 3dxv_A 128 TGRSGVIAFAGAYHGCTVGS---MAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGA 204 (439)
T ss_dssp HSCCEEEEETTCCCCSSHHH---HCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEE
T ss_pred hCCCEEEEECCCCCCCcHHH---HhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEE
Confidence 35678888888886655321 1222221 2344444 589999998 567899
Q ss_pred EEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccCC-CCc---CCccCCC--ccEEEeccccccccCCCceeEE
Q 021783 64 VWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVL---SRPLELG--ADIVMHSATKFIAGHSDVMAGV 133 (307)
Q Consensus 64 v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~-~~~---~~~~~~~--~d~~~~s~~K~~~g~~g~~~G~ 133 (307)
|++++++|++|.+.+ +++|.++|++||+++|+|++|+. +.. .....++ .|++ |+||.++ +|+++|+
T Consensus 205 vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~~~--~G~riG~ 280 (439)
T 3dxv_A 205 AFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL--VLGKGLG--GGLPLSA 280 (439)
T ss_dssp EEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE--EECGGGG--TTSCCEE
T ss_pred EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEE--EEcchhc--CCcceEE
Confidence 999999999999988 99999999999999999999972 111 1112223 4554 8999995 3889999
Q ss_pred EEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcC----CCccEEecCCCCCCC
Q 021783 134 LAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHP 207 (307)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~----~~~~~~~~~~l~~~~ 207 (307)
++++++ +.+.+......... .++..+..+.++++.+.. ..++..++.+.+.+.+++. +.+.
T Consensus 281 ~~~~~~-~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----------- 347 (439)
T 3dxv_A 281 VIAPAE-ILDCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIG----------- 347 (439)
T ss_dssp EEEEHH-HHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEE-----------
T ss_pred EEECHH-HHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeE-----------
Confidence 999854 43323221111222 444555555555543321 2344444555555555432 2110
Q ss_pred chHHHhhhccCCCceEEEEe--------CCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCC
Q 021783 208 GHELHYSQAKGAGSVLSFLT--------GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE 279 (307)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 279 (307)
..++.+.++++.+ ++......+.+.+..+||.++.+.. ..
T Consensus 348 -------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-------------------------~~ 395 (439)
T 3dxv_A 348 -------DIRGRGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGM-------------------------NG 395 (439)
T ss_dssp -------EEEEETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEEST-------------------------TS
T ss_pred -------EEEEEEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCC-------------------------CC
Confidence 0122467777776 3444577788888888998776432 24
Q ss_pred CeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 280 DLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 280 ~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
+++||+++. +++++.++.|.++++++
T Consensus 396 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 396 NVLEFTPPLTITETDIHKALDLLDRAFSEL 425 (439)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHHHHHHTG
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 579998764 67788888888887654
No 205
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.81 E-value=3.2e-19 Score=158.15 Aligned_cols=252 Identities=13% Similarity=0.107 Sum_probs=150.6
Q ss_pred CCCeEEEcCCCCcchHHHHhhhc----------ccCCcEEEEecC------C---------ChHHHHhhcC----CCceE
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVT----------PKTGVVVKRVNT------C---------DLDEVASAIG----PWTKL 63 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~----------~~~g~~~~~v~~------~---------d~~~l~~~l~----~~~~~ 63 (307)
.+|+|++.+|.|++......... ...|+..+.++. + |++++++.++ +++++
T Consensus 127 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~ 206 (433)
T 1zod_A 127 GKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAA 206 (433)
T ss_dssp TCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEE
T ss_pred CCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEE
Confidence 36899999999876543211111 113555554432 1 3888998886 56778
Q ss_pred EEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcCC---ccCCCccEEEeccccccccCCCceeEEEE
Q 021783 64 VWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR---PLELGADIVMHSATKFIAGHSDVMAGVLA 135 (307)
Q Consensus 64 v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~~---~~~~~~d~~~~s~~K~~~g~~g~~~G~~~ 135 (307)
|+++.++||||...+ +++|.++|++||+++|+|++|+ .+.... ...++.+..+.|+||+++ . |+++|+++
T Consensus 207 vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~sK~~~-~-G~~ig~~~ 284 (433)
T 1zod_A 207 FIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLG-A-GLPLAAIV 284 (433)
T ss_dssp EEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHH-T-TSSCEEEE
T ss_pred EEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEeccccc-C-CCCeeEEE
Confidence 887766788998765 9999999999999999999998 332211 112233333458999995 3 78899999
Q ss_pred EcChhHHHHHHHHHHh--cCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHH
Q 021783 136 VKGERLAKELYFLQNA--EGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 211 (307)
Q Consensus 136 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~ 211 (307)
++++ +.+.+...... .....++..+..+..+++.+.. ..++..++.+.+.+.+++.. . ..+.+
T Consensus 285 ~~~~-~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~l~-------~---~~~~~-- 351 (433)
T 1zod_A 285 TSAA-IEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLM-------E---RFDCI-- 351 (433)
T ss_dssp ECHH-HHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-------H---HCTTE--
T ss_pred EhHH-HHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-------H---hCCCe--
Confidence 9854 44444331111 1223344555555555543322 23344444555555554310 0 00000
Q ss_pred HhhhccCCCceEEEEeCC--------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEE
Q 021783 212 HYSQAKGAGSVLSFLTGS--------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVR 283 (307)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iR 283 (307)
...++.+.++++.+.. ......+.+.+.++||.++.|..+ + .++++|
T Consensus 352 --~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----------------------~-~~~~lR 406 (433)
T 1zod_A 352 --GDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLP----------------------G-MGGVFR 406 (433)
T ss_dssp --EEEEEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCT----------------------T-SCCEEE
T ss_pred --EEEEEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCC----------------------C-CCCEEE
Confidence 0012246677777642 123667788887889988775531 1 246799
Q ss_pred EEecc----CChHHHHHHHHHHHhc
Q 021783 284 ISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 284 is~~~----~~~~~~i~~l~~~l~~ 304 (307)
|+++. +++++.++.|.+++++
T Consensus 407 i~~~~~~t~~~i~~~l~~l~~~l~~ 431 (433)
T 1zod_A 407 IAPPLTVSEDEIDLGLSLLGQAIER 431 (433)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EECCcCCCHHHHHHHHHHHHHHHHH
Confidence 98764 6777777777777654
No 206
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.80 E-value=6.5e-19 Score=156.91 Aligned_cols=245 Identities=14% Similarity=0.142 Sum_probs=151.3
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcc-----------cCCcEEEEecC--------CC--------hHHHHhhcC----CCc
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTP-----------KTGVVVKRVNT--------CD--------LDEVASAIG----PWT 61 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~-----------~~g~~~~~v~~--------~d--------~~~l~~~l~----~~~ 61 (307)
+||+|++.++.|++.......... ..|+..+.+|. .| ++++++.++ +++
T Consensus 141 ~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~ 220 (449)
T 3a8u_X 141 TKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNI 220 (449)
T ss_dssp TCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGE
T ss_pred CCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCE
Confidence 689999999999876432111111 12445554442 14 888998886 467
Q ss_pred eEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcCC---ccCCC--ccEEEeccccccccCCC-ce
Q 021783 62 KLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR---PLELG--ADIVMHSATKFIAGHSD-VM 130 (307)
Q Consensus 62 ~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~~---~~~~~--~d~~~~s~~K~~~g~~g-~~ 130 (307)
++|++++.+|+||.+.+ +++|.++|++||+++|+|++|+ .+.... ...++ .|++ |+||++++ | ++
T Consensus 221 ~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--s~sK~l~~--G~~~ 296 (449)
T 3a8u_X 221 AAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--CIAKQVTN--GAIP 296 (449)
T ss_dssp EEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT--TSSC
T ss_pred EEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--EEcccccC--CCCc
Confidence 88888777788999888 9999999999999999999995 443211 12223 4655 78899953 6 78
Q ss_pred eEEEEEcChhHHHHHHHHH---------HhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEe
Q 021783 131 AGVLAVKGERLAKELYFLQ---------NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVN 199 (307)
Q Consensus 131 ~G~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~ 199 (307)
+|+++++++ +.+.+.... .......++..+..+.++++.+.. ..++..++.+.+.+.+++..
T Consensus 297 ~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~------ 369 (449)
T 3a8u_X 297 MGAVIASTE-IYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIK------ 369 (449)
T ss_dssp CEEEEEEHH-HHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTT------
T ss_pred eEEEEECHH-HHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh------
Confidence 999998754 444443210 011123344555555555554332 23444555555666665321
Q ss_pred cCCCCCCCchHHHhhhccCCCceEEEEeCCHH-----HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHh
Q 021783 200 YAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA-----LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 274 (307)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~ 274 (307)
.++.+ . ..++.+.++++.+.... ....+.+.|..+||.++.+.
T Consensus 370 -----~~~~~---~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g----------------------- 417 (449)
T 3a8u_X 370 -----GAKNV---I-DIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG----------------------- 417 (449)
T ss_dssp -----TSTTE---E-EEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEET-----------------------
T ss_pred -----cCCCe---E-EEeeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecCC-----------------------
Confidence 11110 0 01224678888885421 13357777777888776531
Q ss_pred cCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 275 RGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 275 ~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
+++||+++. +++++.++.|.++++++
T Consensus 418 -----~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 418 -----DTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp -----TEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred -----CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 349999753 67888888888877654
No 207
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.79 E-value=1.3e-18 Score=155.58 Aligned_cols=263 Identities=15% Similarity=0.138 Sum_probs=152.7
Q ss_pred HHHHHhcC----CCCe---EEEcCCCCcchHHHHhhhcccCCcEEEEecC---------------CChHHHHhhcCC---
Q 021783 5 AAVTHLLG----TGEE---IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---------------CDLDEVASAIGP--- 59 (307)
Q Consensus 5 ~~~~~~~~----~gd~---Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------------~d~~~l~~~l~~--- 59 (307)
.++.++++ +||+ |+++.+.|..+. ..+...|++++.++. .|+++|++++++
T Consensus 106 ~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~ 181 (467)
T 1ax4_A 106 ILFPVLLKYKQKEGKAKNPVFISNFHFDTTA----AHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGA 181 (467)
T ss_dssp HHHHHHHHHHHHTTCCSSCEEEESSCCHHHH----HHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCG
T ss_pred HHHHHHHHhhccCCCccceEEEeccccchhh----HHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCC
Confidence 44555666 9999 999855544444 344556888776531 278999999873
Q ss_pred -CceEEEEeCCCCCc-ccccc---HHHHHHHHHHcCCEEEEeCccCC-----------CCcC-CccC------CCccEEE
Q 021783 60 -WTKLVWVESPTNPR-QQICD---IRKIAEMAHAHGALLLVDNSIMS-----------PVLS-RPLE------LGADIVM 116 (307)
Q Consensus 60 -~~~~v~~~~~~n~t-G~~~~---~~~l~~~~~~~~~~li~D~a~~~-----------~~~~-~~~~------~~~d~~~ 116 (307)
++++|++++++||+ |.+++ +++|.++|++||+++|+|++++. +... .... ...|+++
T Consensus 182 ~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 261 (467)
T 1ax4_A 182 DNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALT 261 (467)
T ss_dssp GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEE
T ss_pred CCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEE
Confidence 78999999999999 78764 78999999999999999998654 2211 1111 2368899
Q ss_pred eccccccccCCCceeEEEEEcCh-hHHHHHHHHHHh-cCC----CCChhhHHHHhhccccH--HHHHHHHHHHHHHHHHH
Q 021783 117 HSATKFIAGHSDVMAGVLAVKGE-RLAKELYFLQNA-EGS----GLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEF 188 (307)
Q Consensus 117 ~s~~K~~~g~~g~~~G~~~~~~~-~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~ 188 (307)
.|+||+++ .+- +|+++.+++ .+.+.+...... .+. ............+++.. ....++..++.+.+.+.
T Consensus 262 ~s~sK~~g-~~~--Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~ 338 (467)
T 1ax4_A 262 MSAKKDPL-LNI--GGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDR 338 (467)
T ss_dssp EETTSTTC-CSS--CEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred EeccccCC-CCc--ceEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 99999995 432 578887744 454444333221 111 11111111111122211 12344445666777777
Q ss_pred HhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEE-------eCCH-HHHHHHHhcC-CcceeecCC-CCccceeec
Q 021783 189 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-------TGSL-ALSKHVVETT-KYFSITVSF-GSVKSLISM 258 (307)
Q Consensus 189 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~l-~~~gi~v~~-g~~~~~~~~ 258 (307)
|++ .++. +.. ...+.++++. +... .....+.+.| .+.||.+++ |..+... .
T Consensus 339 L~~-~~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~-~ 399 (467)
T 1ax4_A 339 LRE-AGIP-IQY----------------PTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGR-D 399 (467)
T ss_dssp HHH-TTCC-BCS----------------SCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCB-C
T ss_pred HHh-CCCC-ccc----------------CCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCcccccc-c
Confidence 765 2110 000 1134566666 3221 1367788888 888998887 5431100 0
Q ss_pred ccccCCCCCcHHHHHhcCCCCCeEEEEecc-----CChHHHHHHHHHHHh
Q 021783 259 PCFMSHASIPVEVRQARGLTEDLVRISVGI-----EDVNDLISDLDKALR 303 (307)
Q Consensus 259 p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-----~~~~~~i~~l~~~l~ 303 (307)
|.. .. ......+++|+|++. ++++++++.|.++++
T Consensus 400 ~~~----g~------~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 439 (467)
T 1ax4_A 400 PAT----GE------QKHADMEFMRLTIARRVYTNDHMDYIADALIGLKE 439 (467)
T ss_dssp TTT----CS------BCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHH
T ss_pred ccc----cc------ccccccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 000 00 000124789999983 556666666666554
No 208
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.79 E-value=4.5e-19 Score=157.23 Aligned_cols=241 Identities=15% Similarity=0.111 Sum_probs=151.5
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCC-------------------cEEEEecCCChHHHHhhcC---CCceEEEEeCCC
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTG-------------------VVVKRVNTCDLDEVASAIG---PWTKLVWVESPT 70 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g-------------------~~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~ 70 (307)
++++|++.++.|.+.... .....| ..+..+|.+|++++++.++ +++++|++++++
T Consensus 136 ~~~~vi~~~~~yhg~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~ 212 (434)
T 3l44_A 136 GRTKIMKFAGCYHGHSDL---VLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIV 212 (434)
T ss_dssp CCCEEEEETTCCCCSSGG---GGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSB
T ss_pred CCCEEEEEcCccCCCcHH---HHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCC
Confidence 689999999998765421 111111 1566677789999999886 567888888888
Q ss_pred CCcccccc----HHHHHHHHHHcCCEEEEeCccCCC---CcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 71 NPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP---VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 71 n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~~---~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
|++|.+.+ +++|.++|++||+++|+|++|... .......++...-+.|+||.++ +|+++|+++++++ +.+
T Consensus 213 ~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~~~~~~~~~~~~di~t~sK~~~--~G~~iG~~~~~~~-i~~ 289 (434)
T 3l44_A 213 GNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPDLTALGKVIG--GGLPIGAYGGKKE-IME 289 (434)
T ss_dssp CTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCSEEEEEGGGG--TTSSCEEEEECHH-HHT
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccccHHHHHcCCCCCeeehhhhhc--CCcCeeeEEEcHH-HHH
Confidence 88888887 999999999999999999999732 1111112233333557899995 5789999988754 433
Q ss_pred HHHHHH---HhcCCCCChhhHHHHhhccccH--HHHHHHHHHHHHHHHHHHhcC----CCccEEecCCCCCCCchHHHhh
Q 021783 144 ELYFLQ---NAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYS 214 (307)
Q Consensus 144 ~~~~~~---~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~~~l~~~~~~~~~~~ 214 (307)
.+.... .......++..+..+.++++.+ +...++..++.+.+.+.|++. +.+.
T Consensus 290 ~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~------------------ 351 (434)
T 3l44_A 290 QVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDI------------------ 351 (434)
T ss_dssp TBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCE------------------
T ss_pred hhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCE------------------
Confidence 332211 1112234445555555555422 223444455555555555432 1110
Q ss_pred hccCCCceEEEEeC-------------CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCe
Q 021783 215 QAKGAGSVLSFLTG-------------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDL 281 (307)
Q Consensus 215 ~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 281 (307)
..++.+.++++.+. +......+.+.+.++||.++.+.. +.
T Consensus 352 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------------~~ 404 (434)
T 3l44_A 352 TLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSKY---------------------------EA 404 (434)
T ss_dssp EEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSSTT---------------------------CC
T ss_pred EEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecCC---------------------------Cc
Confidence 01234677888762 233356778888888998877542 23
Q ss_pred EEEEecc--CChHHHHHHHHHHHhc
Q 021783 282 VRISVGI--EDVNDLISDLDKALRT 304 (307)
Q Consensus 282 iRis~~~--~~~~~~i~~l~~~l~~ 304 (307)
+|+++.. +++++.++.|.+++++
T Consensus 405 ~rl~~~~t~e~i~~~l~~l~~~l~~ 429 (434)
T 3l44_A 405 WFLTTEHTKEDIEYTIEAVGRAFAA 429 (434)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEecccCHHHHHHHHHHHHHHHHH
Confidence 7776532 7888888888888764
No 209
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.79 E-value=4.8e-19 Score=157.85 Aligned_cols=253 Identities=16% Similarity=0.168 Sum_probs=152.9
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcc---------cCCcEEEEecC--------CC---------hHHHHhhcC----CCce
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTP---------KTGVVVKRVNT--------CD---------LDEVASAIG----PWTK 62 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~---------~~g~~~~~v~~--------~d---------~~~l~~~l~----~~~~ 62 (307)
++|+|++.++.|.+.......... .....+..++. +| +++|++.++ ++++
T Consensus 138 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~ 217 (452)
T 3n5m_A 138 HRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIA 217 (452)
T ss_dssp TCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEE
T ss_pred CCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEE
Confidence 789999999999876532211110 01112334443 23 899999887 6788
Q ss_pred EEEEeCC-CCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc---CCccCCCccEEEeccccccccCCC-ceeE
Q 021783 63 LVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL---SRPLELGADIVMHSATKFIAGHSD-VMAG 132 (307)
Q Consensus 63 ~v~~~~~-~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~~~~~~d~~~~s~~K~~~g~~g-~~~G 132 (307)
+|+++++ +| +|.+.+ +++|.++|++||+++|+||+|. .+.. .....++....+.+++|.++ . | +++|
T Consensus 218 ~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~-~-G~~~ig 294 (452)
T 3n5m_A 218 AFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMAKGIT-S-AYLPLS 294 (452)
T ss_dssp EEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGG-T-TSSCCE
T ss_pred EEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEeeccccc-C-CCcceE
Confidence 8999988 89 998886 9999999999999999999987 3221 12223343333446899995 3 7 8899
Q ss_pred EEEEcChhHHHHHHH---HH---HhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCC
Q 021783 133 VLAVKGERLAKELYF---LQ---NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLP 204 (307)
Q Consensus 133 ~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~ 204 (307)
+++++++ +.+.+.. .. .......++..+..+.++++.+.. ..++..++.+.+.+.+++.. .
T Consensus 295 ~~~~~~~-i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~----------~ 363 (452)
T 3n5m_A 295 ATAVKRE-IYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEI----------G 363 (452)
T ss_dssp EEEEEHH-HHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH----------T
T ss_pred EEEECHH-HHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH----------h
Confidence 9999754 4443321 11 112223455666666666654322 23444455555555554320 0
Q ss_pred CCCchHHHhhhccCCCceEEEEeCC---------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhc
Q 021783 205 EHPGHELHYSQAKGAGSVLSFLTGS---------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQAR 275 (307)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~ 275 (307)
.++.+. ..++.+.++++.+.. .+....+.+.+..+||.++++..+.
T Consensus 364 ~~~~~~----~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~--------------------- 418 (452)
T 3n5m_A 364 EHPLVG----DIRGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTT--------------------- 418 (452)
T ss_dssp TCTTEE----EEEESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSS---------------------
T ss_pred cCCCeE----EEEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCccc---------------------
Confidence 011100 112346677776521 2234567777888899887765421
Q ss_pred CCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 276 GLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 276 ~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
...++++||+++. +++++.++.|.+++++
T Consensus 419 ~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 419 AGYNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp TTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 0125789998765 6777888888877764
No 210
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.78 E-value=6e-19 Score=151.61 Aligned_cols=244 Identities=13% Similarity=-0.004 Sum_probs=151.0
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-------ChHHHHhhcCCCceEEEEeCCCCCccccc
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQIC 77 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 77 (307)
.++..++ +||++++-..++.+. .|...++..|++++.++.+ ++++ + ++++|++|.++|.+|.||.+.
T Consensus 84 ~~~~~~~-~~~~~~~i~~~~~~~--~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~~~~~e~~tG~~~ 157 (361)
T 3m5u_A 84 MIPMNLA-LNGVCEYANTGVWTK--KAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAYICSNNTIYGTQY 157 (361)
T ss_dssp HHHHHHC-CSSCEEEEECSHHHH--HHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEEEESEETTTTEEC
T ss_pred HHHHhcC-CCCeEEEEeCCHHHH--HHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEEEeCCCCCcceeC
Confidence 3555566 788763222222233 3445567788888888753 3445 4 888999999999999999997
Q ss_pred cHHHHHHHHHHcCCEEEEeCccCCCCcC-CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH----------
Q 021783 78 DIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY---------- 146 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~---------- 146 (307)
|. +++ +|+++++|++|+.|..+ +..+ .|++++|.||++ ||+| .|+++++++.+.+...
T Consensus 158 ~~-----i~~-~~~~~~vD~~q~~g~~~id~~~--~d~~~~s~~K~~-gp~G--~g~l~~~~~~~~~~~~~~~p~~~~~~ 226 (361)
T 3m5u_A 158 QN-----YPK-TKTPLIVDASSDFFSRKVDFSN--IALFYGGVQKNA-GISG--LSCIFIRKDMLERSKNKQIPSMLNYL 226 (361)
T ss_dssp SS-----CCC-CSSCEEEECGGGTTSSCCCCTT--EEEEEEETTTTS-SCTT--CEEEEEEHHHHHHHHTCCCCGGGCHH
T ss_pred Cc-----ccc-cCCEEEEEcccccCCCCCCccc--CCEEEEechhcc-CCCc--cEEEEEcHHHHhhhcCCCCCceeehH
Confidence 62 333 49999999999999987 5553 799999999999 7999 9999999765543211
Q ss_pred HH-HHh-cCCCCChhhHHHHhhccc------cHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccC
Q 021783 147 FL-QNA-EGSGLAPFDCWICLRGVK------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 218 (307)
Q Consensus 147 ~~-~~~-~~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (307)
.. ... ...+++....+....+++ .++...++..+..+.+.+.+++.+++.....+ +...
T Consensus 227 ~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~-------------~~~r 293 (361)
T 3m5u_A 227 THAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHAD-------------KKDR 293 (361)
T ss_dssp HHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSC-------------GGGB
T ss_pred HHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCC-------------HHHc
Confidence 01 111 112233333333333332 23444455556666677777665432111100 0011
Q ss_pred CCceEEEEeCC-HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHH
Q 021783 219 AGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISD 297 (307)
Q Consensus 219 ~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~ 297 (307)
...+++|.+++ ......+...|..+||.++.|.. ..+.+|+|++..+.++.++.
T Consensus 294 s~~ivsf~~~~~~~~~~~~~~~L~~~gI~~~~g~~-------------------------~~g~iRiS~~~~~t~edId~ 348 (361)
T 3m5u_A 294 SLMNVSFNIAKNKDLEPLFVKEAEEAGMIGLKGHR-------------------------ILGGIRASIYNALNLDQVKT 348 (361)
T ss_dssp CSSEEEEEESSCTTHHHHHHHHHHHTTEECCBCCT-------------------------TTCSEEEECCTTSCHHHHHH
T ss_pred CCeEEEEECCCchhhhHHHHHHHHHCCCEEecCCC-------------------------ccCeEEEEccCCCCHHHHHH
Confidence 24688999875 11114677888888998877653 01349999987555555555
Q ss_pred HHHHHh
Q 021783 298 LDKALR 303 (307)
Q Consensus 298 l~~~l~ 303 (307)
|.++|+
T Consensus 349 l~~al~ 354 (361)
T 3m5u_A 349 LCEFMK 354 (361)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555554
No 211
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.77 E-value=4.8e-18 Score=151.68 Aligned_cols=246 Identities=13% Similarity=0.066 Sum_probs=149.2
Q ss_pred CCCeEEEcCCCCcchHHHHhhh---------cccCCcEEEEec--C----CC------------hHHHHhhcC----CCc
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRV---------TPKTGVVVKRVN--T----CD------------LDEVASAIG----PWT 61 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~---------~~~~g~~~~~v~--~----~d------------~~~l~~~l~----~~~ 61 (307)
++++|++.++.|.+........ .......+..++ . +| +++|++.+. +++
T Consensus 143 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~ 222 (460)
T 3gju_A 143 EKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETI 222 (460)
T ss_dssp TCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGE
T ss_pred CCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCE
Confidence 5799999999997765332111 111112233343 2 22 688888886 577
Q ss_pred eEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCCccEEEeccccccccCCCceeEE
Q 021783 62 KLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELGADIVMHSATKFIAGHSDVMAGV 133 (307)
Q Consensus 62 ~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~ 133 (307)
++|+++.++|++|...+ +++|.++|++||+++|+||+|+ .+... ....++....+.+++|.+++ .++++|+
T Consensus 223 aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~l~g-G~~~lg~ 301 (460)
T 3gju_A 223 AAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIAKGLTS-AYAPLSG 301 (460)
T ss_dssp EEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTT-TSSCCEE
T ss_pred EEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeeeehhhcC-CCCCeEE
Confidence 88999988999998765 9999999999999999999997 33221 11223333334468899954 2267999
Q ss_pred EEEcChhHHHHHHHH-------HHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHh----cCCCccEEec
Q 021783 134 LAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA----SHPRVKKVNY 200 (307)
Q Consensus 134 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~----~~~~~~~~~~ 200 (307)
++++++ +.+.+... ........++..+..+.++++.+.. ..++..++.+.+.+.+. +++.+..
T Consensus 302 v~~~~~-i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--- 377 (460)
T 3gju_A 302 VIVADR-VWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGE--- 377 (460)
T ss_dssp EEEEHH-HHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEE---
T ss_pred EEECHH-HHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEE---
Confidence 999855 44444321 1112223455666666666654322 23444444444444442 2221111
Q ss_pred CCCCCCCchHHHhhhccCCCceEEEEeCCH-----------HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcH
Q 021783 201 AGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 269 (307)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~ 269 (307)
.++.+.++.+.+... +....+.+.+.++||.++++.
T Consensus 378 ---------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------------------ 424 (460)
T 3gju_A 378 ---------------VRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP------------------ 424 (460)
T ss_dssp ---------------EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS------------------
T ss_pred ---------------EeeeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC------------------
Confidence 123466777777422 125677777878888776533
Q ss_pred HHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 270 EVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 270 ~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
.++++||+++. +++++.++.|.+++++
T Consensus 425 --------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 455 (460)
T 3gju_A 425 --------QGDILGFAPPLCLTREQADIVVSKTADAVKS 455 (460)
T ss_dssp --------SSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred --------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 13569999654 6788888888887754
No 212
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.76 E-value=1.7e-18 Score=153.46 Aligned_cols=247 Identities=16% Similarity=0.143 Sum_probs=151.5
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhc----------ccCCc------EEEEecCCChHHHHhhcC---CCceEEEEeCCCC
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVT----------PKTGV------VVKRVNTCDLDEVASAIG---PWTKLVWVESPTN 71 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~----------~~~g~------~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n 71 (307)
+.++++|++.+++|.+......... ...|+ ++..++.+|++++++.++ +++++|++++.++
T Consensus 135 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~ 214 (434)
T 2epj_A 135 YTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIA 214 (434)
T ss_dssp HHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBC
T ss_pred hhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcC
Confidence 3456788888888876542100000 11243 366777789999999986 4788888888888
Q ss_pred Ccccccc----HHHHHHHHHHcCCEEEEeCccCCCCcC-C---ccCCC--ccEEEeccccccccCCCceeEEEEEcChhH
Q 021783 72 PRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLS-R---PLELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERL 141 (307)
Q Consensus 72 ~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~-~---~~~~~--~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~ 141 (307)
++|.+.+ +++|.++|++||+++|+|++|+ +... . ...++ .|+ .|+||+++ . |+++|+++++++ +
T Consensus 215 ~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di--~s~sK~l~-~-G~~~G~v~~~~~-~ 288 (434)
T 2epj_A 215 NAGVIPPRREFLAALQRLSRESGALLILDEVVT-GFRLGLEGAQGYFNIEGDI--IVLGKIIG-G-GFPVGAVAGSRE-V 288 (434)
T ss_dssp SSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TTTSSTTHHHHHHTCCCSE--EEEEGGGG-T-TSSCEEEEECHH-H
T ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ceeCCcchhhHHhCCCCCe--eeecchhc-C-CcceeeeeecHH-H
Confidence 8999887 9999999999999999999998 2211 1 11123 454 58899995 3 788999999854 4
Q ss_pred HHHHHHHHH-hc--CCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhc
Q 021783 142 AKELYFLQN-AE--GSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 216 (307)
Q Consensus 142 ~~~~~~~~~-~~--~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 216 (307)
.+.+..... .. ....++..+..+...++.+.. ..++..++.+.+.+.|++... . .+ +. ...
T Consensus 289 ~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~--~~-~~---------~~~ 354 (434)
T 2epj_A 289 MSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLD--R--TG-LP---------YTI 354 (434)
T ss_dssp HTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--H--HT-CC---------EEE
T ss_pred HHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHh--h--CC-Cc---------EEE
Confidence 333322110 11 123444555555555554322 234444555555555543200 0 00 00 001
Q ss_pred cCCCceEEEEeCC-------------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEE
Q 021783 217 KGAGSVLSFLTGS-------------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVR 283 (307)
Q Consensus 217 ~~~~~~~~~~~~~-------------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iR 283 (307)
++.+.++++.+.+ ......+.+.|.++||.++.|.. .++|
T Consensus 355 ~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------------~~~~ 407 (434)
T 2epj_A 355 NRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNL---------------------------EAVF 407 (434)
T ss_dssp EEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT---------------------------SCEE
T ss_pred EEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccCC---------------------------CcEE
Confidence 2246788888854 23467788888888998887642 1155
Q ss_pred EEec--cCChHHHHHHHHHHHhc
Q 021783 284 ISVG--IEDVNDLISDLDKALRT 304 (307)
Q Consensus 284 is~~--~~~~~~~i~~l~~~l~~ 304 (307)
+++. .+++++.++.|.+++++
T Consensus 408 ~~~~~t~e~i~~~l~~l~~~l~~ 430 (434)
T 2epj_A 408 TGLPHQGEALEIAVEGLRSSLKT 430 (434)
T ss_dssp CCTTCSHHHHHHHHHHHHHHHHH
T ss_pred EeccCCHHHHHHHHHHHHHHHHH
Confidence 5443 26788888888887754
No 213
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.76 E-value=1.8e-18 Score=154.11 Aligned_cols=246 Identities=11% Similarity=0.054 Sum_probs=152.4
Q ss_pred CC-CeEEEcCCCCcchHHHHhhhcc----------cCCcEEEEecC-------CChHHHHhhcC---CCceEEEEeC-CC
Q 021783 13 TG-EEIVAGDDLYGGTDRLLSRVTP----------KTGVVVKRVNT-------CDLDEVASAIG---PWTKLVWVES-PT 70 (307)
Q Consensus 13 ~g-d~Vlv~~~~~~~~~~~~~~~~~----------~~g~~~~~v~~-------~d~~~l~~~l~---~~~~~v~~~~-~~ 70 (307)
+| ++|++.++.|.+.......... .....+..++. +|+++|++.++ +++++|++++ ++
T Consensus 165 ~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~ 244 (457)
T 3tfu_A 165 PGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQ 244 (457)
T ss_dssp TTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEE
T ss_pred CCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCc
Confidence 45 5889888888765432211110 11112233333 37889998887 6789999998 99
Q ss_pred CCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc---CCccCCC--ccEEEeccccccccCCCceeEEEEEcChh
Q 021783 71 NPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL---SRPLELG--ADIVMHSATKFIAGHSDVMAGVLAVKGER 140 (307)
Q Consensus 71 n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~~~~~--~d~~~~s~~K~~~g~~g~~~G~~~~~~~~ 140 (307)
|++|...+ +++|.++|++||+++|+||+|. .+.. .....++ .|++ |++|.++| ..+++|+++++++
T Consensus 245 ~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l~g-G~~~lG~v~~~~~- 320 (457)
T 3tfu_A 245 GAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM--CVGKALTG-GYLSLAATLCTAD- 320 (457)
T ss_dssp CTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGT-TSSCCEEEEEEHH-
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEE--EEChhhhC-CCcceEEEEEcHH-
Confidence 99999875 9999999999999999999986 2221 1122223 4555 88999854 2257999999854
Q ss_pred HHHHHHHH-----HHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHh
Q 021783 141 LAKELYFL-----QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 213 (307)
Q Consensus 141 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 213 (307)
+.+.+... ........++..+..+.+.++.+.. ..++..+..+.+.+.++... ..+.+.
T Consensus 321 i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~-----------~~~~v~--- 386 (457)
T 3tfu_A 321 VAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTAR-----------ALPAVT--- 386 (457)
T ss_dssp HHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGG-----------GSTTEE---
T ss_pred HHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-----------cCCCee---
Confidence 44444311 1112223455566666665553321 23444455555565555321 011110
Q ss_pred hhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----C
Q 021783 214 SQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----E 289 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~ 289 (307)
..++.+.++++.+........+.+.+.++||.+++. .+++|++++. +
T Consensus 387 -~vr~~G~~~~i~l~~~~~~~~~~~~l~~~Gv~v~~~----------------------------~~~lRi~p~~~~t~e 437 (457)
T 3tfu_A 387 -DVRVCGAIGVIECDRPVDLAVATPAALDRGVWLRPF----------------------------RNLVYAMPPYICTPA 437 (457)
T ss_dssp -EEEECSSCEEEEESSCCCHHHHHHHHHHTTEECCCB----------------------------TTEEEECCCTTCCHH
T ss_pred -eeecCCeEEEEEECCcccHHHHHHHHHHCCeEEEec----------------------------CCEEEEECCCCCCHH
Confidence 113357788888854334677888888889987642 1349998754 7
Q ss_pred ChHHHHHHHHHHHhcC
Q 021783 290 DVNDLISDLDKALRTG 305 (307)
Q Consensus 290 ~~~~~i~~l~~~l~~~ 305 (307)
++++.++.|.++++++
T Consensus 438 ei~~~l~~L~~~l~~~ 453 (457)
T 3tfu_A 438 EITQITSAMVEVARLV 453 (457)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8888888888888764
No 214
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.76 E-value=1.5e-18 Score=154.74 Aligned_cols=243 Identities=17% Similarity=0.134 Sum_probs=140.1
Q ss_pred CCCeEEEcCCCCcchHHHHhhhc-------ccCCc------EEEEecCCChHHHHhhcC---CCceEEEEeCCCCCcccc
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVT-------PKTGV------VVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQI 76 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~-------~~~g~------~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~ 76 (307)
.+++|++.++.|++......... ...|+ .+..++.+|++++++.++ +++++|++++++|++|.+
T Consensus 138 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~ 217 (453)
T 2cy8_A 138 GRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVT 217 (453)
T ss_dssp CCCEEEEECC----------------------------CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHHHHTE
T ss_pred CCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCCCCHHHHHHHHHhcCCCEEEEEECCCCCCCCCc
Confidence 45788888898876543211101 01243 355667789999999887 477888888777889998
Q ss_pred cc----HHHHHHHHHHcCCEEEEeCccCCCCcC-C---ccCCC--ccEEEeccccccccCCCceeEEEEEcChhHHHHHH
Q 021783 77 CD----IRKIAEMAHAHGALLLVDNSIMSPVLS-R---PLELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 146 (307)
Q Consensus 77 ~~----~~~l~~~~~~~~~~li~D~a~~~~~~~-~---~~~~~--~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~ 146 (307)
.+ +++|.++|++||+++|+|++|+ +... . ...++ .|++ |++|+++ . |+++|+++++++ +.+.+.
T Consensus 218 ~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~--s~sK~l~-~-G~~~G~v~~~~~-~~~~l~ 291 (453)
T 2cy8_A 218 PVSDSFLREGAELARQYGALFILDEVIS-GFRVGNHGMQALLDVQPDLT--CLAKASA-G-GLPGGILGGRED-VMGVLS 291 (453)
T ss_dssp ECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTCTTHHHHHHTCCCSEE--EEEGGGG-T-TSSCEEEEECHH-HHTTSS
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEecCcc-ccccCchhhhHHhCCCCcEE--EEChhhh-C-CcceEEEechHH-HHHHhc
Confidence 87 9999999999999999999997 3211 1 11123 4654 8899995 3 678999999854 433332
Q ss_pred H-----HHHhcCCCCChhhHHHHhhcccc-H-HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 147 F-----LQNAEGSGLAPFDCWICLRGVKT-M-ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 147 ~-----~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
. .........++..+..+.+.++. + ....+...++.+.+.+.+++... . .+ + . ...++.
T Consensus 292 ~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~--~~-~---~------~~~~~~ 357 (453)
T 2cy8_A 292 RGSDRKVLHQGTFTGNPITAAAAIAAIDTILEDDVCAKINDLGQFAREAMNHLFA--R--KG-L---N------WLAYGR 357 (453)
T ss_dssp SCC---------CCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH--H--TT-C---C------EEEECC
T ss_pred cccCCCceeCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh--h--CC-C---c------EEEEEe
Confidence 2 11112223445555555555554 3 22334445555555555543200 0 00 0 0 001235
Q ss_pred CceEEEEeCC-------------------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCC
Q 021783 220 GSVLSFLTGS-------------------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTED 280 (307)
Q Consensus 220 ~~~~~~~~~~-------------------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 280 (307)
+.++++.+.+ ......+.+.+.++||.++.+.
T Consensus 358 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~----------------------------- 408 (453)
T 2cy8_A 358 FSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGRG----------------------------- 408 (453)
T ss_dssp TTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTTT-----------------------------
T ss_pred eeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeCCC-----------------------------
Confidence 7788888863 1235677787877899774321
Q ss_pred eEEEEec--cCChHHHHHHHHHHHhc
Q 021783 281 LVRISVG--IEDVNDLISDLDKALRT 304 (307)
Q Consensus 281 ~iRis~~--~~~~~~~i~~l~~~l~~ 304 (307)
.+|++.. .+++++.++.|.+++++
T Consensus 409 ~~~l~~~~t~~~i~~~l~~l~~~l~~ 434 (453)
T 2cy8_A 409 SVFLSAQHEREHVEHLVTTFDRVLDR 434 (453)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 1555432 26888888888887753
No 215
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.76 E-value=3.1e-18 Score=152.38 Aligned_cols=242 Identities=14% Similarity=0.110 Sum_probs=146.9
Q ss_pred CCeEEEcCCCCcchHHHHhhhc----------ccCCcEEEEecCCC--hHH-------------HHhhcC---CCceEEE
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVT----------PKTGVVVKRVNTCD--LDE-------------VASAIG---PWTKLVW 65 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~----------~~~g~~~~~v~~~d--~~~-------------l~~~l~---~~~~~v~ 65 (307)
||+|++.++.|.+......... .....+++.+|.+| .+. |++.++ +++++|+
T Consensus 157 ~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi 236 (449)
T 2cjg_A 157 GTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFV 236 (449)
T ss_dssp CCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEE
T ss_pred CCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEE
Confidence 8999999999987542211111 11123667777766 433 888874 6889999
Q ss_pred EeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcCC---ccC--CCccEEEeccccccccCCCceeEEEE
Q 021783 66 VESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR---PLE--LGADIVMHSATKFIAGHSDVMAGVLA 135 (307)
Q Consensus 66 ~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~~---~~~--~~~d~~~~s~~K~~~g~~g~~~G~~~ 135 (307)
+++++||+|...+ +++|.++|++||+++|+|++|+ .+.... ... ...|++ |++|++ + +|+++
T Consensus 237 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l--~----iG~~~ 308 (449)
T 2cjg_A 237 AEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV--AFGKKT--Q----VCGVM 308 (449)
T ss_dssp ECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGG--S----SEEEE
T ss_pred EeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEE--EecCcc--c----EEEEE
Confidence 8888899997666 9999999999999999999998 322211 111 234654 688988 2 78888
Q ss_pred EcChhHHHH-----HHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCc
Q 021783 136 VKGERLAKE-----LYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 208 (307)
Q Consensus 136 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 208 (307)
++++ +.+. ............++..+..+.++++.+.. ..++..++.+.+.+.|++... .++..
T Consensus 309 ~~~~-~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~~----- 378 (449)
T 2cjg_A 309 AGRR-VDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAA----DFPAV----- 378 (449)
T ss_dssp ECGG-GGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH----HSTTT-----
T ss_pred ECHH-HhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh----hCCCc-----
Confidence 8865 3332 11011111223345556665566654322 233444555555555543200 00100
Q ss_pred hHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc
Q 021783 209 HELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 288 (307)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 288 (307)
+ ...++.+.++.+.+.+......+.+.|.++||.++.++ ++++|++++.
T Consensus 379 ~----~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g---------------------------~~~iRi~~~~ 427 (449)
T 2cjg_A 379 V----LDPRGRGLMCAFSLPTTADRDELIRQLWQRAVIVLPAG---------------------------ADTVRFRPPL 427 (449)
T ss_dssp S----EEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEET---------------------------TTEEEECCCT
T ss_pred e----eeEeeccEEEEEEECChHHHHHHHHHHHHCCeEEecCC---------------------------CCEEEEECCC
Confidence 0 00123477888888765446778888877888776532 3569998765
Q ss_pred ----CChHHHHHHHHHHHhc
Q 021783 289 ----EDVNDLISDLDKALRT 304 (307)
Q Consensus 289 ----~~~~~~i~~l~~~l~~ 304 (307)
+++++.++.|.+++++
T Consensus 428 ~~t~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 428 TVSTAEIDAAIAAVRSALPV 447 (449)
T ss_dssp TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 6777777777777654
No 216
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.76 E-value=3.1e-18 Score=151.59 Aligned_cols=246 Identities=15% Similarity=0.094 Sum_probs=152.6
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCC-------------------cEEEEecCCChHHHHhhcC---CCceEEEEeCCC
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTG-------------------VVVKRVNTCDLDEVASAIG---PWTKLVWVESPT 70 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g-------------------~~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~ 70 (307)
++++|++.++.|.+... ......| .+++.++.+|++++++.+. +++++|++++++
T Consensus 134 ~~~~vi~~~~~yhg~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~ 210 (429)
T 3k28_A 134 GRNKILKFIGCYHGHGD---SLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVA 210 (429)
T ss_dssp TCCEEEEEETCCCCSCG---GGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSB
T ss_pred CCCEEEEECCCcCCCcH---HHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCC
Confidence 67899998888865441 1111111 1456667779999999886 567888888888
Q ss_pred CCcccccc----HHHHHHHHHHcCCEEEEeCccCCCCcCC---ccCCCccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 71 NPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLSR---PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 71 n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~~---~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
|++|.+.+ +++|.++|++||+++|+||+|....... ...++....+.++||.++ . |+++|+++++++ +.+
T Consensus 211 ~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~t~sK~~~-~-G~~iG~~~~~~~-~~~ 287 (429)
T 3k28_A 211 GNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRVAYNCGQGYYGVTPDLTCLGKVIG-G-GLPVGAYGGKAE-IMR 287 (429)
T ss_dssp CTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTSSTTHHHHHHTCCCSEEEECGGGG-T-TSCCEEEEECHH-HHT
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchHHHHhCCCCceehhhhhhc-C-CCCeEEEEEcHH-HHh
Confidence 88898887 9999999999999999999996321101 112233333457899994 3 788999999754 433
Q ss_pred HHHHHH---HhcCCCCChhhHHHHhhccccH-HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCC
Q 021783 144 ELYFLQ---NAEGSGLAPFDCWICLRGVKTM-ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 219 (307)
Q Consensus 144 ~~~~~~---~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (307)
.+.... .......++..+..+.++++.. +...++..++.+.+.+.|++... .++... ..++.
T Consensus 288 ~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~----------~~~~~ 353 (429)
T 3k28_A 288 QVAPSGPIYQAGTLSGNPLAMAAGYETLVQLTPESYVEFERKAEMLEAGLRKAAE----KHGIPH----------HINRA 353 (429)
T ss_dssp TBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH----HTTCCC----------EEEEE
T ss_pred hhccCCCccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hCCCCE----------EEEee
Confidence 332211 1112234455555555555422 34455556666666666654210 000000 01224
Q ss_pred CceEEEEeC-------------CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe
Q 021783 220 GSVLSFLTG-------------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 286 (307)
Q Consensus 220 ~~~~~~~~~-------------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 286 (307)
+.++++.+. +......+.+.+.++||.++.+.. +.+|+++
T Consensus 354 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------------~~~r~~~ 406 (429)
T 3k28_A 354 GSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQF---------------------------EGLFLST 406 (429)
T ss_dssp TTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT---------------------------SCBCCCT
T ss_pred ccEEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEecCCC---------------------------CCEEEEC
Confidence 667777652 223356777888888998876532 1266655
Q ss_pred c--cCChHHHHHHHHHHHhcC
Q 021783 287 G--IEDVNDLISDLDKALRTG 305 (307)
Q Consensus 287 ~--~~~~~~~i~~l~~~l~~~ 305 (307)
. .+++++.++.|.++++++
T Consensus 407 ~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 407 VHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp TCCHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHHHHH
Confidence 3 278899999999988765
No 217
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.76 E-value=3.9e-18 Score=151.81 Aligned_cols=245 Identities=13% Similarity=0.109 Sum_probs=140.3
Q ss_pred CCeEEEcCCCCcchHHHHhhhcc---------cCCcEEEEecCCC----------------hHHHHhhcC---CCceEEE
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTP---------KTGVVVKRVNTCD----------------LDEVASAIG---PWTKLVW 65 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~---------~~g~~~~~v~~~d----------------~~~l~~~l~---~~~~~v~ 65 (307)
+|+|++.++.|.+.......... .....+..++..+ +++|++.+. +++++|+
T Consensus 136 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 215 (448)
T 3dod_A 136 KQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALS 215 (448)
T ss_dssp CCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEE
T ss_pred CCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEE
Confidence 49999999999765522111100 0011233444332 788998886 5678888
Q ss_pred EeCCC-CCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCCccEEEeccccccccCCC-ceeEEEE
Q 021783 66 VESPT-NPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELGADIVMHSATKFIAGHSD-VMAGVLA 135 (307)
Q Consensus 66 ~~~~~-n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~~d~~~~s~~K~~~g~~g-~~~G~~~ 135 (307)
++.++ |++|...+ +++|.++|++||+++|+||+|+ .+... ....++....+.+++|.+++ | +++|+++
T Consensus 216 ~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~sK~l~~--G~~~ig~v~ 293 (448)
T 3dod_A 216 IESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITG--GYLPIAVTF 293 (448)
T ss_dssp EESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGT--TSSCCEEEE
T ss_pred EeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEEecccccC--CcCceEEEE
Confidence 88887 88998775 9999999999999999999997 32211 12233433334468899953 6 5899999
Q ss_pred EcChhHHHHHHH-------HHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCC
Q 021783 136 VKGERLAKELYF-------LQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 206 (307)
Q Consensus 136 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~ 206 (307)
++++ +.+.+.. .........++..+..+.++++.+.. ..++..++.+.+.+.+++.. .+
T Consensus 294 ~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~-----------~~ 361 (448)
T 3dod_A 294 ATED-IYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLH-----------AL 361 (448)
T ss_dssp EEHH-HHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHT-----------TS
T ss_pred ECHH-HHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHh-----------cC
Confidence 9854 4443322 11112233455666666666654322 23444555555555554311 11
Q ss_pred CchHHHhhhccCCCceEEEEeCCHHH-----------HHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhc
Q 021783 207 PGHELHYSQAKGAGSVLSFLTGSLAL-----------SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQAR 275 (307)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~ 275 (307)
+.+ ...++.+.++++.+..... ...+.+.+.++||.+.++.
T Consensus 362 ~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------------------------ 413 (448)
T 3dod_A 362 PHV----GDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG------------------------ 413 (448)
T ss_dssp TTE----EEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET------------------------
T ss_pred CCe----EEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccC------------------------
Confidence 100 0112346788887743211 3567777777888776431
Q ss_pred CCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 276 GLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 276 ~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+++|++++. +++++.++.|.+++++
T Consensus 414 ----~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 442 (448)
T 3dod_A 414 ----DVIAFLPPLASTAEELSEMVAIMKQAIHE 442 (448)
T ss_dssp ----TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ----CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 359997654 6788888888877754
No 218
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.75 E-value=2.1e-17 Score=147.48 Aligned_cols=242 Identities=13% Similarity=0.090 Sum_probs=145.8
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcc---------c--CCcEEEEecC----C---C--------hHHHHhhcC----CCce
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTP---------K--TGVVVKRVNT----C---D--------LDEVASAIG----PWTK 62 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~---------~--~g~~~~~v~~----~---d--------~~~l~~~l~----~~~~ 62 (307)
++++|++.++.|.++......... . .+...+.+|. + | +++|++.+. ++++
T Consensus 142 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~ 221 (459)
T 4a6r_A 142 EKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVA 221 (459)
T ss_dssp TCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEE
T ss_pred CCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEE
Confidence 579999999999876533221111 1 1333333332 1 2 788888875 4677
Q ss_pred EEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCC--ccEEEeccccccccCCCceeE
Q 021783 63 LVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELG--ADIVMHSATKFIAGHSDVMAG 132 (307)
Q Consensus 63 ~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~--~d~~~~s~~K~~~g~~g~~~G 132 (307)
+|+++.+++++|...+ +++|.++|++||+++|+||+|. .+... ....++ .|++ +++|.+++ +++++|
T Consensus 222 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~--t~sK~l~g-g~~~lg 298 (459)
T 4a6r_A 222 AFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLF--TAAKGLSS-GYLPIG 298 (459)
T ss_dssp EEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSSCCE
T ss_pred EEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee--ehhhhhcC-CCCCcc
Confidence 8888888888888776 9999999999999999999997 22221 111223 4554 57899853 447799
Q ss_pred EEEEcChhHHHHHH---HHHHhcCCCCChhhHHHHhhccccHHH--HHHHHH-HHHHHHHHHH-h---cCCCccEEecCC
Q 021783 133 VLAVKGERLAKELY---FLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQ-DNAQKIAEFL-A---SHPRVKKVNYAG 202 (307)
Q Consensus 133 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~-~~~~~l~~~l-~---~~~~~~~~~~~~ 202 (307)
+++++++ +.+.+. ..........++..+..+.++++.+.. ..++.. +..+.+.+.+ + .++.+..
T Consensus 299 ~v~~~~~-i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~----- 372 (459)
T 4a6r_A 299 AVFVGKR-VAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDD----- 372 (459)
T ss_dssp EEEECHH-HHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEE-----
T ss_pred ceeeCHH-HHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-----
Confidence 9999755 544443 111122223445556666666653321 233334 4444555554 2 2221111
Q ss_pred CCCCCchHHHhhhccCCCceEEEEeCCH-----------HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHH
Q 021783 203 LPEHPGHELHYSQAKGAGSVLSFLTGSL-----------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEV 271 (307)
Q Consensus 203 l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~ 271 (307)
.++.+.++.+.+... .....+.+.+.++||.+++++
T Consensus 373 -------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-------------------- 419 (459)
T 4a6r_A 373 -------------VRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG-------------------- 419 (459)
T ss_dssp -------------EEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET--------------------
T ss_pred -------------EEEEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC--------------------
Confidence 123466777776421 125677777777888776522
Q ss_pred HHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 272 RQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 272 ~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+++||+++. +++++.++.|.+++++
T Consensus 420 --------~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 448 (459)
T 4a6r_A 420 --------DHIVSAPPLVMTRAEVDEMLAVAERCLEE 448 (459)
T ss_dssp --------TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred --------CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 349999754 6788888888777754
No 219
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.75 E-value=1.2e-17 Score=148.71 Aligned_cols=246 Identities=17% Similarity=0.175 Sum_probs=146.3
Q ss_pred CCCeEEEcCCCCcchHHHHhhhc----------ccCCcEEEEecCC------------------ChHHHHhh----cC-C
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVT----------PKTGVVVKRVNTC------------------DLDEVASA----IG-P 59 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~----------~~~g~~~~~v~~~------------------d~~~l~~~----l~-~ 59 (307)
.+++|++.+++|.+......... ......+..++.. +++.+++. +. +
T Consensus 147 g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~ 226 (451)
T 3oks_A 147 HKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGAD 226 (451)
T ss_dssp CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGG
T ss_pred CCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCC
Confidence 45899999999886653322111 1111234445543 13333333 33 4
Q ss_pred CceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCc---CCccCCCccEEEeccccccccCCCcee
Q 021783 60 WTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVL---SRPLELGADIVMHSATKFIAGHSDVMA 131 (307)
Q Consensus 60 ~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~---~~~~~~~~d~~~~s~~K~~~g~~g~~~ 131 (307)
++++|+++..+++.|...+ +++|.++|++||+++|+||+|. .+.. .....++....+.|++|.+++ |+++
T Consensus 227 ~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~--G~~i 304 (451)
T 3oks_A 227 NLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTAKGIAG--GLPL 304 (451)
T ss_dssp GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGT--TSSC
T ss_pred CEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeeehhhhhC--Ccce
Confidence 5667777776777777765 9999999999999999999997 2221 122233433333478999953 7899
Q ss_pred EEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhc----CCCccEEecCCCCC
Q 021783 132 GVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPE 205 (307)
Q Consensus 132 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~~~~~~l~~ 205 (307)
|+++++++ +.+.+...........++..+..+.+.++.+.. ..++..+..+.+.+.+++ ++.+.
T Consensus 305 G~v~~~~~-~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--------- 374 (451)
T 3oks_A 305 SAVTGRAE-IMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIG--------- 374 (451)
T ss_dssp EEEEEEHH-HHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEE---------
T ss_pred EEEEECHH-HHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeE---------
Confidence 99998754 433332222222334555666666666654322 233344444444444442 22111
Q ss_pred CCchHHHhhhccCCCceEEEEeC-------CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCC
Q 021783 206 HPGHELHYSQAKGAGSVLSFLTG-------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT 278 (307)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 278 (307)
..++.+.++++.+. +.+....+.+.+.++||.+.++.. .
T Consensus 375 ---------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-------------------------~ 420 (451)
T 3oks_A 375 ---------DVRGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGT-------------------------Y 420 (451)
T ss_dssp ---------EEEEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECT-------------------------T
T ss_pred ---------EEEEeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCC-------------------------C
Confidence 11334678888772 344577888888888998765432 1
Q ss_pred CCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 279 EDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 279 ~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
.+++|++++. +++++.++.|.+++++
T Consensus 421 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 421 GNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp SCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 3469998764 6777888888877764
No 220
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.75 E-value=1.3e-18 Score=153.94 Aligned_cols=248 Identities=13% Similarity=0.116 Sum_probs=148.2
Q ss_pred CCCeEEEcCCCCcchHHHHhhh----------cccCC------cEEEEecCCChHHHHhhcCC---CceEEEEeCCCCCc
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRV----------TPKTG------VVVKRVNTCDLDEVASAIGP---WTKLVWVESPTNPR 73 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~----------~~~~g------~~~~~v~~~d~~~l~~~l~~---~~~~v~~~~~~n~t 73 (307)
.+++|++.++.|++........ -...| ..+..++.+|++++++.+++ ++++|++++++|++
T Consensus 133 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~ 212 (427)
T 3fq8_A 133 GRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNS 212 (427)
T ss_dssp CCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTT
T ss_pred CCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCC
Confidence 4678998888887643110000 00111 13666777899999999863 78899999999999
Q ss_pred ccccc----HHHHHHHHHHcCCEEEEeCccCC---CCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHH
Q 021783 74 QQICD----IRKIAEMAHAHGALLLVDNSIMS---PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 146 (307)
Q Consensus 74 G~~~~----~~~l~~~~~~~~~~li~D~a~~~---~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~ 146 (307)
|.+.+ +++|.++|++||+++|+|++|+. +.......++...-+.|+||.++ +|+++|+++++++ +.+.+.
T Consensus 213 G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~t~sK~~~--~G~~~G~~~~~~~-~~~~~~ 289 (427)
T 3fq8_A 213 GFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAYGGVQEKFGVTPDLTTLGKIIG--GGLPVGAYGGKRE-IMQLVA 289 (427)
T ss_dssp SCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTHHHHHTTCCCSEEEECGGGG--TTSSCEEEEECHH-HHTTBT
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchhhHhcCCCCChhhhhhhhh--CCcceEEEEEcHH-HHHhhc
Confidence 99998 99999999999999999999972 11111112333223467889995 4889999988754 433332
Q ss_pred HHHH-hcC--CCCChhhHHHHhhccccH--HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCc
Q 021783 147 FLQN-AEG--SGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 221 (307)
Q Consensus 147 ~~~~-~~~--~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 221 (307)
.... ..+ ...++..+..+.++++.+ +...++..++.+.+.+.+++... . .. +. ...++.+.
T Consensus 290 ~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~--~~-~~---------~~~~~~g~ 355 (427)
T 3fq8_A 290 PAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQ--E--TG-HA---------ACGGQVSG 355 (427)
T ss_dssp TTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHH--H--TT-CC---------CEEEEETT
T ss_pred cCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH--h--CC-CC---------eEEEEeee
Confidence 2111 111 223455555555555322 22334445555555555543210 0 00 00 00122466
Q ss_pred eEEEEeCC-------------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec-
Q 021783 222 VLSFLTGS-------------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG- 287 (307)
Q Consensus 222 ~~~~~~~~-------------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~- 287 (307)
++++.+.. .+....+.+.+.++||.++.+... ++|++..
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~~---------------------------r~~~~~~~ 408 (427)
T 3fq8_A 356 MFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQFE---------------------------AGFTSLAH 408 (427)
T ss_dssp EEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTTS---------------------------CEECCTTC
T ss_pred EEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCCC---------------------------CEEeeCcC
Confidence 77777632 222467777888889988875531 1444332
Q ss_pred -cCChHHHHHHHHHHHhc
Q 021783 288 -IEDVNDLISDLDKALRT 304 (307)
Q Consensus 288 -~~~~~~~i~~l~~~l~~ 304 (307)
.+++++.++.|.+++++
T Consensus 409 t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 409 TEEDIDATLAAARTVMSA 426 (427)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 26788888888888765
No 221
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.74 E-value=1.1e-17 Score=148.09 Aligned_cols=249 Identities=13% Similarity=0.085 Sum_probs=147.3
Q ss_pred CCCCeEEEcCCCCcchHHHHh----------------hhcccCCcEEEEecCCChHHHHhhcC---CCceEEEEeCCCCC
Q 021783 12 GTGEEIVAGDDLYGGTDRLLS----------------RVTPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNP 72 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~----------------~~~~~~g~~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~ 72 (307)
.++++|++.++.|.+...... .........+..++.+|++++++.++ +++++|++++++++
T Consensus 133 ~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~ 212 (429)
T 4e77_A 133 TGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGN 212 (429)
T ss_dssp HCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCT
T ss_pred hCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCC
Confidence 357789988888876652100 00011122456677789999999886 46778887777777
Q ss_pred cccccc----HHHHHHHHHHcCCEEEEeCccC---CCCcCCccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHH
Q 021783 73 RQQICD----IRKIAEMAHAHGALLLVDNSIM---SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 145 (307)
Q Consensus 73 tG~~~~----~~~l~~~~~~~~~~li~D~a~~---~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~ 145 (307)
+|.+.+ +++|.++|++||+++|+|++|+ .+.......++.+.-+.|++|.++ +|+++|+++++++ +.+.+
T Consensus 213 ~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~~~~~~~~~~~pdi~t~sK~~~--~G~~~G~~~~~~~-~~~~l 289 (429)
T 4e77_A 213 MNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYHVIPDLTCLGKIIG--GGMPVGAFGGRRE-VMNAL 289 (429)
T ss_dssp TSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBTTCHHHHTTCCCSEEEEEGGGG--TTSCCEEEEECHH-HHTTB
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCcchHHHhcCCCCCeeeeccccc--CCCCeEEEEECHH-HHHHh
Confidence 788877 9999999999999999999998 222221222333222358899995 4788999998754 43333
Q ss_pred HHHH---HhcCCCCChhhHHHHhhccccH--HHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCC
Q 021783 146 YFLQ---NAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 220 (307)
Q Consensus 146 ~~~~---~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 220 (307)
.... .......++..+..+.++++.+ ....++..++.+.+.+.|++... . .+... ..++.+
T Consensus 290 ~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~--~~~~~----------~~~~~g 355 (429)
T 4e77_A 290 APTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAK--E--ENIPL----------VVNHVG 355 (429)
T ss_dssp TTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHH--H--TTCCC----------EEEEET
T ss_pred ccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH--h--CCCce----------EEEEee
Confidence 2110 1112234555566555555432 22334445555555555543200 0 00000 112346
Q ss_pred ceEEEEeCCH--------------HHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEe
Q 021783 221 SVLSFLTGSL--------------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 286 (307)
Q Consensus 221 ~~~~~~~~~~--------------~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 286 (307)
.++++.+.+. .....+.+.+..+||.++.+... .+|++.
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~---------------------------~~~~~~ 408 (429)
T 4e77_A 356 GMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSAFE---------------------------AGFMSL 408 (429)
T ss_dssp TEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSSTTS---------------------------CEECCT
T ss_pred eEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeecCCC---------------------------CEEEec
Confidence 7777777432 23477888888889988876431 144443
Q ss_pred c--cCChHHHHHHHHHHHhc
Q 021783 287 G--IEDVNDLISDLDKALRT 304 (307)
Q Consensus 287 ~--~~~~~~~i~~l~~~l~~ 304 (307)
. .+++++.++.|.+++++
T Consensus 409 ~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 409 AHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp TCCHHHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHHHHHh
Confidence 2 27888888888888765
No 222
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.74 E-value=2.7e-17 Score=147.14 Aligned_cols=264 Identities=16% Similarity=0.106 Sum_probs=146.9
Q ss_pred HHHHHhcCC-----C----CeEEEcCCCCcchHHHHhhhcccCCcEEEEe------c------C---CChHHHHhhcC--
Q 021783 5 AAVTHLLGT-----G----EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV------N------T---CDLDEVASAIG-- 58 (307)
Q Consensus 5 ~~~~~~~~~-----g----d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v------~------~---~d~~~l~~~l~-- 58 (307)
.++..++++ | |+|+++ +.|...... .....|+.+... + . .|+++|+++++
T Consensus 104 ~al~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~ 179 (467)
T 2oqx_A 104 IYIPVLIKKREQEKGLDRSKMVAFS-NYFFDTTQG---HSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEV 179 (467)
T ss_dssp HHHHHHHHHHHHHHCCCTTTCEEEE-SSCCHHHHH---HHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHH
T ss_pred HHHHHHhccccccCCCCccceEEec-ccccccchh---hhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhc
Confidence 555556677 8 998887 455443221 112234444322 1 1 27899999997
Q ss_pred --CCceEEEEeCCCCCc-ccccc---HHHHHHHHHHcCCEEEEeCccCC-----------CCcC-CccC------CCccE
Q 021783 59 --PWTKLVWVESPTNPR-QQICD---IRKIAEMAHAHGALLLVDNSIMS-----------PVLS-RPLE------LGADI 114 (307)
Q Consensus 59 --~~~~~v~~~~~~n~t-G~~~~---~~~l~~~~~~~~~~li~D~a~~~-----------~~~~-~~~~------~~~d~ 114 (307)
+++++|++++++||+ |.+++ +++|.++|++||+++|+|++++. +... .... ...|+
T Consensus 180 ~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ 259 (467)
T 2oqx_A 180 GPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADM 259 (467)
T ss_dssp CGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSE
T ss_pred CCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCe
Confidence 379999999999998 77754 88999999999999999977654 1111 1111 23678
Q ss_pred EEeccccccccCCCceeEEEEEcCh---hHHHHHHHHH-HhcCC----CCChhhHHHHhhcccc-H-HHHHHHHHHHHHH
Q 021783 115 VMHSATKFIAGHSDVMAGVLAVKGE---RLAKELYFLQ-NAEGS----GLAPFDCWICLRGVKT-M-ALRVEKQQDNAQK 184 (307)
Q Consensus 115 ~~~s~~K~~~g~~g~~~G~~~~~~~---~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~ 184 (307)
++.|+||+++.+- +|+++++++ .....+.... ...+. ............+++. + ...+++..++.+.
T Consensus 260 ~~~s~sK~~g~~~---Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~~~~~~~~~~~~~~ 336 (467)
T 2oqx_A 260 LAMSAKKDAMVPM---GGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQY 336 (467)
T ss_dssp EEEESSSTTCCSS---CEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred EEEecccccCCCC---ceEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhhHHHHHHHHHHHHH
Confidence 8999999995432 588888766 2222222221 11111 1111111111111111 1 1234445566777
Q ss_pred HHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC----C---HHH-HHHHHhcC-CcceeecCCCCccce
Q 021783 185 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG----S---LAL-SKHVVETT-KYFSITVSFGSVKSL 255 (307)
Q Consensus 185 l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~-~~~~~~~l-~~~gi~v~~g~~~~~ 255 (307)
+.+.|++. ++.. . + . .+.++++.+. + .+. ...+.+.| ...||.+++++.+..
T Consensus 337 l~~~L~~~-~~~~-~-~---------------~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~ 397 (467)
T 2oqx_A 337 LVDGLEEI-GVVC-Q-Q---------------A-GGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLL 397 (467)
T ss_dssp HHHHHHHT-TCCE-E-E---------------E-CSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHH
T ss_pred HHHHHHHC-CCee-e-c---------------C-CceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccc
Confidence 77777654 2211 1 1 1 2445666652 1 111 45567777 778998876443110
Q ss_pred eecccccCCCCCcHHHHHhcCCCCCeEEEEeccC-----ChHHHHHHHHHHHhc
Q 021783 256 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE-----DVNDLISDLDKALRT 304 (307)
Q Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~-----~~~~~i~~l~~~l~~ 304 (307)
-..|. + .. .....++++|++++.. ++++.++.|.+++++
T Consensus 398 ~~~~~---~-g~------~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~ 441 (467)
T 2oqx_A 398 GRDPK---T-GK------QLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_dssp CBCTT---T-CS------BCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHS
T ss_pred ccccc---c-cc------cccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhh
Confidence 00000 0 00 0001247899999854 777777777777654
No 223
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.74 E-value=3e-17 Score=146.16 Aligned_cols=246 Identities=16% Similarity=0.194 Sum_probs=147.1
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcc----------cCCcEEEEecCC----C-------------hHHHHhhcCC-CceEE
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTP----------KTGVVVKRVNTC----D-------------LDEVASAIGP-WTKLV 64 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~----------~~g~~~~~v~~~----d-------------~~~l~~~l~~-~~~~v 64 (307)
.+++|++.+++|.+.......... .....+..++.. | ++.+++.+.+ ++++|
T Consensus 150 g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aav 229 (453)
T 4ffc_A 150 GRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAI 229 (453)
T ss_dssp CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEE
T ss_pred CCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 468999999998866533222111 111134444443 3 3667777764 45566
Q ss_pred EEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCCccEEEeccccccccCCCceeEEEEE
Q 021783 65 WVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAV 136 (307)
Q Consensus 65 ~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~ 136 (307)
+++..+++.|...+ +++|.++|++||+++|+||+|. .+... ....++....+.+++|.++ . |+++|++++
T Consensus 230 i~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~~~-~-G~~~G~~~~ 307 (453)
T 4ffc_A 230 IIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKGIA-G-GMPLSAVTG 307 (453)
T ss_dssp EECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGG-T-TSSCEEEEE
T ss_pred EEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhhhc-C-CcCeEEEEE
Confidence 66655555566665 9999999999999999999996 22221 1222344333557889994 4 789999998
Q ss_pred cChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhc----CCCccEEecCCCCCCCchH
Q 021783 137 KGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHE 210 (307)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~~~~~~l~~~~~~~ 210 (307)
+++ +.+.+...........++..+..+.+.++.+.. ..++..+..+.+.+.+++ .+.+.
T Consensus 308 ~~~-i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-------------- 372 (453)
T 4ffc_A 308 RAE-LMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIG-------------- 372 (453)
T ss_dssp EHH-HHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEE--------------
T ss_pred CHH-HHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeE--------------
Confidence 754 433333222222334455666666666553321 233334444444444432 22111
Q ss_pred HHhhhccCCCceEEEEeC-------CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEE
Q 021783 211 LHYSQAKGAGSVLSFLTG-------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVR 283 (307)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iR 283 (307)
..++.+.++++.+. +.+....+.+.+.++||.+.++.. ..+++|
T Consensus 373 ----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-------------------------~~~~iR 423 (453)
T 4ffc_A 373 ----EVRGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGT-------------------------FGNVIR 423 (453)
T ss_dssp ----EEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECT-------------------------TSCEEE
T ss_pred ----EEEeeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCC-------------------------CCCEEE
Confidence 11334678888772 344577888888888998876442 134699
Q ss_pred EEecc----CChHHHHHHHHHHHhc
Q 021783 284 ISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 284 is~~~----~~~~~~i~~l~~~l~~ 304 (307)
++++. +++++.++.|.+++++
T Consensus 424 i~~~~~~t~e~i~~~l~~l~~~l~~ 448 (453)
T 4ffc_A 424 LLPPLVIGDDLLDEGITALSDIIRA 448 (453)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHH
Confidence 98764 6788888888887764
No 224
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.72 E-value=6.1e-17 Score=149.43 Aligned_cols=180 Identities=11% Similarity=0.025 Sum_probs=127.7
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC---------------ChHHHHhhcC--CCce---EE
Q 021783 5 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---------------DLDEVASAIG--PWTK---LV 64 (307)
Q Consensus 5 ~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---------------d~~~l~~~l~--~~~~---~v 64 (307)
+++.++++|||+|+++.++|.++. ..+...|+++++++.. |++++++++. ++++ ++
T Consensus 226 ~ai~al~~pGD~VLv~r~~H~S~~----~~l~lsGa~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~v 301 (715)
T 3n75_A 226 IVGMYSAPAGSTILIDRNCHKSLT----HLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHA 301 (715)
T ss_dssp HHHHHHCCTTCEEEEESSCCHHHH----HHHHHSCCEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEE
T ss_pred HHHHHhCCCCCEEEECCCccHHHH----HHHHHcCCEEEEEeccccccccccCcccccCCHHHHHHHHhhCcCccCceEE
Confidence 677789999999999999999988 5567889999998852 7899999986 3444 89
Q ss_pred EEeCCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCC-----cC--CccCCC--ccEE---EeccccccccCCCceeE
Q 021783 65 WVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-----LS--RPLELG--ADIV---MHSATKFIAGHSDVMAG 132 (307)
Q Consensus 65 ~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~-----~~--~~~~~~--~d~~---~~s~~K~~~g~~g~~~G 132 (307)
++++| |++|.+.|+++|.++|++++ +++|+||+.+. .+ .....+ .|++ ++|+||+++|+++ +|
T Consensus 302 ivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltq--gs 376 (715)
T 3n75_A 302 VITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQ--AS 376 (715)
T ss_dssp EEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTT--CE
T ss_pred EEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccCCccccccccccCcCCCEEEEEEecccccccCCCC--ee
Confidence 99999 89999999999999998764 79999998653 11 112222 5665 9999999988766 89
Q ss_pred EEEEcChhHHHHHHHHHHhcC-CCCChhhHHHHhhccc-----cHHHHHHHHHHHHHHHHHHHhcCC
Q 021783 133 VLAVKGERLAKELYFLQNAEG-SGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHP 193 (307)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~ 193 (307)
++.++++.....+........ ++++.........+++ .-...+++..++++.+++.+++.+
T Consensus 377 ~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~ 443 (715)
T 3n75_A 377 MIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLR 443 (715)
T ss_dssp EEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhh
Confidence 999986643444444443333 3333332222222332 123456677777777777776543
No 225
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.72 E-value=3.4e-17 Score=146.66 Aligned_cols=244 Identities=18% Similarity=0.196 Sum_probs=150.2
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcc-----------cCCcEEEEecC-----C-C--------hHHHHhhcC----CCceE
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTP-----------KTGVVVKRVNT-----C-D--------LDEVASAIG----PWTKL 63 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~-----------~~g~~~~~v~~-----~-d--------~~~l~~~l~----~~~~~ 63 (307)
.+++|++.++.|.+.......... ..|...+..|. + | +++|++.+. +++++
T Consensus 145 ~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aa 224 (476)
T 3i5t_A 145 QKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAA 224 (476)
T ss_dssp TCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEE
T ss_pred CCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 367999999999876533211111 12233333332 1 1 778888875 56789
Q ss_pred EEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---Ccc-CCC--ccEEEeccccccccCCC-cee
Q 021783 64 VWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPL-ELG--ADIVMHSATKFIAGHSD-VMA 131 (307)
Q Consensus 64 v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~-~~~--~d~~~~s~~K~~~g~~g-~~~ 131 (307)
|+++++++++|...+ +++|.++|++||+++|+||+|+ .+... ... .++ .|++ +++|.+++ | +++
T Consensus 225 vi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~--t~sK~l~~--G~~pl 300 (476)
T 3i5t_A 225 FLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDII--TFAKGVTS--GYVPL 300 (476)
T ss_dssp EEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEE--EECGGGGT--TSSCC
T ss_pred EEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchh--hhhhhhcC--CCcCe
Confidence 999999999998665 9999999999999999999997 32221 112 333 4555 57899964 6 789
Q ss_pred EEEEEcChhHHHHHHHH-------HHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEecCC
Q 021783 132 GVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAG 202 (307)
Q Consensus 132 G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 202 (307)
|+++++++ +.+.+... ........++..+..+.++++.+.. ..++..++.+.+.+.|+...
T Consensus 301 g~v~~~~~-i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~--------- 370 (476)
T 3i5t_A 301 GGLAISEA-VLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLR--------- 370 (476)
T ss_dssp EEEEECHH-HHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTT---------
T ss_pred EEEEECHH-HHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh---------
Confidence 99999754 54444322 1112234455666666666654432 23444555555666665321
Q ss_pred CCCCCchHHHhhhccCCCceEEEEeCCHH-----------HHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHH
Q 021783 203 LPEHPGHELHYSQAKGAGSVLSFLTGSLA-----------LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEV 271 (307)
Q Consensus 203 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~ 271 (307)
.+|.+. ..++.+.++.+.+.... ....+.+.+.++|+.+++.
T Consensus 371 --~~~~v~----~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~--------------------- 423 (476)
T 3i5t_A 371 --DLPGVA----ETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPL--------------------- 423 (476)
T ss_dssp --TSTTEE----EEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEE---------------------
T ss_pred --cCCCeE----EEEecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEec---------------------
Confidence 111111 11335778788774321 2566777777788876541
Q ss_pred HHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 272 RQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 272 ~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
| +++||++++ +++++.++.|.+++++
T Consensus 424 ----g---~~iRi~p~l~~t~e~i~~~l~~l~~~l~~ 453 (476)
T 3i5t_A 424 ----G---DLCVISPPLIISRAQIDEMVAIMRQAITE 453 (476)
T ss_dssp ----T---TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ----C---CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 459999654 7888888888887753
No 226
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.71 E-value=2.7e-17 Score=147.08 Aligned_cols=245 Identities=16% Similarity=0.120 Sum_probs=148.8
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcc----------cCCcEEEEecC----C---C--------hHHHHhhcC----CCceE
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTP----------KTGVVVKRVNT----C---D--------LDEVASAIG----PWTKL 63 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~----------~~g~~~~~v~~----~---d--------~~~l~~~l~----~~~~~ 63 (307)
++++|++.++.|.+.......... ..++..+..|. + | +++|++.+. +++++
T Consensus 147 ~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aa 226 (472)
T 3hmu_A 147 EKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVAA 226 (472)
T ss_dssp TCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEE
T ss_pred CCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 478999999999876532211110 11333333222 1 1 778888875 56788
Q ss_pred EEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCC--ccEEEeccccccccCCCceeEE
Q 021783 64 VWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELG--ADIVMHSATKFIAGHSDVMAGV 133 (307)
Q Consensus 64 v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~--~d~~~~s~~K~~~g~~g~~~G~ 133 (307)
|+++.+++++|.+.+ +++|.++|++||+++|+||+|. .|... ....++ .|++ +++|.+++ .++++|+
T Consensus 227 vi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~--t~sK~l~g-g~~plG~ 303 (472)
T 3hmu_A 227 FIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIM--TIAKGLSS-GYAPIGG 303 (472)
T ss_dssp EEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE--EECGGGTT-TSSCCEE
T ss_pred EEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCcee--eechhhhc-CCcceEE
Confidence 889899999999886 9999999999999999999997 32221 111223 4555 57899854 3467899
Q ss_pred EEEcChhHHHHHHHH--HHhcCCCCChhhHHHHhhccccHHH--HHHHHH-HHHHHHHHHHhcCCCccEEecCCCCCCCc
Q 021783 134 LAVKGERLAKELYFL--QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQ-DNAQKIAEFLASHPRVKKVNYAGLPEHPG 208 (307)
Q Consensus 134 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~-~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 208 (307)
++++++ +.+.+... ........++..+..+.++++.++. ..++.. ++.+.+.+.|+... ..|.
T Consensus 304 v~~~~~-i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~-----------~~~~ 371 (472)
T 3hmu_A 304 SIVCDE-VAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALT-----------DHPL 371 (472)
T ss_dssp EEEEHH-HHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGG-----------GSTT
T ss_pred EEECHH-HHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-----------cCCC
Confidence 999754 44444211 1111223455666666666654422 233444 45555666554321 0111
Q ss_pred hHHHhhhccCCCceEEEEeCC------------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcC
Q 021783 209 HELHYSQAKGAGSVLSFLTGS------------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 276 (307)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~ 276 (307)
+. ..++.+.++.+.+.. ......+.+.+.++||.++.++
T Consensus 372 v~----~vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g------------------------- 422 (472)
T 3hmu_A 372 VG----EAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG------------------------- 422 (472)
T ss_dssp EE----EEEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET-------------------------
T ss_pred eE----EEEecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecC-------------------------
Confidence 10 113357788888742 1225677777877888765421
Q ss_pred CCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 277 LTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 277 ~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+++|+++.+ +++++.++.|.+++++
T Consensus 423 ---~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 451 (472)
T 3hmu_A 423 ---DRMIISPPLVITPAEIDEMFVRIRKSLDE 451 (472)
T ss_dssp ---TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 359999654 6788888888777753
No 227
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.71 E-value=8.2e-17 Score=142.24 Aligned_cols=220 Identities=16% Similarity=0.132 Sum_probs=133.0
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhc----------ccCCc------EEEEecCCChHHHHhhcC---CCceEEEEeCCCCC
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVT----------PKTGV------VVKRVNTCDLDEVASAIG---PWTKLVWVESPTNP 72 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~----------~~~g~------~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~ 72 (307)
.++++|++.+++|++......... ...|+ ++..++.+|++++++.++ +++++|++++.+++
T Consensus 132 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~ 211 (424)
T 2e7u_A 132 TGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEYNDPEGLREVLKRRGEEIAAIIFEPVVGN 211 (424)
T ss_dssp HCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCT
T ss_pred hCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCCCCHHHHHHHHHhCCCCEEEEEEeCCCCC
Confidence 346889999999877542110000 01232 466777789999999886 46777777666666
Q ss_pred cccccc----HHHHHHHHHHcCCEEEEeCccCCCCcCC---ccCCC--ccEEEeccccccccCCCceeEEEEEcChhHHH
Q 021783 73 RQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLSR---PLELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 143 (307)
Q Consensus 73 tG~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~~---~~~~~--~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~ 143 (307)
+|.+.+ +++|.++ ++||+++|+|++|+...... ...++ .|+ .|++|+++ . |+++|+++++++ +.+
T Consensus 212 ~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di--~s~sK~l~-~-G~~~G~~~~~~~-~~~ 285 (424)
T 2e7u_A 212 AGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAFGGATELLGLKPDL--VTLGKILG-G-GLPAAAYAGRRE-IME 285 (424)
T ss_dssp TSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSSTTHHHHHHTCCCSE--EEECGGGG-T-TSSCEEEEECHH-HHT
T ss_pred CCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccchhHHHHHhCCCcch--hhhhhhhh-C-CcceEEEEEcHH-HHh
Confidence 998887 9999999 99999999999998221111 11123 454 48999995 3 788999999854 433
Q ss_pred HHHHHHH-hc--CCCCChhhHHHHhhccccHHH---HHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhcc
Q 021783 144 ELYFLQN-AE--GSGLAPFDCWICLRGVKTMAL---RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 217 (307)
Q Consensus 144 ~~~~~~~-~~--~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (307)
.+..... .. ....++..+..+.+.++.+.. ..++..++.+.+.+.+++... . ++ +. . ..+
T Consensus 286 ~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~--~~-~~-------~--~~~ 351 (424)
T 2e7u_A 286 KVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLK--E--KG-LP-------H--TVN 351 (424)
T ss_dssp TBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHH--H--TT-CC-------C--EEE
T ss_pred hhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH--h--CC-Cc-------e--EEE
Confidence 3322110 11 123445556666666654422 344455555555555553200 0 00 00 0 002
Q ss_pred CCCceEEEEeCC-------------HHHHHHHHhcCCcceeecCCCC
Q 021783 218 GAGSVLSFLTGS-------------LALSKHVVETTKYFSITVSFGS 251 (307)
Q Consensus 218 ~~~~~~~~~~~~-------------~~~~~~~~~~l~~~gi~v~~g~ 251 (307)
+.+.++++.+.+ ......+.+.+.++||.++.|.
T Consensus 352 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~ 398 (424)
T 2e7u_A 352 RVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSN 398 (424)
T ss_dssp EETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSS
T ss_pred eeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccC
Confidence 246788888753 2336678888888899888764
No 228
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.49 E-value=3.9e-18 Score=151.18 Aligned_cols=251 Identities=13% Similarity=0.082 Sum_probs=151.7
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCc--EEEEecCCChHHHHhhcC---CCceEEEEeCCCCCcccccc----HHHH
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKI 82 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~----~~~l 82 (307)
..+++|++.+++|.+.......-....|+ .+..++.+|++++++.++ +++++|+++.+++++|.+.+ +++|
T Consensus 180 tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l 259 (465)
T 2yky_A 180 TGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLL 259 (465)
Confidence 35689999999887654221100012344 455667789999999997 68899999887777998776 9999
Q ss_pred HHHHHHcCCEEEEeCccCCCCcC---CccCCCccEEEeccccccccCCCceeEEEEEcChhHHHHHHH-----HHHhcCC
Q 021783 83 AEMAHAHGALLLVDNSIMSPVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-----LQNAEGS 154 (307)
Q Consensus 83 ~~~~~~~~~~li~D~a~~~~~~~---~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~-----~~~~~~~ 154 (307)
.++|++||+++|+|++|+ +... ....+|....+.|++|++++ |+++|+++++++.. +.+.. .......
T Consensus 260 ~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~t~sK~lg~--G~piG~v~~~~~i~-~~l~~~~~g~~~~~~T~ 335 (465)
T 2yky_A 260 RAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLTTLGKYIGG--GMSFGAFGGRRDLM-ERFDPARDGAFAHAGTF 335 (465)
Confidence 999999999999999999 5321 12223444445689999954 78899999986643 33332 1111222
Q ss_pred CCChhhHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCC-----
Q 021783 155 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS----- 229 (307)
Q Consensus 155 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----- 229 (307)
..++..+..+.+.++.+.. +.+.++..++.+++.+.-. .. ....+ +. ...++.|.++++.+.+
T Consensus 336 ~~npla~aAa~aaL~~l~~--~~~~~~~~~~~~~l~~~L~--~~----~~~~~---~~-~~v~g~G~~~~i~~~~~~~~~ 403 (465)
T 2yky_A 336 NNNILTMSAGHAALTQIYT--RQAASDLSASGDRFRANLN--RI----AVENQ---AP-LQFTGLGSLGTIHFSRAPIRS 403 (465)
Confidence 3344555555555654422 2233333333333332210 00 01111 00 0123457788887643
Q ss_pred --------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHH
Q 021783 230 --------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKA 301 (307)
Q Consensus 230 --------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~ 301 (307)
.+....+.+.+.++||.+.++.... | -+....+++++.++.|.++
T Consensus 404 ~~~~~~~d~~~~~~~~~~ll~~GV~v~p~~~~~----~-----------------------s~~~t~edid~~l~~l~~~ 456 (465)
T 2yky_A 404 AGDVRAADQQLKELFFFHMLRKGIYLAPRGMYA----L-----------------------SLEIADAGRDAFAEALADF 456 (465)
Confidence 1125667888888999887654211 1 1223347899999999888
Q ss_pred HhcC
Q 021783 302 LRTG 305 (307)
Q Consensus 302 l~~~ 305 (307)
++++
T Consensus 457 l~~~ 460 (465)
T 2yky_A 457 IGEQ 460 (465)
Confidence 7654
No 229
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.66 E-value=7.7e-15 Score=126.17 Aligned_cols=186 Identities=19% Similarity=0.198 Sum_probs=118.2
Q ss_pred cHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hhcccCCc--EEEEecC------CChHHHHhhcC-CCceEEEEeC
Q 021783 2 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLS----RVTPKTGV--VVKRVNT------CDLDEVASAIG-PWTKLVWVES 68 (307)
Q Consensus 2 aal~~~~~~~~~gd~Vlv~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~------~d~~~l~~~l~-~~~~~v~~~~ 68 (307)
|++++++++++|||+|+..+..+++...--. ......|. +.+..+. .|.+++++... .++++|++-.
T Consensus 132 AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~ 211 (490)
T 3ou5_A 132 ANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGT 211 (490)
T ss_dssp HHHHHHHHHCC-CCCEECBC----------------------------CBCEETTTTEECHHHHHHHHHHHCCSEEEECC
T ss_pred HHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECC
Confidence 5668899999999999988887766542100 00111122 2222221 27888887765 5889999876
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeCccC-----CCCcCCccCCCccEEEeccccccccCCCceeEEEEEcCh----
Q 021783 69 PTNPRQQICDIRKIAEMAHAHGALLLVDNSIM-----SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE---- 139 (307)
Q Consensus 69 ~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~-----~~~~~~~~~~~~d~~~~s~~K~~~g~~g~~~G~~~~~~~---- 139 (307)
..+| ...|.+++.++|++.|+++++|.+|- .|..+++..+ +|++++|+||++.||+ +|+++++++
T Consensus 212 SaY~--r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~-ADvVTtTTHKTLrGPr---GG~Il~~~~~~~~ 285 (490)
T 3ou5_A 212 SAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH-ADIVTTTTHKTLRGAR---SGLIFYRKGVKAV 285 (490)
T ss_dssp SSCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-CSEEEEESSSTTCSCS---CEEEEEECSEEEE
T ss_pred ccCc--cccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc-ceEEeccccccccCCC---ceEEEeccccccc
Confidence 5554 77899999999999999999999994 5677888876 9999999999998887 799999863
Q ss_pred ----------hHHHHHHHHHH-hcCCCCC--hhhHH---HHhhccccHHHHHHHHHHHHHHHHHHHhcCC
Q 021783 140 ----------RLAKELYFLQN-AEGSGLA--PFDCW---ICLRGVKTMALRVEKQQDNAQKIAEFLASHP 193 (307)
Q Consensus 140 ----------~~~~~~~~~~~-~~~~~~~--~~~~~---~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~ 193 (307)
++.+.+...-- ..-+.+. ..++. +..+.-..+....++..+|++.|.+.|..+.
T Consensus 286 ~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G 355 (490)
T 3ou5_A 286 DPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERG 355 (490)
T ss_dssp CC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 23333433321 1111111 11111 2222234567778889999999999998763
No 230
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.65 E-value=3.2e-16 Score=135.20 Aligned_cols=183 Identities=11% Similarity=0.057 Sum_probs=125.7
Q ss_pred HHHHHHhcCC----CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC--------ChHHHHhhcCC---CceEEE-Ee
Q 021783 4 LAAVTHLLGT----GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAIGP---WTKLVW-VE 67 (307)
Q Consensus 4 l~~~~~~~~~----gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--------d~~~l~~~l~~---~~~~v~-~~ 67 (307)
++++++.+++ ||+|+++..+|.+.. ..+...|+++++++.. |+++++++|.. +..+++ .+
T Consensus 148 lamilaa~r~~rpg~d~VIvpRn~HKSv~----kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~T 223 (501)
T 3hl2_A 148 LTLCFLTLRHKRPKAKYIIWPRIDQKSCF----KSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHST 223 (501)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECCCCHHHH----HHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEE
T ss_pred HHHHHHHcCcccCCCCEEEEecchHHHHH----HHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEec
Confidence 4666665553 499999999999999 6677899999999861 88999999862 333444 44
Q ss_pred CCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCCcC------CccCCC-ccEEEeccccccccCCCceeEEEEEcChh
Q 021783 68 SPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS------RPLELG-ADIVMHSATKFIAGHSDVMAGVLAVKGER 140 (307)
Q Consensus 68 ~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~------~~~~~~-~d~~~~s~~K~~~g~~g~~~G~~~~~~~~ 140 (307)
.+.|..+.+.|+++|+++|++||+++++|+||+..... .....| +|+++.|.||++..|-| +|++..+++.
T Consensus 224 tt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIG--G~ii~~~d~e 301 (501)
T 3hl2_A 224 TSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVG--GAIIAGFNDS 301 (501)
T ss_dssp CSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSS--CEEEEESCHH
T ss_pred CCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceeecC--ceEEEeCCHH
Confidence 44453456679999999999999999999999864421 233457 99999999999877665 6677777765
Q ss_pred HHHHHHHHHHhcCCCCChhhHHHH--hhccccHHHHHHHHHHHHHHHHHHHhcC
Q 021783 141 LAKELYFLQNAEGSGLAPFDCWIC--LRGVKTMALRVEKQQDNAQKIAEFLASH 192 (307)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~l~~~l~~~ 192 (307)
..+.+....+...++.+....|+. ..+.+.++..+++..++++.+.+.+++.
T Consensus 302 ~l~~~~~~yPGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~l 355 (501)
T 3hl2_A 302 FIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKL 355 (501)
T ss_dssp HHHHHHHTSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544432211111111122223333 2344566667777778888888877754
No 231
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.65 E-value=1.2e-15 Score=136.48 Aligned_cols=206 Identities=15% Similarity=0.139 Sum_probs=123.9
Q ss_pred ChHHHHhhcCC------CceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCCcC---CccCCC---
Q 021783 49 DLDEVASAIGP------WTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELG--- 111 (307)
Q Consensus 49 d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~~~---~~~~~~--- 111 (307)
|+++|++.+++ ++++|++++++|++|.+.+ +++|.++|++||+++|+|++|+ .|... ....+|
T Consensus 241 d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~ 320 (472)
T 1ohv_A 241 CLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDD 320 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSS
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCC
Confidence 57888888874 8999999988899998877 9999999999999999999997 33321 222334
Q ss_pred -ccEEEeccccc-cccCCCceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHH
Q 021783 112 -ADIVMHSATKF-IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAE 187 (307)
Q Consensus 112 -~d~~~~s~~K~-~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~ 187 (307)
.|+ .|++|. ++ +|+++ +++ +.. +...........++..+..+.++++.+.. ..++..+..+.+.+
T Consensus 321 ~~Di--~t~sK~~l~------GG~~~-~~~-~~~-~~~~~~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 389 (472)
T 1ohv_A 321 PADV--MTFSKKMMT------GGFFH-KEE-FRP-NAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLT 389 (472)
T ss_dssp CCSE--EEECGGGSS------EEEEE-CGG-GSC-SSSSSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCE--EEEcccccc------CCccC-chh-hcc-cccccccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 455 478898 43 47766 433 321 11111111123345555555555554322 22333444444444
Q ss_pred HHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCC
Q 021783 188 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 267 (307)
Q Consensus 188 ~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~ 267 (307)
.|+... . .++. ... ..++.+.++.|.+.+......+.+.|.++||.+.++.
T Consensus 390 ~L~~l~---~-~~~~--~v~-------~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---------------- 440 (472)
T 1ohv_A 390 GLLDLQ---A-RYPQ--FIS-------RVRGRGTFCSFDTPDESIRNKLISIARNKGVMLGGCG---------------- 440 (472)
T ss_dssp HHHHHH---H-HCTT--TCE-------EEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEET----------------
T ss_pred HHHHHH---h-hCCC--cEE-------eecCCceEEEEEeCChhHHHHHHHHHHHCCeEEecCC----------------
Confidence 444220 0 0010 000 0123467888887655456778888877888765421
Q ss_pred cHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 268 PVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 268 ~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
+++||++++. +++++.++.|.++++++
T Consensus 441 -----------~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 441 -----------DKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp -----------TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred -----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3459998875 66777777777776654
No 232
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.63 E-value=1.2e-15 Score=133.17 Aligned_cols=175 Identities=12% Similarity=0.054 Sum_probs=119.8
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC--------ChHHHHhhcCC---CceEEEEeCC-CCCccccccHH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLDEVASAIGP---WTKLVWVESP-TNPRQQICDIR 80 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--------d~~~l~~~l~~---~~~~v~~~~~-~n~tG~~~~~~ 80 (307)
+++.|+++..+|.+.. .++...|+.+++++.. |+++++++|.. +.+++++.++ ++.+|.+.|++
T Consensus 143 ~~~~viv~r~aHkSv~----kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~ 218 (450)
T 3bc8_A 143 KAKYIIWPRIDQKSCF----KSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLE 218 (450)
T ss_dssp TCCEEEEECCCCHHHH----HHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHH
T ss_pred CCCEEEEECCcHHHHH----HHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHH
Confidence 3899999999999988 7788899999998761 89999999962 3345555544 44456888999
Q ss_pred HHHHHHHHcCCEEEEeCccCCCCcC------CccCC-CccEEEeccccccccCCCceeEEEEEcChhHHHHHHHHHHhcC
Q 021783 81 KIAEMAHAHGALLLVDNSIMSPVLS------RPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 153 (307)
Q Consensus 81 ~l~~~~~~~~~~li~D~a~~~~~~~------~~~~~-~~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~~~~~~~ 153 (307)
+|+++|++||+++++|+||+..... ..... ++|+++.|+||++..+.+ ++++..+++...+..........
T Consensus 219 ~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~--~~~l~~rd~~~~~~~~~~~~g~~ 296 (450)
T 3bc8_A 219 ELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVG--GAIIAGFNEPFIQDISKMYPGRA 296 (450)
T ss_dssp HHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCCSS--CEEEEESCHHHHHHHHHHSCSCB
T ss_pred HHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEEECCccCCCchhc--cEEEEecCHHHHHHHHHHhhcCC
Confidence 9999999999999999999854321 11222 799999999999988877 88888876655443322211111
Q ss_pred CCCChhhHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcCC
Q 021783 154 SGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHP 193 (307)
Q Consensus 154 ~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~l~~~~ 193 (307)
++.+....|..+. +.+.+...+++..+.++.+.+.+++..
T Consensus 297 s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~ 338 (450)
T 3bc8_A 297 SASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLA 338 (450)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 1212234443332 233444445555777777777776543
No 233
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.36 E-value=1.5e-12 Score=114.79 Aligned_cols=240 Identities=16% Similarity=0.131 Sum_probs=142.5
Q ss_pred CCCeEEEcCCCCcchHHHHhhh--cccCCcEEEEecCCChHHHHhhcC---CCceEEEEeCCCCCcccccc----HHHHH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRV--TPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIA 83 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~--~~~~g~~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~----~~~l~ 83 (307)
..++|+....+|.......... ..........+|.+|++.+++.+. +++.+|+++.++...|.+.+ +++|.
T Consensus 168 gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr 247 (454)
T 4ao9_A 168 GRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYNDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALR 247 (454)
T ss_dssp TCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTTCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHH
T ss_pred cCCeEEEEeCCcCCccccccccccCccCCCCcccCCCchHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHH
Confidence 3567877777776543110000 011234566778889999998886 57889999998888898876 99999
Q ss_pred HHHHHcCCEEEEeCccCCCCcCC---ccCCC--ccEEEeccccccccCCCceeEEEEEcChhHHHHHHH-HHH-hcCC--
Q 021783 84 EMAHAHGALLLVDNSIMSPVLSR---PLELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-LQN-AEGS-- 154 (307)
Q Consensus 84 ~~~~~~~~~li~D~a~~~~~~~~---~~~~~--~d~~~~s~~K~~~g~~g~~~G~~~~~~~~~~~~~~~-~~~-~~~~-- 154 (307)
++|++||+++|.||++. |.... ...+| .|++ ++.|.++| |+.+|.+.++++ +.+.+.. ... ..++
T Consensus 248 ~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~--t~gK~lgg--G~Piga~~~~~e-i~~~~~~~~~~~~h~~T~ 321 (454)
T 4ao9_A 248 ESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLT--TLGKYIGG--GMSFGAFGGRAD-VMALFDPRTGPLAHSGTF 321 (454)
T ss_dssp HHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEE--EEEGGGGT--TSSCEEEEECHH-HHGGGCTTTCSCCCCCTT
T ss_pred HHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEE--EeccccCC--CCcceeeeeHHH-HHHHHhhccCCccccCCC
Confidence 99999999999999996 32221 12234 4665 58898854 455899888854 4333321 100 0111
Q ss_pred CCChhhHHHHhhccccH--HHHHHHHHHHHHHHHHHHhcC----CCccEEecCCCCCCCchHHHhhhccCCCceEEEEeC
Q 021783 155 GLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 228 (307)
Q Consensus 155 ~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (307)
...+..+..+.+.++.+ +...++..+..+.+.+.|++. +.+.. .++.|.++.+.+.
T Consensus 322 ~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~------------------vrg~G~m~gi~f~ 383 (454)
T 4ao9_A 322 NNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQ------------------FTGIGSLMNAHFV 383 (454)
T ss_dssp TTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCE------------------EEEETTEEEEESC
T ss_pred CCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEE------------------EeeeceEEEEEEe
Confidence 23345555555555433 223344444455555555432 21111 1334666666552
Q ss_pred -------------CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEec--cCChHH
Q 021783 229 -------------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--IEDVND 293 (307)
Q Consensus 229 -------------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--~~~~~~ 293 (307)
+.+....+...+..+||.+.+... +.+|.. .+|+|+
T Consensus 384 ~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~p~~~-----------------------------~~~s~~~T~~dId~ 434 (454)
T 4ao9_A 384 QGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSSPRGF-----------------------------VVLSLPLTDADIDR 434 (454)
T ss_dssp CSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECCTTCE-----------------------------EECCTTCCHHHHHH
T ss_pred cCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEcCCCC-----------------------------EEEeCCCCHHHHHH
Confidence 122345566667778887765332 222222 268888
Q ss_pred HHHHHHHHHhcC
Q 021783 294 LISDLDKALRTG 305 (307)
Q Consensus 294 ~i~~l~~~l~~~ 305 (307)
.++.|.++|.+.
T Consensus 435 ~l~al~~~l~~~ 446 (454)
T 4ao9_A 435 YVAAIGSFIGGH 446 (454)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhc
Confidence 999998888654
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.29 E-value=1.8e-11 Score=108.25 Aligned_cols=206 Identities=17% Similarity=0.180 Sum_probs=124.1
Q ss_pred CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccCC----CCcCCccCCC--ccEEEeccccccccCCC
Q 021783 59 PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS----PVLSRPLELG--ADIVMHSATKFIAGHSD 128 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~~----~~~~~~~~~~--~d~~~~s~~K~~~g~~g 128 (307)
.++.+|+++..+...|.+.+ +++|.++|++||+++|.||++.. |.......+| .|+++ ++|.++| |
T Consensus 225 ~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt--~gK~lgg--g 300 (456)
T 4atq_A 225 DQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIIT--MAKGIAG--G 300 (456)
T ss_dssp GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEE--ECGGGGT--T
T ss_pred CceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhh--hhhcccC--c
Confidence 46889999998888888764 99999999999999999999863 3333333444 57765 6788853 4
Q ss_pred ceeEEEEEcChhHHHHHHHHHHhcCCCCChhhHHHHhhccccHHHHHHHHHHHHHHHHHH----HhcCCCccEEecCCCC
Q 021783 129 VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEF----LASHPRVKKVNYAGLP 204 (307)
Q Consensus 129 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~----l~~~~~~~~~~~~~l~ 204 (307)
..+|.++++++ +.+.+..........-.+..+..+.+.++.++. +++.++++.+.++ |++... + ++. .
T Consensus 301 ~P~~av~~~~~-i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~--~--~~~-~ 372 (456)
T 4atq_A 301 LPLSAITGRAD-LLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQ--HDLNGRARHIEELALGKLRELAA--E--LSA-G 372 (456)
T ss_dssp SSCEEEEEEHH-HHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHH--H--CC---
T ss_pred CCceeeEecHH-HHhcccccCCCCCCCCChHHHHhhHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHH--h--ccc-c
Confidence 56888888854 433332211222233445666776666665432 2233333333332 222100 0 000 0
Q ss_pred CCCchHHHhhhccCCCceEEEEeC-------CHHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCcHHHHHhcCC
Q 021783 205 EHPGHELHYSQAKGAGSVLSFLTG-------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 277 (307)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~ 277 (307)
.++. ....++.|.++.+.+. +.+....+.+.+.++|+.+.....
T Consensus 373 ~~~~----v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~------------------------- 423 (456)
T 4atq_A 373 GGSV----VGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCGT------------------------- 423 (456)
T ss_dssp ---C----EEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECT-------------------------
T ss_pred cCCc----eEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCC-------------------------
Confidence 0000 0012556778888772 334467788888888987653221
Q ss_pred CCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 278 TEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 278 ~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
..+.||+.+.+ +++++.++.|.++|++.
T Consensus 424 ~~~~irl~PpL~it~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 424 YGNVIRLLPPLVISDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp TSCEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 23458888765 77888888888888753
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.18 E-value=3.5e-11 Score=106.82 Aligned_cols=199 Identities=17% Similarity=0.194 Sum_probs=120.4
Q ss_pred CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEEEeCccC-C---CCcCCccCCC--ccEEEeccccccccCCC
Q 021783 59 PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-S---PVLSRPLELG--ADIVMHSATKFIAGHSD 128 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~---~~~~~~~~~~--~d~~~~s~~K~~~g~~g 128 (307)
+++.+|+++..+...|.+.+ +++|.++|++||+++|.||++. . |.......+| .|+++ ++|.+++ .+
T Consensus 235 ~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t--~~K~l~g-G~ 311 (473)
T 4e3q_A 235 DTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAII--SSKNLTA-GF 311 (473)
T ss_dssp GGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEE--ECGGGGT-TS
T ss_pred CceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChHH--hcccccC-CC
Confidence 46788999998888888764 9999999999999999999986 2 2222222334 56665 7898853 22
Q ss_pred ceeEEEEEcChhHHHHHHHHH-Hh----cC--CCCChhhHHHHhhccccHHH--HHHHHHHHHHHHHHHHhcCCCccEEe
Q 021783 129 VMAGVLAVKGERLAKELYFLQ-NA----EG--SGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVN 199 (307)
Q Consensus 129 ~~~G~~~~~~~~~~~~~~~~~-~~----~~--~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~ 199 (307)
+.+|.++++++ +.+.+.... .. .+ .+-.+..+..+.+.++.++. ..++..+....+.+.|++.
T Consensus 312 ~Pl~av~~~~~-i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l------- 383 (473)
T 4e3q_A 312 FPMGAVILGPE-LSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHI------- 383 (473)
T ss_dssp SCCEEEEECHH-HHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHH-------
T ss_pred CCcccccccHH-HHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHH-------
Confidence 55899998855 544443321 11 12 23345666676666665532 1222233333344433321
Q ss_pred cCCCCCCCchHHHhhhccCCCceEEEEeCC-----------HHHHHHHHhcCCcceeecCCCCccceeecccccCCCCCc
Q 021783 200 YAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIP 268 (307)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~gi~v~~g~~~~~~~~p~~~~~~~~~ 268 (307)
.+.|.+ ...++.|.++.+.+.. ......+.+.+.++|+.+++.+
T Consensus 384 ----~~~~~v----~~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g----------------- 438 (473)
T 4e3q_A 384 ----AERPNI----GEYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPLG----------------- 438 (473)
T ss_dssp ----TTSTTE----EEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEET-----------------
T ss_pred ----hcCCCe----eEEeecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEecC-----------------
Confidence 111111 1124567777777621 1235667777888888665321
Q ss_pred HHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 021783 269 VEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 304 (307)
Q Consensus 269 ~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 304 (307)
+.+|+++.+ +++|+.++.|.++|++
T Consensus 439 -----------~~i~l~PPL~it~~eid~~~~~l~~al~~ 467 (473)
T 4e3q_A 439 -----------QSVVLCPPFILTEAQMDEMFDKLEKALDK 467 (473)
T ss_dssp -----------TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----------CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 237777653 7888889888888865
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.11 E-value=9.3e-11 Score=110.92 Aligned_cols=202 Identities=12% Similarity=0.104 Sum_probs=120.5
Q ss_pred HHHHhhcC--------CCceEEEEeCC-CCCcccccc----HHHHHHHHHHcCCEEEEeCccC-CCC---cCCccCCC--
Q 021783 51 DEVASAIG--------PWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPV---LSRPLELG-- 111 (307)
Q Consensus 51 ~~l~~~l~--------~~~~~v~~~~~-~n~tG~~~~----~~~l~~~~~~~~~~li~D~a~~-~~~---~~~~~~~~-- 111 (307)
+.+++.+. .++++|+++.. ++..|...+ +++|.++|++||+++|+||++. .|. ......+|
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~ 656 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCK 656 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSC
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCC
Confidence 46777664 45789999986 888888875 9999999999999999999986 322 22222334
Q ss_pred ccEEEeccccccccCCC-ceeEEEEEcChhHHHHHHHHH------HhcCCCCChhhHHHHhhccccHHHHHHHHHHHHH-
Q 021783 112 ADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFLQ------NAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQ- 183 (307)
Q Consensus 112 ~d~~~~s~~K~~~g~~g-~~~G~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~- 183 (307)
.|++ +++|.++| | +.+|+++++++ +.+.+.... ........+..+..+.+.++.++. +.+.++..
T Consensus 657 PDii--tlsK~L~g--G~~Plgav~~~~~-i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~--~~l~~~~~~ 729 (831)
T 4a0g_A 657 PDIA--CFAKLLTG--GMVPLAVTLATDA-VFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKD--PETNHNITS 729 (831)
T ss_dssp CSEE--EECGGGGT--TSSCCEEEEECHH-HHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHC--TTTCTTBCT
T ss_pred CcEE--EEeccccc--CccCcEEEEECHH-HHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHh--hHHHHHHHH
Confidence 4655 69999954 4 56899999855 444332211 112223445566665555443311 00000000
Q ss_pred -----------HHHHHHhcCCCccEEecCCCCCCCchHHHhhhccCCCceEEEEeCCH--------HHHHHHHhcCCcce
Q 021783 184 -----------KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--------ALSKHVVETTKYFS 244 (307)
Q Consensus 184 -----------~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~g 244 (307)
.+.+.+++++.+ ...++.|.++.+.+... ..+..+.+.+.++|
T Consensus 730 ~~~~l~~~l~~~l~~~l~~~~~v------------------~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~G 791 (831)
T 4a0g_A 730 QGKTLRELWDEELVQQISSHSAV------------------QRVVVIGTLFALELKADASNSGYASLYAKSLLIMLREDG 791 (831)
T ss_dssp TSSBBCCCSCHHHHHHHHHSTTE------------------EEEEEETTEEEEEEC---------CHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhhCCCc------------------eeEeecccEEEEEEecCccccccchHHHHHHHHHHHHCC
Confidence 011111111111 01244577888877422 23667888888899
Q ss_pred eecCCCCccceeecccccCCCCCcHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 021783 245 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 305 (307)
Q Consensus 245 i~v~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 305 (307)
+.++++. +.+|+++.. ++++++++.|.++++++
T Consensus 792 v~v~p~g----------------------------~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 792 IFTRPLG----------------------------NVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp EECCCBT----------------------------TEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred cEEEecC----------------------------CEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9877532 349998654 77888888888888765
No 237
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=80.54 E-value=3.5 Score=31.51 Aligned_cols=43 Identities=12% Similarity=0.147 Sum_probs=34.0
Q ss_pred HHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 53 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 53 l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
|.+.-.-.+..++++-..|+.|......++.++|++||+.++.
T Consensus 152 LarLAGl~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 152 LSTLAGLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp HHHHTTSCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred HHHHcCCCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 4444344677888776668899999999999999999998874
No 238
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=69.03 E-value=12 Score=28.69 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=32.3
Q ss_pred HHhhcCCCceEEEEeCC-CCCccccccHHHHHHHHHHcCCEEEE
Q 021783 53 VASAIGPWTKLVWVESP-TNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 53 l~~~l~~~~~~v~~~~~-~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
|.+.-.-.+..++++-+ .|..|......++.++|++||+.++.
T Consensus 151 LarlAGl~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 151 LARMAGLQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp HHHHTTSCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHcCCCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 33333345677777652 56789999999999999999998874
No 239
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=66.86 E-value=19 Score=25.37 Aligned_cols=49 Identities=10% Similarity=0.144 Sum_probs=36.9
Q ss_pred EEEEecCCChHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 41 VVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 41 ~~~~v~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
.++.++.+..+.+..++. .++.+++++.. ..+-+++.++|+++|++++.
T Consensus 54 ~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g------~~~~~~i~~~A~~~~ipvl~ 103 (139)
T 2ioj_A 54 AALVTGGDRSDLLLTALEMPNVRCLILTGN------LEPVQLVLTKAEERGVPVIL 103 (139)
T ss_dssp EEEEEETTCHHHHHHHTTCTTEEEEEEETT------CCCCHHHHHHHHHHTCCEEE
T ss_pred EEEEEcCCHHHHHHHHHhCCCCcEEEEcCC------CCCCHHHHHHHHHCCCeEEE
Confidence 566777777777778887 78888888643 33456777999999998885
No 240
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=63.25 E-value=13 Score=28.87 Aligned_cols=42 Identities=12% Similarity=0.022 Sum_probs=31.8
Q ss_pred HHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 53 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 53 l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
|.+...-.+..++++-. |..|......++.++|++||+.++.
T Consensus 171 LarlAGl~Pa~VicEi~-~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 171 LAELANLVPITTICEMM-GDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp HHHHTTSCSEEEEEEEB-CTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred HHHHcCCCceEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 44443445667776644 6679999999999999999998874
No 241
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=63.23 E-value=5.1 Score=35.16 Aligned_cols=86 Identities=10% Similarity=0.018 Sum_probs=55.5
Q ss_pred cCCCCeEEEcCCCCcchHHH---HhhhcccCCcEEEEecCCC--h---HHHHhhc-CCCceEEEEeCCCCCccccccHHH
Q 021783 11 LGTGEEIVAGDDLYGGTDRL---LSRVTPKTGVVVKRVNTCD--L---DEVASAI-GPWTKLVWVESPTNPRQQICDIRK 81 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~---~~~~~~~~g~~~~~v~~~d--~---~~l~~~l-~~~~~~v~~~~~~n~tG~~~~~~~ 81 (307)
..+|..|++.-.+|. .... +...++..|..-++++... . ....... ...+.= + .+.+..|...++++
T Consensus 6 ~~~g~~~i~~~f~W~-w~~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~d-y--~i~~~~Gt~~df~~ 81 (496)
T 4gqr_A 6 TQQGRTSIVHLFEWR-WVDIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVS-Y--KLCTRSGNEDEFRN 81 (496)
T ss_dssp CCTTCCEEEEETTCC-HHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSC-S--CSCBTTBCHHHHHH
T ss_pred CCCCCcEEEEecCCC-HHHHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccC-c--eeCCCCCCHHHHHH
Confidence 357888888888773 3322 2245788999988887531 0 0000000 001110 1 24566799999999
Q ss_pred HHHHHHHcCCEEEEeCccC
Q 021783 82 IAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 82 l~~~~~~~~~~li~D~a~~ 100 (307)
+++-||++|+.||.|-+..
T Consensus 82 lv~~aH~~Gi~VilD~V~N 100 (496)
T 4gqr_A 82 MVTRCNNVGVRIYVDAVIN 100 (496)
T ss_dssp HHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHCCCEEEEEEccC
Confidence 9999999999999999963
No 242
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=61.80 E-value=17 Score=30.72 Aligned_cols=69 Identities=10% Similarity=-0.045 Sum_probs=46.8
Q ss_pred hcCCCCeEEEcCCCCcch------HHHHhhhcccCCcEEEEecCC-------------ChHHHHhhcC-CCceEEEEeCC
Q 021783 10 LLGTGEEIVAGDDLYGGT------DRLLSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 69 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~------~~~~~~~~~~~g~~~~~v~~~-------------d~~~l~~~l~-~~~~~v~~~~~ 69 (307)
.+++||+|-+-+|+.+.. .......++..|.+++.-+.. -.++|.+++. +..++|++..-
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rG 118 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIG 118 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 368899999999987532 112224567799999887652 2467777776 78899988765
Q ss_pred CCCcccccc
Q 021783 70 TNPRQQICD 78 (307)
Q Consensus 70 ~n~tG~~~~ 78 (307)
..-+-.++|
T Consensus 119 Gyga~rlLp 127 (371)
T 3tla_A 119 GDNSNSLLP 127 (371)
T ss_dssp CSCGGGGGG
T ss_pred cccHHHHHh
Confidence 554555554
No 243
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=61.05 E-value=20 Score=27.67 Aligned_cols=36 Identities=19% Similarity=0.124 Sum_probs=29.1
Q ss_pred CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 59 PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
-.+.+++++-. |..|......++.++|++||+.++.
T Consensus 166 l~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 166 FKPAGVLCELT-NDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp SCSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEEE
Confidence 35667776644 6779999999999999999998874
No 244
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=60.12 E-value=12 Score=26.18 Aligned_cols=43 Identities=12% Similarity=0.101 Sum_probs=29.0
Q ss_pred HHHHhhcCCCceEEEEeCCCCCcccccc-------HHHHHHHHHHcCCEEE
Q 021783 51 DEVASAIGPWTKLVWVESPTNPRQQICD-------IRKIAEMAHAHGALLL 94 (307)
Q Consensus 51 ~~l~~~l~~~~~~v~~~~~~n~tG~~~~-------~~~l~~~~~~~~~~li 94 (307)
+-+.+++..+...+++.| |+|+|...| -++|.+.++--|+.++
T Consensus 58 ei~~~Al~~~A~~vIl~H-NHPSG~~~PS~~D~~~T~~l~~a~~ll~I~ll 107 (126)
T 2qlc_A 58 EIFKAAIRESAHSIILVH-NHPSGDVQPSNADKQVTSILKKAGDLLQIELL 107 (126)
T ss_dssp HHHHHHHHTTCSEEEEEE-ECSSSCCSCCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHcCCcEEEEEe-cCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEe
Confidence 456777776666676654 567888865 5567777777776543
No 245
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=59.34 E-value=37 Score=23.39 Aligned_cols=55 Identities=9% Similarity=0.178 Sum_probs=36.4
Q ss_pred ccCCcEEEEecCCChHHHHhhcC----------CCceEEE-EeCCCCCccccccHHHHHHHHHHcCCEEE
Q 021783 36 PKTGVVVKRVNTCDLDEVASAIG----------PWTKLVW-VESPTNPRQQICDIRKIAEMAHAHGALLL 94 (307)
Q Consensus 36 ~~~g~~~~~v~~~d~~~l~~~l~----------~~~~~v~-~~~~~n~tG~~~~~~~l~~~~~~~~~~li 94 (307)
..+++.+..++..|++.+.+.+. .+.-+|+ +.... ...++.+|.++++++|+.+|
T Consensus 13 ~~~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 13 SSFTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCCCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred CeeeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 34567777777778877777665 2222222 33322 23689999999999998886
No 246
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=58.07 E-value=19 Score=27.23 Aligned_cols=49 Identities=8% Similarity=0.074 Sum_probs=37.4
Q ss_pred CChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEE--EEeCccCC
Q 021783 48 CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALL--LVDNSIMS 101 (307)
Q Consensus 48 ~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~l--i~D~a~~~ 101 (307)
.+.++|+++++.....+++- +|.+..++++.+.++++|-.+ +.|-..+.
T Consensus 17 r~~~~l~~al~s~~~~ifll-----~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gl 67 (192)
T 3kts_A 17 HNQKDMEKILELDLTYMVML-----ETHVAQLKALVKYAQAGGKKVLLHADLVNGL 67 (192)
T ss_dssp SSSHHHHHHTTSSCCEEEEC-----SEETTTHHHHHHHHHHTTCEEEEEGGGEETC
T ss_pred cCHHHHHHHHcCCCCEEEEe-----cCcHHHHHHHHHHHHHcCCeEEEecCchhcc
Confidence 48899999998767777763 477889999999999998544 45555443
No 247
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=56.33 E-value=26 Score=28.39 Aligned_cols=69 Identities=13% Similarity=0.187 Sum_probs=40.0
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHH---HhhcC-CCceEEEEeCCCCCccccccHHHH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEV---ASAIG-PWTKLVWVESPTNPRQQICDIRKI 82 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l---~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l 82 (307)
++..+++..+.| .++ ++.+|.+...+... .+.++ .+.++ .+.++|+++.-.++ +-.
T Consensus 178 ~~~~~v~~H~af-~Yf------~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 243 (286)
T 3gi1_A 178 RSKTFVTQHTAF-SYL------AKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIA 243 (286)
T ss_dssp SCCEEEEEESCC-HHH------HHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHH
T ss_pred CCCEEEEECCch-HHH------HHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 577888887776 344 68889887765431 33333 33333 56777776643332 222
Q ss_pred HHHHHHcCCEEEE
Q 021783 83 AEMAHAHGALLLV 95 (307)
Q Consensus 83 ~~~~~~~~~~li~ 95 (307)
..++++.|+.++.
T Consensus 244 ~~la~~~g~~v~~ 256 (286)
T 3gi1_A 244 HAIAKSTGAKVKT 256 (286)
T ss_dssp HHHHHTTTCEEEE
T ss_pred HHHHHHhCCeEEE
Confidence 3456677776653
No 248
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=56.20 E-value=7.8 Score=33.75 Aligned_cols=32 Identities=16% Similarity=0.127 Sum_probs=27.9
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 69 PTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 69 ~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+....|...+++++++-||++|+.||.|.++-
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 88 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAAGVDIYVDTLIN 88 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 44567888899999999999999999999963
No 249
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=56.19 E-value=17 Score=30.17 Aligned_cols=69 Identities=13% Similarity=0.023 Sum_probs=45.8
Q ss_pred hcCCCCeEEEcCCCCcc------hHHHHhhhcccCCcEEEEecCC-------------ChHHHHhhcC-CCceEEEEeCC
Q 021783 10 LLGTGEEIVAGDDLYGG------TDRLLSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 69 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~------~~~~~~~~~~~~g~~~~~v~~~-------------d~~~l~~~l~-~~~~~v~~~~~ 69 (307)
.+++||+|-+-.|+.+. ........++..|.+++.-+.. -.++|.+++. +..++|+...-
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 47899999988887532 1222224567789999887652 2466777664 78899988765
Q ss_pred CCCcccccc
Q 021783 70 TNPRQQICD 78 (307)
Q Consensus 70 ~n~tG~~~~ 78 (307)
..-+-.++|
T Consensus 88 G~g~~rlL~ 96 (327)
T 4h1h_A 88 GFNSNQLLP 96 (327)
T ss_dssp CSCGGGGGG
T ss_pred chhHHHHhh
Confidence 554555554
No 250
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=56.09 E-value=48 Score=27.49 Aligned_cols=84 Identities=14% Similarity=0.130 Sum_probs=46.9
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcE---EEEecCCChHHH-Hhh------cC-CCceEEEEeCCCCCcc------c
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVV---VKRVNTCDLDEV-ASA------IG-PWTKLVWVESPTNPRQ------Q 75 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~---~~~v~~~d~~~l-~~~------l~-~~~~~v~~~~~~n~tG------~ 75 (307)
+|..++.-+.++.... ..++..|+. +.....++.+++ .+. +. .++++|++++.+.... .
T Consensus 57 ~g~~vlyId~E~s~~~----~ra~~lGvd~d~llv~~~~~~E~~~l~i~~~l~~i~~~~~~lvVIDSI~aL~~~~eieg~ 132 (333)
T 3io5_A 57 PDAVCLFYDSEFGITP----AYLRSMGVDPERVIHTPVQSLEQLRIDMVNQLDAIERGEKVVVFIDSLGNLASKKETEDA 132 (333)
T ss_dssp TTCEEEEEESSCCCCH----HHHHHTTCCGGGEEEEECSBHHHHHHHHHHHHHTCCTTCCEEEEEECSTTCBCC------
T ss_pred CCceEEEEeccchhhH----HHHHHhCCCHHHeEEEcCCCHHHHHHHHHHHHHHhhccCceEEEEecccccccchhccCc
Confidence 4777776666664433 234555543 333444566554 222 33 5688999998876531 1
Q ss_pred --------cc-------cHHHHHHHHHHcCCEEE-EeCccC
Q 021783 76 --------IC-------DIRKIAEMAHAHGALLL-VDNSIM 100 (307)
Q Consensus 76 --------~~-------~~~~l~~~~~~~~~~li-~D~a~~ 100 (307)
+. -+.+|..+++++|+.+| +.-++.
T Consensus 133 ~gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i~vi~tNQV~k 173 (333)
T 3io5_A 133 LNEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIAINHTYE 173 (333)
T ss_dssp --------CTHHHHHHHHHHHHHHHHHHTTCEEEEEEEC--
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEEECCeee
Confidence 11 14556778899998765 444433
No 251
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=55.89 E-value=7.6 Score=24.93 Aligned_cols=21 Identities=14% Similarity=0.123 Sum_probs=18.9
Q ss_pred cHHHHHHHHHHcCCEEEEeCc
Q 021783 78 DIRKIAEMAHAHGALLLVDNS 98 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a 98 (307)
--.+|.++|+++|++++.|-.
T Consensus 28 ~A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 28 KALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHHcCCCEEeCHH
Confidence 378999999999999999975
No 252
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=54.42 E-value=43 Score=22.02 Aligned_cols=76 Identities=25% Similarity=0.216 Sum_probs=45.9
Q ss_pred HHHhcCCC-CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHH
Q 021783 7 VTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 7 ~~~~~~~g-d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
+..+.+.| .+|.+.+..- ... ..+...++.....+..+.+++++.+. +..+++.+.+.. ....+.+.
T Consensus 21 ~~~l~~~g~~~v~~~~r~~-~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~~~~~------~~~~~~~~ 88 (118)
T 3ic5_A 21 AALLKTSSNYSVTVADHDL-AAL----AVLNRMGVATKQVDAKDEAGLAKALG-GFDAVISAAPFF------LTPIIAKA 88 (118)
T ss_dssp HHHHHHCSSEEEEEEESCH-HHH----HHHHTTTCEEEECCTTCHHHHHHHTT-TCSEEEECSCGG------GHHHHHHH
T ss_pred HHHHHhCCCceEEEEeCCH-HHH----HHHHhCCCcEEEecCCCHHHHHHHHc-CCCEEEECCCch------hhHHHHHH
Confidence 33455566 5666555432 121 11225677887888888888888876 445566443211 24678888
Q ss_pred HHHcCCEEE
Q 021783 86 AHAHGALLL 94 (307)
Q Consensus 86 ~~~~~~~li 94 (307)
|.+.|+..+
T Consensus 89 ~~~~g~~~~ 97 (118)
T 3ic5_A 89 AKAAGAHYF 97 (118)
T ss_dssp HHHTTCEEE
T ss_pred HHHhCCCEE
Confidence 888887655
No 253
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=54.08 E-value=7.1 Score=27.14 Aligned_cols=40 Identities=13% Similarity=0.097 Sum_probs=26.2
Q ss_pred HHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCc
Q 021783 51 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 98 (307)
Q Consensus 51 ~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a 98 (307)
+-+++.....++.++++. |.. -+++.++|+++|+.++- ++
T Consensus 73 ~~v~e~~~~g~k~v~~~~-----G~~--~~e~~~~a~~~Girvv~-nC 112 (122)
T 3ff4_A 73 SEYNYILSLKPKRVIFNP-----GTE--NEELEEILSENGIEPVI-GC 112 (122)
T ss_dssp GGHHHHHHHCCSEEEECT-----TCC--CHHHHHHHHHTTCEEEE-SC
T ss_pred HHHHHHHhcCCCEEEECC-----CCC--hHHHHHHHHHcCCeEEC-Cc
Confidence 344544444566677643 332 26999999999999884 44
No 254
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=53.74 E-value=34 Score=28.06 Aligned_cols=68 Identities=13% Similarity=0.161 Sum_probs=41.2
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------C---hHHHHhhcC-CCceEEEEeCCCCCccccccHHHH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------D---LDEVASAIG-PWTKLVWVESPTNPRQQICDIRKI 82 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d---~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l 82 (307)
++..+++..+.| .|+ ++.+|.+...+... . +.++.+.++ .+.++|+.+.-.+ -+-+
T Consensus 189 ~~~~~v~~H~af-~Yf------a~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~-------~~~~ 254 (312)
T 2o1e_A 189 EKKEFITQHTAF-GYL------AKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIAS-------SKVA 254 (312)
T ss_dssp SCCEEEESSCTT-HHH------HHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECSSCCC-------HHHH
T ss_pred CCCEEEEECCch-HHH------HHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCC-------hHHH
Confidence 577888887766 343 68889987765421 3 344444454 4677777653333 2344
Q ss_pred HHHHHHcCCEEE
Q 021783 83 AEMAHAHGALLL 94 (307)
Q Consensus 83 ~~~~~~~~~~li 94 (307)
..++++.|+.++
T Consensus 255 ~~ia~e~g~~v~ 266 (312)
T 2o1e_A 255 DTLASEIGAKTE 266 (312)
T ss_dssp HHHHHHTCCEEE
T ss_pred HHHHHHhCCcEE
Confidence 555777787664
No 255
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=51.61 E-value=26 Score=30.37 Aligned_cols=84 Identities=15% Similarity=0.115 Sum_probs=61.0
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcCCC-ceEEEEeCCCCCccccccHHHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMA 86 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~~~-~~~v~~~~~~n~tG~~~~~~~l~~~~ 86 (307)
++.+=+-+.+.+|-.+..+..|..+.+...+++..=+. .++.++.+.+..+ ...+.+. + |-.|.+.+..+++++|
T Consensus 285 ~l~~y~i~~iEdPl~~dD~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ik-v-~qiGGitea~~ia~lA 362 (436)
T 2al1_A 285 LMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALLLK-V-NQIGTLSESIKAAQDS 362 (436)
T ss_dssp HHHHSCEEEEECCSCTTCHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-H-HHHCCHHHHHHHHHHH
T ss_pred HHHhCCcEEEECCCCCcCHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEEec-h-hhcCCHHHHHHHHHHH
Confidence 45555678899998877777787777777777764443 2688888888744 3344432 3 3468888899999999
Q ss_pred HHcCCEEEE
Q 021783 87 HAHGALLLV 95 (307)
Q Consensus 87 ~~~~~~li~ 95 (307)
+++|+.+++
T Consensus 363 ~~~g~~~~~ 371 (436)
T 2al1_A 363 FAAGWGVMV 371 (436)
T ss_dssp HHTTCEEEE
T ss_pred HHcCCeEEE
Confidence 999997765
No 256
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=51.58 E-value=26 Score=29.22 Aligned_cols=69 Identities=12% Similarity=-0.032 Sum_probs=46.1
Q ss_pred hcCCCCeEEEcCCCCcch------HHHHhhhcccCCcEEEEecCC-------------ChHHHHhhcC-CCceEEEEeCC
Q 021783 10 LLGTGEEIVAGDDLYGGT------DRLLSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 69 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~------~~~~~~~~~~~g~~~~~v~~~-------------d~~~l~~~l~-~~~~~v~~~~~ 69 (307)
.+++||+|-+-.|+.+.. .......++..|.+++.-+.. -.++|.+++. +..++|++..-
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 478999999999887532 112224567789999886642 2466766664 78899988765
Q ss_pred CCCcccccc
Q 021783 70 TNPRQQICD 78 (307)
Q Consensus 70 ~n~tG~~~~ 78 (307)
..-+-.++|
T Consensus 89 G~g~~rlL~ 97 (336)
T 3sr3_A 89 GMNSNSLLP 97 (336)
T ss_dssp CSCGGGGGG
T ss_pred cccHHHHhh
Confidence 554555554
No 257
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=51.44 E-value=58 Score=26.31 Aligned_cols=68 Identities=10% Similarity=0.048 Sum_probs=38.3
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC----ChHHHHhh---cC-CCceEEEEeCCCCCccccccHHHHHH
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASA---IG-PWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~---l~-~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
++..+++..+.| .++ ++.+|.+...+... .+.++.+. ++ .+.++|+++.-.++. -...
T Consensus 189 ~~~~~v~~H~af-~Yf------~~~yGl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~-------~~~~ 254 (291)
T 1pq4_A 189 PQRKFIVFHPSW-AYF------ARDYNLVQIPIEVEGQEPSAQELKQLIDTAKENNLTMVFGETQFSTK-------SSEA 254 (291)
T ss_dssp SCCEEEESSCCC-HHH------HHHTTCEEEESCBTTBCCCHHHHHHHHHHHHTTTCCEEEEETTSCCH-------HHHH
T ss_pred CCCEEEEECCch-HHH------HHHCCCEEeecccCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChH-------HHHH
Confidence 577888888877 444 67889887665421 33333333 33 466667665433321 1123
Q ss_pred HHHHcCCEEE
Q 021783 85 MAHAHGALLL 94 (307)
Q Consensus 85 ~~~~~~~~li 94 (307)
++++.|+.++
T Consensus 255 ia~~~g~~v~ 264 (291)
T 1pq4_A 255 IAAEIGAGVE 264 (291)
T ss_dssp HHHHHTCEEE
T ss_pred HHHHcCCeEE
Confidence 4666666554
No 258
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=51.42 E-value=23 Score=29.42 Aligned_cols=69 Identities=13% Similarity=0.083 Sum_probs=46.3
Q ss_pred hcCCCCeEEEcCCCCcch---HHH---HhhhcccCCcEEEEecCC-------------ChHHHHhhcC-CCceEEEEeCC
Q 021783 10 LLGTGEEIVAGDDLYGGT---DRL---LSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 69 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~---~~~---~~~~~~~~g~~~~~v~~~-------------d~~~l~~~l~-~~~~~v~~~~~ 69 (307)
.+++||+|-+-.|+.+.. ... ....++..|.+++.-+.. -.++|.+++. +..++|+...-
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 478999999888877543 222 224567799999987752 2466766664 78899988765
Q ss_pred CCCcccccc
Q 021783 70 TNPRQQICD 78 (307)
Q Consensus 70 ~n~tG~~~~ 78 (307)
..-+-.++|
T Consensus 88 G~g~~rlL~ 96 (331)
T 4e5s_A 88 GYNSNGLLK 96 (331)
T ss_dssp CSCGGGGGG
T ss_pred cccHHHHHh
Confidence 554455544
No 259
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=51.03 E-value=12 Score=32.81 Aligned_cols=32 Identities=6% Similarity=0.032 Sum_probs=27.5
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 69 PTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 69 ~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+....|...+++++++.||++|+.||.|-+..
T Consensus 71 id~~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 102 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSRNVQVYGDVVLN 102 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 44456888899999999999999999999953
No 260
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=50.18 E-value=13 Score=32.69 Aligned_cols=32 Identities=3% Similarity=-0.051 Sum_probs=27.3
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 69 PTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 69 ~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+....|...+++++++-||++|+.||.|-+..
T Consensus 73 idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 104 (480)
T 1ud2_A 73 VRTKYGTKAQLERAIGSLKSNDINVYGDVVMN 104 (480)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 34456888889999999999999999999963
No 261
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=49.97 E-value=13 Score=32.71 Aligned_cols=32 Identities=6% Similarity=0.005 Sum_probs=27.4
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 69 PTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 69 ~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+....|...+++++++.||++|+.||.|-+..
T Consensus 75 idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 106 (485)
T 1wpc_A 75 VRTKYGTRSQLQAAVTSLKNNGIQVYGDVVMN 106 (485)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 34456888899999999999999999999953
No 262
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=49.84 E-value=13 Score=33.05 Aligned_cols=32 Identities=16% Similarity=0.087 Sum_probs=27.4
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 69 PTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 69 ~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+....|...+++++++.||++|+.||.|-+..
T Consensus 74 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 105 (515)
T 1hvx_A 74 VRTKYGTKAQYLQAIQAAHAAGMQVYADVVFD 105 (515)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 34456888899999999999999999999953
No 263
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=49.75 E-value=30 Score=28.76 Aligned_cols=73 Identities=10% Similarity=0.190 Sum_probs=45.9
Q ss_pred CCCcchHHHHhhhcccCCcEEEEecCCCh-HHHHhhcC-CCceEEEEeCCCCCcccc-ccHHHHHHHHHHcCCEEEEeCc
Q 021783 22 DLYGGTDRLLSRVTPKTGVVVKRVNTCDL-DEVASAIG-PWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNS 98 (307)
Q Consensus 22 ~~~~~~~~~~~~~~~~~g~~~~~v~~~d~-~~l~~~l~-~~~~~v~~~~~~n~tG~~-~~~~~l~~~~~~~~~~li~D~a 98 (307)
|.|.+....... ....++-++.+|.... +.+.+++. ...+.+++-+. |.. .+.+++.++|+++|+.++==++
T Consensus 65 pvy~sv~ea~~~-~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~----G~~e~~~~~l~~~a~~~g~rliGPNc 139 (334)
T 3mwd_B 65 PVFKNMADAMRK-HPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAE----GIPEALTRKLIKKADQKGVTIIGPAT 139 (334)
T ss_dssp EEESSHHHHHHH-CTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCS----CCCHHHHHHHHHHHHHHTCEEECSSC
T ss_pred eeeCCHHHHhhc-CCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECC----CCCHHHHHHHHHHHHHcCCEEEccCC
Confidence 566565522111 0124566667776653 67777777 67777776332 333 4688999999999998885444
Q ss_pred c
Q 021783 99 I 99 (307)
Q Consensus 99 ~ 99 (307)
.
T Consensus 140 ~ 140 (334)
T 3mwd_B 140 V 140 (334)
T ss_dssp C
T ss_pred c
Confidence 4
No 264
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=49.57 E-value=41 Score=24.17 Aligned_cols=53 Identities=13% Similarity=0.135 Sum_probs=36.4
Q ss_pred ChHHHHhhcC-CCceEEEEeCCCCCcccccc----HHHHH-HHHHHcCCEE-EEeCccCC
Q 021783 49 DLDEVASAIG-PWTKLVWVESPTNPRQQICD----IRKIA-EMAHAHGALL-LVDNSIMS 101 (307)
Q Consensus 49 d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~----~~~l~-~~~~~~~~~l-i~D~a~~~ 101 (307)
+.+.|.+.+. .++..+++..|-|..|..-. .++++ .++++.++.+ .+||.+++
T Consensus 43 ~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 43 GLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp CHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred HHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 5788888887 47888999988887777654 23444 3444457654 47998763
No 265
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=48.89 E-value=14 Score=32.00 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=27.2
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 69 PTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 69 ~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+....|...+++++++-||++|+.||.|.+..
T Consensus 79 id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 110 (435)
T 1mxg_A 79 VETRFGSKEELVRLIQTAHAYGIKVIADVVIN 110 (435)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 34456888889999999999999999999953
No 266
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=48.53 E-value=17 Score=26.72 Aligned_cols=60 Identities=13% Similarity=0.118 Sum_probs=39.1
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcC---C--CceEEEEeCCCCCcc
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIG---P--WTKLVWVESPTNPRQ 74 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~---~--~~~~v~~~~~~n~tG 74 (307)
.-||++ ...+.++...+...++..|+++..... ||.+++.+++. . +..+|+++.-..++-
T Consensus 20 ~tGdEl---g~i~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~ 86 (169)
T 1y5e_A 20 TISDTR---TEETDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGITK 86 (169)
T ss_dssp EECSSC---CTTTCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSST
T ss_pred EEcCcc---CeeccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCC
Confidence 346665 234445555566778888988765543 68887777765 3 677888876666543
No 267
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=48.52 E-value=11 Score=24.67 Aligned_cols=21 Identities=14% Similarity=0.052 Sum_probs=18.8
Q ss_pred cHHHHHHHHHHcCCEEEEeCc
Q 021783 78 DIRKIAEMAHAHGALLLVDNS 98 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a 98 (307)
--.+|.++|+++|++++.|-.
T Consensus 28 ~A~~I~e~A~e~gVPi~e~~~ 48 (93)
T 2vt1_B 28 CALAVRKYANEVGIPTVRDVK 48 (93)
T ss_dssp HHHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHHcCCCEEECHH
Confidence 378999999999999999975
No 268
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=48.38 E-value=42 Score=24.73 Aligned_cols=77 Identities=10% Similarity=0.084 Sum_probs=45.7
Q ss_pred CCeEEEcCCCCcchH-HHHhhhcccCCcEEEEecCCC--hHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcC
Q 021783 14 GEEIVAGDDLYGGTD-RLLSRVTPKTGVVVKRVNTCD--LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG 90 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~-~~~~~~~~~~g~~~~~v~~~d--~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~ 90 (307)
.++|.+...+..... ..+...+...|.++..++.+. .......++++.-+|+++ .+|...+.-+.++.+++.|
T Consensus 39 a~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS----~sG~t~~~~~~~~~ak~~g 114 (187)
T 3sho_A 39 ADHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVS----VWRYLRDTVAALAGAAERG 114 (187)
T ss_dssp CSEEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEEC----CSSCCHHHHHHHHHHHHTT
T ss_pred CCEEEEEecCchHHHHHHHHHHHHhcCCCEEEecCCchhHHHHHhcCCCCCEEEEEe----CCCCCHHHHHHHHHHHHCC
Confidence 457777666543222 223344556788887766322 222233445665555543 2577788889999999998
Q ss_pred CEEE
Q 021783 91 ALLL 94 (307)
Q Consensus 91 ~~li 94 (307)
+.+|
T Consensus 115 ~~vi 118 (187)
T 3sho_A 115 VPTM 118 (187)
T ss_dssp CCEE
T ss_pred CCEE
Confidence 6554
No 269
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=48.15 E-value=31 Score=26.85 Aligned_cols=42 Identities=12% Similarity=0.041 Sum_probs=31.2
Q ss_pred HHhhcCCCceEEEEeCCCCC-----------ccccccHHHHHHHHHHcCCEEEE
Q 021783 53 VASAIGPWTKLVWVESPTNP-----------RQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 53 l~~~l~~~~~~v~~~~~~n~-----------tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
|.+.-.-.+..++++-. |. .|.+....++.++|++||+.++.
T Consensus 160 LarLAGl~PagVicEi~-~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 160 LCRLAGKRPVAVISEIV-DDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCT 212 (233)
T ss_dssp HHHHTTCCSBEEEEEBE-ECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEE
T ss_pred HHHHcCCCceEEEEEeC-CCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 44443445677776633 44 69999999999999999998874
No 270
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=48.14 E-value=15 Score=32.83 Aligned_cols=86 Identities=14% Similarity=0.016 Sum_probs=50.8
Q ss_pred CCCCeEEEcCCCCcch------H-HHH---hhhcccCCcEEEEecCC-Ch-H----HHHhhcCCCceEEEEeCCC--CCc
Q 021783 12 GTGEEIVAGDDLYGGT------D-RLL---SRVTPKTGVVVKRVNTC-DL-D----EVASAIGPWTKLVWVESPT--NPR 73 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~------~-~~~---~~~~~~~g~~~~~v~~~-d~-~----~l~~~l~~~~~~v~~~~~~--n~t 73 (307)
..++.|++.-..+.+. . ..+ -..++..|++.+++... +. + .-...-..... ...++ ...
T Consensus 13 ~~~~~vi~q~F~w~~~~~~gGd~~~gi~~~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~---~~~id~~p~~ 89 (527)
T 1gcy_A 13 HGGDEIILQGFHWNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYF---WHDFNKNGRY 89 (527)
T ss_dssp GGGCCCEEECCCTTHHHHSTTTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTT---CSSSCSCSSS
T ss_pred cCCCcEEEEEEEcCCCcccCCcHHHHHHHHHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcc---cccCCCCCCC
Confidence 3467788777766411 1 111 13456788887777542 10 0 00000001111 22334 566
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
|...+++++++-||++|+.||.|-++.
T Consensus 90 Gt~~dfk~Lv~~aH~~GI~VilD~V~N 116 (527)
T 1gcy_A 90 GSDAQLRQAASALGGAGVKVLYDVVPN 116 (527)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 888899999999999999999999964
No 271
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=48.08 E-value=11 Score=25.05 Aligned_cols=25 Identities=12% Similarity=0.100 Sum_probs=20.8
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCc
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNS 98 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a 98 (307)
|.-.--.+|.++|+++|++++.|-.
T Consensus 39 G~~~~A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 39 GVNLRAKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp EEHHHHHHHHHHHHHHTCCEEECHH
T ss_pred eCcHHHHHHHHHHHHcCCeEEECHH
Confidence 4444578999999999999999975
No 272
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=46.75 E-value=52 Score=23.87 Aligned_cols=74 Identities=12% Similarity=0.095 Sum_probs=49.2
Q ss_pred CeEEEc---CCCCcchHHHHhhhcccCCcEEEEecCC-ChHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHc
Q 021783 15 EEIVAG---DDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAH 89 (307)
Q Consensus 15 d~Vlv~---~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~ 89 (307)
.+|++- ...|.--...+...++..|.+++....+ .++++.+++. .++.+|.++.... .....++++.+.+++.
T Consensus 19 ~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~~~~--~~~~~~~~~i~~L~~~ 96 (161)
T 2yxb_A 19 YKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSILNG--AHLHLMKRLMAKLREL 96 (161)
T ss_dssp CEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEESSS--CHHHHHHHHHHHHHHT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEeech--hhHHHHHHHHHHHHhc
Confidence 455533 3345444455667788899999988764 6777777665 6777887765433 3455688888888875
Q ss_pred C
Q 021783 90 G 90 (307)
Q Consensus 90 ~ 90 (307)
+
T Consensus 97 g 97 (161)
T 2yxb_A 97 G 97 (161)
T ss_dssp T
T ss_pred C
Confidence 4
No 273
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=46.51 E-value=13 Score=32.19 Aligned_cols=29 Identities=17% Similarity=0.258 Sum_probs=25.8
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCcc
Q 021783 71 NPRQQICDIRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 71 n~tG~~~~~~~l~~~~~~~~~~li~D~a~ 99 (307)
...|...+++++++.||++|+.||.|-+.
T Consensus 64 p~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 64 AEYGSEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34577888999999999999999999995
No 274
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=46.18 E-value=12 Score=24.88 Aligned_cols=21 Identities=19% Similarity=0.214 Sum_probs=18.7
Q ss_pred cHHHHHHHHHHcCCEEEEeCc
Q 021783 78 DIRKIAEMAHAHGALLLVDNS 98 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a 98 (307)
--.+|.++|+++|++++.|-.
T Consensus 28 ~A~~I~e~A~e~gVPi~e~~~ 48 (98)
T 3c01_E 28 RALAVRAYAEKVGVPVIVDIK 48 (98)
T ss_dssp HHHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHHcCCCeecCHH
Confidence 378999999999999999875
No 275
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=46.13 E-value=40 Score=29.21 Aligned_cols=85 Identities=13% Similarity=0.042 Sum_probs=60.2
Q ss_pred HhcCCCCeEEEcCCCCcchHHHHhhhcccCC-cEEEEecC--CChHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHH
Q 021783 9 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG-VVVKRVNT--CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 9 ~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g-~~~~~v~~--~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
.++.+=+-+.+.+|-...-+..|..+.+..| +.++-=+. .+++.+.+.+.. ....+.+. + |-.|.+-+..++++
T Consensus 290 ~lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIK-v-nqiGGITEalkaa~ 367 (441)
T 3qtp_A 290 DYGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLIK-V-NQIGTLTETFKTIK 367 (441)
T ss_dssp HHHHHSCEEEEESCSCTTCHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC-G-GGTCCHHHHHHHHH
T ss_pred HHhhhcceeeecCCCChHHHHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEec-c-cccccHHHHHHHHH
Confidence 3455445677888887777777878888787 66554333 368888888863 33444443 3 34688889999999
Q ss_pred HHHHcCCEEEE
Q 021783 85 MAHAHGALLLV 95 (307)
Q Consensus 85 ~~~~~~~~li~ 95 (307)
+|+++|..+++
T Consensus 368 lA~~~G~~vmv 378 (441)
T 3qtp_A 368 MAQEKGWGVMA 378 (441)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHcCCeEEE
Confidence 99999988776
No 276
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=45.54 E-value=13 Score=33.02 Aligned_cols=29 Identities=14% Similarity=0.248 Sum_probs=25.5
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
..|...+++++++-||++|+.||.|-++.
T Consensus 75 ~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 103 (549)
T 4aie_A 75 QYGTMADMDELISKAKEHHIKIVMDLVVN 103 (549)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 34777789999999999999999999963
No 277
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=45.53 E-value=66 Score=24.36 Aligned_cols=75 Identities=12% Similarity=0.138 Sum_probs=51.4
Q ss_pred CCcchHHHHhhhcccCCcEEEEecCC-ChHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcC----CEEEEe
Q 021783 23 LYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHG----ALLLVD 96 (307)
Q Consensus 23 ~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~----~~li~D 96 (307)
.|.--...+...++..|.+++.+..+ .++++.+.+. .++.+|.++... +.....++++.+.+++.+ +.+++=
T Consensus 100 ~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~--~~~~~~~~~~i~~l~~~~~~~~~~v~vG 177 (210)
T 1y80_A 100 LHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALL--TTTMMNMKSTIDALIAAGLRDRVKVIVG 177 (210)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCS--GGGTHHHHHHHHHHHHTTCGGGCEEEEE
T ss_pred ccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHhcCCCCCCeEEEE
Confidence 44444455667788999999987765 5677777664 567777776543 234556888888888764 777775
Q ss_pred Ccc
Q 021783 97 NSI 99 (307)
Q Consensus 97 ~a~ 99 (307)
+..
T Consensus 178 G~~ 180 (210)
T 1y80_A 178 GAP 180 (210)
T ss_dssp STT
T ss_pred CCC
Confidence 543
No 278
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=44.59 E-value=15 Score=31.48 Aligned_cols=30 Identities=13% Similarity=0.247 Sum_probs=26.2
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 71 NPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 71 n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
...|...+++++++-||++|+.||.|-+..
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 92 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIVIN 92 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 445777889999999999999999999964
No 279
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=44.40 E-value=35 Score=29.65 Aligned_cols=84 Identities=11% Similarity=0.124 Sum_probs=60.5
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcCCC-ceEEEEeCCCCCccccccHHHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMA 86 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~~~-~~~v~~~~~~n~tG~~~~~~~l~~~~ 86 (307)
++.+=+-+.+.+|-....+..|..+.+...+++..=+. .+++++.+.+..+ ...+.+. + |-.|.+.+..+++++|
T Consensus 282 ll~~y~i~~IEdPl~~dD~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iK-v-~qiGGitea~~ia~lA 359 (439)
T 2akz_A 282 FVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLK-V-NQIGSVTEAIQACKLA 359 (439)
T ss_dssp HHHHSCEEEEECCSCTTCHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-H-HHHCCHHHHHHHHHHH
T ss_pred HHHhCCCcEEECCCCcccHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEEec-h-hhcCCHHHHHHHHHHH
Confidence 44445678899998877777777777777777765443 3788898888744 3444432 2 3468888899999999
Q ss_pred HHcCCEEEE
Q 021783 87 HAHGALLLV 95 (307)
Q Consensus 87 ~~~~~~li~ 95 (307)
+++|+.+++
T Consensus 360 ~~~g~~~~~ 368 (439)
T 2akz_A 360 QENGWGVMV 368 (439)
T ss_dssp HHTTCEEEE
T ss_pred HHCCCeEEe
Confidence 999987765
No 280
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=43.95 E-value=39 Score=26.45 Aligned_cols=89 Identities=11% Similarity=0.043 Sum_probs=47.7
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHH
Q 021783 4 LAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 83 (307)
Q Consensus 4 l~~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~ 83 (307)
+..+......|.+|++-.|.-..-+. .....+.|.++.-++..+.+++.+.+ .+..+|+++=.+.-++ +.++.
T Consensus 37 L~~~~r~~~~g~kvli~kp~~D~Ryg--~~i~sr~G~~~~a~~i~~~~di~~~~-~~~dvViIDEaQF~~~----v~el~ 109 (234)
T 2orv_A 37 MRRVRRFQIAQYKCLVIKYAKDTRYS--SSFCTHDRNTMEALPACLLRDVAQEA-LGVAVIGIDEGQFFPD----IVEFC 109 (234)
T ss_dssp HHHHHHHHTTTCCEEEEEETTCCCC-------------CEEEEESSGGGGHHHH-TTCSEEEESSGGGCTT----HHHHH
T ss_pred HHHHHHHHHCCCeEEEEeecCCccch--HHHHhhcCCeeEEEecCCHHHHHHHh-ccCCEEEEEchhhhhh----HHHHH
Confidence 34444556678888776554322111 13445556665555444444444444 3567888885555443 77888
Q ss_pred HHHHHcCCEEEEeCcc
Q 021783 84 EMAHAHGALLLVDNSI 99 (307)
Q Consensus 84 ~~~~~~~~~li~D~a~ 99 (307)
++..+.|+.||+=+=.
T Consensus 110 ~~l~~~gi~VI~~GL~ 125 (234)
T 2orv_A 110 EAMANAGKTVIVAALD 125 (234)
T ss_dssp HHHHHTTCEEEEECCS
T ss_pred HHHHhCCCEEEEEecc
Confidence 8888889999985544
No 281
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=43.61 E-value=14 Score=31.86 Aligned_cols=31 Identities=10% Similarity=0.023 Sum_probs=26.7
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 70 TNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 70 ~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
....|...+++++++-||++|+.||.|-++.
T Consensus 75 dp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~N 105 (424)
T 2dh2_A 75 DPNFGSKEDFDSLLQSAKKKSIRVILDLTPN 105 (424)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3345777889999999999999999999964
No 282
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=43.56 E-value=14 Score=34.44 Aligned_cols=25 Identities=16% Similarity=0.288 Sum_probs=22.6
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccC
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
..+++++++.||++|+.||.|-++.
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~N 278 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYN 278 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccC
Confidence 4679999999999999999999974
No 283
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=43.50 E-value=52 Score=30.14 Aligned_cols=75 Identities=13% Similarity=0.153 Sum_probs=53.0
Q ss_pred cCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-ChHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHH
Q 021783 11 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMA 86 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~~~ 86 (307)
+++||.|.+--+.-+.....+- ++-..|+..+.++.. ..+.+...++ .++++++++......|...+++++.+-+
T Consensus 136 v~~Gd~V~i~~~~~~e~v~a~l-A~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~ 212 (663)
T 1ry2_A 136 VRKGDTVAVYMPMVPEAIITLL-AISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDA 212 (663)
T ss_dssp CCTTCEEEECCCSSHHHHHHHH-HHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHHH-HHHHcCCEEEeeCCCCCHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHH
Confidence 6899999998887766655543 355689988887764 5677777776 4678888776555567777766655443
No 284
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=43.47 E-value=16 Score=32.07 Aligned_cols=28 Identities=29% Similarity=0.452 Sum_probs=25.2
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCcc
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~ 99 (307)
..|...+++++++-||++|+.||.|-+.
T Consensus 77 ~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 77 DYGTLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3577788999999999999999999996
No 285
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=43.43 E-value=16 Score=32.08 Aligned_cols=31 Identities=19% Similarity=0.291 Sum_probs=26.7
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 70 TNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 70 ~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+...|...+++++++-||++|+.||.|-+..
T Consensus 91 dp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (478)
T 2guy_A 91 NENYGTADDLKALSSALHERGMYLMVDVVAN 121 (478)
T ss_dssp CTTSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 3446778889999999999999999999964
No 286
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=42.99 E-value=12 Score=32.75 Aligned_cols=85 Identities=8% Similarity=0.030 Sum_probs=52.4
Q ss_pred CCCCeEEEcCCCCcchHHHHh---hhcccCCcEEEEecCC-ChHHH-Hhhc--CCCceEEEEeCCCCCccccccHHHHHH
Q 021783 12 GTGEEIVAGDDLYGGTDRLLS---RVTPKTGVVVKRVNTC-DLDEV-ASAI--GPWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~---~~~~~~g~~~~~v~~~-d~~~l-~~~l--~~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
..++.|++.-..+. ...... ..++..|++.+++... .-... .... ...+.- + .++...|...+++++++
T Consensus 7 ~~~~~~i~~~F~w~-~~gi~~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~d-y--~idp~~Gt~~d~~~lv~ 82 (471)
T 1jae_A 7 ASGRNSIVHLFEWK-WNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVS-Y--IINTRSGDESAFTDMTR 82 (471)
T ss_dssp CTTCEEEEEETTCC-HHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCC-S--CSEETTEEHHHHHHHHH
T ss_pred CCCCCeEEEEecCC-HHHHHHHHHHHHHHcCCCEEEeCccccccCCCCCCccccccccc-c--cccCCCCCHHHHHHHHH
Confidence 35677887777663 333322 3467889998887652 10000 0000 001111 1 34445688889999999
Q ss_pred HHHHcCCEEEEeCccC
Q 021783 85 MAHAHGALLLVDNSIM 100 (307)
Q Consensus 85 ~~~~~~~~li~D~a~~ 100 (307)
-||++|+.||.|-+.-
T Consensus 83 ~~h~~Gi~VilD~V~N 98 (471)
T 1jae_A 83 RCNDAGVRIYVDAVIN 98 (471)
T ss_dssp HHHHTTCEEEEEECCS
T ss_pred HHHHCCCEEEEEEecc
Confidence 9999999999999963
No 287
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=42.68 E-value=11 Score=35.22 Aligned_cols=26 Identities=15% Similarity=0.400 Sum_probs=23.4
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
...+++++++-||++|+.||.|-++.
T Consensus 314 ~~~dfk~LV~~aH~~GI~VIlDvV~N 339 (718)
T 2e8y_A 314 RKTELKQMINTLHQHGLRVILDVVFN 339 (718)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 45789999999999999999999974
No 288
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=42.14 E-value=44 Score=28.16 Aligned_cols=12 Identities=25% Similarity=0.160 Sum_probs=5.8
Q ss_pred CceEEEEeCCCC
Q 021783 60 WTKLVWVESPTN 71 (307)
Q Consensus 60 ~~~~v~~~~~~n 71 (307)
+..+|++++...
T Consensus 152 ~~~lVVIDsl~~ 163 (366)
T 1xp8_A 152 AIDVVVVDSVAA 163 (366)
T ss_dssp CCSEEEEECTTT
T ss_pred CCCEEEEeChHH
Confidence 345555554443
No 289
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=42.06 E-value=17 Score=31.46 Aligned_cols=28 Identities=18% Similarity=0.350 Sum_probs=23.9
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCcc
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~ 99 (307)
..|...+++++++-||++|+.||.|.+.
T Consensus 79 ~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 79 EYGTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3455567999999999999999999985
No 290
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=41.79 E-value=83 Score=28.18 Aligned_cols=76 Identities=13% Similarity=0.090 Sum_probs=49.4
Q ss_pred cCCCCeEEEcCCCCcchHHH---HhhhcccCCcEEEE-----ecC---CChHHHHhhcC-CCceEEEEeCCCCCcccccc
Q 021783 11 LGTGEEIVAGDDLYGGTDRL---LSRVTPKTGVVVKR-----VNT---CDLDEVASAIG-PWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 11 ~~~gd~Vlv~~~~~~~~~~~---~~~~~~~~g~~~~~-----v~~---~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~ 78 (307)
++|||.|+++...-+++... +.+.....|++++. +.. -+-++|...++ -+++-++..| |..-.
T Consensus 321 ~~~~d~vi~s~~~ipGne~~~~~~~~~l~~~g~~v~~~~~~~~h~SgHa~~~eL~~~~~~~~Pk~~ipvH-----Ge~~~ 395 (555)
T 3zq4_A 321 INPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGPLNDIHTSGHGGQEEQKLMLRLIKPKFFMPIH-----GEYRM 395 (555)
T ss_dssp CCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECSSSSCCCCCSSCCHHHHHHHHHHSCEEEEEEES-----BCHHH
T ss_pred cCCCCEEEEECCCCCCcHHHHHHHHHHHHHCCCEEEecCCcceEEeCCCCHHHHHHHHHHhCCCEEEEcC-----CCHHH
Confidence 46899999999877766522 12234668898875 111 26667766665 3567666544 55556
Q ss_pred HHHHHHHHHHcCC
Q 021783 79 IRKIAEMAHAHGA 91 (307)
Q Consensus 79 ~~~l~~~~~~~~~ 91 (307)
+.+.++++++.|+
T Consensus 396 ~~~~~~~a~~~G~ 408 (555)
T 3zq4_A 396 QKMHVKLATDCGI 408 (555)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCC
Confidence 7777888888764
No 291
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=41.58 E-value=14 Score=29.64 Aligned_cols=56 Identities=16% Similarity=0.011 Sum_probs=37.9
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcC--CCceEEEEeCCC
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIG--PWTKLVWVESPT 70 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~--~~~~~v~~~~~~ 70 (307)
-|.+|+++.|.-.+ ..+...++..|++++.+|.. +.+.+.+.+. .+...|++++++
T Consensus 13 ~g~~IlvTRp~~~a--~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~n 76 (269)
T 3re1_A 13 SAWRLLLTRPAEES--AALARVLADAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYSAVIVVSKP 76 (269)
T ss_dssp CCCEEEECSCHHHH--HHHHHHHHTTTCEEEECCCCEEEECCCHHHHHHHHHTGGGSSEEEECSHH
T ss_pred CCCEEEEeCChHHH--HHHHHHHHHCCCCEEEcCCEEEecCCCcHHHHHHHHhccCCCEEEEECHH
Confidence 47899999986543 33557788999999999973 4445555543 345677766543
No 292
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=41.40 E-value=45 Score=21.96 Aligned_cols=52 Identities=13% Similarity=0.123 Sum_probs=33.7
Q ss_pred ChHHHHhhcC-CCceEEEEeCCCCCcccccc----HHHHHHHHHHcCCEEE-EeCccC
Q 021783 49 DLDEVASAIG-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLL-VDNSIM 100 (307)
Q Consensus 49 d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~~~~~li-~D~a~~ 100 (307)
+.+.+.+.+. .++..+++-.|-|+.|..-+ .++.++..++.++.++ +||-++
T Consensus 39 ~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 39 DVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 4566666665 46778888889888887764 4444444433366655 787654
No 293
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=41.15 E-value=26 Score=28.26 Aligned_cols=70 Identities=19% Similarity=0.228 Sum_probs=40.2
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEecC------CChHHHHhhc---C-CCceEEEEeCCCCCccccccHHHHHH
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------CDLDEVASAI---G-PWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~------~d~~~l~~~l---~-~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
..+++..+.| .++ ++.+|.+...+.. ..+.++.+.+ + .+.++|+++...++ -..+.|.+
T Consensus 164 ~~~vt~H~af-~Y~------~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~----~~~~~l~~ 232 (282)
T 3mfq_A 164 RYLVTPHDAF-NYF------AASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAIFTESTTNP----ERMKKLQE 232 (282)
T ss_dssp CEEECSSSCC-HHH------HHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEEECBTTSCT----HHHHHHHH
T ss_pred cEEEEECchH-HHH------HHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh----HHHHHHHH
Confidence 3444455555 343 6888998775532 1344444443 3 56777876543332 13566777
Q ss_pred HHHHcCCEEEE
Q 021783 85 MAHAHGALLLV 95 (307)
Q Consensus 85 ~~~~~~~~li~ 95 (307)
+|++.|+.+++
T Consensus 233 ~a~~~g~~v~~ 243 (282)
T 3mfq_A 233 AVKAKGGQVEV 243 (282)
T ss_dssp HHHTTSCCCEE
T ss_pred HHHhcCCceEE
Confidence 88888865543
No 294
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=40.86 E-value=15 Score=32.21 Aligned_cols=31 Identities=26% Similarity=0.342 Sum_probs=26.1
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 70 TNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 70 ~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
....|...+++++++-||++|+.||.|-++.
T Consensus 90 dp~~Gt~~df~~lv~~~h~~Gi~VilD~V~N 120 (475)
T 2z1k_A 90 DPILGGNEALRHLLEVAHAHGVRVILDGVFN 120 (475)
T ss_dssp CGGGTCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 3345777789999999999999999999864
No 295
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=40.36 E-value=16 Score=32.01 Aligned_cols=32 Identities=19% Similarity=0.252 Sum_probs=27.0
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 69 PTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 69 ~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
++...|...+++++++.||++|+.||.|-+..
T Consensus 90 id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (484)
T 2aaa_A 90 VNSNFGTADNLKSLSDALHARGMYLMVDVVPD 121 (484)
T ss_dssp ECTTTCCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 34445777889999999999999999999964
No 296
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=39.58 E-value=17 Score=32.02 Aligned_cols=29 Identities=10% Similarity=0.122 Sum_probs=25.0
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
..|...+++++++-||++|+.||.|-+..
T Consensus 98 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 126 (488)
T 2wc7_A 98 MLGGNEAFKELLDAAHQRNIKVVLDGVFN 126 (488)
T ss_dssp GGTHHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 34666679999999999999999999863
No 297
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=39.53 E-value=61 Score=20.40 Aligned_cols=44 Identities=16% Similarity=0.167 Sum_probs=31.4
Q ss_pred hHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeC
Q 021783 50 LDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDN 97 (307)
Q Consensus 50 ~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~ 97 (307)
.++..+++. .+.+++++.+-..| .-...+.++|++++++++.-.
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~----~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 16 TKQTVKALKRGSVKEVVVAKDADP----ILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHHHTTTCEEEEEEETTSCH----HHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHcCCeeEEEEeCCCCH----HHHHHHHHHHHHcCCCEEEEC
Confidence 466677776 56788887644333 246789999999999888644
No 298
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=39.50 E-value=1.4e+02 Score=23.69 Aligned_cols=87 Identities=13% Similarity=0.047 Sum_probs=49.2
Q ss_pred HHHHhcCCCCeEEEcC-CCC---cchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEe-CCCCCccccccHH
Q 021783 6 AVTHLLGTGEEIVAGD-DLY---GGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE-SPTNPRQQICDIR 80 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~-~~~---~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~-~~~n~tG~~~~~~ 80 (307)
++..+++.|.+|.+.. ..- +.....+.. ....|++++..+..|.+.+.+++.. ...|+.+ ....+........
T Consensus 20 l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~l~~~~~~-~d~vi~~a~~~~~~~~~~~~~ 97 (313)
T 1qyd_A 20 IVNASISLGHPTYVLFRPEVVSNIDKVQMLLY-FKQLGAKLIEASLDDHQRLVDALKQ-VDVVISALAGGVLSHHILEQL 97 (313)
T ss_dssp HHHHHHHTTCCEEEECCSCCSSCHHHHHHHHH-HHTTTCEEECCCSSCHHHHHHHHTT-CSEEEECCCCSSSSTTTTTHH
T ss_pred HHHHHHhCCCcEEEEECCCcccchhHHHHHHH-HHhCCeEEEeCCCCCHHHHHHHHhC-CCEEEECCccccchhhHHHHH
Confidence 4445666676665433 221 111111111 2345788888888899999999874 3444433 3322212334467
Q ss_pred HHHHHHHHcC-CEEE
Q 021783 81 KIAEMAHAHG-ALLL 94 (307)
Q Consensus 81 ~l~~~~~~~~-~~li 94 (307)
.+.+.|++.| +.-+
T Consensus 98 ~l~~aa~~~g~v~~~ 112 (313)
T 1qyd_A 98 KLVEAIKEAGNIKRF 112 (313)
T ss_dssp HHHHHHHHSCCCSEE
T ss_pred HHHHHHHhcCCCceE
Confidence 8899999988 5333
No 299
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=39.27 E-value=20 Score=32.45 Aligned_cols=27 Identities=19% Similarity=0.399 Sum_probs=23.4
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
|...+++++++-||++|+.||.|-++.
T Consensus 216 Gt~~df~~lv~~~H~~Gi~VilD~V~N 242 (583)
T 1ea9_C 216 GDKDTLKKLVDLCHERGIRVLLDAVFN 242 (583)
T ss_dssp CCHHHHHHHHHHHTTTTCEEEEECCCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccc
Confidence 445569999999999999999999964
No 300
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=39.16 E-value=19 Score=32.26 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=26.0
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 71 NPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 71 n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
...|...+++++++.||++|+.||.|-+..
T Consensus 74 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 103 (557)
T 1zja_A 74 KEYGTMEDFDRLMAELKKRGMRLMVDVVIN 103 (557)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 345777789999999999999999999963
No 301
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=38.67 E-value=20 Score=32.46 Aligned_cols=28 Identities=11% Similarity=0.234 Sum_probs=24.1
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.|...+++++++.||++|+.||.|-++.
T Consensus 219 ~Gt~~df~~lv~~~H~~Gi~VilD~V~N 246 (588)
T 1j0h_A 219 FGDKETLKTLIDRCHEKGIRVMLDAVFN 246 (588)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 3555579999999999999999999964
No 302
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=38.67 E-value=21 Score=27.77 Aligned_cols=54 Identities=4% Similarity=-0.045 Sum_probs=35.4
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcCCCceEEEEeCCC
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPT 70 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~~~~~~v~~~~~~ 70 (307)
|.+|+++.|...+.. +...++..|++++.+|.. +.+++...+. +...+++++++
T Consensus 1 G~~vlvtRp~~~~~~--l~~~L~~~G~~~~~~P~i~i~~~~~~~~~~~~l~-~~d~viftS~~ 60 (240)
T 3mw8_A 1 GMKLLLTRPEGKNAA--MASALDALAIPYLVEPLLSVEAAAVTQAQLDELS-RADILIFISTS 60 (240)
T ss_dssp CCCEEECSCTTSCHH--HHHHHHHHTCCEEECCSCEEEECCCCHHHHHHHT-TCSEEEECSHH
T ss_pred CCEEEEeCChHHhHH--HHHHHHHCCCcEEEeCcEEEeccccHHHHHHHhc-CCCEEEEECHH
Confidence 678999998765443 346678889999998873 3444333443 45667765543
No 303
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=38.33 E-value=16 Score=25.95 Aligned_cols=21 Identities=14% Similarity=0.316 Sum_probs=18.3
Q ss_pred HHHHHHHHHcCCEEEEeCccC
Q 021783 80 RKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 80 ~~l~~~~~~~~~~li~D~a~~ 100 (307)
+++.++|+++|+.++-+.+.+
T Consensus 107 ~~~~~~a~~~Gir~vgpnc~g 127 (140)
T 1iuk_A 107 PEFEKALKEAGIPVVADRCLM 127 (140)
T ss_dssp HHHHHHHHHTTCCEEESCCHH
T ss_pred HHHHHHHHHcCCEEEcCCccc
Confidence 889999999999999887753
No 304
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=38.21 E-value=18 Score=32.67 Aligned_cols=28 Identities=18% Similarity=0.360 Sum_probs=24.1
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.|...+++++++-||++|+.||.|-++.
T Consensus 216 ~Gt~~dfk~lv~~~H~~Gi~VilD~V~N 243 (585)
T 1wzl_A 216 FGDLPTFRRLVDEAHRRGIKIILDAVFN 243 (585)
T ss_dssp TCCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 3555679999999999999999999864
No 305
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=38.02 E-value=40 Score=26.89 Aligned_cols=65 Identities=15% Similarity=0.127 Sum_probs=42.0
Q ss_pred hHHHHhhhcccCCcEEEEecCCChHH----HHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE-Ee
Q 021783 27 TDRLLSRVTPKTGVVVKRVNTCDLDE----VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL-VD 96 (307)
Q Consensus 27 ~~~~~~~~~~~~g~~~~~v~~~d~~~----l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li-~D 96 (307)
....+...++..|.++..+...|.+. ++..+..+...|++..... . ......+.+++.|+++| +|
T Consensus 20 ~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~-~----~~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 20 EWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDP-K----LGSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHTTCCEEEEECSCG-G----GHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc-h----hhHHHHHHHHHCCCcEEEeC
Confidence 33445677788899998887766543 4444446778888764322 1 34555666778899887 44
No 306
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=37.84 E-value=23 Score=32.19 Aligned_cols=28 Identities=7% Similarity=0.128 Sum_probs=24.7
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCcc
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~ 99 (307)
..|...+++++++-||++|+.||.|-+.
T Consensus 204 ~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 231 (599)
T 3bc9_A 204 KYGTKGELENAIDALHNNDIKVYFDAVL 231 (599)
T ss_dssp TTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3566678999999999999999999995
No 307
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=37.63 E-value=13 Score=29.37 Aligned_cols=55 Identities=15% Similarity=-0.018 Sum_probs=36.8
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC------ChHHHHhhcC--CCceEEEEeCCC
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIG--PWTKLVWVESPT 70 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~l~--~~~~~v~~~~~~ 70 (307)
|.+|+++.|...+ ..+...++..|++++.+|.. +.+.+++.+. .+...+++++++
T Consensus 6 g~~vlvtRp~~~~--~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~~ 68 (254)
T 4es6_A 6 GWRLLLTRPDEEC--AALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKP 68 (254)
T ss_dssp CCEEEECSCHHHH--HHHHHHHHHTTCEEEECCSCEEEECCCCHHHHHHHHTGGGCSEEEECSHH
T ss_pred CCEEEEeCChHHh--HHHHHHHHHCCCcEEEeCCEEEeeCcChHHHHHHHHhccCCCEEEEECHH
Confidence 7899999986533 23447788899999999873 4445555543 345677766543
No 308
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=37.29 E-value=54 Score=26.30 Aligned_cols=70 Identities=9% Similarity=0.130 Sum_probs=44.5
Q ss_pred CCCCcchHHHHhhhcccCCcEEEEecCC-ChH----HHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 21 DDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLD----EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~----~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
++-|......+...++..|.++...... |.+ .++..+..+...|++..... . ...+..+.+++.++++|.
T Consensus 14 ~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~-~----~~~~~~~~~~~~~iPvV~ 88 (313)
T 3m9w_A 14 LERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNG-Q----VLSNVVKEAKQEGIKVLA 88 (313)
T ss_dssp SSTTHHHHHHHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSST-T----SCHHHHHHHHTTTCEEEE
T ss_pred ChHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh-h----hhHHHHHHHHHCCCeEEE
Confidence 3445555566778888899998887764 443 34444456777887764332 1 234556667788988874
No 309
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=37.12 E-value=27 Score=24.79 Aligned_cols=40 Identities=23% Similarity=0.405 Sum_probs=25.7
Q ss_pred HHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCcc
Q 021783 53 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 53 l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~ 99 (307)
+++.+....+.+++.. |. .-+++.+.|+++|+.++-+.+.
T Consensus 94 v~~~~~~gi~~i~~~~-----g~--~~~~l~~~a~~~Gi~vvGpnc~ 133 (144)
T 2d59_A 94 VEQAIKKGAKVVWFQY-----NT--YNREASKKADEAGLIIVANRCM 133 (144)
T ss_dssp HHHHHHHTCSEEEECT-----TC--CCHHHHHHHHHTTCEEEESCCH
T ss_pred HHHHHHcCCCEEEECC-----Cc--hHHHHHHHHHHcCCEEEcCCch
Confidence 3344444455665431 22 2578999999999998877764
No 310
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=36.72 E-value=22 Score=32.91 Aligned_cols=31 Identities=19% Similarity=0.275 Sum_probs=26.4
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 70 TNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 70 ~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+...|...+++++++-||++|+.||.|-+..
T Consensus 109 dp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~N 139 (686)
T 1d3c_A 109 NPAYGTIADFQNLIAAAHAKNIKVIIDFAPN 139 (686)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEeCcC
Confidence 3445777789999999999999999999963
No 311
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=36.54 E-value=78 Score=25.04 Aligned_cols=80 Identities=4% Similarity=0.057 Sum_probs=43.9
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEe-cCC-ChHHHHhhcCCCceEEEEeCCCCCcccccc----HHHHHHHHHH
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV-NTC-DLDEVASAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHA 88 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~-d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~----~~~l~~~~~~ 88 (307)
|-+++++..+.. ...+...++..|..++.+ ... +.+.+++........+++.+....||...+ +.++.+-+++
T Consensus 118 dG~IipDLP~eE-~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~ 196 (252)
T 3tha_A 118 CALIVPELSFEE-SDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRS 196 (252)
T ss_dssp EEEECTTCCGGG-CHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHT
T ss_pred CEEEeCCCCHHH-HHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHH
Confidence 667777765533 344556677777766553 222 345555554444455666555455676543 4455555555
Q ss_pred c-CCEEEE
Q 021783 89 H-GALLLV 95 (307)
Q Consensus 89 ~-~~~li~ 95 (307)
+ +.++++
T Consensus 197 ~~~~Pv~v 204 (252)
T 3tha_A 197 FTNLPIFV 204 (252)
T ss_dssp TCCSCEEE
T ss_pred hcCCcEEE
Confidence 4 455555
No 312
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=36.47 E-value=1e+02 Score=24.30 Aligned_cols=84 Identities=12% Similarity=0.109 Sum_probs=44.3
Q ss_pred hhcccCCcEEEEe--cCCChHHHHhhcCCCceEEEEe--CCCCCccccc---c---HHHHHHHHHHc--CCEEEEeCccC
Q 021783 33 RVTPKTGVVVKRV--NTCDLDEVASAIGPWTKLVWVE--SPTNPRQQIC---D---IRKIAEMAHAH--GALLLVDNSIM 100 (307)
Q Consensus 33 ~~~~~~g~~~~~v--~~~d~~~l~~~l~~~~~~v~~~--~~~n~tG~~~---~---~~~l~~~~~~~--~~~li~D~a~~ 100 (307)
+.++..|.++-.. |....+.+++.+. ....|++- +|.. .|... . ++++.+++.++ ++.+-+|+--.
T Consensus 128 ~~ir~~G~k~Gvalnp~Tp~e~l~~~l~-~vD~VlvMsV~PGf-gGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~ 205 (246)
T 3inp_A 128 QLIKSFGIQAGLALNPATGIDCLKYVES-NIDRVLIMSVNPGF-GGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN 205 (246)
T ss_dssp HHHHTTTSEEEEEECTTCCSGGGTTTGG-GCSEEEEECSCTTC---CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC
T ss_pred HHHHHcCCeEEEEecCCCCHHHHHHHHh-cCCEEEEeeecCCC-CCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC
Confidence 4456677664332 2234555555544 23344433 3433 34432 2 45555555554 58888998665
Q ss_pred CCCcCCccCCCccEEEec
Q 021783 101 SPVLSRPLELGADIVMHS 118 (307)
Q Consensus 101 ~~~~~~~~~~~~d~~~~s 118 (307)
........+.|+|+++.+
T Consensus 206 ~~ti~~~~~aGAD~~V~G 223 (246)
T 3inp_A 206 PYNIAEIAVCGVNAFVAG 223 (246)
T ss_dssp TTTHHHHHTTTCCEEEES
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 444445556788887765
No 313
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=36.37 E-value=18 Score=31.11 Aligned_cols=29 Identities=17% Similarity=0.186 Sum_probs=26.1
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
..|...+++++++.||++|+.||.|-+..
T Consensus 70 ~~G~~~d~~~lv~~~h~~Gi~VilD~V~N 98 (422)
T 1ua7_A 70 YLGTEQEFKEMCAAAEEYGIKVIVDAVIN 98 (422)
T ss_dssp TTEEHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 35888899999999999999999999964
No 314
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=36.23 E-value=57 Score=25.97 Aligned_cols=66 Identities=12% Similarity=0.035 Sum_probs=38.4
Q ss_pred CCcEEEEecC-C-ChHHHHhhcC-----CCceEEEEe----CCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCC
Q 021783 38 TGVVVKRVNT-C-DLDEVASAIG-----PWTKLVWVE----SPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV 103 (307)
Q Consensus 38 ~g~~~~~v~~-~-d~~~l~~~l~-----~~~~~v~~~----~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~ 103 (307)
.|.++..=.. . +++++..++. .+..++++. ...|.+-...++..+..+.+..++++|.|..|+.|.
T Consensus 129 ~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 129 VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 5554433222 2 5666666553 234455544 222323344567778777777788888999998664
No 315
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=36.21 E-value=23 Score=32.82 Aligned_cols=30 Identities=17% Similarity=0.141 Sum_probs=25.7
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 71 NPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 71 n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
...|...+++++++-||++|+.||.|-+..
T Consensus 102 p~~Gt~~df~~Lv~~aH~~GikVilD~V~N 131 (686)
T 1qho_A 102 EHFGNWTTFDTLVNDAHQNGIKVIVDFVPN 131 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 345667789999999999999999999963
No 316
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=36.14 E-value=19 Score=32.43 Aligned_cols=29 Identities=14% Similarity=0.156 Sum_probs=24.7
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
..|...+++++++.||++|+.||.|-+..
T Consensus 88 ~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 116 (570)
T 1m53_A 88 EYGTMEDFDSLVAEMKKRNMRLMIDVVIN 116 (570)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 34666679999999999999999999963
No 317
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=36.14 E-value=51 Score=28.47 Aligned_cols=85 Identities=9% Similarity=0.021 Sum_probs=58.9
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccC--CcEEEEecC--CChHHHHhhcCCC-ceEEEEeCCCCCccccccHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~--~d~~~l~~~l~~~-~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
.+.+=+-+.+.+|..+..+..|..+.+.. .++++-=+. .+++++.+.+..+ ..+|.+. + |-.|-+.+..++++
T Consensus 284 ~l~~y~i~~iEdPl~~~D~~g~~~l~~~~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i~ik-~-~~~GGitea~~i~~ 361 (432)
T 2ptz_A 284 WAHDYPIVSIEDPYDQDDFAGFAGITEALKGKTQIVGDDLTVTNTERIKMAIEKKACNSLLLK-I-NQIGTISEAIASSK 361 (432)
T ss_dssp HHHHSCEEEEECCSCTTCHHHHHHHHHHTTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-H-HHHCCHHHHHHHHH
T ss_pred HHHhCCceEEECCCCcchHHHHHHHHHhcCCCCeEEecCcccCCHHHHHHHHHcCCCCEEEec-c-cccCCHHHHHHHHH
Confidence 44444577899998877777777777777 566643333 4678888888643 3444443 2 34688888999999
Q ss_pred HHHHcCCEEEEe
Q 021783 85 MAHAHGALLLVD 96 (307)
Q Consensus 85 ~~~~~~~~li~D 96 (307)
+|+++|+.+++=
T Consensus 362 lA~~~g~~v~~~ 373 (432)
T 2ptz_A 362 LCMENGWSVMVS 373 (432)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHcCCeEEec
Confidence 999999988663
No 318
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=35.58 E-value=24 Score=32.05 Aligned_cols=28 Identities=18% Similarity=0.153 Sum_probs=24.2
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.|...+++++++-||++|+.||.|-+.-
T Consensus 195 ~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 222 (601)
T 3edf_A 195 YGSNEDFVRLSTEARKRGMGLIQDVVLS 222 (601)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEECCc
Confidence 3556679999999999999999999953
No 319
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=35.45 E-value=24 Score=32.67 Aligned_cols=31 Identities=19% Similarity=0.251 Sum_probs=26.3
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 70 TNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 70 ~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+...|...+++++++-||++|+.||.|-+.-
T Consensus 110 dp~~Gt~~dfk~Lv~~aH~~GikVilD~V~N 140 (683)
T 3bmv_A 110 NPYFGSFTDFQNLINTAHAHNIKVIIDFAPN 140 (683)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEccc
Confidence 3345777789999999999999999999963
No 320
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=35.30 E-value=45 Score=26.20 Aligned_cols=49 Identities=18% Similarity=0.267 Sum_probs=33.0
Q ss_pred hHHHHhhcCCCceEEEEeCCCCC---------cccccc-HHHHHHHHHHcCCEEEEeCc
Q 021783 50 LDEVASAIGPWTKLVWVESPTNP---------RQQICD-IRKIAEMAHAHGALLLVDNS 98 (307)
Q Consensus 50 ~~~l~~~l~~~~~~v~~~~~~n~---------tG~~~~-~~~l~~~~~~~~~~li~D~a 98 (307)
.+.+++++....++|-+-..+.+ ...... .+++.++|++|++.+|+++-
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd~ 104 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVNDR 104 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEESC
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeCH
Confidence 35667777777777777655422 222222 57899999999999998653
No 321
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=35.17 E-value=59 Score=29.16 Aligned_cols=75 Identities=9% Similarity=0.006 Sum_probs=43.9
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-ChHHHHhhcCCCceEEEEe-CCCCCccccc--cHHHHHHHHHHcC
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIGPWTKLVWVE-SPTNPRQQIC--DIRKIAEMAHAHG 90 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l~~~~~~v~~~-~~~n~tG~~~--~~~~l~~~~~~~~ 90 (307)
++|++-+..- .+...+...++..|+..+.++.+ +++++. ..+...|+++ .|.++...-. -.+++.+.+.+.+
T Consensus 8 ~~IlilD~Gs-~~~~~I~r~lre~Gv~~eiv~~~~~~~~i~---~~~~dgIIlsGGp~s~~~~~~~~~~~~l~~~a~~~g 83 (556)
T 3uow_A 8 DKILVLNFGS-QYFHLIVKRLNNIKIFSETKDYGVELKDIK---DMNIKGVILSGGPYSVTEAGSPHLKKEVFEYFLEKK 83 (556)
T ss_dssp CEEEEEESSC-TTHHHHHHHHHHTTCCEEEEETTCCGGGTT---TSCEEEEEECCCSCCTTSTTCCCCCHHHHHHHHHTT
T ss_pred CEEEEEECCC-ccHHHHHHHHHHCCCeEEEEECCCCHHHHh---hcCCCEEEECCCCCcccccCCcchhHHHHHHhhhcC
Confidence 6788877653 23334446677889988888764 455443 2366788887 4555432211 1345666665555
Q ss_pred CEE
Q 021783 91 ALL 93 (307)
Q Consensus 91 ~~l 93 (307)
+++
T Consensus 84 ~Pv 86 (556)
T 3uow_A 84 IPI 86 (556)
T ss_dssp CCE
T ss_pred CCE
Confidence 444
No 322
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=35.16 E-value=24 Score=32.60 Aligned_cols=30 Identities=20% Similarity=0.359 Sum_probs=25.8
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCcc
Q 021783 70 TNPRQQICDIRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 70 ~n~tG~~~~~~~l~~~~~~~~~~li~D~a~ 99 (307)
+...|...+++++++-||++|+.||.|-+.
T Consensus 105 dp~~Gt~~df~~Lv~~aH~~GIkVilD~V~ 134 (680)
T 1cyg_A 105 NPFFGTLSDFQRLVDAAHAKGIKVIIDFAP 134 (680)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 334577778999999999999999999995
No 323
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=35.09 E-value=24 Score=31.71 Aligned_cols=29 Identities=14% Similarity=0.141 Sum_probs=25.1
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
..|...+++++++.||++|+.||.|-+..
T Consensus 74 ~~Gt~~df~~lv~~~h~~Gi~VilD~V~N 102 (558)
T 1uok_A 74 EFGTMEDWDELLHEMHERNMKLMMDLVVN 102 (558)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 35666789999999999999999999963
No 324
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=34.82 E-value=23 Score=33.85 Aligned_cols=26 Identities=15% Similarity=0.347 Sum_probs=23.0
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.+.+++++++-||++|+-||.|-++.
T Consensus 368 ~~~efk~lV~~~H~~GI~VILDvV~N 393 (877)
T 3faw_A 368 RIAELKQLIHDIHKRGMGVILDVVYN 393 (877)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHHcCCEEEEEEeec
Confidence 35679999999999999999999974
No 325
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=34.69 E-value=45 Score=28.84 Aligned_cols=84 Identities=12% Similarity=0.026 Sum_probs=56.1
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCC--cEEEEecC--CChHHHHhhcCCC-ceEEEEeCCCCCccccccHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~--~d~~~l~~~l~~~-~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
++.+=+-+.+.+|.....+..|..+.+..+ +.++-=+. .+++++.+.+..+ ...+.+. + |-.|.+.+..++++
T Consensus 275 ll~~y~i~~IEdPl~~dD~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iK-v-~~iGGiTealkia~ 352 (428)
T 3tqp_A 275 WTKKYPVISIEDGLSENDWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILVK-L-NQIGTLTETLATVG 352 (428)
T ss_dssp HHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-H-HHHCCHHHHHHHHH
T ss_pred HHhhcccceEeCCCCcccHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEec-c-cccCCHHHHHHHHH
Confidence 445445778888877766767777766666 33332221 2678888887643 3444433 2 34688888999999
Q ss_pred HHHHcCCEEEE
Q 021783 85 MAHAHGALLLV 95 (307)
Q Consensus 85 ~~~~~~~~li~ 95 (307)
+|+++|+.+++
T Consensus 353 lA~~~G~~~~v 363 (428)
T 3tqp_A 353 LAKSNKYGVII 363 (428)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHcCCeEEE
Confidence 99999998766
No 326
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=34.47 E-value=1.3e+02 Score=21.84 Aligned_cols=36 Identities=11% Similarity=0.028 Sum_probs=25.4
Q ss_pred hhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 021783 55 SAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 94 (307)
Q Consensus 55 ~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li 94 (307)
..++++.-+|+++. +|...++-+.++.+++.|+.+|
T Consensus 106 ~~~~~~Dvvi~iS~----sG~t~~~~~~~~~ak~~g~~vi 141 (188)
T 1tk9_A 106 ALGNEKDVLIGIST----SGKSPNVLEALKKAKELNMLCL 141 (188)
T ss_dssp HHCCTTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEE
T ss_pred HhCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEE
Confidence 34566666666542 4777788899999999997654
No 327
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=40.68 E-value=8.4 Score=24.98 Aligned_cols=24 Identities=17% Similarity=0.153 Sum_probs=20.0
Q ss_pred ccHHHHHHHHHHcCCEEEEeCccC
Q 021783 77 CDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 77 ~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.--.+|.++|+++|++++.|-.-+
T Consensus 27 ~~A~~I~e~A~e~~VPi~e~~~LA 50 (87)
T 3b1s_B 27 TIAQKIVEIAENYSIPVVRKPELA 50 (87)
Confidence 346789999999999999998644
No 328
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=34.34 E-value=21 Score=34.75 Aligned_cols=25 Identities=16% Similarity=0.288 Sum_probs=22.7
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccC
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
..+++++++.||++|+-||.|-++.
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~N 585 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYN 585 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCEEEEEEecc
Confidence 5679999999999999999999974
No 329
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=34.12 E-value=26 Score=31.71 Aligned_cols=29 Identities=21% Similarity=0.130 Sum_probs=24.9
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
..|...+++++++.||++|+.||.|-+..
T Consensus 83 ~~Gt~~df~~lv~~~h~~Gi~VilD~V~N 111 (589)
T 3aj7_A 83 TYGTNEDCFALIEKTHKLGMKFITDLVIN 111 (589)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 34666679999999999999999999953
No 330
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=34.07 E-value=77 Score=27.30 Aligned_cols=82 Identities=10% Similarity=0.029 Sum_probs=56.8
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccC--CcEEEEec--CCChHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHH
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVN--TCDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHA 88 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~--~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~~~~l~~~~~~ 88 (307)
=+-..+.+|..+.....+..+.+.. .+++..=+ ..++.++.+.+.. ...++.+. + +-.|-+.+..+++++|++
T Consensus 283 ~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~ik-~-~~~GGite~~~i~~~A~~ 360 (431)
T 2fym_A 283 YPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIK-F-NQIGSLTETLAAIKMAKD 360 (431)
T ss_dssp SCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-G-GGTCSHHHHHHHHHHHHH
T ss_pred CCceEEECCCCcccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEEC-c-cccCCHHHHHHHHHHHHH
Confidence 3467888998776666666666666 55655433 1377888888863 34445443 3 346888889999999999
Q ss_pred cCCEEEEeC
Q 021783 89 HGALLLVDN 97 (307)
Q Consensus 89 ~~~~li~D~ 97 (307)
+|+.+++-.
T Consensus 361 ~g~~~~~~h 369 (431)
T 2fym_A 361 AGYTAVISH 369 (431)
T ss_dssp TTCEEEEEC
T ss_pred CCCeEEEeC
Confidence 999887644
No 331
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=34.03 E-value=21 Score=32.68 Aligned_cols=29 Identities=3% Similarity=-0.066 Sum_probs=24.5
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
..|...+++++++-||++|+.||.|-+..
T Consensus 281 ~~Gt~~df~~LV~~aH~~GI~VIlD~V~N 309 (645)
T 4aef_A 281 RLGGDRAFVDLLSELKRFDIKVILDGVFH 309 (645)
T ss_dssp GGTCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCHHHHHHHHHHhhhcCCEEEEEeccc
Confidence 34555579999999999999999999964
No 332
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=33.59 E-value=31 Score=31.56 Aligned_cols=27 Identities=26% Similarity=0.326 Sum_probs=23.0
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
|...+++++++-||++|+.||.|-+..
T Consensus 160 Gt~~d~~~Lv~~ah~~GI~VilD~V~N 186 (628)
T 1g5a_A 160 GTIGDLREVIAALHEAGISAVVDFIFN 186 (628)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 444569999999999999999999963
No 333
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=33.31 E-value=23 Score=32.25 Aligned_cols=27 Identities=19% Similarity=0.203 Sum_probs=23.3
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
|...+++++++-||++|+.||.|-++.
T Consensus 190 Gt~~d~~~lv~~~H~~Gi~VilD~V~N 216 (602)
T 2bhu_A 190 GRPEDLMALVDAAHRLGLGVFLDVVYN 216 (602)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 444569999999999999999999975
No 334
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=33.18 E-value=31 Score=32.77 Aligned_cols=30 Identities=20% Similarity=0.151 Sum_probs=26.9
Q ss_pred CCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 71 NPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 71 n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
...|...+++++++.||++|+-||.|-+..
T Consensus 687 ~~~Gt~~df~~lv~~~H~~GI~VilD~V~N 716 (844)
T 3aie_A 687 NKYGTADDLVKAIKALHSKGIKVMADWVPD 716 (844)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 556888899999999999999999999964
No 335
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=32.70 E-value=25 Score=24.42 Aligned_cols=25 Identities=12% Similarity=0.228 Sum_probs=20.4
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCc
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNS 98 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a 98 (307)
|.-.--.+|.++|+++|++++.|-.
T Consensus 68 G~~~~A~~I~~~A~e~~VPi~e~~~ 92 (123)
T 2jli_A 68 YTDAQVQTVRKIAEEEGVPILQRIP 92 (123)
T ss_dssp EETHHHHHHHHHHHHHTCCEEECHH
T ss_pred eCCHHHHHHHHHHHHcCCCEEeCHH
Confidence 3333477899999999999999975
No 336
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=32.68 E-value=45 Score=29.85 Aligned_cols=47 Identities=19% Similarity=0.340 Sum_probs=33.8
Q ss_pred HHHHhhcCCCceEEEEeCCCCCcccccc-HHHHHHHHHHcCCEEEEeC
Q 021783 51 DEVASAIGPWTKLVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDN 97 (307)
Q Consensus 51 ~~l~~~l~~~~~~v~~~~~~n~tG~~~~-~~~l~~~~~~~~~~li~D~ 97 (307)
+.+++++....++|-+--.+.+...... .+++.++|++|++.+++++
T Consensus 29 ~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~v~liIND 76 (540)
T 3nl6_A 29 GQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIIND 76 (540)
T ss_dssp HHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhcCCEEEEeC
Confidence 5677777766777777655554444443 6788999999999888866
No 337
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=32.61 E-value=25 Score=31.47 Aligned_cols=29 Identities=14% Similarity=0.237 Sum_probs=25.0
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
..|...+++++++.||++|+.||.|-+..
T Consensus 74 ~~Gt~~df~~lv~~~h~~Gi~VilD~V~N 102 (543)
T 2zic_A 74 IFGNMADMDNLLTQAKMRGIKIIMDLVVN 102 (543)
T ss_dssp GGCCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 34666789999999999999999999953
No 338
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A*
Probab=32.54 E-value=34 Score=33.27 Aligned_cols=32 Identities=13% Similarity=0.048 Sum_probs=28.2
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 69 PTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 69 ~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+....|...+++++++.||++|+.||.|-++-
T Consensus 905 i~~~yGt~edfk~LV~alH~~GI~VIlDvV~N 936 (1108)
T 3ttq_A 905 TPTKYGTDGDLRATIQALHHANMQVMADVVDN 936 (1108)
T ss_dssp SCCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 45667888899999999999999999999963
No 339
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=32.34 E-value=36 Score=31.53 Aligned_cols=27 Identities=15% Similarity=0.160 Sum_probs=23.2
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
|...+++++++-||++|+.||.|-++.
T Consensus 318 Gt~edfk~LV~~aH~~GI~VilD~V~N 344 (695)
T 3zss_A 318 GTLDDFDHFVTEAGKLGLEIALDFALQ 344 (695)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeecc
Confidence 444569999999999999999999864
No 340
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A
Probab=32.21 E-value=33 Score=33.39 Aligned_cols=32 Identities=19% Similarity=0.102 Sum_probs=27.6
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 69 PTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 69 ~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+..+.|...+++++++.||++|+.||.|-++-
T Consensus 738 i~~~~Gt~~efk~lV~alH~~GI~VIlDvV~N 769 (1039)
T 3klk_A 738 TPNKYGSDEDLRNALQALHKAGLQAIADWVPD 769 (1039)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 34456888899999999999999999999964
No 341
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=31.96 E-value=40 Score=23.71 Aligned_cols=39 Identities=18% Similarity=0.285 Sum_probs=25.6
Q ss_pred hhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 55 SAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 55 ~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+.+....+.+++... . .-+++.+.|+++|+.++-+.+.+
T Consensus 88 ~~~~~g~~~i~~~~~-----~--~~~~l~~~a~~~Gi~~igpnc~g 126 (138)
T 1y81_A 88 EAVEAGFKKLWFQPG-----A--ESEEIRRFLEKAGVEYSFGRCIM 126 (138)
T ss_dssp HHHHTTCCEEEECTT-----S--CCHHHHHHHHHHTCEEECSCCHH
T ss_pred HHHHcCCCEEEEcCc-----c--HHHHHHHHHHHCCCEEEcCCcce
Confidence 333445566665431 1 14889999999999988767643
No 342
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=31.93 E-value=23 Score=31.80 Aligned_cols=29 Identities=21% Similarity=0.259 Sum_probs=25.1
Q ss_pred CccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
..|...+++++++.||++|+.||.|-+..
T Consensus 74 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 102 (555)
T 2ze0_A 74 EFGTMDDFDELLAQAHRRGLKVILDLVIN 102 (555)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 45667789999999999999999999963
No 343
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=31.83 E-value=26 Score=32.12 Aligned_cols=25 Identities=16% Similarity=0.169 Sum_probs=22.7
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccC
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
..+++++++.||++|+-||.|-++.
T Consensus 181 ~~~~~~lv~~~H~~Gi~VilD~V~n 205 (637)
T 1gjw_A 181 DEEFKAFVEACHILGIRVILDFIPR 205 (637)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcC
Confidence 5679999999999999999999974
No 344
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=31.57 E-value=1.1e+02 Score=24.48 Aligned_cols=11 Identities=18% Similarity=0.154 Sum_probs=4.8
Q ss_pred ccCCcEEEEec
Q 021783 36 PKTGVVVKRVN 46 (307)
Q Consensus 36 ~~~g~~~~~v~ 46 (307)
...|+.-+.++
T Consensus 120 ~~aGvdgvii~ 130 (267)
T 3vnd_A 120 QAAGVDSVLIA 130 (267)
T ss_dssp HHHTCCEEEET
T ss_pred HHcCCCEEEeC
Confidence 33455444443
No 345
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=31.31 E-value=53 Score=28.57 Aligned_cols=84 Identities=14% Similarity=0.109 Sum_probs=55.8
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCC--cEEEEecCC--ChHHHHhhcCCC-ceEEEEeCCCCCccccccHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTC--DLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~--d~~~l~~~l~~~-~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
++.+=+-+.+.+|.....+..|..+.+..+ +.+.-=+.. ++.++.+.+..+ ...+.+. + |-.|-+.+..++++
T Consensus 301 lle~y~i~~IEdPl~~dD~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iK-v-~~iGGiTea~kia~ 378 (449)
T 3uj2_A 301 LCERYPIVSIEDGLDEEDWEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIK-L-NQIGTVSETLEAIK 378 (449)
T ss_dssp HHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-H-HHHCSHHHHHHHHH
T ss_pred HHHhcCceEEECCCCcchHHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEEC-c-cccCCHHHHHHHHH
Confidence 445555778888877766666766666663 444332222 588888887643 3444443 2 34688888999999
Q ss_pred HHHHcCCEEEE
Q 021783 85 MAHAHGALLLV 95 (307)
Q Consensus 85 ~~~~~~~~li~ 95 (307)
+|+++|+.+++
T Consensus 379 lA~~~Gi~~~v 389 (449)
T 3uj2_A 379 MAHKAGYTAVV 389 (449)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHcCCeEEE
Confidence 99999998665
No 346
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=31.30 E-value=81 Score=26.36 Aligned_cols=37 Identities=19% Similarity=0.197 Sum_probs=23.3
Q ss_pred CCceEEEEeCCCCCcc---------cc----------ccHHHHHHHHHHcCCEEEE
Q 021783 59 PWTKLVWVESPTNPRQ---------QI----------CDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG---------~~----------~~~~~l~~~~~~~~~~li~ 95 (307)
.+.++|+++++..... .. .-+.+|..+++++|+.+|+
T Consensus 140 ~~~~lVVIDsl~~l~~~~e~~~~~g~~~~~~q~r~~~~~l~~L~~~a~~~~~~VI~ 195 (356)
T 1u94_A 140 GAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIF 195 (356)
T ss_dssp TCCSEEEEECGGGCCCHHHHTTC------CHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCCEEEEcCHHHhcchhhhccccccchhHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 4678899887665432 10 0155667778888887764
No 347
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=31.29 E-value=32 Score=33.07 Aligned_cols=29 Identities=14% Similarity=0.244 Sum_probs=24.7
Q ss_pred Cccc--cccHHHHHHHHHHcCCEEEEeCccC
Q 021783 72 PRQQ--ICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 72 ~tG~--~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
|.|. ..+++++++-||++|+.||.|-++.
T Consensus 525 p~Gt~~~~dfk~LV~~aH~~GI~VILDvV~N 555 (921)
T 2wan_A 525 PEGTARITELKQLIQSLHQQRIGVNMDVVYN 555 (921)
T ss_dssp SSTTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCCccHHHHHHHHHHHHHcCCEEEEEEccc
Confidence 3444 5689999999999999999999974
No 348
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=31.28 E-value=75 Score=23.79 Aligned_cols=84 Identities=10% Similarity=0.030 Sum_probs=35.3
Q ss_pred HHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHH
Q 021783 8 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH 87 (307)
Q Consensus 8 ~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~ 87 (307)
......|.+|++-.|.-.. ...........|.++...+..+.+++.+.+..+..+|+++=.+.-+-. .++.+.+++.
T Consensus 30 ~r~~~~g~kV~v~k~~~d~-r~~~~~i~s~~g~~~~a~~~~~~~~i~~~~~~~~dvViIDEaqfl~~~--~v~~l~~l~~ 106 (191)
T 1xx6_A 30 RRAKIAKQKIQVFKPEIDN-RYSKEDVVSHMGEKEQAVAIKNSREILKYFEEDTEVIAIDEVQFFDDE--IVEIVNKIAE 106 (191)
T ss_dssp HHHHHTTCCEEEEEEC--------CEEECTTSCEEECEEESSSTHHHHHCCTTCSEEEECSGGGSCTH--HHHHHHHHHH
T ss_pred HHHHHCCCEEEEEEeccCc-cchHHHHHhhcCCceeeEeeCCHHHHHHHHhccCCEEEEECCCCCCHH--HHHHHHHHHh
Confidence 3344456666655433211 111113344455554433334444555554434556666533331100 1334444444
Q ss_pred HcCCEEEE
Q 021783 88 AHGALLLV 95 (307)
Q Consensus 88 ~~~~~li~ 95 (307)
+ |+.+|.
T Consensus 107 ~-~~~Vi~ 113 (191)
T 1xx6_A 107 S-GRRVIC 113 (191)
T ss_dssp T-TCEEEE
T ss_pred C-CCEEEE
Confidence 3 666665
No 349
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=31.22 E-value=29 Score=32.12 Aligned_cols=28 Identities=14% Similarity=0.303 Sum_probs=24.0
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.|...+++++++-||++|+.||.|.+..
T Consensus 308 ~Gt~~df~~Lv~~aH~~GikVilD~V~N 335 (696)
T 4aee_A 308 LGTMEDFEKLVQVLHSRKIKIVLDITMH 335 (696)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEecccc
Confidence 3555679999999999999999999953
No 350
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=31.20 E-value=34 Score=22.47 Aligned_cols=34 Identities=15% Similarity=0.103 Sum_probs=20.3
Q ss_pred HHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEec
Q 021783 8 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 46 (307)
Q Consensus 8 ~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~ 46 (307)
-.+++|||.|++-.+.+..-. . ++.+.-++++++
T Consensus 52 Arl~~~GD~vII~aY~~~~~~----e-~~~~~P~vV~vd 85 (96)
T 1vc3_B 52 AHLVKPGDLVILVAYGVFDEE----E-ARNLKPTVVLVD 85 (96)
T ss_dssp GGTCCTTCEEEEEEEEEECHH----H-HTTCCCEEEEEC
T ss_pred HccCCCCCEEEEEECccCCHH----H-HhcCCCEEEEEC
Confidence 347789999998776664432 1 234444555544
No 351
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=31.18 E-value=27 Score=24.78 Aligned_cols=20 Identities=15% Similarity=0.120 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCCEEEEeCc
Q 021783 79 IRKIAEMAHAHGALLLVDNS 98 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~D~a 98 (307)
-.+|.++|+++|++++.|-.
T Consensus 83 A~~I~e~A~e~gVPi~e~~~ 102 (137)
T 3bzs_A 83 ALQIIKLAELYDIPVIEDIP 102 (137)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 77899999999999999975
No 352
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=30.85 E-value=32 Score=31.39 Aligned_cols=28 Identities=18% Similarity=0.222 Sum_probs=23.8
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.|...+++++++-||++|+-||.|-++.
T Consensus 199 ~G~~~~~~~lv~~~H~~Gi~VilD~V~N 226 (618)
T 3m07_A 199 YGTPDDFKAFIDAAHGYGLSVVLDIVLN 226 (618)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEeecCc
Confidence 3444569999999999999999999975
No 353
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=30.80 E-value=30 Score=31.74 Aligned_cols=27 Identities=15% Similarity=0.080 Sum_probs=22.9
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
|...+++++++-||++|+.||.|-+..
T Consensus 153 Gt~~df~~Lv~~aH~~GI~VilD~V~N 179 (644)
T 3czg_A 153 GSNDDLVALTSRLREAGISLCADFVLN 179 (644)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 344469999999999999999999963
No 354
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=30.79 E-value=23 Score=26.66 Aligned_cols=60 Identities=17% Similarity=0.133 Sum_probs=38.9
Q ss_pred CcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcC----CCceEEEEeCCCCCccccccHHHHH
Q 021783 24 YGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKIA 83 (307)
Q Consensus 24 ~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~~~~l~ 83 (307)
+.++...+...++..|++++.... ||.+.+.+++. .+..+|+++.-..++-.-.-.+.+.
T Consensus 47 ~Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~~D~t~eal~ 112 (185)
T 3rfq_A 47 EDHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTPRDVTPESTR 112 (185)
T ss_dssp CCSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCCHHHHHH
T ss_pred cCcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCcccHHHHHH
Confidence 556666677888889998876543 68887776664 4567888876666543333333333
No 355
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=30.74 E-value=26 Score=31.91 Aligned_cols=27 Identities=26% Similarity=0.208 Sum_probs=23.4
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
|...+++++++-||++|+.||.|-++.
T Consensus 202 Gt~~~~~~lv~~~H~~Gi~VilD~V~N 228 (617)
T 1m7x_A 202 GTRDDFRYFIDAAHAAGLNVILDWVPG 228 (617)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 445569999999999999999999975
No 356
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=30.68 E-value=70 Score=25.01 Aligned_cols=62 Identities=11% Similarity=0.050 Sum_probs=40.1
Q ss_pred HHHHhhhcccCCcEEEEecCC-ChH----HHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE-EeC
Q 021783 28 DRLLSRVTPKTGVVVKRVNTC-DLD----EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL-VDN 97 (307)
Q Consensus 28 ~~~~~~~~~~~g~~~~~v~~~-d~~----~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li-~D~ 97 (307)
...+...++..|.++...... +.+ .++..+..+...|++..... .+..+.+++.++++| +|.
T Consensus 26 ~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--------~~~~~~l~~~~iPvV~i~~ 93 (276)
T 3jy6_A 26 FKGISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN--------PQTVQEILHQQMPVVSVDR 93 (276)
T ss_dssp HHHHHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC--------HHHHHHHHTTSSCEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc--------HHHHHHHHHCCCCEEEEec
Confidence 344667788899999888764 333 34444456778888764332 456667777888766 443
No 357
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=30.60 E-value=77 Score=25.96 Aligned_cols=69 Identities=13% Similarity=0.027 Sum_probs=43.9
Q ss_pred hcCCCCeEEEcCCCCcchHH---HHhhhcccCCcEEEEecCC-------------ChHHHHhhcC-CCceEEEEeCCCCC
Q 021783 10 LLGTGEEIVAGDDLYGGTDR---LLSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESPTNP 72 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~---~~~~~~~~~g~~~~~v~~~-------------d~~~l~~~l~-~~~~~v~~~~~~n~ 72 (307)
.+++||+|-+-.|+.+.... .....++..|.+++.-+.. -.++|.+++. ++.++|+...-..-
T Consensus 13 ~L~~Gd~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyg 92 (311)
T 1zl0_A 13 WQPIDGRVALIAPASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYG 92 (311)
T ss_dssp CCCCCSEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSSC
T ss_pred cCCCcCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEECccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCcC
Confidence 46899999988886654322 1224456689999876642 2456666664 67888887755444
Q ss_pred cccccc
Q 021783 73 RQQICD 78 (307)
Q Consensus 73 tG~~~~ 78 (307)
+-.+.|
T Consensus 93 a~rlLp 98 (311)
T 1zl0_A 93 CGQLLP 98 (311)
T ss_dssp GGGGTT
T ss_pred HHHHhh
Confidence 444444
No 358
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=30.60 E-value=24 Score=31.68 Aligned_cols=28 Identities=21% Similarity=0.214 Sum_probs=23.6
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.|...+++++++-||++|+-||.|-++.
T Consensus 164 ~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 191 (558)
T 3vgf_A 164 YGGPEGFRKLVDEAHKKGLGVILDVVYN 191 (558)
T ss_dssp GTHHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEEeec
Confidence 3444569999999999999999999974
No 359
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=30.44 E-value=60 Score=23.98 Aligned_cols=71 Identities=21% Similarity=0.225 Sum_probs=43.2
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcC---CCceEEEEeCCCCCccccccHHHHHHH
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
||+++- .-.+.++...+...++..|+++..... ||.+.+.+++. .+..+|+++.-..++-.-.-.+.+++.
T Consensus 12 GdEll~-G~i~DtN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~DlVittGG~g~~~~D~T~ea~a~~ 87 (172)
T 3kbq_A 12 GNEILK-GRTVNTNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEVSDLVVSSGGLGPTFDDMTVEGFAKC 87 (172)
T ss_dssp CHHHHT-TSSCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEEESCCSSSTTCCHHHHHHHH
T ss_pred cccccC-CcEEeHHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCEEEEcCCCcCCcccchHHHHHHH
Confidence 454432 223345555566778889998776553 68888877775 346788887766665443434444433
No 360
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=30.35 E-value=2.4e+02 Score=23.52 Aligned_cols=81 Identities=12% Similarity=0.070 Sum_probs=45.7
Q ss_pred eEEEcCCCCcchHHHHhhhcccCCcEEEEecC-CChHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEE
Q 021783 16 EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALL 93 (307)
Q Consensus 16 ~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~l 93 (307)
--.+..|..+.....+..+.+..+.++..-.. .+.+++++.+.. ...++.+. +. ..|-+....+++++|+++|+.+
T Consensus 216 i~~iEqP~~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k-~~-~~GGit~~~~i~~~A~~~g~~~ 293 (370)
T 1chr_A 216 VELIEQPVGRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLK-LC-NMGGVSATQKIAAVAEASGIAS 293 (370)
T ss_dssp EEEEECCSCTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEEC-TT-TSCSHHHHHHHHHHHHHHTCEE
T ss_pred CCEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEEC-cc-ccCCHHHHHHHHHHHHHcCCeE
Confidence 33455554433333333333444444432211 256777777653 34444443 33 3677788999999999999988
Q ss_pred EEeCc
Q 021783 94 LVDNS 98 (307)
Q Consensus 94 i~D~a 98 (307)
..=..
T Consensus 294 ~~~~~ 298 (370)
T 1chr_A 294 YGGTM 298 (370)
T ss_dssp EECCS
T ss_pred EecCC
Confidence 76543
No 361
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=30.03 E-value=1.3e+02 Score=24.09 Aligned_cols=80 Identities=8% Similarity=0.043 Sum_probs=30.3
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-C-ChHHHHhhcCCCceEEEEeCCCCCccccc----cHHHHHHHHHH
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-C-DLDEVASAIGPWTKLVWVESPTNPRQQIC----DIRKIAEMAHA 88 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~-d~~~l~~~l~~~~~~v~~~~~~n~tG~~~----~~~~l~~~~~~ 88 (307)
|-|++++..+.. ...+...++..|..++.+-. . +.+.+++........+++.+....||... ++.++.+-+++
T Consensus 127 dGvIipDlp~ee-~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~ 205 (271)
T 3nav_A 127 DSVLIADVPTNE-SQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQ 205 (271)
T ss_dssp CEEEETTSCGGG-CHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHH
T ss_pred CEEEECCCCHHH-HHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHH
Confidence 455555554432 22334455556655443222 1 23333333322223344433333345432 24444444444
Q ss_pred c-CCEEEE
Q 021783 89 H-GALLLV 95 (307)
Q Consensus 89 ~-~~~li~ 95 (307)
+ ++++++
T Consensus 206 ~~~~Pv~v 213 (271)
T 3nav_A 206 FDAPPALL 213 (271)
T ss_dssp TTCCCEEE
T ss_pred hcCCCEEE
Confidence 4 444444
No 362
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=29.97 E-value=1.4e+02 Score=24.95 Aligned_cols=45 Identities=20% Similarity=0.293 Sum_probs=25.7
Q ss_pred ChHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 49 DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 49 d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
+++++++.+.. ...++.+. + +..|-+....+++++|+++|+.+++
T Consensus 244 ~~~~~~~~i~~~~~d~v~ik-~-~~~GGit~~~~i~~~A~~~g~~~~~ 289 (368)
T 1sjd_A 244 SARAAADAIKLGAVQIVNIK-P-GRVGGYLEARRVHDVCAAHGIPVWC 289 (368)
T ss_dssp SHHHHHHHHHTTCCSEEEEC-T-TTTTSHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHcCCCCEEEec-c-cccCCHHHHHHHHHHHHHcCCcEEe
Confidence 45555555532 23344432 2 3356666777788888888877544
No 363
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=29.80 E-value=70 Score=24.59 Aligned_cols=9 Identities=11% Similarity=0.401 Sum_probs=4.6
Q ss_pred EEEEeCccC
Q 021783 92 LLLVDNSIM 100 (307)
Q Consensus 92 ~li~D~a~~ 100 (307)
.|++||+|.
T Consensus 104 vViIDEaQF 112 (214)
T 2j9r_A 104 VIAIDEVQF 112 (214)
T ss_dssp EEEECCGGG
T ss_pred EEEEECccc
Confidence 455555554
No 364
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=29.78 E-value=53 Score=25.96 Aligned_cols=63 Identities=6% Similarity=-0.016 Sum_probs=39.1
Q ss_pred HHHHhhhcccCCcEEEEecCC-ChH----HHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 28 DRLLSRVTPKTGVVVKRVNTC-DLD----EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 28 ~~~~~~~~~~~g~~~~~v~~~-d~~----~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
...+...++..|.++...+.. +.+ .++..+..+...|++..... . ...+..+.+.+.++++|.
T Consensus 27 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~-~----~~~~~~~~~~~~~iPvV~ 94 (293)
T 3l6u_A 27 INAFKAEAKANKYEALVATSQNSRISEREQILEFVHLKVDAIFITTLDD-V----YIGSAIEEAKKAGIPVFA 94 (293)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCT-T----TTHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCh-H----HHHHHHHHHHHcCCCEEE
Confidence 344667788889999888764 443 34444456777777754322 1 233455667777887764
No 365
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=29.33 E-value=46 Score=27.00 Aligned_cols=66 Identities=15% Similarity=0.201 Sum_probs=39.4
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEEecC------CChHHH---HhhcC-CCceEEEEeCCCCCccccccHHHHHH
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------CDLDEV---ASAIG-PWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~------~d~~~l---~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
..+++..+.| .++ ++.+|.+...+.. ..+.++ .+.++ .+.++|+++...++ +-+..
T Consensus 184 ~~~v~~H~af-~Yf------~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ 249 (294)
T 3hh8_A 184 KLIVTSEGCF-KYF------SKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVIKPSALFVESSVDR-------RPMET 249 (294)
T ss_dssp CCEEEEESCC-HHH------HHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHSCCSCEEEETTSCS-------HHHHH
T ss_pred cEEEEECChH-HHH------HHHcCCceeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCc-------HHHHH
Confidence 6677777766 343 6777887665532 134444 44443 57777887654433 23456
Q ss_pred HHHHcCCEEE
Q 021783 85 MAHAHGALLL 94 (307)
Q Consensus 85 ~~~~~~~~li 94 (307)
++++.|+.++
T Consensus 250 ia~~~g~~v~ 259 (294)
T 3hh8_A 250 VSKDSGIPIY 259 (294)
T ss_dssp HHHHHCCCEE
T ss_pred HHHHhCCcEE
Confidence 6788887765
No 366
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=29.25 E-value=30 Score=24.76 Aligned_cols=22 Identities=14% Similarity=0.377 Sum_probs=19.2
Q ss_pred cHHHHHHHHHHcCCEEEEeCcc
Q 021783 78 DIRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~ 99 (307)
--.+|.++|+++|++++.|-.-
T Consensus 81 ~A~~I~e~A~e~gVPi~e~~~L 102 (144)
T 2jlj_A 81 QVQTVRKIAEEEGVPILQRIPL 102 (144)
T ss_dssp HHHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHHcCCCEEeCHHH
Confidence 3778999999999999999753
No 367
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=28.94 E-value=52 Score=26.58 Aligned_cols=65 Identities=9% Similarity=0.142 Sum_probs=41.0
Q ss_pred chHHHHhhhcccCCcEEEEecCC-ChH----HHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 26 GTDRLLSRVTPKTGVVVKRVNTC-DLD----EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 26 ~~~~~~~~~~~~~g~~~~~v~~~-d~~----~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
.....+...++..|.++...... |.+ .++..+..+..+|++.... + .......+.+++.|+++|.
T Consensus 20 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~-~----~~~~~~~~~~~~~giPvV~ 89 (330)
T 3uug_A 20 DDGNNIVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASID-G----TTLSDVLKQAGEQGIKVIA 89 (330)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSS-G----GGGHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCC-c----hhHHHHHHHHHHCCCCEEE
Confidence 33445667788899998877654 443 3444445677788775432 1 1244556677888998874
No 368
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=28.77 E-value=48 Score=26.68 Aligned_cols=26 Identities=12% Similarity=0.138 Sum_probs=17.4
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEe
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 45 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v 45 (307)
++..+++..+.| .++ ++.+|.+...+
T Consensus 176 ~~~~~v~~H~af-~Yf------~~~yGl~~~~~ 201 (284)
T 3cx3_A 176 TQKTFVTQHTAF-SYL------AKRFGLNQLGI 201 (284)
T ss_dssp SCCCEEEEESCC-HHH------HHHTTCCEEEE
T ss_pred CCCEEEEECCch-HHH------HHHcCCEEeec
Confidence 466788877776 344 67788776543
No 369
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=28.45 E-value=57 Score=25.96 Aligned_cols=64 Identities=11% Similarity=0.119 Sum_probs=40.5
Q ss_pred hHHHHhhhcccCCcEEEEecCC---ChHH----HHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 27 TDRLLSRVTPKTGVVVKRVNTC---DLDE----VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 27 ~~~~~~~~~~~~g~~~~~v~~~---d~~~----l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
....+...++..|.++...... |.+. ++..+..+..+|++..... . ......+.+++.|+++|.
T Consensus 21 ~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~-~----~~~~~~~~~~~~giPvV~ 91 (297)
T 3rot_A 21 LFQGAKKAAEELKVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSD-T----AFSKSLQRANKLNIPVIA 91 (297)
T ss_dssp HHHHHHHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCS-S----TTHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCH-H----HHHHHHHHHHHCCCCEEE
Confidence 3444667788899999888754 5543 4444456778888754322 2 224456667777987774
No 370
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=28.33 E-value=1.2e+02 Score=22.82 Aligned_cols=81 Identities=17% Similarity=0.037 Sum_probs=34.3
Q ss_pred CeEEEcCCCCcchHHHHhhhcccCCcEEEE--ecCCCh-HHHHhhcCCCceEEEEeCCCCCcccc---ccHHHHHHHHHH
Q 021783 15 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKR--VNTCDL-DEVASAIGPWTKLVWVESPTNPRQQI---CDIRKIAEMAHA 88 (307)
Q Consensus 15 d~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~--v~~~d~-~~l~~~l~~~~~~v~~~~~~n~tG~~---~~~~~l~~~~~~ 88 (307)
|-|++...........+...++..|.++.. ....++ +.+++........|.+. +. .+|.. ..++.+.++.+.
T Consensus 79 d~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~-~g-~~g~~~~~~~~~~i~~l~~~ 156 (211)
T 3f4w_A 79 DYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVH-TG-TDQQAAGRKPIDDLITMLKV 156 (211)
T ss_dssp SEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEE-CC-HHHHHTTCCSHHHHHHHHHH
T ss_pred CEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEc-CC-CcccccCCCCHHHHHHHHHH
Confidence 556654433212222233445556665542 112233 33444433233444443 21 12222 135555555555
Q ss_pred c-CCEEEEeC
Q 021783 89 H-GALLLVDN 97 (307)
Q Consensus 89 ~-~~~li~D~ 97 (307)
. +++++++.
T Consensus 157 ~~~~~i~~~g 166 (211)
T 3f4w_A 157 RRKARIAVAG 166 (211)
T ss_dssp CSSCEEEEES
T ss_pred cCCCcEEEEC
Confidence 3 66676655
No 371
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=28.26 E-value=2e+02 Score=22.44 Aligned_cols=55 Identities=16% Similarity=0.226 Sum_probs=36.5
Q ss_pred ccCCcEEEEecCCChHHHHhhcCCCceEEEEe-CCCCCc-cccccHHHHHHHHHHcCC
Q 021783 36 PKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE-SPTNPR-QQICDIRKIAEMAHAHGA 91 (307)
Q Consensus 36 ~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~-~~~n~t-G~~~~~~~l~~~~~~~~~ 91 (307)
...+++++..|..|.+.+++++.. ...|+.+ .+.++. ........+.+.|++.++
T Consensus 42 ~~~~v~~~~~D~~d~~~l~~~~~~-~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 42 WRGKVSVRQLDYFNQESMVEAFKG-MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp GBTTBEEEECCTTCHHHHHHHTTT-CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTC
T ss_pred hhCCCEEEEcCCCCHHHHHHHHhC-CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCC
Confidence 346889888898899999999874 3445443 222221 112236788999999885
No 372
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=28.23 E-value=75 Score=24.55 Aligned_cols=9 Identities=11% Similarity=0.283 Sum_probs=4.5
Q ss_pred EEEEeCccC
Q 021783 92 LLLVDNSIM 100 (307)
Q Consensus 92 ~li~D~a~~ 100 (307)
.|++||+|-
T Consensus 104 vV~IDEaQF 112 (219)
T 3e2i_A 104 VIGIDEVQF 112 (219)
T ss_dssp EEEECCGGG
T ss_pred EEEEechhc
Confidence 444555554
No 373
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=28.22 E-value=1e+02 Score=21.17 Aligned_cols=72 Identities=14% Similarity=-0.007 Sum_probs=36.3
Q ss_pred HhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHH
Q 021783 9 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA 88 (307)
Q Consensus 9 ~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~ 88 (307)
.+.+.|-+|++-+..- ... ..+...|..+...+..+.+.+++.--.+..+++++.+ + ...-..+...+++
T Consensus 24 ~L~~~g~~V~~id~~~-~~~----~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~-~----~~~n~~~~~~a~~ 93 (141)
T 3llv_A 24 ELTAAGKKVLAVDKSK-EKI----ELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS-D----DEFNLKILKALRS 93 (141)
T ss_dssp HHHHTTCCEEEEESCH-HHH----HHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS-C----HHHHHHHHHHHHH
T ss_pred HHHHCCCeEEEEECCH-HHH----HHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC-C----HHHHHHHHHHHHH
Confidence 3445566665544322 111 1223346777666766777777653345566665443 1 1112334555666
Q ss_pred cC
Q 021783 89 HG 90 (307)
Q Consensus 89 ~~ 90 (307)
.+
T Consensus 94 ~~ 95 (141)
T 3llv_A 94 VS 95 (141)
T ss_dssp HC
T ss_pred hC
Confidence 54
No 374
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=28.08 E-value=1.6e+02 Score=23.50 Aligned_cols=87 Identities=14% Similarity=0.121 Sum_probs=52.4
Q ss_pred HHHHhcCCCCeE-EEcCCCCcch---HHHHhhhcccCCcEEEEecCCChHHHHhhc---CCCceEEEEeCCCCCcccccc
Q 021783 6 AVTHLLGTGEEI-VAGDDLYGGT---DRLLSRVTPKTGVVVKRVNTCDLDEVASAI---GPWTKLVWVESPTNPRQQICD 78 (307)
Q Consensus 6 ~~~~~~~~gd~V-lv~~~~~~~~---~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l---~~~~~~v~~~~~~n~tG~~~~ 78 (307)
++..++....+| ++.++..... ...++..++..|.+++.....+.+++.+.+ .+++.++++..-+ ...-.
T Consensus 132 l~~~l~P~~k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~l~~~~d~i~~~~d~---~~~~~ 208 (302)
T 3lkv_A 132 LIKEILPNVKSIGVVYNPGEANAVSLMELLKLSAAKHGIKLVEATALKSADVQSATQAIAEKSDVIYALIDN---TVASA 208 (302)
T ss_dssp HHHHHSTTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEEEEECSSGGGHHHHHHHHHTTCSEEEECSCH---HHHHT
T ss_pred HHHHhCCCCCEEEEEeCCCcccHHHHHHHHHHHHHHcCCEEEEEecCChHHHHHHHHhccCCeeEEEEeCCc---chhhH
Confidence 344455444555 4555554332 233556778889999888876555555444 3677777764211 12224
Q ss_pred HHHHHHHHHHcCCEEEE
Q 021783 79 IRKIAEMAHAHGALLLV 95 (307)
Q Consensus 79 ~~~l~~~~~~~~~~li~ 95 (307)
.+.+..++.+.+++++.
T Consensus 209 ~~~i~~~~~~~~iPv~~ 225 (302)
T 3lkv_A 209 IEGMIVAANQAKTPVFG 225 (302)
T ss_dssp HHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhhcCCceee
Confidence 77888888888887763
No 375
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=27.87 E-value=49 Score=24.81 Aligned_cols=62 Identities=10% Similarity=0.059 Sum_probs=37.6
Q ss_pred CcchHHHHhhhccc---CCcEEEEec--CCChHHHHhhcC---C--CceEEEEeCCCCCccccccHHHHHHH
Q 021783 24 YGGTDRLLSRVTPK---TGVVVKRVN--TCDLDEVASAIG---P--WTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 24 ~~~~~~~~~~~~~~---~g~~~~~v~--~~d~~~l~~~l~---~--~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
+.++...+...++. .|+++.... .||.+.+.+++. . +..+|+++.-..++-.-+-.+.+.++
T Consensus 32 ~D~n~~~L~~~L~~~~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVIttGGtg~g~~D~t~eal~~~ 103 (189)
T 1jlj_A 32 EDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEV 103 (189)
T ss_dssp CCHHHHHHHHHHHCTTTTCCEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHHHH
T ss_pred cchHHHHHHHHHhchhcCCcEEEEEEEeCCCHHHHHHHHHHHhhcCCCCEEEEcCCCCCCCcccHHHHHHHH
Confidence 44444456666666 788876544 368887777765 2 56788887666654333334444443
No 376
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=27.57 E-value=1.2e+02 Score=24.69 Aligned_cols=56 Identities=11% Similarity=0.089 Sum_probs=38.8
Q ss_pred ccCCcEEEEecCCChHHHHhhcC-CCceEEEEe-CCCCCccccccHHHHHHHHHHcC-CEEEE
Q 021783 36 PKTGVVVKRVNTCDLDEVASAIG-PWTKLVWVE-SPTNPRQQICDIRKIAEMAHAHG-ALLLV 95 (307)
Q Consensus 36 ~~~g~~~~~v~~~d~~~l~~~l~-~~~~~v~~~-~~~n~tG~~~~~~~l~~~~~~~~-~~li~ 95 (307)
...|++++..+..|.+++.+++. .+...|+-+ ... .+.....+.+.|++.+ +..++
T Consensus 58 ~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~----n~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 58 EDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGE----SILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp HHTTCEEEECCTTCHHHHHHHHHHTTCCEEEECCCGG----GGGGHHHHHHHHHHHCCCSEEE
T ss_pred HhCCcEEEEeecCCHHHHHHHHhhCCCCEEEECCchh----hHHHHHHHHHHHHHcCCceEEe
Confidence 34689999999999999999887 244555543 222 3334578999999988 65544
No 377
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=27.45 E-value=1.3e+02 Score=22.33 Aligned_cols=36 Identities=14% Similarity=0.188 Sum_probs=26.0
Q ss_pred hhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 021783 55 SAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 94 (307)
Q Consensus 55 ~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li 94 (307)
..++++.-+|+++. +|...++-+.++.|++.|+.+|
T Consensus 109 ~~~~~~DvvI~iS~----SG~t~~~i~~~~~ak~~g~~vI 144 (199)
T 1x92_A 109 ALGQPGDVLLAIST----SGNSANVIQAIQAAHDREMLVV 144 (199)
T ss_dssp HHCCTTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEE
T ss_pred hCCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEE
Confidence 44666665666542 4777788899999999997665
No 378
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=27.45 E-value=1.3e+02 Score=22.60 Aligned_cols=39 Identities=18% Similarity=0.065 Sum_probs=27.6
Q ss_pred HHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 53 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 53 l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
+...++++..+|.++ .+|...++-+.++.+++.|+.+|.
T Consensus 108 l~~~~~~~Dvvi~iS----~SG~t~~~~~~~~~ak~~g~~vi~ 146 (201)
T 3trj_A 108 VAALGNEDDILLVIT----TSGDSENILSAVEEAHDLEMKVIA 146 (201)
T ss_dssp HHHHCCTTCEEEEEC----SSSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHhhCCCCCEEEEEe----CCCCCHHHHHHHHHHHHCCCcEEE
Confidence 334456666566653 257778889999999999987764
No 379
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=27.11 E-value=1.5e+02 Score=24.02 Aligned_cols=64 Identities=11% Similarity=-0.019 Sum_probs=39.1
Q ss_pred CcchHHHHhhhcccCCcEEEEecCC-ChHH----HHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 021783 24 YGGTDRLLSRVTPKTGVVVKRVNTC-DLDE----VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 94 (307)
Q Consensus 24 ~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~----l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li 94 (307)
|......+...++..|..+...... +.+. ++..+..+...+++...... .+..+.+++.++++|
T Consensus 83 ~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdGiIi~~~~~~-------~~~~~~l~~~~iPvV 151 (344)
T 3kjx_A 83 FPEVLTGINQVLEDTELQPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAGLEHS-------EAARAMLDAAGIPVV 151 (344)
T ss_dssp HHHHHHHHHHHHTSSSSEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCC-------HHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEECCCCC-------HHHHHHHHhCCCCEE
Confidence 3334455667888899998877654 4433 34444567777777543221 145556677787666
No 380
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=26.78 E-value=1.3e+02 Score=22.11 Aligned_cols=37 Identities=19% Similarity=0.096 Sum_probs=26.6
Q ss_pred HhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 021783 54 ASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 94 (307)
Q Consensus 54 ~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li 94 (307)
...++++.-+|+++ .+|...++-+.++.+++.|+.+|
T Consensus 104 ~~~~~~~DvvI~iS----~SG~t~~~i~~~~~ak~~g~~vI 140 (196)
T 2yva_A 104 RALGHAGDVLLAIS----TRGNSRDIVKAVEAAVTRDMTIV 140 (196)
T ss_dssp HHHCCTTCEEEEEC----SSSCCHHHHHHHHHHHHTTCEEE
T ss_pred HhcCCCCCEEEEEe----CCCCCHHHHHHHHHHHHCCCEEE
Confidence 34556666566653 25777888899999999997665
No 381
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=26.77 E-value=58 Score=28.28 Aligned_cols=84 Identities=14% Similarity=0.067 Sum_probs=55.7
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCC--cEEEEecC--CChHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT--CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~--~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
++.+=+-+.+.+|-...-+..|..+.+..| +.++-=+. .+++.+.+.+.. ....+.+- + |-.|.+-+.-++.+
T Consensus 293 lle~ypIv~IEDPl~~dD~eg~a~Lt~~lg~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIK-v-nQIGgITEalka~~ 370 (452)
T 3otr_A 293 WLKKYPIISVEDPFDQDDFASFSAFTKDVGEKTQVIGDDILVTNILRIEKALKDKACNCLLLK-V-NQIGSVTEAIEACL 370 (452)
T ss_dssp HHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC-H-HHHCCHHHHHHHHH
T ss_pred HHhhhCceEEecCCChhhHHHHHHHHHhhCCCeEEEeCccccCCHHHHHHHHhcCCCCEEEee-c-cccccHHHHHHHHH
Confidence 444334667888877777777777777666 66654332 367788777763 33344432 2 34677888889999
Q ss_pred HHHHcCCEEEE
Q 021783 85 MAHAHGALLLV 95 (307)
Q Consensus 85 ~~~~~~~~li~ 95 (307)
+|+++|..+++
T Consensus 371 lA~~~G~~vmv 381 (452)
T 3otr_A 371 LAQKSGWGVQV 381 (452)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHcCCeEEE
Confidence 99999988776
No 382
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=26.73 E-value=52 Score=30.35 Aligned_cols=27 Identities=19% Similarity=0.309 Sum_probs=23.2
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCcc
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~ 99 (307)
.|...+++++++-||++|+.||.|-+.
T Consensus 103 ~Gt~~d~~~lv~~~h~~gi~vi~D~V~ 129 (669)
T 3k8k_A 103 LGTESDFDRLVTEAHNRGIKIYLDYVM 129 (669)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEECc
Confidence 355557999999999999999999985
No 383
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=26.65 E-value=1.4e+02 Score=25.09 Aligned_cols=73 Identities=14% Similarity=0.105 Sum_probs=37.3
Q ss_pred EEcCCCCcchHHHHhhhcccC-CcEEEEecCCChHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 18 VAGDDLYGGTDRLLSRVTPKT-GVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 18 lv~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
.+..|..+.....+..+.+.. ++++..-...+++++++.+. ....+|.+. |-+....+++++|+++|+.++.
T Consensus 222 ~iEqP~~~~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik------GGit~a~~i~~~A~~~gi~~~~ 295 (389)
T 2oz8_A 222 WVEDPILRHDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAADILNVH------GQVTDVMRIGWLAAELGIPISI 295 (389)
T ss_dssp EEESCBCTTCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCSEEEEC------SCHHHHHHHHHHHHHHTCCEEE
T ss_pred EEeCCCCCcCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCCEEEEC------cCHHHHHHHHHHHHHcCCeEee
Confidence 344443322333333333334 44443322224555555554 234455543 6666777788888888776665
Q ss_pred e
Q 021783 96 D 96 (307)
Q Consensus 96 D 96 (307)
=
T Consensus 296 ~ 296 (389)
T 2oz8_A 296 G 296 (389)
T ss_dssp C
T ss_pred c
Confidence 4
No 384
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=26.30 E-value=35 Score=32.01 Aligned_cols=27 Identities=22% Similarity=0.271 Sum_probs=23.4
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
|...+++++++.||++|+-||.|-++.
T Consensus 248 Gt~~df~~lv~~~H~~Gi~VilD~V~N 274 (755)
T 3aml_A 248 GTPEDLKYLVDKAHSLGLRVLMDVVHS 274 (755)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 444569999999999999999999975
No 385
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=26.27 E-value=1.1e+02 Score=25.38 Aligned_cols=37 Identities=11% Similarity=0.138 Sum_probs=22.7
Q ss_pred CCceEEEEeCCCCCcc---------cc----------ccHHHHHHHHHHcCCEEEE
Q 021783 59 PWTKLVWVESPTNPRQ---------QI----------CDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG---------~~----------~~~~~l~~~~~~~~~~li~ 95 (307)
.++++|+++++..... .. .-+.++..+++++|+.+|.
T Consensus 138 ~~~~lIVIDsl~~l~~~~e~~~~~gd~~~~~q~r~~~~~l~~L~~~a~~~~~tVI~ 193 (349)
T 2zr9_A 138 GALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIF 193 (349)
T ss_dssp TCCSEEEEECGGGCCCHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCEEEEcChHhhcchhhhccccccchhhHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 4578999988766441 11 0145566667888876654
No 386
>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} SCOP: c.23.13.1 PDB: 1h0r_A* 1h0s_A* 2dhq_A 2xb8_A* 2y71_A* 2y76_A* 2y77_A* 3n76_A* 3n7a_A* 3n86_A* 3n87_A* 3n8n_A*
Probab=26.12 E-value=65 Score=23.02 Aligned_cols=64 Identities=13% Similarity=0.041 Sum_probs=33.5
Q ss_pred hHHHHhhhcccCCcEEEEecCCChHHHHhhcC---CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 021783 27 TDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 94 (307)
Q Consensus 27 ~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li 94 (307)
....+...+...|.++.....+.-.+|...+. .+...|++ ||-+.+..=-.|.+.....++++|
T Consensus 32 i~~~l~~~a~~~g~~~~~~QSN~EgeLId~Ih~a~~~~dgiiI----NpgA~THtSvAlrDAl~~v~~P~V 98 (146)
T 1h05_A 32 LVALIEREAAELGLKAVVRQSDSEAQLLDWIHQAADAAEPVIL----NAGGLTHTSVALRDACAELSAPLI 98 (146)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHHHHHTCCEEE----ECGGGGGTCHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHHcCCEEEEEeeCCHHHHHHHHHHhhhcCcEEEE----CchhhccccHHHHHHHHhCCCCEE
Confidence 34445556666777777777665544444443 12334444 444444433345555555565555
No 387
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=26.02 E-value=35 Score=31.20 Aligned_cols=28 Identities=11% Similarity=0.199 Sum_probs=24.6
Q ss_pred ccccccHHHHHHHHHHcC--C--EEEEeCccC
Q 021783 73 RQQICDIRKIAEMAHAHG--A--LLLVDNSIM 100 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~--~--~li~D~a~~ 100 (307)
.|...+++++++.||++| + .||.|-++.
T Consensus 235 ~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~N 266 (637)
T 1ji1_A 235 FGDNSTLQTLINDIHSTANGPKGYLILDGVFN 266 (637)
T ss_dssp TCCHHHHHHHHHHHHCSSSSSCCEEEEEECCS
T ss_pred cCCHHHHHHHHHHHHhCCCCccceEEEEECcc
Confidence 466667999999999999 9 999999974
No 388
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=25.76 E-value=2.5e+02 Score=22.35 Aligned_cols=78 Identities=13% Similarity=0.104 Sum_probs=46.5
Q ss_pred EEEcCCCCcchHHHHhhhcccCCcEEEEecC-CChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 17 IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 17 Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
|+....-|.+....+....+..+.++..=+. .|+.++.++..-....|++....- ...+++++.+.|++.|..+++
T Consensus 98 Vltd~~~f~Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L---~~~~l~~l~~~a~~lGl~~lv 174 (272)
T 3tsm_A 98 VLTDTPSFQGAPEFLTAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIMASV---DDDLAKELEDTAFALGMDALI 174 (272)
T ss_dssp EECCSTTTCCCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTS---CHHHHHHHHHHHHHTTCEEEE
T ss_pred EeccccccCCCHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEccccc---CHHHHHHHHHHHHHcCCeEEE
Confidence 3443333335555555555556666543232 477778777665555665543211 113588999999999998888
Q ss_pred eC
Q 021783 96 DN 97 (307)
Q Consensus 96 D~ 97 (307)
+.
T Consensus 175 ev 176 (272)
T 3tsm_A 175 EV 176 (272)
T ss_dssp EE
T ss_pred Ee
Confidence 76
No 389
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=25.55 E-value=36 Score=22.40 Aligned_cols=20 Identities=5% Similarity=-0.001 Sum_probs=14.2
Q ss_pred HHhcCCCCeEEEcCCCCcch
Q 021783 8 THLLGTGEEIVAGDDLYGGT 27 (307)
Q Consensus 8 ~~~~~~gd~Vlv~~~~~~~~ 27 (307)
-.++++||.|++-.+.+..-
T Consensus 50 Arl~~~GD~vII~aY~~~~~ 69 (97)
T 1uhe_A 50 ARKVAIGDVVIILAYASMNE 69 (97)
T ss_dssp GGGCCTTCEEEEEEEEEECH
T ss_pred HccCCCCCEEEEEECccCCH
Confidence 34778999998877665443
No 390
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=25.49 E-value=1.2e+02 Score=23.22 Aligned_cols=82 Identities=6% Similarity=0.020 Sum_probs=53.7
Q ss_pred CeEEEcCC---CCcchHHHHhhhcccCCcEEEEecCC-ChHHHHhhcC-CCceEEEE--eCCCCCccccccHHHHHHHHH
Q 021783 15 EEIVAGDD---LYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWV--ESPTNPRQQICDIRKIAEMAH 87 (307)
Q Consensus 15 d~Vlv~~~---~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l~-~~~~~v~~--~~~~n~tG~~~~~~~l~~~~~ 87 (307)
.+|++-.+ .|.--.+.....++..|.+++..-.+ .++++.+++. .++.+|.+ +... +.....++++.+..+
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~--~~~~~~~~~~i~~l~ 170 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALM--TTSMLGQKDLMDRLN 170 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSS--HHHHTHHHHHHHHHH
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcc--cCcHHHHHHHHHHHH
Confidence 45654332 45434455667889999999987664 6778765554 67777887 5433 334556888888888
Q ss_pred HcC----CEEEEeCc
Q 021783 88 AHG----ALLLVDNS 98 (307)
Q Consensus 88 ~~~----~~li~D~a 98 (307)
+.+ +.+++=++
T Consensus 171 ~~~~~~~v~v~vGG~ 185 (215)
T 3ezx_A 171 EEKLRDSVKCMFGGA 185 (215)
T ss_dssp HTTCGGGSEEEEESS
T ss_pred HcCCCCCCEEEEECC
Confidence 875 56666443
No 391
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=25.44 E-value=1.2e+02 Score=21.88 Aligned_cols=63 Identities=10% Similarity=0.074 Sum_probs=39.2
Q ss_pred HHHhhhcccCCcEEEEecCCChHHHHhhcC---CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 29 RLLSRVTPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 29 ~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
..+...+...|+++.....+...+|...|. .+...|++ ||-+.+..--.|.+.....++++|+
T Consensus 39 ~~l~~~a~~~g~~~~~~QSN~EgeLId~Ih~a~~~~dgiiI----NpgA~THtSvAlrDAl~~~~~P~VE 104 (153)
T 3lwz_A 39 SQLEIQAQGMDVALSHLQSNAEHALIDSIHQARGNTDFILI----NPAAFTHTSVALRDALLGVQIPFIE 104 (153)
T ss_dssp HHHHHHHHHTTEEEEEEECSCHHHHHHHHHHHTTTCSEEEE----ECGGGGGTCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCEEEEEecCCHHHHHHHHHHhhhcCceEEE----ccccceechHHHHHHHHhcCCCEEE
Confidence 445566777899999888886655555543 45666766 4555554333455555566777663
No 392
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=25.36 E-value=2.2e+02 Score=22.23 Aligned_cols=65 Identities=8% Similarity=-0.167 Sum_probs=38.4
Q ss_pred CcchHHHHhhhcccCCcEEEEecCC-C----hHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 24 YGGTDRLLSRVTPKTGVVVKRVNTC-D----LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 24 ~~~~~~~~~~~~~~~g~~~~~v~~~-d----~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
|......+...++..|.++...... | .+.++..+..+...+++...... + +..+.+.+.++++|.
T Consensus 23 ~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~-----~--~~~~~l~~~~iPvV~ 92 (287)
T 3bbl_A 23 LDQFLSSMVREAGAVNYFVLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSSINYN-----D--PRVQFLLKQKFPFVA 92 (287)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCCCSSTTCCHHHHHHHHTTCCSEEEECSCCTT-----C--HHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeCCCchHHHHHHHHHHHcCCCCEEEEeecCCC-----c--HHHHHHHhcCCCEEE
Confidence 3344455667788899998876643 2 23455555667788877543321 1 234445567877653
No 393
>3b0z_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.45A {Salmonella enterica subsp}
Probab=30.99 E-value=15 Score=25.13 Aligned_cols=24 Identities=17% Similarity=0.120 Sum_probs=20.0
Q ss_pred ccHHHHHHHHHHcCCEEEEeCccC
Q 021783 77 CDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 77 ~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.--.+|.++|+++|++++.|-.-+
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~LA 50 (114)
T 3b0z_B 27 LIALRIREIGAEHRVPTLEAPPLA 50 (114)
Confidence 346789999999999999998644
No 394
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=24.95 E-value=78 Score=30.00 Aligned_cols=75 Identities=11% Similarity=0.212 Sum_probs=47.1
Q ss_pred CCCCcchHHHHhhhcccCCcEEEEecCC-ChHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCc
Q 021783 21 DDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 98 (307)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a 98 (307)
-|.|.+....... ....++-++.+|.. -++.+++.++ ...+.+++-+..-|. .+..++.++|+++|+.++==++
T Consensus 550 vp~y~sv~ea~~~-~p~~DlaVI~vP~~~v~~av~ea~~~~Gvk~~Viis~Gf~e---~~~~~l~~~A~~~g~rliGPNc 625 (829)
T 3pff_A 550 IPVFKNMADAMRK-HPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPE---ALTRKLIKKADQKGVTIIGPAT 625 (829)
T ss_dssp EEEESSHHHHHHH-CTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCH---HHHHHHHHHHHHHTCEEECSSC
T ss_pred cccCCcHHHHhhc-cCCCcEEEEeCCHHHHHHHHHHHHhhCCCCEEEEeCCCCCH---HHHHHHHHHHHHcCCEEEcCCC
Confidence 3667666622111 01246677777765 3567888888 778877664332221 3678999999999998875444
Q ss_pred c
Q 021783 99 I 99 (307)
Q Consensus 99 ~ 99 (307)
.
T Consensus 626 ~ 626 (829)
T 3pff_A 626 V 626 (829)
T ss_dssp C
T ss_pred c
Confidence 3
No 395
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=24.87 E-value=62 Score=27.83 Aligned_cols=86 Identities=15% Similarity=0.113 Sum_probs=57.4
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCC--cEEEEecC-C-ChHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT-C-DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~-~-d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
++.+=+-+.+.+|-....+..|..+.+..| +++..=+. . +++++.+.+.. ...++.+. + |-.|.+-+..++++
T Consensus 273 ll~~y~i~~IEdPl~~dD~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iK-v-~qiGGiTea~kia~ 350 (417)
T 3qn3_A 273 LCAKYPICSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIK-P-NQIGTITQTMRTVR 350 (417)
T ss_dssp HHHHSCEEEEESSSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC-H-HHHCSHHHHHHHHH
T ss_pred HHhhcceeEEecCCCcccHHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCCEEEec-C-CCCCCHHHHHHHHH
Confidence 455555777888877766766777766664 55543222 1 47888888763 33444433 2 34688888999999
Q ss_pred HHHHcCCEEEEeC
Q 021783 85 MAHAHGALLLVDN 97 (307)
Q Consensus 85 ~~~~~~~~li~D~ 97 (307)
+|+++|+.+++=.
T Consensus 351 lA~~~G~~v~vsh 363 (417)
T 3qn3_A 351 LAQRNNYKCVMSH 363 (417)
T ss_dssp HHHHTTCEEEEEC
T ss_pred HHHHcCCeEEEeC
Confidence 9999999887633
No 396
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=24.66 E-value=1.7e+02 Score=22.84 Aligned_cols=65 Identities=5% Similarity=-0.094 Sum_probs=38.6
Q ss_pred CcchHHHHhhhcccCCcEEEEecCCC----hHHHHhhc-CCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 24 YGGTDRLLSRVTPKTGVVVKRVNTCD----LDEVASAI-GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 24 ~~~~~~~~~~~~~~~g~~~~~v~~~d----~~~l~~~l-~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
|......+...++..|..+......+ ...+.+.+ ..+...+++...... .+..+.+++.++++|.
T Consensus 25 ~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~-------~~~~~~l~~~~iPvV~ 94 (288)
T 3gv0_A 25 TSQMVFGITEVLSTTQYHLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEPN-------DPRVRFMTERNMPFVT 94 (288)
T ss_dssp HHHHHHHHHHHHTTSSCEEEECCBSSGGGTTHHHHHHHHHTCCSEEEEESCCTT-------CHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEecCCcchhHHHHHHHHHHcCCccEEEEecCCCC-------cHHHHHHhhCCCCEEE
Confidence 33344556678888999998876542 23344433 356777777543321 1345556677888774
No 397
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=24.65 E-value=67 Score=17.86 Aligned_cols=25 Identities=24% Similarity=0.236 Sum_probs=16.9
Q ss_pred eEEEEecc---CChHHHHHHHHHHHhcC
Q 021783 281 LVRISVGI---EDVNDLISDLDKALRTG 305 (307)
Q Consensus 281 ~iRis~~~---~~~~~~i~~l~~~l~~~ 305 (307)
.+|||+.. .+.+.+...|.+.+.++
T Consensus 3 rvrisitartkkeaekfaailikvfael 30 (62)
T 2gjh_A 3 RVRISITARTKKEAEKFAAILIKVFAEL 30 (62)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEecchhHHHHHHHHHHHHHHHh
Confidence 48999965 45666666777666554
No 398
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=24.56 E-value=43 Score=30.76 Aligned_cols=26 Identities=15% Similarity=0.280 Sum_probs=23.3
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 75 QICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
...+++++++.||++|+.||.|-++.
T Consensus 240 ~~~d~~~lv~~~H~~Gi~VilD~V~N 265 (657)
T 2wsk_A 240 ALDEFRDAIKALHKAGIEVILDIVLN 265 (657)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 45689999999999999999999974
No 399
>3kip_A 3-dehydroquinase, type II; lyase; 2.95A {Candida albicans}
Probab=24.53 E-value=2.1e+02 Score=20.92 Aligned_cols=64 Identities=8% Similarity=-0.033 Sum_probs=37.2
Q ss_pred HHHHhhhc--ccCCcEEEEecCCChHHHHhhcC----CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 28 DRLLSRVT--PKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 28 ~~~~~~~~--~~~g~~~~~v~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
...+...+ ...|+++.....+.-.+|...|. .+...|++ ||-+.+..--.|.+.....++++|+
T Consensus 45 ~~~l~~~a~~~~~g~~v~~~QSN~EGeLId~Ih~A~~~~~dgIII----NpgAyTHtSvAlrDAL~~v~~P~VE 114 (167)
T 3kip_A 45 EQAAIEQAKLKNNDSEVLVFQSNTEGFIIDRIHEAKRQGVGFVVI----NAGAYTHTSVGIRDALLGTAIPFIE 114 (167)
T ss_dssp HHHHHHHHHHTCSSCEEEEEECSCHHHHHHHHHHHHHTTCCEEEE----ECGGGGGTCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhccccCCcEEEEEecCCHHHHHHHHHHhhhcCccEEEE----ccccceeccHHHHHHHHhcCCCEEE
Confidence 34455666 67788888888875544444432 34556665 4445444333455556666777664
No 400
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=24.51 E-value=40 Score=31.01 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=25.9
Q ss_pred CCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 70 TNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 70 ~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+...|...+++++++-||++|+.||.|-+..
T Consensus 154 ~~~~Gt~~d~~~lv~~~h~~Gi~Vi~D~V~N 184 (655)
T 3ucq_A 154 RPDLGTMDDLSALARALRGRGISLVLDLVLN 184 (655)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEeecc
Confidence 3445666789999999999999999999953
No 401
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=24.40 E-value=90 Score=23.07 Aligned_cols=52 Identities=8% Similarity=0.072 Sum_probs=34.9
Q ss_pred CCcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcC---CC--ceEEEEeCCCCCcc
Q 021783 23 LYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIG---PW--TKLVWVESPTNPRQ 74 (307)
Q Consensus 23 ~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~---~~--~~~v~~~~~~n~tG 74 (307)
.+.++...+...++..|++++.... ||.+++.+++. .+ ..+|+++.-..++-
T Consensus 37 i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 37 IVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred EeehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 3445555567888889998776543 68888777764 23 67888876655543
No 402
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=24.33 E-value=1.1e+02 Score=21.26 Aligned_cols=73 Identities=16% Similarity=0.146 Sum_probs=46.6
Q ss_pred CCcchHHHHhhhcccCCcEEEEecCC-ChHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHHHHHHcC---CEEEEeC
Q 021783 23 LYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHG---ALLLVDN 97 (307)
Q Consensus 23 ~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~---~~li~D~ 97 (307)
.|.--...+...++..|.+++..-.+ .++++.++.. .++.+|.++.... .....++++.+..++.+ +.+++=+
T Consensus 15 ~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~~~~~d~v~lS~~~~--~~~~~~~~~i~~l~~~g~~~i~v~vGG 92 (137)
T 1ccw_A 15 CHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYG--QGEIDCKGLRQKCDEAGLEGILLYVGG 92 (137)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCSEEEEEECSS--THHHHHTTHHHHHHHTTCTTCEEEEEE
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEecCc--CcHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 45444455667788999999876543 6777766664 5677777765443 23345677777777653 5566544
No 403
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=24.31 E-value=64 Score=27.97 Aligned_cols=86 Identities=16% Similarity=0.102 Sum_probs=56.1
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccC--CcEEEEecC--CChHHHHhhcC-CCceEEEEeCCCCCccccccHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNT--CDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~--~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
+..+=+-..+.+|..+.....+..+.+.. .+++..=+. .++.++.+.+. ....++.+. + +-.|-+.+..++++
T Consensus 291 l~~~~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik-~-~~~GGitea~~ia~ 368 (444)
T 1w6t_A 291 LVNKYPIITIEDGMDENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILIK-V-NQIGTLTETFEAIE 368 (444)
T ss_dssp HHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC-H-HHHCSHHHHHHHHH
T ss_pred HHHhCCcEEEECCCChhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEc-c-cccCCHHHHHHHHH
Confidence 33333567788888776666666666665 555544332 26778887775 333444443 2 33677888899999
Q ss_pred HHHHcCCEEEEeC
Q 021783 85 MAHAHGALLLVDN 97 (307)
Q Consensus 85 ~~~~~~~~li~D~ 97 (307)
+|+++|+.++.-.
T Consensus 369 lA~~~g~~v~~~h 381 (444)
T 1w6t_A 369 MAKEAGYTAVVSH 381 (444)
T ss_dssp HHHHTTCEEEEEC
T ss_pred HHHHCCCeEEecC
Confidence 9999999887733
No 404
>2kg4_A Growth arrest and DNA-damage-inducible protein GA alpha; GADD45, flexible regions, monomer cycle; NMR {Homo sapiens}
Probab=24.30 E-value=2.1e+02 Score=20.90 Aligned_cols=58 Identities=14% Similarity=0.186 Sum_probs=37.2
Q ss_pred HHhhhcccCCcEEEEecCCChHHHHhhcC----------------CCceEEEEeCCCCCccccccHHHHHHHHHHc
Q 021783 30 LLSRVTPKTGVVVKRVNTCDLDEVASAIG----------------PWTKLVWVESPTNPRQQICDIRKIAEMAHAH 89 (307)
Q Consensus 30 ~~~~~~~~~g~~~~~v~~~d~~~l~~~l~----------------~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~ 89 (307)
.+..++...++++++++ +-++|-++.. .+...+++..+...+-....++.|.+.|+++
T Consensus 77 li~alC~E~~Ip~i~V~--s~k~LG~a~Gi~~~~~~~~~d~~g~~r~~scv~V~~~g~~s~~~~a~~~l~~~~~e~ 150 (165)
T 2kg4_A 77 LIQAFCCENDINILRVS--NPGRLAELLLLETDAGPAASEGAEQPPDLHCVLVTNPHSSQWKDPALSQLICFCRES 150 (165)
T ss_dssp HHHHHHHHTTCCEEEES--CHHHHHHHHHHTTTCSSCCCCSSCCCSCSCEEEEECCSSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEC--CHHHHHHHHCCcccccccccccCCCcccceEEEEeccccccccchHHHHHHHHHHHh
Confidence 35588999999999988 4555555432 1345666665544332234578888888775
No 405
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=24.27 E-value=99 Score=22.40 Aligned_cols=62 Identities=10% Similarity=-0.050 Sum_probs=39.1
Q ss_pred CCcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcC---C--CceEEEEeCCCCCccccccHHHHHH
Q 021783 23 LYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIG---P--WTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 23 ~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~---~--~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
.+.++...+...++..|+++..... ||.+.+.+++. . +..+|+++.-..++-.-.-.+.+.+
T Consensus 18 i~D~n~~~l~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~t~ea~~~ 86 (164)
T 2is8_A 18 RQDTTHLAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLAPRDRTPEATRE 86 (164)
T ss_dssp SCCCHHHHHHHHHTTSSEEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHHT
T ss_pred cccchHHHHHHHHHHCCCeEeEEEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCCCCChHHHHHH
Confidence 3445555566788889998776543 68888877775 2 5778888766665433333444433
No 406
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=24.21 E-value=2.8e+02 Score=22.30 Aligned_cols=73 Identities=14% Similarity=0.141 Sum_probs=41.1
Q ss_pred EEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHc--CCEEEEeCccCCCCcCCccCCCccEEEecc
Q 021783 42 VKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLSRPLELGADIVMHSA 119 (307)
Q Consensus 42 ~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~d~~~~s~ 119 (307)
.+.+..++++++++++......|.+.+.+ ...++++.+..+.. ++.+..=+--..-........|+|+++.+.
T Consensus 195 ~I~VEV~tleea~eA~~aGaD~I~LDn~~-----~e~l~~av~~l~~~~~~v~ieASGGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 195 KIEVEVENLEDALRAVEAGADIVMLDNLS-----PEEVKDISRRIKDINPNVIVEVSGGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp CEEEEESSHHHHHHHHHTTCSEEEEESCC-----HHHHHHHHHHHHHHCTTSEEEEEECCCTTTGGGGCCTTCCEEEEGG
T ss_pred eEEEEeCCHHHHHHHHHcCCCEEEECCCC-----HHHHHHHHHHhhccCCCceEEEECCCCHHHHHHHHHcCCCEEEEeH
Confidence 44555668999999888777788877621 13455666665542 344432111111122344556888777554
No 407
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=24.18 E-value=1.1e+02 Score=25.22 Aligned_cols=67 Identities=13% Similarity=0.111 Sum_probs=36.2
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC------CChHH---HHhhcC-CCceEEEEeCCCCCccccccHHHHH
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------CDLDE---VASAIG-PWTKLVWVESPTNPRQQICDIRKIA 83 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~------~d~~~---l~~~l~-~~~~~v~~~~~~n~tG~~~~~~~l~ 83 (307)
+..+++..+.| .|+ ++.+|.+...+.. ..+.+ +.+.++ .+.++|+.+.-.++ +-+.
T Consensus 204 ~r~~v~~H~af-~Yf------a~~yGL~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~~ 269 (321)
T 1xvl_A 204 QRFLVSCEGAF-SYL------ARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSD-------KGQK 269 (321)
T ss_dssp GCEEEEEESTT-HHH------HHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEETTSCS-------HHHH
T ss_pred CCEEEEECchH-HHH------HHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCCh-------HHHH
Confidence 56778777666 343 6788988765432 13333 333333 45666666543332 1223
Q ss_pred HHHHHcCCEEE
Q 021783 84 EMAHAHGALLL 94 (307)
Q Consensus 84 ~~~~~~~~~li 94 (307)
.++++.|+.++
T Consensus 270 ~iA~e~g~~v~ 280 (321)
T 1xvl_A 270 QVAQATGARFG 280 (321)
T ss_dssp HHHTTTCCEEE
T ss_pred HHHHhcCCcee
Confidence 44666666654
No 408
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=24.16 E-value=49 Score=27.26 Aligned_cols=20 Identities=20% Similarity=0.425 Sum_probs=18.3
Q ss_pred cHHHHHHHHHHcCCEEEEeC
Q 021783 78 DIRKIAEMAHAHGALLLVDN 97 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~ 97 (307)
.++++++.|.++|+++|+|-
T Consensus 106 ~ld~~v~~a~~~Gi~VilD~ 125 (327)
T 3pzt_A 106 KVKEAVEAAKELGIYVIIDW 125 (327)
T ss_dssp HHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEe
Confidence 48999999999999999985
No 409
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=24.13 E-value=1.1e+02 Score=25.84 Aligned_cols=24 Identities=21% Similarity=0.217 Sum_probs=16.8
Q ss_pred CccccccHHHHHHHHHHcCCEEEE
Q 021783 72 PRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 72 ~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
-.|-+....+++++|+++|+.++.
T Consensus 283 ~~GGit~~~~i~~~A~~~g~~~~~ 306 (392)
T 2poz_A 283 TAGGLMETKKICAMAEAYNMRVAP 306 (392)
T ss_dssp TSSCHHHHHHHHHHHHTTTCEECC
T ss_pred ccCCHHHHHHHHHHHHHcCCeEec
Confidence 356666677777778877776665
No 410
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=23.94 E-value=2.7e+02 Score=22.13 Aligned_cols=84 Identities=17% Similarity=0.130 Sum_probs=47.5
Q ss_pred HHHHhcCCCCeEEE-cCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHH
Q 021783 6 AVTHLLGTGEEIVA-GDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAE 84 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv-~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~ 84 (307)
++..+++.|.+|.+ ....- .....+.. ....|++++..|..|.+++.+++.. ...|+.+.. +. .......+.+
T Consensus 27 l~~~L~~~g~~V~~l~R~~~-~~~~~~~~-l~~~~v~~v~~Dl~d~~~l~~a~~~-~d~vi~~a~--~~-~~~~~~~l~~ 100 (318)
T 2r6j_A 27 MVKGSLKLGHPTYVFTRPNS-SKTTLLDE-FQSLGAIIVKGELDEHEKLVELMKK-VDVVISALA--FP-QILDQFKILE 100 (318)
T ss_dssp HHHHHHHTTCCEEEEECTTC-SCHHHHHH-HHHTTCEEEECCTTCHHHHHHHHTT-CSEEEECCC--GG-GSTTHHHHHH
T ss_pred HHHHHHHCCCcEEEEECCCC-chhhHHHH-hhcCCCEEEEecCCCHHHHHHHHcC-CCEEEECCc--hh-hhHHHHHHHH
Confidence 44456666766643 22211 11111111 1345789988899999999999874 444443321 11 1334678888
Q ss_pred HHHHcC-CEEEE
Q 021783 85 MAHAHG-ALLLV 95 (307)
Q Consensus 85 ~~~~~~-~~li~ 95 (307)
.|++.+ +.-++
T Consensus 101 aa~~~g~v~~~v 112 (318)
T 2r6j_A 101 AIKVAGNIKRFL 112 (318)
T ss_dssp HHHHHCCCCEEE
T ss_pred HHHhcCCCCEEE
Confidence 998887 54443
No 411
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=23.87 E-value=41 Score=31.31 Aligned_cols=27 Identities=22% Similarity=0.225 Sum_probs=22.9
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
|...+++++++-||++|+-||.|-++.
T Consensus 310 Gt~~dfk~lV~~~H~~GI~VilD~V~N 336 (722)
T 3k1d_A 310 GTPDDFRALVDALHQAGIGVIVDWVPA 336 (722)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEEEee
Confidence 334468999999999999999999965
No 412
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=23.80 E-value=2.3e+02 Score=21.15 Aligned_cols=103 Identities=12% Similarity=0.119 Sum_probs=52.9
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCCCh---HHHHhhcCCCceEEEEeCCCCCccccccHHHH
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDL---DEVASAIGPWTKLVWVESPTNPRQQICDIRKI 82 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~---~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l 82 (307)
....+ +.|-.|+++.. ++...++ +..+.+++.++.... ..|.++-+...+.-++.+++... .++.+
T Consensus 44 ~a~~~-~~~~dVIISRG---gta~~lr---~~~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~----~~~~~ 112 (196)
T 2q5c_A 44 IAFGL-QDEVDAIISRG---ATSDYIK---KSVSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIV----DKHEI 112 (196)
T ss_dssp HHHHH-TTTCSEEEEEH---HHHHHHH---TTCSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSS----CHHHH
T ss_pred HHHHh-cCCCeEEEECC---hHHHHHH---HhCCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhh----HHHHH
Confidence 33445 66777888884 4443333 446799999998633 33444433344666666554433 34444
Q ss_pred HHHHHHc-CCEEEEeCccCCCCcCCccCCCccEEEecc
Q 021783 83 AEMAHAH-GALLLVDNSIMSPVLSRPLELGADIVMHSA 119 (307)
Q Consensus 83 ~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~d~~~~s~ 119 (307)
.++..-. ..+.+.+..............|+++++|+.
T Consensus 113 ~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~ 150 (196)
T 2q5c_A 113 EAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGK 150 (196)
T ss_dssp HHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECH
T ss_pred HHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCH
Confidence 4443211 112222221112223344455888888876
No 413
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=23.64 E-value=40 Score=22.41 Aligned_cols=35 Identities=11% Similarity=0.048 Sum_probs=20.6
Q ss_pred HHhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC
Q 021783 8 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 47 (307)
Q Consensus 8 ~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 47 (307)
-.+++|||.|++-.+.+..-. . ++.+.-++++++.
T Consensus 51 Arl~~~GD~vII~aY~~~~~~----e-~~~~~P~vv~vd~ 85 (102)
T 3plx_B 51 ARLAEVGDKVIIMSYADFNEE----E-AKTFKPKVVFVDE 85 (102)
T ss_dssp GGGCCTTCEEEEEEEEEEEHH----H-HHHCCCEEEEECT
T ss_pred HhccCCCCEEEEEEcccCCHH----H-HhcCCCEEEEECC
Confidence 346789999988776654433 1 2334455555543
No 414
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=23.60 E-value=36 Score=23.05 Aligned_cols=20 Identities=5% Similarity=-0.059 Sum_probs=14.4
Q ss_pred HHhcCCCCeEEEcCCCCcch
Q 021783 8 THLLGTGEEIVAGDDLYGGT 27 (307)
Q Consensus 8 ~~~~~~gd~Vlv~~~~~~~~ 27 (307)
-.+++|||.|++-.+.+..-
T Consensus 79 Ar~~~~GD~vII~ay~~~~~ 98 (114)
T 3oug_A 79 ARRCEIGDQLFIISYTQVDP 98 (114)
T ss_dssp GGGCCTTCEEEEEEEEEECT
T ss_pred HhccCCCCEEEEEECCcCCH
Confidence 34788999999877665443
No 415
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=23.54 E-value=75 Score=27.32 Aligned_cols=84 Identities=11% Similarity=0.109 Sum_probs=55.2
Q ss_pred hcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHH
Q 021783 10 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMA 86 (307)
Q Consensus 10 ~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~~~~l~~~~ 86 (307)
.+.+=+-..+.+|..+.....+..+.+..++++..=+. .++.++.+.+.. ...++.+. + +-.|-+.+..+++++|
T Consensus 279 ~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik-~-~~~GGitea~~ia~lA 356 (427)
T 2pa6_A 279 LVDEYPIVSIEDPFHEEDFEGFAMITKELDIQIVGDDLFVTNVERLRKGIEMKAANALLLK-V-NQIGTLSEAVDAAQLA 356 (427)
T ss_dssp HHHHSCEEEEECCSCTTCHHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC-H-HHHCSHHHHHHHHHHH
T ss_pred HHhhCCCcEEEcCCChhhHHHHHHHHhhCCCeEEeCccccCCHHHHHHHHHhCCCCEEEEc-c-cccCCHHHHHHHHHHH
Confidence 34444567788887766666666666666666654332 247888877763 33444443 2 2357777888999999
Q ss_pred HHcCCEEEE
Q 021783 87 HAHGALLLV 95 (307)
Q Consensus 87 ~~~~~~li~ 95 (307)
+++|+.++.
T Consensus 357 ~~~g~~~~~ 365 (427)
T 2pa6_A 357 FRNGYGVVV 365 (427)
T ss_dssp HTTTCEEEE
T ss_pred HHcCCeEEE
Confidence 999988766
No 416
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=23.26 E-value=67 Score=25.70 Aligned_cols=57 Identities=11% Similarity=0.001 Sum_probs=34.8
Q ss_pred CCeEEEcCCC-Ccc-hHHHHhhhcccCCcEEEEecCC-----ChHHHHhhcC--CCceEEEEeCCC
Q 021783 14 GEEIVAGDDL-YGG-TDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG--PWTKLVWVESPT 70 (307)
Q Consensus 14 gd~Vlv~~~~-~~~-~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~--~~~~~v~~~~~~ 70 (307)
|.+|++..+. -.+ -...+...++..|++++.+|.. +.+.+.+.+. .+...+++++++
T Consensus 21 g~~vlvtr~~~~~~~~~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~l~~~l~~~~~~d~lifTS~n 86 (286)
T 1jr2_A 21 HMKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLIFTSPR 86 (286)
T ss_dssp -CEEEEEESSCCCBTTBCHHHHHHHTTTCEEEEEECEEEEECCHHHHHHHHTCGGGCSEEEECCHH
T ss_pred CCEEEEEcCCCCCCCCCcHHHHHHHHCCCceEEEeeEEEecCCHHHHHHHHhCcccccEEEEeCHH
Confidence 6788887765 322 0011226678889999999873 5566666664 345677766543
No 417
>1wcw_A Uroporphyrinogen III synthase; congenital erythropoietic porph structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=23.13 E-value=66 Score=25.22 Aligned_cols=55 Identities=7% Similarity=0.006 Sum_probs=35.7
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhh---cCCCceEEEEeCCC
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASA---IGPWTKLVWVESPT 70 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~---l~~~~~~v~~~~~~ 70 (307)
.|.+|+++.+.- ...+...++..|+++..+|.. |.+.+.+. +..+...+++++++
T Consensus 7 ~g~~vlvtr~~~---~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~l~~~~~~l~~~~d~iiftS~~ 69 (261)
T 1wcw_A 7 DAVRVAYAGLRR---KEAFKALAEKLGFTPLLFPVQATEKVPVPEYRDQVRALAQGVDLFLATTGV 69 (261)
T ss_dssp -CCEEEECCSTT---HHHHHHHHHHTTCEEEECCCEEEEECCGGGGHHHHHHHHTCCSEEEECCHH
T ss_pred CCCEEEEeCCCc---hHHHHHHHHHCCCcEEEeccEEEecCCHHHHHHHHHhhccCCCEEEEeCHH
Confidence 378999999873 344557788899999998862 44444443 32245677766543
No 418
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=23.11 E-value=2.6e+02 Score=21.95 Aligned_cols=84 Identities=15% Similarity=0.098 Sum_probs=48.0
Q ss_pred CCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC-CChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcC
Q 021783 12 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG 90 (307)
Q Consensus 12 ~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~ 90 (307)
..+=.|++...-|.+....+....+..+.++..=+. .|.-++.++..-...+|.+....= ....++++.+.|++.|
T Consensus 74 A~~IsVlTd~~~F~gs~~dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~l---~~~~l~~l~~~a~~lG 150 (251)
T 1i4n_A 74 ADAISILTEKHYFKGDPAFVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARIL---TAEQIKEIYEAAEELG 150 (251)
T ss_dssp CSEEEEECCCSSSCCCTHHHHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGGS---CHHHHHHHHHHHHTTT
T ss_pred CCceEEEecccccCCCHHHHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEecccC---CHHHHHHHHHHHHHcC
Confidence 334455555555555555555555555555543222 255566655444455565543210 0135888999999999
Q ss_pred CEEEEeCc
Q 021783 91 ALLLVDNS 98 (307)
Q Consensus 91 ~~li~D~a 98 (307)
..+++|.-
T Consensus 151 l~~lvEv~ 158 (251)
T 1i4n_A 151 MDSLVEVH 158 (251)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEeC
Confidence 98888763
No 419
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=23.10 E-value=49 Score=30.98 Aligned_cols=25 Identities=12% Similarity=0.223 Sum_probs=22.4
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccC
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
..+++++++.||++|+.||.|-++.
T Consensus 272 ~~efk~lV~~~H~~Gi~VilDvV~N 296 (750)
T 1bf2_A 272 TAEFQAMVQAFHNAGIKVYMDVVYN 296 (750)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5679999999999999999999974
No 420
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=22.97 E-value=45 Score=31.06 Aligned_cols=25 Identities=16% Similarity=0.315 Sum_probs=22.1
Q ss_pred cccHHHHHHHHHHcCCEEEEeCccC
Q 021783 76 ICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
..+++++++.||++|+.||.|-++.
T Consensus 266 ~~dfk~lv~~~H~~Gi~VilDvV~N 290 (718)
T 2vr5_A 266 VLSFKKMVNELHNAGIEVIIDVVYN 290 (718)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccC
Confidence 3579999999999999999999974
No 421
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=22.96 E-value=50 Score=23.41 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=26.6
Q ss_pred hhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 55 SAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 55 ~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
+.+...++.+++.. |.. -+++.+.|+++|+.++-+.+.+
T Consensus 89 ~~~~~g~~~i~i~~-----~~~--~~~l~~~a~~~Gi~~igpnc~g 127 (145)
T 2duw_A 89 EAIAIGAKTLWLQL-----GVI--NEQAAVLAREAGLSVVMDRCPA 127 (145)
T ss_dssp HHHHHTCCEEECCT-----TCC--CHHHHHHHHTTTCEEECSCCHH
T ss_pred HHHHcCCCEEEEcC-----ChH--HHHHHHHHHHcCCEEEcCCeee
Confidence 33334556666542 222 5889999999999999888754
No 422
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=22.94 E-value=59 Score=26.29 Aligned_cols=59 Identities=17% Similarity=0.054 Sum_probs=36.2
Q ss_pred CCcEEEEecCC-ChHHHHhhcCCCceEEEEeCCCCCcccc-ccHHHHHHHHHHcCCEEEEeCccC
Q 021783 38 TGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 38 ~g~~~~~v~~~-d~~~l~~~l~~~~~~v~~~~~~n~tG~~-~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.++-+..+|.. -++.+++.++...+.+++-+ +|.. .+.+++.+.++++++.++-.++.+
T Consensus 65 ~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi~t----~G~~~~~~~~l~~~a~~~gi~vigPNc~G 125 (288)
T 1oi7_A 65 VDASIIFVPAPAAADAALEAAHAGIPLIVLIT----EGIPTLDMVRAVEEIKALGSRLIGGNCPG 125 (288)
T ss_dssp CSEEEECCCHHHHHHHHHHHHHTTCSEEEECC----SCCCHHHHHHHHHHHHHHTCEEEESSSCE
T ss_pred CCEEEEecCHHHHHHHHHHHHHCCCCEEEEEC----CCCCHHHHHHHHHHHHHcCCEEEeCCCCe
Confidence 34444444432 34556666666777555422 2433 247899999999999888777554
No 423
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=22.92 E-value=1.2e+02 Score=22.69 Aligned_cols=48 Identities=15% Similarity=0.086 Sum_probs=29.3
Q ss_pred eEEEcCCCCcchHHHHhhhcccCCcEEEEecCCChHHHHhhcCCCceEEEEeCCCC
Q 021783 16 EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 71 (307)
Q Consensus 16 ~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n 71 (307)
+|++-++.-. +...+.++++..|++++.+. ++++++.. ..+++..+.+
T Consensus 4 ~I~iiD~g~~-n~~si~~al~~~G~~~~v~~--~~~~l~~~-----D~lilPG~g~ 51 (211)
T 4gud_A 4 NVVIIDTGCA-NISSVKFAIERLGYAVTISR--DPQVVLAA-----DKLFLPGVGT 51 (211)
T ss_dssp CEEEECCCCT-THHHHHHHHHHTTCCEEEEC--CHHHHHHC-----SEEEECCCSC
T ss_pred EEEEEECCCC-hHHHHHHHHHHCCCEEEEEC--CHHHHhCC-----CEEEECCCCC
Confidence 4666676543 22334466788999988754 67777653 3566654443
No 424
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=22.89 E-value=1.9e+02 Score=24.72 Aligned_cols=45 Identities=16% Similarity=0.001 Sum_probs=25.3
Q ss_pred ChHHHHhhcCCC-ceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 49 DLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 49 d~~~l~~~l~~~-~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
+++++++.+..+ ..+|.+. + +-.|-+....+++++|+++|+.++.
T Consensus 292 ~~~~~~~~i~~~~~d~v~ik-~-~~~GGitea~~ia~~A~~~gi~~~~ 337 (428)
T 3bjs_A 292 TRFEFGQMLDAGAVQVWQPD-L-SKCGGITEGIRIAAMASAYRIPINA 337 (428)
T ss_dssp SHHHHHHHHTTCCEEEECCB-T-TTSSCHHHHHHHHHHHHHTTCCBCC
T ss_pred CHHHHHHHHHhCCCCEEEeC-c-cccCCHHHHHHHHHHHHHcCCeEEe
Confidence 556666666533 2333222 2 3356666677778888877765443
No 425
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=22.88 E-value=1.4e+02 Score=24.95 Aligned_cols=37 Identities=22% Similarity=0.260 Sum_probs=23.8
Q ss_pred CCceEEEEeCCCCCcc---------cc--------c--cHHHHHHHHHHcCCEEEE
Q 021783 59 PWTKLVWVESPTNPRQ---------QI--------C--DIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 59 ~~~~~v~~~~~~n~tG---------~~--------~--~~~~l~~~~~~~~~~li~ 95 (307)
.++.++++++.....+ .. + -+..|..+++++|+.+|+
T Consensus 138 ~~~dlvVIDSi~~l~~~~el~g~~G~~q~~~qar~la~~L~~L~~lak~~~~tVI~ 193 (356)
T 3hr8_A 138 GVVDLIVVDSVAALVPRAEIEGAMGDMQVGLQARLMSQALRKIAGSVNKSKAVVIF 193 (356)
T ss_dssp SCCSEEEEECTTTCCCHHHHTTCCCSSCSSHHHHHHHHHHHHHHHHHHTSSCEEEE
T ss_pred cCCCeEEehHhhhhcChhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 4678889987665443 11 0 145566788888876664
No 426
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=22.73 E-value=73 Score=26.02 Aligned_cols=25 Identities=8% Similarity=0.112 Sum_probs=15.8
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCcEEEEe
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 45 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v 45 (307)
+..+++..+.| .+ +++.+|.+...+
T Consensus 190 ~~~~v~~H~af-~Y------fa~~yGl~~~~~ 214 (307)
T 3ujp_A 190 QRFLVSCEGAF-SY------LARDYGMEEIYM 214 (307)
T ss_dssp GCEEEEEESTT-HH------HHHHTTCEEEEE
T ss_pred CCEEEEECchH-HH------HHHHCCCcEEEe
Confidence 45566666665 33 367888887644
No 427
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1
Probab=22.69 E-value=50 Score=30.68 Aligned_cols=32 Identities=19% Similarity=0.130 Sum_probs=26.8
Q ss_pred CCCCccccccHHHHHHHHHHcCCEEEEeCccC
Q 021783 69 PTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 69 ~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
++...|...+++++++-||++|+.||.|-+..
T Consensus 58 Idp~lGt~edfk~LV~aaH~~GIkVIlDvV~N 89 (720)
T 1iv8_A 58 INDELGGEKEYRRLIETAHTIGLGIIQDIVPN 89 (720)
T ss_dssp ECTTTTHHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 34445777789999999999999999999853
No 428
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=22.67 E-value=1.7e+02 Score=21.40 Aligned_cols=37 Identities=14% Similarity=-0.013 Sum_probs=25.6
Q ss_pred HhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE
Q 021783 54 ASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 94 (307)
Q Consensus 54 ~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li 94 (307)
...++++.-+|+++. +|...+.-+.++.+++.|+.+|
T Consensus 111 ~~~~~~~d~vI~iS~----SG~t~~~~~~~~~ak~~g~~vI 147 (198)
T 2xbl_A 111 QALGNEGDVLIGYST----SGKSPNILAAFREAKAKGMTCV 147 (198)
T ss_dssp HHHCCTTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEE
T ss_pred HhhCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCeEE
Confidence 344566665566532 4666788899999999997655
No 429
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=22.65 E-value=2.5e+02 Score=21.18 Aligned_cols=9 Identities=22% Similarity=0.243 Sum_probs=5.3
Q ss_pred cCCEEEEeC
Q 021783 89 HGALLLVDN 97 (307)
Q Consensus 89 ~~~~li~D~ 97 (307)
.++++++|.
T Consensus 165 ~~~pi~v~G 173 (218)
T 3jr2_A 165 LGIELSITG 173 (218)
T ss_dssp TTCEEEEES
T ss_pred CCCCEEEEC
Confidence 356666665
No 430
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=22.63 E-value=1.3e+02 Score=23.50 Aligned_cols=70 Identities=10% Similarity=0.021 Sum_probs=41.3
Q ss_pred chHHHHhhhcccCCcEEEEecCC-ChH----HHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE-EeC
Q 021783 26 GTDRLLSRVTPKTGVVVKRVNTC-DLD----EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL-VDN 97 (307)
Q Consensus 26 ~~~~~~~~~~~~~g~~~~~v~~~-d~~----~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li-~D~ 97 (307)
.....+...++..|.++...... |.+ .++..+..+...+++...... ......+..+.+++.++++| +|.
T Consensus 32 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~--~~~~~~~~~~~~~~~~iPvV~~~~ 107 (298)
T 3tb6_A 32 SIIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSA--LQTPNIGYYLNLEKNGIPFAMINA 107 (298)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTT--SCCTTHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEeccccc--ccCCcHHHHHHHHhcCCCEEEEec
Confidence 33445667788899999888764 443 334444467778877543321 11123345556677788776 443
No 431
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=22.46 E-value=1.1e+02 Score=25.45 Aligned_cols=28 Identities=14% Similarity=0.184 Sum_probs=22.0
Q ss_pred ccccHHHHHHHHHHcCCE--EEEeCccCCC
Q 021783 75 QICDIRKIAEMAHAHGAL--LLVDNSIMSP 102 (307)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~--li~D~a~~~~ 102 (307)
...|+..+.+..++.+++ |++|..|+.+
T Consensus 242 ~~~di~~~~~~l~~~~lp~~VivD~SH~ns 271 (350)
T 1n8f_A 242 SAKHVAEVKEGLNKAGLPAQVMIDFSHANS 271 (350)
T ss_dssp SHHHHHHHHHHHHHTTCCCCEEEECSGGGT
T ss_pred CHHHHHHHHHHHHHcCCCCeEEEECCCccc
Confidence 444688888777778999 9999999853
No 432
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=22.42 E-value=49 Score=26.86 Aligned_cols=59 Identities=20% Similarity=0.110 Sum_probs=35.6
Q ss_pred CCcEEEEecCC-ChHHHHhhcCCCceEEEEeCCCCCcccc-ccHHHHHHHHHHcCCEEEEeCccC
Q 021783 38 TGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 38 ~g~~~~~v~~~-d~~~l~~~l~~~~~~v~~~~~~n~tG~~-~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.++-++.+|.. -++.+++.++...+.+++-+ +|.. .+.+++.+.|+++++.++-.++.+
T Consensus 71 ~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t----~G~~~~~~~~l~~~A~~~gi~viGPNc~G 131 (294)
T 2yv1_A 71 ANASVIFVPAPFAKDAVFEAIDAGIELIVVIT----EHIPVHDTMEFVNYAEDVGVKIIGPNTPG 131 (294)
T ss_dssp CCEEEECCCHHHHHHHHHHHHHTTCSEEEECC----SCCCHHHHHHHHHHHHHHTCEEECSSCCE
T ss_pred CCEEEEccCHHHHHHHHHHHHHCCCCEEEEEC----CCCCHHHHHHHHHHHHHcCCEEEcCCCce
Confidence 34444444432 24555666666677554321 2333 257899999999999888777543
No 433
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=22.40 E-value=1.9e+02 Score=23.28 Aligned_cols=68 Identities=10% Similarity=0.072 Sum_probs=40.9
Q ss_pred CCcchHHHHhhhcccCCcEEEEecCC-ChH----HHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEE-Ee
Q 021783 23 LYGGTDRLLSRVTPKTGVVVKRVNTC-DLD----EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL-VD 96 (307)
Q Consensus 23 ~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~----~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li-~D 96 (307)
-|......+...++..|..+...... +.+ .++..+..+...+++....... ...+.+++.++++| +|
T Consensus 76 ~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~-------~~~~~l~~~~iPvV~~~ 148 (339)
T 3h5o_A 76 VFLETLTGIETVLDAAGYQMLIGNSHYDAGQELQLLRAYLQHRPDGVLITGLSHAE-------PFERILSQHALPVVYMM 148 (339)
T ss_dssp TTHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCT-------THHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeCCCCCH-------HHHHHHhcCCCCEEEEe
Confidence 34445555677888899998877664 443 3344445677777776433211 34455667787766 45
Q ss_pred C
Q 021783 97 N 97 (307)
Q Consensus 97 ~ 97 (307)
.
T Consensus 149 ~ 149 (339)
T 3h5o_A 149 D 149 (339)
T ss_dssp S
T ss_pred e
Confidence 4
No 434
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=22.31 E-value=2.2e+02 Score=21.95 Aligned_cols=89 Identities=12% Similarity=0.121 Sum_probs=46.4
Q ss_pred hhcccCCcEEEEe--cCCChHHHHhhcCCCceEEEEe--CCCCCccccc-c-----HHHHHHHHHHc--CCEEEEeCccC
Q 021783 33 RVTPKTGVVVKRV--NTCDLDEVASAIGPWTKLVWVE--SPTNPRQQIC-D-----IRKIAEMAHAH--GALLLVDNSIM 100 (307)
Q Consensus 33 ~~~~~~g~~~~~v--~~~d~~~l~~~l~~~~~~v~~~--~~~n~tG~~~-~-----~~~l~~~~~~~--~~~li~D~a~~ 100 (307)
+.++..|.++... |....+.++..+. ....|++. +|.. .|... + ++++.++..++ ++.+-+|+--.
T Consensus 100 ~~i~~~G~k~gv~lnp~tp~~~~~~~l~-~~D~VlvmsV~pGf-ggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~ 177 (231)
T 3ctl_A 100 DEIRRHDMKVGLILNPETPVEAMKYYIH-KADKITVMTVDPGF-AGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN 177 (231)
T ss_dssp HHHHHTTCEEEEEECTTCCGGGGTTTGG-GCSEEEEESSCTTC-SSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS
T ss_pred HHHHHcCCeEEEEEECCCcHHHHHHHHh-cCCEEEEeeeccCc-CCccccHHHHHHHHHHHHHHhccCCCceEEEECCcC
Confidence 5566677764332 2223444444443 33445433 3332 24332 1 45666666543 68888998554
Q ss_pred CCCcCCccCCCccEEEecccccc
Q 021783 101 SPVLSRPLELGADIVMHSATKFI 123 (307)
Q Consensus 101 ~~~~~~~~~~~~d~~~~s~~K~~ 123 (307)
........+.|+|+++.+.|-.+
T Consensus 178 ~~~~~~~~~aGAd~~V~G~saif 200 (231)
T 3ctl_A 178 QATYEKLMAAGADVFIVGTSGLF 200 (231)
T ss_dssp TTTHHHHHHHTCCEEEECTTTTG
T ss_pred HHHHHHHHHcCCCEEEEccHHHh
Confidence 43334445568888887633344
No 435
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=22.23 E-value=1.3e+02 Score=21.68 Aligned_cols=65 Identities=12% Similarity=0.126 Sum_probs=41.8
Q ss_pred hHHHHhhhcccCCcEEEEecCCChHHHHhhcC---CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 27 TDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 27 ~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
....+...+...|+++.....+.-.+|...|. .+...|++ ||-+.+..=-.|.+.....++++|+
T Consensus 31 i~~~l~~~a~~~g~~l~~~QSN~EGeLId~Ih~a~~~~dgiII----NpgA~THtSvAlrDAl~~v~~P~VE 98 (154)
T 1uqr_A 31 IEQHLQQSAQAQGYELDYFQANGEESLINRIHQAFQNTDFIII----NPGAFTHTSVAIRDALLAVSIPFIE 98 (154)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSHHHHHHHHHHTTTTCCEEEE----ECTTHHHHCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeeCCHHHHHHHHHHhhhcCcEEEE----CcchhccchHHHHHHHHhCCCCEEE
Confidence 34446677788899999999887666655553 34566665 4555554433456666666777764
No 436
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=22.15 E-value=1.1e+02 Score=24.95 Aligned_cols=72 Identities=13% Similarity=0.164 Sum_probs=41.9
Q ss_pred EEEEecCCChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCccCCCCcC----CccCCCccEEE
Q 021783 41 VVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS----RPLELGADIVM 116 (307)
Q Consensus 41 ~~~~v~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~d~~~ 116 (307)
..+.+..++++++++++......|.+++.+. -++++.++..+. .+.+-. +.|... .....|+|+++
T Consensus 208 ~kIeVEv~tl~e~~eAl~aGaDiImLDn~s~-----~~l~~av~~~~~-~v~lea----SGGIt~~~i~~~A~tGVD~Is 277 (300)
T 3l0g_A 208 EYIAIECDNISQVEESLSNNVDMILLDNMSI-----SEIKKAVDIVNG-KSVLEV----SGCVNIRNVRNIALTGVDYIS 277 (300)
T ss_dssp CCEEEEESSHHHHHHHHHTTCSEEEEESCCH-----HHHHHHHHHHTT-SSEEEE----ESSCCTTTHHHHHTTTCSEEE
T ss_pred CCEEEEECCHHHHHHHHHcCCCEEEECCCCH-----HHHHHHHHhhcC-ceEEEE----ECCCCHHHHHHHHHcCCCEEE
Confidence 4456667789999999987788899886422 345555555442 222221 112221 33455899877
Q ss_pred e-ccccc
Q 021783 117 H-SATKF 122 (307)
Q Consensus 117 ~-s~~K~ 122 (307)
. +..+.
T Consensus 278 vGalths 284 (300)
T 3l0g_A 278 IGCITNS 284 (300)
T ss_dssp CGGGTSS
T ss_pred eCccccC
Confidence 4 43443
No 437
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=22.14 E-value=57 Score=26.41 Aligned_cols=22 Identities=18% Similarity=0.299 Sum_probs=19.1
Q ss_pred cHHHHHHHHHHcCCEEEEeCcc
Q 021783 78 DIRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~ 99 (307)
.++++++.|.++|+++|+|--.
T Consensus 81 ~ld~~v~~a~~~Gi~Vild~H~ 102 (303)
T 7a3h_A 81 KVKEAVEAAIDLDIYVIIDWHI 102 (303)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEecc
Confidence 4889999999999999998743
No 438
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=22.08 E-value=1.1e+02 Score=21.67 Aligned_cols=65 Identities=9% Similarity=0.002 Sum_probs=41.3
Q ss_pred hHHHHhhhcccCCcEEEEecCCChHHHHhhcC---CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 27 TDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 27 ~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
....+...+...|.++.....+.-.+|...+. .+...|++ ||-+.+..=-.|.+.....++++|+
T Consensus 30 i~~~l~~~a~~~g~~~~~~QSN~EgeLid~Ih~a~~~~dgiii----NpgA~THtSvAlrDAl~~v~~P~VE 97 (143)
T 1gqo_A 30 IETDLFQFAEALHIQLTFFQSNHEGDLIDAIHEAEEQYSGIVL----NPGALSHYSYAIRDAVSSISLPVVE 97 (143)
T ss_dssp HHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHHTTTCSEEEE----ECGGGGGTCHHHHHHHHTSCSCEEE
T ss_pred HHHHHHHHHHHcCCEEEEEeeCCHHHHHHHHHHhhhcCcEEEE----ccchhccccHHHHHHHHhCCCCEEE
Confidence 34445567778889999888886655555553 34566665 4555554434566666667777664
No 439
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=22.07 E-value=3.1e+02 Score=22.07 Aligned_cols=85 Identities=14% Similarity=0.134 Sum_probs=45.1
Q ss_pred HHHHhcCCCCeEEEcCCCCcchHHHHhhhccc------CCcEEEEecCCChHHHHhhcCCCceEEEEeCC-CCCccccc-
Q 021783 6 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK------TGVVVKRVNTCDLDEVASAIGPWTKLVWVESP-TNPRQQIC- 77 (307)
Q Consensus 6 ~~~~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~------~g~~~~~v~~~d~~~l~~~l~~~~~~v~~~~~-~n~tG~~~- 77 (307)
++..+++.|.+|.+..-.-......+...... .+++++..+..|.+++++.+. +..+|+-+.. .++.....
T Consensus 41 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~Vih~A~~~~~~~~~~~ 119 (351)
T 3ruf_A 41 LLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-GVDHVLHQAALGSVPRSIVD 119 (351)
T ss_dssp HHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-TCSEEEECCCCCCHHHHHHC
T ss_pred HHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-CCCEEEECCccCCcchhhhC
Confidence 34446677877765432211111111111111 567888888889999999887 4455554322 11111101
Q ss_pred ----------cHHHHHHHHHHcCC
Q 021783 78 ----------DIRKIAEMAHAHGA 91 (307)
Q Consensus 78 ----------~~~~l~~~~~~~~~ 91 (307)
-...+.+.|++.++
T Consensus 120 ~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 120 PITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 13457888888875
No 440
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=21.89 E-value=1.1e+02 Score=26.11 Aligned_cols=23 Identities=22% Similarity=0.205 Sum_probs=11.7
Q ss_pred ccccccHHHHHHHHHHcCCEEEE
Q 021783 73 RQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
.|-+....+++++|+++|+.++.
T Consensus 303 ~GGit~~~~ia~~A~~~gi~~~~ 325 (410)
T 2gl5_A 303 CGGITEGKKICDYANIYDTTVQV 325 (410)
T ss_dssp TTHHHHHHHHHHHHHTTTCEECC
T ss_pred cCCHHHHHHHHHHHHHcCCeEee
Confidence 34444455555555555554443
No 441
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=21.50 E-value=72 Score=25.89 Aligned_cols=59 Identities=20% Similarity=0.129 Sum_probs=36.7
Q ss_pred CCcEEEEecCC-ChHHHHhhcCCCceEEEEeCCCCCcccc-ccHHHHHHHHHHcCCEEEEeCccC
Q 021783 38 TGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 38 ~g~~~~~v~~~-d~~~l~~~l~~~~~~v~~~~~~n~tG~~-~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
.++-++.+|.. -++.+++.++...+.+++.+ +|.. .+.+++.+.|+++++.++-.++.+
T Consensus 72 ~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t----~G~~~~~~~~l~~~A~~~gi~viGPNc~G 132 (297)
T 2yv2_A 72 INTSIVFVPAPFAPDAVYEAVDAGIRLVVVIT----EGIPVHDTMRFVNYARQKGATIIGPNCPG 132 (297)
T ss_dssp CCEEEECCCGGGHHHHHHHHHHTTCSEEEECC----CCCCHHHHHHHHHHHHHHTCEEECSSSCE
T ss_pred CCEEEEecCHHHHHHHHHHHHHCCCCEEEEEC----CCCCHHHHHHHHHHHHHcCCEEEcCCCCe
Confidence 45555555543 34556666666777555421 2333 247899999999999888777543
No 442
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=21.47 E-value=58 Score=27.82 Aligned_cols=60 Identities=20% Similarity=0.199 Sum_probs=36.8
Q ss_pred CCCeEEE------cCCCCcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcC---CCceEEEEeCCCCC
Q 021783 13 TGEEIVA------GDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIG---PWTKLVWVESPTNP 72 (307)
Q Consensus 13 ~gd~Vlv------~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~---~~~~~v~~~~~~n~ 72 (307)
-||+++- +.-.+.++...+...++..|++++.... ||.+.+.+++. .+..+|+++.-.++
T Consensus 188 tGdEl~~~g~~~~~G~i~DsN~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlVittGG~s~ 258 (402)
T 1uz5_A 188 TGNEIVPPGNELKPGQIYDINGRALCDAINELGGEGIFMGVARDDKESLKALIEKAVNVGDVVVISGGASG 258 (402)
T ss_dssp ECTTEECTTSCCCTTCEECCHHHHHHHHHHHHTSEEEEEEEECSSHHHHHHHHHHHHHHCSEEEEECCC--
T ss_pred cCccccCCCCCCCCCcEEcchHHHHHHHHHhCCCeEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEcCCCCC
Confidence 3677752 1223445555566778888998876543 68888877775 24567777655444
No 443
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=21.35 E-value=65 Score=25.79 Aligned_cols=21 Identities=14% Similarity=0.275 Sum_probs=18.4
Q ss_pred cHHHHHHHHHHcCCEEEEeCc
Q 021783 78 DIRKIAEMAHAHGALLLVDNS 98 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a 98 (307)
.++++.+.|.++|+++|+|--
T Consensus 80 ~ld~~v~~a~~~Gi~vild~h 100 (293)
T 1tvn_A 80 RLDTVVNAAIAEDMYVIIDFH 100 (293)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcC
Confidence 477899999999999999863
No 444
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=21.31 E-value=63 Score=25.95 Aligned_cols=20 Identities=15% Similarity=0.233 Sum_probs=18.0
Q ss_pred cHHHHHHHHHHcCCEEEEeC
Q 021783 78 DIRKIAEMAHAHGALLLVDN 97 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~ 97 (307)
.++++.++|.++|++||.|-
T Consensus 91 ~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 91 DMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEe
Confidence 48999999999999999875
No 445
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=21.13 E-value=82 Score=23.11 Aligned_cols=59 Identities=8% Similarity=0.022 Sum_probs=36.7
Q ss_pred CcchHHHHhhhcccCCcEEEEecC--CChHHHHhhcC----C-CceEEEEeCCCCCccccccHHHH
Q 021783 24 YGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIG----P-WTKLVWVESPTNPRQQICDIRKI 82 (307)
Q Consensus 24 ~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~l~----~-~~~~v~~~~~~n~tG~~~~~~~l 82 (307)
+.++...+...++..|+++..... ||.+++.+++. . +..+|+++.-..++-.-.-.+.+
T Consensus 26 ~D~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D~t~ea~ 91 (172)
T 1mkz_A 26 DDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEAL 91 (172)
T ss_dssp GCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTCCHHHHH
T ss_pred cCccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCCCHHHHH
Confidence 334445566777888988765443 68887777765 2 36788887666655433323333
No 446
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=20.89 E-value=1.9e+02 Score=24.21 Aligned_cols=46 Identities=9% Similarity=0.085 Sum_probs=28.3
Q ss_pred ChHHHHhhcCC-CceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEe
Q 021783 49 DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 96 (307)
Q Consensus 49 d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D 96 (307)
+++++++.+.. ...++.+. -+..|-+....+++++|+++|+.++.=
T Consensus 247 ~~~~~~~~i~~~~~d~v~ik--~~~~GGit~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 247 GPAQYVPLLSQRCLDIIQPD--VMHVNGIDEFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp SHHHHHHHHHTTCCSEECCC--TTTTTHHHHHHHHHHHHHHHTCEECCC
T ss_pred CHHHHHHHHHcCCCCEEecC--ccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 45556655542 23333322 233566777888899999998877655
No 447
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=20.81 E-value=74 Score=27.96 Aligned_cols=59 Identities=12% Similarity=0.149 Sum_probs=37.4
Q ss_pred ccCCcEEEEecCC-ChHHHHhhcCCCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEEeCc
Q 021783 36 PKTGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 98 (307)
Q Consensus 36 ~~~g~~~~~v~~~-d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~D~a 98 (307)
...++-++.+|.. -++.+++..+...++|+++ ..-+ ..+..++.++|+++|+.++==++
T Consensus 35 ~~~DlavI~vPa~~v~~~v~e~~~~Gv~~viis-~Gf~---~~~~~~l~~~A~~~g~rliGPNc 94 (480)
T 3dmy_A 35 PDANLALISVAGEYAAELANQALDRNLNVMMFS-DNVT---LEDEIQLKTRAREKGLLVMGPDC 94 (480)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHTTCEEEECC-CCCC---HHHHHHHHHHHHHTTCCEECSSC
T ss_pred CCCCEEEEecCHHHHHHHHHHHHhcCCCEEEEC-CCCC---HHHHHHHHHHHHHcCCEEEecCc
Confidence 3455666666643 3466677777777854443 2211 34577999999999988885444
No 448
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=20.75 E-value=53 Score=28.61 Aligned_cols=51 Identities=16% Similarity=0.101 Sum_probs=32.3
Q ss_pred hHHHHhhcCCCceEEEEeCCCC-Cccc--cccHHHHHHHHHHcCCEEEEeCccC
Q 021783 50 LDEVASAIGPWTKLVWVESPTN-PRQQ--ICDIRKIAEMAHAHGALLLVDNSIM 100 (307)
Q Consensus 50 ~~~l~~~l~~~~~~v~~~~~~n-~tG~--~~~~~~l~~~~~~~~~~li~D~a~~ 100 (307)
++.+++.+....+.+++.+..- .+|. ..--+++.+.|+++|+.++-+++.+
T Consensus 78 ~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~viGPnc~G 131 (457)
T 2csu_A 78 KDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNCVG 131 (457)
T ss_dssp HHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEECSSCCE
T ss_pred HHHHHHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCEEEcCCcce
Confidence 4555666666677666543222 2332 0116789999999999999888754
No 449
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=20.72 E-value=1.8e+02 Score=24.48 Aligned_cols=23 Identities=22% Similarity=0.180 Sum_probs=14.6
Q ss_pred ccccccHHHHHHHHHHcCCEEEE
Q 021783 73 RQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
.|-+....+++++|+++|+.+++
T Consensus 286 ~GGit~~~~ia~~A~~~gi~~~~ 308 (393)
T 1wuf_A 286 VGGMSSALKIAEYCALNEILVWC 308 (393)
T ss_dssp GTSHHHHHHHHHHHHHTTCEEEE
T ss_pred hCCHHHHHHHHHHHHHcCCeEEe
Confidence 45555566677777777766654
No 450
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=20.71 E-value=66 Score=25.82 Aligned_cols=23 Identities=22% Similarity=0.270 Sum_probs=14.2
Q ss_pred CCCeEEEcCCCCcchHHHHhhhcccCCcEE
Q 021783 13 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVV 42 (307)
Q Consensus 13 ~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~ 42 (307)
++..+++..+.| .++ ++.+|.+.
T Consensus 173 ~~~~~v~~H~af-~Yf------~~~yGl~~ 195 (284)
T 2prs_A 173 KGKGYFVFHDAY-GYF------EKQFGLTP 195 (284)
T ss_dssp TTCCEEEEESCC-HHH------HHHHTCCC
T ss_pred CCCeEEEECccH-HHH------HHHCCCeE
Confidence 466788877766 343 55666553
No 451
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=20.70 E-value=68 Score=25.81 Aligned_cols=20 Identities=5% Similarity=0.328 Sum_probs=18.4
Q ss_pred cHHHHHHHHHHcCCEEEEeC
Q 021783 78 DIRKIAEMAHAHGALLLVDN 97 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~ 97 (307)
.++++++.|.++|+++|+|-
T Consensus 66 ~ld~~v~~a~~~Gi~Vild~ 85 (302)
T 1bqc_A 66 DVANVISLCKQNRLICMLEV 85 (302)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEe
Confidence 48999999999999999995
No 452
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=20.64 E-value=67 Score=26.82 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=19.4
Q ss_pred cHHHHHHHHHHcCCEEEEeCcc
Q 021783 78 DIRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 78 ~~~~l~~~~~~~~~~li~D~a~ 99 (307)
.++++++.|+++|+++|+|--.
T Consensus 91 ~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 91 LVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEecc
Confidence 4889999999999999998754
No 453
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=20.60 E-value=71 Score=22.45 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=22.7
Q ss_pred HhcCCCCeEEEcCCCCcchHHHHhhhcccCCcEEEEecC
Q 021783 9 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 47 (307)
Q Consensus 9 ~~~~~gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 47 (307)
.++++||.|++-.+.+..-. . ++.+.-++++++.
T Consensus 77 rl~~~GD~vII~aYa~~~~~----E-~~~~~P~vV~vd~ 110 (139)
T 2c45_A 77 HLVHPGDLVILIAYATMDDA----R-ARTYQPRIVFVDA 110 (139)
T ss_dssp TTSCTTCEEEEEECCEEEHH----H-HHSCCCEEEECCT
T ss_pred ccCCCCCEEEEEECCcCCHH----H-hccCCCeEEEECC
Confidence 46789999998888775543 2 3445556666654
No 454
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=20.59 E-value=61 Score=25.99 Aligned_cols=22 Identities=27% Similarity=0.421 Sum_probs=19.3
Q ss_pred cccHHHHHHHHHHcCCEEEEeC
Q 021783 76 ICDIRKIAEMAHAHGALLLVDN 97 (307)
Q Consensus 76 ~~~~~~l~~~~~~~~~~li~D~ 97 (307)
...++++++.|.++|+++|+|-
T Consensus 63 ~~~ld~~v~~a~~~Gi~Vild~ 84 (294)
T 2whl_A 63 IDTIREVIELAEQNKMVAVVEV 84 (294)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 3358999999999999999985
No 455
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=20.58 E-value=69 Score=26.26 Aligned_cols=26 Identities=12% Similarity=0.263 Sum_probs=22.1
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCcc
Q 021783 74 QQICDIRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 74 G~~~~~~~l~~~~~~~~~~li~D~a~ 99 (307)
...+.++++..+|++.|++++.|--|
T Consensus 198 dk~~sv~dlL~i~~~~gIPiVfD~hH 223 (310)
T 3tc3_A 198 DKVFSVKDCLWISERTGIPVIFDNLH 223 (310)
T ss_dssp SSSCCHHHHHHHHHHHCCCEEEEHHH
T ss_pred CceecHHHHHHHHhhcCCCeEeeHhh
Confidence 45578999999999999999999765
No 456
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=20.55 E-value=61 Score=27.01 Aligned_cols=23 Identities=17% Similarity=0.274 Sum_probs=19.9
Q ss_pred ccHHHHHHHHHHcCCEEEEeCcc
Q 021783 77 CDIRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 77 ~~~~~l~~~~~~~~~~li~D~a~ 99 (307)
..++++++.|.++|+++|+|--.
T Consensus 87 ~~ld~~v~~a~~~GiyVIlDlH~ 109 (345)
T 3jug_A 87 DTVREVIELAEQNKMVAVVEVHD 109 (345)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECT
T ss_pred HHHHHHHHHHHHCCCEEEEEecc
Confidence 35899999999999999998743
No 457
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=20.52 E-value=1e+02 Score=22.42 Aligned_cols=47 Identities=9% Similarity=0.054 Sum_probs=28.7
Q ss_pred CcEEEEecC--CChHHHHhhcC-----CCceEEEEeCCCCCccccccHHHHHHH
Q 021783 39 GVVVKRVNT--CDLDEVASAIG-----PWTKLVWVESPTNPRQQICDIRKIAEM 85 (307)
Q Consensus 39 g~~~~~v~~--~d~~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~~~~l~~~ 85 (307)
|+++..... ||.+++.+++. .+..+|+++.-..++-.-.-.+.+.++
T Consensus 43 G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~t~~a~~~~ 96 (167)
T 1uuy_A 43 GAKVVATAVVPDEVERIKDILQKWSDVDEMDLILTLGGTGFTPRDVTPEATKKV 96 (167)
T ss_dssp SEEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHHHH
T ss_pred CcEEeEEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCchHHHHHHH
Confidence 887765443 68877777664 256788887666654433334445444
No 458
>3d8t_A Uroporphyrinogen-III synthase; heme biosynthesis, lyase; 1.60A {Thermus thermophilus} PDB: 3d8r_A 3d8s_A 3d8n_A
Probab=20.28 E-value=1.1e+02 Score=24.41 Aligned_cols=54 Identities=9% Similarity=-0.009 Sum_probs=35.3
Q ss_pred CCeEEEcCCCCcchHHHHhhhcccCCcEEEEecCC-----ChHHHHhh---cCCCceEEEEeCCC
Q 021783 14 GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASA---IGPWTKLVWVESPT 70 (307)
Q Consensus 14 gd~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~---l~~~~~~v~~~~~~ 70 (307)
|.+|+++.+.- ...+...++..|++++.+|.. |.+.+.+. +..+...+++++++
T Consensus 33 G~~VlvtR~~~---~~~l~~~L~~~G~~v~~~P~i~i~~~~~~~l~~~l~~l~~~~d~lifTS~n 94 (286)
T 3d8t_A 33 TMRIAYAGLRR---KEEFKALAEKLGFTPLLFPVQATEKVPVPEYRDQVRELAQGVDLFLATTGV 94 (286)
T ss_dssp CCEEEECCSSC---HHHHHHHHHHHTCEEEECCCEEEEEEECTTHHHHHHHHTTCCSEEEECCHH
T ss_pred CCEEEEeCCCc---hHHHHHHHHHCCCeEEEeeeEEEecCCHHHHHHHHHhhccCCCEEEEECHH
Confidence 78999999873 344557778899999988863 33334333 43345677766543
No 459
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=20.27 E-value=96 Score=22.24 Aligned_cols=65 Identities=11% Similarity=-0.028 Sum_probs=42.7
Q ss_pred hHHHHhhhcccCCcEEEEecCCChHHHHhhcC----CCceEEEEeCCCCCccccccHHHHHHHHHHcCCEEEE
Q 021783 27 TDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 95 (307)
Q Consensus 27 ~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~~~~l~~~~~~~~~~li~ 95 (307)
....+...+...|.++.....+.-.+|...|. .+...|++ ||-+.+..=-.|.+.....++++|+
T Consensus 29 i~~~l~~~a~~~g~~v~~~QSN~EgeLId~Ih~a~~~~~dgiII----NpgA~THtSvAlrDAl~~v~~P~VE 97 (149)
T 2uyg_A 29 LEALCEAWGAELGLGVVFRQTNYEGQLIEWVQQAHQEGFLAIVL----NPGALTHYSYALLDAIRAQPLPVVE 97 (149)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTTTTTCSEEEE----ECGGGGGTCHHHHHHHHTSCSCEEE
T ss_pred HHHHHHHHHHHcCCEEEEEeeCCHHHHHHHHHHhccCCeeEEEE----ccchhccccHHHHHHHHhCCCCEEE
Confidence 34456677788899999998886656555553 32566766 4555555444567777777877764
No 460
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=20.21 E-value=1.6e+02 Score=24.44 Aligned_cols=27 Identities=15% Similarity=0.169 Sum_probs=19.7
Q ss_pred ccccccHHHHHHHHHHcCCEEEEeCcc
Q 021783 73 RQQICDIRKIAEMAHAHGALLLVDNSI 99 (307)
Q Consensus 73 tG~~~~~~~l~~~~~~~~~~li~D~a~ 99 (307)
.|-+....+++++|+++|+.+..-...
T Consensus 268 ~GGit~~~~i~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 268 CGGIHEALKINQICETAGIECMIGCMA 294 (354)
T ss_dssp HTSHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred cCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 355556778888999999888765544
Done!