BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021784
MTSCYSRLTAGSAASHSLLQSPKPSPKAPVSCYLRDHHANQRLPTTLLFRSSKRNYYHNN
SNYKNNNVIYIVASAAAAERSDGHEAAVGDLVDKRKSGERTVEFNVISKSNDRRVEIVIA
AAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLS
MPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL
FGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRL
KVCLVEG

High Scoring Gene Products

Symbol, full name Information P value
CLT1
CRT (chloroquine-resistance transporter)-like transporter 1
protein from Arabidopsis thaliana 8.8e-63
CLT3
CRT (chloroquine-resistance transporter)-like transporter 3
protein from Arabidopsis thaliana 2.7e-61
CLT2
CRT (chloroquine-resistance transporter)-like transporter 2
protein from Arabidopsis thaliana 1.5e-44
crtp1
chloroquine resistance transporter-like protein
gene from Dictyostelium discoideum 6.7e-11
crtp3
chloroquine resistance transporter-like protein
gene from Dictyostelium discoideum 1.2e-10
crtp2
chloroquine resistance transporter-like protein
gene from Dictyostelium discoideum 1.6e-10

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021784
        (307 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2150250 - symbol:CLT1 "CRT (chloroquine-resist...   465  8.8e-63   2
TAIR|locus:2177008 - symbol:CLT3 "CRT (chloroquine-resist...   627  2.7e-61   1
TAIR|locus:2136032 - symbol:CLT2 "CRT (chloroquine-resist...   469  1.5e-44   1
DICTYBASE|DDB_G0276943 - symbol:crtp1 "chloroquine resist...   174  6.7e-11   1
DICTYBASE|DDB_G0270204 - symbol:crtp3 "chloroquine resist...   172  1.2e-10   1
DICTYBASE|DDB_G0277321 - symbol:crtp2 "chloroquine resist...   171  1.6e-10   1


>TAIR|locus:2150250 [details] [associations]
            symbol:CLT1 "CRT (chloroquine-resistance
            transporter)-like transporter 1" species:3702 "Arabidopsis
            thaliana" [GO:0009507 "chloroplast" evidence=ISM] [GO:0002229
            "defense response to oomycetes" evidence=IGI] [GO:0009536 "plastid"
            evidence=IDA] [GO:0034635 "glutathione transport" evidence=IDA]
            [GO:0046686 "response to cadmium ion" evidence=IMP] EMBL:CP002688
            GO:GO:0009536 GO:GO:0046686 GO:GO:0002229 GO:GO:0034635
            IPI:IPI00938852 RefSeq:NP_001154721.1 UniGene:At.31299 PRIDE:F4K139
            EnsemblPlants:AT5G19380.2 GeneID:832058 KEGG:ath:AT5G19380
            OMA:GRRYRIN Uniprot:F4K139
        Length = 507

 Score = 465 (168.7 bits), Expect = 8.8e-63, Sum P(2) = 8.8e-63
 Identities = 93/145 (64%), Positives = 104/145 (71%)

Query:   157 YVAVYFSILYLRYHAGIVTDEMLSMPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILS 216
             YVAVYFSILY RY AGIVT EMLS+PK PF+                   LSG S  +LS
Sbjct:   205 YVAVYFSILYFRYRAGIVTKEMLSVPKLPFLIVGVLESLALAAGMAAASNLSGPSTTVLS 264

Query:   217 QTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMI 276
             QTFLVWQIL SIIFLGRRYR+NQ+ GC LV  GVI++VASGS   HS K  GI WSLLM+
Sbjct:   265 QTFLVWQILFSIIFLGRRYRINQILGCTLVAFGVIVSVASGSGAAHSFKDTGILWSLLMV 324

Query:   277 VSFLLQAADTVLKEVIFLDAAQRLK 301
              SFLLQ ADTV+KEVIFLD+ +RLK
Sbjct:   325 FSFLLQGADTVMKEVIFLDSKKRLK 349

 Score = 194 (73.4 bits), Expect = 8.8e-63, Sum P(2) = 8.8e-63
 Identities = 37/53 (69%), Positives = 45/53 (84%)

Query:   105 NVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGY 157
             + ++  +DR +EIVIAAA T  LGVGNRVLYKLAL+PLK YPFFLAQL+TFG+
Sbjct:    93 HAVAGKDDRTMEIVIAAATTAALGVGNRVLYKLALIPLKQYPFFLAQLSTFGF 145


>TAIR|locus:2177008 [details] [associations]
            symbol:CLT3 "CRT (chloroquine-resistance
            transporter)-like transporter 3" species:3702 "Arabidopsis
            thaliana" [GO:0009507 "chloroplast" evidence=ISM] [GO:0002229
            "defense response to oomycetes" evidence=IGI] [GO:0009536 "plastid"
            evidence=IDA] [GO:0034635 "glutathione transport" evidence=IDA]
            [GO:0046686 "response to cadmium ion" evidence=IMP] EMBL:CP002688
            GO:GO:0009536 GO:GO:0046686 GO:GO:0002229 OMA:EYPFFLA GO:GO:0034635
            EMBL:AY093019 EMBL:AY128939 EMBL:AK176437 IPI:IPI00533991
            RefSeq:NP_001078575.1 UniGene:At.51404 EnsemblPlants:AT5G12170.2
            GeneID:831090 KEGG:ath:AT5G12170 TAIR:At5g12170 PhylomeDB:Q8RWL5
            ProtClustDB:CLSN2689790 Genevestigator:Q8RWL5 Uniprot:Q8RWL5
        Length = 452

 Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
 Identities = 144/301 (47%), Positives = 182/301 (60%)

Query:     1 MTSCYSRLTAGSAASHSLLQSPKPSPKAPVSCYLRDHHANQRLPTTLLFXXXXXXXXXXX 60
             M +   R T G  AS + ++S   +    +S  +R +H + RLP  L+            
Sbjct:     1 MATTSRRFTTGLFASITSVKSHSANRPQSISL-IRRNHIDHRLP--LIVPSSRRWIIQAA 57

Query:    61 XXXXXXXVIYIVASAAAAERSDGHEAAVGDLVDKRKSGERTVEFNVISKSNDRRVEIVIA 120
                      +   + A  ++   +  A+GD  +   S   TV  +VI   + +  EIVI 
Sbjct:    58 RSWDG----FDDGAEAEIKKPGAYGYAIGDN-EIEGSSSSTV--HVIDGEHVKTAEIVIW 110

Query:   121 AAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLS 180
             AAVT   GVGNRV+YKLALVPLK YPFFLAQL+TFGYVAVY++ILY RY AG VTD MLS
Sbjct:   111 AAVTAAFGVGNRVMYKLALVPLKEYPFFLAQLSTFGYVAVYYTILYFRYRAGTVTDAMLS 170

Query:   181 MPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL 240
             +PK+PF+                   LSG S  +LSQTFLVWQI  SIIFLGRRY VNQ+
Sbjct:   171 VPKSPFLIVGILEALAAAAGMAAAANLSGPSTTVLSQTFLVWQIFFSIIFLGRRYSVNQI 230

Query:   241 FGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRL 300
              GC LV +GVI++VASGS   HSL  AG+ W LLM++SFLLQ A TVLKEVIF+D+ +RL
Sbjct:   231 LGCTLVALGVIVSVASGSGAAHSLNEAGVLWILLMVLSFLLQGAGTVLKEVIFIDSQRRL 290

Query:   301 K 301
             K
Sbjct:   291 K 291


>TAIR|locus:2136032 [details] [associations]
            symbol:CLT2 "CRT (chloroquine-resistance
            transporter)-like transporter 2" species:3702 "Arabidopsis
            thaliana" [GO:0009507 "chloroplast" evidence=IDA] [GO:0002229
            "defense response to oomycetes" evidence=IGI] [GO:0009536 "plastid"
            evidence=IDA] [GO:0034635 "glutathione transport" evidence=IDA]
            [GO:0046686 "response to cadmium ion" evidence=IMP] GO:GO:0009507
            GO:GO:0046686 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0002229
            eggNOG:NOG84011 OMA:FQAGASI GO:GO:0034635 EMBL:BT029757
            IPI:IPI00546112 RefSeq:NP_001190820.1 RefSeq:NP_194177.2
            UniGene:At.32342 PRIDE:A1L4X0 EnsemblPlants:AT4G24460.1
            EnsemblPlants:AT4G24460.2 GeneID:828548 KEGG:ath:AT4G24460
            TAIR:At4g24460 HOGENOM:HOG000220923 InParanoid:A1L4X0
            PhylomeDB:A1L4X0 ProtClustDB:CLSN2918181 Genevestigator:A1L4X0
            Uniprot:A1L4X0
        Length = 431

 Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 94/204 (46%), Positives = 128/204 (62%)

Query:    98 GERTVEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGY 157
             G  T E ++ S  N     IV  + V V L V NRVLYKLALVP+K YPFF+AQL TFGY
Sbjct:    79 GASTEESSIPSNRN----LIVANSVVIVALAVANRVLYKLALVPMKQYPFFMAQLTTFGY 134

Query:   158 VAVYFSILYLRYHAGIVTDEMLSMPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILSQ 217
             V +YF+ILY R   GIVT+EM+ +PK  F                   +L G  IPIL+Q
Sbjct:   135 VLIYFTILYTRRRLGIVTNEMMDVPKWRFAIIGFLEALGVATGMAAAAMLPGPVIPILNQ 194

Query:   218 TFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIV 277
             T+LVWQ+L +++ LGRR+ +NQ+ GC LV +GV++ V+SGS    +L G G  W  +++ 
Sbjct:   195 TYLVWQLLFALLILGRRFLLNQIAGCLLVAVGVVVAVSSGSGADTTLSGIGFLWPAVLVA 254

Query:   278 SFLLQAADTVLKEVIFLDAAQRLK 301
             S   QA  +++KE +F DAA+RL+
Sbjct:   255 SAAFQAGASIIKEFVFNDAAKRLE 278


>DICTYBASE|DDB_G0276943 [details] [associations]
            symbol:crtp1 "chloroquine resistance transporter-like
            protein" species:44689 "Dictyostelium discoideum" [GO:0012506
            "vesicle membrane" evidence=IDA] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
            evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            dictyBase:DDB_G0276943 Pfam:PF03151 GO:GO:0016021
            GenomeReviews:CM000151_GR GO:GO:0030659 GO:GO:0012506
            EMBL:AAFI02000019 EMBL:AF317500 RefSeq:XP_642959.1 PRIDE:Q9GSB0
            EnsemblProtists:DDB0185065 GeneID:8620828 KEGG:ddi:DDB_G0276943
            eggNOG:NOG84011 InParanoid:Q9GSB0 OMA:EYPFFLA
            ProtClustDB:CLSZ2429181 InterPro:IPR013936 InterPro:IPR004853
            InterPro:IPR009262 InterPro:IPR017258 PANTHER:PTHR14233
            Pfam:PF08627 PIRSF:PIRSF037671 Uniprot:Q9GSB0
        Length = 473

 Score = 174 (66.3 bits), Expect = 6.7e-11, P = 6.7e-11
 Identities = 53/190 (27%), Positives = 83/190 (43%)

Query:   105 NVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSI 164
             N +SK     + I+I   + V  GV N VL K  +    +Y FFL+QL  FGYV ++ ++
Sbjct:    43 NSMSKET---ITILIYVVLYVTSGVINSVLLKKVMNKFTNYAFFLSQLTNFGYVPIFGAV 99

Query:   165 L-YLRYHAGIVTDEMLSMPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILSQTFLVWQ 223
               Y  +    +  E    P   F                     SG    +L+Q  + + 
Sbjct:   100 TAYKIFFTKDIPQETRDFPTRKFAIMGALDAITGFFVVIGGVSTSGPLQQLLNQAIIPFT 159

Query:   224 ILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQA 283
             ++ S IFL  RY + QL G  ++ IG ++T    S  G S  G   FW+   ++S +  A
Sbjct:   160 MIASFIFLKERYSLIQLGGALVI-IGGVVTSLIPSLLGGSSGGNKPFWNFFYLLSVIPGA 218

Query:   284 ADTVLKEVIF 293
                V K++ F
Sbjct:   219 LSNVYKDIGF 228


>DICTYBASE|DDB_G0270204 [details] [associations]
            symbol:crtp3 "chloroquine resistance transporter-like
            protein" species:44689 "Dictyostelium discoideum" [GO:0008150
            "biological_process" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
            evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            dictyBase:DDB_G0270204 GO:GO:0016021 EMBL:AAFI02000005
            GenomeReviews:CM000150_GR GO:GO:0030659 eggNOG:NOG84011
            ProtClustDB:CLSZ2429181 InterPro:IPR013936 InterPro:IPR009262
            InterPro:IPR017258 PANTHER:PTHR14233 Pfam:PF08627 PIRSF:PIRSF037671
            RefSeq:XP_646615.1 EnsemblProtists:DDB0232252 GeneID:8617587
            KEGG:ddi:DDB_G0270204 InParanoid:Q55C66 OMA:FQAGASI Uniprot:Q55C66
        Length = 478

 Score = 172 (65.6 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 50/189 (26%), Positives = 90/189 (47%)

Query:   107 ISKSNDRR-VEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYF-SI 164
             + KS  +  + I+I   + ++ GV N VL K  ++   +Y FFL+Q+  +GY+ ++  ++
Sbjct:    44 LKKSMTKETLPILIYVLLYIISGVINVVLLKKLMIKFVNYGFFLSQITNYGYLPIFLVAM 103

Query:   165 LYLRYHAGIVTDEMLSMPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILSQTFLVWQI 224
              Y  Y    V  E  + P+  FV                    SG    +L+Q  + + +
Sbjct:   104 WYKMYCTSDVPKETRNFPQYKFVIMGLLDAINGFFVVIGGVSTSGPLQQLLNQAIIPFTM 163

Query:   225 LLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAA 284
             + S IFL  RY + QL G  ++  GVI+++   S  G S  G  +F++   ++S +  A 
Sbjct:   164 IASFIFLRERYSLFQLGGAAVILGGVIVSLIP-SLVGGSSGGNILFYNFFYLISVIPGAL 222

Query:   285 DTVLKEVIF 293
               V K++ F
Sbjct:   223 SNVYKDIAF 231


>DICTYBASE|DDB_G0277321 [details] [associations]
            symbol:crtp2 "chloroquine resistance transporter-like
            protein" species:44689 "Dictyostelium discoideum" [GO:0008150
            "biological_process" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
            evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            dictyBase:DDB_G0277321 GO:GO:0016021 GenomeReviews:CM000151_GR
            GO:GO:0030659 EMBL:AAFI02000019 eggNOG:NOG84011
            ProtClustDB:CLSZ2429181 InterPro:IPR013936 InterPro:IPR009262
            InterPro:IPR017258 PANTHER:PTHR14233 Pfam:PF08627 PIRSF:PIRSF037671
            RefSeq:XP_642710.1 PRIDE:Q550A6 EnsemblProtists:DDB0232251
            GeneID:8620902 KEGG:ddi:DDB_G0277321 InParanoid:Q550A6 OMA:ITLNMAF
            Uniprot:Q550A6
        Length = 484

 Score = 171 (65.3 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 50/190 (26%), Positives = 88/190 (46%)

Query:   105 NVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSI 164
             N ISK       +++   + +L GV N +L K  +    +Y FFL QL  +GYV ++ +I
Sbjct:    51 NSISKQT---ATVLVYVVLYILSGVINSLLLKKVMNVFTNYGFFLNQLTNYGYVPIFGAI 107

Query:   165 -LYLRYHAGIVTDEMLSMPKAPFVXXXXXXXXXXXXXXXXXXILSGASIPILSQTFLVWQ 223
              LY       +  +  S P+  FV                    +G    +L+Q+ + + 
Sbjct:   108 VLYKILFTNDIPKDTRSFPQWKFVIMGALDAVTGYFVVIGGIKTTGPLQQLLNQSVIPFT 167

Query:   224 ILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQA 283
             +LLS IFL  RY + QL G  ++  GV++++      G++  G  +F++   ++S +  A
Sbjct:   168 MLLSFIFLKERYSLIQLGGALIIIGGVVVSLIPSLTGGNT-SGNMLFYNFFYLISMIPYA 226

Query:   284 ADTVLKEVIF 293
                V K + F
Sbjct:   227 FSNVYKAIGF 236


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.139   0.406    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      307       271   0.00098  114 3  11 22  0.40    33
                                                     32  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  593 (63 KB)
  Total size of DFA:  174 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.87u 0.18s 19.05t   Elapsed:  00:00:01
  Total cpu time:  18.87u 0.18s 19.05t   Elapsed:  00:00:01
  Start:  Fri May 10 12:07:35 2013   End:  Fri May 10 12:07:36 2013

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