Query 021784
Match_columns 307
No_of_seqs 141 out of 207
Neff 4.9
Searched_HMMs 46136
Date Fri Mar 29 05:39:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021784.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021784hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06027 DUF914: Eukaryotic pr 100.0 7.2E-29 1.6E-33 239.2 12.8 169 128-298 26-196 (334)
2 KOG2766 Predicted membrane pro 99.9 5.3E-26 1.2E-30 212.2 -1.2 169 124-299 26-195 (336)
3 KOG3912 Predicted integral mem 99.8 7.8E-20 1.7E-24 172.9 12.8 179 119-297 6-203 (372)
4 PF08627 CRT-like: CRT-like; 99.8 8.1E-20 1.8E-24 154.1 6.3 82 107-188 48-130 (130)
5 PF08449 UAA: UAA transporter 99.6 1.9E-15 4.1E-20 142.1 12.4 172 123-299 7-183 (303)
6 PF04142 Nuc_sug_transp: Nucle 99.5 9.8E-15 2.1E-19 135.3 7.9 115 184-298 18-142 (244)
7 PTZ00343 triose or hexose phos 99.2 3.4E-10 7.3E-15 109.4 14.0 177 111-297 44-221 (350)
8 TIGR00817 tpt Tpt phosphate/ph 99.1 1.5E-09 3.2E-14 101.5 12.0 168 116-294 2-169 (302)
9 KOG2234 Predicted UDP-galactos 98.9 1.6E-08 3.4E-13 98.6 12.1 114 184-297 93-210 (345)
10 PLN00411 nodulin MtN21 family 98.6 2.1E-07 4.6E-12 90.9 11.4 182 112-296 9-215 (358)
11 KOG1581 UDP-galactose transpor 98.5 1.3E-06 2.8E-11 84.2 13.3 182 111-297 9-199 (327)
12 PF13536 EmrE: Multidrug resis 98.5 7.8E-08 1.7E-12 78.4 3.4 99 160-259 11-110 (113)
13 COG0697 RhaT Permeases of the 98.4 4.5E-06 9.7E-11 74.9 12.6 166 119-293 10-177 (292)
14 KOG1583 UDP-N-acetylglucosamin 98.4 3.4E-07 7.3E-12 87.5 4.9 177 119-301 5-195 (330)
15 KOG1441 Glucose-6-phosphate/ph 98.4 3.9E-06 8.5E-11 81.3 11.9 174 112-296 13-189 (316)
16 TIGR00950 2A78 Carboxylate/Ami 98.3 4.4E-06 9.6E-11 75.4 10.1 107 184-296 47-154 (260)
17 PRK11453 O-acetylserine/cystei 98.2 2.3E-05 5E-10 73.6 12.6 105 186-294 61-167 (299)
18 PRK11689 aromatic amino acid e 98.2 2.5E-05 5.4E-10 73.3 12.7 163 121-294 9-180 (295)
19 TIGR03340 phn_DUF6 phosphonate 98.1 1.7E-05 3.8E-10 73.7 9.9 102 184-291 63-165 (281)
20 PF00892 EamA: EamA-like trans 98.1 6.2E-06 1.4E-10 65.2 5.0 69 185-253 55-124 (126)
21 PRK15430 putative chlorampheni 98.0 2.6E-05 5.7E-10 73.2 9.5 92 190-292 80-171 (296)
22 TIGR00688 rarD rarD protein. T 98.0 3.6E-05 7.8E-10 70.3 10.1 96 186-292 73-168 (256)
23 PRK11272 putative DMT superfam 98.0 7.2E-05 1.6E-09 70.0 11.8 164 115-292 7-172 (292)
24 KOG2765 Predicted membrane pro 97.8 5.5E-05 1.2E-09 74.9 8.2 103 188-290 164-267 (416)
25 KOG1582 UDP-galactose transpor 97.5 0.00013 2.8E-09 70.1 4.9 173 115-296 42-216 (367)
26 COG2510 Predicted membrane pro 97.4 0.001 2.3E-08 57.5 9.4 132 119-254 6-138 (140)
27 PRK10532 threonine and homoser 97.2 0.006 1.3E-07 57.2 13.1 161 115-294 12-172 (293)
28 KOG4510 Permease of the drug/m 97.2 0.00033 7.2E-09 67.3 4.3 108 183-290 96-211 (346)
29 PF05653 Mg_trans_NIPA: Magnes 97.2 0.00024 5.2E-09 68.2 3.4 75 185-259 51-126 (300)
30 TIGR00950 2A78 Carboxylate/Ami 97.1 0.0048 1E-07 55.7 10.9 65 186-250 194-259 (260)
31 TIGR00776 RhaT RhaT L-rhamnose 97.1 0.0066 1.4E-07 57.4 12.3 103 189-291 65-173 (290)
32 PF03151 TPT: Triose-phosphate 97.0 0.0044 9.4E-08 51.7 8.5 69 184-252 82-150 (153)
33 KOG1443 Predicted integral mem 96.7 0.0089 1.9E-07 58.4 9.4 171 117-297 17-191 (349)
34 KOG1580 UDP-galactose transpor 96.7 0.0018 4E-08 61.4 4.3 120 178-297 80-199 (337)
35 PF08449 UAA: UAA transporter 96.7 0.0059 1.3E-07 57.7 7.6 136 116-253 155-295 (303)
36 TIGR00803 nst UDP-galactose tr 96.6 0.0047 1E-07 55.5 5.9 108 188-296 4-111 (222)
37 TIGR03340 phn_DUF6 phosphonate 96.4 0.0056 1.2E-07 56.9 5.4 64 189-252 217-280 (281)
38 KOG1442 GDP-fucose transporter 96.0 0.038 8.3E-07 53.6 8.8 84 204-291 123-206 (347)
39 PRK15051 4-amino-4-deoxy-L-ara 95.9 0.0086 1.9E-07 49.5 3.8 64 191-254 45-108 (111)
40 KOG2922 Uncharacterized conser 95.8 0.016 3.6E-07 56.7 5.8 71 187-257 67-138 (335)
41 KOG1444 Nucleotide-sugar trans 95.8 0.089 1.9E-06 51.4 10.7 171 113-295 9-182 (314)
42 PRK10532 threonine and homoser 95.7 0.053 1.1E-06 50.9 8.8 70 187-256 212-282 (293)
43 PRK11689 aromatic amino acid e 95.6 0.031 6.7E-07 52.5 6.6 71 186-256 218-288 (295)
44 PLN00411 nodulin MtN21 family 95.3 0.057 1.2E-06 53.1 7.4 68 189-256 262-329 (358)
45 COG0697 RhaT Permeases of the 95.2 0.08 1.7E-06 47.4 7.6 70 185-254 216-286 (292)
46 TIGR00803 nst UDP-galactose tr 94.9 0.13 2.7E-06 46.3 8.1 67 186-252 155-221 (222)
47 PTZ00343 triose or hexose phos 94.7 0.12 2.6E-06 50.2 7.8 63 190-252 279-345 (350)
48 PRK02971 4-amino-4-deoxy-L-ara 94.3 0.17 3.7E-06 43.1 7.1 116 119-256 5-123 (129)
49 KOG4314 Predicted carbohydrate 94.3 0.13 2.8E-06 48.1 6.6 93 194-291 64-156 (290)
50 PRK15430 putative chlorampheni 94.2 0.019 4.1E-07 54.0 1.1 72 186-257 216-287 (296)
51 TIGR00776 RhaT RhaT L-rhamnose 93.7 0.046 1E-06 51.7 2.7 72 184-255 212-288 (290)
52 PF10639 UPF0546: Uncharacteri 93.6 0.079 1.7E-06 44.6 3.6 71 184-254 42-113 (113)
53 PRK11272 putative DMT superfam 93.3 0.058 1.2E-06 50.6 2.6 68 186-253 215-283 (292)
54 TIGR00817 tpt Tpt phosphate/ph 92.7 0.19 4.1E-06 47.1 5.1 57 198-254 236-292 (302)
55 PRK10452 multidrug efflux syst 92.4 0.1 2.2E-06 44.2 2.6 73 184-256 31-104 (120)
56 PRK11453 O-acetylserine/cystei 91.6 0.9 2E-05 42.7 8.3 71 186-256 217-288 (299)
57 PF06800 Sugar_transport: Suga 89.5 0.98 2.1E-05 43.3 6.5 70 183-252 195-268 (269)
58 PF04142 Nuc_sug_transp: Nucle 89.0 3.4 7.4E-05 38.6 9.7 131 113-246 112-244 (244)
59 KOG4314 Predicted carbohydrate 87.9 1.9 4.2E-05 40.5 7.1 149 108-257 127-278 (290)
60 PRK10650 multidrug efflux syst 87.5 0.71 1.5E-05 38.5 3.7 69 185-253 37-106 (109)
61 PF06027 DUF914: Eukaryotic pr 87.1 3.1 6.7E-05 41.0 8.5 58 199-256 249-306 (334)
62 PRK09541 emrE multidrug efflux 87.1 0.52 1.1E-05 39.2 2.6 65 192-256 39-104 (110)
63 KOG2765 Predicted membrane pro 85.7 5.3 0.00011 40.4 9.3 82 176-257 306-392 (416)
64 PF12398 DUF3660: Receptor ser 82.9 0.85 1.8E-05 32.3 1.7 30 33-62 3-32 (42)
65 PF15169 DUF4564: Domain of un 82.5 1.3 2.8E-05 40.5 3.2 60 231-299 15-77 (187)
66 PRK11431 multidrug efflux syst 81.0 1.3 2.9E-05 36.6 2.5 67 187-253 33-100 (105)
67 PF06570 DUF1129: Protein of u 78.4 10 0.00022 34.3 7.7 56 182-237 145-203 (206)
68 PF00893 Multi_Drug_Res: Small 77.8 3.9 8.4E-05 32.6 4.2 61 186-246 32-93 (93)
69 COG2076 EmrE Membrane transpor 77.2 2.6 5.6E-05 35.3 3.1 70 184-253 31-101 (106)
70 PF04657 DUF606: Protein of un 75.3 14 0.0003 31.7 7.3 72 177-252 59-138 (138)
71 PF02694 UPF0060: Uncharacteri 73.2 3.6 7.8E-05 34.6 3.0 48 209-256 57-104 (107)
72 KOG1581 UDP-galactose transpor 71.1 20 0.00044 35.4 8.0 69 184-252 242-310 (327)
73 KOG1580 UDP-galactose transpor 70.7 1.9 4.1E-05 41.4 1.0 74 184-257 242-315 (337)
74 PRK13499 rhamnose-proton sympo 69.1 9.4 0.0002 37.9 5.4 100 187-286 77-190 (345)
75 COG1742 Uncharacterized conser 62.4 6.5 0.00014 33.1 2.4 48 209-256 58-105 (109)
76 KOG1441 Glucose-6-phosphate/ph 61.8 4.8 0.0001 39.5 1.8 68 185-252 234-304 (316)
77 COG5070 VRG4 Nucleotide-sugar 61.2 24 0.00053 33.9 6.3 157 121-283 11-171 (309)
78 PF06800 Sugar_transport: Suga 60.2 38 0.00082 32.6 7.5 106 185-290 47-158 (269)
79 KOG1442 GDP-fucose transporter 58.0 22 0.00048 35.0 5.5 118 128-249 197-321 (347)
80 PF04973 NMN_transporter: Nico 55.3 66 0.0014 28.3 7.8 106 127-233 28-133 (181)
81 KOG4831 Unnamed protein [Funct 54.9 10 0.00022 32.3 2.3 72 183-254 52-124 (125)
82 PRK02237 hypothetical protein; 52.0 6.1 0.00013 33.3 0.6 47 209-255 59-105 (109)
83 PRK13499 rhamnose-proton sympo 48.2 1.1E+02 0.0023 30.6 8.7 67 187-254 264-340 (345)
84 COG4858 Uncharacterized membra 47.9 1E+02 0.0022 28.9 7.8 62 178-239 156-220 (226)
85 KOG4510 Permease of the drug/m 47.4 16 0.00034 35.9 2.7 68 183-250 253-320 (346)
86 KOG2234 Predicted UDP-galactos 44.5 1.2E+02 0.0025 30.5 8.3 139 112-254 180-321 (345)
87 PF02554 CstA: Carbon starvati 41.1 2.1E+02 0.0046 29.0 9.6 50 227-276 233-293 (376)
88 COG0805 TatC Sec-independent p 40.4 2.1E+02 0.0046 27.4 9.1 95 108-211 102-216 (255)
89 COG2962 RarD Predicted permeas 40.1 31 0.00066 33.8 3.4 78 178-255 65-144 (293)
90 PF07857 DUF1632: CEO family ( 34.2 1.4E+02 0.003 28.6 6.8 121 184-305 55-217 (254)
91 COG5006 rhtA Threonine/homoser 31.4 34 0.00075 33.2 2.2 55 197-251 224-278 (292)
92 KOG1582 UDP-galactose transpor 26.1 43 0.00093 33.1 1.9 76 184-259 257-336 (367)
93 COG1113 AnsP Gamma-aminobutyra 25.9 6.1E+02 0.013 26.6 10.2 44 117-167 339-382 (462)
94 COG1966 CstA Carbon starvation 25.8 5.5E+02 0.012 27.6 9.9 39 113-151 126-164 (575)
95 TIGR01528 NMN_trans_PnuC nicot 25.0 83 0.0018 28.3 3.4 24 211-234 114-137 (189)
96 KOG1583 UDP-N-acetylglucosamin 23.9 1.1E+02 0.0024 30.3 4.2 32 222-253 281-312 (330)
97 PF05875 Ceramidase: Ceramidas 23.6 2.9E+02 0.0062 25.7 6.9 51 206-256 75-129 (262)
98 PF09656 PGPGW: Putative trans 22.1 57 0.0012 24.1 1.5 20 238-257 4-23 (53)
No 1
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=7.2e-29 Score=239.19 Aligned_cols=169 Identities=25% Similarity=0.259 Sum_probs=146.3
Q ss_pred hhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHHHHHHHHhhhccc
Q 021784 128 GVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAIL 207 (307)
Q Consensus 128 Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk~kfli~GllDal~~~L~viA~~yt 207 (307)
..+|.....+... -.|.|.|++.++.+....+|.+++++|+..+... ++...|+|+|+++|++|+++|++.++|++||
T Consensus 26 ~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~-~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yT 103 (334)
T PF06027_consen 26 TGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWL-KVLKRPWWKYFLLALLDVEANYLVVLAYQYT 103 (334)
T ss_pred HhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccch-hhcchhHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3445555555444 7799999998888888889998888886654433 4567889999999999999999999999999
Q ss_pred cccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCC--CCCCcchHHHHHHHHHhhHHHHH
Q 021784 208 SGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH--SLKGAGIFWSLLMIVSFLLQAAD 285 (307)
Q Consensus 208 sgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~--s~~~~~vlw~lL~llS~ip~AlS 285 (307)
+.++.|+|+|+.|||+|++|++|||+||++.|++|+++|++|+++++.+|..+++ ..+++.++||+++++|+++||++
T Consensus 104 svtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~ 183 (334)
T PF06027_consen 104 SVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVS 183 (334)
T ss_pred cHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998754332 24688999999999999999999
Q ss_pred HHHHHHhhhhhhh
Q 021784 286 TVLKEVIFLDAAQ 298 (307)
Q Consensus 286 nV~kE~~fkd~~~ 298 (307)
||+||+.+||+.+
T Consensus 184 nV~~E~~v~~~~~ 196 (334)
T PF06027_consen 184 NVLEEKLVKKAPR 196 (334)
T ss_pred HHHHHHhcccCCH
Confidence 9999999998764
No 2
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.91 E-value=5.3e-26 Score=212.24 Aligned_cols=169 Identities=20% Similarity=0.174 Sum_probs=147.4
Q ss_pred HHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHHHHHHHHhh
Q 021784 124 TVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAA 203 (307)
Q Consensus 124 ~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk~kfli~GllDal~~~L~viA 203 (307)
+=++.++|....-.+..+--|-|-+++.+......++|.+++.+|.. .....|++|+++|+.|+++|++++.|
T Consensus 26 LSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~-------~~~~~~~hYilla~~DVEaNy~vV~A 98 (336)
T KOG2766|consen 26 LSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRK-------YIKAKWRHYILLAFVDVEANYFVVKA 98 (336)
T ss_pred HHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhH-------HHHHHHHHhhheeEEeecccEEEeee
Confidence 33445666666667777778999998888888888999999988741 23345678999999999999999999
Q ss_pred hccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCC-CCCCcchHHHHHHHHHhhHH
Q 021784 204 GAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH-SLKGAGIFWSLLMIVSFLLQ 282 (307)
Q Consensus 204 ~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~-s~~~~~vlw~lL~llS~ip~ 282 (307)
++||+.++.++|+||.||+.+++||+|||.||++.|+.|+++|++|++++++||-.+|+ +.++|++.||.++++|+.+|
T Consensus 99 yQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlY 178 (336)
T KOG2766|consen 99 YQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLY 178 (336)
T ss_pred hhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceee
Confidence 99999999999999999999999999999999999999999999999999999765544 35789999999999999999
Q ss_pred HHHHHHHHHhhhhhhhh
Q 021784 283 AADTVLKEVIFLDAAQR 299 (307)
Q Consensus 283 AlSnV~kE~~fkd~~~~ 299 (307)
|+|||.||++.|+..+.
T Consensus 179 aVSNv~EEflvkn~d~~ 195 (336)
T KOG2766|consen 179 AVSNVSEEFLVKNADRV 195 (336)
T ss_pred eeccccHHHHHhcCcHH
Confidence 99999999999987653
No 3
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.82 E-value=7.8e-20 Score=172.90 Aligned_cols=179 Identities=20% Similarity=0.213 Sum_probs=143.6
Q ss_pred HHHHHHHHhhhhhHHHHHHHhC------CCCChhHHHHHHhh---hhhHHHHHHHHHHHHhcCccc-----hhhh--cCC
Q 021784 119 IAAAVTVLLGVGNRVLYKLALV------PLKHYPFFLAQLAT---FGYVAVYFSILYLRYHAGIVT-----DEML--SMP 182 (307)
Q Consensus 119 i~~i~~Vi~Gv~N~Vl~Kl~~~------~~~nYp~Fl~q~~t---~~yv~vyf~Il~~r~~~~~it-----~eml--~~P 182 (307)
++.+.||+.|+.|+++.|-+.+ |.+++|+.++..+. |.|+.+|+.+-...-+.+... ..+. .|.
T Consensus 6 ~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~ 85 (372)
T KOG3912|consen 6 FLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN 85 (372)
T ss_pred hhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC
Confidence 4568899999999999999876 66799988888665 455555543321111222222 1122 344
Q ss_pred CccchHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCC---
Q 021784 183 KAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSN--- 259 (307)
Q Consensus 183 k~kfli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~--- 259 (307)
+.-|+.+++||++|+.++..|+.+|+.+++||++++.|.|+-++|..||+++.+..||+|.+.+..|+++++.++-.
T Consensus 86 p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~ 165 (372)
T KOG3912|consen 86 PVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVT 165 (372)
T ss_pred cceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccccc
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999988432
Q ss_pred CCCCCCCcchHHHHHHHHHhhHHHHHHHHHHHhhhhhh
Q 021784 260 PGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAA 297 (307)
Q Consensus 260 ~g~s~~~~~vlw~lL~llS~ip~AlSnV~kE~~fkd~~ 297 (307)
..-.+.++.+.|++++++++++-|+|.|+|||.+++++
T Consensus 166 ~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~n 203 (372)
T KOG3912|consen 166 DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSN 203 (372)
T ss_pred CCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 11123477899999999999999999999999998764
No 4
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=99.79 E-value=8.1e-20 Score=154.08 Aligned_cols=82 Identities=40% Similarity=0.725 Sum_probs=77.0
Q ss_pred cccccccchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHH-HHhcCccchhhhcCCCcc
Q 021784 107 ISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYL-RYHAGIVTDEMLSMPKAP 185 (307)
Q Consensus 107 ~~~~~~~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~-r~~~~~it~eml~~Pk~k 185 (307)
..+-.+++++++++++++|+.|+.|+|++|+++++|.||+||++|+++++|+++||+++++ +|+.+.||+||++||+||
T Consensus 48 k~s~~ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlTt~gyvpIffaV~lyk~y~t~~It~Emr~FPkyK 127 (130)
T PF08627_consen 48 KQSYSKENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLTTFGYVPIFFAVVLYKMYFTGDITKEMRAFPKYK 127 (130)
T ss_pred HHhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhcccceehHHHHHHHHHHHHcCCCCHHHHhCcccc
Confidence 4456689999999999999999999999999999999999999999999999999999876 599999999999999999
Q ss_pred chH
Q 021784 186 FVA 188 (307)
Q Consensus 186 fli 188 (307)
|++
T Consensus 128 FaI 130 (130)
T PF08627_consen 128 FAI 130 (130)
T ss_pred ccC
Confidence 985
No 5
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.63 E-value=1.9e-15 Score=142.11 Aligned_cols=172 Identities=22% Similarity=0.255 Sum_probs=134.7
Q ss_pred HHHHhhhhhHHHHHHHhC-CCCC-hhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHHHHHHH
Q 021784 123 VTVLLGVGNRVLYKLALV-PLKH-YPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATG 200 (307)
Q Consensus 123 ~~Vi~Gv~N~Vl~Kl~~~-~~~n-Yp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk~kfli~GllDal~~~L~ 200 (307)
+.......|-++...... +.++ ||.|++.++...+..+.+....... .++....|.++|++++++++.+..+.
T Consensus 7 ~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (303)
T PF08449_consen 7 GIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-----FPKSRKIPLKKYAILSFLFFLASVLS 81 (303)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-----ccCCCcChHHHHHHHHHHHHHHHHHH
Confidence 333334445555544444 4445 8999999887766655544332221 23346677789999999999999999
Q ss_pred HhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCCC---CCCcchHHHHHHHH
Q 021784 201 MAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHS---LKGAGIFWSLLMIV 277 (307)
Q Consensus 201 viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s---~~~~~vlw~lL~ll 277 (307)
..|..|+|.+.+++++.+.++++|+++++++||||+..||++++++++|+++...++..+.+. ...+...|.+++++
T Consensus 82 ~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~ 161 (303)
T PF08449_consen 82 NAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLL 161 (303)
T ss_pred HHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999876433221 22233459999999
Q ss_pred HhhHHHHHHHHHHHhhhhhhhh
Q 021784 278 SFLLQAADTVLKEVIFLDAAQR 299 (307)
Q Consensus 278 S~ip~AlSnV~kE~~fkd~~~~ 299 (307)
|.+++|+.+++||++++++.+.
T Consensus 162 sl~~~a~~~~~qe~~~~~~~~~ 183 (303)
T PF08449_consen 162 SLLLDAFTGVYQEKLFKKYGKS 183 (303)
T ss_pred HHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999999999999988654
No 6
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.55 E-value=9.8e-15 Score=135.30 Aligned_cols=115 Identities=22% Similarity=0.284 Sum_probs=102.6
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCC--
Q 021784 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPG-- 261 (307)
Q Consensus 184 ~kfli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g-- 261 (307)
+++++|+++|++.|.+.+.|+.+++++.+|+++|+-|++|.++|+++||||.+..||++.++.++|++++...+....
T Consensus 18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~ 97 (244)
T PF04142_consen 18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDN 97 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccccc
Confidence 689999999999999999999999999999999999999999999999999999999999999999999888643221
Q ss_pred ---CC-----CCCcchHHHHHHHHHhhHHHHHHHHHHHhhhhhhh
Q 021784 262 ---HS-----LKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQ 298 (307)
Q Consensus 262 ---~s-----~~~~~vlw~lL~llS~ip~AlSnV~kE~~fkd~~~ 298 (307)
.. ...+.+.|.+++++++++.|++.||+|+++|+...
T Consensus 98 ~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~ 142 (244)
T PF04142_consen 98 SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNV 142 (244)
T ss_pred ccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccch
Confidence 00 13456788999999999999999999999998753
No 7
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.18 E-value=3.4e-10 Score=109.38 Aligned_cols=177 Identities=14% Similarity=0.081 Sum_probs=135.4
Q ss_pred cccchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhc-CccchhhhcCCCccchHh
Q 021784 111 NDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHA-GIVTDEMLSMPKAPFVAV 189 (307)
Q Consensus 111 ~~~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~-~~it~eml~~Pk~kfli~ 189 (307)
...++++.+++++.-.+...-.+..|..++. .+||++++.++...-.++.......+++. .++. .....+++.+.+
T Consensus 44 ~~~~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~llp~ 120 (350)
T PTZ00343 44 PNFKWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK--SLKLFLKNFLPQ 120 (350)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHHH
Confidence 3568999999988888888889999998887 47999999987533222111111111111 0110 011123467889
Q ss_pred hHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCCCCCCcch
Q 021784 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI 269 (307)
Q Consensus 190 GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s~~~~~v 269 (307)
|+|-.......++|..+++.+..+++.....+++++++++++|+|+++.+++|++++++|++++...+ .+..+
T Consensus 121 gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~-------~~~~~ 193 (350)
T PTZ00343 121 GLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKE-------LHFTW 193 (350)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheeccc-------chhHH
Confidence 99998888888899999999999999999999999999999999999999999999999999976421 12247
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHhhhhhh
Q 021784 270 FWSLLMIVSFLLQAADTVLKEVIFLDAA 297 (307)
Q Consensus 270 lw~lL~llS~ip~AlSnV~kE~~fkd~~ 297 (307)
.|.++.++|.+..|+.+++-++..++..
T Consensus 194 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~ 221 (350)
T PTZ00343 194 LAFWCAMLSNLGSSLRSIFAKKTMKNKS 221 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 7999999999999999999999876543
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.06 E-value=1.5e-09 Score=101.49 Aligned_cols=168 Identities=11% Similarity=0.068 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHH
Q 021784 116 EIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEAL 195 (307)
Q Consensus 116 ~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk~kfli~GllDal 195 (307)
+...+++..-.+...-+++.|...+. .+||.+++.++...-.++... .++....+. ++.....+++++.+|++-+.
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~-~~~P~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~ 77 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNV-FPYPYFKTLISLAVGSLYCLL--SWSSGLPKR-LKISSALLKLLLPVAIVHTI 77 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-CChhHHHHHHHHHHHHHHHHH--HHHhCCCCC-CCCCHHHHHHHHHHHHHHHH
Confidence 44566777777888888999998874 699999888764322211111 121111000 00011123457889999999
Q ss_pred HHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCCCCCCcchHHHHHH
Q 021784 196 AAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLM 275 (307)
Q Consensus 196 ~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s~~~~~vlw~lL~ 275 (307)
...+.+.|..|++.+..+++.....+++++++++++|+|++..+++|++++++|+++... .+ .+....|+++.
T Consensus 78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~--~~-----~~~~~~G~~~~ 150 (302)
T TIGR00817 78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASD--TE-----LSFNWAGFLSA 150 (302)
T ss_pred HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcC--Cc-----ccccHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999976431 11 13346799999
Q ss_pred HHHhhHHHHHHHHHHHhhh
Q 021784 276 IVSFLLQAADTVLKEVIFL 294 (307)
Q Consensus 276 llS~ip~AlSnV~kE~~fk 294 (307)
++|.+..|+.+++.++..+
T Consensus 151 l~a~~~~a~~~v~~k~~~~ 169 (302)
T TIGR00817 151 MISNITFVSRNIFSKKAMT 169 (302)
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999999887655
No 9
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=98.89 E-value=1.6e-08 Score=98.55 Aligned_cols=114 Identities=18% Similarity=0.146 Sum_probs=102.4
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeec---CCCC
Q 021784 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS---GSNP 260 (307)
Q Consensus 184 ~kfli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~s---gs~~ 260 (307)
.|..+++++-++.|.+.++++.|.++..+|+..|.-|..|.+++.++|+||.+..||...++-++|+.++-.+ +.++
T Consensus 93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a 172 (345)
T KOG2234|consen 93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGA 172 (345)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence 5899999999999999999999999999999999999999999999999999999999999999999988844 2222
Q ss_pred C-CCCCCcchHHHHHHHHHhhHHHHHHHHHHHhhhhhh
Q 021784 261 G-HSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAA 297 (307)
Q Consensus 261 g-~s~~~~~vlw~lL~llS~ip~AlSnV~kE~~fkd~~ 297 (307)
. .....|.+.|-...+.+|...+++.||=|+++|+.+
T Consensus 173 ~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~ 210 (345)
T KOG2234|consen 173 KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSN 210 (345)
T ss_pred cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1 234578899999999999999999999999998754
No 10
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.64 E-value=2.1e-07 Score=90.93 Aligned_cols=182 Identities=18% Similarity=0.207 Sum_probs=120.8
Q ss_pred ccchHHHHHHHHHHHhhhhhHHHHHHHhCC-CCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCCccchHhh
Q 021784 112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVP-LKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVG 190 (307)
Q Consensus 112 ~~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~-~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk~kfli~G 190 (307)
+|..+..+.++++=+.-....++.|...+. +..++ + .-+-...=.++.+++.+.+.+....++... -.+.+++++|
T Consensus 9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~-~-~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~-~~~~~l~l~g 85 (358)
T PLN00411 9 RREAVFLTAMLATETSVVGISTLFKVATSKGLNIYP-F-LGYSYLLASLLLLPSLFFTNRSRSLPPLSV-SILSKIGLLG 85 (358)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccH-H-HHHHHHHHHHHHHHHHHHHHHhcccCcchH-HHHHHHHHHH
Confidence 345666677777777777788888888864 33444 2 211111101112222233221111111000 0113567788
Q ss_pred HHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHH------hcccccccccchhhheeeceeeEeecCCCC----
Q 021784 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIF------LGRRYRVNQLFGCFLVGIGVIITVASGSNP---- 260 (307)
Q Consensus 191 llDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~if------Lk~RY~~~qi~G~~IVl~Glivvv~sgs~~---- 260 (307)
++-...+.+.+.|.+||+.....++......|+++++++| +|+|.+..|++|.+++++|+.++...+...
T Consensus 86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~ 165 (358)
T PLN00411 86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVA 165 (358)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 8776666788999999999999999999999999999999 699999999999999999998766432100
Q ss_pred --------------CCCCCCcchHHHHHHHHHhhHHHHHHHHHHHhhhhh
Q 021784 261 --------------GHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDA 296 (307)
Q Consensus 261 --------------g~s~~~~~vlw~lL~llS~ip~AlSnV~kE~~fkd~ 296 (307)
.....++.++++++.++|++..|+.+++..+..+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~ 215 (358)
T PLN00411 166 SSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY 215 (358)
T ss_pred cccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 001112236689999999999999999998876665
No 11
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.54 E-value=1.3e-06 Score=84.16 Aligned_cols=182 Identities=16% Similarity=0.184 Sum_probs=135.1
Q ss_pred cccchHHHHHHHHHHHhhhhhHHHH-HHHhCCC------CChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCC
Q 021784 111 NDRRVEIVIAAAVTVLLGVGNRVLY-KLALVPL------KHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPK 183 (307)
Q Consensus 111 ~~~~~~v~i~~i~~Vi~Gv~N~Vl~-Kl~~~~~------~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk 183 (307)
.++.+.+.+++.+.-.+=+.=-|++ |++..+- ++.|-|+...+.++.+++-... .+..... -+-.-|+
T Consensus 9 ~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~--l~~~k~~---~~~~apl 83 (327)
T KOG1581|consen 9 ANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAM--LKWWKKE---LSGVAPL 83 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHH--Hhccccc---CCCCCch
Confidence 3455555555444333222222222 4554443 2677888888887777665333 2222211 1334578
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecC-CC-CC
Q 021784 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG-SN-PG 261 (307)
Q Consensus 184 ~kfli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sg-s~-~g 261 (307)
|+|..+++...++..++.-|+.|++=+.|.+--.+-+.-+|++=.++-|+||+..+|+.+++|.+|+.+-...+ ++ .+
T Consensus 84 ~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~ 163 (327)
T KOG1581|consen 84 YKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSS 163 (327)
T ss_pred hHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCcc
Confidence 99999999999999999999999999999999999888899999999999999999999999999997766543 22 23
Q ss_pred CCCCCcchHHHHHHHHHhhHHHHHHHHHHHhhhhhh
Q 021784 262 HSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAA 297 (307)
Q Consensus 262 ~s~~~~~vlw~lL~llS~ip~AlSnV~kE~~fkd~~ 297 (307)
++..+|.+.|.+|+...-.+.++-|..|+++|+++.
T Consensus 164 ~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k 199 (327)
T KOG1581|consen 164 KSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYK 199 (327)
T ss_pred ccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCC
Confidence 333479999999999999999999999999999653
No 12
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.50 E-value=7.8e-08 Score=78.41 Aligned_cols=99 Identities=20% Similarity=0.193 Sum_probs=77.5
Q ss_pred HHHHHHHHHHhcCccchhhhcCCCccchHhhHHHH-HHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhccccccc
Q 021784 160 VYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA-LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVN 238 (307)
Q Consensus 160 vyf~Il~~r~~~~~it~eml~~Pk~kfli~GllDa-l~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~ 238 (307)
+...+...+.+.++..++.+.-|+++..+.|++.. .+..+.+.|..|+|+ ...++.+...+|+++++.+++|+|.+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~ 89 (113)
T PF13536_consen 11 FLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPR 89 (113)
T ss_pred HHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHH
Confidence 33344444433333444455555455566688886 899999999999995 7779999999999999999999999999
Q ss_pred ccchhhheeeceeeEeecCCC
Q 021784 239 QLFGCFLVGIGVIITVASGSN 259 (307)
Q Consensus 239 qi~G~~IVl~Glivvv~sgs~ 259 (307)
+++|+.++++|++++..++.+
T Consensus 90 ~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 90 RWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999998887543
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.41 E-value=4.5e-06 Score=74.93 Aligned_cols=166 Identities=22% Similarity=0.185 Sum_probs=113.9
Q ss_pred HHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCCc-cchHhhHHHHHHH
Q 021784 119 IAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKA-PFVAVGLLEALAA 197 (307)
Q Consensus 119 i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk~-kfli~GllDal~~ 197 (307)
++.+..-+....+....|...+. +.|.+...+..+...... .+...+.... .......|++ ..+.-++..+...
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 84 (292)
T COG0697 10 LALLLWGLLWGLSFIALKLAVES--LDPFLFAAALRFLIAALL-LLPLLLLEPR--GLRPALRPWLLLLLLALLGLALPF 84 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHH-HHHHHHhhcc--cccccccchHHHHHHHHHHHHHHH
Confidence 33334435566677777776665 455554444322222222 1111111110 0011112223 3444557788899
Q ss_pred HHHHhhhccccccHHHHhccchHHHHHHHHH-HHhcccccccccchhhheeeceeeEeecCCCCCCCCCCcchHHHHHHH
Q 021784 198 ATGMAAGAILSGASIPILSQTFLVWQILLSI-IFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMI 276 (307)
Q Consensus 198 ~L~viA~~ytsgs~~~LL~q~~IP~tmllS~-ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s~~~~~vlw~lL~l 276 (307)
.+.+.+..|++.....++......++.+++. +++|+|.+..++.|.++..+|++++..++..... . ...++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~---~-~~~g~~~~l 160 (292)
T COG0697 85 LLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI---L-SLLGLLLAL 160 (292)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh---H-HHHHHHHHH
Confidence 9999999999999999999999999999996 7779999999999999999999999887543211 1 578899999
Q ss_pred HHhhHHHHHHHHHHHhh
Q 021784 277 VSFLLQAADTVLKEVIF 293 (307)
Q Consensus 277 lS~ip~AlSnV~kE~~f 293 (307)
++.+..|+.+++.++..
T Consensus 161 ~a~~~~a~~~~~~~~~~ 177 (292)
T COG0697 161 AAALLWALYTALVKRLS 177 (292)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999765
No 14
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=98.38 E-value=3.4e-07 Score=87.45 Aligned_cols=177 Identities=22% Similarity=0.236 Sum_probs=111.5
Q ss_pred HHHHHHHHhhhh-hHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHHHH
Q 021784 119 IAAAVTVLLGVG-NRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAA 197 (307)
Q Consensus 119 i~~i~~Vi~Gv~-N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk~kfli~GllDal~~ 197 (307)
++.+..|..|++ |.++.-. +.+...-..-+-.+.+|.|+...+.+..-+++.- ...+|-+.|+++-.+=...|
T Consensus 5 ~~ai~~vf~GCcsnvv~lE~-L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~-----k~kiplk~Y~i~V~mFF~vn 78 (330)
T KOG1583|consen 5 AAAISLVFGGCCSNVVFLEL-LVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTV-----KPKIPLKDYAITVAMFFIVN 78 (330)
T ss_pred HHHHHHHHHhhhchHHHHHH-HHHhCCCCeeehHHHHHHHHHHhceeeecccccc-----CCCCchhhhheehheeeeee
Confidence 344555555555 5554444 3332222233444555777776665533232221 13345444544332222222
Q ss_pred HHHHhhhc-cccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCC---------CCCCc
Q 021784 198 ATGMAAGA-ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH---------SLKGA 267 (307)
Q Consensus 198 ~L~viA~~-ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~---------s~~~~ 267 (307)
..-..|.. ..|.++-.+++......+|+++++++||||+..||..++++.+|++++-.-.+..+. +..+.
T Consensus 79 v~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~ 158 (330)
T KOG1583|consen 79 VTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSD 158 (330)
T ss_pred eeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCccccc
Confidence 23233333 678888999999999999999999999999999999999999999887663221111 00111
Q ss_pred c---hHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhcc
Q 021784 268 G---IFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLK 301 (307)
Q Consensus 268 ~---vlw~lL~llS~ip~AlSnV~kE~~fkd~~~~l~ 301 (307)
- .+|..+..++.+..|..-.|+|..+++|-|.-|
T Consensus 159 ~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~ 195 (330)
T KOG1583|consen 159 FFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWK 195 (330)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Confidence 1 455778889999999999999999999877543
No 15
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=98.36 E-value=3.9e-06 Score=81.32 Aligned_cols=174 Identities=19% Similarity=0.265 Sum_probs=137.5
Q ss_pred ccchHHHHHHHHHHHhhhhhHHHHHHHhCC-CCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhh--hcCCCccchH
Q 021784 112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVP-LKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEM--LSMPKAPFVA 188 (307)
Q Consensus 112 ~~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~-~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~em--l~~Pk~kfli 188 (307)
++.....++...-..+.+...+..|..+++ -++||.+++.++.+.=...+. ..+ ..+..+... .+.+.+..+-
T Consensus 13 ~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~---v~~-~l~~~~~~~~~~~~~~~~llp 88 (316)
T KOG1441|consen 13 KKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALL---VIK-VLKLVPPSKISSKLPLRTLLP 88 (316)
T ss_pred chhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHH---HHH-HhcCCCCCccccccchHHHHH
Confidence 466777777888888899999999999998 669999999884322111111 111 111111111 3345567888
Q ss_pred hhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCCCCCCcc
Q 021784 189 VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAG 268 (307)
Q Consensus 189 ~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s~~~~~ 268 (307)
+|++-..+..++..++.|+|.+-.|++--.++|++.++++++.+++|+..-++-.+.++.|+.++-..+ .+-.
T Consensus 89 l~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e-------~~fn 161 (316)
T KOG1441|consen 89 LGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE-------LSFN 161 (316)
T ss_pred HHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc-------cccc
Confidence 999999999999999999999999999999999999999999999999999999999999998877632 2345
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHhhhhh
Q 021784 269 IFWSLLMIVSFLLQAADTVLKEVIFLDA 296 (307)
Q Consensus 269 vlw~lL~llS~ip~AlSnV~kE~~fkd~ 296 (307)
++|-+..++|.+.-|++|++.|+.+++.
T Consensus 162 ~~G~i~a~~s~~~~al~~I~~~~ll~~~ 189 (316)
T KOG1441|consen 162 LFGFISAMISNLAFALRNILSKKLLTSK 189 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 7888889999999999999999988643
No 16
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.30 E-value=4.4e-06 Score=75.40 Aligned_cols=107 Identities=19% Similarity=0.072 Sum_probs=90.4
Q ss_pred ccchHhhH-HHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCC
Q 021784 184 APFVAVGL-LEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH 262 (307)
Q Consensus 184 ~kfli~Gl-lDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~ 262 (307)
+++++.|. +-.+...+.+.|..|++.....++.+....++++++.+|+|+|.+..|++|+.+.++|+++...++.
T Consensus 47 ~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~---- 122 (260)
T TIGR00950 47 LRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN---- 122 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc----
Confidence 34566664 4788889999999999999999999999999999999999999999999999999999988764431
Q ss_pred CCCCcchHHHHHHHHHhhHHHHHHHHHHHhhhhh
Q 021784 263 SLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDA 296 (307)
Q Consensus 263 s~~~~~vlw~lL~llS~ip~AlSnV~kE~~fkd~ 296 (307)
.+....|+++.++|.+..|+.+++.-+..++.
T Consensus 123 --~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~ 154 (260)
T TIGR00950 123 --LSINPAGLLLGLGSGISFALGTVLYKRLVKKE 154 (260)
T ss_pred --ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcC
Confidence 12446789999999999999999977765543
No 17
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.19 E-value=2.3e-05 Score=73.60 Aligned_cols=105 Identities=18% Similarity=0.258 Sum_probs=79.5
Q ss_pred chHhhHHHHHHH-HHHHhhhcc-ccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCCC
Q 021784 186 FVAVGLLEALAA-ATGMAAGAI-LSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHS 263 (307)
Q Consensus 186 fli~GllDal~~-~L~viA~~y-tsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s 263 (307)
.+..|++=.... .+.+.+..| +|.....++.+...+++++++++++|+|.+..|++|+++.++|+.+...++.+.
T Consensus 61 ~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~--- 137 (299)
T PRK11453 61 LLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG--- 137 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC---
Confidence 333455433333 344567777 466677888899989999999999999999999999999999998877542221
Q ss_pred CCCcchHHHHHHHHHhhHHHHHHHHHHHhhh
Q 021784 264 LKGAGIFWSLLMIVSFLLQAADTVLKEVIFL 294 (307)
Q Consensus 264 ~~~~~vlw~lL~llS~ip~AlSnV~kE~~fk 294 (307)
.+....++++.+++++..|+.+++..+..+
T Consensus 138 -~~~~~~G~~l~l~aal~~a~~~v~~~~~~~ 167 (299)
T PRK11453 138 -QHVAMLGFMLTLAAAFSWACGNIFNKKIMS 167 (299)
T ss_pred -cchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 122457999999999999999999887543
No 18
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.18 E-value=2.5e-05 Score=73.32 Aligned_cols=163 Identities=12% Similarity=0.011 Sum_probs=101.8
Q ss_pred HHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHHHH-HH
Q 021784 121 AAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAA-AT 199 (307)
Q Consensus 121 ~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk~kfli~GllDal~~-~L 199 (307)
.++.+++-..|-+..|...+.+. |+.+..+-...-.++.+++ .+ . ++ .+ ..+|++++.+.+-.... .+
T Consensus 9 ~l~a~~~Wg~~~~~~k~~~~~~~--P~~~~~~R~~~a~l~l~~~--~~--~---~~-~~-~~~~~~~~~~~l~~~~~~~~ 77 (295)
T PRK11689 9 GLIAILLWSTMVGLIRGVSESLG--PVGGAAMIYSVSGLLLLLT--VG--F---PR-LR-QFPKRYLLAGGLLFVSYEIC 77 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHccCC--hHHHHHHHHHHHHHHHHHH--cc--c---cc-cc-cccHHHHHHHhHHHHHHHHH
Confidence 33344445577889998877543 3333333221111111111 11 1 11 11 11345566666643333 33
Q ss_pred HHhhhc----cccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCC-CC-C--CCCCcchHH
Q 021784 200 GMAAGA----ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSN-PG-H--SLKGAGIFW 271 (307)
Q Consensus 200 ~viA~~----ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~-~g-~--s~~~~~vlw 271 (307)
.+.|.. +++.....++......++++++++++|+|.+..|++|+++.++|+.+...++.+ +. + ...+....|
T Consensus 78 ~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G 157 (295)
T PRK11689 78 LALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLS 157 (295)
T ss_pred HHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHH
Confidence 344544 456566688999999999999999999999999999999999999887765321 10 0 011234568
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhh
Q 021784 272 SLLMIVSFLLQAADTVLKEVIFL 294 (307)
Q Consensus 272 ~lL~llS~ip~AlSnV~kE~~fk 294 (307)
+++.++|.+.+|+.+++-++.-+
T Consensus 158 ~~~~l~aa~~~A~~~v~~k~~~~ 180 (295)
T PRK11689 158 YGLAFIGAFIWAAYCNVTRKYAR 180 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999888543
No 19
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.11 E-value=1.7e-05 Score=73.67 Aligned_cols=102 Identities=10% Similarity=-0.005 Sum_probs=82.5
Q ss_pred ccchH-hhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCC
Q 021784 184 APFVA-VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH 262 (307)
Q Consensus 184 ~kfli-~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~ 262 (307)
|.+++ -|+..+....+...|+++++.....++.....+++++++++++|+|.+.+|++|+.++++|+.+...++.. .
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~-~- 140 (281)
T TIGR03340 63 WLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA-Q- 140 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc-c-
Confidence 33444 44568888999999999999999999999999999999999999999999999999999999876654321 1
Q ss_pred CCCCcchHHHHHHHHHhhHHHHHHHHHHH
Q 021784 263 SLKGAGIFWSLLMIVSFLLQAADTVLKEV 291 (307)
Q Consensus 263 s~~~~~vlw~lL~llS~ip~AlSnV~kE~ 291 (307)
....+.++.+++.+.+|+.+++..+
T Consensus 141 ----~~~~g~~~~l~aal~~a~~~i~~k~ 165 (281)
T TIGR03340 141 ----HRRKAYAWALAAALGTAIYSLSDKA 165 (281)
T ss_pred ----cchhHHHHHHHHHHHHHHhhhhccc
Confidence 1234556788888899998886554
No 20
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.06 E-value=6.2e-06 Score=65.17 Aligned_cols=69 Identities=32% Similarity=0.403 Sum_probs=63.6
Q ss_pred cchHhhHHH-HHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeE
Q 021784 185 PFVAVGLLE-ALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (307)
Q Consensus 185 kfli~GllD-al~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivv 253 (307)
.++++|.+. +.+..+.+.|..+++.+...++.....+++++++++++|+|.+..|++|++++++|++++
T Consensus 55 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 55 WLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 466678774 999999999999999999999999999999999999999999999999999999998754
No 21
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.03 E-value=2.6e-05 Score=73.23 Aligned_cols=92 Identities=18% Similarity=0.121 Sum_probs=78.2
Q ss_pred hHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCCCCCCcch
Q 021784 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI 269 (307)
Q Consensus 190 GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s~~~~~v 269 (307)
+++=+.+..+.+.|..++|.....++..+...++++++++|+|+|.+..|++|+++.++|+++...++ + +.
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~---~----~~-- 150 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTF---G----SL-- 150 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHc---C----Cc--
Confidence 35566678899999999999999999999999999999999999999999999999999998876442 1 11
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHh
Q 021784 270 FWSLLMIVSFLLQAADTVLKEVI 292 (307)
Q Consensus 270 lw~lL~llS~ip~AlSnV~kE~~ 292 (307)
+++.++|++.+|+.+++.++.
T Consensus 151 --~~~~l~aa~~~a~~~i~~r~~ 171 (296)
T PRK15430 151 --PIIALGLAFSFAFYGLVRKKI 171 (296)
T ss_pred --cHHHHHHHHHHHHHHHHHHhc
Confidence 146788899999999998874
No 22
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.02 E-value=3.6e-05 Score=70.26 Aligned_cols=96 Identities=17% Similarity=0.133 Sum_probs=80.5
Q ss_pred chHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCCCCC
Q 021784 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLK 265 (307)
Q Consensus 186 fli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s~~ 265 (307)
..+.|++=+.+..+.+.|.+|++.....++.++.-.|+++++.+|+|+|.+..|++|+++.++|+++...++ +
T Consensus 73 ~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~---~---- 145 (256)
T TIGR00688 73 LLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK---G---- 145 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc---C----
Confidence 455677778888999999999999999999999999999999999999999999999999999998765432 1
Q ss_pred CcchHHHHHHHHHhhHHHHHHHHHHHh
Q 021784 266 GAGIFWSLLMIVSFLLQAADTVLKEVI 292 (307)
Q Consensus 266 ~~~vlw~lL~llS~ip~AlSnV~kE~~ 292 (307)
+. .++.+++.+.+|+.+++.++.
T Consensus 146 ~~----~~~~l~aa~~~a~~~i~~~~~ 168 (256)
T TIGR00688 146 SL----PWEALVLAFSFTAYGLIRKAL 168 (256)
T ss_pred Cc----hHHHHHHHHHHHHHHHHHhhc
Confidence 11 135678899999988887764
No 23
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.00 E-value=7.2e-05 Score=70.02 Aligned_cols=164 Identities=13% Similarity=0.141 Sum_probs=110.0
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHH-
Q 021784 115 VEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLE- 193 (307)
Q Consensus 115 ~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk~kfli~GllD- 193 (307)
+.+..+.+.+.++=..|-+..|...+.+..... ..+-...-.++.+++...+ + +..++ + .++.++++.|.+-
T Consensus 7 ~~~~~~~~~~~~iWg~~~~~~K~~~~~~~p~~~--~~~R~~~a~l~ll~~~~~~-~-~~~~~--~-~~~~~~~~~g~~~~ 79 (292)
T PRK11272 7 LPLFGALFALYIIWGSTYLVIRIGVESWPPLMM--AGVRFLIAGILLLAFLLLR-G-HPLPT--L-RQWLNAALIGLLLL 79 (292)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhccCCHHHH--HHHHHHHHHHHHHHHHHHh-C-CCCCc--H-HHHHHHHHHHHHHH
Confidence 455566666677777799999988875544332 2222211111222222222 1 11110 1 0123456677664
Q ss_pred HHHHHHHHhhh-ccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCCCCCCcchHHH
Q 021784 194 ALAAATGMAAG-AILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWS 272 (307)
Q Consensus 194 al~~~L~viA~-~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s~~~~~vlw~ 272 (307)
+....+...+. .+++.....++......++++++.+ +|+|.++.|++|+++.++|+++....+. . +....++
T Consensus 80 ~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~--~----~~~~~G~ 152 (292)
T PRK11272 80 AVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN--L----SGNPWGA 152 (292)
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc--c----ccchHHH
Confidence 45677778888 8898888899999999999999985 6999999999999999999887643211 1 2235789
Q ss_pred HHHHHHhhHHHHHHHHHHHh
Q 021784 273 LLMIVSFLLQAADTVLKEVI 292 (307)
Q Consensus 273 lL~llS~ip~AlSnV~kE~~ 292 (307)
++.++|.+.+|+.+++.++.
T Consensus 153 l~~l~a~~~~a~~~~~~~~~ 172 (292)
T PRK11272 153 ILILIASASWAFGSVWSSRL 172 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999998774
No 24
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=97.83 E-value=5.5e-05 Score=74.92 Aligned_cols=103 Identities=33% Similarity=0.306 Sum_probs=90.5
Q ss_pred HhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCC-CCCC
Q 021784 188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH-SLKG 266 (307)
Q Consensus 188 i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~-s~~~ 266 (307)
....+=.++|+....|+.||+..++.+|+-++=-||+.++.+|...|+++.+.++++++++|++++...++.+.. ..++
T Consensus 164 ~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~ 243 (416)
T KOG2765|consen 164 FFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPAS 243 (416)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCcc
Confidence 345556789999999999999999999999999999999999999999999999999999999999988764422 2456
Q ss_pred cchHHHHHHHHHhhHHHHHHHHHH
Q 021784 267 AGIFWSLLMIVSFLLQAADTVLKE 290 (307)
Q Consensus 267 ~~vlw~lL~llS~ip~AlSnV~kE 290 (307)
...+|+++-++|++.||+=.|.=-
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk 267 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLK 267 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHH
Confidence 779999999999999999877643
No 25
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=97.49 E-value=0.00013 Score=70.13 Aligned_cols=173 Identities=16% Similarity=0.203 Sum_probs=127.5
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHhC--CCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHH
Q 021784 115 VEIVIAAAVTVLLGVGNRVLYKLALV--PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLL 192 (307)
Q Consensus 115 ~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~--~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk~kfli~Gll 192 (307)
..-.+++.++...=..|-++.-+..+ .++.|.|+++..+...|.......+ ..+..+.+-.||+-|.+++++
T Consensus 42 ~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~------~~~~~k~r~iP~rtY~~la~~ 115 (367)
T KOG1582|consen 42 TQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIEL------QLIQTKRRVIPWRTYVILAFL 115 (367)
T ss_pred hhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEE------EeecccceecchhHhhhhHhh
Confidence 34445555555555556666665555 4668999999988887765432211 113445677899999999999
Q ss_pred HHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCCCCCCcchHHH
Q 021784 193 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWS 272 (307)
Q Consensus 193 Dal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s~~~~~vlw~ 272 (307)
-+-..-|..-...|++=+-|.+.-|+-+.=+|+-..++=++||.+..+..+.+..+|++.--..|+...+ .-...|.
T Consensus 116 t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sP---NF~~~Gv 192 (367)
T KOG1582|consen 116 TVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSP---NFNLIGV 192 (367)
T ss_pred hhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCC---CcceeeH
Confidence 8888888888888999999999999999889999999999999999999999999999887766654322 3345555
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhhh
Q 021784 273 LLMIVSFLLQAADTVLKEVIFLDA 296 (307)
Q Consensus 273 lL~llS~ip~AlSnV~kE~~fkd~ 296 (307)
.++-.+-+..|+--=.||+.+|..
T Consensus 193 ~mIsgALl~DA~iGNvQEk~m~~~ 216 (367)
T KOG1582|consen 193 MMISGALLADAVIGNVQEKAMKMN 216 (367)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhhC
Confidence 555555566676666789888754
No 26
>COG2510 Predicted membrane protein [Function unknown]
Probab=97.44 E-value=0.001 Score=57.47 Aligned_cols=132 Identities=23% Similarity=0.284 Sum_probs=89.0
Q ss_pred HHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCCccchHh-hHHHHHHH
Q 021784 119 IAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAV-GLLEALAA 197 (307)
Q Consensus 119 i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk~kfli~-GllDal~~ 197 (307)
++.++--.+.....|+.|+-.+.+- |-|-+..-+.+-......+++. +..-..+.| ..-+.|-|+++ |+.-.++-
T Consensus 6 ~~ALLsA~fa~L~~iF~KIGl~~vd--p~~At~IRtiVi~~~l~~v~~~-~g~~~~~~~-~~~k~~lflilSGla~glsw 81 (140)
T COG2510 6 IYALLSALFAGLTPIFAKIGLEGVD--PDFATTIRTIVILIFLLIVLLV-TGNWQAGGE-IGPKSWLFLILSGLAGGLSW 81 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccC--ccHHHHHHHHHHHHHHHHHHHh-cCceecccc-cCcceehhhhHHHHHHHHHH
Confidence 3444445567778899999887443 2333333332222222122222 111111111 12223567665 46678888
Q ss_pred HHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEe
Q 021784 198 ATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (307)
Q Consensus 198 ~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv 254 (307)
++-+.|...=..+...-++-..+.++.++|++|||.|.+..+++|+.++++|.+++.
T Consensus 82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 888999988888888999999999999999999999999999999999999998864
No 27
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=97.25 E-value=0.006 Score=57.25 Aligned_cols=161 Identities=12% Similarity=-0.008 Sum_probs=98.4
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHH
Q 021784 115 VEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA 194 (307)
Q Consensus 115 ~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk~kfli~GllDa 194 (307)
.-+..+.+.+++.+ .|.++.|...+.+.... +..+-...-.++.+++ ..+.+. ..+++. +++.++.|++-.
T Consensus 12 ~~~~~~~la~~~~~-~~~~~~K~~~~~~~~~~--~~~~R~~~a~l~l~~~-~~~~~~-~~~~~~----~~~~~~~g~~~~ 82 (293)
T PRK10532 12 LPILLLLIAMASIQ-SGASLAKSLFPLVGAPG--VTALRLALGTLILIAI-FKPWRL-RFAKEQ----RLPLLFYGVSLG 82 (293)
T ss_pred hHHHHHHHHHHHHH-hhHHHHHHHHHHcCHHH--HHHHHHHHHHHHHHHH-HhHHhc-cCCHHH----HHHHHHHHHHHH
Confidence 33555666666666 56668998887433322 2222111111111111 111111 111111 134567888888
Q ss_pred HHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCCCCCCcchHHHHH
Q 021784 195 LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLL 274 (307)
Q Consensus 195 l~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s~~~~~vlw~lL 274 (307)
..+.+.+.|.+|+|.....++..+...++++++ ++|.+ ++.++.+.++|+.+...++.+. ++....++++
T Consensus 83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--~~~~~~i~~~Gv~li~~~~~~~----~~~~~~G~ll 152 (293)
T PRK10532 83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--DFVWVVLAVLGLWFLLPLGQDV----SHVDLTGAAL 152 (293)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--HHHHHHHHHHHHheeeecCCCc----ccCChHHHHH
Confidence 888999999999999988888877777777766 35544 4556777888987766443221 1234679999
Q ss_pred HHHHhhHHHHHHHHHHHhhh
Q 021784 275 MIVSFLLQAADTVLKEVIFL 294 (307)
Q Consensus 275 ~llS~ip~AlSnV~kE~~fk 294 (307)
.+++.+.+|+.+++-.+.-+
T Consensus 153 ~l~aa~~~a~~~v~~r~~~~ 172 (293)
T PRK10532 153 ALGAGACWAIYILSGQRAGA 172 (293)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999998665433
No 28
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.22 E-value=0.00033 Score=67.26 Aligned_cols=108 Identities=19% Similarity=0.253 Sum_probs=82.2
Q ss_pred Cccch-HhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeec----C
Q 021784 183 KAPFV-AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS----G 257 (307)
Q Consensus 183 k~kfl-i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~s----g 257 (307)
+++++ +=|+.-..|-.+++.|+.|.|.+=..+....+-.+|.++++++||.+|+.++-+|..+.+.|+++.+=| |
T Consensus 96 ~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG 175 (346)
T KOG4510|consen 96 KRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFG 175 (346)
T ss_pred cEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccC
Confidence 34444 467778889999999999999999999999999999999999999999999999999999999998876 3
Q ss_pred CCC-CC-CCC-CcchHHHHHHHHHhhHHHHHHHHHH
Q 021784 258 SNP-GH-SLK-GAGIFWSLLMIVSFLLQAADTVLKE 290 (307)
Q Consensus 258 s~~-g~-s~~-~~~vlw~lL~llS~ip~AlSnV~kE 290 (307)
+.. +. +.. +....+...-+.|..+.|--.++-.
T Consensus 176 ~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR 211 (346)
T KOG4510|consen 176 DTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILR 211 (346)
T ss_pred CCccccccccccccCCchHHHHHhHhhhhhHHHHHH
Confidence 322 11 111 3334456666666666554444433
No 29
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.22 E-value=0.00024 Score=68.17 Aligned_cols=75 Identities=24% Similarity=0.425 Sum_probs=66.3
Q ss_pred cchHhh-HHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCC
Q 021784 185 PFVAVG-LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSN 259 (307)
Q Consensus 185 kfli~G-llDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~ 259 (307)
+.++.| ++++++..+.+.|+.+.|.++.+-|....++++++++.++||+|.+..+++|+.+|++|.++.+..+..
T Consensus 51 ~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~ 126 (300)
T PF05653_consen 51 PLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPK 126 (300)
T ss_pred HHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCC
Confidence 344455 357899999999999999999999999999999999999999999999999999999999887765443
No 30
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.15 E-value=0.0048 Score=55.68 Aligned_cols=65 Identities=25% Similarity=0.311 Sum_probs=59.0
Q ss_pred chHhhHHH-HHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeece
Q 021784 186 FVAVGLLE-ALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGV 250 (307)
Q Consensus 186 fli~GllD-al~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Gl 250 (307)
.+.+|.+. ..+..+.+.|..+++......+.....++++++++++++++.+..|++|+.+++.|+
T Consensus 194 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 194 LLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 45577664 678888899999999999999999999999999999999999999999999999886
No 31
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.15 E-value=0.0066 Score=57.39 Aligned_cols=103 Identities=20% Similarity=0.129 Sum_probs=83.2
Q ss_pred hhHHHHHHHHHHHhhhccccccHHHHhcc-chHHHHHHHHHHHhcccccccc----cchhhheeeceeeEeecCCCCCC-
Q 021784 189 VGLLEALAAATGMAAGAILSGASIPILSQ-TFLVWQILLSIIFLGRRYRVNQ----LFGCFLVGIGVIITVASGSNPGH- 262 (307)
Q Consensus 189 ~GllDal~~~L~viA~~ytsgs~~~LL~q-~~IP~tmllS~ifLk~RY~~~q----i~G~~IVl~Glivvv~sgs~~g~- 262 (307)
-|++-+.+|++.+.|.+++..+....+.+ ....+..+++.+++|+|.+..+ ++|++++++|++++..++.++.+
T Consensus 65 ~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~ 144 (290)
T TIGR00776 65 SGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGI 144 (290)
T ss_pred HHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccccc
Confidence 34558899999999999999999988888 6666899999999999999999 99999999999888766422111
Q ss_pred CCCCcchHHHHHHHHHhhHHHHHHHHHHH
Q 021784 263 SLKGAGIFWSLLMIVSFLLQAADTVLKEV 291 (307)
Q Consensus 263 s~~~~~vlw~lL~llS~ip~AlSnV~kE~ 291 (307)
....+...+.++-++|.+.+|...+.-+.
T Consensus 145 ~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~ 173 (290)
T TIGR00776 145 KSEFNFKKGILLLLMSTIGYLVYVVVAKA 173 (290)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 00033366889999999999998888774
No 32
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=96.99 E-value=0.0044 Score=51.71 Aligned_cols=69 Identities=26% Similarity=0.359 Sum_probs=62.6
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceee
Q 021784 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (307)
Q Consensus 184 ~kfli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Gliv 252 (307)
..+++.|++=..-|+..+....+|++...++++..-.+.+.++|+++++...+..|++|..++++|.++
T Consensus 82 ~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 82 FLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 345567777888888899999999999999999999999999999999999999999999999999864
No 33
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=96.73 E-value=0.0089 Score=58.37 Aligned_cols=171 Identities=15% Similarity=0.205 Sum_probs=120.8
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCC----ccchHhhHH
Q 021784 117 IVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPK----APFVAVGLL 192 (307)
Q Consensus 117 v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk----~kfli~Gll 192 (307)
.+.+++++-.+..+=+-.+|-... -.+||-|++.++..+-. .|+.+..+-+....++.-..+.| ++.+.-|++
T Consensus 17 ~L~lVl~yY~~Si~Ltf~~~~~~~-~f~fPLf~ts~h~~v~f--lfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala 93 (349)
T KOG1443|consen 17 TLALVLLYYFLSIGLTFYFKWLTK-NFHFPLFVTSLHLAVKF--LFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA 93 (349)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhc-CcCCchHHHHHHHHHHH--HHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh
Confidence 334446666666665666666444 37999999988764322 22333333222222222233444 233456666
Q ss_pred HHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCCCCCCcchHHH
Q 021784 193 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWS 272 (307)
Q Consensus 193 Dal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s~~~~~vlw~ 272 (307)
-+.---+...+..|++.+.+.|-.-++|.|.+++|.+|-=.|+++.=.+=++++.+|+++...-.+ +-.+.|-
T Consensus 94 ta~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT-------qf~i~Gf 166 (349)
T KOG1443|consen 94 TALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST-------QFNIEGF 166 (349)
T ss_pred hhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc-------ceeehhH
Confidence 777777899999999999999999999999999999998888888777777888888888776432 2346778
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhhhh
Q 021784 273 LLMIVSFLLQAADTVLKEVIFLDAA 297 (307)
Q Consensus 273 lL~llS~ip~AlSnV~kE~~fkd~~ 297 (307)
.+++.+....++-=++-.++.+|..
T Consensus 167 ~lv~~aS~~sGlRW~~tQ~ll~~~~ 191 (349)
T KOG1443|consen 167 FLVLAASLLSGLRWAFTQMLLRNQP 191 (349)
T ss_pred HHHHHHHHhhhhhHHHHHHHHhcCc
Confidence 8999999999999999998888765
No 34
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.69 E-value=0.0018 Score=61.42 Aligned_cols=120 Identities=14% Similarity=0.157 Sum_probs=90.0
Q ss_pred hhcCCCccchHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecC
Q 021784 178 MLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (307)
Q Consensus 178 ml~~Pk~kfli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sg 257 (307)
..+.|-|-|+.-++--.++-.-..-|.+|+|-+-+.+=-..--.=+|++-.+|+||.|++.+|.+++.+++|+++-..-.
T Consensus 80 ~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~ 159 (337)
T KOG1580|consen 80 IDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKE 159 (337)
T ss_pred ccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccc
Confidence 34566677877666666666677778889998877665544444478999999999999999999999999998877642
Q ss_pred CCCCCCCCCcchHHHHHHHHHhhHHHHHHHHHHHhhhhhh
Q 021784 258 SNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAA 297 (307)
Q Consensus 258 s~~g~s~~~~~vlw~lL~llS~ip~AlSnV~kE~~fkd~~ 297 (307)
..-++.....-.+|-+|.++|....++..+.||.+=..|+
T Consensus 160 ~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq 199 (337)
T KOG1580|consen 160 NKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQ 199 (337)
T ss_pred cccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhc
Confidence 1111122244568899999999999999999999544443
No 35
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.67 E-value=0.0059 Score=57.68 Aligned_cols=136 Identities=18% Similarity=0.166 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccc---hhhhcCCC--ccchHhh
Q 021784 116 EIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVT---DEMLSMPK--APFVAVG 190 (307)
Q Consensus 116 ~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it---~eml~~Pk--~kfli~G 190 (307)
.++++.+.+++ +....+..+...++.+..++-+-..+++.-++..+.....-. .+... +-...-|. +..++..
T Consensus 155 G~~ll~~sl~~-~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-~~~~~~~~~f~~~~p~~~~~l~~~s 232 (303)
T PF08449_consen 155 GIILLLLSLLL-DAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLP-TGEFRSAIRFISAHPSVLLYLLLFS 232 (303)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-hhHhhHHHHHHHHhHHHHHHHHHHH
Confidence 55555555544 555556666666666655543333333221122221111100 11000 00111222 3455677
Q ss_pred HHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeE
Q 021784 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (307)
Q Consensus 191 llDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivv 253 (307)
++-++++...+.-...++.....+....--++++++|.++.+++++..||+|++++++|+.+-
T Consensus 233 ~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~ 295 (303)
T PF08449_consen 233 LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLY 295 (303)
T ss_pred HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHH
Confidence 888888888888778888888999999999999999999999999999999999999998653
No 36
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.56 E-value=0.0047 Score=55.51 Aligned_cols=108 Identities=18% Similarity=0.066 Sum_probs=73.9
Q ss_pred HhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCCCCCCc
Q 021784 188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGA 267 (307)
Q Consensus 188 i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s~~~~ 267 (307)
+++..=...+.+...+..+..+.-.+.. |.-+..+++++...+++|.+..|+.+......|+.++-...........++
T Consensus 4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~ 82 (222)
T TIGR00803 4 VPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGN 82 (222)
T ss_pred ccchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccccc
Confidence 3444455566666666666666666666 777888888888888888888888777666666655433221111112345
Q ss_pred chHHHHHHHHHhhHHHHHHHHHHHhhhhh
Q 021784 268 GIFWSLLMIVSFLLQAADTVLKEVIFLDA 296 (307)
Q Consensus 268 ~vlw~lL~llS~ip~AlSnV~kE~~fkd~ 296 (307)
.+.+...++.+++..++..+|+|+.+|++
T Consensus 83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~~ 111 (222)
T TIGR00803 83 PVVGLSAVLSALLSSGFAGVYFEKILKDG 111 (222)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHcccCC
Confidence 66777778888999999999999998875
No 37
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=96.38 E-value=0.0056 Score=56.93 Aligned_cols=64 Identities=28% Similarity=0.413 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceee
Q 021784 189 VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (307)
Q Consensus 189 ~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Gliv 252 (307)
.+++..++..+.+.+.++.+.+....+.+...++..++++++++++.+..|++|+.++++|+.+
T Consensus 217 ~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 217 GGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 4466888889999999999999999999999999999999999999999999999999999865
No 38
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.96 E-value=0.038 Score=53.56 Aligned_cols=84 Identities=15% Similarity=0.159 Sum_probs=71.5
Q ss_pred hccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCCCCCCcchHHHHHHHHHhhHHH
Q 021784 204 GAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQA 283 (307)
Q Consensus 204 ~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s~~~~~vlw~lL~llS~ip~A 283 (307)
+.|.+.+-.++=+....||+.++++.+||.|=+..-+.||.++++|..+ |.+.+++.+.-.+.|.++-++|++.-|
T Consensus 123 L~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l----GvdqE~~~~~ls~~GvifGVlaSl~vA 198 (347)
T KOG1442|consen 123 LKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL----GVDQEGSTGTLSWIGVIFGVLASLAVA 198 (347)
T ss_pred hhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee----ccccccccCccchhhhHHHHHHHHHHH
Confidence 4688888889999999999999999999999999999999999999877 555544556677889999999999999
Q ss_pred HHHHHHHH
Q 021784 284 ADTVLKEV 291 (307)
Q Consensus 284 lSnV~kE~ 291 (307)
+-.++-.+
T Consensus 199 lnaiytkk 206 (347)
T KOG1442|consen 199 LNAIYTKK 206 (347)
T ss_pred HHHHhhhe
Confidence 88877553
No 39
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=95.93 E-value=0.0086 Score=49.51 Aligned_cols=64 Identities=13% Similarity=0.048 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEe
Q 021784 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (307)
Q Consensus 191 llDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv 254 (307)
++-..+.++...+....|.+....+-+....++++++++++|.|.+..|++|..++++|+++..
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4456677788888888888887766679999999999999999999999999999999987653
No 40
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.82 E-value=0.016 Score=56.66 Aligned_cols=71 Identities=20% Similarity=0.313 Sum_probs=62.8
Q ss_pred hHhhHH-HHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecC
Q 021784 187 VAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (307)
Q Consensus 187 li~Gll-Dal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sg 257 (307)
.+.|++ =.+|.+.-+.||++-|.++..-|....++.+.+++.+|||+|.+..-.+||++|++|-.+.+.-.
T Consensus 67 Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha 138 (335)
T KOG2922|consen 67 WWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA 138 (335)
T ss_pred HHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence 334533 45688889999999999999999999999999999999999999999999999999998887743
No 41
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.81 E-value=0.089 Score=51.38 Aligned_cols=171 Identities=19% Similarity=0.218 Sum_probs=115.2
Q ss_pred cchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHH--HhhhhhHHHHHHHHHHHHhcCccchhhhcCCC-ccchHh
Q 021784 113 RRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQ--LATFGYVAVYFSILYLRYHAGIVTDEMLSMPK-APFVAV 189 (307)
Q Consensus 113 ~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q--~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk-~kfli~ 189 (307)
...+-++..+.|.+....-++.-|.... -.+||.++.- .|++..+++- +.-.+.|-+.-|.++... ||++.+
T Consensus 9 ~~~~~l~sa~~Y~~sS~lm~vvNK~vls-~y~f~~~l~l~~~Q~l~s~~~v----~~lk~~~lv~~~~l~~~~~kk~~P~ 83 (314)
T KOG1444|consen 9 KQSSPLLSALFYCLSSILMTVVNKIVLS-SYNFPMGLLLMLLQSLASVLVV----LVLKRLGLVNFRPLDLRTAKKWFPV 83 (314)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCcHHHHHHHHHHHHHHHHH----HHHHHhceeecCCcChHHHHHHccH
Confidence 3344466778888888888999998776 2355555444 4554444322 121223333333222111 566778
Q ss_pred hHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCCCCCCcch
Q 021784 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI 269 (307)
Q Consensus 190 GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s~~~~~v 269 (307)
.++=...-+....+.+|.+.++..++...++..+++.=..|+|+|.+..-+..++..++|-.....++.. ....+.
T Consensus 84 ~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~s----f~~~gY 159 (314)
T KOG1444|consen 84 SLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLS----FNLRGY 159 (314)
T ss_pred HHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccce----ecchhH
Confidence 8888888899999999999999999999999999999999999999999888888888877766655421 222234
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHhhhh
Q 021784 270 FWSLLMIVSFLLQAADTVLKEVIFLD 295 (307)
Q Consensus 270 lw~lL~llS~ip~AlSnV~kE~~fkd 295 (307)
.|.+ +.++..|.-.++-++..+.
T Consensus 160 ~w~~---~n~~~~a~~~v~~kk~vd~ 182 (314)
T KOG1444|consen 160 SWAL---ANCLTTAAFVVYVKKSVDS 182 (314)
T ss_pred HHHH---HHHHHHHHHHHHHHHhhcc
Confidence 5544 4555556666666655443
No 42
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=95.75 E-value=0.053 Score=50.92 Aligned_cols=70 Identities=20% Similarity=0.157 Sum_probs=61.3
Q ss_pred hHhhHHH-HHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeec
Q 021784 187 VAVGLLE-ALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (307)
Q Consensus 187 li~GllD-al~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~s 256 (307)
+.+|++- +.+..+.+.+.++++.+...++.....++.+++++++++.+.+..|++|+.++++|++.....
T Consensus 212 l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 212 LAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 4577664 455557799999999999999999999999999999999999999999999999988776544
No 43
>PRK11689 aromatic amino acid exporter; Provisional
Probab=95.60 E-value=0.031 Score=52.52 Aligned_cols=71 Identities=11% Similarity=0.005 Sum_probs=63.1
Q ss_pred chHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeec
Q 021784 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (307)
Q Consensus 186 fli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~s 256 (307)
.+..|+.-.++.++.+.+.++++.+...++.-...++.+++++++|+++.+..|++|++++++|+.+....
T Consensus 218 l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 218 LLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 34466667778888999999999999999999999999999999999999999999999999998776544
No 44
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=95.27 E-value=0.057 Score=53.12 Aligned_cols=68 Identities=12% Similarity=0.188 Sum_probs=58.8
Q ss_pred hhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeec
Q 021784 189 VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (307)
Q Consensus 189 ~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~s 256 (307)
.|+.-.++-.+.+.+..+.+++-..+......++++++++++|+.+.+..|++|++++++|+.++..+
T Consensus 262 ~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 262 MAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG 329 (358)
T ss_pred HHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 44444556666777888999999999999999999999999999999999999999999999887654
No 45
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=95.18 E-value=0.08 Score=47.43 Aligned_cols=70 Identities=27% Similarity=0.385 Sum_probs=62.2
Q ss_pred cchHhhHHHH-HHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEe
Q 021784 185 PFVAVGLLEA-LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (307)
Q Consensus 185 kfli~GllDa-l~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv 254 (307)
.....|++-. ++.++...+....+.....++....+++.+++++++++++.+..|++|+++++.|+.+..
T Consensus 216 ~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 216 LLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence 4566777777 699999999999999999999988899999999999999999999999999999887644
No 46
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=94.90 E-value=0.13 Score=46.28 Aligned_cols=67 Identities=13% Similarity=0.155 Sum_probs=60.7
Q ss_pred chHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceee
Q 021784 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (307)
Q Consensus 186 fli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Gliv 252 (307)
...+.++-+.++.+......|.+.....+....-+.++.++|+++.+...+..|++|+.+|+.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 4456677888889988888999999999999999999999999999999999999999999999865
No 47
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=94.67 E-value=0.12 Score=50.21 Aligned_cols=63 Identities=11% Similarity=0.082 Sum_probs=53.1
Q ss_pred hHHHHHHHHH----HHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceee
Q 021784 190 GLLEALAAAT----GMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (307)
Q Consensus 190 GllDal~~~L----~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Gliv 252 (307)
.++-.+..++ .+.+..++++....+.+..--++++++++++++...+..|++|++++++|+++
T Consensus 279 i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l 345 (350)
T PTZ00343 279 IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL 345 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence 3334444444 44588899999999999999999999999999999999999999999999864
No 48
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=94.33 E-value=0.17 Score=43.12 Aligned_cols=116 Identities=15% Similarity=0.115 Sum_probs=70.7
Q ss_pred HHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCCccchHhh-HHHHHHH
Q 021784 119 IAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVG-LLEALAA 197 (307)
Q Consensus 119 i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk~kfli~G-llDal~~ 197 (307)
+++++-+++++.-.++.|.-.+++++-+.....+. .... .. -| ..+++.| .+-+++-
T Consensus 5 ~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~~~-~~~~----------~~----------~p-~~~i~lgl~~~~la~ 62 (129)
T PRK02971 5 LWGLASVLLASVAQLSLKWGMSRLPLLSHAWDFIA-ALLA----------FG----------LA-LRAVLLGLAGYALSM 62 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCccchhHHHH-HHHH----------Hh----------cc-HHHHHHHHHHHHHHH
Confidence 45666677788889999999887765432221100 0000 00 00 0123333 3345555
Q ss_pred HHHHhhhccccccHHHHhccchHHHHHHHHHH--HhcccccccccchhhheeeceeeEeec
Q 021784 198 ATGMAAGAILSGASIPILSQTFLVWQILLSII--FLGRRYRVNQLFGCFLVGIGVIITVAS 256 (307)
Q Consensus 198 ~L~viA~~ytsgs~~~LL~q~~IP~tmllS~i--fLk~RY~~~qi~G~~IVl~Glivvv~s 256 (307)
++-..+....|.+...-+......+++++++. +++.+.+..|++|+.++++|++++..+
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 56666666666665544433444566667764 899999999999999999999886543
No 49
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=94.30 E-value=0.13 Score=48.12 Aligned_cols=93 Identities=17% Similarity=0.161 Sum_probs=78.5
Q ss_pred HHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCCCCCCCcchHHHH
Q 021784 194 ALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSL 273 (307)
Q Consensus 194 al~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g~s~~~~~vlw~l 273 (307)
..+||+-..|+.-.+++...-+.+..-.|+-+++++.||.|+...+++.+++.+.|+++....|.. -..++++..
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~-----~a~e~iGi~ 138 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE-----HADEIIGIA 138 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch-----hhhhhhhHH
Confidence 348999999999999999999999999999999999999999999999999999999988766421 135788888
Q ss_pred HHHHHhhHHHHHHHHHHH
Q 021784 274 LMIVSFLLQAADTVLKEV 291 (307)
Q Consensus 274 L~llS~ip~AlSnV~kE~ 291 (307)
..+.|+...|+--|.=..
T Consensus 139 ~AV~SA~~aAlYKV~FK~ 156 (290)
T KOG4314|consen 139 CAVGSAFMAALYKVLFKM 156 (290)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888887776555433
No 50
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=94.21 E-value=0.019 Score=54.01 Aligned_cols=72 Identities=15% Similarity=0.233 Sum_probs=64.8
Q ss_pred chHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecC
Q 021784 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (307)
Q Consensus 186 fli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sg 257 (307)
++..|..-+.+..+.+.|+++.+.+...++.-...++..++++++++.+.+..|++|+.++++|+.+...++
T Consensus 216 ~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~ 287 (296)
T PRK15430 216 LIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA 287 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 334577788999999999999999999999999999999999999999999999999999998888766553
No 51
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=93.73 E-value=0.046 Score=51.69 Aligned_cols=72 Identities=19% Similarity=0.140 Sum_probs=65.2
Q ss_pred ccchHhhHHHHHHHHHHHhhhc-cccccHHHHhccchHHHHHHHHHHHhccccccccc----chhhheeeceeeEee
Q 021784 184 APFVAVGLLEALAAATGMAAGA-ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL----FGCFLVGIGVIITVA 255 (307)
Q Consensus 184 ~kfli~GllDal~~~L~viA~~-ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi----~G~~IVl~Glivvv~ 255 (307)
|+-++.|++-..++.+.+.+.+ +.+.+...++.|.-.+...+++++++|++.+..|+ +|+++++.|+++...
T Consensus 212 ~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 212 LLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 4566689888999999999999 99999999999999999999999999999999999 999999999877643
No 52
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=93.59 E-value=0.079 Score=44.65 Aligned_cols=71 Identities=15% Similarity=0.109 Sum_probs=63.2
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccHH-HHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEe
Q 021784 184 APFVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (307)
Q Consensus 184 ~kfli~GllDal~~~L~viA~~ytsgs~~-~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv 254 (307)
|+|+++=++..+|.++-+.....++.++. ++-|.....+|.+..+++-++.-+...++|+.+++.|+.+++
T Consensus 42 ~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lcv 113 (113)
T PF10639_consen 42 PKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALCV 113 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeeeC
Confidence 68999889999999999999999999986 566899999999999887777778888999999999998863
No 53
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=93.32 E-value=0.058 Score=50.56 Aligned_cols=68 Identities=12% Similarity=0.026 Sum_probs=59.7
Q ss_pred chHhhHH-HHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeE
Q 021784 186 FVAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (307)
Q Consensus 186 fli~Gll-Dal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivv 253 (307)
.+.+|++ -+.+..+.+.+.++.+.+...++.....++.+++++++++++.+..|++|+++++.|+++.
T Consensus 215 i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~ 283 (292)
T PRK11272 215 LGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV 283 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence 3445554 5677778888999999999999999999999999999999999999999999999998764
No 54
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=92.67 E-value=0.19 Score=47.07 Aligned_cols=57 Identities=21% Similarity=0.227 Sum_probs=50.1
Q ss_pred HHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEe
Q 021784 198 ATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (307)
Q Consensus 198 ~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv 254 (307)
.+.+.+..++++....++...--++++++++++++++.+..|++|..++++|+.+.-
T Consensus 236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 455567889999999999888888888999999999999999999999999987644
No 55
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=92.40 E-value=0.1 Score=44.20 Aligned_cols=73 Identities=10% Similarity=0.139 Sum_probs=59.8
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccH-HHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeec
Q 021784 184 APFVAVGLLEALAAATGMAAGAILSGAS-IPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (307)
Q Consensus 184 ~kfli~GllDal~~~L~viA~~ytsgs~-~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~s 256 (307)
+++++.-.+=+++-++...+..+.|.+. +.+....-+..+.+++++|++.+.+..|++|..++++|+++.-..
T Consensus 31 ~~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 31 GGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 3455566666777777778888888776 466678889999999999999999999999999999999877554
No 56
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=91.62 E-value=0.9 Score=42.69 Aligned_cols=71 Identities=15% Similarity=0.128 Sum_probs=57.6
Q ss_pred chHhhHH-HHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeec
Q 021784 186 FVAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (307)
Q Consensus 186 fli~Gll-Dal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~s 256 (307)
.+.+|++ -+.+-.+.+.+.++.++....++.....++.+++++++|+.+.+..|++|+.++++|+.+...+
T Consensus 217 l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 217 LMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 3445543 4455566667778888888888888888999999999999999999999999999999876554
No 57
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=89.49 E-value=0.98 Score=43.34 Aligned_cols=70 Identities=23% Similarity=0.203 Sum_probs=59.8
Q ss_pred CccchHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccc----cchhhheeeceee
Q 021784 183 KAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQ----LFGCFLVGIGVII 252 (307)
Q Consensus 183 k~kfli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~q----i~G~~IVl~Gliv 252 (307)
.|+=++-|++-..+|++..++.+......---|+|..+..+.+...++||.+=+..| ++|++++++|.++
T Consensus 195 ~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 195 SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 467788999999999999999999999999999999999999999999998755444 4677777777654
No 58
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=88.99 E-value=3.4 Score=38.58 Aligned_cols=131 Identities=13% Similarity=0.113 Sum_probs=84.2
Q ss_pred cchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCC--ccchHhh
Q 021784 113 RRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPK--APFVAVG 190 (307)
Q Consensus 113 ~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk--~kfli~G 190 (307)
.-+.+...++..++.|.+....-|++-.+- -|.+.-.++-+.|=.++..+.........+.++. -+.. +..+++-
T Consensus 112 ~~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g-~f~G~~~~~~~~i 188 (244)
T PF04142_consen 112 PLLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGSAISESG-FFHGYSWWVWIVI 188 (244)
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhcccccccccCC-chhhcchHHHHHH
Confidence 344555556666777888877778755433 4444433332333222222221111111222221 1222 2344566
Q ss_pred HHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhhe
Q 021784 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLV 246 (307)
Q Consensus 191 llDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IV 246 (307)
++-+.+++++.+-..|.+.-.=..-....+..+.++|+++.+.+++..-++|+.+|
T Consensus 189 ~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 189 FLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred HHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 78999999999999999998888899999999999999999999999999998765
No 59
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=87.89 E-value=1.9 Score=40.46 Aligned_cols=149 Identities=15% Similarity=0.151 Sum_probs=106.1
Q ss_pred ccccccchHHHHHHHHHHHhhhhhHHHHHHHhC--CCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchh-hhcCCCc
Q 021784 108 SKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALV--PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDE-MLSMPKA 184 (307)
Q Consensus 108 ~~~~~~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~--~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~e-ml~~Pk~ 184 (307)
|.+....+-=+.+.+.--.+...-+|++|+..- .+++-..|.+.+-.+-.+..+|+-+ ..++++..+.. --..||-
T Consensus 127 DN~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~l-IL~~T~VE~~qsFA~~PWG 205 (290)
T KOG4314|consen 127 DNEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPAL-ILAFTGVEHLQSFAAAPWG 205 (290)
T ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHH-HHHHhchHHHHHHhhCCch
Confidence 334433333333444444455566788887765 3667788887766666666666553 23344432222 1235666
Q ss_pred cchHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecC
Q 021784 185 PFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (307)
Q Consensus 185 kfli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sg 257 (307)
...-++.+-..-|++..+|..-+.+-++.+=.-..||-....-.+|-..-++...+.|..++++|.++.+.|-
T Consensus 206 ~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 206 CLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred hhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 6777888888899999999999999888887778899999999988888889999999999999999999983
No 60
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=87.48 E-value=0.71 Score=38.52 Aligned_cols=69 Identities=12% Similarity=0.006 Sum_probs=58.0
Q ss_pred cchHhhHHHHHHHHHHHhhhccccccH-HHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeE
Q 021784 185 PFVAVGLLEALAAATGMAAGAILSGAS-IPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (307)
Q Consensus 185 kfli~GllDal~~~L~viA~~ytsgs~-~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivv 253 (307)
+.+++-.+=+++-++.-.|.++.|... +.+-...-+..+.+.++++.|.+.+..|++|..++++|++..
T Consensus 37 ~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 37 YGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 345555666777888888888888776 578888889999999999999999999999999999998764
No 61
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=87.13 E-value=3.1 Score=41.01 Aligned_cols=58 Identities=14% Similarity=0.177 Sum_probs=49.7
Q ss_pred HHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeec
Q 021784 199 TGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (307)
Q Consensus 199 L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~s 256 (307)
++-+...+++++..++=.-++.||.+++.+++-|.++++..++|.+++++|+++--..
T Consensus 249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 4445566788887777677889999999999999999999999999999999988764
No 62
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=87.07 E-value=0.52 Score=39.24 Aligned_cols=65 Identities=22% Similarity=0.178 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhhhccccccH-HHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeec
Q 021784 192 LEALAAATGMAAGAILSGAS-IPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (307)
Q Consensus 192 lDal~~~L~viA~~ytsgs~-~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~s 256 (307)
+-+.+-++...+..+.|... +.+....-+..+.++++++++.+.+..|++|..++++|++..-..
T Consensus 39 ~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 34444444555556666655 356667778888999999999999999999999999999876543
No 63
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=85.74 E-value=5.3 Score=40.44 Aligned_cols=82 Identities=13% Similarity=0.195 Sum_probs=69.0
Q ss_pred hhhhcCCCc-c---chHhhHH-HHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeece
Q 021784 176 DEMLSMPKA-P---FVAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGV 250 (307)
Q Consensus 176 ~eml~~Pk~-k---fli~Gll-Dal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Gl 250 (307)
+|..++|.. + .++.|++ -+++.++=.+|.-.|++....+=....||..|+.=.++-++.|+..+++|+..+.+|.
T Consensus 306 ~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~F 385 (416)
T KOG2765|consen 306 EERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGF 385 (416)
T ss_pred cCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 355666753 2 3345554 5678899999999999999999999999999999999999999999999999999999
Q ss_pred eeEeecC
Q 021784 251 IITVASG 257 (307)
Q Consensus 251 ivvv~sg 257 (307)
+++-.++
T Consensus 386 v~vn~~~ 392 (416)
T KOG2765|consen 386 VIVNISS 392 (416)
T ss_pred hheeccc
Confidence 8888774
No 64
>PF12398 DUF3660: Receptor serine/threonine kinase ; InterPro: IPR022126 This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with PF00954 from PFAM, PF01453 from PFAM, PF00069 from PFAM, PF08276 from PFAM. There is a conserved ELPL sequence motif. ; GO: 0004674 protein serine/threonine kinase activity
Probab=82.85 E-value=0.85 Score=32.28 Aligned_cols=30 Identities=27% Similarity=0.226 Sum_probs=23.6
Q ss_pred eeeecccccCCCceEEEecCCccccccCCC
Q 021784 33 YLRDHHANQRLPTTLLFRSSKRNYYHNNSN 62 (307)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (307)
||...++||-||.-=++-||||++|+|+..
T Consensus 3 ~i~~~~RnQ~llmN~~v~sskr~~s~Enk~ 32 (42)
T PF12398_consen 3 PIVNRQRNQDLLMNGMVLSSKRQLSGENKT 32 (42)
T ss_pred ccccccccccccccceEEeccccccccCcc
Confidence 345567899998777788999999998754
No 65
>PF15169 DUF4564: Domain of unknown function (DUF4564)
Probab=82.48 E-value=1.3 Score=40.52 Aligned_cols=60 Identities=20% Similarity=0.341 Sum_probs=46.0
Q ss_pred hccccccccc-chhhheeeceeeEeecCCCCCCCCCCcchHHHHHHHHHhhHHHHHHHH--HHHhhhhhhhh
Q 021784 231 LGRRYRVNQL-FGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVL--KEVIFLDAAQR 299 (307)
Q Consensus 231 Lk~RY~~~qi-~G~~IVl~Glivvv~sgs~~g~s~~~~~vlw~lL~llS~ip~AlSnV~--kE~~fkd~~~~ 299 (307)
|+++.....| +++.++.+|+.....++ ..++|-++++++|++.|++|+= +|.+|.+.+.+
T Consensus 15 Lkrsp~~rsWsl~~gi~siGl~~~yys~---------d~~~wK~fyv~~c~fva~~n~edwee~iFdK~kg~ 77 (187)
T PF15169_consen 15 LKRSPGIRSWSLLVGIASIGLAAAYYSS---------DSLLWKLFYVAGCLFVALQNMEDWEEAIFDKSKGK 77 (187)
T ss_pred EEcCCCccchhhHHHHHhcccceeeecC---------CchHHHHHHHHHHHHHHHhcchhhhheeEeccCCE
Confidence 5677777666 46678888888887773 3579999999999999999996 46667665443
No 66
>PRK11431 multidrug efflux system protein; Provisional
Probab=80.95 E-value=1.3 Score=36.59 Aligned_cols=67 Identities=16% Similarity=0.073 Sum_probs=52.8
Q ss_pred hHhhHHHHHHHHHHHhhhccccccH-HHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeE
Q 021784 187 VAVGLLEALAAATGMAAGAILSGAS-IPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (307)
Q Consensus 187 li~GllDal~~~L~viA~~ytsgs~-~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivv 253 (307)
++.-.+=+.+-++.-.|.+..|... +.+-.+.-+..+.+.++++.|.+.+..|++|..++++|++..
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 3344445566666666777777665 467777888899999999999999999999999999998765
No 67
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=78.43 E-value=10 Score=34.29 Aligned_cols=56 Identities=11% Similarity=0.168 Sum_probs=32.9
Q ss_pred CCccchHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHH---HHHHHhcccccc
Q 021784 182 PKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQIL---LSIIFLGRRYRV 237 (307)
Q Consensus 182 Pk~kfli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tml---lS~ifLk~RY~~ 237 (307)
++|++++++.+=+..=+..+.....+|....+-|+.+......+ .-..++||||+.
T Consensus 145 ~~~k~~~~~~~~~~~w~~~~~~~~~lp~~inp~l~~~~~iiig~i~~~~~~~lkkk~~i 203 (206)
T PF06570_consen 145 SWWKYILISVLAMVLWIVIFVLTSFLPPVINPVLPPWVYIIIGVIAFALRFYLKKKYNI 203 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccCCcCCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 44666666655555555555555557777666666555443333 344578888875
No 68
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=77.75 E-value=3.9 Score=32.58 Aligned_cols=61 Identities=15% Similarity=0.076 Sum_probs=34.6
Q ss_pred chHhhHHHHHHHHHHHhhhccccccHH-HHhccchHHHHHHHHHHHhcccccccccchhhhe
Q 021784 186 FVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLV 246 (307)
Q Consensus 186 fli~GllDal~~~L~viA~~ytsgs~~-~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IV 246 (307)
.+..-.+=..+-++...|..+.|.+.. ++.....+..+.+.+.++.+.+.+..|++|..++
T Consensus 32 ~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 32 TILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp --HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 333333556666777888888888774 7888899999999999999999999999998763
No 69
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=77.19 E-value=2.6 Score=35.30 Aligned_cols=70 Identities=19% Similarity=0.109 Sum_probs=58.2
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccH-HHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeE
Q 021784 184 APFVAVGLLEALAAATGMAAGAILSGAS-IPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (307)
Q Consensus 184 ~kfli~GllDal~~~L~viA~~ytsgs~-~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivv 253 (307)
++.+++-.+=..+=.+.-.|..+.|... +.+-.+.-+.-+.+.++++++.+.+..+++|..++++|++..
T Consensus 31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL 101 (106)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence 5566566666667777777778888766 578889999999999999999999999999999999998754
No 70
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=75.31 E-value=14 Score=31.69 Aligned_cols=72 Identities=24% Similarity=0.370 Sum_probs=50.6
Q ss_pred hhhcCCCccchHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHH--------hcccccccccchhhheee
Q 021784 177 EMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIF--------LGRRYRVNQLFGCFLVGI 248 (307)
Q Consensus 177 eml~~Pk~kfli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~if--------Lk~RY~~~qi~G~~IVl~ 248 (307)
+..+.|||.|+ -|++-+.-.++.....+.+.......+ .+-=+++.|.++ -|++.+..+++|+.++++
T Consensus 59 ~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~~~l---~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~ 134 (138)
T PF04657_consen 59 SLSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALTTIL---IVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIA 134 (138)
T ss_pred hhccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHHHHH---HHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHH
Confidence 34567777666 888888888888888887776655433 223344444443 568899999999999999
Q ss_pred ceee
Q 021784 249 GVII 252 (307)
Q Consensus 249 Gliv 252 (307)
|+++
T Consensus 135 Gv~L 138 (138)
T PF04657_consen 135 GVIL 138 (138)
T ss_pred HHhC
Confidence 9753
No 71
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=73.22 E-value=3.6 Score=34.56 Aligned_cols=48 Identities=21% Similarity=0.263 Sum_probs=42.0
Q ss_pred ccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeec
Q 021784 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (307)
Q Consensus 209 gs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~s 256 (307)
|=...-=.+..|..++++-+.+=|.|+..+.++|+.+|++|+.+....
T Consensus 57 GRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 57 GRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 445566678899999999999999999999999999999999887654
No 72
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=71.06 E-value=20 Score=35.41 Aligned_cols=69 Identities=16% Similarity=0.157 Sum_probs=51.9
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceee
Q 021784 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (307)
Q Consensus 184 ~kfli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Gliv 252 (307)
|-.++.+.|-+.|+.+.+.-...-..........+-=-+++++|.+..+.+.+..||+|+++|..|+..
T Consensus 242 ~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 242 FDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 346678899999999988776644333333333333357889999999999999999999999988754
No 73
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=70.74 E-value=1.9 Score=41.45 Aligned_cols=74 Identities=16% Similarity=0.187 Sum_probs=63.1
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecC
Q 021784 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (307)
Q Consensus 184 ~kfli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sg 257 (307)
|...++|++.++|+.+.+.--.+-.+.--.+...+-=-||++.|.++...-.+..||+|..+|..|+.+.+.-|
T Consensus 242 ~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G 315 (337)
T KOG1580|consen 242 WDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG 315 (337)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence 66788999999999999998887777655666666667999999999999999999999999999998876644
No 74
>PRK13499 rhamnose-proton symporter; Provisional
Probab=69.06 E-value=9.4 Score=37.93 Aligned_cols=100 Identities=19% Similarity=0.056 Sum_probs=73.7
Q ss_pred hHhhHHHHHHHHHHHhhhccccccHH-HHhccchHHHHHHHHHHHhcc-------cccccccchhhheeeceeeEeecCC
Q 021784 187 VAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGR-------RYRVNQLFGCFLVGIGVIITVASGS 258 (307)
Q Consensus 187 li~GllDal~~~L~viA~~ytsgs~~-~LL~q~~IP~tmllS~ifLk~-------RY~~~qi~G~~IVl~Glivvv~sgs 258 (307)
++-|++=..+|++.+.+..|...+.. ++-....+....++-.+++++ +=...=++|++++++|++++...+.
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34678899999999999999998885 455566677777777777652 1113357899999999999888543
Q ss_pred CCCC------CCCCcchHHHHHHHHHhhHHHHHH
Q 021784 259 NPGH------SLKGAGIFWSLLMIVSFLLQAADT 286 (307)
Q Consensus 259 ~~g~------s~~~~~vlw~lL~llS~ip~AlSn 286 (307)
..++ ..+.+.-.+.++.++|.+.++.-+
T Consensus 157 ~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 157 LKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred hcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence 2111 223567888999999999998888
No 75
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=62.43 E-value=6.5 Score=33.07 Aligned_cols=48 Identities=13% Similarity=0.153 Sum_probs=41.5
Q ss_pred ccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeec
Q 021784 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (307)
Q Consensus 209 gs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~s 256 (307)
|-...--.+..|..++++-+..=++|+.++.+.|+.+|++|+.+....
T Consensus 58 GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 58 GRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred hhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 445556678889999999999999999999999999999998877764
No 76
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=61.78 E-value=4.8 Score=39.49 Aligned_cols=68 Identities=16% Similarity=0.205 Sum_probs=54.0
Q ss_pred cchHhhHHHHHH---HHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceee
Q 021784 185 PFVAVGLLEALA---AATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (307)
Q Consensus 185 kfli~GllDal~---~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Gliv 252 (307)
.+..+.+.++++ |...+....+|++...+++++.-=.+.++.|+++++++.+..|.+|..+.++|+.+
T Consensus 234 ~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~ 304 (316)
T KOG1441|consen 234 TFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFL 304 (316)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHH
Confidence 355555555444 55566666699999999999888888888898999998889999999999998764
No 77
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=61.16 E-value=24 Score=33.88 Aligned_cols=157 Identities=13% Similarity=0.167 Sum_probs=92.2
Q ss_pred HHHHHHhhhhhHHHHHHHhCC-CCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHHHHHH
Q 021784 121 AAVTVLLGVGNRVLYKLALVP-LKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAAT 199 (307)
Q Consensus 121 ~i~~Vi~Gv~N~Vl~Kl~~~~-~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk~kfli~GllDal~~~L 199 (307)
++.+......-++.-|....- -.|-.|.+-..++.++++--...-..|+ +.-+..++ ++.+.+.++-+.--+-
T Consensus 11 ~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~----~~fR~t~a--K~WfpiSfLLv~MIyt 84 (309)
T COG5070 11 SLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRL----VEFRLTKA--KKWFPISFLLVVMIYT 84 (309)
T ss_pred HHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhH----hheehhhh--hhhcCHHHHHHHHHHh
Confidence 344444455555566666553 3355555555666555532211111121 00011112 2345578887777888
Q ss_pred HHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCCCC---CCCCCcchHHHHHHH
Q 021784 200 GMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPG---HSLKGAGIFWSLLMI 276 (307)
Q Consensus 200 ~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~~g---~s~~~~~vlw~lL~l 276 (307)
.-.+++|++.++..+.-..+|......=..|.|.|.+-.+...-.+.++.-++.-.+|-.+. +..-..+.+|+..-+
T Consensus 85 ~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~Nc 164 (309)
T COG5070 85 SSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNC 164 (309)
T ss_pred cccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhh
Confidence 88999999999999999999999999999999999888877776655544333322221100 001134567766655
Q ss_pred HHhhHHH
Q 021784 277 VSFLLQA 283 (307)
Q Consensus 277 lS~ip~A 283 (307)
++...+-
T Consensus 165 lssaafV 171 (309)
T COG5070 165 LSSAAFV 171 (309)
T ss_pred HhHHHHH
Confidence 5554433
No 78
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=60.25 E-value=38 Score=32.64 Aligned_cols=106 Identities=18% Similarity=0.128 Sum_probs=77.0
Q ss_pred cchHhhHHHHHHHHHHHhhhccccccHHHHh-ccchHHHHHHHHHHHhcccccccccc----hhhheeeceeeEeecCCC
Q 021784 185 PFVAVGLLEALAAATGMAAGAILSGASIPIL-SQTFLVWQILLSIIFLGRRYRVNQLF----GCFLVGIGVIITVASGSN 259 (307)
Q Consensus 185 kfli~GllDal~~~L~viA~~ytsgs~~~LL-~q~~IP~tmllS~ifLk~RY~~~qi~----G~~IVl~Glivvv~sgs~ 259 (307)
.-++-|++=++++..++.+..+...+...-+ ...-++.+.++..++++.--+..+++ +.+++++|+.+....+.+
T Consensus 47 ~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~ 126 (269)
T PF06800_consen 47 VAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKK 126 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccc
Confidence 3456788999999999999998888876444 46668889999999999966655554 677888888888777544
Q ss_pred CCCC-CCCcchHHHHHHHHHhhHHHHHHHHHH
Q 021784 260 PGHS-LKGAGIFWSLLMIVSFLLQAADTVLKE 290 (307)
Q Consensus 260 ~g~s-~~~~~vlw~lL~llS~ip~AlSnV~kE 290 (307)
+++. ...+...+.+..++|++-|-+=.+.-.
T Consensus 127 ~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~ 158 (269)
T PF06800_consen 127 SDKSSSKSNMKKGILALLISTIGYWIYSVIPK 158 (269)
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 3321 234556677777888777766555543
No 79
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=58.04 E-value=22 Score=35.02 Aligned_cols=118 Identities=14% Similarity=0.115 Sum_probs=81.6
Q ss_pred hhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCC---ccchHhhHHHHHHHHHHHhhh
Q 021784 128 GVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPK---APFVAVGLLEALAAATGMAAG 204 (307)
Q Consensus 128 Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk---~kfli~GllDal~~~L~viA~ 204 (307)
-..|.|..|....|..+--|-++..+|...++.|.+.+...... ++...+|+ ++|.++=.+..+-++.+.++-
T Consensus 197 vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~----~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvT 272 (347)
T KOG1442|consen 197 VALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEF----QAVVGFPHLPAIKFWILMTLSGLFGFAMGYVT 272 (347)
T ss_pred HHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchH----HHHcCcccchHHHHHHHHHHHHHHHHHhhhee
Confidence 35799999998889999999999999988888888776664222 23344444 677776666665555554443
Q ss_pred c----cccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeec
Q 021784 205 A----ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIG 249 (307)
Q Consensus 205 ~----ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~G 249 (307)
. .||+.--++=..+--..+-++...+++.--+...|.|.++|++|
T Consensus 273 g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvg 321 (347)
T KOG1442|consen 273 GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVG 321 (347)
T ss_pred eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEeh
Confidence 2 45554444444444556777888888887788888888777765
No 80
>PF04973 NMN_transporter: Nicotinamide mononucleotide transporter; InterPro: IPR006419 The PnuC protein of Escherichia coli is membrane protein responsible for nicotinamide mononucleotide transport, subject to regulation by interaction with the NadR (also called NadI) protein (see IPR006417 from INTERPRO). The extreme N- and C-terminal regions are poorly conserved. ; GO: 0006810 transport, 0016020 membrane
Probab=55.26 E-value=66 Score=28.34 Aligned_cols=106 Identities=15% Similarity=0.128 Sum_probs=48.1
Q ss_pred hhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHHHHHHHHhhhcc
Q 021784 127 LGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAI 206 (307)
Q Consensus 127 ~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~r~~~~~it~eml~~Pk~kfli~GllDal~~~L~viA~~y 206 (307)
+|..+.++|=...-..+.|.-...|+..+. .-+|.-+...|.+.+.-..+.+.++++..+..-.+=+.+......-...
T Consensus 28 ~giis~~~y~~i~~~~~ly~~~~lq~~~~~-~~i~G~~~W~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 106 (181)
T PF04973_consen 28 FGIISSLLYAYIFYQAGLYGDMLLQLFYFI-MSIYGWYQWKKGRDENDEVKVRRLSKKQWILLLIGILIGTAIFGFILKF 106 (181)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHHHHHHHHHhhhccCcccceeeCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666666666666666666644433 3344333223222111011122333322222222222222222222334
Q ss_pred ccccHHHHhccchHHHHHHHHHHHhcc
Q 021784 207 LSGASIPILSQTFLVWQILLSIIFLGR 233 (307)
Q Consensus 207 tsgs~~~LL~q~~IP~tmllS~ifLk~ 233 (307)
...+-.+.++-.+...+++-.++.-||
T Consensus 107 ~~~~~~~~~Da~~~~~siva~~l~~~k 133 (181)
T PF04973_consen 107 LTDSPFPWLDALTTVLSIVAQWLMARK 133 (181)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 444555788887777777666665444
No 81
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=54.91 E-value=10 Score=32.30 Aligned_cols=72 Identities=13% Similarity=0.092 Sum_probs=54.5
Q ss_pred CccchHhhHHHHHHHHHHHhhhccccccHH-HHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEe
Q 021784 183 KAPFVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (307)
Q Consensus 183 k~kfli~GllDal~~~L~viA~~ytsgs~~-~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv 254 (307)
.|.|.++=++.-++..+-+.-++++|.++. ++-+-..+.||.+.-+..=.+---..-++|..+++.|+.+++
T Consensus 52 ~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 52 NWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 478999999999999999999999999885 566666778887776644333344556778888877776654
No 82
>PRK02237 hypothetical protein; Provisional
Probab=51.99 E-value=6.1 Score=33.32 Aligned_cols=47 Identities=13% Similarity=0.179 Sum_probs=40.9
Q ss_pred ccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEee
Q 021784 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (307)
Q Consensus 209 gs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~ 255 (307)
|=...-=.+..|..++++-+.+=+.|++.+.++|+.+|++|+.+...
T Consensus 59 GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 59 GRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 44566677889999999999999999999999999999999976644
No 83
>PRK13499 rhamnose-proton symporter; Provisional
Probab=48.17 E-value=1.1e+02 Score=30.55 Aligned_cols=67 Identities=13% Similarity=0.100 Sum_probs=48.2
Q ss_pred hHhhHHHHHHHHHHHhhhcccccc----HHHHhccchHHHHHHHHHHHhccccc------ccccchhhheeeceeeEe
Q 021784 187 VAVGLLEALAAATGMAAGAILSGA----SIPILSQTFLVWQILLSIIFLGRRYR------VNQLFGCFLVGIGVIITV 254 (307)
Q Consensus 187 li~GllDal~~~L~viA~~ytsgs----~~~LL~q~~IP~tmllS~ifLk~RY~------~~qi~G~~IVl~Glivvv 254 (307)
++.|++-..++++..+|....+.. ++.+.+|..+.+..++..+ ||.+=+ ..-++|++++++|.++..
T Consensus 264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig 340 (345)
T PRK13499 264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLV-LKEWKGASRRPVRVLSLGCVVIILAANIVG 340 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhh-hhhccCCCccchhHHHHHHHHHHHHHHHHh
Confidence 668888999999999988766333 6677789999999999994 776433 444566666666655543
No 84
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=47.88 E-value=1e+02 Score=28.86 Aligned_cols=62 Identities=19% Similarity=0.161 Sum_probs=44.9
Q ss_pred hhcCCCccchHhhHHHHHHHHHHHhhhccccccHHHHhccchHH---HHHHHHHHHhcccccccc
Q 021784 178 MLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLV---WQILLSIIFLGRRYRVNQ 239 (307)
Q Consensus 178 ml~~Pk~kfli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP---~tmllS~ifLk~RY~~~q 239 (307)
-+.-++||+++...+-++-=.+++++...+|.++.+-|.-.... -..+---+.||||++...
T Consensus 156 sqr~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~~L~pi~l~IiGav~lalRfylkkk~NIqs 220 (226)
T COG4858 156 SQRPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNPQLPPIALTIIGAVILALRFYLKKKKNIQS 220 (226)
T ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCcCCchHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 34456689999999999888999999999999988776644322 223334456888887643
No 85
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=47.39 E-value=16 Score=35.93 Aligned_cols=68 Identities=16% Similarity=0.265 Sum_probs=57.7
Q ss_pred CccchHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeece
Q 021784 183 KAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGV 250 (307)
Q Consensus 183 k~kfli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Gl 250 (307)
+|.|..+|..-..++++...|.+.--.-=..++..+-+++..+|=.+|.+.-+++|.|+|+++++...
T Consensus 253 r~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~ 320 (346)
T KOG4510|consen 253 RWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSST 320 (346)
T ss_pred eEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhH
Confidence 46678899999999999999999665555567888889999999999999999999999997766533
No 86
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=44.54 E-value=1.2e+02 Score=30.53 Aligned_cols=139 Identities=12% Similarity=0.062 Sum_probs=88.5
Q ss_pred ccchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHH-HHHHHhcCccchhhhcCCCc--cchH
Q 021784 112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSI-LYLRYHAGIVTDEMLSMPKA--PFVA 188 (307)
Q Consensus 112 ~~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~I-l~~r~~~~~it~eml~~Pk~--kfli 188 (307)
+.-+.....+...++.|-+..-+-|+.-. -..--|-.|-... .| .+.|.. ..+......+. +.--|.+| .-++
T Consensus 180 n~~~G~~avl~~c~~SgfAgvYfEkiLK~-s~~s~wi~NiqL~-~~-g~~f~~l~~~~~d~~~i~-~~gff~G~s~~vw~ 255 (345)
T KOG2234|consen 180 NPFLGLVAVLVACFLSGFAGVYFEKILKG-SNVSLWIRNIQLY-FF-GILFNLLTILLQDGEAIN-EYGFFYGYSSIVWL 255 (345)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHhc-CCchHHHHHHHHH-HH-HHHHHHHHHhhccccccc-cCCccccccHHHHH
Confidence 44455666677778888888888887533 2222233333221 11 122211 12222111122 11112222 2344
Q ss_pred hhHHHHHHHHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEe
Q 021784 189 VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (307)
Q Consensus 189 ~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv 254 (307)
+=+.-+.+++++-+-..|.+.-+=..-....|.++.+.|+.+...+.+..=++|+.+|+..+.+-.
T Consensus 256 vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~ 321 (345)
T KOG2234|consen 256 VVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYS 321 (345)
T ss_pred HHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhh
Confidence 567788999998888888888777777788999999999999999999999999999998887755
No 87
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=41.14 E-value=2.1e+02 Score=29.02 Aligned_cols=50 Identities=24% Similarity=0.283 Sum_probs=28.0
Q ss_pred HHHHhcccccccc---cchhhheeeceeeEeec----CCCC----CCCCCCcchHHHHHHH
Q 021784 227 SIIFLGRRYRVNQ---LFGCFLVGIGVIITVAS----GSNP----GHSLKGAGIFWSLLMI 276 (307)
Q Consensus 227 S~ifLk~RY~~~q---i~G~~IVl~Glivvv~s----gs~~----g~s~~~~~vlw~lL~l 276 (307)
-+.+|.+||..+- +++++...+|+++.... .-.+ +........+|++|++
T Consensus 233 Vw~Llqprdyl~~~~L~~~~~~~~igli~~~~~i~~p~~~~~~~~~~~p~~~~pl~P~LFI 293 (376)
T PF02554_consen 233 VWKLLQPRDYLNGFLLIGMLIGLVIGLIIGGPTIQMPAFTSFAVNGNGPAGGGPLFPFLFI 293 (376)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHheeecCCCcCcchhhhhhhhccCCCcCCCCHHHHHH
Confidence 3457899987654 45556666676664321 1000 1112256788987775
No 88
>COG0805 TatC Sec-independent protein secretion pathway component TatC [Intracellular trafficking and secretion]
Probab=40.39 E-value=2.1e+02 Score=27.40 Aligned_cols=95 Identities=22% Similarity=0.223 Sum_probs=56.5
Q ss_pred ccccccchHHHHHHHHHHHhhhhhHHHHHHHhCC----------------CCChhHHHHHHhh-hhhHHHHH--HHH-HH
Q 021784 108 SKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVP----------------LKHYPFFLAQLAT-FGYVAVYF--SIL-YL 167 (307)
Q Consensus 108 ~~~~~~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~----------------~~nYp~Fl~q~~t-~~yv~vyf--~Il-~~ 167 (307)
--.+.|.....+.....+++-.+....|+...-- +..-.-+++.+.+ ++...+.| +++ ..
T Consensus 102 Ly~~Err~~~~~~~~s~~LF~~G~~faYfvv~P~~~~F~~~~~~~~~~~~~~~i~~y~~f~l~l~~~FGv~FElPvv~~~ 181 (255)
T COG0805 102 LYKHERRLILPLLIPSFVLFLLGAAFAYFVVFPLVFKFLLSFAAPDGVSPALSISKYLSFVLTLLLAFGVAFELPVVIVL 181 (255)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceeeeecHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666777777777777777777777776521 1112222222222 22223333 444 33
Q ss_pred HHhcCccchhhhcCCCccchHhhHHHHHHHHHHHhhhccccccH
Q 021784 168 RYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGAS 211 (307)
Q Consensus 168 r~~~~~it~eml~~Pk~kfli~GllDal~~~L~viA~~ytsgs~ 211 (307)
..+.|.++.|.++ .+|||+++++ .++|...||+..
T Consensus 182 L~~~Giv~~~~L~-~~rr~~iv~~--------fViaaviTPpd~ 216 (255)
T COG0805 182 LTRLGIVTPETLK-KKRRYAIVAA--------FVIAAIITPPDV 216 (255)
T ss_pred HHHcCCccHHHHH-HcCCeeeehH--------HHHHHHcCCCch
Confidence 4678888888776 6799999884 466667777544
No 89
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=40.08 E-value=31 Score=33.79 Aligned_cols=78 Identities=21% Similarity=0.086 Sum_probs=54.0
Q ss_pred hhcCCCc-cchHhhHHHHHHHHHHHhhhccccccHHHHhccchHHHH-HHHHHHHhcccccccccchhhheeeceeeEee
Q 021784 178 MLSMPKA-PFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQ-ILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (307)
Q Consensus 178 ml~~Pk~-kfli~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~t-mllS~ifLk~RY~~~qi~G~~IVl~Glivvv~ 255 (307)
.++-|+. -.++++.++...|-..++=+..-.-.+-.=|.-.+-|.. +++-.+|||.|.+..|++.+.+..+||.+...
T Consensus 65 ~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 65 LLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 3444542 345577778878877766555443444445555556654 55678899999999999999999999977654
No 90
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=34.24 E-value=1.4e+02 Score=28.57 Aligned_cols=121 Identities=13% Similarity=-0.019 Sum_probs=75.4
Q ss_pred ccchHhh-HHHHHHHHHHHhhhccccccHHHHhccchH-HHHHHHHHH-H--hcc---cccccccchhhheeeceeeEee
Q 021784 184 APFVAVG-LLEALAAATGMAAGAILSGASIPILSQTFL-VWQILLSII-F--LGR---RYRVNQLFGCFLVGIGVIITVA 255 (307)
Q Consensus 184 ~kfli~G-llDal~~~L~viA~~ytsgs~~~LL~q~~I-P~tmllS~i-f--Lk~---RY~~~qi~G~~IVl~Glivvv~ 255 (307)
++++++| ++=+.||++.+.........+-+++=.++- ..-...+.+ + +++ +-....++|++++++|.++-..
T Consensus 55 ~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f 134 (254)
T PF07857_consen 55 YPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF 134 (254)
T ss_pred eeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence 6677776 888999999988887777777666655432 222222222 1 222 3457789999999998876665
Q ss_pred c--CC-----------------C---CC------CCC------CCcchHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhcc
Q 021784 256 S--GS-----------------N---PG------HSL------KGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLK 301 (307)
Q Consensus 256 s--gs-----------------~---~g------~s~------~~~~vlw~lL~llS~ip~AlSnV~kE~~fkd~~~~l~ 301 (307)
. .. + +. .+. ..+.+++.++-+++-++++...+=-++ .+|..+.-.
T Consensus 135 ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Y-i~~~~~~y~ 213 (254)
T PF07857_consen 135 IKSEEKEPKKSSEETPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIY-IQDHPDIYP 213 (254)
T ss_pred ecCCCCCccccccccccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHH-HHhCccccC
Confidence 1 00 0 00 000 015788999999999999988887766 444443333
Q ss_pred cccC
Q 021784 302 VCLV 305 (307)
Q Consensus 302 g~~~ 305 (307)
|.+.
T Consensus 214 ~as~ 217 (254)
T PF07857_consen 214 GASQ 217 (254)
T ss_pred CCCC
Confidence 4443
No 91
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=31.42 E-value=34 Score=33.23 Aligned_cols=55 Identities=20% Similarity=0.095 Sum_probs=47.0
Q ss_pred HHHHHhhhccccccHHHHhccchHHHHHHHHHHHhcccccccccchhhheeecee
Q 021784 197 AATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVI 251 (307)
Q Consensus 197 ~~L~viA~~ytsgs~~~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Gli 251 (307)
-.+-++|..+.|...+.+|...--.+-.+.-++||+.+.+..||+|...|+.+..
T Consensus 224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 3467889999999999999887777778888999999999999999988776543
No 92
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=26.06 E-value=43 Score=33.08 Aligned_cols=76 Identities=24% Similarity=0.302 Sum_probs=55.0
Q ss_pred ccchHhhHHHHHHHHHHH---hhhccccccHH-HHhccchHHHHHHHHHHHhcccccccccchhhheeeceeeEeecCCC
Q 021784 184 APFVAVGLLEALAAATGM---AAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSN 259 (307)
Q Consensus 184 ~kfli~GllDal~~~L~v---iA~~ytsgs~~-~LL~q~~IP~tmllS~ifLk~RY~~~qi~G~~IVl~Glivvv~sgs~ 259 (307)
|+-.-.+++.+++++++. .+.....|... ......-=-.|+++|+++..|-++..+.-|-++|+.|+.+-+.|..+
T Consensus 257 ~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 257 VRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred HhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence 333446677777777653 34444444433 34444455689999999999999999999999999999999998643
No 93
>COG1113 AnsP Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]
Probab=25.89 E-value=6.1e+02 Score=26.56 Aligned_cols=44 Identities=25% Similarity=0.314 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhhHHHHHHHHHH
Q 021784 117 IVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYL 167 (307)
Q Consensus 117 v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~yv~vyf~Il~~ 167 (307)
+.+.++++++.-..|-+.-+...+ +++...+++++.+|..|++.
T Consensus 339 i~~s~~~~~~~V~Lny~~P~~vF~-------~v~s~s~~~~l~vW~~I~~s 382 (462)
T COG1113 339 ILLSAVVLLLGVVLNYILPEKVFE-------LVTSSSGLGLLFVWLMILLS 382 (462)
T ss_pred HHHHHHHHHHHHHHHhhcchhHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 344444444444455444322221 34455667788888766643
No 94
>COG1966 CstA Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms]
Probab=25.77 E-value=5.5e+02 Score=27.61 Aligned_cols=39 Identities=15% Similarity=0.148 Sum_probs=21.4
Q ss_pred cchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHH
Q 021784 113 RRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQ 151 (307)
Q Consensus 113 ~~~~v~i~~i~~Vi~Gv~N~Vl~Kl~~~~~~nYp~Fl~q 151 (307)
+..+....+..++++=..+.|+.-...+-+.+.||=...
T Consensus 126 ~~a~~~~~~~~l~iliiv~Avfa~vv~~~l~~~p~~~f~ 164 (575)
T COG1966 126 RTAKVFFLLLALILLILVGAVFAAVIAKLLANSPWGVFT 164 (575)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHH
Confidence 444555544444444455556555555556677765444
No 95
>TIGR01528 NMN_trans_PnuC nicotinamide mononucleotide transporter PnuC. The PnuC protein of E. coli is membrane protein responsible for nicotinamide mononucleotide transport, subject to regulation by interaction with the NadR (also called NadI) protein (see TIGR01526). This model defines a region corresponding to most of the length of PnuC, found primarily in pathogens. The extreme N- and C-terminal regions are poorly conserved and not included in the alignment and model.
Probab=24.95 E-value=83 Score=28.27 Aligned_cols=24 Identities=25% Similarity=0.405 Sum_probs=18.4
Q ss_pred HHHHhccchHHHHHHHHHHHhccc
Q 021784 211 SIPILSQTFLVWQILLSIIFLGRR 234 (307)
Q Consensus 211 ~~~LL~q~~IP~tmllS~ifLk~R 234 (307)
..+.++-.+...+++-.++.-||+
T Consensus 114 ~~p~~Da~~t~~Siva~~l~~~k~ 137 (189)
T TIGR01528 114 NFPWLDSITFVIGIVAQILMVRRY 137 (189)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHH
Confidence 458888888888888887766554
No 96
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=23.89 E-value=1.1e+02 Score=30.32 Aligned_cols=32 Identities=25% Similarity=0.442 Sum_probs=28.2
Q ss_pred HHHHHHHHHhcccccccccchhhheeeceeeE
Q 021784 222 WQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (307)
Q Consensus 222 ~tmllS~ifLk~RY~~~qi~G~~IVl~Glivv 253 (307)
+++++|.+..+--++.+||+|+.+|.+|-++-
T Consensus 281 vSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~f 312 (330)
T KOG1583|consen 281 VSLLFSIIYFENPFTPWHWLGAALVFFGTLLF 312 (330)
T ss_pred HHHhheeeEecCCCCHHHHHHHHHHHHHHHHH
Confidence 57889999999999999999999999987653
No 97
>PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases. Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates.; GO: 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides, 0006672 ceramide metabolic process, 0016021 integral to membrane
Probab=23.55 E-value=2.9e+02 Score=25.68 Aligned_cols=51 Identities=24% Similarity=0.255 Sum_probs=33.1
Q ss_pred cccccHHHHhccchHH-HHHHHHHHHhcccc---cccccchhhheeeceeeEeec
Q 021784 206 ILSGASIPILSQTFLV-WQILLSIIFLGRRY---RVNQLFGCFLVGIGVIITVAS 256 (307)
Q Consensus 206 ytsgs~~~LL~q~~IP-~tmllS~ifLk~RY---~~~qi~G~~IVl~Glivvv~s 256 (307)
-|.-.-.|++|-.-+. .++++-+.++.+|+ .....++..+...++++++..
T Consensus 75 aTl~~~~ql~DelPMl~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~t~~~ 129 (262)
T PF05875_consen 75 ATLSYWTQLLDELPMLWATLLFLYIVLTRRYSSPRYRLALPLLLFIYAVVVTVLY 129 (262)
T ss_pred hChhhhHHHhhhhhHHHHHHHHHHHHhcccccCchhhHHHHHHHHHHHHHHHHHH
Confidence 3555567899976665 44556666677766 455667777777776665543
No 98
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=22.14 E-value=57 Score=24.11 Aligned_cols=20 Identities=30% Similarity=0.476 Sum_probs=17.3
Q ss_pred cccchhhheeeceeeEeecC
Q 021784 238 NQLFGCFLVGIGVIITVASG 257 (307)
Q Consensus 238 ~qi~G~~IVl~Glivvv~sg 257 (307)
...+|..++++|+++...||
T Consensus 4 v~v~G~~lv~~Gii~~~lPG 23 (53)
T PF09656_consen 4 VGVLGWVLVVAGIIMLPLPG 23 (53)
T ss_pred hhhHHHHHHHHHHHhhcCCC
Confidence 35689999999999999995
Done!