Query 021787
Match_columns 307
No_of_seqs 307 out of 2056
Neff 7.9
Searched_HMMs 13730
Date Mon Mar 25 09:18:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021787.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021787hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1d2ta_ a.111.1.1 (A:) Bacteri 99.7 2.9E-17 2.1E-21 142.1 7.7 99 112-239 103-201 (224)
2 d1vnsa_ a.111.1.3 (A:) Chlorop 97.1 0.0012 8.5E-08 62.9 10.5 118 110-233 342-505 (574)
3 d1qi9a_ a.111.1.2 (A:) Haloper 93.9 0.086 6.3E-06 48.4 8.6 85 158-242 408-506 (555)
4 d1qhba_ a.111.1.2 (A:) Haloper 92.7 0.31 2.2E-05 45.0 10.3 86 158-243 475-572 (595)
5 d2axte1 f.23.38.1 (E:3-84) Cyt 13.5 1.2E+02 0.0089 19.4 4.1 14 115-128 39-52 (82)
6 d1wyha1 g.39.1.3 (A:35-66) Fou 9.5 41 0.003 17.9 0.5 11 292-302 6-16 (32)
7 d1jb0m_ f.23.19.1 (M:) Subunit 9.0 1.4E+02 0.01 15.3 3.2 20 224-243 6-25 (31)
8 d1v54d_ f.23.1.1 (D:) Mitochon 7.6 3.2E+02 0.024 19.4 5.2 35 95-129 74-108 (144)
9 d1x4ka1 g.39.1.3 (A:35-66) Fou 5.5 83 0.0061 16.6 0.5 10 292-301 6-15 (32)
10 d1hbna1 a.89.1.1 (A:270-549) A 4.6 87 0.0063 25.1 0.3 48 250-302 7-63 (280)
No 1
>d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia blattae [TaxId: 563]}
Probab=99.67 E-value=2.9e-17 Score=142.09 Aligned_cols=99 Identities=26% Similarity=0.259 Sum_probs=70.5
Q ss_pred HHHHHHHhhhCCCCCccccccCCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHHHHhhccccccC
Q 021787 112 VITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDR 191 (307)
Q Consensus 112 ~~~~~lK~~~grpRP~~l~~c~p~~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~l~l~~~~~~~~~ 191 (307)
+.+...|..++|+||+.... ...|..........+.||||||++.+++.+.+++..+..+
T Consensus 103 ~a~~~~K~~~~R~RP~~~~~--------------~~~~~~~~~~~~~~~~SfPSGHa~~a~~~a~~la~~~p~~------ 162 (224)
T d1d2ta_ 103 LATRSAKDHYMRIRPFAFYG--------------VSTCNTTEQDKLSKNGSYPSGHTSIGWATALVLAEINPQR------ 162 (224)
T ss_dssp TTTHHHHHHHCCCCHHHHHT--------------CCCSCC--CCCCCSSCCSSCHHHHHHHHHHHHHHHHCGGG------
T ss_pred HHHHHHHHHHcCCChhhhcC--------------cCCCCccccccCCCCCCcCchhHHHHHHHHHHHHHHhHHH------
Confidence 45678999999999974311 1122221222235678999999999998888877654322
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhCCCCChhHhHHHHHHHHHHHHH
Q 021787 192 RGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFF 239 (307)
Q Consensus 192 ~~~~~~~~l~~~~l~~a~lv~~SRv~~g~H~~sDVl~G~~lG~~~a~~ 239 (307)
+. ..+.++..+|.|||+.|+||+|||++|.++|..++..
T Consensus 163 ----~~-----~~~~~a~~~~~SRv~~g~H~~sDv~aG~~lG~ai~a~ 201 (224)
T d1d2ta_ 163 ----QN-----EILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVAT 201 (224)
T ss_dssp ----HH-----HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred ----HH-----HHHHHHHHhhhHHHHcccccHHHHHHHHHHHHHHHHH
Confidence 11 2245778999999999999999999999999876543
No 2
>d1vnsa_ a.111.1.3 (A:) Chloroperoxidase {Curvularia inaequalis [TaxId: 38902]}
Probab=97.07 E-value=0.0012 Score=62.86 Aligned_cols=118 Identities=18% Similarity=0.089 Sum_probs=70.6
Q ss_pred HHHHHHHHHhhhCCCCCccccccCCC---CCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHHHHhhcc
Q 021787 110 TGVITDAIKDAVGRPRPDFFWRCFPD---GKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKI 186 (307)
Q Consensus 110 ~~~~~~~lK~~~grpRP~~l~~c~p~---~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHas~a~~~~~~l~l~l~~~~ 186 (307)
+.+.+.=.|..+...||...-+.... ....+.+......-+ ........+-.|||||++++.+.+..|..++-...
T Consensus 342 A~IA~Wd~Ky~y~~~RPvTaIR~~~~~~~~d~~W~p~~~~~~~~-~~~~~TPpFPeY~SGHStfS~AaA~VL~~~fG~d~ 420 (574)
T d1vnsa_ 342 AGIFSWKEKWEFEFWRPLSGVRDDGRPDHGDPFWLTLGAPATNT-NDIPFKPPFPAYPSGHATFGGAVFQMVRRYYNGRV 420 (574)
T ss_dssp HHHHHHHHHHHHCBCCHHHHHHTCCCTTTCCTTCCBCCBCCTTS-SCCCBCCSSCCSSCHHHHHHHHHHHHHHHHHBTTT
T ss_pred hHHhhhhccceeeeechhHHHHhcccccCCCCcccccCCccccc-CCCCCCCCCCCCCchhHHHHHHHHHHHHHHhCCCc
Confidence 66778899999999999644332110 011111111000000 01112356789999999999999999998875422
Q ss_pred ccccC-------------------------------------------CchhHHHHHHHHHHHHHHHHHHHHHhCCCCCh
Q 021787 187 RVFDR-------------------------------------------RGHVAKLCIVFLPFLLAALIGVSRVDDYWHHW 223 (307)
Q Consensus 187 ~~~~~-------------------------------------------~~~~~~~~l~~~~l~~a~lv~~SRv~~g~H~~ 223 (307)
-.+.. -.+.+. ..--.+-=.|.||||.|.||-
T Consensus 421 ~~~~~~~~d~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~-----sf~~aa~Ea~~SRiygGIH~r 495 (574)
T d1vnsa_ 421 GTWKDDEPDNIAIDMMISEELNGVNRDLRQPYDPTAPIEDQPGIVRTRIVRHFD-----SAWELMFENAISRIFLGVHWR 495 (574)
T ss_dssp BCCCTTSCCCCCEEEEECGGGSSSCEEESSCCCTTSCGGGSCEEECCCCEEEES-----CHHHHHHHHHHHHHHTTSSCH
T ss_pred cccccccccccccccccchhhccccccccccccccccccccccccCCcceeeec-----CHHHHHHHHHHHHhhcccccc
Confidence 11000 001111 112345678999999999999
Q ss_pred hHhHHHHHHH
Q 021787 224 QDVFGGAIIG 233 (307)
Q Consensus 224 sDVl~G~~lG 233 (307)
.|..+|=-++
T Consensus 496 ~d~~~~~~~~ 505 (574)
T d1vnsa_ 496 FDAAAARDIL 505 (574)
T ss_dssp HHHSCHHHHB
T ss_pred ccchhhHhhc
Confidence 9999998553
No 3
>d1qi9a_ a.111.1.2 (A:) Haloperoxidase (bromoperoxidase) {Ascophyllum nodosum [TaxId: 52969]}
Probab=93.91 E-value=0.086 Score=48.41 Aligned_cols=85 Identities=20% Similarity=0.184 Sum_probs=56.9
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHhhccc--cccC-------Cchh---HHHHHHHHH--HHHHHHHHHHHHhCCCCCh
Q 021787 158 EGHKSFPSGHTSWSFAGLGFLSLYLSGKIR--VFDR-------RGHV---AKLCIVFLP--FLLAALIGVSRVDDYWHHW 223 (307)
Q Consensus 158 ~~~~SFPSGHas~a~~~~~~l~l~l~~~~~--~~~~-------~~~~---~~~~l~~~~--l~~a~lv~~SRv~~g~H~~ 223 (307)
....|||+||++.+-+.++.|-.++..... .+.. +.++ ....+.+-. ==+|.-|++.|-..|+||.
T Consensus 408 PtHPsY~AGHAtvAGA~vTiLKAff~~~~~~~~~~~pv~~~~dg~~L~~y~g~~LTv~GELNKLAaNIaiGR~~aGVH~r 487 (555)
T d1qi9a_ 408 PTHPSYPSGHATQNGAFATVLKALIGLDRGGDCYPDPVYPDDDGLKLIDFRGSCLTFEGEINKLAVNVAFGRQMLGIHYR 487 (555)
T ss_dssp CSSCCSSCHHHHHHHHHHHHHHHHHCHHHHTSBCSSCEEECTTSSSEEECCSSCCBHHHHHHHHHHHHHHHHHHTTSCCH
T ss_pred CCCCCCccchHHHHhHHHHHHHHHhccccccccCCCCcccCCCcccccccCCCCchhHhHHHHHHHHHHhcccccccccc
Confidence 467899999999999999888877643221 1000 0000 000011111 1156789999999999999
Q ss_pred hHhHHHHHHHHHHHHHHHH
Q 021787 224 QDVFGGAIIGTIVSFFCYL 242 (307)
Q Consensus 224 sDVl~G~~lG~~~a~~~~~ 242 (307)
+|-.-|..+|=.+|.-..+
T Consensus 488 sD~~~gl~LGE~iAi~iL~ 506 (555)
T d1qi9a_ 488 FDGIQGLLLGETITVRTLH 506 (555)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhHHhHHHHHHHHHH
Confidence 9999999999999876554
No 4
>d1qhba_ a.111.1.2 (A:) Haloperoxidase (bromoperoxidase) {Red algae (Corallina officinalis) [TaxId: 35170]}
Probab=92.71 E-value=0.31 Score=44.98 Aligned_cols=86 Identities=17% Similarity=0.198 Sum_probs=58.6
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHhhcccccc------CCchhHH---H-HHHHHHH--HHHHHHHHHHHhCCCCChhH
Q 021787 158 EGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFD------RRGHVAK---L-CIVFLPF--LLAALIGVSRVDDYWHHWQD 225 (307)
Q Consensus 158 ~~~~SFPSGHas~a~~~~~~l~l~l~~~~~~~~------~~~~~~~---~-~l~~~~l--~~a~lv~~SRv~~g~H~~sD 225 (307)
....|||+||++.+-+.++.|=.++-.....-+ ....+.. . -+.+-.= =+|.-|++.|-..|+||.+|
T Consensus 475 PtHPsY~AGHAtvAGA~vTiLKAfFd~~~~~~~~~~~~~dg~~lv~~~~~g~LTveGELNKLAaNIaiGRn~aGVHwrsD 554 (595)
T d1qhba_ 475 PFHPSYGSGHAVVAGACVTILKAFFDANFQIDQVFEVDTDEDKLVKSSFPGPLTVAGELNKLADNVAIGRNMAGVHYFSD 554 (595)
T ss_dssp CSSCSSSCHHHHHHHHHHHHHHHHBTTTCEECCCEEECSSSSSEEECSSCCCEEHHHHHHHHHHHHHHHHHHHTSCCHHH
T ss_pred CCCCCccchHHHHHHHHHHHHHHHHccCCcCCCCcccCCCCcceeecCCCcceeehhhHHHHHHHHHhhccccccccccc
Confidence 467899999999999999888887654433200 0000000 0 0111111 15778999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 021787 226 VFGGAIIGTIVSFFCYLQ 243 (307)
Q Consensus 226 Vl~G~~lG~~~a~~~~~~ 243 (307)
-.-|..+|=.+|.-..+.
T Consensus 555 ~~~gl~LGE~iAi~iL~e 572 (595)
T d1qhba_ 555 QFESLLLGEQIAIGILEE 572 (595)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhhHHHHHHHHHH
Confidence 999999999998766553
No 5
>d2axte1 f.23.38.1 (E:3-84) Cytochrome b559 subunit alpha, PsbE {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=13.46 E-value=1.2e+02 Score=19.44 Aligned_cols=14 Identities=43% Similarity=0.693 Sum_probs=10.8
Q ss_pred HHHHhhhCCCCCcc
Q 021787 115 DAIKDAVGRPRPDF 128 (307)
Q Consensus 115 ~~lK~~~grpRP~~ 128 (307)
.+.-..+|-|||+-
T Consensus 39 GLAYdvFGtPrPne 52 (82)
T d2axte1 39 GLAYDVFGTPRPDS 52 (82)
T ss_dssp THHHHHTTCCCTTC
T ss_pred ccchhhcCCCCccc
Confidence 35557899999983
No 6
>d1wyha1 g.39.1.3 (A:35-66) Four and a half LIM domains 3, FHL3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.46 E-value=41 Score=17.92 Aligned_cols=11 Identities=45% Similarity=0.579 Sum_probs=8.6
Q ss_pred hccccccccee
Q 021787 292 RQGVGSVSFTQ 302 (307)
Q Consensus 292 ~~~~~~~~~~~ 302 (307)
-|++|+-||-.
T Consensus 6 ~qPIGtkSFip 16 (32)
T d1wyha1 6 EQPLGSRSFVP 16 (32)
T ss_dssp CCBTTTSCEEE
T ss_pred cCccccccccc
Confidence 48999988853
No 7
>d1jb0m_ f.23.19.1 (M:) Subunit XII of photosystem I reaction centre, PsaM {Synechococcus elongatus [TaxId: 32046]}
Probab=8.95 E-value=1.4e+02 Score=15.26 Aligned_cols=20 Identities=10% Similarity=0.296 Sum_probs=14.6
Q ss_pred hHhHHHHHHHHHHHHHHHHH
Q 021787 224 QDVFGGAIIGTIVSFFCYLQ 243 (307)
Q Consensus 224 sDVl~G~~lG~~~a~~~~~~ 243 (307)
++|+...++..+-+.++||+
T Consensus 6 tqv~valvial~pg~lafrl 25 (31)
T d1jb0m_ 6 TQVYVALVIALLPAVLAFRL 25 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45777777777777777775
No 8
>d1v54d_ f.23.1.1 (D:) Mitochondrial cytochrome c oxidase subunit IV {Cow (Bos taurus) [TaxId: 9913]}
Probab=7.60 E-value=3.2e+02 Score=19.40 Aligned_cols=35 Identities=17% Similarity=0.185 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCccc
Q 021787 95 DLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFF 129 (307)
Q Consensus 95 ~~~~~~l~l~~~~~~~~~~~~~lK~~~grpRP~~l 129 (307)
++...+.+.++.++++.++....+..+.-+.|..+
T Consensus 74 ewK~v~g~~~~~i~~s~~i~~~~r~~v~p~~P~T~ 108 (144)
T d1v54d_ 74 EWKTVVGAAMFFIGFTALLLIWEKHYVYGPIPHTF 108 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCGGG
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 34445566677788888888889998888888854
No 9
>d1x4ka1 g.39.1.3 (A:35-66) Four and a half LIM domains protein 2, FHL2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.50 E-value=83 Score=16.64 Aligned_cols=10 Identities=40% Similarity=0.690 Sum_probs=8.0
Q ss_pred hcccccccce
Q 021787 292 RQGVGSVSFT 301 (307)
Q Consensus 292 ~~~~~~~~~~ 301 (307)
.|++|+-||-
T Consensus 6 ~qPIGtksfi 15 (32)
T d1x4ka1 6 QQPIGTKSFI 15 (32)
T ss_dssp CCCCCSSSEE
T ss_pred cCcccccccc
Confidence 4889988885
No 10
>d1hbna1 a.89.1.1 (A:270-549) Alpha chain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=4.57 E-value=87 Score=25.10 Aligned_cols=48 Identities=23% Similarity=0.235 Sum_probs=28.9
Q ss_pred CCCCCcchhhhHhhhccccccCCCCccchhhhhhhhhhhhhhhc---------cccccccee
Q 021787 250 DTDGMSLTLYFMVVCCSVLFSLPSASINTQLCIQWYCLDWKVRQ---------GVGSVSFTQ 302 (307)
Q Consensus 250 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~---------~~~~~~~~~ 302 (307)
++.+..|+...-++..+.....-.+.-...|.++-.++-+ || ||| |||
T Consensus 7 nepgg~~fG~~~d~vq~~r~~p~dP~~~~Levv~ag~mly--DQiwlgsymSGGVG---FTQ 63 (280)
T d1hbna1 7 NEPGGVPFGYLADICQSSRVNYEDPVRVSLDVVATGAMLY--DQIWLGSYMSGGVG---FTQ 63 (280)
T ss_dssp SSGGGSCHHHHHHHSCHHHHSTTCHHHHHHHHHHHHHHHH--HTTCCCCCTTCTTC---CHH
T ss_pred CCCCCcccccchhhcccCCCCCCCcccchhhhhhhhhhhh--hhhhhhccccCCCC---ccc
Confidence 4556667777666655444433344555677777666654 44 677 987
Done!