BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021791
(307 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 240/305 (78%), Positives = 281/305 (92%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N KMYT LIYGWCKINR+ +AER LGEM+ERG+E NVVTYNVLLNG+CRRASLHP++RFE
Sbjct: 221 NAKMYTILIYGWCKINRVSIAERLLGEMVERGIEANVVTYNVLLNGICRRASLHPDDRFE 280
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+TIR+AEKV DEMR +GIEPDVTS+SIV+HVYSRAHKP+L+LDKL MK+KGI PTVATY
Sbjct: 281 RTIRDAEKVLDEMRQKGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATY 340
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
TSVVKCLCSCGR+EDAEEL+ +MV++GVSPSA TYNCFFKEYRGRKD++ A++LYR+MKE
Sbjct: 341 TSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKE 400
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ C+P++HTYNIL+GMF+ LNRM++V+EIW+ +K S G DLDSYT+LIHGLCEKQKWK
Sbjct: 401 EYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWK 460
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
EAC +FVEMIEKG LPQK+TFETLYRGLIQSDML+TWRRLKKKL+EESITFGSEFQ YHF
Sbjct: 461 EACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEEESITFGSEFQQYHF 520
Query: 303 KPYRR 307
KPYRR
Sbjct: 521 KPYRR 525
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 137/299 (45%), Gaps = 29/299 (9%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +I K+ + D+A +F+ EM + +EP T+ +L+ R S+
Sbjct: 116 DVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILI-----RRSVSAG---- 166
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTS--FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
R A + FD+M +E D S F +L S+ +L+ N K K
Sbjct: 167 -LTRQAVRAFDDMSC-FVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFK-FEANAK 223
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK----------EYRGRKDA 170
YT ++ C R+ AE LLGEMV G+ + TYN + R +
Sbjct: 224 MYTILIYGWCKINRVSIAERLLGEMVERGIEANVVTYNVLLNGICRRASLHPDDRFERTI 283
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
A K+ +M++ + P++ +Y+I+I ++ ++ ++ + +K + + +YT
Sbjct: 284 RDAEKVLDEMRQKGI-EPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTS 342
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL---YRGLIQSD-MLRTWRRLKKK 285
++ LC + ++A + +M++ G+ P T+ YRG SD LR +R++K++
Sbjct: 343 VVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEE 401
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V YTS++ C R++ AE + +M++ GV P+ TYN R
Sbjct: 335 PTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFK----------EYRG 384
Query: 62 EKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K NA +++ +M+ PD+ +++I++ ++ + ++ ++ + + MK G P +
Sbjct: 385 RKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLD 444
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+YT ++ LC + ++A EM+ G P T+ YRG ++ +K +R++
Sbjct: 445 SYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETL---YRGLIQSD-MLKTWRRL 500
Query: 181 KE 182
K+
Sbjct: 501 KK 502
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 92/217 (42%), Gaps = 16/217 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+ +I+ + + ++ ++ L M ++G+ P V TY ++ +C L
Sbjct: 300 PDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRL------ 353
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVA 120
+AE++ +M G+ P +++ Y +L MKE+ C P +
Sbjct: 354 ----EDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMH 409
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +V R+E +E+ +M +G P ++Y ++ A + +M
Sbjct: 410 TYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEM 469
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
E +P T+ L + L + DM++ W +K
Sbjct: 470 IEKGY-LPQKITFETL---YRGLIQSDMLK-TWRRLK 501
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YT LI+G C+ + A F EMIE+G P +T+ L G+ + L R
Sbjct: 441 PDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRL 500
Query: 62 EKTIRNAEKVF 72
+K + F
Sbjct: 501 KKKLEEESITF 511
>gi|147767583|emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust.
Identities = 238/305 (78%), Positives = 278/305 (91%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N KMYT LIYGWCKINR+ +AER LGEM+ERG+ NVVTYNVLLNG+CR ASLHP++RFE
Sbjct: 221 NAKMYTILIYGWCKINRVSIAERLLGEMVERGJXANVVTYNVLLNGICRXASLHPDDRFE 280
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+TIR+AEKV DEMR GIEPDVTS+SIV+HVYSRAHKP+L+LDKL MK+KGI PTVATY
Sbjct: 281 RTIRDAEKVLDEMRQXGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATY 340
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
TSVVKCLCSCGR+EDAEEL+ +MV++GVSPSA TYNCFFKEYRGRKD++ A++LYR+MKE
Sbjct: 341 TSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKE 400
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ C+P++HTYNIL+GMF+ LNRM++V+EIW+ +K S G DLDSYT+LIHGLCEKQKWK
Sbjct: 401 EYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWK 460
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
EAC +FVEMIEKG LPQK+TFETLYRGLIQSDML+TWRRLKKKL+EESITFGSEFQ YHF
Sbjct: 461 EACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEEESITFGSEFQXYHF 520
Query: 303 KPYRR 307
KPYRR
Sbjct: 521 KPYRR 525
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 137/299 (45%), Gaps = 29/299 (9%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +I K+ + D+A +F+ EM + +EP T+ +L+ R S+
Sbjct: 116 DVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILI-----RRSVSAG---- 166
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTS--FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
R A + FD+M +E D S F +L S+ +L+ N K K
Sbjct: 167 -LTRQAVRAFDDMSC-FVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFK-FEANAK 223
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK----------EYRGRKDA 170
YT ++ C R+ AE LLGEMV G+ + TYN + R +
Sbjct: 224 MYTILIYGWCKINRVSIAERLLGEMVERGJXANVVTYNVLLNGICRXASLHPDDRFERTI 283
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
A K+ +M++ + P++ +Y+I+I ++ ++ ++ + +K + + +YT
Sbjct: 284 RDAEKVLDEMRQXGI-EPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTS 342
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL---YRGLIQSD-MLRTWRRLKKK 285
++ LC + ++A + +M++ G+ P T+ YRG SD LR +R++K++
Sbjct: 343 VVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEE 401
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V YTS++ C R++ AE + +M++ GV P+ TYN R
Sbjct: 335 PTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFK----------EYRG 384
Query: 62 EKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K NA +++ +M+ PD+ +++I++ ++ + ++ ++ + + MK G P +
Sbjct: 385 RKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLD 444
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+YT ++ LC + ++A EM+ G P T+ YRG ++ +K +R++
Sbjct: 445 SYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETL---YRGLIQSD-MLKTWRRL 500
Query: 181 KE 182
K+
Sbjct: 501 KK 502
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 92/217 (42%), Gaps = 16/217 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+ +I+ + + ++ ++ L M ++G+ P V TY ++ +C L
Sbjct: 300 PDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRL------ 353
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVA 120
+AE++ +M G+ P +++ Y +L MKE+ C P +
Sbjct: 354 ----EDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMH 409
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +V R+E +E+ +M +G P ++Y ++ A + +M
Sbjct: 410 TYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEM 469
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
E +P T+ L + L + DM++ W +K
Sbjct: 470 IEKGY-LPQKITFETL---YRGLIQSDMLK-TWRRLK 501
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YT LI+G C+ + A F EMIE+G P +T+ L G+ + L R
Sbjct: 441 PDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRL 500
Query: 62 EKTIRNAEKVF 72
+K + F
Sbjct: 501 KKKLEEESITF 511
>gi|224081016|ref|XP_002306265.1| predicted protein [Populus trichocarpa]
gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust.
Identities = 247/306 (80%), Positives = 270/306 (88%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNVKMYT LIYGWCKI RIDMAERFL E ERG+E VVTYNVLLNG+CRRASLHP RF
Sbjct: 243 PNVKMYTVLIYGWCKIGRIDMAERFLKETGERGIEATVVTYNVLLNGICRRASLHPESRF 302
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+TI AE +FDEMR RGIEPDVTSFSIVLHVYSRAHKP+L+LDKL MKEKGICP+V T
Sbjct: 303 ERTITLAENLFDEMRERGIEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVT 362
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTSVVKCLCSCGRIEDAEELLGEMVRNGVS +A TYNCFFKEY GRKDA A+KLY++M+
Sbjct: 363 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKMR 422
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
ED L +H+YNIL+ MFM LNR+D+V EIW +K S LG DLDSYTMLIHGLCEK+KW
Sbjct: 423 EDGLGSLGLHSYNILLRMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYTMLIHGLCEKEKW 482
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
+EAC++FVEMIEKGLLPQKVTFETLY+GLIQSDMLRTWRRLKKKLDEESITFGSEFQNY
Sbjct: 483 REACKFFVEMIEKGLLPQKVTFETLYKGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYQ 542
Query: 302 FKPYRR 307
KPYRR
Sbjct: 543 LKPYRR 548
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M ++ + PT T+ +++ L + G A +M P ET+ CF + +
Sbjct: 166 MDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDDMESFVSEPVNETHFCFLLDTLCKY- 224
Query: 170 ANGAMKLYRQM--KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS 227
G +K+ ++ K PN+ Y +LI + + R+DM + + +
Sbjct: 225 --GYVKVGVEIFNKRKHRFSPNVKMYTVLIYGWCKIGRIDMAERFLKETGERGIEATVVT 282
Query: 228 YTMLIHGLCEKQKWKEACQY----------FVEMIEKGLLPQKVTF 263
Y +L++G+C + ++ F EM E+G+ P +F
Sbjct: 283 YNVLLNGICRRASLHPESRFERTITLAENLFDEMRERGIEPDVTSF 328
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 1/167 (0%)
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY ++ L + + +L+ EM + V P++ET+ + A++ +
Sbjct: 141 VTYNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDD 200
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ N + L+ + + EI+N K ++ YT+LI+G C+
Sbjct: 201 MESFVSEPVNETHFCFLLDTLCKYGYVKVGVEIFNKRK-HRFSPNVKMYTVLIYGWCKIG 259
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ A ++ E E+G+ VT+ L G+ + L R ++ +
Sbjct: 260 RIDMAERFLKETGERGIEATVVTYNVLLNGICRRASLHPESRFERTI 306
>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 511
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 233/307 (75%), Positives = 271/307 (88%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV++YT LIYGWCKI RIDMAERF+ EM E G+E NVVTYNVLL+G+CRRA L P R
Sbjct: 205 LPNVRIYTVLIYGWCKIGRIDMAERFIREMDEMGIEANVVTYNVLLDGICRRAKLQPEGR 264
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
FE+TI A+KVFDEMR +GIEPDVTSFSI+LHVYSRAHKPQL++DKL M+E GICPTVA
Sbjct: 265 FERTIMKADKVFDEMRQKGIEPDVTSFSILLHVYSRAHKPQLTVDKLKLMEEMGICPTVA 324
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTSV+KCLCSCGRI+DAEELL +MVRNGVSP+A TYNCFFKEYRGRKD A+KLYR++
Sbjct: 325 TYTSVLKCLCSCGRIDDAEELLEQMVRNGVSPNAATYNCFFKEYRGRKDPETALKLYRKI 384
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++++LC P++HTYNIL+GMFM LNR ++V EIWN ++ S G DLDSYT+L+HGLCEKQK
Sbjct: 385 RQENLCDPSVHTYNILLGMFMKLNRFNIVNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQK 444
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
W++ACQ+FVEMIEKGLLPQK TFE LY GLIQS+MLRTWRRLKKKLDEESI FGSEF NY
Sbjct: 445 WQKACQFFVEMIEKGLLPQKATFEMLYAGLIQSNMLRTWRRLKKKLDEESIAFGSEFSNY 504
Query: 301 HFKPYRR 307
H KPYRR
Sbjct: 505 HLKPYRR 511
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust.
Identities = 234/307 (76%), Positives = 265/307 (86%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ +VKMYT LIYGWCKI R A FL EM +GVEPNVVTYNV+LNG+CR+ASLHP ER
Sbjct: 197 VADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEER 256
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
FE+TIR+AEKVFDEMR GIEPDVTSFSIVLHVYSRAHKPQL LDKL MKEKGICP V
Sbjct: 257 FERTIRDAEKVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVV 316
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTSV+KCLCSCGRIE+AE+L+ EMVRNGVSP A TYNCFFKEYRGRKDA+ A+K +++M
Sbjct: 317 TYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKM 376
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
KED LC P HTY +LI MF+ + + +V+EIWN + S +G DLDSYT+LIHGLCE +K
Sbjct: 377 KEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKK 436
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
W+EACQYFVEMIEKG LPQKVTFETLYRGLIQSDMLRTWRRLKK+LD+ESITFGSEFQNY
Sbjct: 437 WREACQYFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKRLDQESITFGSEFQNY 496
Query: 301 HFKPYRR 307
H KPY+R
Sbjct: 497 HLKPYKR 503
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 231/305 (75%), Positives = 269/305 (88%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+VK+YT LIYGWCKI R +MAERFL +M+ERG+EPNVVTYNVLLNGVCRRASLHP RFE
Sbjct: 202 DVKIYTILIYGWCKIGRFEMAERFLKDMVERGIEPNVVTYNVLLNGVCRRASLHPEGRFE 261
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
KTIR+AEKVFDEMR RGIEPDVTSFSIVLHVYSRAHKP+LSLDKL MKE GI PTVATY
Sbjct: 262 KTIRHAEKVFDEMRKRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATY 321
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
TSV+KCLCSCGR+ED E L+ EMVR+G+SPS TYNCFFKEYRGRKD GA++LY++M+E
Sbjct: 322 TSVIKCLCSCGRLEDGENLIEEMVRSGISPSPTTYNCFFKEYRGRKDGAGALRLYKKMRE 381
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D LC P++HTYNIL+ +F+ L++ + ++E+WN +K S +G DLDSYT +IHGLCEKQ+W
Sbjct: 382 DCLCAPSLHTYNILLALFLNLDKKETLKELWNDMKESGVGPDLDSYTTIIHGLCEKQRWS 441
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
EACQ+FVEMIE+G LPQKVTFE LYRGLIQSDMLRTWRRLKKKL+EES T+GSE +NYH
Sbjct: 442 EACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWRRLKKKLEEESKTYGSELKNYHI 501
Query: 303 KPYRR 307
KPY R
Sbjct: 502 KPYMR 506
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V YTS+I C R++ E + EM+ G+ P+ TYN R
Sbjct: 316 PTVATYTSVIKCLCSCGRLEDGENLIEEMVRSGISPSPTTYNCFFK----------EYRG 365
Query: 62 EKTIRNAEKVFDEMRVRGI-EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K A +++ +MR + P + +++I+L ++ K + + N MKE G+ P +
Sbjct: 366 RKDGAGALRLYKKMREDCLCAPSLHTYNILLALFLNLDKKETLKELWNDMKESGVGPDLD 425
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+YT+++ LC R +A + EM+ G P T+ YRG ++ ++ +R++
Sbjct: 426 SYTTIIHGLCEKQRWSEACQFFVEMIERGFLPQKVTFEML---YRGLIQSD-MLRTWRRL 481
Query: 181 KE 182
K+
Sbjct: 482 KK 483
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YT++I+G C+ R A +F EMIERG P VT+ +L G+ + L R
Sbjct: 422 PDLDSYTTIIHGLCEKQRWSEACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWRRL 481
Query: 62 EKTIRNAEKVF-DEMRVRGIEP 82
+K + K + E++ I+P
Sbjct: 482 KKKLEEESKTYGSELKNYHIKP 503
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
E++N K E G+D+ YT+LI+G C+ +++ A ++ +M+E+G+ P VT+ L G+
Sbjct: 190 EVFNKRK-EEFGVDVKIYTILIYGWCKIGRFEMAERFLKDMVERGIEPNVVTYNVLLNGV 248
Query: 271 IQSDMLRTWRRLKKKLDEESITF 293
+ L R +K + F
Sbjct: 249 CRRASLHPEGRFEKTIRHAEKVF 271
>gi|356499253|ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Glycine max]
Length = 510
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 226/306 (73%), Positives = 261/306 (85%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P VKMYT LIYGWCKI RI A+ FL EMI++G+EPNVVTYNVLLNGVCR+ SLHP ERF
Sbjct: 205 PTVKMYTVLIYGWCKIGRIKTAQSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEERF 264
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+TIRNAE+VFD+MR GIEPDVTSFSI+LHVYSRAHKPQL LDKL+ MKEKGICP V
Sbjct: 265 ERTIRNAEEVFDQMRESGIEPDVTSFSILLHVYSRAHKPQLVLDKLSLMKEKGICPNVVM 324
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTSV+KCL SCG +EDAE LLGEMVR+GVSP A TYNCFFKE+RGRKD A++++++MK
Sbjct: 325 YTSVIKCLASCGWLEDAERLLGEMVRDGVSPCAATYNCFFKEFRGRKDGESALRMFKRMK 384
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
ED LC+P+ HTY ILI MF+ L+ + +V+EIW +K + G DLD YT+LIHGLCE+Q+W
Sbjct: 385 EDGLCMPSSHTYVILIRMFLRLDMIKVVKEIWQDMKETGAGPDLDLYTVLIHGLCERQRW 444
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
+EAC YFVEMIE G LP K TFE+LYRGLIQ+DMLRTWRRLKKKLDEESITFGSEFQNY
Sbjct: 445 REACHYFVEMIENGFLPLKGTFESLYRGLIQADMLRTWRRLKKKLDEESITFGSEFQNYQ 504
Query: 302 FKPYRR 307
KPYRR
Sbjct: 505 LKPYRR 510
>gi|122236160|sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g13420, mitochondrial; Flags: Precursor
gi|110738270|dbj|BAF01064.1| hypothetical protein [Arabidopsis thaliana]
Length = 509
Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/303 (74%), Positives = 263/303 (86%), Gaps = 1/303 (0%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
K+YT LI GWCK+ RIDMAE+FL EMIE G+EPNVVTYNVLLNG+CR ASLHP ERFE+
Sbjct: 208 KVYTILIAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERN 267
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+RNAEKVFDEMR RGIEPDVTSFSIVLH+YSRAHK +L+LDK+ MK KGI PT+ TYTS
Sbjct: 268 VRNAEKVFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTS 327
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
VVKCLCSCGR+E+AEELL MV +G+SPS+ TYNCFFKEY+GRKDANGAM LYR+MK +
Sbjct: 328 VVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMK-NG 386
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
LC P+ TYN+L+G F+ L +M+ V+EIW+ +K SE G DLDSYT L+HGLC K+KWKEA
Sbjct: 387 LCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEA 446
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
C YFVEMIE+G LPQK+TFETLY+GLIQS+ +RTWRRLKKKLDEESITFGSEFQ Y F+P
Sbjct: 447 CGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKKKLDEESITFGSEFQRYPFEP 506
Query: 305 YRR 307
Y+R
Sbjct: 507 YKR 509
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P ++ YTS++ C R++ AE L M+E G+ P+ TYN R
Sbjct: 320 PTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGR--------- 370
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K A ++ +M+ +P +++++L + K + + + +K P + +
Sbjct: 371 -KDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDS 429
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS+V LCS + ++A EM+ G P T+ Y+G +N M+ +R++K
Sbjct: 430 YTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETL---YKGLIQSN-KMRTWRRLK 485
Query: 182 E 182
+
Sbjct: 486 K 486
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
M ++N K E G D YT+LI G C+ ++ A ++ VEMIE G+ P VT+ L
Sbjct: 191 MAVGVFNERK-EEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNVLL 249
Query: 268 RGLIQSDMLRTWRRLKKKL 286
G+ ++ L R ++ +
Sbjct: 250 NGICRTASLHPEERFERNV 268
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/230 (17%), Positives = 97/230 (42%), Gaps = 37/230 (16%)
Query: 39 VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
+V + LL+ +C+ + A VF+E R D ++I++ + +
Sbjct: 173 LVEFGFLLDTLCKYGY----------TKMAVGVFNE-RKEEFGSDEKVYTILIAGWCKLR 221
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
+ ++ L M E GI P V TY ++ +C + E
Sbjct: 222 RIDMAEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEE------------------- 262
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
R ++ A K++ +M++ + P++ +++I++ M+ ++ ++ + +K
Sbjct: 263 ------RFERNVRNAEKVFDEMRQRGI-EPDVTSFSIVLHMYSRAHKAELTLDKMKLMKA 315
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+ +++YT ++ LC + +EA + M+E G+ P T+ ++
Sbjct: 316 KGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFK 365
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YTSL++G C + A + EMIERG P +T+ L G+ + + R
Sbjct: 425 PDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRL 484
Query: 62 EKTIRNAEKVF-DEMRVRGIEP 82
+K + F E + EP
Sbjct: 485 KKKLDEESITFGSEFQRYPFEP 506
>gi|242071011|ref|XP_002450782.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
gi|241936625|gb|EES09770.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
Length = 528
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 207/307 (67%), Positives = 254/307 (82%), Gaps = 1/307 (0%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN KMYT LIYGWCK+NR DMA +FL +M++ G+EPN+VTYN+LLNG+CR ASLHP+ RF
Sbjct: 222 PNEKMYTILIYGWCKVNRNDMARKFLKDMLDHGIEPNIVTYNILLNGICRHASLHPDYRF 281
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++T+ +AE V EMR RGIEPDVTS+SI+LHVYSRAHKP+L + MK++GICPTVAT
Sbjct: 282 DRTVHSAEDVLKEMRDRGIEPDVTSYSIILHVYSRAHKPELCVCMFRSMKDRGICPTVAT 341
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTSV+KCL SCGR+EDAE LL EMV GV PS TYNCFFKEYRGR D +GA++LY +MK
Sbjct: 342 YTSVIKCLASCGRLEDAETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLYNKMK 401
Query: 182 ED-DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L P+IHTYNIL+GMF+ LNR V++IW+ + S +G DLDSYT+LIHG C QK
Sbjct: 402 QPGSLTAPDIHTYNILLGMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFCASQK 461
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
W+EACQ+F+EMIEKG LPQK+TFETLYRGLIQ+DMLRTWRRLK+++DEE+ FG EF+ Y
Sbjct: 462 WREACQFFMEMIEKGFLPQKITFETLYRGLIQADMLRTWRRLKRRVDEEAAKFGDEFKLY 521
Query: 301 HFKPYRR 307
H KPY+R
Sbjct: 522 HMKPYKR 528
>gi|125561327|gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indica Group]
Length = 511
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 205/307 (66%), Positives = 253/307 (82%), Gaps = 1/307 (0%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN KMYT LIYGWCK+NR DMA++FL +MI G+EPN+VTYN+LLNG+CR ASLHP+ RF
Sbjct: 205 PNEKMYTVLIYGWCKVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRF 264
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++T+R AE + EM RGIEPDVTS+S++LHVYSRAHKP+L L MKE+GICPTVAT
Sbjct: 265 DRTVRAAEDLLKEMHQRGIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVAT 324
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTSV+KCL SCGR++DAE LL EM GV PS TYNCFFKEYRGRKD NGA++LY +MK
Sbjct: 325 YTSVIKCLASCGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMK 384
Query: 182 ED-DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
P+IHTYNIL+GMF+ LN+ D V ++WN + S +G DL+SYT+L+HGLC+ +K
Sbjct: 385 APGSPATPDIHTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKK 444
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
W+EACQ+F+EMIE+G LPQK+TFETLYRGLIQ+DMLRTWRRLKK++DEE+ FG EF+ Y
Sbjct: 445 WREACQFFMEMIERGFLPQKITFETLYRGLIQADMLRTWRRLKKRVDEEAAKFGEEFKPY 504
Query: 301 HFKPYRR 307
H KPY+R
Sbjct: 505 HIKPYKR 511
>gi|115476116|ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|113623623|dbj|BAF23568.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|125603197|gb|EAZ42522.1| hypothetical protein OsJ_27088 [Oryza sativa Japonica Group]
gi|215740653|dbj|BAG97309.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 511
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 204/307 (66%), Positives = 253/307 (82%), Gaps = 1/307 (0%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN KMYT LIYGWCK+NR DMA++FL +MI G+EPN+VTYN+LLNG+CR ASLHP+ RF
Sbjct: 205 PNEKMYTVLIYGWCKVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRF 264
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++T+R AE + EM RGIEP+VTS+S++LHVYSRAHKP+L L MKE+GICPTVAT
Sbjct: 265 DRTVRAAEDLLKEMHQRGIEPNVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVAT 324
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTSV+KCL SCGR++DAE LL EM GV PS TYNCFFKEYRGRKD NGA++LY +MK
Sbjct: 325 YTSVIKCLASCGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMK 384
Query: 182 ED-DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
P+IHTYNIL+GMF+ LN+ D V ++WN + S +G DL+SYT+L+HGLC+ +K
Sbjct: 385 APGSPATPDIHTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKK 444
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
W+EACQ+F+EMIE+G LPQK+TFETLYRGLIQ+DMLRTWRRLKK++DEE+ FG EF+ Y
Sbjct: 445 WREACQFFMEMIERGFLPQKITFETLYRGLIQADMLRTWRRLKKRVDEEAAKFGEEFKPY 504
Query: 301 HFKPYRR 307
H KPY+R
Sbjct: 505 HIKPYKR 511
>gi|326504802|dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 204/307 (66%), Positives = 252/307 (82%), Gaps = 1/307 (0%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN KMYT LIYGWCK+NR DMA++FL +MI+ G+EPN+VTYN+LLNG+CR ASLHP+ RF
Sbjct: 216 PNEKMYTILIYGWCKVNRSDMAQKFLKDMIDHGIEPNIVTYNILLNGICRHASLHPDNRF 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++T+ AE + EM RGIEPDVTS+SI+LHVYSRAHK +L L MK++GICPTVAT
Sbjct: 276 DRTVNAAENLLKEMNDRGIEPDVTSYSIILHVYSRAHKAELCLCMFRSMKDRGICPTVAT 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTSV+KCL SCGR+EDAE LLGEMV GV PS TYNCFFKEYRGRKD +GA++LY +MK
Sbjct: 336 YTSVIKCLASCGRLEDAESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNKMK 395
Query: 182 ED-DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
P+IH+YNIL+GMF+ L+R + V E+WN + +G DLDSYT+L+HG C K+K
Sbjct: 396 APCSPTAPDIHSYNILLGMFIKLDRHETVMELWNDMCERAVGPDLDSYTLLVHGFCAKEK 455
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
W+EACQ+F+EMIEKG LPQK+TFET YRGLIQ+DMLRTWRRLKK++DEES FG E+++Y
Sbjct: 456 WREACQFFMEMIEKGFLPQKITFETPYRGLIQADMLRTWRRLKKRVDEESAKFGDEYKSY 515
Query: 301 HFKPYRR 307
H KPY+R
Sbjct: 516 HIKPYKR 522
>gi|357156708|ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Brachypodium distachyon]
Length = 522
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 206/307 (67%), Positives = 251/307 (81%), Gaps = 1/307 (0%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN KMYT LIYGWCK+NR DM+++FL +MI+ G+EPNVVTYN+LLNGVCR ASLHP+ RF
Sbjct: 216 PNEKMYTILIYGWCKVNRNDMSQKFLKDMIDHGIEPNVVTYNILLNGVCRHASLHPDNRF 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++T+R AE + EMR RGIEPDVTS+SIVLHVYSRAHK +L L MK++GICPTVAT
Sbjct: 276 DRTVRAAEDLLKEMRDRGIEPDVTSYSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVAT 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTSV+KCL SCGR+EDAE LL EM GV PS TYNCFFKEYRGRKD GA++LY++MK
Sbjct: 336 YTSVIKCLASCGRLEDAERLLHEMASEGVCPSPATYNCFFKEYRGRKDVIGALELYKKMK 395
Query: 182 ED-DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
P+IH+Y+IL+GMF+ LN+ V E+WN + S +G DLDSYT+LIHG CE +K
Sbjct: 396 APASPTAPDIHSYHILLGMFVKLNQHGTVTELWNDMCESTVGPDLDSYTLLIHGFCENEK 455
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
W+EACQ+F+EMIEKG LPQK+TFE LYRGLIQ+DMLRTWRRLKK++DEE+ FG E++ Y
Sbjct: 456 WREACQFFMEMIEKGFLPQKITFEILYRGLIQADMLRTWRRLKKRVDEEAAKFGDEYKLY 515
Query: 301 HFKPYRR 307
H KPY+R
Sbjct: 516 HIKPYKR 522
>gi|413939122|gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]
Length = 526
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 204/307 (66%), Positives = 247/307 (80%), Gaps = 1/307 (0%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN KMY+ LIYGWCK+NR DMA++FL +M+ G+EPN+VTYN+LLNG+CR ASLHP+ RF
Sbjct: 220 PNEKMYSILIYGWCKVNRSDMAKKFLKDMLVHGIEPNIVTYNILLNGICRHASLHPDYRF 279
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++T+ AE + EMR RGIEPDVTS+SI+LHVYSRAHKP+L L MKE+GICPTVAT
Sbjct: 280 DRTVHAAEDLLKEMRGRGIEPDVTSYSIILHVYSRAHKPELCLCMFRSMKERGICPTVAT 339
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTSV+KCL SCGR+ED E LL EMV GV PS TYNCF KEYRGRKD A++LY +MK
Sbjct: 340 YTSVIKCLSSCGRLEDGEILLDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMK 399
Query: 182 ED-DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L P+IHTYNIL+GMF LNR V +IW+ + S +G DLDSYT+LIH C+ QK
Sbjct: 400 APGSLTAPDIHTYNILLGMFSKLNRHGTVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQK 459
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
W+EACQ+F+EMIEKG LPQK+TFETLYRGLIQ+DMLRTWRRLK+++DEE+ FG EF+ Y
Sbjct: 460 WREACQFFMEMIEKGFLPQKITFETLYRGLIQADMLRTWRRLKRRVDEEAAKFGDEFKLY 519
Query: 301 HFKPYRR 307
H KPY+R
Sbjct: 520 HMKPYKR 526
>gi|413953911|gb|AFW86560.1| hypothetical protein ZEAMMB73_703962 [Zea mays]
Length = 287
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/287 (65%), Positives = 230/287 (80%), Gaps = 1/287 (0%)
Query: 22 MAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE 81
MA++FL +M+ G+EPN+VTYN+LLNG+CR ASLHP+ RF++T+ AE + EMR RGIE
Sbjct: 1 MAKKFLKDMLVHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRGIE 60
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
PDVTS+SI+LHVYSRAHKP+L L MKE+GICPTVATYTSV+KCL SCGR+ED E L
Sbjct: 61 PDVTSYSIILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDGEIL 120
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE-DDLCVPNIHTYNILIGMF 200
L EMV GV PS TYNCF KEYRGRKD A++LY +MK L P+IHTYNIL+GMF
Sbjct: 121 LDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMF 180
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
LNR V +IW+ + S +G DLDSYT+LIH C+ QKW+EACQ+F+EMIEKG LPQK
Sbjct: 181 SKLNRHGTVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQK 240
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPYRR 307
+TFETLYRGLIQ+DMLRTWRRLK+++DEE+ FG EF+ YH KPY+R
Sbjct: 241 ITFETLYRGLIQADMLRTWRRLKRRVDEEAAKFGDEFKLYHMKPYKR 287
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V YTS+I R++ E L EM+ GV P+ TYN L R
Sbjct: 96 PTVATYTSVIKCLSSCGRLEDGEILLDEMVAEGVCPSPATYNCFLK----------EYRG 145
Query: 62 EKTIRNAEKVFDEMRVRG--IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
K + A +++++M+ G PD+ +++I+L ++S+ ++ +D + M E + P +
Sbjct: 146 RKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNRHGTVMDIWSDMCESTVGPDL 205
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+YT ++ C C + +A + EM+ G P T+ YRG A+ ++ +R+
Sbjct: 206 DSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQKITFETL---YRGLIQAD-MLRTWRR 261
Query: 180 MK 181
+K
Sbjct: 262 LK 263
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YT LI+ +C + A +F EMIE+G P +T+ L G+ + L R
Sbjct: 203 PDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQKITFETLYRGLIQADMLRTWRRL 262
Query: 62 EKTI-RNAEKVFDEMRVRGIEP 82
++ + A K DE ++ ++P
Sbjct: 263 KRRVDEEAAKFGDEFKLYHMKP 284
>gi|326504240|dbj|BAJ90952.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 263
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/258 (65%), Positives = 209/258 (81%), Gaps = 1/258 (0%)
Query: 51 RRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFM 110
R ASLHP+ RF++T+ AE + EM RGIEPDVTS+SI+LHVYSRAHK +L L M
Sbjct: 6 RHASLHPDNRFDRTVNAAENLLKEMNDRGIEPDVTSYSIILHVYSRAHKAELCLCMFRSM 65
Query: 111 KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
K++GICPTVATYTSV+KCL SCGR+EDAE LLGEMV GV PS TYNCFFKEYRGRKD
Sbjct: 66 KDRGICPTVATYTSVIKCLASCGRLEDAESLLGEMVSEGVCPSPATYNCFFKEYRGRKDV 125
Query: 171 NGAMKLYRQMKED-DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
+GA++LY +MK P+IH+YNIL+GMF+ L+R + V E+WN + +G DLDSYT
Sbjct: 126 SGALELYNKMKAPCSPTAPDIHSYNILLGMFIKLDRHETVMELWNDMCERAVGPDLDSYT 185
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
+L+HG C K+KW+EACQ+F+EMIEKG LPQK+TFETLYRGLIQ+DMLRTWRRLKK++DEE
Sbjct: 186 LLVHGFCAKEKWREACQFFMEMIEKGFLPQKITFETLYRGLIQADMLRTWRRLKKRVDEE 245
Query: 290 SITFGSEFQNYHFKPYRR 307
S FG E+++YH KPY+R
Sbjct: 246 SAKFGDEYKSYHIKPYKR 263
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 16/183 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V YTS+I R++ AE LGEM+ GV P+ TYN R
Sbjct: 72 PTVATYTSVIKCLASCGRLEDAESLLGEMVSEGVCPSPATYNCFFK----------EYRG 121
Query: 62 EKTIRNAEKVFDEMRV--RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
K + A +++++M+ PD+ S++I+L ++ + + + ++ N M E+ + P +
Sbjct: 122 RKDVSGALELYNKMKAPCSPTAPDIHSYNILLGMFIKLDRHETVMELWNDMCERAVGPDL 181
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+YT +V C+ + +A + EM+ G P T+ YRG A+ ++ +R+
Sbjct: 182 DSYTLLVHGFCAKEKWREACQFFMEMIEKGFLPQKITFETL---YRGLIQAD-MLRTWRR 237
Query: 180 MKE 182
+K+
Sbjct: 238 LKK 240
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YT L++G+C + A +F EMIE+G P +T+ L G+ + L R
Sbjct: 179 PDLDSYTLLVHGFCAKEKWREACQFFMEMIEKGFLPQKITFETLYRGLIQADMLRTWRRL 238
Query: 62 EKTI-RNAEKVFDEMRVRGIEP 82
+K + + K DE + I+P
Sbjct: 239 KKRVDEESAKFGDEYKSYHIKP 260
>gi|242049112|ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
gi|241925677|gb|EER98821.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
Length = 541
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 145/261 (55%), Gaps = 11/261 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ K YT LI GW + + + A++ EMIERGV+P+V YN L++ +CR + +
Sbjct: 215 SAKTYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQ--- 271
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
E++ D R RG+ PD ++ L + + +L L+ M+ + + P V TY
Sbjct: 272 ------EQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTY 325
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+V++ LC G +++A +L EM G P +YN + K+ N A++L +M E
Sbjct: 326 NAVIRLLCELGEVDEAYNILNEMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDE 385
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL-CEKQKW 241
LC+PN H+YN+++ M +A+ R+D E+W+ ++ +Y ++IHGL C+K +
Sbjct: 386 -GLCLPNRHSYNMILKMLIAIGRVDRAIEVWDGMEKRGFHPGAATYAVMIHGLSCKKGRA 444
Query: 242 KEACQYFVEMIEKGLLPQKVT 262
+EAC YF+ M++ G+ P + T
Sbjct: 445 EEACSYFLRMVDDGIPPYQAT 465
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y + C A R L M R + PNV TYN ++ +C
Sbjct: 285 PDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCELGE------- 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVA 120
+ A + +EM G +PDV S++ +L+ + + + +L ++ M E G+C P
Sbjct: 338 ---VDEAYNILNEMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDE-GLCLPNRH 393
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+Y ++K L + GR++ A E+ M + G P A TY
Sbjct: 394 SYNMILKMLIAIGRVDRAIEVWDGMEKRGFHPGAATY 430
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I C++ +D A L EM G +P+V +YN LLN C+
Sbjct: 320 PNVFTYNAVIRLLCELGEVDEAYNILNEMATYGEKPDVWSYNTLLNTHCKL--------- 370
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A ++ M P+ S++++L + + +++ + M+++G P AT
Sbjct: 371 -KEVNKALRLISRMDEGLCLPNRHSYNMILKMLIAIGRVDRAIEVWDGMEKRGFHPGAAT 429
Query: 122 YTSVVKCL-CSCGRIEDAEELLGEMVRNGVSPSAET 156
Y ++ L C GR E+A MV +G+ P T
Sbjct: 430 YAVMIHGLSCKKGRAEEACSYFLRMVDDGIPPYQAT 465
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 92/255 (36%), Gaps = 71/255 (27%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA-------------------------- 120
F ++ Y+RA P ++ + M+ G PTVA
Sbjct: 150 FPLLFRAYARAGLPDDAIRAFSSMERFGFLPTVADLHSLLFTLSHNGLVEHAEAFFRESP 209
Query: 121 --------TYTSVVKCLCSCGRIEDAEELLGEMVRNGV---------------------- 150
TYT ++ + E A++L EM+ GV
Sbjct: 210 IQFDVSAKTYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVAL 269
Query: 151 --------------SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
+P A TY F + KDA A+++ +M+ L PN+ TYN +
Sbjct: 270 AQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSL-TPNVFTYNAV 328
Query: 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
I + L +D I N + D+ SY L++ C+ ++ +A + M E
Sbjct: 329 IRLLCELGEVDEAYNILNEMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDEGLC 388
Query: 257 LPQKVTFETLYRGLI 271
LP + ++ + + LI
Sbjct: 389 LPNRHSYNMILKMLI 403
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 156/282 (55%), Gaps = 11/282 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ + + L++G+CK ++D A + + EM ++G +PNVV+Y + C+
Sbjct: 268 DFQSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKL---------- 317
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K RN E +F EM+ + +P+V +++I +H +A + +L+ MK P + Y
Sbjct: 318 KDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFY 377
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+S++ L GR++DA ++ +M + GVSP TYN + A+KL R+M+E
Sbjct: 378 SSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEE 437
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D C P+I TY L+ M R+ +++ + NH+ + + +DL +Y +L+ GLC+ K +
Sbjct: 438 DS-CKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLE 496
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
AC +F EM+ KGL+P+ T++ L L Q+++ +++K
Sbjct: 497 LACSFFEEMVMKGLIPRDRTYKMLVEELEQNNLTEAKEKIQK 538
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 22/276 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRI-------DMAERFLGEMIER-GVEPNVVTYNVLLNGVCRR 52
M N++ Y SL+ + R+ D E F G IE+ GV ++ NVL++ + +
Sbjct: 191 MENLEGYVSLVTMKKVMRRLARAGNFQDAVEAFRG--IEKLGVRKDIEALNVLMDALVK- 247
Query: 53 ASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
E ++ +A F E + I D SF+I+LH Y +A K + ++ M +
Sbjct: 248 ---------EGSVEHAYSAFMEFK-DSIHVDFQSFNILLHGYCKARKLDDARKIMDEMDK 297
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
+G P V +YT ++ C + E + EM P+ TY F K N
Sbjct: 298 QGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNK 357
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A+++Y MK + CVP+ Y+ LI + R+ +++ +K + DL +Y +I
Sbjct: 358 ALEVYEMMKS-NCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMI 416
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
C + + A + M E P T+ L +
Sbjct: 417 TSACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLK 452
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+SLI+ + R+ A +M ++GV P+++TYN ++ C H E
Sbjct: 371 VPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACT----HLEEE 426
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
NA K+ M +PD+ +++ +L + R + ++ LN M + I +
Sbjct: 427 ------NALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLG 480
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +V LC G++E A EMV G+ P TY +E K+ + M
Sbjct: 481 TYVLLVGGLCKSGKLELACSFFEEMVMKGLIPRDRTYKMLVEELEQNNLTEAKEKIQKLM 540
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 145/274 (52%), Gaps = 12/274 (4%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
K Y+ L+ GW I A + EM RG +V+ YN LL +C+ +
Sbjct: 217 AKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGN--------- 267
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+ A K+F E+ G+EPD S++I + Y A+ L+ MK + P V TY
Sbjct: 268 -VDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYN 326
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++K LC G++EDA +LL EM+ GVSP A +YN + + N A KL M +D
Sbjct: 327 CIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKD 386
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ-KWK 242
+ C+P+ H+YN+L+ + + + R D EIW + + +Y+++IHGLC+K+ K +
Sbjct: 387 N-CLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLE 445
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
EAC+YF MI++G+ P T E L LI +L
Sbjct: 446 EACRYFETMIDEGIPPYASTIEMLRNRLIGFGLL 479
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +I CK +++ A + L EM+ERGV P+ +YN +L C +
Sbjct: 319 VPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSE------ 372
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K+ M PD S++++L + R + + + M E+G P+V+
Sbjct: 373 ----VNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVS 428
Query: 121 TYTSVVKCLC-SCGRIEDAEELLGEMVRNGVSPSAET 156
TY+ ++ LC G++E+A M+ G+ P A T
Sbjct: 429 TYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYAST 465
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y I +C+ N I L M + PNV TYN ++ +C+
Sbjct: 285 PDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGK------- 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A ++ EM RG+ PD S++ +L + + + ++ M + P +
Sbjct: 338 ---VEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHS 394
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
Y ++K L GR + A E+ M G PS TY+
Sbjct: 395 YNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYS 431
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 98/240 (40%), Gaps = 35/240 (14%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK---PQLSLDKLNF-------------- 109
+A + FD M G+ P V +L+V + Q D++
Sbjct: 166 DAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVR 225
Query: 110 -----------------MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
M+ +G V Y S+++ LC G +++A ++ E+ +GV P
Sbjct: 226 GWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEP 285
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
A +Y F + Y + + + +MK DL VPN+ TYN +I +++ ++
Sbjct: 286 DACSYAIFIRAYCEANNIHSVFSVLDRMKRYDL-VPNVFTYNCIIKKLCKNGKVEDAYQL 344
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ + + D SY ++ CE + A + M++ LP + ++ L + L++
Sbjct: 345 LHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVR 404
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
+V YSRA+ P ++ + M E G+ P+V ++ LC C ++ A++ + V++
Sbjct: 153 LVFRSYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFF-DRVKH 211
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
A+TY+ + + +A A K++ +M+ C ++ YN L+ +D
Sbjct: 212 KFEAKAKTYSILVRGWGDIGEAVEARKVFDEMRGRG-CALDVLAYNSLLEALCKGGNVDE 270
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+++ + + D SY + I CE M L+P T+ + +
Sbjct: 271 AYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIK 330
Query: 269 GLIQSDMLRTWRRLKKKLDEESIT 292
L ++ + +L ++ E ++
Sbjct: 331 KLCKNGKVEDAYQLLHEMMERGVS 354
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 152/274 (55%), Gaps = 11/274 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ + LI+G+CK ++D A + +GE+ + G+EP+V++Y + CR E
Sbjct: 310 NLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCR----------E 359
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K RN +KV +M +G +P+V +F+I++H +A + +L MK++G P + Y
Sbjct: 360 KDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFY 419
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+S++ L GR+ D +E++ +M + GV+P TYN A+ L +M+E
Sbjct: 420 SSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEE 479
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P++ TY+ L+ MF RM +++ + +H+ +++ ++ +Y +L+ GLCE K
Sbjct: 480 VS-CKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLH 538
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
AC +F EM+ K ++P+ TF+ L L + ML
Sbjct: 539 LACSFFGEMLSKAMVPKDSTFKMLKEELERKSML 572
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+SLI+ K R+ + + +M ++GV P+V+TYN L++ C H E
Sbjct: 413 VPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACA----HSQE- 467
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + +M +PD+ ++ +L ++ R + ++ L+ M + +
Sbjct: 468 -----ETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAG 522
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +V+ LC G++ A GEM+ + P T+ KE RK MK+ +
Sbjct: 523 TYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFK-MLKEELERKSMLEEMKIIENL 581
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 95/213 (44%), Gaps = 4/213 (1%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
S++ ++ + +A +L + ++ M ++ T + V++ L GR ++A +
Sbjct: 209 SYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNI 268
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP-NIHTYNILIGMFMALN 204
+ G+S N A ++R++K +P N+ ++N+LI +
Sbjct: 269 EKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELK---CSIPFNLASFNVLIHGYCKAK 325
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
++D +I V+ S L D+ SYT I C ++ ++ + V+M KG P +TF
Sbjct: 326 KLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFT 385
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
+ L ++ + ++ +K+ +E S F
Sbjct: 386 IIMHALGKAKQINEALKVYEKMKKEGCVPDSSF 418
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 152/274 (55%), Gaps = 11/274 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ + LI+G+CK ++D A + +GE+ + G+EP+V++Y + CR E
Sbjct: 333 NLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCR----------E 382
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K RN +KV +M +G +P+V +F+I++H +A + +L MK++G P + Y
Sbjct: 383 KDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFY 442
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+S++ L GR+ D +E++ +M + GV+P TYN A+ L +M+E
Sbjct: 443 SSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEE 502
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P++ TY+ L+ MF RM +++ + +H+ +++ ++ +Y +L+ GLCE K
Sbjct: 503 VS-CKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLH 561
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
AC +F EM+ K ++P+ TF+ L L + ML
Sbjct: 562 LACSFFGEMLSKAMVPKDSTFKMLKEELERKSML 595
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+SLI+ K R+ + + +M ++GV P+V+TYN L++ C H E
Sbjct: 436 VPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACA----HSQE- 490
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + +M +PD+ ++ +L ++ R + ++ L+ M + +
Sbjct: 491 -----ETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAG 545
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +V+ LC G++ A GEM+ + P T+ KE RK MK+ +
Sbjct: 546 TYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFK-MLKEELERKSMLEEMKIIENL 604
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 95/213 (44%), Gaps = 4/213 (1%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
S++ ++ + +A +L + ++ M ++ T + V++ L GR ++A +
Sbjct: 232 SYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNI 291
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP-NIHTYNILIGMFMALN 204
+ G+S N A ++R++K +P N+ ++N+LI +
Sbjct: 292 EKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELK---CSIPFNLASFNVLIHGYCKAK 348
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
++D +I V+ S L D+ SYT I C ++ ++ + V+M KG P +TF
Sbjct: 349 KLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFT 408
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
+ L ++ + ++ +K+ +E S F
Sbjct: 409 IIMHALGKAKQINEALKVYEKMKKEGCVPDSSF 441
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 153/286 (53%), Gaps = 11/286 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + LI+GWCK ++D A + + EM E G P+V++Y ++ CR E
Sbjct: 256 NPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCR----------E 305
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K R V +EM +G P+V +++IV+H + + +L+ MK P + Y
Sbjct: 306 KDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFY 365
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+S++ L GR++DA ++ +M + G P TYN A+KL +M+E
Sbjct: 366 SSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEE 425
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P+++TY+ L+ M NRM ++ + NH+ +++ L++ +Y++L+HGLC+ K +
Sbjct: 426 SS-CKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLE 484
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
AC +F EM+ KGL+P+ T + L + L + M+ R++K + +
Sbjct: 485 HACLFFEEMVSKGLVPKDCTHKLLLKELEKKSMVEAKERVEKLMSQ 530
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+SLIY K R+ A +M ++G P+V+TYN +++ C +H E
Sbjct: 359 VPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAAC----MHSQE- 413
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A K+ +M +PD+ ++S +L + R ++ ++ LN M + I V
Sbjct: 414 -----EDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVG 468
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
TY+ +V LC G++E A EMV G+ P T+
Sbjct: 469 TYSLLVHGLCKSGKLEHACLFFEEMVSKGLVPKDCTH 505
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 120/284 (42%), Gaps = 12/284 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y S++ K+ + D+ + EM G ++ T ++ + R + +
Sbjct: 156 YNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRW----------K 205
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + F M G++ D + + ++ + + + + D K+ I T+ ++
Sbjct: 206 DAIEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKD-SILLNPHTFNVLI 264
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C ++++A + + EM +G P +Y + Y KD + +M+E C
Sbjct: 265 HGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKG-C 323
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+ TY I++ + E++ +KGS D Y+ LI+ L + + K+A
Sbjct: 324 PPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARD 383
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
F +M ++G +P +T+ T+ +L K++E S
Sbjct: 384 VFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESS 427
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 145/272 (53%), Gaps = 12/272 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN K Y+ L+ GW + A + EM ERG +VV YN LL +C+ +
Sbjct: 189 MPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGN------ 242
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K+F EM G+ PD S+SI + Y + + L+ M+ + P V
Sbjct: 243 ----VDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVF 298
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +VK LC ++++A +LL EM+ GVSP +YN + + N A++L +M
Sbjct: 299 TYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRM 358
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ- 239
++++ C+P+ HTYN+++ M + + R D V ++W ++ +Y +++HG C+K+
Sbjct: 359 EKEN-CMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKG 417
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
K +EAC+YF MI+ G+ P T E L +I
Sbjct: 418 KLEEACKYFEMMIDDGIPPYSCTVELLRNRVI 449
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 127/260 (48%), Gaps = 12/260 (4%)
Query: 13 GWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
+C+ N A R +M + GV+ V + LL +C+R K ++ A++ F
Sbjct: 132 AYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKR----------KHVKQAQEFF 181
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
D++ V + P+ ++SI++ + + M+E+G V Y S+++ LC
Sbjct: 182 DKVNVE-VMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKG 240
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G +++A +L EM NG++P A +Y+ F + Y D + A ++ +M+ +L VPN+ T
Sbjct: 241 GNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNL-VPNVFT 299
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
YN ++ ++D ++ + + + DL SY + C+ + +A + M
Sbjct: 300 YNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRME 359
Query: 253 EKGLLPQKVTFETLYRGLIQ 272
++ +P + T+ + + L++
Sbjct: 360 KENCMPDRHTYNMVLKMLLR 379
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 99/219 (45%), Gaps = 4/219 (1%)
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
E R I P++ F ++ Y RA+ P ++ + M + G+ V ++ LC
Sbjct: 115 ETRCCEICPEI--FWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRK 172
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
++ A+E + V V P+A+TY+ + + D++ A KL+ +M+E C ++ Y
Sbjct: 173 HVKQAQEFF-DKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERG-CAVDVVAY 230
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N L+ +D +++ + + L D SY++ I CE A Q M
Sbjct: 231 NSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRR 290
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
L+P T+ + + L +S+ + +L ++ E ++
Sbjct: 291 YNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVS 329
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 153/286 (53%), Gaps = 12/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YTSL++GWC+ I AE +M E GV+PNV TY+++++ +CR
Sbjct: 245 PDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQ------- 297
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A VF EM G +P+ +F+ ++ V+ +A + + L N MK G +
Sbjct: 298 ---ITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTIS 354
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +++A ++L MV+ GV+P+A T+N F D NGA ++Y +MK
Sbjct: 355 YNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMK 414
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C+PN TYNIL+ MF +DMV ++ + SE+ ++++Y +LI CEK W
Sbjct: 415 ELK-CMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHW 473
Query: 242 KEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A EM+ EK L P +ET+ L + L+ L +K+
Sbjct: 474 NNAYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKM 519
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 134/290 (46%), Gaps = 16/290 (5%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RRASLHPNERF 61
V ++ L+ + + A M + G +P+ V+++++++ +C RRAS
Sbjct: 178 VSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRAS------- 230
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE FD ++ + EPDV ++ ++H + RA + + + MKE G+ P V T
Sbjct: 231 -----EAELFFDSLKHK-FEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYT 284
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ V+ LC CG+I A ++ EM+ G P+A T+N + + +++Y QMK
Sbjct: 285 YSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMK 344
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C + +YN LI +D ++ + + + + ++ + + E
Sbjct: 345 RLG-CAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDV 403
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + + +M E +P +T+ L R S + +LKK++DE +
Sbjct: 404 NGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEV 453
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 35/255 (13%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG------------- 114
A + D M+ RG+ V++FS+++ Y RA ++ N M++ G
Sbjct: 162 AWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVIS 221
Query: 115 -IC--------------------PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+C P V YTS+V C G I AEE+ +M GV P+
Sbjct: 222 SLCKKRRASEAELFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPN 281
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
TY+ A ++ +M D C PN T+N L+ + + R + V +++
Sbjct: 282 VYTYSIVIDSLCRCGQITRAHDVFSEMI-DAGCDPNAVTFNSLMRVHVKAGRTEKVLQVY 340
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
N +K D SY LI C+ + EA + M++KG+ P TF +++ + +
Sbjct: 341 NQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAEL 400
Query: 274 DMLRTWRRLKKKLDE 288
+ R+ K+ E
Sbjct: 401 HDVNGAHRMYAKMKE 415
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 20/157 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + S+ +++ ++ A R +M E PN +TYN+L+
Sbjct: 385 PNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFAD---------- 434
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-SRAHKPQLSLDKLNFMKE----KGIC 116
K+I K+ EM +EP+V ++ I++ ++ + H + N MKE K +
Sbjct: 435 SKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWN----NAYNLMKEMVEEKCLK 490
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG-VSP 152
P ++ Y +V++ L + G+++ EEL+ +MV G VSP
Sbjct: 491 PNLSIYETVLELLRNAGQLKKHEELVEKMVARGFVSP 527
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 145/272 (53%), Gaps = 12/272 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN K Y+ L+ GW + A + EM ERG +VV YN LL +C+ +
Sbjct: 216 MPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGN------ 269
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K+F EM G+ PD S+SI + Y + + L+ M+ + P V
Sbjct: 270 ----VDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVF 325
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +VK LC ++++A +LL EM+ GVSP +YN + + N A++L +M
Sbjct: 326 TYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRM 385
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ- 239
++++ C+P+ HTYN+++ M + + R D V ++W ++ +Y +++HG C+K+
Sbjct: 386 EKEN-CMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKG 444
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
K +EAC+YF MI+ G+ P T E L +I
Sbjct: 445 KLEEACKYFEMMIDDGIPPYSCTVELLRNRVI 476
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 131/268 (48%), Gaps = 12/268 (4%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
+++ + +C+ N A R +M + GV+ V + LL +C+R K
Sbjct: 151 EIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKR----------KH 200
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
++ A++ FD++ V + P+ ++SI++ + + M+E+G V Y S
Sbjct: 201 VKQAQEFFDKVNVE-VMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNS 259
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
+++ LC G +++A +L EM NG++P A +Y+ F + Y D + A ++ +M+ +
Sbjct: 260 LLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYN 319
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
L VPN+ TYN ++ ++D ++ + + + DL SY + C+ + +A
Sbjct: 320 L-VPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKA 378
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ M ++ +P + T+ + + L++
Sbjct: 379 LRLISRMEKENCMPDRHTYNMVLKMLLR 406
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 99/219 (45%), Gaps = 4/219 (1%)
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
E R I P++ F ++ Y RA+ P ++ + M + G+ V ++ LC
Sbjct: 142 ETRCCEICPEI--FWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRK 199
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
++ A+E + V V P+A+TY+ + + D++ A KL+ +M+E C ++ Y
Sbjct: 200 HVKQAQEFF-DKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERG-CAVDVVAY 257
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N L+ +D +++ + + L D SY++ I CE A Q M
Sbjct: 258 NSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRR 317
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
L+P T+ + + L +S+ + +L ++ E ++
Sbjct: 318 YNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVS 356
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 143/272 (52%), Gaps = 12/272 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ K Y+ L+ GW +I A + EM+E +++ YN LL+ +C+
Sbjct: 205 VPSAKTYSILVRGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGD------ 258
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K+F EM G++PD SF+I +H Y A + L+ MK + P V
Sbjct: 259 ----VDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVY 314
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++K LC +++DA LL EM++ G +P TYN + + N A KL +M
Sbjct: 315 TFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM 374
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ- 239
C+P+ HTYN+++ + + + R D V EIW + + + +YT++IHGL K+
Sbjct: 375 DRTK-CLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMSERKFYPTVATYTVMIHGLVRKKG 433
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
K +EAC+YF MI++G+ P T E L L+
Sbjct: 434 KLEEACRYFEMMIDEGIPPYSTTVEMLRNRLV 465
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 120/268 (44%), Gaps = 11/268 (4%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
K++ + + + N A R M+E G++P V + LL+ +C R K
Sbjct: 139 KVFWIVFRAYSRANLPSEASRAFNRMVEFGIKPCVDDLDQLLHSLCDR----------KH 188
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ +A++ FD+ + GI P ++SI++ ++R + + M E + Y +
Sbjct: 189 VNHAQEFFDKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENNCVVDLLAYNA 248
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ LC G ++ A ++ EM G+ P A ++ F Y D + A ++ +MK D
Sbjct: 249 LLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYD 308
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
L VPN++T+N +I ++D + + + D +Y ++ C+ + A
Sbjct: 309 L-VPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRA 367
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ M LP + T+ + + LI+
Sbjct: 368 TKLLSRMDRTKCLPDRHTYNMVLKLLIR 395
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F IV YSRA+ P + N M E GI P V ++ LC + A+E +
Sbjct: 141 FWIVFRAYSRANLPSEASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAK 200
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G+ PSA+TY+ + + +DA+GA K++ +M E++ CV ++ YN L+ +
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENN-CVVDLLAYNALLDALCKSGDV 259
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D +++ + L D S+ + IH C+ A Q M L+P TF +
Sbjct: 260 DGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHI 319
Query: 267 YRGLIQSD 274
+ L +++
Sbjct: 320 IKTLCKNE 327
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 148/291 (50%), Gaps = 12/291 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ K Y+ L+ GW +I A + EM+ER +++ YN LL+ +C+
Sbjct: 205 VPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD------ 258
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ K+F EM G++PD SF+I +H Y A + L+ MK + P V
Sbjct: 259 ----VDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVY 314
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++K LC +++DA LL EM++ G +P TYN + + N A KL +M
Sbjct: 315 TFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM 374
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ- 239
C+P+ HTYN+++ + + + R D EIW + + + +YT++IHGL K+
Sbjct: 375 DRTK-CLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKG 433
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
K +EAC+YF MI++G+ P T E L L+ + L K++ S
Sbjct: 434 KLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSS 484
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F IV YSRA+ P + N M E GI P V ++ LC + A+E G+
Sbjct: 141 FWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK 200
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G+ PSA+TY+ + + +DA+GA K++ +M E + CV ++ YN L+ +
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERN-CVVDLLAYNALLDALCKSGDV 259
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D +++ + L D S+ + IH C+ A + M L+P TF +
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 267 YRGLIQSD 274
+ L +++
Sbjct: 320 IKTLCKNE 327
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 119/268 (44%), Gaps = 11/268 (4%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
K++ + + + N A R M+E G++P V + LL+ +C + K
Sbjct: 139 KVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDK----------KH 188
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ +A++ F + + GI P ++SI++ ++R + + M E+ + Y +
Sbjct: 189 VNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNA 248
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ LC G ++ ++ EM G+ P A ++ F Y D + A K+ +MK D
Sbjct: 249 LLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYD 308
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
L VPN++T+N +I ++D + + + D +Y ++ C+ + A
Sbjct: 309 L-VPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRA 367
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ M LP + T+ + + LI+
Sbjct: 368 TKLLSRMDRTKCLPDRHTYNMVLKLLIR 395
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 146/270 (54%), Gaps = 12/270 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
K Y+ LI GW +I + A M+E+G +++ YN LL +C+
Sbjct: 215 TAKTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGR-------- 266
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A+ +F +M + +EPD ++SI +H Y A Q + L+ M+ + P V TY
Sbjct: 267 --VDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTY 324
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++K LC +E+A +LL EM+ GV P +YN + + N A++L +M E
Sbjct: 325 NCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRM-E 383
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ-KW 241
D+C+P+ HTYN+++ + + + R D V E+W ++ + + +Y+++IHG C+K+ K
Sbjct: 384 KDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKL 443
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+EAC+YF MI++G+ P T E L L+
Sbjct: 444 EEACKYFEMMIDEGIPPYVTTVEMLRNRLL 473
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 125/271 (46%), Gaps = 14/271 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N +++ + + + N D A R M E GV+P + + LL +C+R
Sbjct: 146 NSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTIHDLDKLLFILCKR---------- 195
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT-VAT 121
K ++ A+++F + + R ++SI++ + + + D M E+G CP +
Sbjct: 196 KHVKQAQQLFHQAKNR-FSLTAKTYSILISGWGEIGDSEKACDLFQAMLEQG-CPVDLLA 253
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ LC GR+++A+ + +M+ V P A TY+ F Y D A ++ +M+
Sbjct: 254 YNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMR 313
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+L +PN+ TYN +I ++ ++ + + + D SY + C+ +
Sbjct: 314 RYNL-LPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEV 372
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
A + M + LP + T+ + + LI+
Sbjct: 373 NRALRLMFRMEKDICLPDRHTYNMVLKLLIR 403
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 12/209 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y+ I+ +C + + A R L +M + PNV TYN ++ +C+ NE
Sbjct: 284 PDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCK------NEHV 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVA 120
E+ A ++ DEM RG++PD S++ + Y H +L F EK IC P
Sbjct: 338 EE----AYQLLDEMISRGVKPDTWSYNAI-QAYHCDHCEVNRALRLMFRMEKDICLPDRH 392
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY V+K L GR + E+ MV PS TY+ + +K Y +M
Sbjct: 393 TYNMVLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEM 452
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMV 209
D+ P + T +L + L +D +
Sbjct: 453 MIDEGIPPYVTTVEMLRNRLLGLGFIDHI 481
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F ++ YS+A+ P ++ N M E G+ PT+ ++ LC ++ A++L +
Sbjct: 150 FWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQ-A 208
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+N S +A+TY+ + D+ A L++ M E C ++ YN L+ R+
Sbjct: 209 KNRFSLTAKTYSILISGWGEIGDSEKACDLFQAMLEQG-CPVDLLAYNNLLQALCKGGRV 267
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D + I++ + + D +Y++ IH C+ + A + +M LLP T+ +
Sbjct: 268 DEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCI 327
Query: 267 YRGLIQSDMLRTWRRLKKKLDE 288
+ L +++ + +L LDE
Sbjct: 328 IKQLCKNEHVEEAYQL---LDE 346
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +I CK ++ A + L EMI RGV+P+ +YN + C
Sbjct: 318 LPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCE------ 371
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++ M PD ++++VL + R + + M +K P+V+
Sbjct: 372 ----VNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVDKKFYPSVS 427
Query: 121 TYTSVVKCLC-SCGRIEDAEELLGEMVRNGVSPSAET 156
TY+ ++ C G++E+A + M+ G+ P T
Sbjct: 428 TYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTT 464
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 153/286 (53%), Gaps = 12/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YTSL++GWC+ I AE +M G++PNV TY+++++ +CR
Sbjct: 280 PDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQ------- 332
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A VF EM G +P+ +F+ ++ V+ +A + + L N MK G +
Sbjct: 333 ---ITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTIS 389
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +E+A ++L MV+ GV+P+A T+N F D NGA ++Y +MK
Sbjct: 390 YNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMK 449
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + C PN TYNIL+ MF DMV ++ + S++ ++++Y +LI C+ + W
Sbjct: 450 ELN-CQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHW 508
Query: 242 KEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A + +EM+ EK L P +ET+ L ++ L+ L K+
Sbjct: 509 NNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHEELVDKM 554
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 130/289 (44%), Gaps = 12/289 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
V +++L+ + + A M + G P++V ++++++ +C++
Sbjct: 212 TVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKK---------- 261
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A+ FD ++ R EPDV ++ ++H + RA + + + MK GI P V TY
Sbjct: 262 RRANEAQSFFDSLKHR-FEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTY 320
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ V+ LC CG+I A ++ EM+ G P+A T+N + + +K+Y QMK
Sbjct: 321 SIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKR 380
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C + +YN +I ++ +I N + + + ++ + + +
Sbjct: 381 LG-CPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVN 439
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + + M E P +T+ L R +S ++KK++DE +
Sbjct: 440 GAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQV 488
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 97/234 (41%), Gaps = 35/234 (14%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG------------- 114
A V D M+ RG+E V +FS ++ Y RA ++ N M++ G
Sbjct: 197 AWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVIS 256
Query: 115 -IC--------------------PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+C P V YTS+V C G I AEE+ +M G+ P+
Sbjct: 257 SLCKKRRANEAQSFFDSLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPN 316
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
TY+ A ++ +M D C PN T+N L+ + + R + V +++
Sbjct: 317 VYTYSIVIDSLCRCGQITRAHDVFSEMI-DAGCDPNAVTFNSLMRVHVKAGRTEKVLKVY 375
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
N +K D SY +I C + +EA + M++KG+ P TF ++
Sbjct: 376 NQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIF 429
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 21/154 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + + K++ ++ A R M E +PN +TYN+L+ + R
Sbjct: 420 PNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMR-------MFAESRS 472
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY------SRAHKPQLSLDKLNFMKEKGI 115
+ +K DE +V EP+V ++ I++ ++ + A+K + + ++EK +
Sbjct: 473 TDMVLKMKKEMDESQV---EPNVNTYRILISMFCDMKHWNNAYKLMMEM-----VEEKCL 524
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
P ++ Y +V++ L G+++ EEL+ +MV G
Sbjct: 525 RPNLSVYETVLELLRKAGQLKKHEELVDKMVARG 558
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 154/297 (51%), Gaps = 12/297 (4%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
K Y+ LI GW I + A M+E+G +++ YN LL +C+
Sbjct: 216 AKTYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGG---------- 265
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+ A+ +F +M + +EPD ++SI +H Y A Q +L L+ M+ I P V TY
Sbjct: 266 CVDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYN 325
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++K LC +E+A LL EM+ GV P +YN + + N A++L +M++D
Sbjct: 326 CIIKRLCKNEHVEEAYLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKD 385
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ-KWK 242
+ C+P+ HTYN+++ + + + R D V ++W ++ + + +Y+++IHG C+K+ K +
Sbjct: 386 N-CLPDRHTYNMVLKLLIRIGRFDKVTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLE 444
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
EAC+YF MI++G+ P T E L L+ L L K+ + + E N
Sbjct: 445 EACKYFEMMIDEGIPPYVTTVEMLRNQLLGLGFLDHIEILAAKMRQSTSYAIQELAN 501
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 12/209 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y+ I+ +C + + A R L +M + PNV TYN ++ +C+ NE
Sbjct: 284 PDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCK------NEHV 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVA 120
E+ A + DEM RG+ PD S++ + Y H +L F EK C P
Sbjct: 338 EE----AYLLLDEMISRGVRPDTWSYN-AIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRH 392
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY V+K L GR + ++ G M PS TY+ + +K Y +M
Sbjct: 393 TYNMVLKLLIRIGRFDKVTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEM 452
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMV 209
D+ P + T +L + L +D +
Sbjct: 453 MIDEGIPPYVTTVEMLRNQLLGLGFLDHI 481
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F ++ YS+A+ P ++ N M E GI PT+ + ++ LC ++ A++ +
Sbjct: 150 FWLIFRAYSQANLPDGAIRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQ-A 208
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+N +A+TY+ + D+ A +L++ M E C ++ YN L+ +
Sbjct: 209 KNRFLLTAKTYSILISGWGDIGDSEKAHELFQAMLEQG-CPVDLLAYNNLLQALCKGGCV 267
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D + I++ + + D +Y++ IH C+ + A + +M +LP T+ +
Sbjct: 268 DEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCI 327
Query: 267 YRGLIQSD 274
+ L +++
Sbjct: 328 IKRLCKNE 335
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +I CK ++ A L EMI RGV P+ +YN + C
Sbjct: 318 LPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRGVRPDTWSYNAIQAYHCDHCE------ 371
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++ M PD ++++VL + R + M +K P+V+
Sbjct: 372 ----VNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDKVTKVWGNMGDKKFYPSVS 427
Query: 121 TYTSVVKCLC-SCGRIEDAEELLGEMVRNGVSPSAET 156
TY+ ++ C G++E+A + M+ G+ P T
Sbjct: 428 TYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTT 464
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 147/282 (52%), Gaps = 12/282 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT+L+ GWC+ I AER EM G PNV TY ++++ +CR
Sbjct: 244 PDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQ------- 296
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A VF EM G EP+ +F+ +L V+ +A + + L N MK G P T
Sbjct: 297 ---ITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVT 353
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C G +++A ++L MV+ G SP+A T+N F +D NGA +LY +MK
Sbjct: 354 YNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMK 413
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C N TYNIL+ MF+ DMV ++ + ++ ++++Y +LI C W
Sbjct: 414 ELK-CKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHW 472
Query: 242 KEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
A ++F EM+ EK L P +E + + L ++ L+ L
Sbjct: 473 NNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQLKKHEEL 514
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 128/289 (44%), Gaps = 12/289 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+++ ++ LI + + A M + +P+ + +++L++ +CR+
Sbjct: 176 SIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRK---------- 225
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A+ FD ++ + EPDV ++ ++ + RA + MK G P V TY
Sbjct: 226 RRATEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTY 284
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T V+ LC CG+I A ++ EM+ G P++ T+N + + +++Y QMK
Sbjct: 285 TIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKR 344
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P+ TYN LI +D ++ N + + ++ L + + +
Sbjct: 345 MG-CPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVN 403
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + + +M E VT+ L R + + +LKK++DE+ +
Sbjct: 404 GAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDV 452
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 119/282 (42%), Gaps = 12/282 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +I K+ D+ + + M R VE ++ T+++L+ R
Sbjct: 145 YNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAG----------LAS 194
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A F+ M +PD +FSI++ + R + + + +K+K P V YT++V
Sbjct: 195 EAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDK-FEPDVIVYTNLV 253
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ C G I +AE + EM G P+ TY A ++ +M D C
Sbjct: 254 RGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEML-DVGC 312
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN T+N L+ + + R + V +++N +K D +Y LI C+ EA +
Sbjct: 313 EPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALK 372
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
M++KG P TF L+ + + + RL K+ E
Sbjct: 373 VLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKE 414
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 154/286 (53%), Gaps = 12/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT+L+ GWC+ I AER GEM G++PNV TY+++++ +CR
Sbjct: 196 PDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQ------- 248
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A +F EM G +P+ +++ ++ ++ +A + + L N MK G P T
Sbjct: 249 ---ITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVT 305
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +EDA +++G M + G +P+A T+N F D N A ++Y++MK
Sbjct: 306 YNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMK 365
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + C N TYN L+ MF+A DMV ++ + +++ ++++Y +LI C W
Sbjct: 366 ELN-CEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHW 424
Query: 242 KEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A ++F EMI EK L P ++ + + L ++ L+ L +K+
Sbjct: 425 NNAYKFFREMIDEKCLRPSLPVYDMVLQQLRKAGQLKKHEELVEKM 470
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 129/284 (45%), Gaps = 16/284 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y ++ ++ D+A F+ M R V+ V T+ +L+ R+ +
Sbjct: 97 YNEMVDFSGQVMMFDVAWYFIDLMKARNVDVTVETFLILM------------RRYVRAGL 144
Query: 67 NAEKV--FDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
AE + F+ M +PD +FSI++ + R + + + + +K+K P V YT+
Sbjct: 145 AAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDK-FEPDVIVYTN 203
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
+V+ C G I +AE + GEM G+ P+ TY+ A ++ +M D
Sbjct: 204 LVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEML-DA 262
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
C PN TYN L+ + + R + V +++N +K D +Y LI C+ + ++A
Sbjct: 263 GCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDA 322
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ M +KG P TF TL+ + + + R+ KK+ E
Sbjct: 323 IKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKE 366
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 12/265 (4%)
Query: 27 LGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTS 86
M + +P+ + +++L++ +CR E+ A++ FD ++ + EPDV
Sbjct: 152 FNRMEDYNCKPDKIAFSILISILCR----------ERRASQAQEFFDSLKDK-FEPDVIV 200
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
++ ++ + RA + MK GI P V TY+ V+ LC CG+I A ++ EM+
Sbjct: 201 YTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEML 260
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G P++ TYN + + +++Y QMK C P+ TYN LI +
Sbjct: 261 DAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLG-CEPDTVTYNFLIETHCKDENL 319
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ + + ++ L + + A + + +M E VT+ TL
Sbjct: 320 EDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTL 379
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESI 291
+ + S +LK ++DE I
Sbjct: 380 MKMFVASKSTDMVLKLKTEMDENKI 404
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 149/287 (51%), Gaps = 12/287 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ K Y+ L+ GW K + A EM+E G +P+VVTY ++++ +C+
Sbjct: 178 VPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGR------ 231
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A +V EM V P +S+++H Y H+ + ++D M +KGI V
Sbjct: 232 ----VDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADVV 287
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C + ++ +L EM NGV+P++ T N G+ + A +++ +M
Sbjct: 288 AYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRM 347
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ LC P+ TY ++I MF N ++M +IW ++K + + +++ LI GLCEK
Sbjct: 348 IK--LCEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDN 405
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+AC EMIEKG+ P ++TF L + LI+ + L +K++
Sbjct: 406 AAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLKFLHEKMN 452
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 123/271 (45%), Gaps = 19/271 (7%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFD---EMRVRGIEPDVTSFS 88
+RG ++ Y++++ + + IR + V+D MR +G+ +V +F
Sbjct: 71 QRGYSHSIRAYHLMIESLAK-------------IRQYQIVWDLVSAMRKKGM-LNVETFC 116
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
I++ Y+RA+K ++ N M + + P +A + ++ LC + A+E+ M +
Sbjct: 117 IMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAM-KG 175
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
P ++Y+ + + + A +++R+M E C P++ TY I++ + R+D
Sbjct: 176 QFVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAG-CDPDVVTYGIMVDVLCKAGRVDE 234
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
E+ + Y++L+H + + ++A F+EM +KG+ V + L
Sbjct: 235 AVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIG 294
Query: 269 GLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ + + R+ K+++ + S N
Sbjct: 295 AFCKVNKFKNVHRVLKEMESNGVAPNSRTCN 325
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 140/267 (52%), Gaps = 14/267 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+VK Y+ L GW + + A++ EM ERG +V+ YN LL +C+ +R
Sbjct: 218 PSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCK-----GGKRD 272
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A K+F EM G++PD ++SI + + + L K K + P V T
Sbjct: 273 E-----AYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFT 327
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V+K LC +E+A ++L EM+ GV+P +YN + + N A+ L ++M
Sbjct: 328 YNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMD 387
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D CVP+ HTYN+++ + + + R D E+W + + +Y ++IHG C K+KW
Sbjct: 388 RDK-CVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFC-KKKW 445
Query: 242 K--EACQYFVEMIEKGLLPQKVTFETL 266
K EAC+YF MI++G+ P T E L
Sbjct: 446 KLEEACKYFEMMIDEGIPPYIATVELL 472
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 104/244 (42%), Gaps = 47/244 (19%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82
A R M E G+ V + LL +C+R K + +A++ FD+++ P
Sbjct: 170 AIRAFNRMGEFGIRAGVDDLDKLLYTLCKR----------KHVAHAQQFFDKVK-SVFNP 218
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
V ++SI+ + + + M+E+G V Y S+++ LC G+ ++A ++
Sbjct: 219 SVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMF 278
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
EM NGV P A+TY+ F + D + ++ + K +L +PN+ TYN +I
Sbjct: 279 LEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNL-LPNVFTYNCVI----- 332
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
LC+ Q +EA Q EMIE+G+ P +
Sbjct: 333 ------------------------------KKLCKDQNVEEAYQILDEMIERGVTPDTWS 362
Query: 263 FETL 266
+ +
Sbjct: 363 YNAI 366
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 103/234 (44%), Gaps = 9/234 (3%)
Query: 75 MRVRGIEPDVTSFSIVLHV---YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCS 131
+ +R V + + HV YSRA PQ ++ N M E GI V ++ LC
Sbjct: 139 IEIRETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCK 198
Query: 132 CGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIH 191
+ A++ + V++ +PS +TY+ + + D+N A K++ +M+E C+ ++
Sbjct: 199 RKHVAHAQQFF-DKVKSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERG-CLIDVL 256
Query: 192 TYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251
YN L+ + D +++ + + + D D+Y++ I C++ +
Sbjct: 257 AYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERT 316
Query: 252 IEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS----EFQNYH 301
K LLP T+ + + L + + ++ ++ E +T + Q YH
Sbjct: 317 KRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYH 370
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +I CK ++ A + L EMIERGV P+ +YN + C +
Sbjct: 322 LPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSE------ 375
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +A + M PD ++++VL + R + + + M ++G P+V+
Sbjct: 376 ----VNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVS 431
Query: 121 TYTSVVKCLCSCG-RIEDAEELLGEMVRNGVSPSAET 156
TY ++ C ++E+A + M+ G+ P T
Sbjct: 432 TYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIAT 468
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 88/208 (42%), Gaps = 3/208 (1%)
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE-KGICPTVATYTSVVKCLCSCGR 134
R+ G EP S+ IV+ + + + + D L ++E + T + V
Sbjct: 107 RIPGFEPSDDSYHIVVDILGGSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADL 166
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+DA M G+ + + RK A + + ++K + P++ TY+
Sbjct: 167 PQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKS--VFNPSVKTYS 224
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
IL + + + +++++ ++ +D+ +Y L+ LC+ K EA + F+EM
Sbjct: 225 ILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSN 284
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRL 282
G+ P T+ R Q + L T R+
Sbjct: 285 GVDPDADTYSIFIRSSCQENDLHTVYRV 312
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 140/267 (52%), Gaps = 14/267 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+VK Y+ L GW + + A++ EM ERG +V+ YN LL +C+ +R
Sbjct: 218 PSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCK-----GGKRD 272
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A K+F EM G++PD ++SI + + + L K K + P V T
Sbjct: 273 E-----AYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFT 327
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V+K LC +E+A ++L EM+ GV+P +YN + + N A+ L ++M
Sbjct: 328 YNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMD 387
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D CVP+ HTYN+++ + + + R D E+W + + +Y ++IHG C K+KW
Sbjct: 388 RDK-CVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFC-KKKW 445
Query: 242 K--EACQYFVEMIEKGLLPQKVTFETL 266
K EAC+YF MI++G+ P T E L
Sbjct: 446 KLEEACKYFEMMIDEGIPPYIATVELL 472
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 104/244 (42%), Gaps = 47/244 (19%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82
A R M E G+ V + LL +C+R K + +A++ FD+++ P
Sbjct: 170 AIRAFNRMGEFGIRAGVDDLDKLLYTLCKR----------KHVAHAQQFFDKVK-SVFNP 218
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
V ++SI+ + + + M+E+G V Y S+++ LC G+ ++A ++
Sbjct: 219 SVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMF 278
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
EM NGV P A+TY+ F + D + ++ + K +L +PN+ TYN +I
Sbjct: 279 LEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNL-LPNVFTYNCVI----- 332
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
LC+ Q +EA Q EMIE+G+ P +
Sbjct: 333 ------------------------------KKLCKDQNVEEAYQILDEMIERGVTPDTWS 362
Query: 263 FETL 266
+ +
Sbjct: 363 YNAI 366
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 103/234 (44%), Gaps = 9/234 (3%)
Query: 75 MRVRGIEPDVTSFSIVLHV---YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCS 131
+ +R V + + HV YSRA PQ ++ N M E GI V ++ LC
Sbjct: 139 IEIRETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCK 198
Query: 132 CGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIH 191
+ A++ + V++ +PS +TY+ + + D+N A K++ +M+E C+ ++
Sbjct: 199 RKHVAHAQQFF-DKVKSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERG-CLIDVL 256
Query: 192 TYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251
YN L+ + D +++ + + + D D+Y++ I C++ +
Sbjct: 257 AYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERT 316
Query: 252 IEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS----EFQNYH 301
K LLP T+ + + L + + ++ ++ E +T + Q YH
Sbjct: 317 KRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYH 370
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +I CK ++ A + L EMIERGV P+ +YN + C +
Sbjct: 322 LPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSE------ 375
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +A + M PD ++++VL + R + + + M ++G P+V+
Sbjct: 376 ----VNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVS 431
Query: 121 TYTSVVKCLCSCG-RIEDAEELLGEMVRNGVSPSAET 156
TY ++ C ++E+A + M+ G+ P T
Sbjct: 432 TYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIAT 468
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 88/208 (42%), Gaps = 3/208 (1%)
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE-KGICPTVATYTSVVKCLCSCGR 134
R+ G EP S+ IV+ + + + + D L ++E + T + V
Sbjct: 107 RIPGFEPSDDSYHIVVDILGSSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADL 166
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+DA M G+ + + RK A + + ++K + P++ TY+
Sbjct: 167 PQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKS--VFNPSVKTYS 224
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
IL + + + +++++ ++ +D+ +Y L+ LC+ K EA + F+EM
Sbjct: 225 ILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSN 284
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRL 282
G+ P T+ R Q + L T R+
Sbjct: 285 GVDPDADTYSIFIRSSCQENDLHTVYRV 312
>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 143/269 (53%), Gaps = 22/269 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ + L+ GW ++ AE F+ EM E GVEP+VVTYN L++ C+
Sbjct: 197 PNLQTFNILLSGW---KNVEDAELFVNEMKEMGVEPDVVTYNSLVDVYCK---------- 243
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I A KVFDEMR + + PDV +++ V+ +P + D L MKE G+ P V
Sbjct: 244 GREIEKAYKVFDEMREKDLSPDVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPA 303
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + ++ C R+ A EL+ EMV G+SP+A TYN FF+ + D + LY++M
Sbjct: 304 YNAAIRNYCIAKRLGIAFELVDEMVNKGLSPNATTYNLFFRVFYWSNDLQSSWNLYKRMM 363
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM----LIHGLCE 237
+ C+P + LI +F +M+M ++W + G SYT+ L LC+
Sbjct: 364 GEG-CLPYTQSCMFLIRLFKRHEKMEMALQLWGEMVEKGFG----SYTLVSDVLFDMLCD 418
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETL 266
K EA + F+EMIEKG P V+F+ +
Sbjct: 419 MGKLMEAEKCFLEMIEKGQRPSNVSFKRI 447
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 5/173 (2%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P + T+ + L +EDAE + EM GV P TYN Y ++ A K+
Sbjct: 197 PNLQTFNIL---LSGWKNVEDAELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKV 253
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+ +M+E DL P++ TY +IG + + D R++ +K + D+ +Y I C
Sbjct: 254 FDEMREKDLS-PDVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYC 312
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRLKKKLDE 288
++ A + EM+ KGL P T+ +R S D+ +W K+ + E
Sbjct: 313 IAKRLGIAFELVDEMVNKGLSPNATTYNLFFRVFYWSNDLQSSWNLYKRMMGE 365
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 141/263 (53%), Gaps = 12/263 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
K Y+ LI GW KI A M+E+G +++ YN LL +C+ H +E
Sbjct: 212 TTKTYSILINGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGG--HVDE--- 266
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A ++M + +EPD ++SI + Y A+ + L+ M+ + P V TY
Sbjct: 267 -----AMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTY 321
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++K LC ++E+A +LL EM+ +G+ P +YN + + N A+KL +M E
Sbjct: 322 NCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRM-E 380
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ-KW 241
D+C P+ HTYN+++ + + + R D E+W + + + +Y+++IHGLC+K+ K
Sbjct: 381 KDVCFPDRHTYNMVLKLLIRIGRFDKATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKL 440
Query: 242 KEACQYFVEMIEKGLLPQKVTFE 264
+EAC+YF MI++G+ P T E
Sbjct: 441 EEACKYFAMMIDEGIPPYDTTIE 463
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 12/205 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +I CKI +++ A + L EMI G++P+ +YN + C
Sbjct: 315 LPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCE------ 368
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K+ M PD ++++VL + R + + + M +K P+V+
Sbjct: 369 ----VNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATEVWECMGDKKFYPSVS 424
Query: 121 TYTSVVKCLC-SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY+ ++ LC G++E+A + M+ G+ P T G + L +
Sbjct: 425 TYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPPYDTTIEMLRNRLLGLGLLDNIEILAAK 484
Query: 180 MKEDDLCVPNIHTYNILIGMFMALN 204
M++ C NI+IG A N
Sbjct: 485 MRQSTSCSIQ-ELANIMIGARSAQN 508
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y+ I +C N + A L +M + PNV TYN ++ +C+
Sbjct: 281 PDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKI--------- 331
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVA 120
K + A ++ DEM G++PD S++ + Y H KL EK +C P
Sbjct: 332 -KKVEEAYQLLDEMISSGLKPDTWSYN-AIQAYHCDHCEVNRALKLISRMEKDVCFPDRH 389
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
TY V+K L GR + A E+ M PS TY+
Sbjct: 390 TYNMVLKLLIRIGRFDKATEVWECMGDKKFYPSVSTYS 427
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 76/184 (41%), Gaps = 2/184 (1%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F I+ YSRA P ++ M E GI P++ ++ LC + A++ + V
Sbjct: 147 FWIIFTAYSRADLPDGAIRSFVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQ-V 205
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
++ + +TY+ + D+ A +L+ M E C ++ YN L+ +
Sbjct: 206 KSHFLLTTKTYSILINGWGKIGDSGKARELFDAMLEQG-CHVDLLAYNNLLEALCKGGHV 264
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D + N + ++ D +Y++ I C+ A +M LLP T+ +
Sbjct: 265 DEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCI 324
Query: 267 YRGL 270
+ L
Sbjct: 325 IKRL 328
>gi|218202055|gb|EEC84482.1| hypothetical protein OsI_31142 [Oryza sativa Indica Group]
Length = 586
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 139/265 (52%), Gaps = 11/265 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ K YT LI GW + + + A EM+ERGVE +V YN L++ +CR + +
Sbjct: 230 SAKAYTILISGWAVVKKPENARSLFDEMVERGVELDVHVYNALIDALCRGGDITSAQ--- 286
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
E++ + + G+ P+ ++ LH + + +L L+ M + P V TY
Sbjct: 287 ------EQLSNMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTY 340
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+V++ LC G I +A +L E+ G P +YN + K+ N A++L +M +
Sbjct: 341 NAVIRLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRM-D 399
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ-KW 241
+LC P+ H+YN+L+ M + + R D E+W+ ++ +Y ++IHGL K+ +
Sbjct: 400 KELCPPDRHSYNMLLKMLIGVGRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKKGRA 459
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
++AC YFV M+++G+ P + T E L
Sbjct: 460 EDACSYFVRMVDEGIPPYQATCEVL 484
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 117/267 (43%), Gaps = 13/267 (4%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
++ L + + + A R M G P + ++ LL + R + ERF
Sbjct: 164 LFPLLFRAYSRARLPEDAIRAFSSMAGFGFPPTIADFHSLLFALSRNGLVEYGERF---F 220
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
R + FD +++I++ ++ KP+ + + M E+G+ V Y ++
Sbjct: 221 RESSAQFDV--------SAKAYTILISGWAVVKKPENARSLFDEMVERGVELDVHVYNAL 272
Query: 126 VKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
+ LC G I A+E L M ++ G+ P+A TY F KD A+++ +M
Sbjct: 273 IDALCRGGDITSAQEQLSNMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHA 332
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
L PN+ TYN +I + L ++ I + + D+ SY L++ C+ ++ +A
Sbjct: 333 L-TPNVFTYNAVIRLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKA 391
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ M ++ P + ++ L + LI
Sbjct: 392 LRLISRMDKELCPPDRHSYNMLLKMLI 418
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y ++ C + A R L M + PNV TYN ++ +C
Sbjct: 299 VPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLLCDLGE------ 352
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A + DE+ +G +PDV S++ +L+ + + + +L ++ M ++ P
Sbjct: 353 ----INEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPDRH 408
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168
+Y ++K L GR + A E+ M + G P A TY +K
Sbjct: 409 SYNMLLKMLIGVGRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKK 456
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I C + I+ A L E+ +G +P+V +YN LLN C+
Sbjct: 335 PNVFTYNAVIRLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKL--------- 385
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A ++ M PD S++++L + + +++ + M+++G P AT
Sbjct: 386 -KEVNKALRLISRMDKELCPPDRHSYNMLLKMLIGVGRFDTAIEVWDGMEKRGFHPGAAT 444
Query: 122 YTSVVKCLCS-CGRIEDAEELLGEMVRNGVSPSAET 156
Y ++ L S GR EDA MV G+ P T
Sbjct: 445 YAVMIHGLASKKGRAEDACSYFVRMVDEGIPPYQAT 480
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 84/237 (35%), Gaps = 34/237 (14%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE---------- 136
F ++ YSRA P+ ++ + M G PT+A + S++ L G +E
Sbjct: 165 FPLLFRAYSRARLPEDAIRAFSSMAGFGFPPTIADFHSLLFALSRNGLVEYGERFFRESS 224
Query: 137 ------------------------DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
+A L EMV GV YN D
Sbjct: 225 AQFDVSAKAYTILISGWAVVKKPENARSLFDEMVERGVELDVHVYNALIDALCRGGDITS 284
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A + M++ VPN TY + A + + + + L ++ +Y +I
Sbjct: 285 AQEQLSNMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVI 344
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
LC+ + EA E+ +G P ++ TL + + RL ++D+E
Sbjct: 345 RLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKE 401
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 154/307 (50%), Gaps = 30/307 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-E 59
+P++ YT+LI G+CK + D A R +++ RG P+VVTY+ L++G+C+ L +
Sbjct: 147 IPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAID 206
Query: 60 RFEKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVY 94
F + I++ A + + M G PDV +++ +++ +
Sbjct: 207 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 266
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ + + D LN M KG+ P V T+TS++ LC R+ DA +LGEM R SP+
Sbjct: 267 CKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 326
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TYN Y AN + + M E+ C PN+ ++NI+I +NR E+
Sbjct: 327 YTYNTILDGY---CRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVE 383
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK-GLLPQKVTFETLYRGLIQS 273
+ D+ YT +I GLC ++K EAC+ + +M+E+ G LP +T+ TL GL +
Sbjct: 384 EARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNA 443
Query: 274 DMLRTWR 280
ML R
Sbjct: 444 GMLDRAR 450
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 11/275 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I+ C NR+ A +FL EM R + PNVVTY VL++G+C+
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGR------- 96
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + +MR + + P +++ ++ +A + + D L M G P + T
Sbjct: 97 ---VDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFT 152
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C + +DA + ++V G P TY+C A+ L+ +M
Sbjct: 153 YTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMI 212
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C+PN TYN LI F + +MD + + + D+ +YT L++G C+ +
Sbjct: 213 KSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARL 272
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+A +M KGL P VTF +L GL + + L
Sbjct: 273 DDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 45/254 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT+L+ G+CK+ R+D A L +M +G+ P+VVT+ L++G+CR
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR---------- 303
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP-TVA 120
E + +A + EMR + P V +++ +L Y RA++ + + FM E+ CP V
Sbjct: 304 ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLE---EARKFMLEEMDCPPNVV 360
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++ +++ LC R +A EL+ E R +P Y K + A ++YR+M
Sbjct: 361 SFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKM 420
Query: 181 KED-------------------------------DLCVPNIHTYNILIGMFMALNRMDMV 209
E+ CVPNI TYN+LI F NR +
Sbjct: 421 LEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDA 480
Query: 210 REIWNHVKGSELGL 223
RE+ + + G+
Sbjct: 481 RELLDDMVQRGFGV 494
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 8/205 (3%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
D +++ ++ + + + +L L M KG P V TYT+V+ LC R+ +A + L
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
EM ++P+ TY + A+ L +M++ CVP TYN LI
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK--CVPTAVTYNSLISGLCK 127
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
R ++ + S D+ +YT LI G C+ +K +A + F +++ +G P VT
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLD 287
+ L GL + RLK+ +D
Sbjct: 188 YSCLIDGLCKEG------RLKEAID 206
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
V + D +YT LI GLC+ ++ ++A + +M+ KG P T+ + L +
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 276 LRTWRRLKKKLDEESIT 292
L R+ +++ ++T
Sbjct: 62 LHEARKFLEEMANRNLT 78
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 154/307 (50%), Gaps = 30/307 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-E 59
+P++ YT+LI G+CK + D A R +++ RG P+VVTY+ L++G+C+ L +
Sbjct: 147 IPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAID 206
Query: 60 RFEKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVY 94
F + I++ A + + M G PDV +++ +++ +
Sbjct: 207 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 266
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ + + D LN M KG+ P V T+TS++ LC R+ DA +LGEM R SP+
Sbjct: 267 CKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 326
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TYN Y AN + + M E+ C PN+ ++NI+I +NR E+
Sbjct: 327 YTYNTILDGY---CRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVE 383
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK-GLLPQKVTFETLYRGLIQS 273
+ D+ YT +I GLC ++K EAC+ + +M+E+ G LP +T+ TL GL +
Sbjct: 384 EARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNA 443
Query: 274 DMLRTWR 280
ML R
Sbjct: 444 GMLDRAR 450
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 11/275 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I+ C NR+ A +FL EM R + PNVVTY VL++G+C+
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGR------- 96
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + +MR + + P +++ ++ +A + + D L M G P + T
Sbjct: 97 ---VDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFT 152
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C + +DA + ++V G P TY+C A+ L+ +M
Sbjct: 153 YTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMI 212
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C+PN TYN LI F + +MD + + + D+ +YT L++G C+ +
Sbjct: 213 KSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARL 272
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+A +M KGL P VTF +L GL + + L
Sbjct: 273 DDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 45/247 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT+L+ G+CK+ R+D A L +M +G+ P+VVT+ L++G+CR
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR---------- 303
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP-TVA 120
E + +A + EMR + P V +++ +L Y RA++ + + FM E+ CP V
Sbjct: 304 ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLE---EARKFMLEEMDCPPNVV 360
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++ +++ LC R +A EL+ E R +P Y K + A ++YR+M
Sbjct: 361 SFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKM 420
Query: 181 KED-------------------------------DLCVPNIHTYNILIGMFMALNRMDMV 209
E+ CVPNI TYN+LI F NR +
Sbjct: 421 LEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDA 480
Query: 210 REIWNHV 216
RE+ + +
Sbjct: 481 RELLDDM 487
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 8/205 (3%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
D +++ ++ + + + +L L M KG P V TYT+V+ LC R+ +A + L
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
EM ++P+ TY + A+ L +M++ CVP TYN LI
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK--CVPTAVTYNSLISGLCK 127
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
R ++ + S D+ +YT LI G C+ +K +A + F +++ +G P VT
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLD 287
+ L GL + RLK+ +D
Sbjct: 188 YSCLIDGLCKEG------RLKEAID 206
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 79/203 (38%), Gaps = 55/203 (27%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +TSL+ G C+ NR+ A LGEM + P V TYN +L+G CR L +F
Sbjct: 289 PDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF 348
Query: 62 E---------------------KTIRNAE--KVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
K R++E ++ +E R R PDV ++ V+ R
Sbjct: 349 MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREK 408
Query: 99 KPQLS--------------------------------LDKLNFMKEKGICPTVATYTSVV 126
K + LD+ EKG P + TY ++
Sbjct: 409 KVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLI 468
Query: 127 KCLCSCGRIEDAEELLGEMVRNG 149
R EDA ELL +MV+ G
Sbjct: 469 DAFRKANRDEDARELLDDMVQRG 491
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
V + D +YT LI GLC+ ++ ++A + +M+ KG P T+ + L +
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 276 LRTWRRLKKKLDEESIT 292
L R+ +++ ++T
Sbjct: 62 LHEARKFLEEMANRNLT 78
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 151/290 (52%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI+G N+ A + M++RG +PN+VTY V++NG+C+R
Sbjct: 112 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD------- 164
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + ++M IE DV F+ ++ + +L+ M+ KGI P V T
Sbjct: 165 ---IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 221
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLCS GR DA +LL +M+ ++P+ T+N + A KL+ M
Sbjct: 222 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 281
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TYN LI F +R+D ++++ + + DLD+Y LI G C+ ++
Sbjct: 282 KRSI-DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 340
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++ + F EM +GL+ VT+ TL +GL +++ K++ + +
Sbjct: 341 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 390
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 146/289 (50%), Gaps = 11/289 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI C R A + L +MIE+ + PN+VT+N L++ +
Sbjct: 217 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK---------- 266
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AEK+ D+M R I+PD+ +++ +++ + + + FM K P + T
Sbjct: 267 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 326
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+ED EL EM G+ TY + D + A K+++QM
Sbjct: 327 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 386
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + P+I TY+IL+ +++ E++++++ SE+ LD+ YT +I G+C+ K
Sbjct: 387 SDGV-PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 445
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ F + KG+ P VT+ T+ GL +L+ L KK+ E+
Sbjct: 446 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +LI G+CK R++ EM RG+ + VTY L+ G+ H +
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL-----FHDGD-- 374
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA+KVF +M G+ PD+ ++SI+L K + +L+ ++M++ I +
Sbjct: 375 ---CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 431
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++++ +C G+++D +L + GV P+ TYN ++ A L ++MK
Sbjct: 432 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 491
Query: 182 EDDLCVPNIHTYNILI 197
ED +P+ TYN LI
Sbjct: 492 EDG-PLPDSGTYNTLI 506
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 135/284 (47%), Gaps = 13/284 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDM--AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
+P++ + L+ K+ + D+ + LG+M++ G EP++VT + LLNG C
Sbjct: 39 LPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCH------- 91
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
K I +A + D+M G PD +F+ ++H +K ++ ++ M ++G P
Sbjct: 92 ---GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 148
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ TY VV LC G I+ A LL +M + +N + + A+ L++
Sbjct: 149 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 208
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M+ + PN+ TY+ LI + R ++ + + ++ +L ++ LI ++
Sbjct: 209 EMETKGI-RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 267
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
K+ EA + +MI++ + P T+ +L G D L +++
Sbjct: 268 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 311
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 10/176 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT+LI G D A++ +M+ GV P+++TY++LL+G+C N + EK +
Sbjct: 362 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN------NGKLEKAL- 414
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+VFD M+ I+ D+ ++ ++ +A K D + KG+ P V TY +++
Sbjct: 415 ---EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 471
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
LCS +++A LL +M +G P + TYN + + D + +L R+M+
Sbjct: 472 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 527
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 128/292 (43%), Gaps = 14/292 (4%)
Query: 14 WCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFD 73
W K ++D A G M++ P++ +N LL+ + + ++F+ I A +
Sbjct: 17 WGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKM------KKFDLVISLA--LLG 68
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
+M G EP + + S +L+ Y + ++ ++ M E G P T+T+++ L
Sbjct: 69 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 128
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
+ +A L+ MV+ G P+ TY R D + A L +M+ + ++ +
Sbjct: 129 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI-EADVVIF 187
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N +I +D ++ ++ + ++ +Y+ LI LC +W +A Q +MIE
Sbjct: 188 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 247
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNY 300
K + P VTF L ++ +L K+ +D + T+ S +
Sbjct: 248 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 299
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 151/290 (52%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI+G N+ A + M++RG +PN+VTY V++NG+C+R
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD------- 165
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + ++M IE DV F+ ++ + +L+ M+ KGI P V T
Sbjct: 166 ---IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 222
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLCS GR DA +LL +M+ ++P+ T+N + A KL+ M
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TYN LI F +R+D ++++ + + DLD+Y LI G C+ ++
Sbjct: 283 KRSI-DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++ + F EM +GL+ VT+ TL +GL +++ K++ + +
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 146/288 (50%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI C R A + L +MIE+ + PN+VT+N L++ +
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK---------- 267
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AEK+ D+M R I+PD+ +++ +++ + + + FM K P + T
Sbjct: 268 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+ED EL EM G+ TY + D + A K+++QM
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + P+I TY+IL+ +++ E++++++ SE+ LD+ YT +I G+C+ K
Sbjct: 388 SDGV-PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
+ F + KG+ P VT+ T+ GL +L+ L KK+ E+
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 494
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 135/280 (48%), Gaps = 11/280 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ Y LI +C+ ++I +A LG+M++ G EP++VT + LLNG C
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH----------G 93
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K I +A + D+M G PD +F+ ++H +K ++ ++ M ++G P + TY
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
VV LC G I+ A LL +M + +N + + A+ L+++M+
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ PN+ TY+ LI + R ++ + + ++ +L ++ LI ++ K+
Sbjct: 214 KGI-RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
EA + +MI++ + P T+ +L G D L +++
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +LI G+CK R++ EM RG+ + VTY L+ G+ H +
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL-----FHDGD-- 375
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA+KVF +M G+ PD+ ++SI+L K + +L+ ++M++ I +
Sbjct: 376 ---CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++++ +C G+++D +L + GV P+ TYN ++ A L ++MK
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 182 EDDLCVPNIHTYNILI 197
ED +P+ TYN LI
Sbjct: 493 EDG-PLPDSGTYNTLI 507
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 137/306 (44%), Gaps = 18/306 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNE 59
+P++ + L+ K+ + D+ LGE ++R G+ N+ TYN+L+N CRR+
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVIS-LGEKMQRLGISHNLYTYNILINCFCRRSQ----- 60
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
I A + +M G EP + + S +L+ Y + ++ ++ M E G P
Sbjct: 61 -----ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 115
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+T+++ L + +A L+ MV+ G P+ TY R D + A L +
Sbjct: 116 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 175
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ + ++ +N +I +D ++ ++ + ++ +Y+ LI LC
Sbjct: 176 MEAAKI-EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFG 294
+W +A Q +MIEK + P VTF L ++ +L K+ +D + T+
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294
Query: 295 SEFQNY 300
S +
Sbjct: 295 SLINGF 300
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 129/271 (47%), Gaps = 16/271 (5%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M++ P++ +N LL+ + + ++F+ I EK M+ GI ++ +++I
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKM------KKFDLVISLGEK----MQRLGISHNLYTYNI 50
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+++ + R + L+L L M + G P++ T +S++ C RI DA L+ +MV G
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P T+ A+ A+ L +M + C PN+ TY +++ +D+
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ N ++ +++ D+ + +I LC+ + +A F EM KG+ P VT+ +L
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 270 LIQ----SDMLRTWRRL-KKKLDEESITFGS 295
L SD + + +KK++ +TF +
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 10/176 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT+LI G D A++ +M+ GV P+++TY++LL+G+C N + EK
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN------NGKLEK--- 413
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +VFD M+ I+ D+ ++ ++ +A K D + KG+ P V TY +++
Sbjct: 414 -ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
LCS +++A LL +M +G P + TYN + + D + +L R+M+
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 147/288 (51%), Gaps = 12/288 (4%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
K Y+ L+ GW I A + EM E+ +V+ YN LL C+
Sbjct: 213 AKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGK--------- 263
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+ A K+F EM GI+PD +FSI + Y A+ L+ L+ MK + P V TY
Sbjct: 264 -VSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYN 322
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++K LC ++E+A +LL E++ P A +YN + + N A +L +M +D
Sbjct: 323 CMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKD 382
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ-KWK 242
+ C+P+ H+YN+L+ + + + R D E+W + + +Y++++HGLC+K+ K +
Sbjct: 383 N-CLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLE 441
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
EAC+YF MI++G+ P T E L LI +L L K++ +
Sbjct: 442 EACKYFEMMIDEGIPPYSSTVEILRNRLIGLGLLDYIEILAGKMEHST 489
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +I CK +++ A + L E+IER +P+ +YN +L C +
Sbjct: 315 VPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSE------ 368
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +A ++ M PD S++++L + R + +++ M EKG P+V+
Sbjct: 369 ----VNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFYPSVS 424
Query: 121 TYTSVVKCLC-SCGRIEDAEELLGEMVRNGVSPSAET 156
TY+ +V LC G++E+A + M+ G+ P + T
Sbjct: 425 TYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSST 461
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ ++ I +C+ N I +A R L EM + PNV TYN ++ +C++
Sbjct: 281 PDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKK--------- 331
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A ++ +E+ R +PD S++ +L + + + ++ M + P +
Sbjct: 332 -EKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHS 390
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++K L GR + A E+ M G PS TY+ +K Y +M
Sbjct: 391 YNMLLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMM 450
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMV 209
D+ P T IL + L +D +
Sbjct: 451 IDEGIPPYSSTVEILRNRLIGLGLLDYI 478
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 97/211 (45%), Gaps = 4/211 (1%)
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
I P V F +V YSRA+ P ++ + M E G+ PT+ ++ LC + A+
Sbjct: 142 ISPQV--FWLVFRAYSRANLPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQ 199
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
++ + V++ A+TY+ + + ++ A K++ +M+E C ++ YN L+
Sbjct: 200 QIF-DRVKHQFQTRAKTYSILVRGWGDIGESVSACKVFDEMREQQ-CAVDVLAYNSLLEA 257
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
F ++ +++ + + + D ++++ I CE A + EM L+P
Sbjct: 258 FCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPN 317
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
T+ + + L + + + +L ++ E S
Sbjct: 318 VFTYNCMIKKLCKKEKVEEAYQLLNEIIERS 348
>gi|125526118|gb|EAY74232.1| hypothetical protein OsI_02112 [Oryza sativa Indica Group]
Length = 556
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 148/281 (52%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + Y L++GW + R+D + EM GV P VVTY L+ G+C + R
Sbjct: 181 PDERAYNILLHGWSRAGRLDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVK------RRP 234
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ I + DEMR GIE ++ + + +++ ++A + Q + L G+ P ++T
Sbjct: 235 DQAI----ALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNIST 290
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S+V C G + A +L M G+SP+ TYN FF + D M Y +M
Sbjct: 291 FNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMI 350
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ TY +L+ M NR+++V ++ ++ DL + TMLIH LC + ++
Sbjct: 351 GNGYS-PDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQF 409
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+EAC F +M ++G++PQ +T++ L R L + ++R ++L
Sbjct: 410 EEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVRLIQKL 450
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 25/169 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + SL+ G+CK + A L M ERG+ P TYN + + + F
Sbjct: 286 PNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNF 345
Query: 62 -EKTIRNA------------------------EKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
K I N ++ EMR G EPD+ + ++++H+ R
Sbjct: 346 YSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCR 405
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
H+ + + + M ++GI P TY +++ L G + ++L M
Sbjct: 406 RHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVRLIQKLTNLM 454
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 15/233 (6%)
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-------GICPTVATYTSV-VKCLCSCG 133
P + +F+ ++ Y+R + +L F++ G P A+ ++ V LC G
Sbjct: 101 PPLAAFAPLVRRYARLGRAPAALRAFQFLRRHPDRYMAGGDIPAAASLLNMAVDALCKEG 160
Query: 134 RIEDAEELLGEMVRN--GVSPSAETYNCFFKEYR--GRKDANGAMKLYRQMKEDDLCVPN 189
A EL R P YN + GR D G KL+ +M+ + P
Sbjct: 161 HPRAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVG--KLWAEMRLAGV-RPT 217
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+ TY LI R D + + ++ + +L + +++ L + ++++A +
Sbjct: 218 VVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLE 277
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
+ G+ P TF +L G + L + K + E I+ + NY F
Sbjct: 278 KFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFF 330
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 145/277 (52%), Gaps = 13/277 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ +TSL+YGWC+ +I A+ L ++ E G EP++V YN LL G + +
Sbjct: 244 PNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKM------ 297
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R+A + EM+ P+ SF+I++ + + K ++ M+ G V T
Sbjct: 298 ----RDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVT 353
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G + A E+L +M++ G PS +Y C + +++ M+L +M+
Sbjct: 354 YTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMR 413
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ CVP+++ YN +I + L + +W ++ L LD+Y +++HG +
Sbjct: 414 KIG-CVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCL 472
Query: 242 KEACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
EAC YF EM+E+GLL PQ T + L L++++ L
Sbjct: 473 VEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKL 509
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 132/270 (48%), Gaps = 11/270 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +T LI +CK ++D A R EM G E +VVTY L++G C+ +
Sbjct: 314 PNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGN------- 366
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ D+M +G +P S+ ++ + + + + ++ + M++ G P +
Sbjct: 367 ---TDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNI 423
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ +C G +++A L GEM G++P +TY + + A +++M
Sbjct: 424 YNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMV 483
Query: 182 EDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E L P T L + +++M + +W+ + L++ ++T+ IH L
Sbjct: 484 ERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGH 543
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
KEAC Y ++M++ L+PQ TF L RGL
Sbjct: 544 VKEACSYCLDMMDADLMPQPDTFAKLMRGL 573
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 15/170 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ +Y ++I CK+ + A R GEM G+ P + TY ++++G + L
Sbjct: 418 VPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCL----- 472
Query: 61 FEKTIRNAEKVFDEMRVRGI--EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
A F EM RG+ P + + + RA K +++ + + M KG
Sbjct: 473 -----VEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELN 527
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168
V+ +T + L S G +++A +M+ + P +T F K RG K
Sbjct: 528 VSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDT---FAKLMRGLK 574
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 145/277 (52%), Gaps = 13/277 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ +TSL+YGWC+ +I A+ L ++ E G EP++V YN LL G + +
Sbjct: 267 PNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKM------ 320
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R+A + EM+ P+ SF+I++ + + K ++ M+ G V T
Sbjct: 321 ----RDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVT 376
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G + A E+L +M++ G PS +Y C + +++ M+L +M+
Sbjct: 377 YTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMR 436
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ CVP+++ YN +I + L + +W ++ L LD+Y +++HG +
Sbjct: 437 KIG-CVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCL 495
Query: 242 KEACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
EAC YF EM+E+GLL PQ T + L L++++ L
Sbjct: 496 VEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKL 532
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 132/270 (48%), Gaps = 11/270 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +T LI +CK ++D A R EM G E +VVTY L++G C+ +
Sbjct: 337 PNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGN------- 389
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ D+M +G +P S+ ++ + + + + ++ + M++ G P +
Sbjct: 390 ---TDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNI 446
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ +C G +++A L GEM G++P +TY + + A +++M
Sbjct: 447 YNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMV 506
Query: 182 EDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E L P T L + +++M + +W+ + L++ ++T+ IH L
Sbjct: 507 ERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGH 566
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
KEAC Y ++M++ L+PQ TF L RGL
Sbjct: 567 VKEACSYCLDMMDADLMPQPDTFAKLMRGL 596
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 15/170 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ +Y ++I CK+ + A R GEM G+ P + TY ++++G + L
Sbjct: 441 VPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCL----- 495
Query: 61 FEKTIRNAEKVFDEMRVRGI--EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
A F EM RG+ P + + + RA K +++ + + M KG
Sbjct: 496 -----VEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELN 550
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168
V+ +T + L S G +++A +M+ + P +T F K RG K
Sbjct: 551 VSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDT---FAKLMRGLK 597
>gi|222641466|gb|EEE69598.1| hypothetical protein OsJ_29150 [Oryza sativa Japonica Group]
Length = 579
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 140/265 (52%), Gaps = 11/265 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ K YT LI GW + + + A EM++RGVE +V YN L++ +CR + +
Sbjct: 223 SAKAYTILISGWAVVKKPENARSLFDEMVKRGVELDVHVYNALIDALCRGGDITSAQ--- 279
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
E++ + + G+ P+ ++ LH + + +L L+ M + P V TY
Sbjct: 280 ------EQLSNMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTY 333
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+V++ LC G I +A +L E+ G P +YN + K+ N A++L +M +
Sbjct: 334 NAVIRLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRM-D 392
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ-KW 241
+LC P+ H+YN+L+ M +++ R D E+W+ ++ +Y ++IHGL K+ +
Sbjct: 393 KELCPPDRHSYNMLLKMLISVGRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKKGRA 452
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
++AC YFV M+++G+ P + T E L
Sbjct: 453 EDACSYFVRMVDEGIPPYQATCEVL 477
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 123/285 (43%), Gaps = 17/285 (5%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
++ L + + + A R M G P + ++ LL + R + ERF
Sbjct: 157 LFPLLFRAYSRARLPEDAIRAFSSMAGFGFPPTIADFHSLLFALSRNGLVEYGERF---F 213
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
R + FD +++I++ ++ KP+ + + M ++G+ V Y ++
Sbjct: 214 RESTAQFDV--------SAKAYTILISGWAVVKKPENARSLFDEMVKRGVELDVHVYNAL 265
Query: 126 VKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
+ LC G I A+E L M ++ G+ P+A TY F KD A+++ +M
Sbjct: 266 IDALCRGGDITSAQEQLSNMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHA 325
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
L PN+ TYN +I + L ++ I + + D+ SY L++ C+ ++ +A
Sbjct: 326 L-TPNVFTYNAVIRLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKA 384
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK 285
+ M ++ P + ++ L + LI + W ++K+
Sbjct: 385 LRLISRMDKELCPPDRHSYNMLLKMLISVGRFDTAIEVWDGMEKR 429
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y ++ C + A R L M + PNV TYN ++ +C
Sbjct: 292 VPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLLCDLGE------ 345
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A + DE+ +G +PDV S++ +L+ + + + +L ++ M ++ P
Sbjct: 346 ----INEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPDRH 401
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168
+Y ++K L S GR + A E+ M + G P A TY +K
Sbjct: 402 SYNMLLKMLISVGRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKK 449
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I C + I+ A L E+ +G +P+V +YN LLN C+
Sbjct: 328 PNVFTYNAVIRLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKL--------- 378
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A ++ M PD S++++L + + +++ + M+++G P AT
Sbjct: 379 -KEVNKALRLISRMDKELCPPDRHSYNMLLKMLISVGRFDTAIEVWDGMEKRGFHPGAAT 437
Query: 122 YTSVVKCLCS-CGRIEDAEELLGEMVRNGVSPSAET 156
Y ++ L S GR EDA MV G+ P T
Sbjct: 438 YAVMIHGLASKKGRAEDACSYFVRMVDEGIPPYQAT 473
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 85/237 (35%), Gaps = 34/237 (14%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE---------- 136
F ++ YSRA P+ ++ + M G PT+A + S++ L G +E
Sbjct: 158 FPLLFRAYSRARLPEDAIRAFSSMAGFGFPPTIADFHSLLFALSRNGLVEYGERFFREST 217
Query: 137 ------------------------DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
+A L EMV+ GV YN D
Sbjct: 218 AQFDVSAKAYTILISGWAVVKKPENARSLFDEMVKRGVELDVHVYNALIDALCRGGDITS 277
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A + M++ VPN TY + A + + + + L ++ +Y +I
Sbjct: 278 AQEQLSNMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVI 337
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
LC+ + EA E+ +G P ++ TL + + RL ++D+E
Sbjct: 338 RLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKE 394
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 139/262 (53%), Gaps = 14/262 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ + L+ GW + + AE F EM E G++P+VV+YN L++ C+
Sbjct: 208 PNLQTFNILLSGW---KQSEEAELFFEEMRELGIKPDVVSYNSLIDVYCK---------- 254
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A KV ++MR I PDV +++ ++ +P + D LN MKE G P VA
Sbjct: 255 DREMEKAYKVVEKMREEDISPDVITYTSIIGGLGLVGQPDKARDILNEMKEYGCYPDVAA 314
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V++ C R+ DA L+ EM G+SP+A TYN FF+ + D + LYR+M
Sbjct: 315 YNAVIRNYCIAKRLGDASNLMDEMASKGLSPNATTYNLFFRVFYWSNDLRNSWSLYRRMM 374
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C+PN + LI +F +++M +WN + G + +L LC+ K
Sbjct: 375 ESG-CLPNTQSCMFLIRLFRKHEKVEMALTLWNDMVEKGFGSYILVSDVLFDLLCDMGKL 433
Query: 242 KEACQYFVEMIEKGLLPQKVTF 263
EA + F++MIEKG P V+F
Sbjct: 434 VEAEKCFLQMIEKGHKPSNVSF 455
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
+K P + T+ + L + E+AE EM G+ P +YN Y ++
Sbjct: 203 KKEFKPNLQTFNIL---LSGWKQSEEAELFFEEMRELGIKPDVVSYNSLIDVYCKDREME 259
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A K+ +M+E+D+ P++ TY +IG + + D R+I N +K D+ +Y +
Sbjct: 260 KAYKVVEKMREEDIS-PDVITYTSIIGGLGLVGQPDKARDILNEMKEYGCYPDVAAYNAV 318
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
I C ++ +A EM KGL P T+ +R S+ LR L +++ E
Sbjct: 319 IRNYCIAKRLGDASNLMDEMASKGLSPNATTYNLFFRVFYWSNDLRNSWSLYRRMME 375
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 152/291 (52%), Gaps = 12/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT+L+ GWC+ I AE+ +M G+EPNV TY+++++ +CR
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQ------- 305
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A VF +M G P+ +F+ ++ V+ +A +P+ L N MK+ G P T
Sbjct: 306 ---ISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTIT 362
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +E+A ++L M++ +A T+N F+ ++D NGA ++Y +M
Sbjct: 363 YNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMM 422
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C PN TYNIL+ MF DMV ++ + E+ ++++Y +L+ C W
Sbjct: 423 EAK-CEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHW 481
Query: 242 KEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + F EM+ EK L P +E + L ++ L+ L +K+ ++ +
Sbjct: 482 NNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 135/289 (46%), Gaps = 12/289 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+++ +T LI + + A M + G P+ + ++++++ + R+
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRK---------- 234
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A+ FD ++ R EPDV ++ ++ + RA + + MK GI P V TY
Sbjct: 235 RRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTY 293
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ V+ LC CG+I A ++ +M+ +G +P+A T+N + + +++Y QMK+
Sbjct: 294 SIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKK 353
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P+ TYN LI ++ ++ N + + ++ ++ + + +K+
Sbjct: 354 LG-CEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVN 412
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + + +M+E P VT+ L R S ++KK +D++ +
Sbjct: 413 GAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEV 461
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 147/271 (54%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +L+ +C+ +D AER +G M E GV P++VT+N ++NG+C+ +
Sbjct: 188 PNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRM------ 241
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+FDEM G+ PD S++ ++ Y +A +L M +KG+ P V T
Sbjct: 242 ----EDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVT 297
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+TS++ +C G +E A L+G+M G+ + T+ + + A+ ++M+
Sbjct: 298 FTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMR 357
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + P++ YN+LI + L RMD RE+ + ++ + D+ +Y+ ++ G C+
Sbjct: 358 ECRI-QPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
A + +M++KG++P +T+ +L RGL +
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCE 447
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 140/304 (46%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +++ + + A R L M+ GV PNV TYN+L+ +C R +R
Sbjct: 118 PSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARG-----QRE 171
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E V D+MR G P+V +++ ++ + RA + + + M+E G+ P++ T
Sbjct: 172 EAL----GVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVT 227
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +VV LC GR+EDA ++ EM R G++P +YN Y + A+ ++ +M
Sbjct: 228 FNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMA 287
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + VP++ T+ LI ++ + ++ L ++ ++T LI G C
Sbjct: 288 QKGV-VPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFL 346
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSE 296
+A EM E + P V + L G + + R L K + + +T+ +
Sbjct: 347 DDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTI 406
Query: 297 FQNY 300
Y
Sbjct: 407 LSGY 410
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 131/286 (45%), Gaps = 46/286 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +TSLI+ C+ ++ A +G+M ERG+ N T+ L++G CR L
Sbjct: 292 VPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLD---- 347
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A EMR I+P V ++++++ Y + + + + ++ M+ KG+ P V
Sbjct: 348 ------DALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVV 401
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY++++ C G + A EL +M++ GV P A TY+ + + A +L+ +M
Sbjct: 402 TYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKM 461
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L P+ TY LI G C++
Sbjct: 462 LQLGL-QPDEFTYTTLI-----------------------------------DGHCKEGN 485
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
++A EMI+KG+LP VT+ L GL +S + +RL KL
Sbjct: 486 VQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKL 531
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 136/319 (42%), Gaps = 61/319 (19%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+T+LI G+C+ +D A + EM E ++P+VV YNVL+NG C+ +
Sbjct: 333 FTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMD---------- 382
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++ EM +G++PDV ++S +L Y + + + M +KG+ P TY+S++
Sbjct: 383 EARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLI 442
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ LC R+ DA EL +M++ G+ P TY + + A+ L+ +M + +
Sbjct: 443 RGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGV- 501
Query: 187 VPNIHTYNI--------------------------------------------------L 196
+P++ TY++ L
Sbjct: 502 LPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVAL 561
Query: 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
+ F M+ +++ + LD Y++LIHG C +A + +++ G
Sbjct: 562 LKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGF 621
Query: 257 LPQKVTFETLYRGLIQSDM 275
P + +L RGL + M
Sbjct: 622 SPNSTSTISLVRGLFEEGM 640
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGA 173
G P++ Y +V+ L S + A LL M+R+GV+P+ TYN + R A
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
+ + C PN+ TYN L+ F +D + ++ + L ++ +++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
GLC+ + ++A + F EM +GL P V++ TL G ++ L
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCL 276
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 97/247 (39%), Gaps = 46/247 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+LI G CK + A EMI++GV P+VVTY+VL++G+ + A +R
Sbjct: 468 PDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRL 527
Query: 62 ----------------------------------------EKTIRNAEKVFDEMRVRGIE 81
+ + A+KV+ M R +
Sbjct: 528 LFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWK 587
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
D + +S+++H + R +L + G P + S+V+ L G +A+ +
Sbjct: 588 LDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNV 647
Query: 142 LGEMVRNGVSPSAETYNCFF----KEYRGRKDANGAMKLYRQ--MKEDDLCVPNIHTYNI 195
+ E++ AET KE G A G + + + E C+ +I +
Sbjct: 648 IQELLNCCSLADAETSKALIDLNRKEGVGYFQAQGELCMQKPALFVEHWNCMMSIVLFGA 707
Query: 196 LIGMFMA 202
IG +A
Sbjct: 708 FIGSCLA 714
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 145/291 (49%), Gaps = 13/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I G CK MA + L +M E+G +PN+V Y +++ +C+
Sbjct: 195 PDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCK---------- 244
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-SRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + +A + EM RGI PDV ++S +LH + S H + ++ N M + + P
Sbjct: 245 DTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATI-LFNEMVGRNVMPNTV 303
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T +V LC G + +A + M + G P+A TYN Y + A K+ M
Sbjct: 304 TFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIM 363
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D C P +H+YNILI + R+D + + + EL D +Y+ L+ GLC+ +
Sbjct: 364 V-DKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGR 422
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+EA F EM GLLP +T+ TL GL + L +L K + E I
Sbjct: 423 PQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI 473
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 144/304 (47%), Gaps = 44/304 (14%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV LI C++N + A LG+M + G++P+ +T+N L+NG C E
Sbjct: 126 NVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRC----------IE 175
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I+ A +F+EM RG +PDV S+S V++ ++ ++L L M+EKG P + Y
Sbjct: 176 GEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAY 235
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ LC + DA +LL EMV G+ P TY+ + N A L+ +M
Sbjct: 236 TTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVG 295
Query: 183 --------------DDLCV--------------------PNIHTYNILIGMFMALNRMDM 208
D LC PN +TYN L+ + N+MD
Sbjct: 296 RNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDE 355
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+++ + + + SY +LI+G C++++ EA VEM EK L P VT+ TL +
Sbjct: 356 AQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQ 415
Query: 269 GLIQ 272
GL Q
Sbjct: 416 GLCQ 419
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 151/299 (50%), Gaps = 18/299 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN +T L+ G CK + A M ++G EPN TYN L++G C
Sbjct: 299 MPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYC---------- 348
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A+KV D M +G P V S++I+++ Y + + + L M EK + P
Sbjct: 349 LNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTV 408
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+++++ LC GR ++A L EM +G+ P TY+ + A+KL + M
Sbjct: 409 TYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSM 468
Query: 181 KEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+E + P+I YNILI GMF+A ++++ +E+++ + + + +YT++I GL ++
Sbjct: 469 QESKI-EPDIVLYNILIEGMFIA-GKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEG 526
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITF 293
EA + F +M + G LP ++ + +G +Q+ T RL K+ +S TF
Sbjct: 527 LSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTF 585
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 127/265 (47%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +L+ G+C N++D A++ L M+++G P V +YN+L+NG C+R
Sbjct: 335 PNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKR--------- 385
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A+ + EM + + PD ++S ++ + +PQ +L+ M G+ P + T
Sbjct: 386 -RRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMT 444
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ LC G +++A +LL M + + P YN + A +L+ ++
Sbjct: 445 YSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLF 504
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + P I TY I+I + D E++ ++ + SY ++I G + Q
Sbjct: 505 ADGI-QPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDS 563
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
A + EM+ K TF+ L
Sbjct: 564 STAIRLIDEMVGKRFSADSSTFQML 588
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 11/231 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y LI G+CK R+D A+ L EM E+ + P+ VTY+ L+ G+C+ P E
Sbjct: 370 PVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVG--RPQE-- 425
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F EM G+ PD+ ++S +L + +L L M+E I P +
Sbjct: 426 ------ALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVL 479
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ + G++E A+EL ++ +G+ P+ TY K ++ A +L+R+M
Sbjct: 480 YNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKM- 538
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
EDD +PN +YN++I F+ + + + G D ++ ML+
Sbjct: 539 EDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 19/265 (7%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
ID A M+ P+VV + L + ++ K + ++M + G
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKK----------KQYSTVVSLCNQMDLFG 122
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
+ +V S +I+++ R + ++ L M + GI P T+ +++ C G I++A
Sbjct: 123 VTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAV 182
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
L EMVR G P +Y+ + + A++L R+M+E C PN+ Y +I
Sbjct: 183 GLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKG-CKPNLVAYTTIIDS 241
Query: 200 F----MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
+ + MD++ E+ + + D+ +Y+ ++HG C EA F EM+ +
Sbjct: 242 LCKDTLVNDAMDLLSEMVDR----GIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRN 297
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWR 280
++P VTF L GL + M+ R
Sbjct: 298 VMPNTVTFTILVDGLCKEGMVSEAR 322
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 140/282 (49%), Gaps = 11/282 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +L++GWCK + A + EM G P+V TY L+ C
Sbjct: 299 PDESSFNTLVHGWCKARMLKEARETMKEMERHGFSPSVTTYTCLIEAYC----------M 348
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + + + DEM +G P++ +++IV+H +A + Q +LD + +K+ G +
Sbjct: 349 EKDFQTVDGILDEMHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASF 408
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC GR++DA ++ EM R G+SP+ T+N A A+KL QM+
Sbjct: 409 YNCLIYILCRAGRLQDANFVVEEMHRTGISPNLTTFNTLISAACDHSLAENALKLLVQME 468
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P+I TY L+ + + + + H+ ++ D +YT+L+ LC +
Sbjct: 469 EQS-CNPDIKTYTPLLKLCCRRKWVKTLLFLICHMFRKDITPDFSTYTLLVCWLCRNGRL 527
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
++C + EM+ KG PQ+ TF+ + L ML R+++
Sbjct: 528 TQSCLFLEEMVLKGFTPQQATFDLVLEKLKNMHMLSAVRKIQ 569
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 114/275 (41%), Gaps = 12/275 (4%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75
K + D+ +G+M E G ++ T ++ +C R+ I F +M
Sbjct: 209 KFKQFDLMCGLIGQMHEIGGLVSLATMTKVMRRLC------GANRWSDAI----DAFHKM 258
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
G+ D + +++L + + + +K I P +++ ++V C +
Sbjct: 259 DRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQALKGT-IPPDESSFNTLVHGWCKARML 317
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
++A E + EM R+G SPS TY C + Y KD + +M C PNI TY I
Sbjct: 318 KEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKG-CTPNIITYTI 376
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
++ R + ++ VK LD Y LI+ LC + ++A EM G
Sbjct: 377 VMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRTG 436
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ P TF TL + +L +++E+S
Sbjct: 437 ISPNLTTFNTLISAACDHSLAENALKLLVQMEEQS 471
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 8/217 (3%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
S+ +++ + + + L + M E G ++AT T V++ LC R DA + +M
Sbjct: 199 SYDMMVDILGKFKQFDLMCGLIGQMHEIGGLVSLATMTKVMRRLCGANRWSDAIDAFHKM 258
Query: 146 VRNGVSPSAETYNCFFKEY---RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
R GV+ + N R K A GA + + P+ ++N L+ +
Sbjct: 259 DRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQALKGTIP-----PDESSFNTLVHGWCK 313
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
+ RE ++ + +YT LI C ++ ++ EM KG P +T
Sbjct: 314 ARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNIIT 373
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ + L ++ + K+ ++ + F N
Sbjct: 374 YTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYN 410
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 158/316 (50%), Gaps = 26/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+S+I+G C R + A+ EM++ GV PNVVT+NVL++ +C+ +
Sbjct: 271 PDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHL 330
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E I +A +F M +GIE D S++++++ Y +
Sbjct: 331 LKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCK 390
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + M K I PTV TY +++ L G++ DA L GEM + ++P + T
Sbjct: 391 SGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCT 450
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + AM+L+ ++ D P+I +N LI ++++ RE++N +
Sbjct: 451 YNILLDGLCKNNHLSEAMELFHYLENHDF-QPSIQIFNCLIDGLCKARKIEIARELFNRL 509
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
L ++ +YT++IHGLC+ + + A F+ M EKG P VTF TL RG Q+D +
Sbjct: 510 SHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEM 569
Query: 277 RTWRRLKKKLDEESIT 292
+ L +++ E+ +
Sbjct: 570 QKVVELLQEMAEKDFS 585
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 152/334 (45%), Gaps = 43/334 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------- 54
PN +TSL+ G C +RI A L +M+ G PNVVTY LLNG+C +
Sbjct: 160 PNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKL 219
Query: 55 ----LHPNERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIV 90
L+ N F TI+ +++F EM+ RGI PDV ++S +
Sbjct: 220 HEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSI 279
Query: 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+H + + + N M ++G+ P V T+ ++ LC G++E+A LL M++ G
Sbjct: 280 IHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGE 339
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
SP TYN + + A L+ M+ + + +YN+LI + RM +
Sbjct: 340 SPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAV-SYNVLINGYCKSGRMVEAK 398
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+++ + E+ + +Y L+ GL + K ++A F EM L P+ T+ L GL
Sbjct: 399 KLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGL 458
Query: 271 IQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
+++ L E++ +N+ F+P
Sbjct: 459 CKNNHL-----------SEAMELFHYLENHDFQP 481
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 144/314 (45%), Gaps = 41/314 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+ LI +C +N++D LGEM+ RG PN VT+ L+ G+C
Sbjct: 125 PDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGL 184
Query: 52 -----RASLHPNERFEKTIRN----------AEKVFDEMRVRG-------IEPDVTSFSI 89
R PN T+ N A K+ +EM + G I+P++ +
Sbjct: 185 LRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEM-LNGNGGFGVTIKPNLVCYCT 243
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ + + MK +GI P V Y+S++ +C GR E A+ L EMV G
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 150 VSPSAETYNCFFKEY--RGR-KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
V P+ T+N G+ ++AN +KL Q E P+ TYN LI F R+
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGES----PDTFTYNTLIDGFCLEGRI 359
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D R+++ ++ + D SY +LI+G C+ + EA + + EM+ K ++P +T+ TL
Sbjct: 360 DDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTL 419
Query: 267 YRGLIQSDMLR-TW 279
GL + +R W
Sbjct: 420 LTGLFREGKVRDAW 433
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 17/290 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERF--LGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE 59
P+ + + CK I +E F +I+ P + ++N LL V + +
Sbjct: 53 PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKI------K 106
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
R+ I ++ M + G+ PD + +I+++ Y +K L L M +G P
Sbjct: 107 RYFDVI----SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNT 162
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+TS+VK LC RI +A LL +MVR G P+ TY + A+KL+ +
Sbjct: 163 VTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEE 222
Query: 180 MKEDD-----LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
M + PN+ Y +I +D +E++ +KG + D+ +Y+ +IHG
Sbjct: 223 MLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHG 282
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
+C +W+ A F EM+++G+ P VTF L L ++ + L K
Sbjct: 283 MCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLK 332
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 25/181 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP--- 57
MP V Y +L+ G + ++ A GEM + P TYN+LL+G+C+ L
Sbjct: 410 MPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAME 469
Query: 58 ------NERFEKTIRN----------------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
N F+ +I+ A ++F+ + G+EP+V ++++++H
Sbjct: 470 LFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLC 529
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
++ + + + D M+EKG P + T+ ++++ C ++ ELL EM SP A
Sbjct: 530 KSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAS 589
Query: 156 T 156
T
Sbjct: 590 T 590
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 149/311 (47%), Gaps = 31/311 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
PNV Y +LI G CK+ R+ A L +MI++G P+++ YN+L+NG+C
Sbjct: 294 PNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIAL 353
Query: 51 -RRA---SLHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
RRA + P+ ++ A ++ ++ RG PDV +S ++ +
Sbjct: 354 LRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCK 413
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A K + D M G V TY++++ LC GR+++A LL MVR G PS T
Sbjct: 414 AGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMT 473
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN K + A++L +M+ + C P+ TYNILI + R+D +
Sbjct: 474 YNSLIKGLCDLNHLDEAIELVEEMERSN-CAPSAVTYNILIHGMCRMERVDSAVVLLEQA 532
Query: 217 K-----GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
K LD +Y+ LI GLC+ + EA YF EMI+ G++P +T+ L GL
Sbjct: 533 KARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLK 592
Query: 272 QSDMLRTWRRL 282
+S L R L
Sbjct: 593 KSKDLHELRHL 603
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 146/305 (47%), Gaps = 21/305 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +L+ G+C+ ID A+R EM + + PNV ++L++G+C+
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCK---------- 56
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K +A + F M+ GI D ++ +L + + +L L+ M++ G P V T
Sbjct: 57 AKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVT 116
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC + A+EL M SPS TYN AM L+++M
Sbjct: 117 YNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEML 176
Query: 182 E------DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
+ DD C PN+ TY++LI NR+ E+ +K D+ +YT+L+ GL
Sbjct: 177 DRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGL 236
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLK-KKLDEES 290
C++ K A + EM++ G +P VT+ +L GL + SD L R + +
Sbjct: 237 CKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNV 296
Query: 291 ITFGS 295
+T+G+
Sbjct: 297 VTYGT 301
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 131/272 (48%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+ LI G CK NR+ A L M RG P+V+TY +L++G+C+
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCK---------- 238
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A +V EM G P++ +++ +LH RA + +L + M +G P V T
Sbjct: 239 ESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVT 298
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GR++DA +L +M+ G +P YN + ++ L R+
Sbjct: 299 YGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAV 358
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P++ TY+ +I NR+D + +VK D+ Y+ LI GLC+ K
Sbjct: 359 SGGI-KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKV 417
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA + M G VT+ TL GL ++
Sbjct: 418 DEAFDLYEVMAGDGCDADVVTYSTLIDGLCKA 449
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 18/281 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ + +YT+L+ G K R+D A L EM + G EPNVVTYN L++G+C+ P+
Sbjct: 76 VADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNN--EPDR- 132
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLS-------LDKLNFMKEK 113
A+++F+ M+ P + +++ +L R K + + LD+ + +
Sbjct: 133 -------AQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGA 173
P V TY+ ++ LC R+ A ELL M G SP TY A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245
Query: 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
++ R+M D CVPN+ TYN L+ R+ + + ++ +Y LI
Sbjct: 246 WEVLREML-DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
GLC+ + K+AC +MI+KG P + + L GL ++D
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 345
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
+C P+++TY L+ F +D + ++ ++ L ++ ++LI GLC+ ++ +A
Sbjct: 4 ICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
+ F M G++ V + L GL W+ +K+LD +++ E +++ +P
Sbjct: 64 LRCFRAMQGSGIVADTVIYTALLSGL--------WK--EKRLD-QALAILHEMRDHGCEP 112
>gi|115436834|ref|NP_001043148.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|56201661|dbj|BAD73125.1| leaf protein -like [Oryza sativa Japonica Group]
gi|113532679|dbj|BAF05062.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|215717162|dbj|BAG95525.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 541
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 141/269 (52%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + Y L++GW + R+D + EM GV P VVTY L+ G+C + R
Sbjct: 181 PDERAYNILLHGWSRAGRLDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVK------RRP 234
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ I + DEMR GIE ++ + + +++ ++A + Q + L G+ P ++T
Sbjct: 235 DQAI----ALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNIST 290
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S+V C G + A +L M G+SP+ TYN FF + D M Y +M
Sbjct: 291 FNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMI 350
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ TY +L+ M NR+++V ++ ++ DL + TMLIH LC + ++
Sbjct: 351 GNGYS-PDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQF 409
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+EAC F +M ++G++PQ +T++ L R L
Sbjct: 410 EEACAEFEDMFKRGIVPQYITYQKLMREL 438
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 25/169 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + SL+ G+CK + A L M ERG+ P TYN + + + F
Sbjct: 286 PNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNF 345
Query: 62 -EKTIRNA------------------------EKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
K I N ++ EMR G EPD+ + ++++H+ R
Sbjct: 346 YSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCR 405
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
H+ + + + M ++GI P TY +++ L G + ++L M
Sbjct: 406 RHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVHLIQKLTNLM 454
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 15/233 (6%)
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-------GICPTVATYTSV-VKCLCSCG 133
P + +F+ ++ Y+R + +L F++ G P A+ ++ V LC G
Sbjct: 101 PPLAAFAPLVRRYARLGRAPAALRAFQFLRRHPDRYMAGGDIPAAASLLNMAVDALCKEG 160
Query: 134 RIEDAEELLGEMVRN--GVSPSAETYNCFFKEYR--GRKDANGAMKLYRQMKEDDLCVPN 189
A EL R P YN + GR D G KL+ +M+ + P
Sbjct: 161 HPRAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVG--KLWAEMRLAGV-RPT 217
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+ TY LI R D + + ++ + +L + +++ L + ++++A +
Sbjct: 218 VVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLE 277
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
+ G+ P TF +L G + L + K + E I+ + NY F
Sbjct: 278 KFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFF 330
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 152/306 (49%), Gaps = 11/306 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI C R A + L +MIE+ + PN+VT+N L++ +
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK---------- 304
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AEK++D+M R I+PD+ +++ +++ + + + FM K P V T
Sbjct: 305 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 364
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+ED EL EM G+ TY + D + A K+++QM
Sbjct: 365 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 424
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + P+I TY+IL+ +++ E++++++ SE+ LD+ YT +I G+C+ K
Sbjct: 425 SDGV-PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 483
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
+ F + KG+ P VT+ T+ GL +L+ L KK+ E+ S N
Sbjct: 484 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 543
Query: 302 FKPYRR 307
+ + R
Sbjct: 544 IRAHLR 549
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 149/290 (51%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI+G N+ A + M++RG +PN+VTY V++NG+C+R
Sbjct: 150 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL---- 205
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M IE DV F+ ++ + +L+ M+ KGI P V T
Sbjct: 206 ------ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 259
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLCS GR DA +LL +M+ ++P+ T+N + A KLY M
Sbjct: 260 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 319
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TYN L+ F +R+D ++++ + + D+ +Y LI G C+ ++
Sbjct: 320 KRSI-DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 378
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++ + F EM +GL+ VT+ TL +GL +++ K++ + +
Sbjct: 379 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 428
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 133/276 (48%), Gaps = 11/276 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI +C+ ++I +A LG+M++ G EP++VT + LLNG C K I
Sbjct: 85 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH----------GKRIS 134
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + D+M G PD +F+ ++H +K ++ ++ M ++G P + TY VV
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G + A LL +M + +N + + A+ L+++M+ +
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI- 253
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+ TY+ LI + R ++ + + ++ +L ++ LI ++ K+ EA +
Sbjct: 254 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 313
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ +MI++ + P T+ +L G D L +++
Sbjct: 314 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 349
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 136/306 (44%), Gaps = 18/306 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNE 59
+P++ + L+ K+ + D+ LGE ++R + + TYN+L+N CRR+
Sbjct: 44 LPSIVEFNKLLSAIAKMKKFDVVIS-LGEKMQRLEIVHGLYTYNILINCFCRRSQ----- 97
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
I A + +M G EP + + S +L+ Y + ++ ++ M E G P
Sbjct: 98 -----ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 152
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+T+++ L + +A L+ MV+ G P+ TY R D + A+ L +
Sbjct: 153 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 212
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ + ++ +N +I +D ++ ++ + ++ +Y+ LI LC
Sbjct: 213 MEAAKI-EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 271
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFG 294
+W +A Q +MIEK + P VTF L ++ +L K+ +D + T+
Sbjct: 272 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 331
Query: 295 SEFQNY 300
S +
Sbjct: 332 SLVNGF 337
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 10/176 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT+LI G D A++ +M+ GV P+++TY++LL+G+C N + EK +
Sbjct: 400 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN------NGKLEKAL- 452
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+VFD M+ I+ D+ ++ ++ +A K D + KG+ P V TY +++
Sbjct: 453 ---EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 509
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
LCS +++A LL +M +G P++ TYN + + D + +L R+M+
Sbjct: 510 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 565
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
+++DA L G MV++ PS +N K + + L +M+ ++ V ++TY
Sbjct: 27 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEI-VHGLYTY 85
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM--LIHGLCEKQKWKEACQYFVEM 251
NILI F +++ + + K +LG + T+ L++G C ++ +A +M
Sbjct: 86 NILINCFCRRSQISLALALLG--KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143
Query: 252 IEKGLLPQKVTFETLYRGL 270
+E G P +TF TL GL
Sbjct: 144 VEMGYRPDTITFTTLIHGL 162
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 152/306 (49%), Gaps = 11/306 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI C R A + L +MIE+ + PN+VT+N L++ +
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK---------- 342
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AEK++D+M R I+PD+ +++ +++ + + + FM K P V T
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+ED EL EM G+ TY + D + A K+++QM
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + P+I TY+IL+ +++ E++++++ SE+ LD+ YT +I G+C+ K
Sbjct: 463 SDGV-PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 521
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
+ F + KG+ P VT+ T+ GL +L+ L KK+ E+ S N
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
Query: 302 FKPYRR 307
+ + R
Sbjct: 582 IRAHLR 587
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 149/290 (51%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI+G N+ A + M++RG +PN+VTY V++NG+C+R
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL---- 243
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M IE DV F+ ++ + +L+ M+ KGI P V T
Sbjct: 244 ------ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLCS GR DA +LL +M+ ++P+ T+N + A KLY M
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TYN L+ F +R+D ++++ + + D+ +Y LI G C+ ++
Sbjct: 358 KRSI-DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++ + F EM +GL+ VT+ TL +GL +++ K++ + +
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 133/276 (48%), Gaps = 11/276 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI +C+ ++I +A LG+M++ G EP++VT + LLNG C K I
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH----------GKRIS 172
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + D+M G PD +F+ ++H +K ++ ++ M ++G P + TY VV
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G + A LL +M + +N + + A+ L+++M+ +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI- 291
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+ TY+ LI + R ++ + + ++ +L ++ LI ++ K+ EA +
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ +MI++ + P T+ +L G D L +++
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 136/306 (44%), Gaps = 18/306 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNE 59
+P++ + L+ K+ + D+ LGE ++R + + TYN+L+N CRR+
Sbjct: 82 LPSIVEFNKLLSAIAKMKKFDVVIS-LGEKMQRLEIVHGLYTYNILINCFCRRSQ----- 135
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
I A + +M G EP + + S +L+ Y + ++ ++ M E G P
Sbjct: 136 -----ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+T+++ L + +A L+ MV+ G P+ TY R D + A+ L +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 250
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ + ++ +N +I +D ++ ++ + ++ +Y+ LI LC
Sbjct: 251 MEAAKI-EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 309
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFG 294
+W +A Q +MIEK + P VTF L ++ +L K+ +D + T+
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 295 SEFQNY 300
S +
Sbjct: 370 SLVNGF 375
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 10/176 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT+LI G D A++ +M+ GV P+++TY++LL+G+C N + EK +
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN------NGKLEKAL- 490
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+VFD M+ I+ D+ ++ ++ +A K D + KG+ P V TY +++
Sbjct: 491 ---EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
LCS +++A LL +M +G P++ TYN + + D + +L R+M+
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
+++DA L G MV++ PS +N K + + L +M+ ++ V ++TY
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEI-VHGLYTY 123
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM--LIHGLCEKQKWKEACQYFVEM 251
NILI F +++ + + K +LG + T+ L++G C ++ +A +M
Sbjct: 124 NILINCFCRRSQISLALALLG--KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 252 IEKGLLPQKVTFETLYRGL 270
+E G P +TF TL GL
Sbjct: 182 VEMGYRPDTITFTTLIHGL 200
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 152/291 (52%), Gaps = 12/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT+L+ GWC+ I AE+ EM G+EPNV TY+++++ +CR
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQ------- 305
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A VF +M G P+ +F+ ++ V+ +A + + L N MK+ G P T
Sbjct: 306 ---ISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTIT 362
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +E+A ++L M++ +A T+N F+ ++D NGA ++Y +M
Sbjct: 363 YNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMM 422
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C PN TYNIL+ MF+ DMV ++ + E+ ++++Y +L+ C W
Sbjct: 423 EAK-CEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHW 481
Query: 242 KEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + F EM+ EK L P +E + L ++ L+ L +K+ ++ +
Sbjct: 482 NNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 137/289 (47%), Gaps = 12/289 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+++ +T LI + + A M + G P+ + ++++++ + R+
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRK---------- 234
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A+ FD ++ R EPDV ++ ++ + RA + + MK GI P V TY
Sbjct: 235 RRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTY 293
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ V+ LC CG+I A ++ +M+ +G +P+A T+N + + +++Y QMK+
Sbjct: 294 SIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKK 353
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P+ TYN LI ++ ++ N + + ++ ++ + + +K+
Sbjct: 354 LG-CEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVN 412
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + + +M+E P VT+ L R + S ++KK++D++ +
Sbjct: 413 GAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEV 461
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 146/282 (51%), Gaps = 11/282 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +L++GWCK ++ A + EM E G +P+V+TY L+ C
Sbjct: 262 PDESSFNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYC----------M 311
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + + +EMR +G P+V +++IV+H +A + Q +LD + ++ G P +
Sbjct: 312 EKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASF 371
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ L GR+EDA ++ +M GV P+ T+N A A+K+ +M+
Sbjct: 372 YNSLIYILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKME 431
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P+I TY L+ + + ++R + H+ ++ D +YT+L+ LC K
Sbjct: 432 EQS-CKPDIKTYTPLLKLCCKRQWIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRNGKP 490
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
++C + EM+ KG P+K TF+ + L ++++ ++++
Sbjct: 491 AQSCLFLEEMVLKGFAPKKETFDLVAEKLDKANLHSAKKKIQ 532
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 123/274 (44%), Gaps = 14/274 (5%)
Query: 27 LGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTS 86
+M + GV + NVLL+ +C+ E++++ A F E+R + PD +S
Sbjct: 218 FNKMDQFGVVKDTTAMNVLLDTLCK----------ERSVKRARGAFQELR-GSVPPDESS 266
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F+ ++H + +A + D + M+E G P+V TYTS+++ C + +L EM
Sbjct: 267 FNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMR 326
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G P+ TY A+ ++ +++ D C P+ YN LI + R+
Sbjct: 327 SKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDG-CAPDASFYNSLIYILGRAGRL 385
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + + ++ + + + ++ LI C+ + + A + V+M E+ P T+ L
Sbjct: 386 EDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPL 445
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
+ + ++ R L + + IT +F Y
Sbjct: 446 LKLCCKRQWIKVLRFLICHMFRKDIT--PDFSTY 477
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 149/286 (52%), Gaps = 13/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YTSL++GWC+ I AER GEM G++PNV TY+++++ +CR
Sbjct: 248 PDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQ------- 300
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A VF EM G +P+ +F+ ++ V+ +A + + L N MK G P T
Sbjct: 301 ---ITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAIT 357
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +E+A ++L V+ G + +A ++N F D N A +++ +MK
Sbjct: 358 YNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMK 416
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C PN TYNIL+ MF DMV ++ + +E+ + ++Y +LI C W
Sbjct: 417 -DLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHW 475
Query: 242 KEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A +F EMI EK L P +E + + L ++ L+ L +K+
Sbjct: 476 NNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKM 521
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 13/288 (4%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
V+ +T L+ + K A M + G +P+ + ++V+++ + ++ +
Sbjct: 181 VETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKK----------R 230
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
A+ FD ++ R EPDV ++ ++H + RA + MK GI P V TY+
Sbjct: 231 RAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYS 289
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
V+ LC G+I A ++ EM+ G P+A T+N + + +++Y QMK
Sbjct: 290 IVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRL 349
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
C P+ TYN LI + ++ +I N VK L+ S+ + + +
Sbjct: 350 G-CPPDAITYNFLIESHCRDDNLEEAVKILNSVKKG-CNLNASSFNPIFGCISKLGDVNS 407
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + F +M + P VT+ L R +L+K++DE I
Sbjct: 408 AHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEI 455
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + + K+ ++ A R +M + PN VTYN+L+ +
Sbjct: 388 NASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADK---------- 437
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-SRAHKPQLSLDKLNFMKEKGICPTVAT 121
K+ K+ EM IEP+ ++ +++ + H ++EK + P++
Sbjct: 438 KSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPV 497
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNG 149
Y V++ L G+++ EEL+ +MV G
Sbjct: 498 YEMVLQQLRKAGQLKKHEELVEKMVNRG 525
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 149/286 (52%), Gaps = 13/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YTSL++GWC+ I AER GEM G++PNV TY+++++ +CR
Sbjct: 213 PDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQ------- 265
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A VF EM G +P+ +F+ ++ V+ +A + + L N MK G P T
Sbjct: 266 ---ITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAIT 322
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +E+A ++L V+ G + +A ++N F D N A +++ +MK
Sbjct: 323 YNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMK 381
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C PN TYNIL+ MF DMV ++ + +E+ + ++Y +LI C W
Sbjct: 382 -DLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHW 440
Query: 242 KEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A +F EMI EK L P +E + + L ++ L+ L +K+
Sbjct: 441 NNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKM 486
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 13/262 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M + G +P+ + ++V+++ + ++ + A+ FD ++ R EPDV ++
Sbjct: 172 MEDYGCKPDKIAFSVVISSLSKK----------RRAIEAQSFFDSLKDR-FEPDVVVYTS 220
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++H + RA + MK GI P V TY+ V+ LC G+I A ++ EM+ G
Sbjct: 221 LVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVG 280
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P+A T+N + + +++Y QMK C P+ TYN LI + ++
Sbjct: 281 CDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLG-CPPDAITYNFLIESHCRDDNLEEA 339
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+I N VK L+ S+ + + + A + F +M + P VT+ L R
Sbjct: 340 VKILNSVKKG-CNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRM 398
Query: 270 LIQSDMLRTWRRLKKKLDEESI 291
+L+K++DE I
Sbjct: 399 FADKKSTDMVLKLRKEMDENEI 420
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + + K+ ++ A R +M + PN VTYN+L+ +
Sbjct: 353 NASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADK---------- 402
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-SRAHKPQLSLDKLNFMKEKGICPTVAT 121
K+ K+ EM IEP+ ++ +++ + H ++EK + P++
Sbjct: 403 KSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPV 462
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNG 149
Y V++ L G+++ EEL+ +MV G
Sbjct: 463 YEMVLQQLRKAGQLKKHEELVEKMVNRG 490
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 145/282 (51%), Gaps = 11/282 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +L++GWCK + A + EM + G P+VVTY L+ C
Sbjct: 327 PDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYC----------M 376
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + + DEMR R P+V +++I++H +A + + +LD + +KE G+ P +
Sbjct: 377 EKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASF 436
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ L GR+EDA ++ EM G++P+ T+N A A+KL +M+
Sbjct: 437 YNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKME 496
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P+I TY L+ + + ++ + H+ ++ D +YT+L+ LC K
Sbjct: 497 EQS-CNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKV 555
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
++C + EM+ KG P++ TF+ + L + ++ +++++
Sbjct: 556 AQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYKKIQ 597
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 101/257 (39%), Gaps = 47/257 (18%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
GV + NVLL+ +C+ E++++ A VF E+R I PD SF+ ++H
Sbjct: 290 GVVKDTKAMNVLLDTLCK----------ERSVKRARGVFQELR-GTIPPDENSFNTLVHG 338
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ C +++A + + EM ++G SPS
Sbjct: 339 W-----------------------------------CKARMLKEALDTMEEMKQHGFSPS 363
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
TY + Y KD L +M++ C PN+ TY IL+ R + +
Sbjct: 364 VVTYTSLVEAYCMEKDFQTVYALLDEMRKRR-CPPNVVTYTILMHALGKAGRTREALDTF 422
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ +K + D Y LI+ L + ++A EM G+ P TF TL
Sbjct: 423 DKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDH 482
Query: 274 DMLRTWRRLKKKLDEES 290
+L K++E+S
Sbjct: 483 SQAENALKLLVKMEEQS 499
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 86/214 (40%), Gaps = 2/214 (0%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
S+ +++ + + + L +N M E G ++ T T V++ L R +A + +M
Sbjct: 227 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 286
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
R GV + N + A ++++++ P+ +++N L+ +
Sbjct: 287 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELR--GTIPPDENSFNTLVHGWCKARM 344
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ + +K + +YT L+ C ++ ++ EM ++ P VT+
Sbjct: 345 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 404
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
L L ++ R KL E+ + + F N
Sbjct: 405 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYN 438
>gi|449437378|ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
gi|449503560|ref|XP_004162063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
Length = 615
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 154/288 (53%), Gaps = 15/288 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ Y LI GW + ++ A+R EM + + P VVTY L+ G CR
Sbjct: 265 PSIRAYNILINGWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRM--------- 315
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN-FMK-EKGICPTV 119
+++ A ++ DEMR GIEP+ ++ ++ A + + +L + FM E+G PT+
Sbjct: 316 -RSVEIAIELVDEMRREGIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQG--PTI 372
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+TY S+VK C G + A ++L M+ G +P+ TYN FF+ + +M LY +
Sbjct: 373 STYNSLVKGYCKAGDLSGASKILKMMIGRGFTPTPTTYNYFFRFFSKYGKIEESMSLYNK 432
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E P+ TY++L+ M R+++ ++ N +K +DL + TML+H LC+
Sbjct: 433 MIESGYA-PDKLTYHLLLKMLCEEERLNLAVQVCNEMKARGFDMDLATSTMLMHLLCKMH 491
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
K++EA F MI +G++PQ +TF L+ ++ + + +L++ +
Sbjct: 492 KFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMS 539
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++++R + D + GI P + V + + K SL L K+ G P+ A
Sbjct: 98 DRSVRPGAALEDALDRTGIVPSSSLLEAVFDHFDSSPKFLHSL-FLWAAKKSGFRPSAAL 156
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSP---SAETYNCFFKEYRGRKDANGAMKLYR 178
+ ++ L + A L+ +R G S E + + Y A++ Y
Sbjct: 157 FNRLINVLAKSREFDSAWSLITSRLRGGEESFLVSVEVFVILIRRYARAGMVQPAIRTY- 215
Query: 179 QMKEDDLCVPNIHT---------YNILIGMFMALNRMDMVREIWNHVK--GSELGLDLDS 227
+ C N+ T + IL+ + + E +N + GS + +
Sbjct: 216 ----EFAC--NLETISGTGSEGLFEILLDSLCKEGHVRVASEYFNRKREMGSSFEPSIRA 269
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
Y +LI+G +K K A + + EM + + P VT+ TL G
Sbjct: 270 YNILINGWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEG 311
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 145/282 (51%), Gaps = 11/282 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +L++GWCK + A + EM + G P+VVTY L+ C
Sbjct: 268 PDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYC----------M 317
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + + DEMR R P+V +++I++H +A + + +LD + +KE G+ P +
Sbjct: 318 EKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASF 377
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ L GR+EDA ++ EM G++P+ T+N A A+KL +M+
Sbjct: 378 YNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKME 437
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P+I TY L+ + + ++ + H+ ++ D +YT+L+ LC K
Sbjct: 438 EQS-CNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKV 496
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
++C + EM+ KG P++ TF+ + L + ++ +++++
Sbjct: 497 AQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYKKIQ 538
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 101/257 (39%), Gaps = 47/257 (18%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
GV + NVLL+ +C+ E++++ A VF E+R I PD SF+ ++H
Sbjct: 231 GVVKDTKAMNVLLDTLCK----------ERSVKRARGVFQELR-GTIPPDENSFNTLVHG 279
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ +A + +LD + EM ++G SPS
Sbjct: 280 WCKARMLKEALDTME-----------------------------------EMKQHGFSPS 304
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
TY + Y KD L +M++ C PN+ TY IL+ R + +
Sbjct: 305 VVTYTSLVEAYCMEKDFQTVYALLDEMRKRR-CPPNVVTYTILMHALGKAGRTREALDTF 363
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ +K + D Y LI+ L + ++A EM G+ P TF TL
Sbjct: 364 DKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDH 423
Query: 274 DMLRTWRRLKKKLDEES 290
+L K++E+S
Sbjct: 424 SQAENALKLLVKMEEQS 440
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 86/214 (40%), Gaps = 2/214 (0%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
S+ +++ + + + L +N M E G ++ T T V++ L R +A + +M
Sbjct: 168 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 227
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
R GV + N + A ++++++ P+ +++N L+ +
Sbjct: 228 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELR--GTIPPDENSFNTLVHGWCKARM 285
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ + +K + +YT L+ C ++ ++ EM ++ P VT+
Sbjct: 286 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 345
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
L L ++ R KL E+ + + F N
Sbjct: 346 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYN 379
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 144/285 (50%), Gaps = 17/285 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI G C +I A +MI G +PNVVTY L+NG+C+
Sbjct: 113 PDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK---------- 162
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A +F EM +GI P++ +++ ++H + + + +N M + I P V T
Sbjct: 163 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 222
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+VV LC G + +A +++ M+ GV P+ TYN + R + + A+K++ M
Sbjct: 223 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 282
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D CV N+ +YN LI + + +D ++ + EL + +Y LIHGLC +
Sbjct: 283 HKD-CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 341
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
++A F EM+ +G +P VT+ TL SD L R L K +
Sbjct: 342 QDAISLFHEMVARGQIPDLVTYRTL------SDYLCKNRHLDKAM 380
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 24/290 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V LI +C + R+ A L ++++ G +P+VVTY L+NG+C+
Sbjct: 614 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK---------- 663
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
M +GI PD+ +++ ++H + + LN M I P V
Sbjct: 664 -------------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 710
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++VV LC G I A +++ M++ GV P TY + R + + A+K++ M
Sbjct: 711 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 770
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
CVPN+ +YNILI + + RMD + + L D +Y LIHGLC +
Sbjct: 771 HKG-CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRL 829
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ A F EM+ G +P VT+ L L ++ L L K ++ ++
Sbjct: 830 QHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 879
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 131/256 (51%), Gaps = 11/256 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV ++++++ CK I +A + MI+RGVEP+VVTY L++G C R+ +
Sbjct: 705 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM----- 759
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVFD M +G P+V S++I+++ Y + + ++ L M +G+
Sbjct: 760 -----DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTV 814
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC GR++ A L EMV +G P TY AM L + +
Sbjct: 815 TYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAI 874
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +L +I YNI I ++ R++++++ L D+ +Y ++IHGLC++
Sbjct: 875 EGSNLDA-DILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGL 933
Query: 241 WKEACQYFVEMIEKGL 256
EA + F +M E +
Sbjct: 934 LDEANKLFRKMDENDI 949
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 141/287 (49%), Gaps = 12/287 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V +++ CK + A + MI RGVEPNVVTYN L++G C R NE
Sbjct: 217 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR-----NE- 270
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A KVFD M + +V S++ +++ Y + ++ M + + P
Sbjct: 271 ----VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 326
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC GR++DA L EMV G P TY + + AM L + +
Sbjct: 327 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 386
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P+I Y ++ ++ R++++++ L ++ +Y ++IHGLC++
Sbjct: 387 EGSNW-DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 445
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD-MLRTWRRLKKKL 286
EA + F EM + G P T+ + RG ++++ LRT L++ L
Sbjct: 446 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 492
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 137/312 (43%), Gaps = 26/312 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-----RASLH 56
PNV Y +LI G CK ++ A EMI +G+ PN+VTYN L++G+C+ +
Sbjct: 148 PNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 207
Query: 57 PNERF--------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
NE E + A V D M RG+EP+V +++ ++ +
Sbjct: 208 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 267
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ +++ + M K V +Y +++ C ++ A L EM R ++P+ T
Sbjct: 268 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 327
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN A+ L+ +M +P++ TY L +D + +
Sbjct: 328 YNTLIHGLCHVGRLQDAISLFHEMVARGQ-IPDLVTYRTLSDYLCKNRHLDKAMALLKAI 386
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+GS D+ YT ++ G+C + ++A F + KGL P T+ + GL + +L
Sbjct: 387 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 446
Query: 277 RTWRRLKKKLDE 288
+L ++++
Sbjct: 447 AEASKLFSEMNK 458
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 11/230 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y +LI G+CKI +D A EM + + PN VTYN L++G+C L
Sbjct: 289 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL------- 341
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++A +F EM RG PD+ ++ + + ++ L ++ P + Y
Sbjct: 342 ---QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 398
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ +C G +EDA +L + G+ P+ TYN + A KL+ +M +
Sbjct: 399 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 458
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
+ C PN TYN++ F+ N E+ + +D+ + T+L+
Sbjct: 459 NG-CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 507
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 11/199 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +LI+G C + R+ A EM+ RG P++VTY L + +C+ N
Sbjct: 323 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCK------NRHL 376
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K A + + +PD+ ++ +L RA + + + D + + KG+ P V T
Sbjct: 377 DK----AMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWT 432
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G + +A +L EM +NG SP+ TYN + + +A ++L +M
Sbjct: 433 YNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 492
Query: 182 EDDLCVPNIHTYNILIGMF 200
V ++ T +L+GM
Sbjct: 493 ARGFSV-DVSTTTLLVGML 510
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 11/252 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N +D A M+ + P+ V +N LL + + + T+ + + D
Sbjct: 24 NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAK-------TKHHSTLLSLSRQMDSF-- 74
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
GI PDV + +IV++ ++ + L + + G P T+T++++ LC G+I +
Sbjct: 75 -GIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGE 133
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A L +M+ G P+ TY + A ++ +M + PNI TYN LI
Sbjct: 134 ALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGIS-PNIVTYNSLI 192
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
L V + N + S++ D+ + ++ LC++ EA MI +G+
Sbjct: 193 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 252
Query: 258 PQKVTFETLYRG 269
P VT+ L G
Sbjct: 253 PNVVTYNALMDG 264
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 5/225 (2%)
Query: 54 SLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA--HKPQLSLDKLNFMK 111
+ H T+ A F+ M + P F+ +L ++ H LSL + M
Sbjct: 15 TFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQ--MD 72
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
GI P V T V+ LC R++ A L ++++ G P A T+ +
Sbjct: 73 SFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIG 132
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A+ L+ +M + PN+ TY LI ++ I++ + + ++ +Y L
Sbjct: 133 EALHLFDKMIGEGF-QPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
IHGLC+ +WK EM++ ++P T T+ L + M+
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMV 236
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 145/282 (51%), Gaps = 11/282 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +L++GWCK + A + EM + G P+VVTY L+ C
Sbjct: 1547 PDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYC----------M 1596
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + + DEMR R P+V +++I++H +A + + +LD + +KE G+ P +
Sbjct: 1597 EKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASF 1656
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ L GR+EDA ++ EM G++P+ T+N A A+KL +M+
Sbjct: 1657 YNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKME 1716
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P+I TY L+ + + ++ + H+ ++ D +YT+L+ LC K
Sbjct: 1717 EQS-CNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKV 1775
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
++C + EM+ KG P++ TF+ + L + ++ +++++
Sbjct: 1776 AQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYKKIQ 1817
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 101/257 (39%), Gaps = 47/257 (18%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
GV + NVLL+ +C+ E++++ A VF E+R I PD SF+ ++H
Sbjct: 1510 GVVKDTKAMNVLLDTLCK----------ERSVKRARGVFQELR-GTIPPDENSFNTLVHG 1558
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ C +++A + + EM ++G SPS
Sbjct: 1559 W-----------------------------------CKARMLKEALDTMEEMKQHGFSPS 1583
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
TY + Y KD L +M++ C PN+ TY IL+ R + +
Sbjct: 1584 VVTYTSLVEAYCMEKDFQTVYALLDEMRKRR-CPPNVVTYTILMHALGKAGRTREALDTF 1642
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ +K + D Y LI+ L + ++A EM G+ P TF TL
Sbjct: 1643 DKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDH 1702
Query: 274 DMLRTWRRLKKKLDEES 290
+L K++E+S
Sbjct: 1703 SQAENALKLLVKMEEQS 1719
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 86/214 (40%), Gaps = 2/214 (0%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
S+ +++ + + + L +N M E G ++ T T V++ L R +A + +M
Sbjct: 1447 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 1506
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
R GV + N + A ++++++ P+ +++N L+ +
Sbjct: 1507 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELR--GTIPPDENSFNTLVHGWCKARM 1564
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ + +K + +YT L+ C ++ ++ EM ++ P VT+
Sbjct: 1565 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 1624
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
L L ++ R KL E+ + + F N
Sbjct: 1625 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYN 1658
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 145/282 (51%), Gaps = 11/282 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +L++GWCK + A + EM + G P+VVTY L+ C
Sbjct: 1588 PDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYC----------M 1637
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + + DEMR R P+V +++I++H +A + + +LD + +KE G+ P +
Sbjct: 1638 EKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASF 1697
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ L GR+EDA ++ EM G++P+ T+N A A+KL +M+
Sbjct: 1698 YNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKME 1757
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P+I TY L+ + + ++ + H+ ++ D +YT+L+ LC K
Sbjct: 1758 EQS-CNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKV 1816
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
++C + EM+ KG P++ TF+ + L + ++ +++++
Sbjct: 1817 AQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYKKIQ 1858
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 12/235 (5%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
GV + NVLL+ +C+ E++++ A VF E+R I PD SF+ ++H
Sbjct: 1551 GVVKDTKAMNVLLDTLCK----------ERSVKRARGVFQELR-GTIPPDENSFNTLVHG 1599
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ +A + +LD + MK+ G P+V TYTS+V+ C + LL EM + P+
Sbjct: 1600 WCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPN 1659
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
TY A+ + ++KED + P+ YN LI + R++ +
Sbjct: 1660 VVTYTILMHALGKAGRTREALDTFDKLKEDGV-APDASFYNSLIYILGRAGRLEDAYSVV 1718
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++ + + ++ ++ LI C+ + + A + V+M E+ P T+ L +
Sbjct: 1719 EEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLK 1773
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/214 (18%), Positives = 86/214 (40%), Gaps = 2/214 (0%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
S+ +++ + + + L +N M E G ++ T T V++ L R +A + +M
Sbjct: 1488 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 1547
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
R GV + N + A ++++++ P+ +++N L+ +
Sbjct: 1548 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELR--GTIPPDENSFNTLVHGWCKARM 1605
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ + +K + +YT L+ C ++ ++ EM ++ P VT+
Sbjct: 1606 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 1665
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
L L ++ R KL E+ + + F N
Sbjct: 1666 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYN 1699
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 143/278 (51%), Gaps = 11/278 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ LI+G+CK +A + + EM + G P+VV+Y+ + C +K R
Sbjct: 229 FNILIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCE----------QKDFR 278
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
N E VFDEM+ +G +P+V +++ V+H +A + +L+ MK G P Y+S++
Sbjct: 279 NVEAVFDEMQEKGCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLI 338
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
L GRI+DA ++ +M + GV + YN A+KL +M E D C
Sbjct: 339 YVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLLERM-EGDSC 397
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++ TY L+ M + +++ + +H+ + + +DL +YT+L++ C K + AC
Sbjct: 398 KPDVKTYAPLLKMCCRRKSIKLLKFLLSHMFKNNVSVDLGTYTLLVNEFCRNGKLEHACF 457
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
YF E + KG++P TF+ L L Q +M +++K
Sbjct: 458 YFQEAVLKGMVPMVKTFKALVEELEQKNMKEMKEKIEK 495
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 10/163 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ K Y+SLIY + RI A +M ++GV N+ YN +++ C +
Sbjct: 328 LPDSKFYSSLIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNTMISSACAHSQGG---- 383
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A K+ + M +PDV +++ +L + R +L L+ M + + +
Sbjct: 384 ------SALKLLERMEGDSCKPDVKTYAPLLKMCCRRKSIKLLKFLLSHMFKNNVSVDLG 437
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163
TYT +V C G++E A E V G+ P +T+ +E
Sbjct: 438 TYTLLVNEFCRNGKLEHACFYFQEAVLKGMVPMVKTFKALVEE 480
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 2/180 (1%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
++AT + V++ L + +DA ++ + + G S E N D A +
Sbjct: 156 SLATASKVMRRLAKARKYKDAIDVFRGIEKYGASKDREALNVLMDALVKEGDVEDAHSAF 215
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+ K D + ++NILI + + R+I ++ D+ SY+ I CE
Sbjct: 216 LEFK--DCITLDSSSFNILIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCE 273
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
++ ++ F EM EKG P +T+ T+ L ++ L + +K+ S+F
Sbjct: 274 QKDFRNVEAVFDEMQEKGCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKF 333
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 144/287 (50%), Gaps = 17/287 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +LI +CK+ RID A L M +G++PN+++YNV++NG+CR
Sbjct: 246 LPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCR--------- 296
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E +++ A ++ +EM +G PD +++ +L+ Y + +L M G+ P+V
Sbjct: 297 -EGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVV 355
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ +C + A E +M G+ P+ TY + + N A ++ +M
Sbjct: 356 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 415
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E P++ TYN I L RM+ + + L D+ SY+ +I G C K +
Sbjct: 416 TESGFS-PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 474
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
A Q EM+EKG+ P VT+ +L +GL + RRL + D
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCE------MRRLTEACD 515
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 137/291 (47%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y LI G+C + + GEM G PNVVTYN L++ C+
Sbjct: 212 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR------- 264
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + M +G++P++ S++++++ R + + + L M KG P T
Sbjct: 265 ---IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVT 321
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C G A + EMVRNGVSPS TY ++ N AM+ + QM+
Sbjct: 322 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 381
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L PN TY LI F ++ I N + S + +Y IHG C ++
Sbjct: 382 IRGL-RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 440
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+EA EM+EKGL P V++ T+ G + L ++K+++ E+ ++
Sbjct: 441 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 491
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 143/291 (49%), Gaps = 12/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +L+ G+CK A EM+ GV P+VVTY L+N +C+
Sbjct: 317 PDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCK---------- 366
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A + FD+MR+RG+ P+ +++ ++ +SR + LN M E G P+V T
Sbjct: 367 ARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVT 426
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + + C R+E+A ++ EMV G++P +Y+ + + + + A ++ ++M
Sbjct: 427 YNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV 486
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + P+ TY+ LI + R+ ++ + L D +YT LI+ C +
Sbjct: 487 EKGVS-PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDL 545
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD-EESI 291
+A EMI KG LP VT+ L GL + R +RL KL EES+
Sbjct: 546 NKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV 596
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 131/286 (45%), Gaps = 32/286 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + YT+LI G+ + ++ A R L EM E G P+VVTYN ++G C ER
Sbjct: 387 PNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL------ERM 440
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + V EM +G+ PDV S+S ++ + R + + M EKG+ P T
Sbjct: 441 EEAL----GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVT 496
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S+++ LC R+ +A +L EM+ G+ P TY Y D N A+ L+ +M
Sbjct: 497 YSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMI 556
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVRE--------IWNHVKGSELGLD--------- 224
+P+ TY++LI LN+ RE I+ S++ D
Sbjct: 557 HKGF-LPDAVTYSVLIN---GLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNI 612
Query: 225 -LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
S LI G C K EA + F M+E+ P + + + G
Sbjct: 613 EFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHG 658
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 11/284 (3%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPNERFEKTIRNA 68
++ + +N ID A + G P V++YN +L+ + R R S+ +A
Sbjct: 148 MVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVK---------LSA 198
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
E+V+ EM + P+V +++I++ + + Q L M+ G P V TY +++
Sbjct: 199 EEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDA 258
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
C GRI++A LL M G+ P+ +YN A ++ +M P
Sbjct: 259 YCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGF-TP 317
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
+ TYN L+ + I + + + + +YT LI+ +C+ + A ++F
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 377
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+M +GL P + T+ TL G + +L R+ ++ E +
Sbjct: 378 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 421
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 92/228 (40%), Gaps = 41/228 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
P+ YT+LI +C ++ A EMI +G P+ VTY+VL+NG+ ++A
Sbjct: 527 PDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 586
Query: 54 --------SLHPNERFEKTIRN------------------------AEKVFDEMRVRGIE 81
S+ + ++ I N A++VF+ M R +
Sbjct: 587 LFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHK 646
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
P +++++H + R + + M G P T +++K L G E+ E+
Sbjct: 647 PGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEV 706
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
+G+ +R+ AE + + + + M +D L +PN
Sbjct: 707 IGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGL-LPN 753
>gi|326500578|dbj|BAK06378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 546
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 148/287 (51%), Gaps = 21/287 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + Y L+ GW R+D + EM GV P VV+Y L+ VCR P++
Sbjct: 189 PDERTYNMLLDGWSTARRMDKVGKLWAEMCVAGVRPTVVSYGTLIKAVCR--VQQPDQ-- 244
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + DEMR GIE ++ + + ++H + A + + + + L G+ P ++T
Sbjct: 245 ------AVSLLDEMRKEGIEANLVTCNPIVHALAHAGRFRDAYNLLEKFPLYGVAPNIST 298
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S+V C G + A +L M+ G+ P+A+TYN FF + + M LY +M
Sbjct: 299 FNSLVLAYCKYGDLAGASGVLKAMMGRGILPTAKTYNYFFVFFAKTGNVELGMNLYNKMV 358
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ TYN+L+ M NR+++V ++ ++ + DL + TMLIH LC ++
Sbjct: 359 NNGYA-PDQTTYNLLVKMLCEANRLELVVQMIKEMRANGFESDLATSTMLIHLLCRSHRF 417
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYR-----GLIQ-----SDMLRT 278
+EAC F +M +G +PQ +T+ L + GL++ +D++R+
Sbjct: 418 EEACAEFKDMFRRGHVPQYITYRMLMKELKRLGLVELEEKLTDLMRS 464
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 11/148 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P K Y + K +++ +M+ G P+ TYN+L+ +C R
Sbjct: 328 LPTAKTYNYFFVFFAKTGNVELGMNLYNKMVNNGYAPDQTTYNLLVKMLCE------ANR 381
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + ++ EMR G E D+ + ++++H+ R+H+ + + + M +G P
Sbjct: 382 LELVV----QMIKEMRANGFESDLATSTMLIHLLCRSHRFEEACAEFKDMFRRGHVPQYI 437
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN 148
TY ++K L G +E EE L +++R+
Sbjct: 438 TYRMLMKELKRLGLVE-LEEKLTDLMRS 464
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%)
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A KL ++ + + P+ TYN+L+ + RMD V ++W + + + + SY LI
Sbjct: 174 AAKLVKRCRREGELAPDERTYNMLLDGWSTARRMDKVGKLWAEMCVAGVRPTVVSYGTLI 233
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+C Q+ +A EM ++G+ VT + L + R L +K
Sbjct: 234 KAVCRVQQPDQAVSLLDEMRKEGIEANLVTCNPIVHALAHAGRFRDAYNLLEKF 287
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 141/290 (48%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +L+ G CK+ A R L M+++ PNV+ YN +++ +C+
Sbjct: 215 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK---------- 264
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A +F EM +GI PD+ +++ ++H + + LN M I P V
Sbjct: 265 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 324
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++VV LC G I A +++ M++ GV P TY + R + + A+K++ M
Sbjct: 325 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 384
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
CVPN+ +YNILI + + RMD + + L D +Y LIHGLC +
Sbjct: 385 HKG-CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRL 443
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ A F EM+ G +P VT+ L L ++ L L K ++ ++
Sbjct: 444 QHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 493
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 11/217 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV ++++++ CK I +A + MI+RGVEP+VVTY L++G C R+ +
Sbjct: 319 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM----- 373
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVFD M +G P+V S++I+++ Y + + ++ L M +G+
Sbjct: 374 -----DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTV 428
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC GR++ A L EMV +G P TY AM L + +
Sbjct: 429 TYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAI 488
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
+ +L +I YNI I ++ R++++++
Sbjct: 489 EGSNL-DADILVYNIAIDGMCRAGELEAARDLFSNLS 524
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 121/271 (44%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V LI +C + R+ A L ++++ G +P+ T+N L+ G+C
Sbjct: 145 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLC----------V 194
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A +FD+ G +PDV ++ +++ + ++ L M +K P V
Sbjct: 195 EGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIA 254
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC ++ +A L EM+ G+SP TYN + L +M
Sbjct: 255 YNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 314
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PN+ ++ ++ + + ++ + + + D+ +YT L+ G C + +
Sbjct: 315 NSKI-MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM 373
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA + F M+ KG +P ++ L G Q
Sbjct: 374 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQ 404
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 118/283 (41%), Gaps = 16/283 (5%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N +D A M+ P+ V + LL + + K + +M
Sbjct: 91 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKM----------KHYSTVLSLSTQMDS 140
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
GI PDV + +I+++ + + + L + + G P T+ ++++ LC G+I +
Sbjct: 141 FGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGE 200
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A L + + G P TY + + A++L R M + + C PN+ YN +I
Sbjct: 201 ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN-CRPNVIAYNTII 259
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
++ +++ + + D+ +Y LIH LC +WK EM+ ++
Sbjct: 260 DSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 319
Query: 258 PQKVTFETLYRGLIQSDMLRTWR-----RLKKKLDEESITFGS 295
P V F T+ L + M+ +K+ ++ + +T+ +
Sbjct: 320 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 362
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 143/287 (49%), Gaps = 17/287 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +LI +CK+ RID A L M +G++PN+++YNV++NG+CR S+
Sbjct: 42 LPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSM----- 96
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++ +EM +G PD +++ +L+ Y + +L M G+ P+V
Sbjct: 97 -----KEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVV 151
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ +C + A E +M G+ P+ TY + + N A ++ +M
Sbjct: 152 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 211
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E P++ TYN I L RM+ + + L D+ SY+ +I G C K +
Sbjct: 212 TESGFS-PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 270
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
A Q EM+EKG+ P VT+ +L +GL + RRL + D
Sbjct: 271 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCE------MRRLTEACD 311
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 137/291 (47%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y LI G+C + + GEM G PNVVTYN L++ C+
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR------- 60
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + M +G++P++ S++++++ R + + + L M KG P T
Sbjct: 61 ---IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVT 117
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C G A + EMVRNGVSPS TY ++ N AM+ + QM+
Sbjct: 118 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 177
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L PN TY LI F ++ I N + S + +Y IHG C ++
Sbjct: 178 IRGL-RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 236
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+EA EM+EKGL P V++ T+ G + L ++K+++ E+ ++
Sbjct: 237 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 287
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 12/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +L+ G+CK A EM+ GV P+VVTY L+N +C+ +L+
Sbjct: 113 PDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN----- 167
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + FD+MR+RG+ P+ +++ ++ +SR + LN M E G P+V T
Sbjct: 168 -----RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVT 222
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + + C R+E+A ++ EMV G++P +Y+ + + + + A ++ ++M
Sbjct: 223 YNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV 282
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + P+ TY+ LI + R+ ++ + L D +YT LI+ C +
Sbjct: 283 EKGVS-PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDL 341
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD-EESI 291
+A EMI KG LP VT+ L GL + R +RL KL EES+
Sbjct: 342 NKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV 392
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 131/286 (45%), Gaps = 32/286 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + YT+LI G+ + ++ A R L EM E G P+VVTYN ++G C ER
Sbjct: 183 PNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL------ERM 236
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + V EM +G+ PDV S+S ++ + R + + M EKG+ P T
Sbjct: 237 EEAL----GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVT 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S+++ LC R+ +A +L EM+ G+ P TY Y D N A+ L+ +M
Sbjct: 293 YSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMI 352
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVRE--------IWNHVKGSELGLD--------- 224
+P+ TY++LI LN+ RE I+ S++ D
Sbjct: 353 HKGF-LPDAVTYSVLIN---GLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNI 408
Query: 225 -LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
S LI G C K EA + F M+E+ P + + + G
Sbjct: 409 EFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHG 454
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 1/213 (0%)
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
+ P+V +++I++ + + Q L M+ G P V TY +++ C GRI++A
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
LL M G+ P+ +YN A ++ +M P+ TYN L+
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGF-TPDEVTYNTLLNG 124
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ I + + + + +YT LI+ +C+ + A ++F +M +GL P
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ T+ TL G + +L R+ ++ E +
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 217
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 40/187 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
P+ YT+LI +C ++ A EMI +G P+ VTY+VL+NG+ ++A
Sbjct: 323 PDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 382
Query: 54 --------SLHPNERFEKTIRN------------------------AEKVFDEMRVRGIE 81
S+ + ++ I N A++VF+ M R +
Sbjct: 383 LFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHK 442
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
P +++++H + R + + M G P T +++K L G E+ E+
Sbjct: 443 PGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEV 502
Query: 142 LGEMVRN 148
+G+ +R+
Sbjct: 503 IGDTLRS 509
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 143/276 (51%), Gaps = 12/276 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNER 60
PN Y +L+ +C+ +D AER + M E G +PN+VT+N ++NG+C+ +
Sbjct: 185 PNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRM----- 239
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVFDEM G+ PDV S++ +L Y + SL + M ++G+ P V
Sbjct: 240 -----EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+TS++ C G +E A L+ +M G+ + T+ + + + A+ +M
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + P++ YN LI + L RMD+ RE+ ++ + D+ +Y+ +I G C+
Sbjct: 355 RKCGI-QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 413
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
A Q +M++KG+LP +T+ +L RGL + L
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 50/325 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + S++ G CK R++ A + EM+ G+ P+VV+YN LL+G C+ LH
Sbjct: 221 PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH----- 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ VF EM RG+ PDV +F+ ++H +A + ++ + M+E+G+ T
Sbjct: 276 -----ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 330
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYRQ 179
+T+++ C G ++DA + EM + G+ PS YN Y GR D A +L R+
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL--ARELIRE 388
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E P++ TY+ +I + + +D ++ + + D +Y+ LI GLCE++
Sbjct: 389 M-EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 447
Query: 240 KWKEACQYFV-----------------------------------EMIEKGLLPQKVTFE 264
+ +AC+ F EMI KG+LP VT+
Sbjct: 448 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 507
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDEE 289
L GL +S + RL KL E
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHE 532
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 144/305 (47%), Gaps = 18/305 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ + + A RFL M+ GV PNV TYN+L+ +C R R
Sbjct: 116 PSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARG------RL 168
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVA 120
E+ + V +MR G P+ +++ ++ + RA + + ++ M+E+G P +
Sbjct: 169 EEAV----GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLV 224
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ S+V LC GR+E A ++ EMVR G++P +YN Y + ++ ++ +M
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L VP++ T+ LI ++ + ++ L ++ ++T LI G C+K
Sbjct: 285 TQRGL-VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
+A EM + G+ P V + L G + + R L K++ + +T+ +
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 296 EFQNY 300
Y
Sbjct: 404 IISGY 408
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 24/289 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G+CK+ R+D+A + EM + V+P+VVTY+ +++G C+ +L
Sbjct: 361 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLD----- 415
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ +M +G+ PD ++S ++ + + + M + G+ P T
Sbjct: 416 -----SAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKDANGAMKLY 177
YT+++ C G +E A L EM+R GV P TY N K R ++ KLY
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY 530
Query: 178 RQMKEDD--------LCVPNIHTYNI--LIGMFMALNRMDMVREIWNHVKGSELGLDLDS 227
+ D LC ++ L+ F M +++ + LD
Sbjct: 531 HEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV 590
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
Y++LIHG C ++A + +M+ G P + +L RGL + M+
Sbjct: 591 YSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMV 639
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 1/213 (0%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G P V +++ VL S A P + L+ M G+ P V TY +V+ LC+ GR+E+A
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
++G+M G +P+A TYN + + +GA ++ M+E+ PN+ T+N ++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
RM+ R++++ + L D+ SY L+ G C+ E+ F EM ++GL+P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 259 QKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
VTF +L ++ L L ++ E +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 40/185 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+LI G CK ++ A EMI +GV P+VVTY+VL+NG+ + A R
Sbjct: 466 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525
Query: 62 ----------------------------------------EKTIRNAEKVFDEMRVRGIE 81
+ ++ A+KV+ M R +
Sbjct: 526 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 585
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
D + +SI++H + R + +L M G P + S+V+ L G + +A+
Sbjct: 586 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNA 645
Query: 142 LGEMV 146
+ +++
Sbjct: 646 IQDLL 650
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 141/290 (48%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +L+ G CK+ A R L M+++ PNV+ YN +++ +C+
Sbjct: 253 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK---------- 302
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A +F EM +GI PD+ +++ ++H + + LN M I P V
Sbjct: 303 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 362
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++VV LC G I A +++ M++ GV P TY + R + + A+K++ M
Sbjct: 363 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 422
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
CVPN+ +YNILI + + RMD + + L D +Y LIHGLC +
Sbjct: 423 HKG-CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRL 481
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ A F EM+ G +P VT+ L L ++ L L K ++ ++
Sbjct: 482 QHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 531
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 140/274 (51%), Gaps = 11/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV ++++++ CK I +A + MI+RGVEP+VVTY L++G C R+ +
Sbjct: 357 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMD---- 412
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVFD M +G P+V S++I+++ Y + + ++ L M +G+
Sbjct: 413 ------EAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTV 466
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC GR++ A L EMV +G P TY AM L + +
Sbjct: 467 TYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAI 526
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +L +I YNI I ++ R++++++ L D+ +Y ++IHGLC++
Sbjct: 527 EGSNL-DADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGL 585
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA + F +M E G + T+ RG ++S+
Sbjct: 586 LDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSN 619
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 121/271 (44%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V LI +C + R+ A L ++++ G +P+ T+N L+ G+C
Sbjct: 183 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLC----------V 232
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A +FD+ G +PDV ++ +++ + ++ L M +K P V
Sbjct: 233 EGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIA 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC ++ +A L EM+ G+SP TYN + L +M
Sbjct: 293 YNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 352
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PN+ ++ ++ + + ++ + + + D+ +YT L+ G C + +
Sbjct: 353 NSKI-MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM 411
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA + F M+ KG +P ++ L G Q
Sbjct: 412 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQ 442
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 11/259 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N +D A M+ P+ V + LL + + K + +M
Sbjct: 129 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKM----------KHYSTVLSLSTQMDS 178
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
GI PDV + +I+++ + + + L + + G P T+ ++++ LC G+I +
Sbjct: 179 FGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGE 238
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A L + + G P TY + + A++L R M + + C PN+ YN +I
Sbjct: 239 ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN-CRPNVIAYNTII 297
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
++ +++ + + D+ +Y LIH LC +WK EM+ ++
Sbjct: 298 DSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 357
Query: 258 PQKVTFETLYRGLIQSDML 276
P V F T+ L + M+
Sbjct: 358 PNVVVFSTVVDALCKEGMI 376
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 46/235 (19%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV+ Y LI G+C+I R+D A L +M +G+ + VTYN L++G+C L
Sbjct: 427 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRL----- 481
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH---------------------------- 92
++A +F EM G PD+ ++ I+L
Sbjct: 482 -----QHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADIL 536
Query: 93 VYS-------RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
VY+ RA + + + D + + KG+ P V TY ++ LC G +++A +L +M
Sbjct: 537 VYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 596
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
NG S YN + + + GA +L ++M + ++ T +++ M
Sbjct: 597 DENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSA-DVSTTTLIVEML 650
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 142/272 (52%), Gaps = 12/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNER 60
PN Y +L+ +C+ +D AER + M E G +PN+VT+N ++NG+C+ +
Sbjct: 185 PNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRME---- 240
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVFDEM G+ PDV S++ +L Y + SL + M ++G+ P V
Sbjct: 241 ------GARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+TS++ C G +E A L+ +M G+ + T+ + + + A+ +M
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + P++ YN LI + L RMD+ RE+ ++ + D+ +Y+ +I G C+
Sbjct: 355 RKCGI-QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 413
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
A Q +M++KG+LP +T+ +L RGL +
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 445
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 50/325 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + S++ G CK R++ A + EM+ G+ P+VV+YN LL+G C+ LH
Sbjct: 221 PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH----- 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ VF EM RG+ PDV +F+ ++H +A + ++ + M+E+G+ T
Sbjct: 276 -----ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 330
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYRQ 179
+T+++ C G ++DA + EM + G+ PS YN Y GR D A +L R+
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL--ARELIRE 388
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E P++ TY+ +I + + +D ++ + + D +Y+ LI GLCE++
Sbjct: 389 M-EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 447
Query: 240 KWKEACQYFV-----------------------------------EMIEKGLLPQKVTFE 264
+ +AC+ F EMI KG+LP VT+
Sbjct: 448 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 507
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDEE 289
L GL +S + RL KL E
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHE 532
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 144/305 (47%), Gaps = 18/305 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ + + A RFL M+ GV PNV TYN+L+ +C R R
Sbjct: 116 PSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARG------RL 168
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVA 120
E+ + V +MR G P+ +++ ++ + RA + + ++ M+E+G P +
Sbjct: 169 EEAV----GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLV 224
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ S+V LC GR+E A ++ EMVR G++P +YN Y + ++ ++ +M
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L VP++ T+ LI ++ + ++ L ++ ++T LI G C+K
Sbjct: 285 TQRGL-VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
+A EM + G+ P V + L G + + R L K++ + +T+ +
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 296 EFQNY 300
Y
Sbjct: 404 IISGY 408
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 24/289 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G+CK+ R+D+A + EM + V+P+VVTY+ +++G C+ +L
Sbjct: 361 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLD----- 415
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ +M +G+ PD ++S ++ + + + M + G+ P T
Sbjct: 416 -----SAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKDANGAMKLY 177
YT+++ C G +E A L EM+R GV P TY N K R ++ KLY
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY 530
Query: 178 RQMKEDD--------LCVPNIHTYNI--LIGMFMALNRMDMVREIWNHVKGSELGLDLDS 227
+ D LC ++ L+ F M +++ + LD
Sbjct: 531 HEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV 590
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
Y++LIHG C ++A + +M+ G P + +L RGL + M+
Sbjct: 591 YSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMV 639
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 1/213 (0%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G P V +++ VL S A P + L+ M G+ P V TY +V+ LC+ GR+E+A
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
++G+M G +P+A TYN + + +GA ++ M+E+ PN+ T+N ++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
RM+ R++++ + L D+ SY L+ G C+ E+ F EM ++GL+P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 259 QKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
VTF +L ++ L L ++ E +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 87/224 (38%), Gaps = 40/224 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+LI G CK ++ A EMI +GV P+VVTY+VL+NG+ + A R
Sbjct: 466 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525
Query: 62 ----------------------------------------EKTIRNAEKVFDEMRVRGIE 81
+ ++ A+KV+ M R +
Sbjct: 526 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 585
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
D + +SI++H + R + +L M G P + S+V+ L G + +A+
Sbjct: 586 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNA 645
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ +++ AE R + + + + M D L
Sbjct: 646 IQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGL 689
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 145/274 (52%), Gaps = 11/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV ++T+L+ CK + +A + MI+RGVEP+VVTY L++G C R+ +
Sbjct: 281 MPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMD---- 336
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A+KVFD M +G P+V S+S +++ Y + + ++ M ++ + P +
Sbjct: 337 ------EADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIV 390
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC GR+ DA L EMV +G P TY + + AM + + +
Sbjct: 391 TYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAI 450
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +L P+I +YNI+I + ++ ++++ + L D+ +YT++I+GLC +
Sbjct: 451 EGSNL-APDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGL 509
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA + F EM G P T+ + RG ++++
Sbjct: 510 LAEATKLFREMNTDGCSPDDCTYNLITRGFLRNN 543
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 149/301 (49%), Gaps = 13/301 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +LI+G CK+ A R L M+++ EPNV+TYN +++ + +
Sbjct: 177 PNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFK---------- 226
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A +F EM +GI P+V++++ ++H + + + +N M + I P V
Sbjct: 227 DRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVI 286
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T++V LC G + A +++ M++ GV P TY + R + + A K++ M
Sbjct: 287 FTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMV 346
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN+ +Y+ LI + + R+D ++ + EL ++ +Y LIHGLC +
Sbjct: 347 RKG-CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRL 405
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
++A F EM+ G +P VT+ L L ++ L + K + E + Q+Y+
Sbjct: 406 RDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAI--EGSNLAPDIQSYN 463
Query: 302 F 302
Sbjct: 464 I 464
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 14/252 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y++LI G+CKI RID A EM +R + PN+VTYN L++G+C L
Sbjct: 352 PNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRL------ 405
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R+A +F EM G PD+ ++ I+L + ++ L ++ + P + +
Sbjct: 406 ----RDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQS 461
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V+ +C G +E A +L + G+ P TY + A KL+R+M
Sbjct: 462 YNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMN 521
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE---K 238
D C P+ TYN++ F+ N ++ + G D + T+++ L +
Sbjct: 522 TDG-CSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLD 580
Query: 239 QKWKEACQYFVE 250
Q K+ FV+
Sbjct: 581 QSVKQILHEFVQ 592
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 132/302 (43%), Gaps = 44/302 (14%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
+I +C +NR+D L ++ + G +P+ T+ L+ G+C E I A
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLC----------VEGKIGEAL 164
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+FD+M G +P+ ++ ++H + + ++ L M +K P V TY +++ CL
Sbjct: 165 HLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCL 224
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYN------CFFKEYRGRKDANGAMKLYRQMKE- 182
++ +A + EM+ G+SP+ TYN C F E++ M + M
Sbjct: 225 FKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNV 284
Query: 183 -------DDLCV--------------------PNIHTYNILIGMFMALNRMDMVREIWNH 215
D LC P++ TY L+ + MD ++++
Sbjct: 285 VIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDT 344
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ ++ SY+ LI+G C+ Q+ +A F EM ++ L+P VT+ TL GL
Sbjct: 345 MVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGR 404
Query: 276 LR 277
LR
Sbjct: 405 LR 406
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 11/259 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N ID A M+ P+VV + +L + N + T+ + K D +
Sbjct: 53 NTIDEALSSFNRMLHMQPPPSVVDFAKILTSI-------ANMKHYSTVLSLSKQMDSL-- 103
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
GI DV + +IV++ + ++ L + + G P AT+T++++ LC G+I +
Sbjct: 104 -GIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGE 162
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A L +MV G P+ TY ++ A++L R M + + C PN+ TYN +I
Sbjct: 163 ALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKN-CEPNVITYNTII 221
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
+++ I++ + + ++ +Y +IHGLC+ +WK EM++ ++
Sbjct: 222 DCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIM 281
Query: 258 PQKVTFETLYRGLIQSDML 276
P V F TL L + M+
Sbjct: 282 PNVVIFTTLVDALCKEGMV 300
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 148/286 (51%), Gaps = 13/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YTSL++GWC+ I AER GEM G+ PNV TY+++++ +CR
Sbjct: 1280 PDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQ------- 1332
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A VF EM G +P+ +F+ ++ V+ +A + + L N MK G P T
Sbjct: 1333 ---ITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAIT 1389
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +E+A ++L V+ G + +A ++N F D N A +++ +MK
Sbjct: 1390 YNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMK 1448
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C PN TYNIL+ MF DMV ++ + +E+ + ++Y +LI C W
Sbjct: 1449 -DLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHW 1507
Query: 242 KEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A +F EMI EK L P +E + + L ++ L+ L +K+
Sbjct: 1508 NNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKM 1553
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 13/288 (4%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
V+ +T L+ + K A M + G +P+ + ++V+++ + ++ +
Sbjct: 1213 VETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKK----------R 1262
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
A+ FD ++ R EPDV ++ ++H + RA + MK GI P V TY+
Sbjct: 1263 RAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYS 1321
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
V+ LC G+I A ++ EM+ G P+A T+N + + +++Y QMK
Sbjct: 1322 IVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRL 1381
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
C P+ TYN LI + ++ +I N VK L+ S+ + + +
Sbjct: 1382 G-CPPDAITYNFLIESHCRDDNLEEAVKILNSVKKG-CNLNASSFNPIFGCISKLGDVNS 1439
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + F +M + P VT+ L R +L+K++DE I
Sbjct: 1440 AHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEI 1487
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 17/254 (6%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKV--FD 73
K+ + D+A + + M R VE V T+ +L+ R+ K AE V F+
Sbjct: 1190 KVRQFDLAWQLIDLMKTRNVEIPVETFTILV------------RRYVKAGLAAEAVHAFN 1237
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
M G +PD +FS+V+ S+ + + + +K++ P V YTS+V C G
Sbjct: 1238 RMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAG 1296
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
I +AE + GEM G+ P+ TY+ A ++ +M D C PN T+
Sbjct: 1297 NISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMI-DVGCDPNAITF 1355
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N L+ + + R + V +++N +K D +Y LI C +EA + + ++
Sbjct: 1356 NNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVK-ILNSVK 1414
Query: 254 KGLLPQKVTFETLY 267
KG +F ++
Sbjct: 1415 KGCNLNASSFNPIF 1428
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75
K+ ++ A R +M + PN VTYN+L+ + K+ K+ EM
Sbjct: 1433 KLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADK----------KSTDMVLKLRKEM 1482
Query: 76 RVRGIEPDVTSFSIVLHVY-SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
IEP+ ++ +++ + H ++EK + P++ Y V++ L G+
Sbjct: 1483 DENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQ 1542
Query: 135 IEDAEELLGEMVRNG 149
++ EEL+ +MV G
Sbjct: 1543 LKKHEELVEKMVNRG 1557
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 143/276 (51%), Gaps = 12/276 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNER 60
PN Y +L+ +C+ +D AER + M E G +PN+VT+N ++NG+C+ +
Sbjct: 43 PNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRME---- 98
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVFDEM G+ PDV S++ +L Y + SL + M ++G+ P V
Sbjct: 99 ------GARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 152
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+TS++ C G +E A L+ +M G+ + T+ + + + A+ +M
Sbjct: 153 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 212
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + P++ YN LI + L RMD+ RE+ ++ + D+ +Y+ +I G C+
Sbjct: 213 RKCGI-QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 271
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
A Q +M++KG+LP +T+ +L RGL + L
Sbjct: 272 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 307
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 50/325 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + S++ G CK R++ A + EM+ G+ P+VV+YN LL+G C+ LH
Sbjct: 79 PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH----- 133
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ VF EM RG+ PDV +F+ ++H +A + ++ + M+E+G+ T
Sbjct: 134 -----ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 188
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYRQ 179
+T+++ C G ++DA + EM + G+ PS YN Y GR D A +L R+
Sbjct: 189 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL--ARELIRE 246
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E P++ TY+ +I + + +D ++ + + D +Y+ LI GLCE++
Sbjct: 247 M-EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 305
Query: 240 KWKEACQYFV-----------------------------------EMIEKGLLPQKVTFE 264
+ +AC+ F EMI KG+LP VT+
Sbjct: 306 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 365
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDEE 289
L GL +S + RL KL E
Sbjct: 366 VLINGLSKSARTKEAHRLLFKLYHE 390
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 24/289 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G+CK+ R+D+A + EM + V+P+VVTY+ +++G C+ +L
Sbjct: 219 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLD----- 273
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ +M +G+ PD ++S ++ + + + M + G+ P T
Sbjct: 274 -----SAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 328
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKDANGAMKLY 177
YT+++ C G +E A L EM+R GV P TY N K R ++ KLY
Sbjct: 329 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY 388
Query: 178 RQMKEDD--------LCVPNIHTYNI--LIGMFMALNRMDMVREIWNHVKGSELGLDLDS 227
+ D LC ++ L+ F M +++ + LD
Sbjct: 389 HEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV 448
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
Y++LIHG C ++A + +M+ G P + +L RGL + M+
Sbjct: 449 YSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMV 497
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 131/277 (47%), Gaps = 17/277 (6%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M+ GV PNV TYN+L+ +C R R E+ + V +MR G P+ +++
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARG------RLEEAV----GVVGDMRGAGCAPNAVTYNT 50
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
++ + RA + + ++ M+E+G P + T+ S+V LC GR+E A ++ EMVR
Sbjct: 51 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 110
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G++P +YN Y + ++ ++ +M + L VP++ T+ LI ++
Sbjct: 111 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL-VPDVVTFTSLIHATCKAGNLEQ 169
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+ ++ L ++ ++T LI G C+K +A EM + G+ P V + L
Sbjct: 170 AVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALIN 229
Query: 269 GLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNY 300
G + + R L K++ + +T+ + Y
Sbjct: 230 GYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 266
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 87/224 (38%), Gaps = 40/224 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+LI G CK ++ A EMI +GV P+VVTY+VL+NG+ + A R
Sbjct: 324 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 383
Query: 62 ----------------------------------------EKTIRNAEKVFDEMRVRGIE 81
+ ++ A+KV+ M R +
Sbjct: 384 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 443
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
D + +SI++H + R + +L M G P + S+V+ L G + +A+
Sbjct: 444 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNA 503
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ +++ AE R + + + + M D L
Sbjct: 504 IQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGL 547
>gi|413934769|gb|AFW69320.1| hypothetical protein ZEAMMB73_542469 [Zea mays]
Length = 539
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 148/283 (52%), Gaps = 15/283 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RRASLHPNE 59
P+V++Y L+ GW + R+D AE+ M + GV P VVTY ++ C RR
Sbjct: 181 PDVRIYNILLNGWSRARRLDKAEKLWAAMRDEGVRPTVVTYGTFIDAHCVMRRPD----- 235
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+A + D+MR GIE ++ + + +++ + A + + L G+ P +
Sbjct: 236 -------HAMALLDQMREEGIEANLLTCNPIVYALAHAGRFGDAHKVLEKFPLYGVAPNI 288
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+T+ S+V C G + A +L M+ G+SP+A TYN FF + + M LY +
Sbjct: 289 STFNSLVFGYCRHGDLAGASRVLKAMLGRGISPTARTYNYFFTVFARNLSIDLGMNLYVK 348
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + P+ TY++LI M NR+++ ++ ++ S DL + TMLIH LC +
Sbjct: 349 MVSNGYA-PDRLTYHLLIKMLCEANRLELTLQMLQEMRNSGFEPDLATSTMLIHLLCRRH 407
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+++EA F +M E+G++PQ +T+ L R L + +++ ++L
Sbjct: 408 QFEEAFAEFEQMFERGMVPQYITYRMLMRELKRLGLVKLVQKL 450
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 82/204 (40%), Gaps = 6/204 (2%)
Query: 109 FMKEKGICPTVATYTSVV---KCLCSCGRIEDAEELLGEMVR--NGVSPSAETYNCFFKE 163
+ E + P+ + ++ LC G A L+ ++ R +G +P YN
Sbjct: 133 YAVESDVTPSAEALSPLILTIDALCKEGHPRAAALLVAQIRREDDGWAPDVRIYNILLNG 192
Query: 164 YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223
+ + + A KL+ M+ D+ P + TY I + R D + + ++ +
Sbjct: 193 WSRARRLDKAEKLWAAMR-DEGVRPTVVTYGTFIDAHCVMRRPDHAMALLDQMREEGIEA 251
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
+L + +++ L ++ +A + + G+ P TF +L G + L R+
Sbjct: 252 NLLTCNPIVYALAHAGRFGDAHKVLEKFPLYGVAPNISTFNSLVFGYCRHGDLAGASRVL 311
Query: 284 KKLDEESITFGSEFQNYHFKPYRR 307
K + I+ + NY F + R
Sbjct: 312 KAMLGRGISPTARTYNYFFTVFAR 335
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 142/259 (54%), Gaps = 12/259 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ YT L+ GWC++ + A R EM++ G +P++VT+N++L G+ R
Sbjct: 241 PNLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLR---------- 290
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K +A K F+ M+ +G PDV S++I++ + K + ++ M + G P A
Sbjct: 291 SKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAV 350
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + R++ ELL EM G P +TYN K ++ + A+++Y++M
Sbjct: 351 YTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMI 410
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + P+IH+YN+++ + + +M +W+ + D +SYT+ I GL + +
Sbjct: 411 QNGI-EPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRS 469
Query: 242 KEACQYFVEMIEKGL-LPQ 259
+EAC+Y EMIEKG+ PQ
Sbjct: 470 EEACKYLEEMIEKGMKAPQ 488
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 10/180 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YT L+ G+ R+DM L EM E+G P+ TYN L+ L ++R
Sbjct: 346 PDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIK-------LMTSQRM 398
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A +++ +M GIEP + S+++++ Y R ++ + M +KG CP +
Sbjct: 399 PD---DAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNS 455
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT + L S GR E+A + L EM+ G+ YN F ++ + +L ++MK
Sbjct: 456 YTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELAQKMK 515
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 47/237 (19%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82
A+ G+ +E PN+ TY VLLNG CR K + A ++++EM G +P
Sbjct: 228 AQALFGK-LEGRFTPNLRTYTVLLNGWCRV----------KNLMEAGRIWNEMLDEGFKP 276
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
D+ + +I+L R+ K ++ MK KG P V +YT +++ LC ++++A
Sbjct: 277 DIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYF 336
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
EMV +G C P+ Y L+ +
Sbjct: 337 YEMVDSG------------------------------------CHPDAAVYTCLMTGYGN 360
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
RMDMV E+ +K D +Y LI + ++ +A + + +MI+ G+ P
Sbjct: 361 HKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPS 417
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 11/218 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ YT LI CK ++ A + EM++ G P+ Y L+ G
Sbjct: 311 PDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGN---------- 360
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + ++ EM+ +G PD +++ ++ + + P ++ M + GI P++ +
Sbjct: 361 HKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHS 420
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++K E + EM + G P +Y F + + A K +M
Sbjct: 421 YNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMI 480
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
E + P + YN F + D++ E+ +K S
Sbjct: 481 EKGMKAPQL-DYNKFAADFSRAGKPDILEELAQKMKFS 517
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
Query: 84 VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLG 143
+ +FSI + ++ A + + ++ MK V T +++ L ++A+ L G
Sbjct: 174 LDTFSIAMRAFAAAKERKKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFG 233
Query: 144 EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMA 202
++ +P+ TY + K+ A +++ +M ++ P+I T+NI++ G+ +
Sbjct: 234 KL-EGRFTPNLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGF-KPDIVTHNIMLEGLLRS 291
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
R D ++ + +K D+ SYT+LI LC++ K KEA YF EM++ G P
Sbjct: 292 KKRSDAIK-FFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAV 350
Query: 263 FETLYRG 269
+ L G
Sbjct: 351 YTCLMTG 357
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 141/273 (51%), Gaps = 12/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SL++G CK ++D A L M G PN+VTYN +++G C+
Sbjct: 981 PNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR------- 1033
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + +EM G +P+V +++++L + + K + ++ + M EKG P + T
Sbjct: 1034 ---IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFT 1090
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C +E A +LL M++ G P+ +YN + + L QM
Sbjct: 1091 YNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 1150
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ CVP+I T+N +I R+D+ E++N ++ S +L +Y L+HGLC+ +++
Sbjct: 1151 SNN-CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRF 1209
Query: 242 KEACQYFVEMIEK-GLLPQKVTFETLYRGLIQS 273
+A EM K G P +T+ T+ GL +S
Sbjct: 1210 DQAEYLLREMTRKQGCSPDIITYNTVIDGLCKS 1242
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 140/286 (48%), Gaps = 46/286 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+ LI+ CK R+ AE +L M++ P+VVTYN +++G+C+
Sbjct: 473 PDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCK---------- 522
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I +A +FD MR G+ PDV ++SIV+H + + + + L MKE P V T
Sbjct: 523 SRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVT 582
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ LC G ++ A ++ EM+ G
Sbjct: 583 YSALINGLCKAGTVDKAFDVFQEMLGCG-------------------------------- 610
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN+ TYN LI +N+++ E+ ++ D +YT LI+GLC +
Sbjct: 611 ----CAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRL 666
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+EA + EM +KG LP ++T+ TL R L +++ L +L K+++
Sbjct: 667 EEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 144/299 (48%), Gaps = 16/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y+++I G+CK ++ A L +MI RG P+V + L++ +C+ A+
Sbjct: 403 PDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAA------- 455
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I +A+++ PDV ++SI++H +A + + L+ M + P V T
Sbjct: 456 ---IDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVT 512
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y SVV LC RI DA L M GV P TY+ + + + A K+ +MK
Sbjct: 513 YNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMK 572
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E CVP++ TY+ LI +D +++ + G +L +Y LI GLC+ K
Sbjct: 573 EAK-CVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKV 631
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKKKLDE----ESITFGS 295
++A + M ++ P +T+ L GL + L WR L++ D+ + +T+G+
Sbjct: 632 EQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGT 690
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 140/287 (48%), Gaps = 11/287 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G CK++++D A R + +MI+RG +PNV+TY L++G CR L
Sbjct: 298 PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD----- 352
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ +M RG P+ +++ ++HV+ R + + + L M + G P
Sbjct: 353 -----GAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAIN 407
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C G++ +A +LL +M+R G P + + A +L R
Sbjct: 408 YSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSI 467
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C P++ Y+ILI R+ + + + D+ +Y ++ GLC+ ++
Sbjct: 468 GMD-CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRI 526
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+A F M G++P VT+ + + + L + ++ +++ E
Sbjct: 527 NDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKE 573
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 148/314 (47%), Gaps = 35/314 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y ++I G CK+ RID A L EM++ G +PNVVTY VLL+ C+
Sbjct: 1016 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK------- 1068
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A + + M +G P++ +++ +L ++ + + + + L+ M +KG P V +
Sbjct: 1069 ---AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 1125
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V+ LC ++ + LL +M+ N P T+N + A +L+ ++
Sbjct: 1126 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 1185
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMD----MVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
E C PN+ TYN L+ R D ++RE+ S D+ +Y +I GLC+
Sbjct: 1186 ESG-CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP---DIITYNTVIDGLCK 1241
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR-----------RLKKKL 286
++ A + F++M+ GL P VT+ + L + WR LK
Sbjct: 1242 SKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK------WRFMDEANNVLELMLKNGF 1295
Query: 287 DEESITFGSEFQNY 300
D +IT+G+ +
Sbjct: 1296 DPGAITYGTLIDGF 1309
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 148/324 (45%), Gaps = 35/324 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
PNV Y +L+ G+C++ +D A + +M ERG PN +TYN +++ CRR +
Sbjct: 333 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQV 392
Query: 57 ----------PNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P+ TI R A + ++M RG PDV S ++ +
Sbjct: 393 LQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCK 452
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + L P V Y+ ++ LC R+ +AE L MV+N P T
Sbjct: 453 AAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVT 512
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + N A L+ +M+ + +P++ TY+I+I F N +D ++ +
Sbjct: 513 YNSVVDGLCKSRRINDAFLLFDRMRAAGV-MPDVVTYSIVIHSFCKDNNLDSAFKMLERM 571
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ---- 272
K ++ D+ +Y+ LI+GLC+ +A F EM+ G P VT+ TL GL +
Sbjct: 572 KEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKV 631
Query: 273 ---SDMLRTWRRLKKKLDEESITF 293
++ML R K+ +SIT+
Sbjct: 632 EQAAEMLEIMR--KQSCTPDSITY 653
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 134/273 (49%), Gaps = 12/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ +T LI+G C+ I A L EM GV NV+ +NV++ G+C
Sbjct: 875 PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCS---------- 924
Query: 62 EKTIRNAEKVFDEMRVRG-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + +A ++F EM G PDV ++S ++ ++ K + + M KG P V
Sbjct: 925 ARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVV 984
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+S++ LC G++++A LL M R+G SP+ TYN + + A L +M
Sbjct: 985 TYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEM 1044
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D C PN+ TY +L+ F + + + + +L +Y L+ C+K +
Sbjct: 1045 V-DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDE 1103
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ ACQ MI+KG +P V++ T+ GL ++
Sbjct: 1104 VERACQLLSSMIQKGCVPNVVSYNTVIAGLCKA 1136
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 17/306 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y SL+ +CK + ++ A + L MI++G PNVV+YN ++ G+C+ +H
Sbjct: 1085 VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH---- 1140
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ ++M PD+ +F+ ++ + ++ ++ + N ++E G P +
Sbjct: 1141 ------EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 1194
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVR-NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY S+V LC R + AE LL EM R G SP TYN K + A KL+ Q
Sbjct: 1195 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQ 1254
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M D L P+ TY+I+I MD + + + +Y LI G C+
Sbjct: 1255 MLSDGL-APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTG 1313
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFG 294
+A + ++ KG P VTF L + LR L+ L +++T+
Sbjct: 1314 NLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYN 1373
Query: 295 SEFQNY 300
+ + +
Sbjct: 1374 TLLKGF 1379
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 133/272 (48%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++++G+CK NR++ A L +M+ RG P+VV+Y ++NG+C+
Sbjct: 263 PNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKL--------- 313
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +V D+M RG +P+V ++ ++ + R +++ + M E+G P T
Sbjct: 314 -DQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAIT 372
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +E A ++L M++ G P A Y+ + A L QM
Sbjct: 373 YNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMI 432
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P++ + LI +D +E+ G + D+ +Y++LIH LC+ ++
Sbjct: 433 RRG-CRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRL 491
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA + M++ P VT+ ++ GL +S
Sbjct: 492 PEAESWLDVMVKNRCYPDVVTYNSVVDGLCKS 523
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 137/277 (49%), Gaps = 12/277 (4%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
++ S++ G C + A EM + P+ VTYN ++NG L ++R + I
Sbjct: 198 VHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMING------LSKSDRLDDAI 250
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
R + +EM G P+V S++ VLH + +A++ + +L L M +G P V +YT+V
Sbjct: 251 R----LLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTV 306
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ LC ++++A ++ +M++ G P+ TY + D +GA++L R+M E
Sbjct: 307 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 366
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
PN TYN ++ +F N M+ ++ + + D +Y+ +I G C+ K +EA
Sbjct: 367 -RPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAH 425
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+MI +G P TL L ++ + + + L
Sbjct: 426 DLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQEL 462
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 33/226 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMI-ERGVEPNVVTYNVLLNGVCR-----RA-- 53
PN+ Y SL++G CK R D AE L EM ++G P+++TYN +++G+C+ RA
Sbjct: 1191 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 1250
Query: 54 --------SLHPNE-------------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
L P++ RF + A V + M G +P ++ ++
Sbjct: 1251 LFLQMLSDGLAPDDVTYSIVISSLCKWRF---MDEANNVLELMLKNGFDPGAITYGTLID 1307
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+ + +L+ L + KG P V T++ + L GR+ A ELL M+R G+ P
Sbjct: 1308 GFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP 1367
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
TYN K + A+ L+ M++ C P+ TY L+G
Sbjct: 1368 DTVTYNTLLKGFCDASLTEDAVDLFEVMRQCG-CEPDNATYTTLVG 1412
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V Y+ +I+ +CK N +D A + L M E P+VVTY+ L+NG+C+
Sbjct: 542 MPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAG------- 594
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
T+ A VF EM G P++ +++ ++ + +K + + + L M+++ P
Sbjct: 595 ---TVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSI 651
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ LC+ R+E+A +L EM G P TY + + + +L ++M
Sbjct: 652 TYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711
Query: 181 K 181
+
Sbjct: 712 E 712
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 4/192 (2%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVATYTSVVKCLCSCGRIED 137
G D + + +L R +P+ D L + K C P + T+T ++ LC G I
Sbjct: 839 GYNHDTYTCNCLLQALLRLKRPK---DALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGT 895
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A ELL EM R+GV + +N K + + A++L+++M+E C P++ TY+ ++
Sbjct: 896 AYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIV 955
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
+ ++D + + ++ +Y+ L+HGLC+ K EA M G
Sbjct: 956 DSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCS 1015
Query: 258 PQKVTFETLYRG 269
P VT+ T+ G
Sbjct: 1016 PNIVTYNTIIDG 1027
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 99/227 (43%), Gaps = 7/227 (3%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G + ++ + +L+V +AH+ + D E TY++++ G+I A
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
EL EM R G+ A + + + A+ +R+M + C P+ TYN +I
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT--CPPDSVTYNTMIN 238
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
+R+D + + + ++ SY ++HG C+ + + A +M+ +G P
Sbjct: 239 GLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPP 298
Query: 259 QKVTFETLYRGLIQSDMLRTWRRLKKKLDEES-----ITFGSEFQNY 300
V++ T+ GL + D + R+ K+ + IT+G+ +
Sbjct: 299 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 345
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK-LNFMKEKGICPTV 119
F K A ++ M + G+EPD +F +L + A ++D+ ++ ++ G+ P V
Sbjct: 1499 FHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGV 1558
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
++ V+ L G + +AE+L M+ PSA T+NC Y+ D A+++
Sbjct: 1559 DHFSCVIDLLGRLGLVNEAEDL---MLGMPCKPSAATWNCLLSAYKICGDFERALRV 1612
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 4/131 (3%)
Query: 169 DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
D A+ + + D I N L+ + + ++ +++ + G D +Y
Sbjct: 105 DPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTY 164
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKK 284
+ LI G K A + F EM KGL +++ RGL SD + +R + K
Sbjct: 165 STLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK 224
Query: 285 KLDEESITFGS 295
+S+T+ +
Sbjct: 225 TCPPDSVTYNT 235
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 137/259 (52%), Gaps = 12/259 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ YT L+ GWCK+ + A EMI++G +P++V +N++L G+ R
Sbjct: 230 PNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLR---------- 279
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K +A K+F M+ +G PDV S++I++ R K + +++ M + G P A
Sbjct: 280 SKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAV 339
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + R++ +LL EM G P TYN K K + A ++Y++M
Sbjct: 340 YTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMT 399
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P IHTYN+++ + +M R +W+ + D +SYT+LI GL + +
Sbjct: 400 QSGI-EPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRS 458
Query: 242 KEACQYFVEMIEKGL-LPQ 259
EAC+Y EM+EKG+ PQ
Sbjct: 459 GEACKYLEEMLEKGMKAPQ 477
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 100/237 (42%), Gaps = 46/237 (19%)
Query: 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN+ TY VLLNG C+ K + A V++EM +G +PD+ + +I+L R
Sbjct: 230 PNLRTYTVLLNGWCKV----------KNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLR 279
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + ++ MK KG P V +YT +++ LC ++E+A E EM+ +G
Sbjct: 280 SKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSG------- 332
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
C P+ Y LI F RMDMV ++ +
Sbjct: 333 -----------------------------CKPDAAVYTCLITGFGNRKRMDMVYDLLKEM 363
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
K D +Y LI + + +A + + +M + G+ P T+ + + Q+
Sbjct: 364 KEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQT 420
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YT LI G+ R+DM L EM E G P+ +TYN L+ + R
Sbjct: 335 PDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRL--------- 385
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K +A +++ +M GIEP + ++++++ Y + ++ + M KG CP +
Sbjct: 386 -KMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNS 444
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
YT ++ L S GR +A + L EM+ G+ YN F
Sbjct: 445 YTVLIGGLISQGRSGEACKYLEEMLEKGMKAPQLDYNKF 483
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 11/218 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ YT LI C+ ++++ A + EMI+ G +P+ Y L+ G R
Sbjct: 300 PDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNR--------- 350
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + + EM+ G PD +++ ++ + +R P + M + GI PT+ T
Sbjct: 351 -KRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHT 409
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++K E + EM R G P +Y + + A K +M
Sbjct: 410 YNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGEACKYLEEML 469
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
E + P + YN D++ E+ +K S
Sbjct: 470 EKGMKAPQLD-YNKFGADLSRGGNPDILEELAQRLKFS 506
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 119/260 (45%), Gaps = 15/260 (5%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
++G E + TYN ++ + L +FE + + +EM +G+ + +FSI +
Sbjct: 122 KQGFEHDSRTYNSMM------SILAKTRQFETVV----SMLEEMGGKGVLT-MDTFSIAM 170
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
++ A + + ++ MK+ V T ++ L ++A+ L E ++ +
Sbjct: 171 RAFAAAKERKKAVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALF-ENLKGRFT 229
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVR 210
P+ TY + K+ A ++ +M + P+I +NI++ G+ + R D ++
Sbjct: 230 PNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGF-KPDIVAHNIMLEGLLRSKQRSDAIK 288
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ +K D+ SYT+LI LC + K +EA +YF EMI+ G P + L G
Sbjct: 289 -LFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGF 347
Query: 271 IQSDMLRTWRRLKKKLDEES 290
+ L K++ EE
Sbjct: 348 GNRKRMDMVYDLLKEMKEEG 367
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 118/289 (40%), Gaps = 13/289 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ + Y S++ K + + L EM +GV +T + + RA ER
Sbjct: 128 DSRTYNSMMSILAKTRQFETVVSMLEEMGGKGV----LTMDTF--SIAMRAFAAAKER-- 179
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A +F+ M+ + V + + +L RA + + +K + P + TY
Sbjct: 180 ---KKAVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGR-FTPNLRTY 235
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++ C + +A + EM+ G P +N + K + A+KL+ MK
Sbjct: 236 TVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKA 295
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P++ +Y ILI ++M+ E + + S D YT LI G +++
Sbjct: 296 KGPS-PDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMD 354
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM E+G P +T+ L + + + M R+ KK+ + I
Sbjct: 355 MVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGI 403
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 149/290 (51%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G CK+ A R LG M+++ +PNV YN +++ +C+
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCK---------- 213
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A +F EM +GI PD+ +++ ++H + + LN M + I P V +
Sbjct: 214 DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 273
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +VV LC G++ +A +++ +M++ GV P+ TY + + + A+K++ M
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C+PN+ +YN LI + + R+D ++ + EL D +Y+ LIHGLC ++
Sbjct: 334 CKG-CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 392
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++A F EM+ +P VT+ L L ++ L L K ++ ++
Sbjct: 393 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 442
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 137/274 (50%), Gaps = 11/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V + +++ CK ++ A + +MI+RGVEPNVVTY L++G C + +
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMD---- 323
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVFD M +G P+V S++ +++ Y + + ++ M + + P
Sbjct: 324 ------EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTV 377
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY++++ LC R++DA L EMV P+ TY + AM L + +
Sbjct: 378 TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI 437
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +L P+I NI I ++ R++++++ L D+ +Y+++I+GLC +
Sbjct: 438 EGSNL-DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGL 496
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA + F EM E G + T+ RG ++++
Sbjct: 497 LDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 530
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 138/308 (44%), Gaps = 15/308 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SLI+ C + L EM++ + P+VV++N +++ +C+
Sbjct: 234 PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCK---------- 283
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A V D+M RG+EP+V +++ ++ + + ++ + M KG P V +
Sbjct: 284 EGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVIS 343
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C RI+ A L GEM R + P TY+ + A+ L+ +M
Sbjct: 344 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 403
Query: 182 EDDLC--VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
C +PN+ TY IL+ + + ++GS L D+ + I G+C
Sbjct: 404 A---CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG 460
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ + A F + KGL P T+ + GL + +L +L +++DE T N
Sbjct: 461 ELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYN 520
Query: 300 YHFKPYRR 307
+ + R
Sbjct: 521 TITRGFLR 528
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 129/310 (41%), Gaps = 44/310 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ LI +C +NR+ A L ++++ G +P+ T+ L+ G+
Sbjct: 94 PNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGI----------YV 143
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A +FD+M G PDV ++ +++ + ++ L M +K P V
Sbjct: 144 EGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA 203
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC ++ +A L EMV G+SP TYN + L +M
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263
Query: 182 E--------------DDLCV--------------------PNIHTYNILIGMFMALNRMD 207
+ D LC PN+ TY L+ L+ MD
Sbjct: 264 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMD 323
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
++++ + ++ SY LI+G C+ Q+ +A F EM + L+P VT+ TL
Sbjct: 324 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLI 383
Query: 268 RGLIQSDMLR 277
GL + L+
Sbjct: 384 HGLCHVERLQ 393
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 14/253 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV Y +LI G+CKI RID A GEM + + P+ VTY+ L++G+C ER
Sbjct: 338 MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV------ER 391
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ I +F EM P++ ++ I+L + ++ L ++ + P +
Sbjct: 392 LQDAI----ALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 447
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ +C G +E A +L + G+ P TY+ R + A KL+R+M
Sbjct: 448 VNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 507
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE--- 237
E+ C N YN + F+ N ++ + D + T+ + L +
Sbjct: 508 DENG-CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL 566
Query: 238 KQKWKEACQYFVE 250
Q K+ + FV+
Sbjct: 567 DQSLKQILREFVQ 579
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 11/253 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N ID A M+ P+ V +N LL + + + T+ + D
Sbjct: 40 NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKM-------KHHSTLLSLSHQMDSF-- 90
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
GI P++ + I+++ + ++ + L + + G P AT+T++++ + G+I +
Sbjct: 91 -GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGE 149
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A L +M+ G P TY + + A++L M + + C PN+ YN +I
Sbjct: 150 ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN-CQPNVFAYNTII 208
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
++ +++ + + D+ +Y LIH LC +WK EM++ ++
Sbjct: 209 DSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM 268
Query: 258 PQKVTFETLYRGL 270
P V+F T+ L
Sbjct: 269 PDVVSFNTVVDAL 281
>gi|225437663|ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Vitis vinifera]
Length = 526
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 136/262 (51%), Gaps = 14/262 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ + L+ GW + AE F EM E GVEP+VV+YN L++ C+
Sbjct: 229 PDLRTFNILLSGW---KSAEEAEGFFDEMREMGVEPDVVSYNCLIDVYCK---------- 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I A KV D+MR I PDV S++ ++ +P + D L MKE G P VA
Sbjct: 276 GREIERAYKVIDKMRDEQISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVAA 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + ++ C R+ DA+ L+ EMV G+SP+A TYN FF+ + D + LY++MK
Sbjct: 336 YNAAIRNFCIANRLGDADGLMDEMVGKGLSPNATTYNLFFRCFYWSNDLGRSCGLYQRMK 395
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C+PN + L +F +++M E+WN + G + +L LC+ K
Sbjct: 396 KTG-CLPNTQSCMFLTRLFRRQEKVEMALELWNDMVEKGFGSYILVSDVLFDMLCDMGKL 454
Query: 242 KEACQYFVEMIEKGLLPQKVTF 263
E + ++MIEKG P V+F
Sbjct: 455 VEVEKCCLQMIEKGHKPSNVSF 476
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 103/253 (40%), Gaps = 54/253 (21%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E + +N LL +C+ EK++R+A V+ ++ PD+ +F+I+L +
Sbjct: 194 EFDTACFNALLRTLCQ----------EKSMRDARNVYHSLK-HDFRPDLRTFNILLSGWK 242
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
A E+AE EM GV P
Sbjct: 243 SA--------------------------------------EEAEGFFDEMREMGVEPDVV 264
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+YNC Y ++ A K+ +M+++ + P++ +Y +IG + + D R++
Sbjct: 265 SYNCLIDVYCKGREIERAYKVIDKMRDEQIS-PDVISYTSIIGGLGLVGQPDKARDVLKE 323
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-D 274
+K D+ +Y I C + +A EM+ KGL P T+ +R S D
Sbjct: 324 MKEYGCYPDVAAYNAAIRNFCIANRLGDADGLMDEMVGKGLSPNATTYNLFFRCFYWSND 383
Query: 275 MLRT---WRRLKK 284
+ R+ ++R+KK
Sbjct: 384 LGRSCGLYQRMKK 396
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 141/282 (50%), Gaps = 11/282 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +L++GWC+ ++ A + EM E G P+V+TY L+ C
Sbjct: 262 PDESSFNTLVHGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYC----------M 311
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + + +EM +G P+V +++IV+H +A + Q +LD + +K G P +
Sbjct: 312 EKDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASF 371
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ L GR+EDA + EM R G+ P+ +N A A+K+ +M+
Sbjct: 372 YNSIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIFNTMISAACDHSQAENALKILVKME 431
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P+I TY L+ + M ++ + H+ ++ D +Y +L+ LC K
Sbjct: 432 EQS-CKPDIKTYTPLLKLCCKRQWMKILPFLICHMFRKDISPDFSTYILLVTWLCRNGKP 490
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
++C + EM+ KG +P++ TF+ + L + ++ ++++
Sbjct: 491 AQSCLFLEEMVLKGFMPKQETFDLVMEKLDKGNLHSAKKKIQ 532
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 12/251 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
NR A +M + GV + N LL+ +C+ EK+++ A VF E+R
Sbjct: 209 NRWTDAIDAFNKMDQFGVVRDTKAMNALLDTLCK----------EKSVKRARGVFQELR- 257
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
+ PD +SF+ ++H + +A + D + M+E G P+V TYTS+++ C +
Sbjct: 258 GVVPPDESSFNTLVHGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQT 317
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
+L EM G P+ TY A+ ++ ++K D CVP+ YN +I
Sbjct: 318 VYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKVKRDG-CVPDASFYNSII 376
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
+ R++ +++ + + + + + +I C+ + + A + V+M E+
Sbjct: 377 YILGRAGRLEDANSVFDEMCRTGIPPTVAIFNTMISAACDHSQAENALKILVKMEEQSCK 436
Query: 258 PQKVTFETLYR 268
P T+ L +
Sbjct: 437 PDIKTYTPLLK 447
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y S+IY + R++ A EM G+ P V +N +++ C +
Sbjct: 366 VPDASFYNSIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIFNTMISAACDHSQ------ 419
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
NA K+ +M + +PD+ +++ +L + + ++ + M K I P +
Sbjct: 420 ----AENALKILVKMEEQSCKPDIKTYTPLLKLCCKRQWMKILPFLICHMFRKDISPDFS 475
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
TY +V LC G+ + L EMV G P ET++
Sbjct: 476 TYILLVTWLCRNGKPAQSCLFLEEMVLKGFMPKQETFD 513
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 157/288 (54%), Gaps = 14/288 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV ++++++ CK ++ A + MI+RGVEPNVVTYN L++G C R+ +
Sbjct: 266 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM----- 320
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVFD M +G PDV S+S +++ Y + + + ++ M K + P
Sbjct: 321 -----DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTV 375
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR-KDANGAMKLYRQ 179
TY++++ LC GR++DA L EMV G P +Y C +Y + + + A+ L +
Sbjct: 376 TYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY-CILLDYLCKNRRLDEAIALLKA 434
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
++ ++ P+I Y I+I ++ R++++++ L ++ +YT++I+GLC++
Sbjct: 435 IEGSNM-DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQG 493
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD-MLRTWRRLKKKL 286
EA + F EM KG P T+ + RG ++++ LR + L++ L
Sbjct: 494 LLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML 541
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 130/303 (42%), Gaps = 44/303 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ LI +C + R+ A L ++++ G +PN+ T+N L+ G+C
Sbjct: 92 PNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLC----------V 141
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I +FD+M G +P+V ++ +++ + ++ L M++ P V
Sbjct: 142 EGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVV 201
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ LC ++ A L EM+ G+SPS TYN + L +M
Sbjct: 202 YTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV 261
Query: 182 E--------------DDLCV--------------------PNIHTYNILIGMFMALNRMD 207
D LC PN+ TYN L+ + MD
Sbjct: 262 NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD 321
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
++++ + D+ SY+ LI+G C+ Q+ ++A F EM K L+P VT+ TL
Sbjct: 322 EAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM 381
Query: 268 RGL 270
GL
Sbjct: 382 HGL 384
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 106/253 (41%), Gaps = 11/253 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N +D A M+ P++ + LL + + K + +M
Sbjct: 38 NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKM----------KHYSTVLSLSHQMDS 87
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
GI P++ + +I+++ + + + L + + G P +AT+ ++++ LC G+I +
Sbjct: 88 FGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGE 147
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
L +M+ G P+ TY + A++L R M++ + C P++ Y +I
Sbjct: 148 VLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN-CQPDVVVYTSII 206
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
++ +++ + + + +Y LIH LC +WK EM+ ++
Sbjct: 207 DSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIM 266
Query: 258 PQKVTFETLYRGL 270
P V F T+ L
Sbjct: 267 PNVVIFSTVVDAL 279
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 76/146 (52%), Gaps = 10/146 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++++YT +I G C+ ++ A + +G+ PNV TY +++NG+C++ L
Sbjct: 442 PDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLL------ 495
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+F EM+ +G P+ +++++ + R ++ + L M +G V+T
Sbjct: 496 ----AEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVST 551
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVR 147
T +V+ L G + +++L E ++
Sbjct: 552 STVLVEMLSDDGLDQSVKQILSEFLQ 577
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 146/268 (54%), Gaps = 14/268 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y ++ GWC I R A L EM+ERG+ PN+ TYN +L G R IR
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ----------IR 247
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + F EM+ R E DV +++ V+H + A + + + + + M +G+ P+VATY +++
Sbjct: 248 HAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMI 307
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ LC +E+A + EMVR G P+ TYN + + + +L ++M E++ C
Sbjct: 308 QVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM-ENEGC 366
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE--- 243
PN TYN++I + + ++ ++ + + +LD+Y +LI G+ +++ ++
Sbjct: 367 EPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVV 426
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLI 271
A + +EM+E+G +P+K TF + GL+
Sbjct: 427 AGKLLLEMVERGFIPRKFTFNRVLNGLL 454
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 11/226 (4%)
Query: 49 VCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
+ R LHP + MR I P +F+IV Y+ A KP ++
Sbjct: 100 IAARLHLHPT---------VWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFL 150
Query: 109 FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168
M E G +A++ +++ LC R+E A EL +R S TYN + K
Sbjct: 151 NMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIK 209
Query: 169 DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
A+++ ++M E + PN+ TYN ++ F ++ E + +K + +D+ +Y
Sbjct: 210 RTPKALEVLKEMVERGIN-PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
T ++HG + K A F EMI +G+LP T+ + + L + D
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKD 314
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 106/234 (45%), Gaps = 4/234 (1%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A K+F M G D+ SF+ +L V ++ + + + + ++ + TV TY ++
Sbjct: 145 AVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILN 203
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
C R A E+L EMV G++P+ TYN K + A + + +MK+ D C
Sbjct: 204 GWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD-CE 262
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
++ TY ++ F + R +++ + + + +Y +I LC+K + A
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
F EM+ +G P T+ L RGL + L ++++ E FQ Y+
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE--PNFQTYN 374
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y ++I CK + ++ A EM+ RG EPNV TYNVL+ G+ H E
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL-----FHAGE- 350
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E++ M G EP+ ++++++ YS + + +L M P +
Sbjct: 351 ----FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLD 406
Query: 121 TYTSVVKCLCSCGRIED---AEELLGEMVRNGVSPSAETYN 158
TY ++ + R ED A +LL EMV G P T+N
Sbjct: 407 TYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFN 447
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 157/288 (54%), Gaps = 14/288 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV ++++++ CK ++ A + MI+RGVEPNVVTYN L++G C R+ +
Sbjct: 275 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM----- 329
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVFD M +G PDV S+S +++ Y + + + ++ M K + P
Sbjct: 330 -----DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTV 384
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR-KDANGAMKLYRQ 179
TY++++ LC GR++DA L EMV G P +Y C +Y + + + A+ L +
Sbjct: 385 TYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY-CILLDYLCKNRRLDEAIALLKA 443
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
++ ++ P+I Y I+I ++ R++++++ L ++ +YT++I+GLC++
Sbjct: 444 IEGSNM-DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQG 502
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD-MLRTWRRLKKKL 286
EA + F EM KG P T+ + RG ++++ LR + L++ L
Sbjct: 503 LLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML 550
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 130/303 (42%), Gaps = 44/303 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ LI +C + R+ A L ++++ G +PN+ T+N L+ G+C
Sbjct: 101 PNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLC----------V 150
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I +FD+M G +P+V ++ +++ + ++ L M++ P V
Sbjct: 151 EGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVV 210
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ LC ++ A L EM+ G+SPS TYN + L +M
Sbjct: 211 YTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV 270
Query: 182 E--------------DDLCV--------------------PNIHTYNILIGMFMALNRMD 207
D LC PN+ TYN L+ + MD
Sbjct: 271 NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD 330
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
++++ + D+ SY+ LI+G C+ Q+ ++A F EM K L+P VT+ TL
Sbjct: 331 EAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM 390
Query: 268 RGL 270
GL
Sbjct: 391 HGL 393
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 106/253 (41%), Gaps = 11/253 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N +D A M+ P++ + LL + + K + +M
Sbjct: 47 NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKM----------KHYSTVLSLSHQMDS 96
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
GI P++ + +I+++ + + + L + + G P +AT+ ++++ LC G+I +
Sbjct: 97 FGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGE 156
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
L +M+ G P+ TY + A++L R M++ + C P++ Y +I
Sbjct: 157 VLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN-CQPDVVVYTSII 215
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
++ +++ + + + +Y LIH LC +WK EM+ ++
Sbjct: 216 DSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIM 275
Query: 258 PQKVTFETLYRGL 270
P V F T+ L
Sbjct: 276 PNVVIFSTVVDAL 288
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 76/146 (52%), Gaps = 10/146 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++++YT +I G C+ ++ A + +G+ PNV TY +++NG+C++ L
Sbjct: 451 PDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLL------ 504
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+F EM+ +G P+ +++++ + R ++ + L M +G V+T
Sbjct: 505 ----AEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVST 560
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVR 147
T +V+ L G + +++L E ++
Sbjct: 561 STVLVEMLSDDGLDQSVKQILSEFLQ 586
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 148/284 (52%), Gaps = 15/284 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++++Y L+ GW + ++ AE+ M V+P VVTY L+ G CR R
Sbjct: 248 VPSIRVYNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCRM------RR 301
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA--HKPQLSLDKLNFMKEKGICPT 118
EK I ++ EMR +GIEP+V ++ ++ + A K + + + + E G PT
Sbjct: 302 SEKAI----ELVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAMGMMERCLVSETG--PT 355
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
++TY S+VK C G + A ++L M+ G P+ TYN FF+ + M LY
Sbjct: 356 ISTYNSLVKGFCKAGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSRCGKTEEGMNLYT 415
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M E P+ TY++LI M R+D+ ++ ++ LDL + TML+H LC+
Sbjct: 416 KMIESG-HTPDRLTYHLLIKMMCEEERLDLAVQVSKEMRARGCDLDLATSTMLVHLLCKM 474
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ +EA F +MI +G++PQ +TFE + L + + R+L
Sbjct: 475 HRLEEAFAEFEDMIRRGIVPQYLTFERMNNALRKRGLTEMARKL 518
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/245 (17%), Positives = 92/245 (37%), Gaps = 46/245 (18%)
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
D + GI+P + + + KP +L + MK+ G ++ + S++ L
Sbjct: 92 DALNRTGIKPCSGLLQAIFSHFDASPKPLFTLFRWA-MKQPGFESSMTLFNSMIDVLAKS 150
Query: 133 GRIEDAEELLGEMVRNGVSP---SAETYNCFFKEYR-------------------GRKDA 170
+ A L+ + + G P S+ T+ + Y +D
Sbjct: 151 RAFDSAWLLVLDRIEGGEEPELVSSNTFAVLIRRYARAGMTLSAIRTFEFAFSLDSIRDR 210
Query: 171 NGAMKLYRQMKEDDLC----------------------VPNIHTYNILIGMFMALNRMDM 208
+ L++ + D LC VP+I YN+L+ + ++
Sbjct: 211 DSEWSLFKILL-DSLCKEGHVRVASEYFDQQRGLDPSWVPSIRVYNVLLNGWFRSRKLKR 269
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++W +K + + +Y L+ G C ++ ++A + EM KG+ P + + +
Sbjct: 270 AEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGIEPNVIVYNPIID 329
Query: 269 GLIQS 273
L ++
Sbjct: 330 SLAEA 334
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 141/268 (52%), Gaps = 14/268 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y ++ GWC I R + A L EM++RG+ PN+ +YN +L G R I
Sbjct: 208 YNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQ----------IN 257
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A F EM+ R E DV +++ V+H + A + + + + M +KG+ P+VATY + +
Sbjct: 258 EAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFI 317
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ LC +++A + EMV G P++ TYN + R + AM+ +MK DD C
Sbjct: 318 QVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMK-DDGC 376
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE--- 243
PN+ TYN++I F +D +++ + + +LD+Y +LI + ++K +
Sbjct: 377 EPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLV 436
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLI 271
A +EM+++G +P+K TF + GL+
Sbjct: 437 AGNLLIEMVDRGFVPRKFTFNRVLNGLL 464
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 2/203 (0%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A KVF M G D+ SF+ +L V ++ + +++ + K K V +Y +V
Sbjct: 155 AVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCV-SYNVMVN 213
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
C R A E+L EMV+ G++P+ +YN K Y N A + +MK+ D C
Sbjct: 214 GWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRD-CE 272
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
++ TY +I F + R++++ + + + +Y I LC+K A
Sbjct: 273 IDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVI 332
Query: 248 FVEMIEKGLLPQKVTFETLYRGL 270
F EM+ KG +P +T+ + RGL
Sbjct: 333 FEEMVVKGYVPNSITYNLVIRGL 355
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 96/200 (48%), Gaps = 2/200 (1%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
MR + P +F+I+ Y+ A KP ++ M + G + ++ +++ LC R
Sbjct: 127 MRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKR 186
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+E A L ++ + +YN + K N A+++ ++M + L PN+ +YN
Sbjct: 187 VEMAYNLF-KVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGL-TPNLTSYN 244
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
++ + +++ + + +K + +D+ +YT +IHG + K A + F M++K
Sbjct: 245 TMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKK 304
Query: 255 GLLPQKVTFETLYRGLIQSD 274
G+LP T+ + L + D
Sbjct: 305 GVLPSVATYNAFIQVLCKKD 324
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y + I CK + +D A EM+ +G PN +TYN+++ G+C R + ER
Sbjct: 307 LPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEM---ER 363
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + M+ G EP+V ++++V+ + + +LD M P +
Sbjct: 364 -------AMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLD 416
Query: 121 TYTSVVKCLCSCGRIED---AEELLGEMVRNGVSPSAETYN 158
TY ++ + + +D A LL EMV G P T+N
Sbjct: 417 TYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFN 457
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 71/144 (49%), Gaps = 5/144 (3%)
Query: 133 GRIEDA---EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
R+ D+ L+ M + P+ +T+ + Y + A+K++ M + C +
Sbjct: 112 ARLRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFG-CFQD 170
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+ ++N ++ + R++M ++ KG + D SY ++++G C ++ +A +
Sbjct: 171 LQSFNTILDVLCKSKRVEMAYNLFKVFKG-KFRADCVSYNVMVNGWCLIKRTNKALEMLK 229
Query: 250 EMIEKGLLPQKVTFETLYRGLIQS 273
EM+++GL P ++ T+ +G ++
Sbjct: 230 EMVKRGLTPNLTSYNTMLKGYFRA 253
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 148/285 (51%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +L+ + + +D AER +G M++ G++PN+VT+N ++NG+C+ +
Sbjct: 183 PNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKM------ 236
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A KVFDEM G+ PD S++ ++ Y +A +L M +KGI P V T
Sbjct: 237 ----EDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+TS++ +C G +E A L+ +M G+ + T+ + + + A+ R M+
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR 352
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P++ YN LI + + RMD RE+ + ++ L D+ +Y+ +I C+
Sbjct: 353 QCRI-KPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 411
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A + +M+EKG+LP +T+ +L R L + L L K +
Sbjct: 412 HSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNM 456
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 141/305 (46%), Gaps = 17/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +++ + + A RF M+ GV PNV TYN+L+ +C R H E
Sbjct: 113 VPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRG--HRKE- 168
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + +MR G P+V +++ ++ + RA + + + M + G+ P +
Sbjct: 169 -------ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLV 221
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ S+V +C G++EDA ++ EM+R G++P +YN Y ++ A+ ++ +M
Sbjct: 222 TFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM 281
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + +P++ T+ LI + ++ + ++ L ++ ++T LI G C+K
Sbjct: 282 TQKGI-MPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 340
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
+A M + + P V + L G + R L K L + +T+ +
Sbjct: 341 LDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 400
Query: 296 EFQNY 300
Y
Sbjct: 401 IISAY 405
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 149/361 (41%), Gaps = 76/361 (21%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V +TSLI+ CK ++ A + +M ERG++ N VT+ L++G C++ L
Sbjct: 287 MPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 346
Query: 61 FEKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ +R A ++ EM +G++PDV ++S ++ Y
Sbjct: 347 AVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 406
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + M EKG+ P TY+S+++ LC R+ DA L M++ G+ P
Sbjct: 407 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEF 466
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI-------------------- 195
TY + + A+ L+ +M + + +P++ TY++
Sbjct: 467 TYTSLIDGHCKEGNVERALSLHDKMVKAGV-LPDVVTYSVLINGLSKSARAMEAQQLLFK 525
Query: 196 ------------------------------LIGMFMALNRMDMVREIWNHVKGSELGLDL 225
L+ F M+ +++ + LD
Sbjct: 526 LYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDG 585
Query: 226 DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK 285
Y++LIHG C +A + +M+++G P + +L RGL ++ M+ ++ ++
Sbjct: 586 SVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQ 645
Query: 286 L 286
L
Sbjct: 646 L 646
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 14/244 (5%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G P+V+ YN +L + + ++ +A + FD M G+ P+V +++I++
Sbjct: 111 GYVPSVLAYNAVLLALS-----------DASLTSARRFFDSMLSDGVAPNVYTYNILIRA 159
Query: 94 Y-SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
R H+ + +L L M+ G P V TY ++V G ++ AE L+G M+ G+ P
Sbjct: 160 LCGRGHRKE-ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKP 218
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
+ T+N A K++ +M + L P+ +YN L+G + +
Sbjct: 219 NLVTFNSMVNGMCKAGKMEDARKVFDEMMREGL-APDGVSYNTLVGGYCKAGCSHEALSV 277
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ + + D+ ++T LIH +C+ + A +M E+GL +VTF L G +
Sbjct: 278 FAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCK 337
Query: 273 SDML 276
L
Sbjct: 338 KGFL 341
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 91/224 (40%), Gaps = 40/224 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV------------ 49
P+ YTSLI G CK ++ A +M++ GV P+VVTY+VL+NG+
Sbjct: 463 PDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 522
Query: 50 ----------------------CRRASLHPNERFEK------TIRNAEKVFDEMRVRGIE 81
CR+A L K + A+KV+ M R
Sbjct: 523 LFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWN 582
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
D + +S+++H + RA +L M ++G P + S+++ L G + +A+++
Sbjct: 583 LDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQV 642
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ +++ AE + + + + M +D L
Sbjct: 643 IQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGL 686
>gi|15228767|ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis thaliana]
gi|34365579|gb|AAQ65101.1| At3g62470 [Arabidopsis thaliana]
gi|332646835|gb|AEE80356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 142/255 (55%), Gaps = 11/255 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YT L+ GWC++ + A R +MI++G++P++V +NV+L G+ R
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLR---------- 345
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A K+F M+ +G P+V S++I++ + + + +++ + M + G+ P A
Sbjct: 346 SRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 405
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + +++ ELL EM G P +TYN K +K A ++Y +M
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMI 465
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++++ P+IHT+N+++ + +M R +W + + D +SYT+LI GL + K
Sbjct: 466 QNEI-EPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKS 524
Query: 242 KEACQYFVEMIEKGL 256
+EAC+Y EM++KG+
Sbjct: 525 REACRYLEEMLDKGM 539
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 56/256 (21%)
Query: 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRN---AEKVFDEMRVRGIEPDVTSFSIVLHV 93
PN++TY VLLNG CR +RN A +++++M +G++PD+ + +++L
Sbjct: 296 PNMMTYTVLLNGWCR-------------VRNLIEAARIWNDMIDQGLKPDIVAHNVMLEG 342
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
R+ K ++ + MK KG CP V +YT +++ C +E A E +MV +G+ P
Sbjct: 343 LLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
A Y LI F ++D V E+
Sbjct: 403 AAVY------------------------------------TCLITGFGTQKKLDTVYELL 426
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ D +Y LI + ++ + A + + +MI+ + P TF + + +
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMA 486
Query: 274 ---DMLRT-WRRLKKK 285
+M R W + KK
Sbjct: 487 RNYEMGRAVWEEMIKK 502
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 25/188 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PNV+ YT +I +CK + ++ A + +M++ G++P+ Y L+ G + L
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 56 --------HPNE-----------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
HP + +K +A +++++M IEP + +F++++ Y
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 485
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A ++ M +KGICP +YT +++ L G+ +A L EM+ G+
Sbjct: 486 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLID 545
Query: 157 YNCFFKEY 164
YN F ++
Sbjct: 546 YNKFAADF 553
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 125/292 (42%), Gaps = 19/292 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ + Y S++ K + + L EM +G+ + T+ + + +A ER
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAM-----KAFAAAKER-- 245
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---KPQLSLDKLNFMKEKGICPTV 119
+ A +F+ M+ + V + + +L RA + Q+ DKL KE+ P +
Sbjct: 246 ---KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL---KER-FTPNM 298
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYT ++ C + +A + +M+ G+ P +N + + + A+KL+
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHV 358
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
MK C PN+ +Y I+I F + M+ E ++ + S L D YT LI G ++
Sbjct: 359 MKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 417
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K + EM EKG P T+ L + + M R+ K+ + I
Sbjct: 418 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEI 469
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 126/272 (46%), Gaps = 22/272 (8%)
Query: 23 AERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE 81
A RF ER G + TYN ++ + L +FE + V +EM +G+
Sbjct: 178 AFRFFCWAAERQGFAHDSRTYNSMM------SILAKTRQFETMV----SVLEEMGTKGL- 226
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC-SCGRIEDAEE 140
+ +F+I + ++ A + + ++ MK+ V T + CL S GR + +E
Sbjct: 227 LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET----INCLLDSLGRAKLGKE 282
Query: 141 --LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI- 197
+L + ++ +P+ TY + ++ A +++ M + L P+I +N+++
Sbjct: 283 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGL-KPDIVAHNVMLE 341
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
G+ + + D ++ +++ +K ++ SYT++I C++ + A +YF +M++ GL
Sbjct: 342 GLLRSRKKSDAIK-LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 258 PQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
P + L G L T L K++ E+
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 25/181 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC-RRASLHPNER 60
P+ +YT LI G+ ++D L EM E+G P+ TYN L+ + ++ H
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ K I+N V++EM +GI PD S+++++
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIG 520
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + + L M +KG+ + Y G+ E EEL +G +AE
Sbjct: 521 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEI 580
Query: 157 Y 157
+
Sbjct: 581 F 581
>gi|356560394|ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 612
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 150/265 (56%), Gaps = 15/265 (5%)
Query: 3 NVKMYTSLIYGWCK-INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+ K + ++ GWC I AER EMI+R ++ +VV+Y +++ + + L+
Sbjct: 298 DTKSFNIILNGWCNLIVSTSHAERIWHEMIKRRIQHDVVSYGSIISCYSKSSKLY----- 352
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K +R +FDEM+ R I PD ++ V++ ++ + +++ + M+ + P V T
Sbjct: 353 -KVLR----MFDEMKKRKITPDRKVYNAVIYALAKGRLVKEAVNLIGTMEGNDVTPDVVT 407
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++K LC ++++A++L EM++ +SP+ +T++ FF+ R +++ +L +MK
Sbjct: 408 YNSLIKPLCKAHKVDEAKQLFDEMLKRHLSPTIQTFHAFFRILRTKEE---VFELLDKMK 464
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P I TY +LI F ++D V +IW+ ++ E+ D SY +LIHGL K
Sbjct: 465 ELR-CYPTIETYIMLIRKFCRWCQLDDVFKIWDAMREDEISHDRSSYIVLIHGLFLNGKL 523
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+EA +Y+ EM EKG LP+ T E L
Sbjct: 524 EEAQRYYAEMQEKGFLPEPKTEEML 548
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 13/181 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K+Y ++IY K + A +G M V P+VVTYN L+ +C+
Sbjct: 368 PDRKVYNAVIYALAKGRLVKEAVNLIGTMEGNDVTPDVVTYNSLIKPLCK---------- 417
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++FDEM R + P + +F + + LDK MKE PT+ T
Sbjct: 418 AHKVDEAKQLFDEMLKRHLSPTIQTFHAFFRILRTKEEVFELLDK---MKELRCYPTIET 474
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +++D ++ M + +S +Y A + Y +M+
Sbjct: 475 YIMLIRKFCRWCQLDDVFKIWDAMREDEISHDRSSYIVLIHGLFLNGKLEEAQRYYAEMQ 534
Query: 182 E 182
E
Sbjct: 535 E 535
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
AE + EM++ + +Y Y ++++ +MK+ + P+ YN +I
Sbjct: 319 AERIWHEMIKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMKKRKI-TPDRKVYNAVI 377
Query: 198 GMFMALNRMDMVREIWNHV---KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
AL + +V+E N + +G+++ D+ +Y LI LC+ K EA Q F EM+++
Sbjct: 378 ---YALAKGRLVKEAVNLIGTMEGNDVTPDVVTYNSLIKPLCKAHKVDEAKQLFDEMLKR 434
Query: 255 GLLPQKVTFETLYRGL 270
L P TF +R L
Sbjct: 435 HLSPTIQTFHAFFRIL 450
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 145/288 (50%), Gaps = 10/288 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++K YT L+ GW + + + EM + G EP+VVTY +L+N C+
Sbjct: 248 VPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCK--------- 298
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +A ++F EM + +P F +++ + +L+ K G P
Sbjct: 299 -VRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETP 357
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +VV C RI+DA ++ EM ++GV P++ TY+ + A ++ +M
Sbjct: 358 TYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKM 417
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ C P + TY+I++ MF +++++ ++W+ +K + + +++LI+ LC + K
Sbjct: 418 SSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENK 477
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
AC+YF EM++ G+ P F L + LI+ T L +K+D+
Sbjct: 478 LDIACKYFQEMLDVGIRPPAALFSHLKQALIEDGRKDTVVLLAQKIDK 525
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 141/315 (44%), Gaps = 32/315 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPN----VVTYNVLLNGVCRRA--S 54
M N + Y +LI KI + +M + +M +GV +++ +G + A +
Sbjct: 144 MYNTESYNALIDSLGKIKQFNMIWNLVNDMKRKGVLTKETFALISRRYARSGKVKEAMNT 203
Query: 55 LHPNERF------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E+F + + +A+ VFD+M++R PD+ S++I+L + +
Sbjct: 204 FEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTILLEGWGQ 263
Query: 97 AHKPQLSLDKL-NFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
K L LD++ MK++G P V TY ++ C + +DA EL EM PS
Sbjct: 264 -EKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPH 322
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+ + + A++ +R+ K P TYN ++G + R+D + +
Sbjct: 323 IFCTLINGLGSVRRLSEALEFFRRSKASGFA-PETPTYNAVVGAYCWSMRIDDAYRMVDE 381
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM-IEKGLLPQKVTFETLYRGLIQSD 274
++ S +G + +Y +++H L + +K EA F +M E+ P T++ + R D
Sbjct: 382 MRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMD 441
Query: 275 ----MLRTWRRLKKK 285
++ W R+K K
Sbjct: 442 KVESAIKVWDRMKAK 456
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 116/277 (41%), Gaps = 32/277 (11%)
Query: 37 PNVVTYNVLLN--GVCRRASLHPNERFEKTIRNAE-KVFDEM------------------ 75
P + T ++ + +CR S +PN EK + A KV +
Sbjct: 74 PEIFTDKIIEDTRNICRLLSKNPNSSIEKLLLGASFKVSPALVLEVLKRLSNAGALALSF 133
Query: 76 -----RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+ +G + S++ ++ + + + + +N MK KG+ T T+ + +
Sbjct: 134 FKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMKRKGVL-TKETFALISRRYA 192
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
G++++A +M + G+ + +N + A ++ +MK VP+I
Sbjct: 193 RSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRF-VPDI 251
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
+Y IL+ + + + E++ +K D+ +Y +LI+ C+ +K+ +A + F E
Sbjct: 252 KSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFRE 311
Query: 251 MIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLK 283
M K P F TL GL S+ L +RR K
Sbjct: 312 MESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSK 348
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/235 (18%), Positives = 104/235 (44%), Gaps = 12/235 (5%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
++G N +YN L++ + + K + ++M+ +G+ T F+++
Sbjct: 140 QKGFMYNTESYNALIDSLGKI----------KQFNMIWNLVNDMKRKGVLTKET-FALIS 188
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
Y+R+ K + +++ M++ G+ + ++ L ++ A+ + +M
Sbjct: 189 RRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFV 248
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P ++Y + + K+ ++YR+MK++ P++ TY ILI + + + D E
Sbjct: 249 PDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGF-EPDVVTYGILINAYCKVRKYDDAIE 307
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ ++ + LI+GL ++ EA ++F G P+ T+ +
Sbjct: 308 LFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAV 362
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 156/307 (50%), Gaps = 19/307 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDM---AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
PNV Y +LI G+CK+ R+ A+ L EM+E V PN VT+NVL++G C+
Sbjct: 263 PNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCK------- 315
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
++ + A KVF+EM+ +G++P V +++ +++ K + L+ M + P
Sbjct: 316 ---DENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPN 372
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V TY +++ C +E+A EL + + G++P+ T+N Y A L +
Sbjct: 373 VITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQK 432
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M E +PN TYN LI F +M+ V+ + N ++ + D +Y +LI CEK
Sbjct: 433 VMLEKGF-LPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEK 491
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES-----ITF 293
++ K+A + EM++KGL P +T+ L G LR L+K++++E +T+
Sbjct: 492 KEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTY 551
Query: 294 GSEFQNY 300
Q Y
Sbjct: 552 NVLIQGY 558
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 140/275 (50%), Gaps = 11/275 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y SL+ G C +++ A+ L EM+ ++PNV+TYN L+NG C++
Sbjct: 336 PTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKK--------- 386
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A ++FD + +G+ P+V +F+ +LH Y + K + + M EKG P +T
Sbjct: 387 -KLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNAST 445
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C G++E+ + LL EM GV TYN + +K+ A +L +M
Sbjct: 446 YNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEML 505
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L P+ TYNIL+ + + + ++ ++ +Y +LI G C K K
Sbjct: 506 DKGL-KPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKL 564
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
++A EM+EKGL+P + T+E + +++ L
Sbjct: 565 EDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFL 599
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 111/211 (52%), Gaps = 4/211 (1%)
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E E V+ EM R I P++ +F+ V++ + K + D ++ MK G P V T
Sbjct: 208 ENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVT 267
Query: 122 YTSVVKCLCSCGRIE---DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
Y +++ C GR+ A+ +L EMV N VSP++ T+N + ++ + A+K++
Sbjct: 268 YNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFE 327
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M+ L P + TYN L+ +++ + + + + S L ++ +Y LI+G C+K
Sbjct: 328 EMQSQGL-KPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKK 386
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ +EA + F + ++GL P +TF TL G
Sbjct: 387 KLLEEARELFDNIGKQGLTPNVITFNTLLHG 417
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 86/157 (54%), Gaps = 10/157 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y LI G+C+ +++ + L EM RGV+ + VTYN+L++ C +
Sbjct: 440 LPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEK-------- 491
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K + A ++ DEM +G++P +++I+L+ Y + +L+ M+++G V
Sbjct: 492 --KEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVV 549
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
TY +++ C G++EDA LL EM+ G+ P+ TY
Sbjct: 550 TYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY 586
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI WC+ A R + EM+++G++P+ +TYN+LLNG C E +R
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYC----------MEGNLR 530
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + +M G +V ++++++ Y R K + + LN M EKG+ P TY +
Sbjct: 531 AALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK 590
Query: 127 KCLCSCGRIEDAE 139
+ + G + D E
Sbjct: 591 EEMMEKGFLPDIE 603
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 153/291 (52%), Gaps = 20/291 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V ++++++ CK +I A + MI RGVEPNVVTYN L++G C
Sbjct: 274 MPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHC---------- 323
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF----MKEKGIC 116
+ + A KVFD M G P+V S++ +++ Y + + +DK + M +K +
Sbjct: 324 LQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQR----MDKATYLFEEMCQKELI 379
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P TY +++ LC GR++DA L EMV +G P TY + + AM L
Sbjct: 380 PNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMAL 439
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+ ++ ++ P+I Y I+I ++ R+I++++ L ++ +YT++I+GLC
Sbjct: 440 LKTIEGSNM-DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLC 498
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRLKKKL 286
+ EA + F+EM G P T+ T+ +GL+Q+ + LR + L++ L
Sbjct: 499 RRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML 549
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 144/311 (46%), Gaps = 26/311 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI G C +I A +MI G +PNVVTY L+NG+C+ + + R
Sbjct: 135 PDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRL 194
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
++ + A +F +M +GI PD+ +++ ++H
Sbjct: 195 LRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCN 254
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + LN M I P V +++VV LC G+I +A +++ M+ GV P+ T
Sbjct: 255 LCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVT 314
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + + + A+K++ M + PN+ +YN LI + + RMD ++ +
Sbjct: 315 YNALMDGHCLQSEMDEAVKVFDTMVHNGY-APNVISYNTLINGYCKIQRMDKATYLFEEM 373
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
EL + +Y L+HGLC + ++A F EM+ G +P T+ L L + L
Sbjct: 374 CQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHL 433
Query: 277 RTWRRLKKKLD 287
L K ++
Sbjct: 434 DEAMALLKTIE 444
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 130/303 (42%), Gaps = 44/303 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V LI +C +NR A L ++++ G++P+ T+ L+ G+C
Sbjct: 100 PDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLC----------V 149
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I +A +FD+M G +P+V ++ +++ + ++ L M++ P V
Sbjct: 150 EGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 209
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ LC ++ +A L +MV G+SP TY + L QM
Sbjct: 210 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 269
Query: 182 E--------------DDLCV--------------------PNIHTYNILIGMFMALNRMD 207
D LC PN+ TYN L+ + MD
Sbjct: 270 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD 329
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
++++ + + ++ SY LI+G C+ Q+ +A F EM +K L+P VT+ TL
Sbjct: 330 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 389
Query: 268 RGL 270
GL
Sbjct: 390 HGL 392
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 11/253 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N +D A M+ P+ V +N LL + + K + ++M
Sbjct: 46 NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAK----------TKQYPTVFSLSNQMDS 95
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
GI PDV + +I+++ + ++P + L + + G+ P AT+T++++ LC G+I D
Sbjct: 96 FGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGD 155
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A L +M+ G P+ TY + N A++L R M++ + C P++ Y +I
Sbjct: 156 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN-CQPDVVVYTSII 214
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
++ +++ + G + D+ +YT LIH LC +WK +MI ++
Sbjct: 215 DSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIM 274
Query: 258 PQKVTFETLYRGL 270
P V F T+ L
Sbjct: 275 PDVVIFSTVVDAL 287
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++++YT +I G C+ ++ A + +G+ PNV TY +++NG+CRR L
Sbjct: 450 PDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD----- 504
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+F EM G PD +++ + + + ++ L M +G V+T
Sbjct: 505 -----EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVST 559
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVR 147
T +V+ LC + +++L E V+
Sbjct: 560 TTLLVEMLCDDKLDQSVKQILSEFVQ 585
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 1/154 (0%)
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
++DA M+ PS +N K L QM + P+++T N
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGI-PPDVYTLN 106
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
ILI F LNR + + L D ++T LI GLC + K +A F +MI +
Sbjct: 107 ILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE 166
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
G P VT+ TL GL + RL + +++
Sbjct: 167 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQ 200
>gi|356531098|ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 141/289 (48%), Gaps = 16/289 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + Y L++GWC++ + L EMIE G P+ TYN ++ C+
Sbjct: 164 PNAETYNILVFGWCRVRNPTRGMKLLEEMIELGHRPDNFTYNTAIDTYCKTG-------- 215
Query: 62 EKTIRNAEKVFDEMRVRGI---EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
I A +F+ MR +G P +++I++ ++ + + + M G P
Sbjct: 216 --MITEAVDLFEFMRTKGSTISSPTAKTYAIIIVALAQHDRMEDCFKLIGHMISSGCLPD 273
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V TY +++ +C CG+I++A + L EM P TYNCF K K + A+KLY
Sbjct: 274 VTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYG 333
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M E + C+P++ TYN+LI MF ++ D E W + D D+Y ++I GL
Sbjct: 334 RMIELN-CIPSVQTYNMLISMFFEMDDPDGAFETWQEIDNRGCRPDTDTYCVMIEGLFNC 392
Query: 239 QKWKEACQYFVEMIEKGL-LPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
K ++AC E+I +G+ LP K F++ L L+ RL + +
Sbjct: 393 NKMEDACFLLEEVINEGVKLPYK-KFDSFLMQLSVIGDLQAIHRLSEHM 440
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +I G C +ID A +FL EM + P++VTYN L +C
Sbjct: 271 LPDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCD--------- 321
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K +A K++ M P V ++++++ ++ P + + + +G P
Sbjct: 322 -NKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFETWQEIDNRGCRPDTD 380
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ L +C ++EDA LL E++ GV + ++ F + D +L M
Sbjct: 381 TYCVMIEGLFNCNKMEDACFLLEEVINEGVKLPYKKFDSFLMQLSVIGDLQAIHRLSEHM 440
Query: 181 KE 182
K+
Sbjct: 441 KK 442
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 114/292 (39%), Gaps = 60/292 (20%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
+ + L+ CK ++ AE +M + V+PN TYN+L+ G CR
Sbjct: 132 INAFNLLLDALCKCCLVEDAESLYKKM-RKTVKPNAETYNILVFGWCR------------ 178
Query: 64 TIRNAE---KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC---P 117
+RN K+ +EM G PD +++ + Y + ++D FM+ KG P
Sbjct: 179 -VRNPTRGMKLLEEMIELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSP 237
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T TY ++ L R+ED +L+G M+ +G
Sbjct: 238 TAKTYAIIIVALAQHDRMEDCFKLIGHMISSG---------------------------- 269
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
C+P++ TY +I ++D + + D+ +Y + LC+
Sbjct: 270 --------CLPDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCD 321
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD----MLRTWRRLKKK 285
+K ++A + + MIE +P T+ L + D TW+ + +
Sbjct: 322 NKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFETWQEIDNR 373
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 143/285 (50%), Gaps = 17/285 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI G CK+ A R L M + +PNVV ++ L++ +C+
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCK---------- 222
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A +F EM +GI P++ +++ ++H + + + +N M + I P V T
Sbjct: 223 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 282
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+VV LC G + +A +++ M+ GV P+ TYN + R + + A+K++ M
Sbjct: 283 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 342
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D CV N+ +YN LI + + +D ++ + EL + +Y LIHGLC +
Sbjct: 343 HKD-CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 401
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
++A F EM+ +G +P VT+ TL SD L R L K +
Sbjct: 402 QDAISLFHEMVARGQIPDLVTYRTL------SDYLCKNRHLDKAM 440
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 141/287 (49%), Gaps = 12/287 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V +++ CK + A + MI RGVEPNVVTYN L++G C R NE
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR-----NE- 330
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A KVFD M + +V S++ +++ Y + ++ M + + P
Sbjct: 331 ----VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 386
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC GR++DA L EMV G P TY + + AM L + +
Sbjct: 387 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 446
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P+I Y ++ ++ R++++++ L ++ +Y ++IHGLC++
Sbjct: 447 EGSNW-DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 505
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD-MLRTWRRLKKKL 286
EA + F EM + G P T+ + RG ++++ LRT L++ L
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 552
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 138/312 (44%), Gaps = 26/312 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-----RASLH 56
PNV ++++LI CK ++ A EMI +G+ PN+VTYN L++G+C+ +
Sbjct: 208 PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 267
Query: 57 PNERF--------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
NE E + A V D M RG+EP+V +++ ++ +
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ +++ + M K V +Y +++ C ++ A L EM R ++P+ T
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN A+ L+ +M +P++ TY L +D + +
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQ-IPDLVTYRTLSDYLCKNRHLDKAMALLKAI 446
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+GS D+ YT ++ G+C + ++A F + KGL P T+ + GL + +L
Sbjct: 447 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 506
Query: 277 RTWRRLKKKLDE 288
+L ++++
Sbjct: 507 AEASKLFSEMNK 518
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 133/303 (43%), Gaps = 44/303 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +I C +NR+D A L ++++ G +P+ T+ L+ G+C
Sbjct: 103 PDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLC----------V 152
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A +FD+M G +P+V ++ +++ + ++ L M++ P V
Sbjct: 153 EGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVV 212
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN------CFFKEYRGRKDANGAMK 175
+++++ LC ++ +A + EM+ G+SP+ TYN C E++ M
Sbjct: 213 FSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 272
Query: 176 LYRQMKE--------DDLCV--------------------PNIHTYNILIGMFMALNRMD 207
+ M + D LC PN+ TYN L+ N +D
Sbjct: 273 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 332
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ ++++ + + ++ SY LI+G C+ Q +A F EM + L P VT+ TL
Sbjct: 333 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392
Query: 268 RGL 270
GL
Sbjct: 393 HGL 395
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 15/251 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ NV Y +LI G+CKI +D A EM + + PN VTYN L++G+C L
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL----- 401
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++A +F EM RG PD+ ++ + + ++ L ++ P +
Sbjct: 402 -----QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT+++ +C G +EDA +L + G+ P+ TYN + A KL+ +M
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE--- 237
++ C PN TYN++ F+ N E+ + +D+ + T+L+ L +
Sbjct: 517 NKNG-CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL 575
Query: 238 KQKWKEA-CQY 247
Q K+ C+Y
Sbjct: 576 DQSVKQILCKY 586
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N +D A M+ + P+ V +N LL + + + T+ + + D
Sbjct: 49 NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAK-------TKHHSTLLSLSRQMDSF-- 99
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
GI PDV + +IV++ ++ + L + + G P T+T++++ LC G+I +
Sbjct: 100 -GIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGE 158
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A L +M+ G P+ TY + + A++L R M++ + C PN+ ++ LI
Sbjct: 159 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN-CQPNVVVFSTLI 217
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
++ I++ + + ++ +Y LIHGLC+ +WK EM++ ++
Sbjct: 218 DSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIM 277
Query: 258 PQKVTFETLYRGLIQSDML 276
P T T+ L + M+
Sbjct: 278 PDVFTLNTVVDALCKEGMV 296
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 8/237 (3%)
Query: 54 SLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA--HKPQLSLDKLNFMK 111
+ H T+ A F+ M + P F+ +L ++ H LSL + M
Sbjct: 40 TFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQ--MD 97
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
GI P V T V+ LC R++ A L ++++ G P A T+ +
Sbjct: 98 SFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIG 157
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A+ L+ +M + PN+ TY LI + + ++ ++ ++ L
Sbjct: 158 EALHLFDKMIGEGF-QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
I LC+ ++ EA F EMI KG+ P VT+ +L GL + L W+ + ++E
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK---LCEWKHVTTLMNE 270
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 145/268 (54%), Gaps = 14/268 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y ++ GWC I R A L EM+ERG+ PN+ TYN++LNG R NE
Sbjct: 199 YNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAG--QTNE------- 249
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A F EM+ R + DV +++ V+H + + + + N M + G+ P+VAT+ +++
Sbjct: 250 -AWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALI 308
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ LC +E+A + EMV+ G P++ TYN + + AM+L +M++DD C
Sbjct: 309 QILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDD-C 367
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE--- 243
PN+ TYNILI F ++ +++ + + +LD+Y +LI+ + ++
Sbjct: 368 EPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLV 427
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLI 271
A + VEM+++G LP+K+TF + GL+
Sbjct: 428 AGKLLVEMVDRGFLPRKLTFNRVLDGLL 455
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 16/214 (7%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V YTS+I+G + I A +M++ GV P+V T+N L+ +C++ S
Sbjct: 265 DVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDS-------- 316
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ NA +F+EM RG P+ ++++V+ + Q +++ + M++ P V TY
Sbjct: 317 --VENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTY 374
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG---AMKLYRQ 179
+++ C G IE +L +M P+ +TYN RK+++ A KL +
Sbjct: 375 NILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVE 434
Query: 180 MKEDDLCVPNIHTYN-ILIGMFMALNRMDMVREI 212
M + +P T+N +L G+ + N+ D +EI
Sbjct: 435 MVDRGF-LPRKLTFNRVLDGLLLTGNQ-DFAKEI 466
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 105/222 (47%), Gaps = 2/222 (0%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A VF M G D++SF+ +L V ++ + +++ + +K K V +Y +V
Sbjct: 146 AVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFKADCV-SYNIIVN 204
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
C R A E+L EMV G++P+ TYN Y N A + +MK+ C
Sbjct: 205 GWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRK-CD 263
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
++ TY +I + + R ++N + + + ++ LI LC+K + A
Sbjct: 264 IDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILI 323
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
F EM+++G +P +T+ + RGL ++ L ++++++
Sbjct: 324 FEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDD 365
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 8/207 (3%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+ MR + P +F+I+ Y+ KP ++ M E G ++++ +++ LC
Sbjct: 114 LVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLC 173
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
R+E A L + ++ +YN + K A+++ ++M E L PN+
Sbjct: 174 KSKRVEMAYNLF-KALKGKFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGL-TPNL 231
Query: 191 HTYNILIGMFMALNRMDMVREIWN---HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
TYNI++ + R E W +K + +D+ +YT +IHGL + K A
Sbjct: 232 TTYNIMLNGYF---RAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNV 288
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSD 274
F +M++ G+LP TF L + L + D
Sbjct: 289 FNQMVKDGVLPSVATFNALIQILCKKD 315
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + +LI CK + ++ A EM++RG PN +TYN+++ G+C H E
Sbjct: 298 LPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLC-----HVGE- 351
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A ++ + M EP+V +++I++ + A + + LD M P +
Sbjct: 352 ----MQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLD 407
Query: 121 TYTSVVKCLC---SCGRIEDAEELLGEMVRNGVSPSAETYN 158
TY ++ + + + A +LL EMV G P T+N
Sbjct: 408 TYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFN 448
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 150/285 (52%), Gaps = 19/285 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V MY ++I G CK ++ A F EM RG+ P+V+TY+ L+ G C L
Sbjct: 270 PDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQL------ 323
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +EM ++ I PDV +++I++ + K + + + L M ++G+ P V T
Sbjct: 324 ----MGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVT 379
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C G + +A+++ MV+ V+PS +YN K + AM L R+M
Sbjct: 380 YSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREML 439
Query: 182 EDDLCVPNIHTYNILIGMFMALNR----MDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
++ VPN TYN LI R +D+++E+ H +G D+ +YT L+ GLC+
Sbjct: 440 HKNV-VPNTVTYNSLIDGLCKSGRITSALDLMKEL--HHRGQP--ADVITYTSLLDGLCK 494
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
Q +A F++M E+G+ P K T+ L GL + L+ ++L
Sbjct: 495 NQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKL 539
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 147/301 (48%), Gaps = 16/301 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT LI CK ++ A+ LG M + GV+PNVVTY+ L++G C +H
Sbjct: 340 PDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVH----- 394
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA+++F M + P V S++I+++ + +++ L M K + P T
Sbjct: 395 -----NAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVT 449
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GRI A +L+ E+ G TY ++ + A+ L+ +MK
Sbjct: 450 YNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMK 509
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + PN +TY LI R+ ++++ H+ +D+ +Y ++I GLC++
Sbjct: 510 ERGI-QPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGML 568
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG-SEFQNY 300
EA +M + G +P VTFE + R L + D +KL E I G F+N+
Sbjct: 569 DEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKD----ENDKAEKLLHEMIAKGLLHFRNF 624
Query: 301 H 301
H
Sbjct: 625 H 625
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 145/345 (42%), Gaps = 61/345 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P++ + ++ K+ A +M +G+EP++VT ++L+N C +
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189
Query: 56 ---------HPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLH---- 92
PN T ++ + D++ +G + + S+ +L+
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249
Query: 93 -------------VYSRAHKPQLSL----------DKL-----NF---MKEKGICPTVAT 121
+ R+ +P + + DKL +F M +GI P V T
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C G++ A LL EM ++P TY A L M
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + PN+ TY+ L+ + + + ++I++ + +E+ + SY ++I+GLC+ +
Sbjct: 370 KEGV-KPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSV 428
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EA EM+ K ++P VT+ +L GL +S + + L K+L
Sbjct: 429 DEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKEL 473
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y SLI G CK RI A + E+ RG +V+TY LL+G+C+ N+
Sbjct: 444 VPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCK------NQN 497
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K I +F +M+ RGI+P+ +++ ++ + + + + + KG C V
Sbjct: 498 LDKAI----ALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVY 553
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC G +++A + +M NG P A T+ + + + + A KL +M
Sbjct: 554 TYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEM 613
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 21 DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80
D +F G ++ R P+++ + +L + + K A + +M V+GI
Sbjct: 115 DAVSQFNGMLLMRNT-PSIIEFGKILGSLVKM----------KHFPTAISLSKQMEVKGI 163
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
EPD+ + SI+++ + + S L + + G P T+++K LC G ++ +
Sbjct: 164 EPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLH 223
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--------------DDLC 186
++V G + +Y + A+KL R +++ D LC
Sbjct: 224 FHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLC 283
Query: 187 --------------------VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
P++ TY+ LI F ++ + N + + D+
Sbjct: 284 KDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVY 343
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+YT+LI LC++ K KEA M ++G+ P VT+ TL G
Sbjct: 344 TYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDG 386
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 143/285 (50%), Gaps = 17/285 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI G CK+ A R L M + +PNVV ++ L++ +C+
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCK---------- 222
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A +F EM +GI P++ +++ ++H + + + +N M + I P V T
Sbjct: 223 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 282
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+VV LC G + +A +++ M+ GV P+ TYN + R + + A+K++ M
Sbjct: 283 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 342
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D CV N+ +YN LI + + +D ++ + EL + +Y LIHGLC +
Sbjct: 343 HKD-CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 401
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
++A F EM+ +G +P VT+ TL SD L R L K +
Sbjct: 402 QDAISLFHEMVARGQIPDLVTYRTL------SDYLCKNRHLDKAM 440
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 141/287 (49%), Gaps = 12/287 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V +++ CK + A + MI RGVEPNVVTYN L++G C R NE
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR-----NE- 330
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A KVFD M + +V S++ +++ Y + ++ M + + P
Sbjct: 331 ----VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 386
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC GR++DA L EMV G P TY + + AM L + +
Sbjct: 387 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 446
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P+I Y ++ ++ R++++++ L ++ +Y ++IHGLC++
Sbjct: 447 EGSNW-DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 505
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD-MLRTWRRLKKKL 286
EA + F EM + G P T+ + RG ++++ LRT L++ L
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 552
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 138/312 (44%), Gaps = 26/312 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-----RASLH 56
PNV ++++LI CK ++ A EMI +G+ PN+VTYN L++G+C+ +
Sbjct: 208 PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 267
Query: 57 PNERF--------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
NE E + A V D M RG+EP+V +++ ++ +
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ +++ + M K V +Y +++ C ++ A L EM R ++P+ T
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN A+ L+ +M +P++ TY L +D + +
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQ-IPDLVTYRTLSDYLCKNRHLDKAMALLKAI 446
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+GS D+ YT ++ G+C + ++A F + KGL P T+ + GL + +L
Sbjct: 447 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 506
Query: 277 RTWRRLKKKLDE 288
+L ++++
Sbjct: 507 AEASKLFSEMNK 518
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 133/303 (43%), Gaps = 44/303 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +I C +NR+D A L ++++ G +P+ T+ L+ G+C
Sbjct: 103 PDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLC----------V 152
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A +FD+M G +P+V ++ +++ + ++ L M++ P V
Sbjct: 153 EGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVV 212
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN------CFFKEYRGRKDANGAMK 175
+++++ LC ++ +A + EM+ G+SP+ TYN C E++ M
Sbjct: 213 FSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 272
Query: 176 LYRQMKE--------DDLCV--------------------PNIHTYNILIGMFMALNRMD 207
+ M + D LC PN+ TYN L+ N +D
Sbjct: 273 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 332
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ ++++ + + ++ SY LI+G C+ Q +A F EM + L P VT+ TL
Sbjct: 333 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392
Query: 268 RGL 270
GL
Sbjct: 393 HGL 395
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 133/303 (43%), Gaps = 20/303 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ NV Y +LI G+CKI +D A EM + + PN VTYN L++G+C L
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL----- 401
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++A +F EM RG PD+ ++ + + ++ L ++ P +
Sbjct: 402 -----QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT+++ +C G +EDA +L + G+ P+ TYN + A KL+ +M
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE--- 237
++ C PN TYN++ F+ N E+ + +D+ + T+L+ L +
Sbjct: 517 NKNG-CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL 575
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
Q K+ V + E+ L + + F+ + M+ L KL TF E
Sbjct: 576 DQSVKQILCKIVILYERN-LGETLLFQFWMEAPSEKLMVTECEELSMKL-----TFHEEL 629
Query: 298 QNY 300
Q Y
Sbjct: 630 QEY 632
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N +D A M+ + P+ V +N LL + + + T+ + + D
Sbjct: 49 NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAK-------TKHHSTLLSLSRQMDSF-- 99
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
GI PDV + +IV++ ++ + L + + G P T+T++++ LC G+I +
Sbjct: 100 -GIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGE 158
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A L +M+ G P+ TY + + A++L R M++ + C PN+ ++ LI
Sbjct: 159 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN-CQPNVVVFSTLI 217
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
++ I++ + + ++ +Y LIHGLC+ +WK EM++ ++
Sbjct: 218 DSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIM 277
Query: 258 PQKVTFETLYRGLIQSDML 276
P T T+ L + M+
Sbjct: 278 PDVFTLNTVVDALCKEGMV 296
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 8/237 (3%)
Query: 54 SLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA--HKPQLSLDKLNFMK 111
+ H T+ A F+ M + P F+ +L ++ H LSL + M
Sbjct: 40 TFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQ--MD 97
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
GI P V T V+ LC R++ A L ++++ G P A T+ +
Sbjct: 98 SFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIG 157
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A+ L+ +M + PN+ TY LI + + ++ ++ ++ L
Sbjct: 158 EALHLFDKMIGEGF-QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
I LC+ ++ EA F EMI KG+ P VT+ +L GL + L W+ + ++E
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK---LCEWKHVTTLMNE 270
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 148/295 (50%), Gaps = 28/295 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+V YT+L++ CK + D A+ L EMI RG P+ VT++ L++G+C+
Sbjct: 76 PDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRV 135
Query: 52 ------RASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
R + + FE I+ A KV + +G P V F++V++ +
Sbjct: 136 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 195
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A + L M EKG P V T+T ++ LC R+ +A++LL +MV G SP+
Sbjct: 196 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVV 255
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY+ + + A +L++ M+ + C PN+ T+NILI R++ R++++
Sbjct: 256 TYSTVINGLCKQGQVDDAYELFQLMERRN-CPPNVVTHNILIDGLCKAKRIEEARQLYHR 314
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL-LPQKVTFETLYRG 269
++ + D+ +Y LI GLC+ + EA Q F + E G+ VT+ TL+ G
Sbjct: 315 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 369
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 10/273 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V M+ +I G+CK +D A + L MIE+G PNV T+ +L+ G+C+
Sbjct: 182 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCK---------- 231
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++ ++M G P+V ++S V++ + + + + M+ + P V T
Sbjct: 232 ANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVT 291
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC RIE+A +L M G +P TYN + A +L++ +
Sbjct: 292 HNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIP 351
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + N TY+ L + AL RM I++ + DL +YT LI C+ +
Sbjct: 352 ESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRA 411
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
E + EM KG P+ T + GL + +
Sbjct: 412 VEVVELVEEMASKGFPPRVNTLSAVLGGLFEGN 444
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 134/274 (48%), Gaps = 12/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV +T LI G CK NR+ A++ L +M+ G PNVVTY+ ++NG+C++
Sbjct: 216 VPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQ------ 269
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +A ++F M R P+V + +I++ +A + + + + M+E G P +
Sbjct: 270 ----VDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDII 325
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS-AETYNCFFKEYRGRKDANGAMKLYRQ 179
TY S++ LC ++++A +L + +GVS + A TY+ F Y A +++
Sbjct: 326 TYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSM 385
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ + P++ TY LI + +R V E+ + +++ + ++ GL E
Sbjct: 386 LVDKGF-SPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGN 444
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ A Q F M +G + + + G+ ++
Sbjct: 445 HTERAIQLFDSMAARGCTDDALIYNLVVEGMARA 478
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 140/313 (44%), Gaps = 26/313 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS-LHPNE 59
MPN Y LI G+ +D+A + L EM G E N V + L+ G+C + E
Sbjct: 6 MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65
Query: 60 RFEKTIRN-----------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F ++ A+ + EM RG PD +FS ++ +
Sbjct: 66 HFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCS-CGRIEDAEELLGEMVRNGVSPSAE 155
+ + L + ++G+ + A + ++++ LC+ +E A ++LG ++ G +P+
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+N + KD + A KL M E CVPN+ T+ ILI NR+ +++
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKG-CVPNVFTFTILITGLCKANRVGEAQQLLEK 244
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ ++ +Y+ +I+GLC++ + +A + F M + P VT L GL ++
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 304
Query: 276 LRTWRRLKKKLDE 288
+ R+L ++ E
Sbjct: 305 IEEARQLYHRMRE 317
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 124/291 (42%), Gaps = 32/291 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + LI G CK RI+ A + M E G P+++TYN L++G+C+ S +E F
Sbjct: 287 PNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK--SFQVDEAF 344
Query: 62 E--KTI--------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
+ +TI +A ++F + +G PD+ +++ ++
Sbjct: 345 QLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILE 404
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Y + + ++ + M KG P V T ++V+ L E A +L M G +
Sbjct: 405 YCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDD 464
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQM--KEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
A YN + N A+ + Q+ K D P+ + L+ + R D ++
Sbjct: 465 ALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQ 524
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
+ + + + SY L+ GL Q+W EA Q F M+ G P+ T
Sbjct: 525 LLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 575
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 113/265 (42%), Gaps = 49/265 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YTSLI +CK +R + EM +G P V T + +L G L
Sbjct: 393 PDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGG------LFEGNHT 446
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFM---KEKGICPT 118
E+ I ++FD M RG D +++V+ +RA K +L L + +++ P+
Sbjct: 447 ERAI----QLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPS 502
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ ++V+ LC GR +DA++LL +M G + + +YN + + A +++
Sbjct: 503 SSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFE 562
Query: 179 QM-----------------------KEDDL-----------CVPNIHTYNILIGMFMALN 204
M K DD C P+I T N LIG +
Sbjct: 563 AMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSG 622
Query: 205 RMDMVREIWNHVKGSELGLDLDSYT 229
R D+ R++ + +E GL+ + T
Sbjct: 623 RADLARKLLEEM--TEAGLEPNDTT 645
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
P V ++++ G + N + A + M RG + + YN+++ G+ RAS H
Sbjct: 428 PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGM-ARASKHNKALA 486
Query: 58 ---------NERFEKT----------------IRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
+ +F + +A+++ +M RG V+S++ +L
Sbjct: 487 VLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLS 546
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
SR + + M G P ++T V+ LCS +++DA EL+ M + G P
Sbjct: 547 GLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCP 606
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
ET N Y A+ A KL +M E L PN T+++L
Sbjct: 607 DIETCNTLIGGYCKSGRADLARKLLEEMTEAGL-EPNDTTHDLL 649
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 34/120 (28%)
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS------------------------- 219
+C+PN TY ILI F + +D+ ++ +K +
Sbjct: 4 ICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEA 63
Query: 220 ---------ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ D+ +YT L+H LC+ K+ EA EMI +G P VTF TL GL
Sbjct: 64 LEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 146/299 (48%), Gaps = 18/299 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y ++I G+CK+ R D A FL M +G+EPN++T+N+++NG+CR L
Sbjct: 15 LPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRL----- 69
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +V EM +G PD +++ +++ Y + +L M G+ P V
Sbjct: 70 -----KETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS++ +C G + A E +M G+ P+ TY + + + A ++ +M
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+P+I TYN LI L RM+ + + G + D+ SY+ +I G Q+
Sbjct: 185 TRSGF-IPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-------DMLRTWRRLKKKLDEESIT 292
A Q VEMI K +LP VT+ +L +GL + DM + +K DE + T
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYT 302
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 16/282 (5%)
Query: 22 MAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE 81
M RF EM G PNVVTYN +++G C+ K A M ++G+E
Sbjct: 1 MGLRFFKEMERNGCLPNVVTYNTMIDGYCKL----------KRTDEAFGFLRSMGLKGLE 50
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
P++ +F+++++ R + + + + L M KG P TY ++V C G A L
Sbjct: 51 PNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVL 110
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
EMVRNG+SP+ TY + N AM+ + QM LC PN TY +I F
Sbjct: 111 HAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLC-PNERTYTTIINGFA 169
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
+D + N + S + +Y LI+G C + +EA +M+ KG+LP V
Sbjct: 170 QQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVV 229
Query: 262 TFETLYRGLIQSDMLRTWRRLK-----KKLDEESITFGSEFQ 298
++ T+ G ++ L ++K K + +++T+ S Q
Sbjct: 230 SYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQ 271
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 135/299 (45%), Gaps = 27/299 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + YT++I G+ + +D A R L EM G P++VTYN L+NG C R
Sbjct: 156 PNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLG------RM 209
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ I + +M +G+ PDV S+S ++ ++R + + M K + P T
Sbjct: 210 EEAI----GLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVT 265
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S+++ LC R+ +A ++ EM+ + P TY Y D N A+ L+ +M
Sbjct: 266 YSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMI 325
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREI---------------WNHVKGSELGLDLD 226
+ +P+ TYN+LI R R + +N + + ++
Sbjct: 326 QKGF-LPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFK 384
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRTWRRLKK 284
S L+ G C K EA Q F MI K P + + + G + ++L+ ++ K+
Sbjct: 385 SAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKE 443
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
K +L+ G+C +D A++ MI + +PN YNV+++G CR +
Sbjct: 384 KSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGN---------- 433
Query: 65 IRNAEKVFDEM-RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+ A K++ EM V + VT ++V +++ +L+ + ++ + T A +
Sbjct: 434 VLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKL--TDAELS 491
Query: 124 SV-VKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
V V+ G ++ LL EM ++G+ PS T
Sbjct: 492 KVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 151/315 (47%), Gaps = 27/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +I G+C R A+R L EM+ER + PNVVTYN L+N + F
Sbjct: 286 PNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKF-----F 340
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A +++DEM RGI P+ +++ ++ + + + + D M KG P V T
Sbjct: 341 E-----AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 395
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ C RI+D ELL EM R G+ + TYN + D N A+ L +QM
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD-----------SYTM 230
+C P+I T N L+ ++ E++ ++ S++ LD +Y +
Sbjct: 456 SSGVC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNI 514
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKK 285
LI GL + K+ EA + + EM +G++P +T+ ++ GL + L ++ K
Sbjct: 515 LICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 574
Query: 286 LDEESITFGSEFQNY 300
+TF + Y
Sbjct: 575 FSPNVVTFNTLINGY 589
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 22/281 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y S+I G+CK +R+D AE M +G P+V T+ L++G C
Sbjct: 355 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCG--------- 405
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K I + ++ EM RG+ + +++ ++H + +LD M G+CP +
Sbjct: 406 -AKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV 464
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVR-----------NGVSPSAETYNCFFKEYRGRKD 169
T +++ LC G+++DA E+ M + NGV P TYN
Sbjct: 465 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGK 524
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A +LY +M + VP+ TY+ +I +R+D +++ + ++ ++
Sbjct: 525 FLEAEELYEEMPHRGI-VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFN 583
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
LI+G C+ + + + F EM +G++ + + TL G
Sbjct: 584 TLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGF 624
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 135/312 (43%), Gaps = 51/312 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + L+ ++ R D+ +M + + ++ ++ +L+ C + L
Sbjct: 78 LPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLP---- 133
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTV 119
A F ++ G+ PDV +F+ +LH H+ +LD + IC P V
Sbjct: 134 ------FALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFH-----QICRPDV 182
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+T+++ LC GR+ +A LL MV NG+ P TY F D A+ L R+
Sbjct: 183 LTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRK 242
Query: 180 MKE---------------DDLC--------------------VPNIHTYNILIGMFMALN 204
M+E D LC PNI TYN +IG F
Sbjct: 243 MEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISG 302
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
R + + + ++ ++ +Y LI+ ++ K+ EA + + EM+ +G++P +T+
Sbjct: 303 RWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYN 362
Query: 265 TLYRGLIQSDML 276
++ G + D L
Sbjct: 363 SMIDGFCKQDRL 374
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 36/234 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+ N Y +LI+G+C + ++ A +MI GV P++VT N LL+G+C L
Sbjct: 425 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 484
Query: 56 ---------------HPNERFEKTIRN----------------AEKVFDEMRVRGIEPDV 84
HP E + AE++++EM RGI PD
Sbjct: 485 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 544
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++S ++ + + + M K P V T+ +++ C GR++D EL E
Sbjct: 545 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 604
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
M R G+ A Y +R + NGA+ ++++M + I N+L G
Sbjct: 605 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 658
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 112/272 (41%), Gaps = 53/272 (19%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + +A +F +M P V F+ ++ R +P L + M+ K I + ++
Sbjct: 60 KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++KC CSC ++ A G++ + G+ P T+ + A+ L+ Q
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQ--- 176
Query: 183 DDLCVPNIHTYNILI-------------------------------GMFM---------- 201
+C P++ T+ L+ G F+
Sbjct: 177 --ICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234
Query: 202 -ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
ALN + + EI +H+K + + Y+ +I GLC+ + ++ F+EM +KG+ P
Sbjct: 235 SALNLLRKMEEI-SHIKPNVV-----IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNI 288
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
VT+ + G S +RL +++ E I+
Sbjct: 289 VTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 10/180 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI G + AE EM RG+ P+ +TY+ +++G+C+++ L
Sbjct: 507 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD----- 561
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F M + P+V +F+ +++ Y +A + L+ M +GI
Sbjct: 562 -----EATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAII 616
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ G I A ++ EM+ +GV P T + +++ A+ + ++
Sbjct: 617 YITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+S+I G CK +R+D A + M + PNVVT+N L+NG C+
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGR------ 594
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + ++F EM RGI D + +++ + + +LD M G+ P
Sbjct: 595 ----VDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTI 650
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVR 147
T +++ S +E A +L ++ R
Sbjct: 651 TIRNMLTGFWSKEELERAVAMLEDLQR 677
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 145/274 (52%), Gaps = 11/274 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+S+++G+C + R + A +M+ER V P+ VT+N+L++G+ +
Sbjct: 150 PNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSK---------- 199
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A+ VF+ M +G+EP+V +++ ++ Y + + N M KG P+V +
Sbjct: 200 EGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRS 259
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++K C GRI++A+ LL EM ++P TY+ K + A KL +M+
Sbjct: 260 YNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMR 319
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L +P++ TY+I++ +D E+ ++ S++ ++ YT+LI G+C K
Sbjct: 320 SYGL-LPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKL 378
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ A + F + KG+ P VT+ + GL++ +
Sbjct: 379 EAARELFSNLFVKGIQPDVVTYTVMISGLLKGGL 412
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 152/321 (47%), Gaps = 46/321 (14%)
Query: 2 PNVKMYTSLIYGWCKINR--IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE 59
P+V T LI +C N A LG M + G++PN VT++ LLNG+ +A
Sbjct: 8 PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAK----- 62
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
I +A K+FDEM G EPDV ++S +++ + +++ L M+EKG P V
Sbjct: 63 -----IIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNV 117
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y++++ LC I +A E L EMV G+SP+ TY+ + +N A L++Q
Sbjct: 118 VVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQ 177
Query: 180 MKEDDL------------------------CV----------PNIHTYNILIGMFMALNR 205
M E ++ CV PN++TYN L+ + + ++
Sbjct: 178 MVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQ 237
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
MD ++++N + + SY +LI G C+ + EA EM K L P VT+ T
Sbjct: 238 MDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYST 297
Query: 266 LYRGLIQSDMLRTWRRLKKKL 286
L +G Q + ++L +++
Sbjct: 298 LMKGFCQDGRPQDAQKLLEEM 318
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 139/290 (47%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I G CK+ MA + L +M E+G +PNVV Y+ +++ +C+
Sbjct: 80 PDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCK---------- 129
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K I A + EM RGI P+V ++S +LH + + + M E+ + P T
Sbjct: 130 DKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVT 189
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V L G I +A+ + M+ GV P+ TYN Y + + A KL+ M
Sbjct: 190 FNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMV 249
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P++ +YNILI R+D + + + L D +Y+ L+ G C+ +
Sbjct: 250 RKG-CAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRP 308
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++A + EM GLLP +T+ + GL + L L K + E I
Sbjct: 309 QDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKI 358
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 11/230 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ Y LI G CK RID A+ L EM + + P+ VTY+ L+ G C+ P
Sbjct: 255 PSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDG--RP---- 308
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A+K+ +EMR G+ PD+ ++SIVL + + + L M+E I P +
Sbjct: 309 ----QDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFI 364
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ +C+ G++E A EL + G+ P TY +N A +L+R M
Sbjct: 365 YTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMA 424
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
C+PN TYN++I F+ + + G D ++ ML
Sbjct: 425 VHG-CLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 10/157 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y+ ++ G CK +D A L M E +EPN+ Y +L+ G+C L
Sbjct: 324 LPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEA--- 380
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++F + V+GI+PDV ++++++ + + + M G P
Sbjct: 381 -------ARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSC 433
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
TY +++ G +A L+ EMV G S + T+
Sbjct: 434 TYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTF 470
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 25/120 (20%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
PN+ +YT LI G C +++ A + +G++P+VVTY V+++G+
Sbjct: 360 PNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACEL 419
Query: 51 -RRASLH---PNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R ++H PN I NA ++ +EM RG D ++F ++ + SR
Sbjct: 420 FRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESR 479
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 151/315 (47%), Gaps = 27/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +I G+C R A+R L EM+ER + PNVVTYN L+N + F
Sbjct: 286 PNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKF-----F 340
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A +++DEM RGI P+ +++ ++ + + + + D M KG P V T
Sbjct: 341 E-----AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 395
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ C RI+D ELL EM R G+ + TYN + D N A+ L +QM
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD-----------SYTM 230
+C P+I T N L+ ++ E++ ++ S++ LD +Y +
Sbjct: 456 SSGVC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNI 514
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKK 285
LI GL + K+ EA + + EM +G++P +T+ ++ GL + L ++ K
Sbjct: 515 LICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 574
Query: 286 LDEESITFGSEFQNY 300
+TF + Y
Sbjct: 575 FSPNVVTFNTLINGY 589
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 22/281 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y S+I G+CK +R+D AE M +G P+V T+ L++G C
Sbjct: 355 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCG--------- 405
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K I + ++ EM RG+ + +++ ++H + +LD M G+CP +
Sbjct: 406 -AKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV 464
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVR-----------NGVSPSAETYNCFFKEYRGRKD 169
T +++ LC G+++DA E+ M + NGV P TYN
Sbjct: 465 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGK 524
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A +LY +M + VP+ TY+ +I +R+D +++ + ++ ++
Sbjct: 525 FLEAEELYEEMPHRGI-VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFN 583
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
LI+G C+ + + + F EM +G++ + + TL G
Sbjct: 584 TLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGF 624
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 135/312 (43%), Gaps = 51/312 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + L+ ++ R D+ +M + + ++ ++ +L+ C + L
Sbjct: 78 LPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLP---- 133
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTV 119
A F ++ G+ PDV +F+ +LH H+ +LD + IC P V
Sbjct: 134 ------FALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFH-----QICRPDV 182
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+T+++ LC GR+ +A LL MV NG+ P TY F D A+ L R+
Sbjct: 183 LTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRK 242
Query: 180 MKE---------------DDLC--------------------VPNIHTYNILIGMFMALN 204
M+E D LC PNI TYN +IG F
Sbjct: 243 MEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISG 302
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
R + + + ++ ++ +Y LI+ ++ K+ EA + + EM+ +G++P +T+
Sbjct: 303 RWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYN 362
Query: 265 TLYRGLIQSDML 276
++ G + D L
Sbjct: 363 SMIDGFCKQDRL 374
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 36/234 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+ N Y +LI+G+C + ++ A +MI GV P++VT N LL+G+C L
Sbjct: 425 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 484
Query: 56 ---------------HPNERFEKTIRN----------------AEKVFDEMRVRGIEPDV 84
HP E + AE++++EM RGI PD
Sbjct: 485 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 544
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++S ++ + + + M K P V T+ +++ C GR++D EL E
Sbjct: 545 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 604
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
M R G+ A Y +R + NGA+ ++++M + I N+L G
Sbjct: 605 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 658
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 112/272 (41%), Gaps = 53/272 (19%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + +A +F +M P V F+ ++ R +P L + M+ K I + ++
Sbjct: 60 KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++KC CSC ++ A G++ + G+ P T+ + A+ L+ Q
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQ--- 176
Query: 183 DDLCVPNIHTYNILI-------------------------------GMFM---------- 201
+C P++ T+ L+ G F+
Sbjct: 177 --ICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234
Query: 202 -ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
ALN + + EI +H+K + + Y+ +I GLC+ + ++ F+EM +KG+ P
Sbjct: 235 SALNLLRKMEEI-SHIKPNVV-----IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNI 288
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
VT+ + G S +RL +++ E I+
Sbjct: 289 VTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 10/180 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI G + AE EM RG+ P+ +TY+ +++G+C+++ L
Sbjct: 507 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD----- 561
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F M + P+V +F+ +++ Y +A + L+ M +GI
Sbjct: 562 -----EATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAII 616
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ G I A ++ EM+ +GV P T + +++ A+ + ++
Sbjct: 617 YITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+S+I G CK +R+D A + M + PNVVT+N L+NG C+
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGR------ 594
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + ++F EM RGI D + +++ + + +LD M G+ P
Sbjct: 595 ----VDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTI 650
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEM 145
T +++ S +E A +L ++
Sbjct: 651 TIRNMLTGFWSKEELERAVAMLEDL 675
>gi|357141094|ref|XP_003572081.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Brachypodium distachyon]
Length = 541
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 139/267 (52%), Gaps = 11/267 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + Y L+ GW R++ E+ EM GV VV+Y L+ +C HP++
Sbjct: 186 PDERTYNMLLDGWSSARRLEKVEKLWAEMRLAGVRSTVVSYGTLIKALCMMQ--HPDK-- 241
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + DEMR +GIE ++ + + +++ + A + Q + L G+ P ++T
Sbjct: 242 ------AASLLDEMREQGIEANLLTCNPIVYSLALAGRFQDAYKLLEKFPLYGVAPNIST 295
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S+V C G + A +L M+ G+ P+A+TYN FF + + M LY +M
Sbjct: 296 FNSLVLGYCKYGDLAGASSVLKAMIGRGILPTAKTYNYFFVFFAKTCNVELGMNLYNKMV 355
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ TYN+LI M NR+++V ++ +K S DL + TMLIH LC ++
Sbjct: 356 NNGY-APDQITYNLLIKMLCEANRLELVVQMIKEMKTSGFESDLATSTMLIHLLCRSHQF 414
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYR 268
+EAC F +M +GL+PQ +T+ L +
Sbjct: 415 EEACVEFEDMFRRGLVPQYITYRMLMK 441
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + SL+ G+CK + A L MI RG+ P TYN F
Sbjct: 291 PNISTFNSLVLGYCKYGDLAGASSVLKAMIGRGILPTAKTYNYFF------------VFF 338
Query: 62 EKT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
KT + ++++M G PD ++++++ + A++ +L + + MK G +
Sbjct: 339 AKTCNVELGMNLYNKMVNNGYAPDQITYNLLIKMLCEANRLELVVQMIKEMKTSGFESDL 398
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR 165
AT T ++ LC + E+A +M R G+ P TY KE +
Sbjct: 399 ATSTMLIHLLCRSHQFEEACVEFEDMFRRGLVPQYITYRMLMKEIK 444
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P K Y + K +++ +M+ G P+ +TYN+L+ +C R
Sbjct: 325 LPTAKTYNYFFVFFAKTCNVELGMNLYNKMVNNGYAPDQITYNLLIKMLCE------ANR 378
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + ++ EM+ G E D+ + ++++H+ R+H+ + + + M +G+ P
Sbjct: 379 LELVV----QMIKEMKTSGFESDLATSTMLIHLLCRSHQFEEACVEFEDMFRRGLVPQYI 434
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEM 145
TY ++K + G +E E+L M
Sbjct: 435 TYRMLMKEIKRLGLVELVEKLTNLM 459
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+E L P+ TYN+L+ + + R++ V ++W ++ + + + SY LI LC Q
Sbjct: 179 EEGTLPAPDERTYNMLLDGWSSARRLEKVEKLWAEMRLAGVRSTVVSYGTLIKALCMMQH 238
Query: 241 WKEACQYFVEMIEKGL 256
+A EM E+G+
Sbjct: 239 PDKAASLLDEMREQGI 254
>gi|15228788|ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 143/255 (56%), Gaps = 11/255 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YT L+ GWC++ + A R +MI+ G++P++V +NV+L G+ R S+ +
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR--SMKKS--- 350
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+F M+ +G P+V S++I++ + + + +++ + M + G+ P A
Sbjct: 351 -----DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 405
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + +++ ELL EM G P +TYN K +K ++Y +M
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMI 465
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++++ P+IHT+N+++ + +M R +W+ + + D +SYT+LI GL + K
Sbjct: 466 QNEI-EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 524
Query: 242 KEACQYFVEMIEKGL 256
+EAC+Y EM++KG+
Sbjct: 525 REACRYLEEMLDKGM 539
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PNV+ YT +I +CK + ++ A + +M++ G++P+ Y L+ G + L
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 56 --------HPNE-----------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
HP + +K + +++++M IEP + +F++++ Y
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 485
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A ++ + M +KGICP +YT +++ L S G+ +A L EM+ G+
Sbjct: 486 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 545
Query: 157 YNCFFKEY 164
YN F ++
Sbjct: 546 YNKFAADF 553
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 8/232 (3%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---KPQLSLDKLNFMKEKGICPTV 119
K + A +F+ M+ + V + + +L RA + Q+ DKL KE+ P +
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL---KER-FTPNM 298
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYT ++ C + +A + +M+ +G+ P +N + + A+KL+
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHV 358
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
MK C PN+ +Y I+I F + M+ E ++ + S L D YT LI G ++
Sbjct: 359 MKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 417
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K + EM EKG P T+ L + + M R+ K+ + I
Sbjct: 418 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 469
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 100/267 (37%), Gaps = 39/267 (14%)
Query: 59 ERFEKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
ERF + A + F R G +++ ++ + ++ + + + L M KG+
Sbjct: 169 ERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL- 227
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T+ T+T +K + + A + M + ET NC K A L+
Sbjct: 228 TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 287
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL------------ 225
++KE PN+ TY +L+ + + + IWN + L D+
Sbjct: 288 DKLKER--FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR 345
Query: 226 -----------------------DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
SYT++I C++ + A +YF +M++ GL P
Sbjct: 346 SMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 405
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEE 289
+ L G L T L K++ E+
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEK 432
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 25/181 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC-RRASLHPNER 60
P+ +YT LI G+ ++D L EM E+G P+ TYN L+ + ++ H
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ K I+N V+DEM +GI PD S+++++
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 520
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + + L M +KG+ + Y G+ E EEL +G +AE
Sbjct: 521 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEI 580
Query: 157 Y 157
+
Sbjct: 581 F 581
>gi|15241508|ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis thaliana]
gi|332004697|gb|AED92080.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 143/255 (56%), Gaps = 11/255 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YT L+ GWC++ + A R +MI+ G++P++V +NV+L G+ R S+ +
Sbjct: 295 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR--SMKKS--- 349
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+F M+ +G P+V S++I++ + + + +++ + M + G+ P A
Sbjct: 350 -----DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 404
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + +++ ELL EM G P +TYN K +K ++Y +M
Sbjct: 405 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMI 464
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++++ P+IHT+N+++ + +M R +W+ + + D +SYT+LI GL + K
Sbjct: 465 QNEI-EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 523
Query: 242 KEACQYFVEMIEKGL 256
+EAC+Y EM++KG+
Sbjct: 524 REACRYLEEMLDKGM 538
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PNV+ YT +I +CK + ++ A + +M++ G++P+ Y L+ G + L
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 424
Query: 56 --------HPNE-----------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
HP + +K + +++++M IEP + +F++++ Y
Sbjct: 425 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 484
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A ++ + M +KGICP +YT +++ L S G+ +A L EM+ G+
Sbjct: 485 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 544
Query: 157 YNCFFKEY 164
YN F ++
Sbjct: 545 YNKFAADF 552
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 125/292 (42%), Gaps = 19/292 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ + Y S++ K + + L EM +G+ + T+ + + +A ER
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAM-----KAFAAAKER-- 244
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---KPQLSLDKLNFMKEKGICPTV 119
+ A +F+ M+ + V + + +L RA + Q+ DKL KE+ P +
Sbjct: 245 ---KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL---KER-FTPNM 297
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYT ++ C + +A + +M+ +G+ P +N + + A+KL+
Sbjct: 298 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHV 357
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
MK C PN+ +Y I+I F + M+ E ++ + S L D YT LI G ++
Sbjct: 358 MKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 416
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K + EM EKG P T+ L + + M R+ K+ + I
Sbjct: 417 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 468
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 39/267 (14%)
Query: 59 ERFEKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
ERF + A + F R G D +++ ++ + ++ + + + L M KG+
Sbjct: 168 ERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL- 226
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T+ T+T +K + + A + M + ET NC K A L+
Sbjct: 227 TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 286
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL------------ 225
++KE PN+ TY +L+ + + + IWN + L D+
Sbjct: 287 DKLKER--FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR 344
Query: 226 -----------------------DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
SYT++I C++ + A +YF +M++ GL P
Sbjct: 345 SMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 404
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEE 289
+ L G L T L K++ E+
Sbjct: 405 YTCLITGFGTQKKLDTVYELLKEMQEK 431
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 25/181 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC-RRASLHPNER 60
P+ +YT LI G+ ++D L EM E+G P+ TYN L+ + ++ H
Sbjct: 400 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ K I+N V+DEM +GI PD S+++++
Sbjct: 460 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 519
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + + L M +KG+ + Y G+ E EEL +G +AE
Sbjct: 520 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEI 579
Query: 157 Y 157
+
Sbjct: 580 F 580
>gi|7340725|emb|CAB82968.1| putative protein [Arabidopsis thaliana]
Length = 308
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 140/255 (54%), Gaps = 11/255 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YT L+ GWC++ + A R +MI+ G++P++V +NV+L G+ R
Sbjct: 5 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS----- 59
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+F M+ +G P+V S++I++ + + + +++ + M + G+ P A
Sbjct: 60 -----DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 114
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + +++ ELL EM G P +TYN K +K ++Y +M
Sbjct: 115 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMI 174
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++++ P+IHT+N+++ + +M R +W+ + + D +SYT+LI GL + K
Sbjct: 175 QNEI-EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 233
Query: 242 KEACQYFVEMIEKGL 256
+EAC+Y EM++KG+
Sbjct: 234 REACRYLEEMLDKGM 248
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PNV+ YT +I +CK + ++ A + +M++ G++P+ Y L+ G + L
Sbjct: 75 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 134
Query: 56 --------HPNE-----------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
HP + +K + +++++M IEP + +F++++ Y
Sbjct: 135 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 194
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A ++ + M +KGICP +YT +++ L S G+ +A L EM+ G+
Sbjct: 195 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 254
Query: 157 YNCFFKEY 164
YN F ++
Sbjct: 255 YNKFAADF 262
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 1/175 (0%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P + TYT ++ C + +A + +M+ +G+ P +N + + A+KL
Sbjct: 5 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 64
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+ MK C PN+ +Y I+I F + M+ E ++ + S L D YT LI G
Sbjct: 65 FHVMKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 123
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++K + EM EKG P T+ L + + M R+ K+ + I
Sbjct: 124 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 178
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 25/181 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC-RRASLHPNER 60
P+ +YT LI G+ ++D L EM E+G P+ TYN L+ + ++ H
Sbjct: 110 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 169
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ K I+N V+DEM +GI PD S+++++
Sbjct: 170 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 229
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + + L M +KG+ + Y G+ E EEL +G +AE
Sbjct: 230 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEI 289
Query: 157 Y 157
+
Sbjct: 290 F 290
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 137/290 (47%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I G CK+ MA + L +M E+G +PNVV YN +++ +C+
Sbjct: 43 PDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCK---------- 92
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A F EM GI PDV ++S +LH + + + M E+ + P T
Sbjct: 93 DRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVT 152
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T ++ LC I +A + M G+ P TYN Y R + A KL+ M
Sbjct: 153 FTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMD 212
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN+ +YNILI R+D + + + L D+ +Y+ L+ G C+ +
Sbjct: 213 RKG-CAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRP 271
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+EA + EM GLLP +T+ + GL + L L K + E I
Sbjct: 272 QEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKI 321
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 144/274 (52%), Gaps = 11/274 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+S+++G+C + R++ A +M+ER V PN VT+ +L++G+C++
Sbjct: 113 PDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKK--------- 163
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I A VF+ M +G+EPDV +++ ++ Y + + N M KG P V +
Sbjct: 164 -RMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRS 222
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C GRI++A+ LL EM ++P TY+ + + A +L ++M
Sbjct: 223 YNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMC 282
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L +PN+ TY+I++ +D E+ ++ S++ ++ YT+LI G+C K
Sbjct: 283 SYGL-LPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKL 341
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ A + F + KG+ P VT+ + GL++ +
Sbjct: 342 EAARELFSNLFVKGIQPTVVTYTVMISGLLKGGL 375
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 143/273 (52%), Gaps = 11/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +T LI G CK I A M E+G+EP+V TYN L++G C R+ +
Sbjct: 147 IPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMD---- 202
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A+K+F+ M +G P+V S++I+++ + ++ + + L M K + P +
Sbjct: 203 ------EAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIF 256
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+++++ C GR ++A+ELL EM G+ P+ TY+ + A +L + M
Sbjct: 257 TYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAM 316
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+E + PNI Y ILI +++ RE+++++ + + +YT++I GL +
Sbjct: 317 QESKI-EPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGL 375
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EAC+ F EM G LP T+ + +G +++
Sbjct: 376 SNEACELFREMAVNGCLPNSCTYNVIIQGFLRN 408
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 44/291 (15%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M + G++P +VT+N LL+G+C +A I +A K+FDEM G EPDV ++S
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAK----------IMDAVKLFDEMVKMGHEPDVITYST 50
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+++ + ++L L M+EKG P V Y +++ LC + +A + EMV+ G
Sbjct: 51 IINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEG 110
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--------------DDLCV-------- 187
+ P TY+ + N A L++QM E D LC
Sbjct: 111 IPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAW 170
Query: 188 ------------PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
P+++TYN L+ + + ++MD ++++N + ++ SY +LI+G
Sbjct: 171 LVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGH 230
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
C+ + EA EM K L P T+ TL RG Q + + L K++
Sbjct: 231 CKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEM 281
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 11/230 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV+ Y LI G CK RID A+ L EM + + P++ TY+ L+ G C+ P E
Sbjct: 218 PNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVG--RPQE-- 273
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+++ EM G+ P++ ++SIVL + + + L M+E I P +
Sbjct: 274 ------AQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFI 327
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ +C+ G++E A EL + G+ P+ TY +N A +L+R+M
Sbjct: 328 YTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMA 387
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
+ C+PN TYN++I F+ + + G D ++ ML
Sbjct: 388 VNG-CLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 143/293 (48%), Gaps = 11/293 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT LI C R+ A L +M+ RG +PNVVTY VLL +C+ N F
Sbjct: 140 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCK------NSGF 193
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A V DEMR +G P++ +++++++ R + + D LN + G P +
Sbjct: 194 EQ----AMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVS 249
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++K LC+ R +D EEL EM+ P+ T++ + + A+++ +QM
Sbjct: 250 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMT 309
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + C N NI+I R+D + N++ D SYT ++ GLC ++W
Sbjct: 310 EHE-CATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERW 368
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
+A + EM+ P +VTF T L Q ++ L +++ E T G
Sbjct: 369 NDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVG 421
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 142/351 (40%), Gaps = 64/351 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PNV YT L+ CK + + A L EM +G PN+VTYNV++NG+CR +
Sbjct: 175 PNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDL 234
Query: 56 ---------HPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P+ T+ + E++F EM + P+ +F +++ + R
Sbjct: 235 LNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCR 294
Query: 97 AHKPQLSLDKLNFMKE--------------KGIC---------------------PTVAT 121
+ ++ L M E IC P +
Sbjct: 295 GGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTIS 354
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+V+K LC R DA+ELL EMVRN P+ T+N F + A+ L QM+
Sbjct: 355 YTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQ 414
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C + TYN L+ F +D E++ + + +YT L+ GLC ++
Sbjct: 415 EHG-CTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP---NTITYTTLLTGLCNAERL 470
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + EM+ + P VTF L Q L L +++ E T
Sbjct: 471 DAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCT 521
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 117/292 (40%), Gaps = 50/292 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + T LI C+ R A R L G +V YN L+ G CR L R
Sbjct: 73 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR- 131
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + P T
Sbjct: 132 -----------------------------------------------LIGSMPVAPDAYT 144
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ LC GR+ DA LL +M+R G P+ TY + AM + +M+
Sbjct: 145 YTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMR 204
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PNI TYN++I R+D R++ N + D SYT L+ GLC ++W
Sbjct: 205 AKG-CTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRW 263
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKKKLDEESIT 292
+ + F EM+EK +P +VTF+ L R + M+ R + L++ + E T
Sbjct: 264 DDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECAT 315
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 139/324 (42%), Gaps = 34/324 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-----RA--- 53
P+ YT+L+ G C R D E EM+E+ PN VT+++L+ CR RA
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 304
Query: 54 --SLHPNERFEKT---------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ +E T + +A K + M G PD S++ VL R
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCR 364
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + + L M P T+ + + LC G IE A L+ +M +G + T
Sbjct: 365 AERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVT 424
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + + A++L+R M C PN TY L+ R+D E+ +
Sbjct: 425 YNALVNGFCVQGHIDSALELFRSMP----CKPNTITYTTLLTGLCNAERLDAAAELVAEM 480
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS--- 273
+ ++ ++ +L++ C+K EA + +M+E G P +T+ TL+ G+ +
Sbjct: 481 LHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSS 540
Query: 274 -DMLRTWRRL-KKKLDEESITFGS 295
D L L K + + ITF S
Sbjct: 541 EDALELLHGLVSKGVSPDVITFSS 564
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+L+ G C R+D A + EM+ R PNVVT+NVL+N C++ L
Sbjct: 452 PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLD----- 506
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ ++M G P++ +++ + ++ + +L+ L+ + KG+ P V T
Sbjct: 507 -----EAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVIT 561
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++S++ L R+E+A ++ G+ P A YN R + + A+ M
Sbjct: 562 FSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMV 621
Query: 182 EDDLCVPNIHTYNILI 197
+ C+PN TY ILI
Sbjct: 622 SNG-CMPNESTYIILI 636
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 120/272 (44%), Gaps = 14/272 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + +I CK R+D A +FL M G P+ ++Y +L G+CR ER+
Sbjct: 316 NTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRA------ERWN 369
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A+++ EM P+ +F+ + + + + ++ + M+E G V TY
Sbjct: 370 ----DAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTY 425
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++V C G I+ A EL M P+ TY + + A +L +M
Sbjct: 426 NALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLH 482
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D C PN+ T+N+L+ F +D E+ + +L +Y L G+ + +
Sbjct: 483 RD-CPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSE 541
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+A + ++ KG+ P +TF ++ L + D
Sbjct: 542 DALELLHGLVSKGVSPDVITFSSIIGILSKED 573
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +Y ++ G CK + ID A FL M+ G PN TY +L+ G+ R
Sbjct: 592 PKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAR---------- 641
Query: 62 EKTIRNAEKVFDEMRVRGI 80
E ++ A+ + + RG+
Sbjct: 642 EGLLKEAQDLLSMLCSRGV 660
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 138/271 (50%), Gaps = 11/271 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ LI GWCK+ + A + + E E G EP+V TYN + C +K R
Sbjct: 318 FNILINGWCKVRNFEKARKVMEERKEHGFEPDVFTYNNFIESYCH----------DKDFR 367
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
++V +EMR G P+ +++I+L Y +A + +L++ MK+ GI P Y+S++
Sbjct: 368 KVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLM 427
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
L GR++DA E+ +M + GV TYN A++L ++M+E C
Sbjct: 428 YILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETALRLLKEMEETS-C 486
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++ TY+ L+ M RM +++ + +H+ +L D +YT+L+ L K EAC
Sbjct: 487 KPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHDLCPDRGTYTLLVQSLSNSGKLVEACT 546
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+F EM+ KG P + T + L R L ML+
Sbjct: 547 FFEEMVSKGFTPMETTVKLLTRKLEIKSMLK 577
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 111/244 (45%), Gaps = 6/244 (2%)
Query: 60 RFEKTIRNAEKV--FDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
RF K R+ + V F M G+E D + + +L + +++ + L+ K +
Sbjct: 255 RFAKAQRHEDAVEAFRGMGKYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKS-SVPL 313
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ ++ ++ C E A +++ E +G P TYN F + Y KD ++
Sbjct: 314 SSPSFNILINGWCKVRNFEKARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVL 373
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+M+ + C PN TY IL+ + ++ E + +K + D Y+ L++ L +
Sbjct: 374 EEMRGNG-CPPNAVTYTILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGK 432
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
+ K+AC+ F +M ++G++ VT+ T+ T RL K+++E S +
Sbjct: 433 AGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETALRLLKEMEETSCK--PDL 490
Query: 298 QNYH 301
Q YH
Sbjct: 491 QTYH 494
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 13/246 (5%)
Query: 21 DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80
D E F G M + GVE + N LL+ + + S I A V DE + +
Sbjct: 264 DAVEAFRG-MGKYGVEKDTAALNKLLDALVKGQS----------IEIAHNVLDEFK-SSV 311
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
SF+I+++ + + + + + KE G P V TY + ++ C +E
Sbjct: 312 PLSSPSFNILINGWCKVRNFEKARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDE 371
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
+L EM NG P+A TY Y + A++ Y +MK+D + VP+ Y+ L+ +
Sbjct: 372 VLEEMRGNGCPPNAVTYTILLLGYGKAGQLSKALEEYERMKKDGI-VPDTPFYSSLMYIL 430
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
R+ E+++ + + D+ +Y +I C K + A + EM E P
Sbjct: 431 GKAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDL 490
Query: 261 VTFETL 266
T+ L
Sbjct: 491 QTYHPL 496
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+SL+Y K R+ A +M ++GV +VVTYN +++ C H E
Sbjct: 417 VPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACA----HSKE- 471
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++ EM +PD+ ++ +L + + + ++ L+ M + +CP
Sbjct: 472 -----ETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHDLCPDRG 526
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
TYT +V+ L + G++ +A EMV G +P T
Sbjct: 527 TYTLLVQSLSNSGKLVEACTFFEEMVSKGFTPMETT 562
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 145/290 (50%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+L+ G C +R A R L +MI++ + PNV+TY+ LL+ +
Sbjct: 326 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK------- 378
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++F+EM I+PD+ ++S +++ + + + M KG V +
Sbjct: 379 ---VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 435
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R+ED +L EM + G+ + TYN + + D + A + + QM
Sbjct: 436 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 495
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I TYNIL+G ++ I+ ++ E+ LD+ +YT +I G+C+ K
Sbjct: 496 FFGIS-PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 554
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+EA F + KGL P VT+ T+ GL +L L K+ +E +
Sbjct: 555 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 604
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 139/272 (51%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + +LI+G N+ A + M+ +G +P++VTY V++NG+C+R
Sbjct: 798 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL---- 853
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M +EP V ++ ++ + +L+ M+ KGI P V T
Sbjct: 854 ------AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 907
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLC+ GR DA LL +M+ ++P T++ + A KLY +M
Sbjct: 908 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 967
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TY+ LI F +R+D ++++ + D+ +Y LI G C+ ++
Sbjct: 968 KRSI-DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 1026
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+E + F EM ++GL+ VT+ L +GL Q+
Sbjct: 1027 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 1058
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 142/288 (49%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI C R A R L +MIER + P+V T++ L++ +
Sbjct: 903 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK---------- 952
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK++DEM R I+P + ++S +++ + + + FM K P V T
Sbjct: 953 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 1012
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+E+ E+ EM + G+ + TYN + D + A +++++M
Sbjct: 1013 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 1072
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + PNI TYN L+ +++ ++ +++ S++ + +Y ++I G+C+ K
Sbjct: 1073 SDGV-PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 1131
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++ F + KG+ P V + T+ G + L K++ E+
Sbjct: 1132 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 1179
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ +I +C ++ +A LG+M++ G EP+ VT L+NG CRR +
Sbjct: 226 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR----------NRVS 275
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + D+M G +PD+ +++ ++ + + + D ++ KGI P V TYT++V
Sbjct: 276 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 335
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC+ R DA LL +M++ ++P+ TY+ + A +L+ +M +
Sbjct: 336 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI- 394
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+I TY+ LI +R+D ++++ + D+ SY LI+G C+ ++ ++ +
Sbjct: 395 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 454
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQS 273
F EM ++GL+ VT+ TL +G Q+
Sbjct: 455 LFREMSQRGLVSNTVTYNTLIQGFFQA 481
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 11/276 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+ LI +C+ +++ +A LG+M++ G EPN+VT + LLNG C K I
Sbjct: 733 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH----------SKRIS 782
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + D+M V G +P+ +F+ ++H +K ++ ++ M KG P + TY VV
Sbjct: 783 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 842
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G + A LL +M + + P YN K + A+ L+++M+ +
Sbjct: 843 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI- 901
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+ TY+ LI R + + + ++ D+ +++ LI ++ K EA +
Sbjct: 902 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 961
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ EM+++ + P VT+ +L G D L +++
Sbjct: 962 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 997
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 131/282 (46%), Gaps = 16/282 (5%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
++D A GEM++ P+++ ++ LL+ + + +F+ I E +M+
Sbjct: 675 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKM------NKFDVVISLGE----QMQNL 724
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI + ++SI+++ + R + L+L L M + G P + T +S++ C RI +A
Sbjct: 725 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 784
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ +M G P+ T+N A+ AM L +M C P++ TY +++
Sbjct: 785 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVN 843
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
D+ + N ++ +L + Y +I GLC+ + +A F EM KG+ P
Sbjct: 844 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 903
Query: 259 QKVTFETLYRGLIQ----SDMLRTWRRL-KKKLDEESITFGS 295
VT+ +L L SD R + ++K++ + TF +
Sbjct: 904 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 945
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 10/180 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y LI G + DMA+ EM+ GV PN++TYN LL+G+C+ N + E
Sbjct: 1044 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK------NGKLE 1097
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K A VF+ ++ +EP + +++I++ +A K + D + KG+ P V Y
Sbjct: 1098 K----AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 1153
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C G E+A+ L EM +G P++ YN + D + +L ++M+
Sbjct: 1154 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 1213
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 10/185 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ +V Y +LI G+CK R++ + EM +RG+ N VTYN L+ G +
Sbjct: 430 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD------ 483
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A++ F +M GI PD+ +++I+L + + +L M+++ + +
Sbjct: 484 ----VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 539
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+V++ +C G++E+A L + G+ P TY + + LY +M
Sbjct: 540 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 599
Query: 181 KEDDL 185
K++ L
Sbjct: 600 KQEGL 604
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 111/248 (44%), Gaps = 12/248 (4%)
Query: 59 ERFEKT------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
ER KT + +A +F +M P + F+ +L + K + + M+
Sbjct: 157 ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 216
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
GI + T+ V+ C C C ++ A +LG+M++ G P T + R +
Sbjct: 217 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 276
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A+ L +M E P+I YN +I R++ + + ++ + ++ +YT L+
Sbjct: 277 AVSLVDKMVEIGY-KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 335
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLD 287
+GLC +W +A + +MI+K + P +T+ L +++ + + L + +D
Sbjct: 336 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 395
Query: 288 EESITFGS 295
+ +T+ S
Sbjct: 396 PDIVTYSS 403
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 126/290 (43%), Gaps = 22/290 (7%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-----------------SLHPNERFE 62
I ++ + +M+ G P+++ + +GVC++A L N E
Sbjct: 616 ITLSAELIKKMLSCGYAPSLL--KDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSE 673
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ +A +F EM P + FS +L ++ +K + + M+ GI TY
Sbjct: 674 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 733
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ ++ C C ++ A +LG+M++ G P+ T + Y K + A+ L QM
Sbjct: 734 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 793
Query: 183 DDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
PN T+N LI G+F+ N+ + + + DL +Y ++++GLC++
Sbjct: 794 TGY-QPNTVTFNTLIHGLFLH-NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 851
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A +M + L P + + T+ GL + + L K+++ + I
Sbjct: 852 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 901
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G+C+ + A+ EM E G PN YN L+ RA L +R
Sbjct: 1148 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI-----RARLRDGDR- 1201
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
+ ++ EMR G D ++ +V ++ + LD L+
Sbjct: 1202 ----EASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 1244
>gi|297821162|ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324302|gb|EFH54723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 628
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 142/255 (55%), Gaps = 11/255 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YT L+ GWC++ + A R +MI++G++P++V +NV+L G+ R
Sbjct: 305 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLR---------- 354
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A K+F M+ +G P+V S++I++ + + + +++ + M + G+ P A
Sbjct: 355 SRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 414
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + +++ ELL EM G P +TYN K +K A ++Y +M
Sbjct: 415 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMI 474
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++++ P+IHT+N+++ + +M +W+ + + D +SYT+LI GL + K
Sbjct: 475 QNEI-EPSIHTFNMIMKSYFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIGEGKS 533
Query: 242 KEACQYFVEMIEKGL 256
+EAC+Y EM++KG+
Sbjct: 534 REACRYLEEMLDKGM 548
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PNV+ YT +I +CK + ++ A + +M++ G++P+ Y L+ G + L
Sbjct: 375 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 434
Query: 56 --------HPNE-----------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
HP + +K +A +++++M IEP + +F++++ Y
Sbjct: 435 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 494
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A ++ + M +KGICP +YT +++ L G+ +A L EM+ G+
Sbjct: 495 ARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLID 554
Query: 157 YNCFFKEY 164
YN F ++
Sbjct: 555 YNKFAADF 562
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 125/292 (42%), Gaps = 19/292 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ + Y S++ K + + L EM +G+ + T+ + + +A ER
Sbjct: 203 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAM-----KAFAAAKER-- 254
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---KPQLSLDKLNFMKEKGICPTV 119
+ A +F+ M+ + V + + +L RA + Q+ DKL KE+ P +
Sbjct: 255 ---KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL---KER-FTPNM 307
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYT ++ C + +A + +M+ G+ P +N + + + A+KL+
Sbjct: 308 MTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHV 367
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
MK C PN+ +Y I+I F + M+ E ++ + S L D YT LI G ++
Sbjct: 368 MKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 426
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K + EM EKG P T+ L + + M R+ K+ + I
Sbjct: 427 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEI 478
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 25/181 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC-RRASLHPNER 60
P+ +YT LI G+ ++D L EM E+G P+ TYN L+ + ++ H
Sbjct: 410 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 469
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ K I+N V+DEM +GI PD S+++++
Sbjct: 470 YNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIG 529
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + + L M +KG+ + Y G+ E EEL +G +AE
Sbjct: 530 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHKGGQPEIFEELAQRAKFSGKFAAAEI 589
Query: 157 Y 157
+
Sbjct: 590 F 590
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 147/287 (51%), Gaps = 12/287 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V ++++++ CK ++ A + MI+RGVEP+VVTY L++G C
Sbjct: 263 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHC---------- 312
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A KVFD M +G PDV S++ +++ Y + HK ++ M K P
Sbjct: 313 LQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTK 372
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC GR++DA L EMV G P TY+ AM L + +
Sbjct: 373 TYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAI 432
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +L P+I YNI+I ++ R++++++ L + +Y ++IHGLC++
Sbjct: 433 EASNLN-PDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 491
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD-MLRTWRRLKKKL 286
EA + F+EM P T+ T+ RG +Q++ LR + L++ L
Sbjct: 492 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEML 538
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 146/315 (46%), Gaps = 26/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI G C +I A +MI+ G +PNVVTY L+NG+C+ + R
Sbjct: 124 PDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRL 183
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
++ + A +F +M +GI PD+ +++ ++H
Sbjct: 184 LRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCN 243
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + LN M I P V +++VV LC G++ +A E++ M++ GV P T
Sbjct: 244 LCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVT 303
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + + + + A+K++ M P++ +Y LI + ++++D ++ +
Sbjct: 304 YTTLMDGHCLQSEMDEAVKVFDMMVRKGF-APDVISYTTLINGYCKIHKIDKAMYLFEEM 362
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
E D +Y L+HGLC + ++A F EM+ +G +P VT+ L L ++ L
Sbjct: 363 CRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHL 422
Query: 277 RTWRRLKKKLDEESI 291
L K ++ ++
Sbjct: 423 EEAMALLKAIEASNL 437
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT+LI G+CKI++ID A EM + P+ TYN L++G+C L
Sbjct: 334 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRL------ 387
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A +F EM RG PD+ ++SI+L + + ++ L ++ + P +
Sbjct: 388 ----QDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQV 443
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ +C G +E A +L + G+ PS TYN R N A KL+ +M
Sbjct: 444 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMD 503
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+D C P+ TYN + F+ N ++ + D+ + T+L+ L +
Sbjct: 504 GND-CSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLD 562
Query: 242 KEACQYFVEMIEK 254
+ +C + ++ +
Sbjct: 563 QSSCFLMLSVLSE 575
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 122/268 (45%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV LI +C +NR+ A L ++++ G +P+ T+ L+ G+C
Sbjct: 89 PNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC----------V 138
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A +FD+M G +P+V ++ +++ + ++ L M++ P V
Sbjct: 139 EGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVI 198
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ LC ++ +A L +MV G+SP TY + L QM
Sbjct: 199 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 258
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +P++ ++ ++ ++ EI + + + D+ +YT L+ G C + +
Sbjct: 259 NSKI-LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 317
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA + F M+ KG P +++ TL G
Sbjct: 318 DEAVKVFDMMVRKGFAPDVISYTTLING 345
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 12/275 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + L+ K+ +M GV PNV T N+L+N C H N
Sbjct: 54 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFC-----HLNR-- 106
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A V ++ G +PD T+F+ ++ K +L + M ++G P V T
Sbjct: 107 ---VGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 163
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G A LL M + P Y + A L+ QM
Sbjct: 164 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 223
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I TY L+ L V + N + S++ D+ ++ ++ LC++ K
Sbjct: 224 GQGIS-PDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKV 282
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG-LIQSDM 275
EA + MI++G+ P VT+ TL G +QS+M
Sbjct: 283 TEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 317
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 112/253 (44%), Gaps = 11/253 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N +D A ++ P++V + LL + + K + +M
Sbjct: 35 NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKM----------KHYSTVLSLSTQMDS 84
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
G+ P+V + +I+++ + ++ + L + + G P T+T++++ LC G+I +
Sbjct: 85 FGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGE 144
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A L +M+ G P+ TY + + A++L R M++ + C P++ Y +I
Sbjct: 145 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN-CQPDVVIYTSII 203
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
++ +++ + G + D+ +YT L+H LC +WK +M+ +L
Sbjct: 204 DSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKIL 263
Query: 258 PQKVTFETLYRGL 270
P V F T+ L
Sbjct: 264 PDVVIFSTVVDAL 276
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 3/155 (1%)
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP-NIHTY 193
++DA ++ PS + K + + L QM D VP N++T
Sbjct: 37 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQM--DSFGVPPNVYTL 94
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
NILI F LNR+ + + D ++T LI GLC + K EA F +MI+
Sbjct: 95 NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 154
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+G P VT+ TL GL + RL + +++
Sbjct: 155 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ 189
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 147/291 (50%), Gaps = 13/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+L+ G C R + A R L +MI+R + PNV+TY+ LL+ +
Sbjct: 223 PNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGK------- 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++F+EM I+PD+ ++S +++ + + + M KG P V +
Sbjct: 276 ---VLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVS 332
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R+ED +L +M + G+ + TYN + + D + A + + QM
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM- 391
Query: 182 EDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D V P+I TYNIL+G ++ I+ ++ SE+ LD+ +YT +I G+C+ K
Sbjct: 392 -DSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGK 450
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++A F + KGL P VT+ T+ GL + L K+ +E +
Sbjct: 451 VEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL 501
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 137/266 (51%), Gaps = 11/266 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ +I +C ++ +A LG+M++ G EP+ VT L+NG CRR +
Sbjct: 123 FNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRR----------NRVS 172
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + D+M G PD+ +++ ++ + + +LD + KGI P V TYT++V
Sbjct: 173 DAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALV 232
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC+ GR DA LL +M++ ++P+ TY+ + A +++ +M +
Sbjct: 233 NGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSI- 291
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+I TY+ LI +R+D ++++ + D+ SY LI+G C+ ++ ++ +
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMK 351
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQ 272
F +M ++GL+ VT+ TL +G Q
Sbjct: 352 LFRKMSQRGLVNNTVTYNTLIQGFFQ 377
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 146/304 (48%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + L+ K+ + D+ +M G+ ++ T+N+++N C F
Sbjct: 83 PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC--------CCF 134
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ ++ A V +M G EPD + +++ + R ++ ++ ++ M E G P +
Sbjct: 135 QVSL--ALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVA 192
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC R+ DA + E+ R G+ P+ TY N A +L R M
Sbjct: 193 YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN+ TY+ L+ F+ ++ +EI+ + + D+ +Y+ LI+GLC +
Sbjct: 253 KRKI-TPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK-LDEESITFGSE 296
EA Q F M+ KG P V++ TL G ++ D ++ +R++ ++ L ++T+ +
Sbjct: 312 DEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTL 371
Query: 297 FQNY 300
Q +
Sbjct: 372 IQGF 375
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 110/248 (44%), Gaps = 12/248 (4%)
Query: 59 ERFEKT------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
ER KT + +A +F EM P + F+ +L + K + + M+
Sbjct: 54 ERLSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEV 113
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
GI + T+ V+ C C C ++ A +LG+M++ G P T + R +
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A+ L +M E P+I YN +I R++ + + + + ++ +YT L+
Sbjct: 174 AVSLVDKMVEIGY-RPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALV 232
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLD 287
+GLC +W +A + +MI++ + P +T+ L +++ + + + + +D
Sbjct: 233 NGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSID 292
Query: 288 EESITFGS 295
+ +T+ S
Sbjct: 293 PDIVTYSS 300
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 145/290 (50%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+L+ G C +R A R L +MI++ + PNV+TY+ LL+ +
Sbjct: 223 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK------- 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++F+EM I+PD+ ++S +++ + + + M KG V +
Sbjct: 276 ---VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R+ED +L EM + G+ + TYN + + D + A + + QM
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I TYNIL+G ++ I+ ++ E+ LD+ +YT +I G+C+ K
Sbjct: 393 FFGIS-PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+EA F + KGL P VT+ T+ GL +L L K+ +E +
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ +I +C ++ +A LG+M++ G EP+ VT L+NG CRR +
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR----------NRVS 172
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + D+M G +PD+ +++ ++ + + + D ++ KGI P V TYT++V
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC+ R DA LL +M++ ++P+ TY+ + A +L+ +M +
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI- 291
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+I TY+ LI +R+D ++++ + D+ SY LI+G C+ ++ ++ +
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQS 273
F EM ++GL+ VT+ TL +G Q+
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQA 378
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 10/185 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ +V Y +LI G+CK R++ + EM +RG+ N VTYN L+ G + + +
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F F +M GI PD+ +++I+L + + +L M+++ + +
Sbjct: 387 F----------FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+V++ +C G++E+A L + G+ P TY + + LY +M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 181 KEDDL 185
K++ L
Sbjct: 497 KQEGL 501
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 111/248 (44%), Gaps = 12/248 (4%)
Query: 59 ERFEKT------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
ER KT + +A +F +M P + F+ +L + K + + M+
Sbjct: 54 ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
GI + T+ V+ C C C ++ A +LG+M++ G P T + R +
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A+ L +M E P+I YN +I R++ + + ++ + ++ +YT L+
Sbjct: 174 AVSLVDKMVEIGY-KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLD 287
+GLC +W +A + +MI+K + P +T+ L +++ + + L + +D
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 288 EESITFGS 295
+ +T+ S
Sbjct: 293 PDIVTYSS 300
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 138/290 (47%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I G CK MA +M + G +P+VVTYN +++ +C+
Sbjct: 191 PNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCK---------- 240
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + +A + EM RGI P+V +++ ++H + + + M + + P T
Sbjct: 241 DRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVT 300
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T +V LC G + +A + M GV P+ TYN Y ++ N A K++ M
Sbjct: 301 LTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMI 360
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P +H+YNILI F RMD + + + L D +Y+ L+ GLC+ +
Sbjct: 361 RQG-CAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRP 419
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
KEA F EM GLLP VT+ L G + L +L K + E+ +
Sbjct: 420 KEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL 469
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 140/304 (46%), Gaps = 44/304 (14%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV LI C++N +D A LG+M + G+ P T+N L+NG+C E
Sbjct: 122 NVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCN----------E 171
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I+ A ++F+EM RG EP+V S++ +++ + +++D M++ G P V TY
Sbjct: 172 GKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTY 231
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC + DA E L EM+ G+ P+ TYNC + N A +L+++M
Sbjct: 232 NTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVG 291
Query: 183 --------------DDLCV--------------------PNIHTYNILIGMFMALNRMDM 208
D LC PNI TYN L+ + M+
Sbjct: 292 RDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNE 351
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++++ + + SY +LI+G C+ ++ EA EM K L P VT+ TL +
Sbjct: 352 AKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQ 411
Query: 269 GLIQ 272
GL Q
Sbjct: 412 GLCQ 415
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 148/283 (52%), Gaps = 13/283 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ T L+ G CK + A M E+GVEPN+ TYN L++G C
Sbjct: 295 MPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYC---------- 344
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ + A+KVF+ M +G P V S++I+++ + ++ + + L M K + P
Sbjct: 345 LQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTV 404
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+++++ LC GR ++A + EM G+ P+ TY+ + + A+KL + M
Sbjct: 405 TYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSM 464
Query: 181 KEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+E L PNI + ILI GMF+A ++++ +E+++ + + + +YT++I GL ++
Sbjct: 465 QEKKL-EPNIVHHTILIEGMFIA-GKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEG 522
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
EA F +M + G LP ++ + +G +Q+ T RL
Sbjct: 523 LSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRL 565
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 144/288 (50%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +++G+C + +++ A R EM+ R V P+ VT +L++G+C+
Sbjct: 261 PNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCK---------- 310
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A VF+ M +G+EP++++++ ++ Y + M +G P V +
Sbjct: 311 EGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHS 370
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C R+++A+ LL EM ++P TY+ + A+ ++++M
Sbjct: 371 YNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMC 430
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L +PN+ TY+IL+ F +D ++ ++ +L ++ +T+LI G+ K
Sbjct: 431 SYGL-LPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKL 489
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
+ A + F ++ G+ P T+ + +GL++ + L +K++++
Sbjct: 490 EVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD 537
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 118/231 (51%), Gaps = 11/231 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y LI G+CK R+D A+ L EM + + P+ VTY+ L+ G+C+ P E
Sbjct: 366 PGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFG--RPKE-- 421
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F EM G+ P++ ++SI+L + + +L L M+EK + P +
Sbjct: 422 ------ALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVH 475
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T +++ + G++E A+EL ++ +G+ P+ TY K ++ A L+R+M
Sbjct: 476 HTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKM- 534
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
EDD +PN +YN++I F+ + + + G +L ++ ML+
Sbjct: 535 EDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 115/219 (52%), Gaps = 1/219 (0%)
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
++M + G+ +V S +++++ R + ++ L M + GI PT +T+ +++ LC+
Sbjct: 112 NQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNE 171
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G+I++A EL EMVR G P+ +YN + + A+ ++++M+++ C P++ T
Sbjct: 172 GKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNG-CKPDVVT 230
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
YN +I ++ E + + + ++ +Y ++HG C + EA + F EM+
Sbjct: 231 YNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMV 290
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ ++P VT L GL + M+ R + + + E+ +
Sbjct: 291 GRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGV 329
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 102/198 (51%), Gaps = 11/198 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y++L+ G C+ R A EM G+ PN+VTY++LL+G C+ L
Sbjct: 401 PDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLD----- 455
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+ M+ + +EP++ +I++ A K +++ + + + GI PT+ T
Sbjct: 456 -----EALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRT 510
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++K L G ++A +L +M +G P++ +YN + + +D++ A++L +M
Sbjct: 511 YTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV 570
Query: 182 EDDLCVPNIHTYNILIGM 199
N+ T+ +L+ +
Sbjct: 571 GKRFSA-NLSTFQMLLDL 587
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 144/288 (50%), Gaps = 12/288 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YTSL++GWC+ I AE EM G+ PNV TY+++++ +CR
Sbjct: 250 PDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQ------- 302
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A VF EM G P+ +F+ ++ V+ RA + + L N MK + T
Sbjct: 303 ---ITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLIT 359
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C + +A ++L M +N +P+A ++N F+ +D NGA +++ +MK
Sbjct: 360 YNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMK 419
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C PN TYNIL+ MF DM+ ++ + E+ + ++Y LI C W
Sbjct: 420 EVG-CKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHW 478
Query: 242 KEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
A +F EMI EK + P ++ + L ++ L+ L K+ E
Sbjct: 479 NHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVE 526
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 142/274 (51%), Gaps = 11/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V ++++++ CK ++ A + MI+RGVEP+VVTY L++G C ++ +
Sbjct: 272 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMD---- 327
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVFD M +G PDV S++ +++ Y + HK ++ M K P
Sbjct: 328 ------EAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTK 381
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC GR++DA L EMV G P TY+ + AM L + +
Sbjct: 382 TYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAI 441
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +L P+I YNI+I ++ R++++++ L + +Y ++IHGLC++
Sbjct: 442 EASNLN-PDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 500
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA + F+EM P T+ T+ RG +Q++
Sbjct: 501 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNN 534
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 122/268 (45%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV LI +C +NR+ A L ++++ G +P+ T+ L+ G+C
Sbjct: 98 PNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC----------V 147
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A +FD+M G +P+V ++ +++ + ++ L M++ P V
Sbjct: 148 EGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVI 207
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ LC ++ +A L +MV G+SP TY + L QM
Sbjct: 208 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 267
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +P++ ++ ++ ++ EI + + + D+ +YT L+ G C + +
Sbjct: 268 NSKI-LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 326
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA + F M+ KG P +++ TL G
Sbjct: 327 DEAVKVFDMMVRKGFAPDVISYTTLING 354
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 137/320 (42%), Gaps = 44/320 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YTS+I CK ++ A +M+ +G+ P++ TY L++ +C
Sbjct: 203 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW------ 256
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + ++M I PDV FS V+ + K + + ++ M ++G+ P V T
Sbjct: 257 ----KHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVT 312
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C +++A ++ MVR G +P +Y Y + AM L+ +M
Sbjct: 313 YTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMC 372
Query: 182 EDD--------------LC--------------------VPNIHTYNILIGMFMALNRMD 207
+ LC +P++ TY+IL+ ++
Sbjct: 373 RKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLE 432
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ ++ S L D+ Y ++I G+C + + A F + KGL P T+ +
Sbjct: 433 EAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 492
Query: 268 RGLIQSDMLRTWRRLKKKLD 287
GL + +L +L ++D
Sbjct: 493 HGLCKRGLLNEANKLFMEMD 512
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 12/275 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + L+ K+ +M GV PNV T N+L+N C H N
Sbjct: 63 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFC-----HLNR-- 115
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A V ++ G +PD T+F+ ++ K +L + M ++G P V T
Sbjct: 116 ---VGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 172
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G A LL M + P Y + A L+ QM
Sbjct: 173 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 232
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I TY L+ L V + N + S++ D+ ++ ++ LC++ K
Sbjct: 233 GQGIS-PDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKV 291
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG-LIQSDM 275
EA + MI++G+ P VT+ TL G +QS+M
Sbjct: 292 TEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 326
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 112/254 (44%), Gaps = 11/254 (4%)
Query: 17 INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR 76
N +D A ++ P++V + LL + + K + +M
Sbjct: 43 FNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKM----------KHYSTVLSLSTQMD 92
Query: 77 VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
G+ P+V + +I+++ + ++ + L + + G P T+T++++ LC G+I
Sbjct: 93 SFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIG 152
Query: 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
+A L +M+ G P+ TY + + A++L R M++ + C P++ Y +
Sbjct: 153 EALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN-CQPDVVIYTSI 211
Query: 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
I ++ +++ + G + D+ +YT L+H LC +WK +M+ +
Sbjct: 212 IDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI 271
Query: 257 LPQKVTFETLYRGL 270
LP V F T+ L
Sbjct: 272 LPDVVIFSTVVDAL 285
>gi|449466251|ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 146/287 (50%), Gaps = 14/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ + L+ GW + AE F EMIE GV+P+VV+YN L++ C+ N
Sbjct: 211 PNLQTFNILLSGW---KSSEEAEGFFDEMIEMGVKPDVVSYNCLVDVYCK------NREM 261
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K A KV +MR I DV +++ ++ +P + + L MKE G P VA
Sbjct: 262 DK----AFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAA 317
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + ++ C R+ +A +LL EMV G+SP+A TYN FF+ + D A LYR+M
Sbjct: 318 YNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMM 377
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C+PN + L+ +F + +M E+WN + G + L LC+ K
Sbjct: 378 -DTGCLPNTQSCLFLVRLFKKYEKEEMALELWNDMIQKGFGSYILVSEELFDLLCDLGKL 436
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
EA F++M++KG P +F+ + + ++ + L KK+D+
Sbjct: 437 IEAESCFLQMVDKGHKPSYTSFKRIKVLMELANKHEALQNLSKKMDD 483
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 141/293 (48%), Gaps = 11/293 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT LI C R+ A L +M+ RG +PNVVTY VLL +CR N F
Sbjct: 141 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR------NSGF 194
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A V DEMR +G P++ +++++++ R + + + LN + G P +
Sbjct: 195 EQ----AMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVS 250
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++K LC+ R +D EEL EM+ P+ T++ + + A+++ QM
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT 310
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C N NI+I R+D ++ N + D SYT ++ GLC ++W
Sbjct: 311 EHG-CATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERW 369
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
+A + EM+ P +VTF T L Q ++ L +++ E T G
Sbjct: 370 DDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVG 422
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 129/291 (44%), Gaps = 14/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+L+ G C R D E EM+E+ PN VT+++L+ CR
Sbjct: 246 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGG-------- 297
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +V ++M G + T +IV++ + + + LN M G P +
Sbjct: 298 --MVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTIS 355
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+V+K LC R +DA+ELL EMVRN P+ T+N F + A+ L QM
Sbjct: 356 YTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMS 415
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C + TYN L+ F +D E++ + + +YT L+ GLC ++
Sbjct: 416 EHG-CTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP---NTITYTTLLTGLCNAERL 471
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + EM+ P VTF L Q L L +++ E T
Sbjct: 472 DGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCT 522
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 117/298 (39%), Gaps = 49/298 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + T LI C+ R A R L G +V YN L+ G CR L R
Sbjct: 74 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR- 132
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + P T
Sbjct: 133 -----------------------------------------------LIGSMPVAPDAYT 145
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ LC GR+ DA LL +M+R G P+ TY + AM + +M+
Sbjct: 146 YTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMR 205
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PNI TYN++I R+D RE+ N + D SYT L+ GLC ++W
Sbjct: 206 AKG-CTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRW 264
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ + F EM+EK +P +VTF+ L R + M+ ++ +++ E + N
Sbjct: 265 DDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCN 322
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 135/320 (42%), Gaps = 49/320 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+++ G C+ R D A+ L EM+ PN VT+N + +C++
Sbjct: 351 PDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKG-------- 402
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + ++M G V +++ +++ + +L+ M K P T
Sbjct: 403 --LIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTIT 457
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC+ R++ A EL+ EM+R P+ T+N + + A++L QM
Sbjct: 458 YTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMM 517
Query: 182 EDDLCVPNIHTYNIL-----------------------------------IGMFMALNRM 206
E C PN+ TYN L IG+ +R+
Sbjct: 518 EHG-CTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRI 576
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++++ V+ + Y ++ GLC++ + A +F M+ G +P + T+ L
Sbjct: 577 EEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIIL 636
Query: 267 YRGLIQSDMLRTWRRLKKKL 286
GL +L+ + L L
Sbjct: 637 IEGLAHEGLLKEAQDLLSVL 656
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 146/296 (49%), Gaps = 19/296 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +LI G+CK+ +ID + L M +G+EPN+++YNV++NG+CR
Sbjct: 237 LPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR--------- 287
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E ++ V EM RG D +++ ++ Y + +L M G+ P+V
Sbjct: 288 -EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS++ +C G + A E L +M G+ P+ TY + + N A ++ R+M
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ P++ TYN LI +M+ + +K L D+ SY+ ++ G C
Sbjct: 407 NDNGFS-PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD--EESITFG 294
EA + EM+EKG+ P +T+ +L +G + RR K+ D EE + G
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ------RRTKEACDLYEEMLRVG 515
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 143/303 (47%), Gaps = 32/303 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + YT+L+ G+ + ++ A R L EM + G P+VVTYN L+NG C +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM------ 431
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A V ++M+ +G+ PDV S+S VL + R++ +L M EKGI P T
Sbjct: 432 ----EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S+++ C R ++A +L EM+R G+ P TY Y D A++L+ +M
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVRE--------IWNHVKGSEL----------GL 223
E + +P++ TY++LI LN+ RE + S++ +
Sbjct: 548 EKGV-LPDVVTYSVLIN---GLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
+ S LI G C K EA Q F M+ K P + + G ++ +R L
Sbjct: 604 EFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLY 663
Query: 284 KKL 286
K++
Sbjct: 664 KEM 666
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 146/341 (42%), Gaps = 52/341 (15%)
Query: 1 MPNVKMYTSLIYGWCKINR-IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE 59
MP V Y +++ + R I AE EM+E V PNV TYN+L+ G C
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFC--------- 216
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
F I A +FD+M +G P+V +++ ++ Y + K L M KG+ P +
Sbjct: 217 -FAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL 275
Query: 120 ATYTSVVKCLCSCGRIEDAEELL-----------------------------------GE 144
+Y V+ LC GR+++ +L E
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
M+R+G++PS TY + N AM+ QM+ LC PN TY L+ F
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC-PNERTYTTLVDGFSQKG 394
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
M+ + + + + +Y LI+G C K ++A +M EKGL P V++
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 265 TLYRGLIQS----DMLRTWRRL-KKKLDEESITFGSEFQNY 300
T+ G +S + LR R + +K + ++IT+ S Q +
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 27/286 (9%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----------------RA 53
++ + +++ ID A + G P V++YN +L+ R +
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 54 SLHPNER----------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLS 103
+ PN F I A +FD+M +G P+V +++ ++ Y + K
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 104 LDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163
L M KG+ P + +Y V+ LC GR+++ +L EM R G S TYN K
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 164 YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223
Y + + A+ ++ +M L P++ TY LI M+ E + ++ L
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGL-TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ +YT L+ G +K EA + EM + G P VT+ L G
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 99/228 (43%), Gaps = 41/228 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
P+ YT+LI +C ++ A + EM+E+GV P+VVTY+VL+NG+ +++
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 54 --------SLHPNERFEKTIRN------------------------AEKVFDEMRVRGIE 81
S+ + + I N A++VF+ M + +
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
PD T+++I++H + RA + + M + G T ++VK L G++ + +
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
+ ++R+ AE + + + + + +M +D +PN
Sbjct: 698 IVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF-LPN 744
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 11/191 (5%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF-KEYRGRKDANGAMKL 176
T + + VVK I+ A ++ +G P +YN R +++ + A +
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+++M E + PN+ TYNILI F +D+ +++ ++ ++ +Y LI G C
Sbjct: 193 FKEMLESQVS-PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-------SDMLRTWRRLKKKLDEE 289
+ +K + + M KGL P +++ + GL + S +L R LDE
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE- 310
Query: 290 SITFGSEFQNY 300
+T+ + + Y
Sbjct: 311 -VTYNTLIKGY 320
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 145/272 (53%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI+G N+ A + +M++RG +P++VTY ++NG+C+R
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD------- 238
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + ++M I+ +V F+ ++ + ++++D M+ KGI P V T
Sbjct: 239 ---IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ CLC+ GR DA LL M+ ++P+ T+N + A KL+ +M
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+ TYN+LI F NR+D ++++ + + ++ +Y LI+G C+ ++
Sbjct: 356 QRSI-DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ + F EM ++GL+ VT+ T+ +G Q+
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 145/289 (50%), Gaps = 16/289 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI C R A R L M+E+ + PNVVT+N L++ +
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK---------- 340
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK+ +EM R I+PD +++++++ + ++ + FM K P + T
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT 400
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C C R+ED EL EM + G+ + TY + + D + A +++QM
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 182 EDDLCVP-NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ VP +I TY+IL+ + ++D I+ +++ SE+ L++ Y +I G+C+ K
Sbjct: 461 SNR--VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
EA F + K P VT+ T+ GL +L+ L +K+ E+
Sbjct: 519 VGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 143/304 (47%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +SL+ G+C RI A + +M+E G +P+ T+ L++G+ LH N+
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL----FLH-NKAS 205
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A + D+M RG +PD+ ++ V++ + L+L+ LN M+ I V
Sbjct: 206 E-----AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ LC +E A +L EM G+ P+ TYN + A +L M
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + PN+ T+N LI F ++ ++ + + D +Y +LI+G C +
Sbjct: 321 EKKIN-PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK-LDEESITFGSE 296
EA Q F M+ K LP T+ TL G + D + +R + ++ L ++T+ +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 297 FQNY 300
Q +
Sbjct: 440 IQGF 443
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 16/284 (5%)
Query: 17 INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR 76
I ++D A G+M++ P++V +N LL+ V + +FE I E +M+
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM------NKFELVISLGE----QMQ 110
Query: 77 VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
GI D+ ++SI ++ + R + L+L L M + G P + T +S++ C RI
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
DA L+ +MV G P T+ A+ A+ L QM + C P++ TY +
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTV 229
Query: 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
+ +D+ + N ++ + + ++ + +I LC+ + + A F EM KG+
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 257 LPQKVTFETLYRGLIQ----SDMLRTWRR-LKKKLDEESITFGS 295
P VT+ +L L SD R L+KK++ +TF +
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 136/297 (45%), Gaps = 16/297 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + L+ K+N+ ++ +M G+ ++ TY++ +N CRR+ L
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSL---- 136
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V +M G EPD+ + S +L+ Y + + ++ ++ M E G P T
Sbjct: 137 ------ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ L + +A L+ +MV+ G P TY R D + A+ L +M+
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ N+ +N +I +++ +++ ++ + ++ +Y LI+ LC +W
Sbjct: 251 AARI-KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITF 293
+A + M+EK + P VTF L + L +L ++ +D ++IT+
Sbjct: 310 SDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN++ Y +LI G+CK R++ EM +RG+ N VTY ++ G +
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD---- 450
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A+ VF +M + D+ ++SI+LH K +L ++++ + +
Sbjct: 451 ------SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++++ +C G++ +A +L + + P TYN ++ A L+R+M
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Query: 181 KEDDLCVPNIHTYNILI 197
KED +PN TYN LI
Sbjct: 562 KEDG-TLPNSGTYNTLI 577
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G C + A+ +M E G PN TYN L+ RA+L +R
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI-----RANLRDCDR- 586
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK 111
+ ++ EMR G D ++ S+V ++ H +L LN +
Sbjct: 587 ----AASAELIKEMRSSGFVGDASTISLVTNML---HDGRLDKSFLNMLS 629
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 145/268 (54%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G+CK ++ A+ L EM+ + + PN +T+N+L++G CR
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCR---------- 311
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A+KVF+EM+ +G++P+V +++ +++ K +L + M G+ P V T
Sbjct: 312 DENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVT 371
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +++A E+L ++ + G++P+ T+N Y + A L M
Sbjct: 372 YNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML 431
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +C PN+ TYN LI F + R++ ++G+ L DL +Y +L+ LC+K +
Sbjct: 432 DTGVC-PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGET 490
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
++A + EM E GL P +T+ L G
Sbjct: 491 RKAVRLLDEMFEVGLNPSHLTYNALIDG 518
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 136/265 (51%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI G C ++D A +M G++PNVVTYN L+NG C++
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKK--------- 382
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K ++ A ++ D++ RG+ P+V +F+ ++ Y +A + + + M + G+CP V+T
Sbjct: 383 -KMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C G +++A +L EM NG+ TYN + + A++L +M
Sbjct: 442 YNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMF 501
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L P+ TYN LI + + ++ ++ +Y +LI G C K K
Sbjct: 502 EVGLN-PSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKL 560
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+EA + EM+EKGL+P + T++ L
Sbjct: 561 EEANRLLNEMLEKGLIPNRTTYDIL 585
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 126/257 (49%), Gaps = 11/257 (4%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
L++ + K +D+A + G + ++ N +L + + E I E
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVK----------EGRIGVVE 214
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
V+ EM R I +V +F +V++ + K Q + D + MK G P+V TY +++
Sbjct: 215 SVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGY 274
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C G++ A+ LL EMV + P+ T+N + ++ A K++ +M+ L PN
Sbjct: 275 CKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGL-QPN 333
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+ TYN LI + ++D + + + G L ++ +Y LI+G C+K+ KEA +
Sbjct: 334 VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393
Query: 250 EMIEKGLLPQKVTFETL 266
++ ++GL P +TF TL
Sbjct: 394 DIGKRGLAPNVITFNTL 410
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 128/282 (45%), Gaps = 11/282 (3%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
++ K RI + E EMI R + NVVT++V++NG+C+ +F+K A
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVG------KFQK----AG 249
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
V ++M+ G P V +++ ++ Y +A K + L M K I P T+ ++
Sbjct: 250 DVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF 309
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C + A+++ EM R G+ P+ TYN + A+ L +M L PN
Sbjct: 310 CRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGL-KPN 368
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+ TYN LI F + RE+ + + L ++ ++ LI + + +A
Sbjct: 369 VVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRS 428
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
M++ G+ P T+ L G + ++ R+L K+++ +
Sbjct: 429 MMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M + I V T+ V+ LC G+ + A +++ +M G SPS TYN Y
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A L ++M + PN T+NILI F + ++++ ++ L ++ +Y
Sbjct: 280 MFKADALLKEMVAKRIH-PNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYN 338
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KK 284
LI+GLC K EA +M GL P VT+ L G + ML+ R + K+
Sbjct: 339 SLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKR 398
Query: 285 KLDEESITFGSEFQNY 300
L ITF + Y
Sbjct: 399 GLAPNVITFNTLIDAY 414
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 145/290 (50%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+L+ G C +R A R L +MI++ + PNV+TY+ LL+ +
Sbjct: 223 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK------- 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++F+EM I+PD+ ++S +++ + + + M KG V +
Sbjct: 276 ---VLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R+ED +L EM + G+ + TYN + + D + A + + QM
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I TYNIL+G ++ I+ ++ E+ LD+ +YT +I G+C+ K
Sbjct: 393 FFGIS-PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+EA F + KGL P VT+ T+ GL +L L K+ +E +
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ +I +C ++ +A LG+M++ G EP+ VT L+NG CRR +
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR----------NRVS 172
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + D+M G +PD+ +++ ++ + + + D ++ KGI P V TYT++V
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC+ R DA LL +M++ ++P+ TY+ + A +L+ +M +
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI- 291
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+I TY+ L+ +R+D ++++ + D+ SY LI+G C+ ++ ++ +
Sbjct: 292 DPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQS 273
F EM ++GL+ VT+ TL +G Q+
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQA 378
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 10/185 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ +V Y +LI G+CK R++ + EM +RG+ N VTYN L+ G + + +
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F F +M GI PD+ +++I+L + + +L M+++ + +
Sbjct: 387 F----------FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+V++ +C G++E+A L + G+ P TY + + LY +M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 181 KEDDL 185
K++ L
Sbjct: 497 KQEGL 501
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 111/248 (44%), Gaps = 12/248 (4%)
Query: 59 ERFEKT------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
ER KT + +A +F +M P + F+ +L + K + + M+
Sbjct: 54 ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
GI + T+ V+ C C C ++ A +LG+M++ G P T + R +
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A+ L +M E P+I YN +I R++ + + ++ + ++ +YT L+
Sbjct: 174 AVSLVDKMVEIGY-KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLD 287
+GLC +W +A + +MI+K + P +T+ L +++ + + L + +D
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 288 EESITFGS 295
+ +T+ S
Sbjct: 293 PDIVTYSS 300
>gi|449511317|ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 146/287 (50%), Gaps = 14/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ + L+ GW + AE F EMIE GV+P+VV+YN L++ C+ N
Sbjct: 211 PNLQTFNILLSGW---KSSEEAEGFFDEMIEMGVKPDVVSYNCLVDVYCK------NREM 261
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K A KV +MR I DV +++ ++ +P + + L MKE G P VA
Sbjct: 262 DK----AFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAA 317
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + ++ C R+ +A +LL EMV G+SP+A TYN FF+ + D A LYR+M
Sbjct: 318 YNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMM 377
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C+PN + L+ +F + +M E+WN + G + L LC+ K
Sbjct: 378 -DTGCLPNTQSCLFLVRLFKKYEKEEMALELWNDMIQKGFGSYILVSEELFDLLCDLGKL 436
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
EA F++M++KG P +F+ + + ++ + L KK+D+
Sbjct: 437 IEAESCFLQMVDKGHKPSYTSFKRIKVLMELANKHEALQNLSKKMDD 483
>gi|147782978|emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
Length = 708
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 129/261 (49%), Gaps = 15/261 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y L +GWC++ R L EMIE G P+ TYN ++ C+
Sbjct: 380 PDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAG-------- 431
Query: 62 EKTIRNAEKVFDEMRVRGI---EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ A ++F+ MR +G P +++I++ ++ + + + M G+ P
Sbjct: 432 --MVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPD 489
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V+TY V++ +C G++E+A + L EM G P TYNCF K + A+ LY
Sbjct: 490 VSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYG 549
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M E CVP++HT+N+LI MF + D E W+ + D D+Y ++I GL
Sbjct: 550 RMIEAG-CVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNC 608
Query: 239 QKWKEACQYFVEMIEKGL-LP 258
K ++AC E+I KG+ LP
Sbjct: 609 NKMEDACFLLDEVINKGIKLP 629
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +I G C +++ A +FL EM +G P++VTYN L+ +C N++
Sbjct: 487 LPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCE------NKK 540
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ + ++ M G P V +F++++ ++ +P + + + M ++G
Sbjct: 541 SEEAL----GLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTD 596
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ L +C ++EDA LL E++ G+ ++CF + D KL M
Sbjct: 597 TYCVMIEGLFNCNKMEDACFLLDEVINKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHM 656
Query: 181 KE 182
++
Sbjct: 657 RK 658
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 11/229 (4%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ +A+ +F ++ + ++PD +++I+ + R P + L M E G P TY +
Sbjct: 364 VEDAQAMFRRVKNK-VKPDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNT 422
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGV---SPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ C G + +A EL M G SP+A+TY KL + M
Sbjct: 423 AIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMI 482
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P++ TY +I GM +A +++ + + D+ +Y + LCE +K
Sbjct: 483 NSGV-LPDVSTYKQVIEGMCLA-GKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKK 540
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK 285
+EA + MIE G +P TF L + TW + K+
Sbjct: 541 SEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKR 589
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 87/219 (39%), Gaps = 52/219 (23%)
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGI----CPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++L Y+ H L F K+K I P + ++ LC C +EDA+ +
Sbjct: 318 MILRKYTEKHLAHLH----KFAKKKKIRVKTQPEINALNLLLDALCKCSLVEDAQAMF-R 372
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--------------DDLC---- 186
V+N V P A TYN F + ++ + M++ +M E D C
Sbjct: 373 RVKNKVKPDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGM 432
Query: 187 -------------------VPNIHTYNILIGMFMALNRMDMVREIWNHVK---GSELGLD 224
P TY I+I +AL + D E + +K S + D
Sbjct: 433 VTEATELFEFMRTKGSTMSSPTAKTYAIMI---LALVQSDRTEECFKLIKDMINSGVLPD 489
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
+ +Y +I G+C K +EA ++ EM KG P VT+
Sbjct: 490 VSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTY 528
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 147/290 (50%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +LI+G N+ A + M+ RG +P++ TY ++NG+C+R
Sbjct: 184 PDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD------- 236
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + +M IE +V ++ ++ + + D N M+ KGI P V T
Sbjct: 237 ---IDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 293
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ CLC+ GR DA LL +M+ ++P+ T+N + A KL+ +M
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 353
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PNI TYN LI F +R+D ++I+ + + D+ +Y LI G C+ ++
Sbjct: 354 QRSI-DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRV 412
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+E + F EM ++GL+ VT+ TL +GL Q+ +++ KK+ + +
Sbjct: 413 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 462
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 145/288 (50%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y SLI C R A R L +MIER + PNVVT+N L++ +
Sbjct: 289 PDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAK---------- 338
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK+FDEM R I+P++ +++ +++ + + + M K P V T
Sbjct: 339 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 398
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+E+ EL EM + G+ + TYN + D + A K++++M
Sbjct: 399 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 458
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + P+I TY+IL+ +++ ++ +++ S++ ++ +Y ++I G+C+ K
Sbjct: 459 SDGV-PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKV 517
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++ F + KG+ P + + T+ G + + L +++ E+
Sbjct: 518 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 565
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 136/304 (44%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++ L+ K+N+ D+ +M G+ N TY++LLN CRR+ L
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPL---- 134
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V +M G EPD+ + S +L+ Y + ++ ++ M E G P T
Sbjct: 135 ------ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVT 188
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ L + +A L+ MV G P TY R D + A+ L ++M+
Sbjct: 189 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 248
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + N+ YN +I MD +++N ++ + D+ +Y LI LC +W
Sbjct: 249 KGKI-EANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRW 307
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSE 296
+A + +MIE+ + P VTF +L + L +L ++ +D +T+ S
Sbjct: 308 SDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 367
Query: 297 FQNY 300
+
Sbjct: 368 INGF 371
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 133/276 (48%), Gaps = 11/276 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+ L+ +C+ +++ +A LG+M++ G EP++VT + LLNG C K I
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCH----------GKRIS 168
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + D+M G +PD +F+ ++H +K ++ ++ M +G P + TY +VV
Sbjct: 169 EAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 228
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G I+ A LL +M + + + YN K + A L+ +M+ +
Sbjct: 229 NGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI- 287
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++ TYN LI R + + + ++ ++ ++ LI ++ K EA +
Sbjct: 288 KPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEK 347
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
F EMI++ + P VT+ +L G D L +++
Sbjct: 348 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +LI G+CK R++ EM +RG+ N VTYN L+ G+ +
Sbjct: 393 LPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM--- 449
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A+K+F +M G+ PD+ ++SI+L + K + +L ++++ + P +
Sbjct: 450 -------AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIY 502
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYR 178
TY +++ +C G++ED +L + GV P+ Y + +G K+ A L+R
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA--LFR 560
Query: 179 QMKEDDLCVPNIHTYNILI 197
+MKED +P+ YN LI
Sbjct: 561 EMKEDG-TLPDSGCYNTLI 578
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y +LI G + DMA++ +M+ GV P+++TY++LL+G+C+ L
Sbjct: 430 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE------ 483
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A VF+ ++ +EP++ +++I++ +A K + D + KG+ P V Y
Sbjct: 484 ----KALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 539
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ C G E+A+ L EM +G P + YN + D + +L ++M+
Sbjct: 540 TTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRS 599
Query: 183 DDLCVPNIHTYNILIGMF 200
V + T +++I M
Sbjct: 600 CGF-VGDASTISMVINML 616
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 130/282 (46%), Gaps = 16/282 (5%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
++D A GEM++ P+++ ++ LL+ + + +F+ I E +M+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKM------NKFDVVISLGE----QMQNL 110
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI + ++SI+L+ + R + L+L L M + G P + T +S++ C RI +A
Sbjct: 111 GIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 170
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ +MV G P T+N A+ A+ L +M C P++ TY ++
Sbjct: 171 VALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDLFTYGTVVN 229
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
+D+ + ++ ++ ++ Y +I GLC+ + +A F +M KG+ P
Sbjct: 230 GLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 289
Query: 259 QKVTFETLYRGLIQ----SDMLRTWRRL-KKKLDEESITFGS 295
T+ +L L SD R + ++K++ +TF S
Sbjct: 290 DVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNS 331
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +I G CK +++ + +GV+PNV+ Y +++G CR+
Sbjct: 499 PNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG-------- 550
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ +F EM+ G PD ++ ++ R S + + M+ G +T
Sbjct: 551 --LKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 608
Query: 122 YTSVVKCLCSCGRIEDA 138
+ V+ L GR+E +
Sbjct: 609 ISMVINMLHD-GRLEKS 624
>gi|356560073|ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 131/263 (49%), Gaps = 15/263 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + Y ++GWC++ + L EM+E G P+ YN ++ C+
Sbjct: 164 PNAETYNIFVFGWCRVRNPTRGMKLLEEMVELGHRPDNFAYNTAIDTYCKAG-------- 215
Query: 62 EKTIRNAEKVFDEMRVRGIE---PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ A +F+ MR +G P +++I++ ++ + + + M G P
Sbjct: 216 --MVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVALAQHDRMEECFKLIGHMISSGCLPD 273
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V TY +++ +C CG+I++A + L EM P TYNCF K K + A+KLY
Sbjct: 274 VTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYG 333
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M E + C+P++ TYN+LI MF ++ D E W + D+D+Y+++I GL
Sbjct: 334 RMIELN-CIPSVQTYNMLISMFFEIDDPDGAFETWQEMDNRGCRPDIDTYSVMIDGLFNC 392
Query: 239 QKWKEACQYFVEMIEKGL-LPQK 260
K ++AC E+I KG+ LP K
Sbjct: 393 NKVEDACFLLEEVINKGIKLPYK 415
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 115/294 (39%), Gaps = 60/294 (20%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + + L+ CK ++ AE +M + V+PN TYN+ + G CR
Sbjct: 130 PEINAFNLLLDALCKCCLVEDAETLYKKM-RKTVKPNAETYNIFVFGWCR---------- 178
Query: 62 EKTIRNAE---KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-- 116
+RN K+ +EM G PD +++ + Y +A ++D FM+ KG
Sbjct: 179 ---VRNPTRGMKLLEEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSIS 235
Query: 117 -PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
PT TY ++ L R+E+ +L+G M+ +G
Sbjct: 236 SPTAKTYAIIIVALAQHDRMEECFKLIGHMISSG-------------------------- 269
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
C+P++ TY +I ++D + + D+ +Y + L
Sbjct: 270 ----------CLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVL 319
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD----MLRTWRRLKKK 285
C+ +K ++A + + MIE +P T+ L + D TW+ + +
Sbjct: 320 CDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETWQEMDNR 373
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 10/182 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +I G C +ID A +FL EM + P++VTYN L +C
Sbjct: 271 LPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCD--------- 321
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K +A K++ M P V ++++++ ++ P + + M +G P +
Sbjct: 322 -NKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETWQEMDNRGCRPDID 380
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+ ++ L +C ++EDA LL E++ G+ + ++ F + D ++ M
Sbjct: 381 TYSVMIDGLFNCNKVEDACFLLEEVINKGIKLPYKKFDSFLMQLSVIGDLQAIHRVSEHM 440
Query: 181 KE 182
++
Sbjct: 441 RK 442
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 101/256 (39%), Gaps = 48/256 (18%)
Query: 31 IERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIV 90
I +P + +N+LL+ +C+ + +AE ++ +MR + ++P+ +++I
Sbjct: 124 IRVKTQPEINAFNLLLDALCKCC----------LVEDAETLYKKMR-KTVKPNAETYNIF 172
Query: 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+ + R P + L M E G P Y + + C G + +A +L M G
Sbjct: 173 VFGWCRVRNPTRGMKLLEEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGS 232
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
S S+ P TY I+I +RM+
Sbjct: 233 SISS---------------------------------PTAKTYAIIIVALAQHDRMEECF 259
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ H+ S D+ +Y +I G+C K EA ++ EM K P VT+ + L
Sbjct: 260 KLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVL 319
Query: 271 IQS----DMLRTWRRL 282
+ D L+ + R+
Sbjct: 320 CDNKKSEDALKLYGRM 335
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 138/287 (48%), Gaps = 11/287 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT +I G C R+ A L +M+ RG +P+VVTY VLL VC+
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG----- 197
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +V DEMR +G P++ +++++++ R + + + LN + G P +
Sbjct: 198 -----QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+V+K LC+ R ED EEL EM+ P+ T++ + + A+++ QM
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C N NI+I R+D + N++ D SYT ++ GLC ++W
Sbjct: 313 GHG-CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 371
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
++A + EM+ K P +VTF T L Q ++ L +++ E
Sbjct: 372 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 418
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 139/316 (43%), Gaps = 29/316 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PN+ Y +I G C+ R+D A FL + G +P+ V+Y +L G+C
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272
Query: 52 -----RASLHPNE-RFEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ PNE F+ +R A +V ++M G + T +IV++ +
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + LN M G P +YT+V+K LC R EDA+ELL EMVR P+ T
Sbjct: 333 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 392
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N F + A L QM E C NI TYN L+ F R+D E++ +
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHG-CEVNIVTYNALVNGFCVQGRVDSALELFYSM 451
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ +YT L+ GLC ++ A + EM++K P VTF L Q ++
Sbjct: 452 PCKP---NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508
Query: 277 RTWRRLKKKLDEESIT 292
L +++ E T
Sbjct: 509 DEAIELVEQMMEHGCT 524
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 16/262 (6%)
Query: 17 INRIDMAE--RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
I R D+AE R + RG P+V L+ +CRR R +R AE+
Sbjct: 54 IARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAAR---VLRAAER---- 106
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
G DV +++ ++ Y R QL + + + P TYT +++ LC GR
Sbjct: 107 ---SGTAVDVFAYNTLVAGYCRYG--QLDAAR-RLIASMPVAPDAYTYTPIIRGLCDRGR 160
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+ +A LL +M+ G PS TY + AM++ +M+ C PNI TYN
Sbjct: 161 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG-CTPNIVTYN 219
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
++I R+D RE N + D SYT ++ GLC ++W++ + F EM+EK
Sbjct: 220 VIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279
Query: 255 GLLPQKVTFETLYRGLIQSDML 276
+P +VTF+ L R + M+
Sbjct: 280 NCMPNEVTFDMLVRFFCRGGMV 301
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 142/287 (49%), Gaps = 18/287 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + + I C+ I+ A + +M E G E N+VTYN L+NG C
Sbjct: 388 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC----------V 437
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + +A ++F M + P+ +++ +L A + + + L M +K P V T
Sbjct: 438 QGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 494
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V C G +++A EL+ +M+ +G +P+ TYN ++ A++L +
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLV 554
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEKQ 239
+ + P+I TY+ +IG+ +R++ ++++ V+ +LG+ + Y ++ LC++
Sbjct: 555 SNGV-SPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ--DLGMRPKAVIYNKILLALCKRC 611
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A +F M+ G +P ++T+ TL GL D L+ R L ++L
Sbjct: 612 NTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 14/270 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN + L+ +C+ ++ A + L +M G N N+++N +C++
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR------ 335
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +A + + M G PD S++ VL RA + + + + L M K P
Sbjct: 336 ----VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 391
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ + + LC G IE A L+ +M +G + TYN + + + A++L+ M
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C PN TY L+ R+D E+ + + ++ ++ +L+ C+K
Sbjct: 452 P----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 507
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA + +M+E G P +T+ TL G+
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGI 537
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 138/287 (48%), Gaps = 11/287 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT +I G C R+ A L +M+ RG +P+VVTY VLL VC+
Sbjct: 174 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG----- 228
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +V DEMR +G P++ +++++++ R + + + LN + G P +
Sbjct: 229 -----QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 283
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+V+K LC+ R ED EEL EM+ P+ T++ + + A+++ QM
Sbjct: 284 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 343
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C N NI+I R+D + N++ D SYT ++ GLC ++W
Sbjct: 344 GHG-CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 402
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
++A + EM+ K P +VTF T L Q ++ L +++ E
Sbjct: 403 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 449
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 139/316 (43%), Gaps = 29/316 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PN+ Y +I G C+ R+D A FL + G +P+ V+Y +L G+C
Sbjct: 244 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 303
Query: 52 -----RASLHPNE-RFEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ PNE F+ +R A +V ++M G + T +IV++ +
Sbjct: 304 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 363
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + LN M G P +YT+V+K LC R EDA+ELL EMVR P+ T
Sbjct: 364 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 423
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N F + A L QM E C NI TYN L+ F R+D E++ +
Sbjct: 424 FNTFICILCQKGLIEQATMLIEQMSEHG-CEVNIVTYNALVNGFCVQGRVDSALELFYSM 482
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ +YT L+ GLC ++ A + EM++K P VTF L Q ++
Sbjct: 483 PCKP---NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 539
Query: 277 RTWRRLKKKLDEESIT 292
L +++ E T
Sbjct: 540 DEAIELVEQMMEHGCT 555
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 117/254 (46%), Gaps = 14/254 (5%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82
A R + RG P+V L+ +CRR R +R AE+ G
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARV---LRAAER-------SGTAV 142
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
DV +++ ++ Y R QL + + + P TYT +++ LC GR+ +A LL
Sbjct: 143 DVFAYNTLVAGYCRYG--QLDAAR-RLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLL 199
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
+M+ G PS TY + AM++ +M+ C PNI TYN++I
Sbjct: 200 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG-CTPNIVTYNVIINGMCR 258
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
R+D RE N + D SYT ++ GLC ++W++ + F EM+EK +P +VT
Sbjct: 259 EGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVT 318
Query: 263 FETLYRGLIQSDML 276
F+ L R + M+
Sbjct: 319 FDMLVRFFCRGGMV 332
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 142/287 (49%), Gaps = 18/287 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + + I C+ I+ A + +M E G E N+VTYN L+NG C
Sbjct: 419 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC----------V 468
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + +A ++F M + P+ +++ +L A + + + L M +K P V T
Sbjct: 469 QGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 525
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V C G +++A EL+ +M+ +G +P+ TYN ++ A++L +
Sbjct: 526 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV 585
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEKQ 239
+ + P+I TY+ +IG+ +R++ ++++ V+ +LG+ + Y ++ LC++
Sbjct: 586 SNGV-SPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ--DLGMRPKAVIYNKILLALCKRC 642
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A +F M+ G +P ++T+ TL GL D L+ R L ++L
Sbjct: 643 NTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 689
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 14/272 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN + L+ +C+ ++ A + L +M G N N+++N +C++
Sbjct: 313 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR------ 366
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +A + + M G PD S++ VL RA + + + + L M K P
Sbjct: 367 ----VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 422
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ + + LC G IE A L+ +M +G + TYN + + + A++L+ M
Sbjct: 423 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 482
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C PN TY L+ R+D E+ + + ++ ++ +L+ C+K
Sbjct: 483 P----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 538
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA + +M+E G P +T+ TL G+ +
Sbjct: 539 MDEAIELVEQMMEHGCTPNLITYNTLLDGITK 570
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 138/287 (48%), Gaps = 11/287 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT +I G C R+ A L +M+ RG +P+VVTY VLL VC+
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG----- 197
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +V DEMR +G P++ +++++++ R + + + LN + G P +
Sbjct: 198 -----QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+V+K LC+ R ED EEL EM+ P+ T++ + + A+++ QM
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C N NI+I R+D + N++ D SYT ++ GLC ++W
Sbjct: 313 GHG-CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 371
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
++A + EM+ K P +VTF T L Q ++ L +++ E
Sbjct: 372 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 418
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 139/316 (43%), Gaps = 29/316 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PN+ Y +I G C+ R+D A FL + G +P+ V+Y +L G+C
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272
Query: 52 -----RASLHPNE-RFEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ PNE F+ +R A +V ++M G + T +IV++ +
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + LN M G P +YT+V+K LC R EDA+ELL EMVR P+ T
Sbjct: 333 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVT 392
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N F + A L QM E C NI TYN L+ F R+D E++ +
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHG-CEVNIVTYNALVNGFCVQGRVDSALELFYSM 451
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ +YT L+ GLC ++ A + EM++K P VTF L Q ++
Sbjct: 452 PCKP---NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508
Query: 277 RTWRRLKKKLDEESIT 292
L +++ E T
Sbjct: 509 DEAIELVEQMMEHGCT 524
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 16/262 (6%)
Query: 17 INRIDMAE--RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
I R D+AE R + RG P+V L+ +CRR R +R AE+
Sbjct: 54 IARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAAR---VLRAAER---- 106
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
G DV +++ ++ Y R QL + + + P TYT +++ LC GR
Sbjct: 107 ---SGTAVDVFAYNTLVAGYCRYG--QLDAAR-RLIASMPVAPDAYTYTPIIRGLCDRGR 160
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+ +A LL +M+ G PS TY + AM++ +M+ C PNI TYN
Sbjct: 161 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG-CTPNIVTYN 219
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
++I R+D RE N + D SYT ++ GLC ++W++ + F EM+EK
Sbjct: 220 VIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279
Query: 255 GLLPQKVTFETLYRGLIQSDML 276
+P +VTF+ L R + M+
Sbjct: 280 NCMPNEVTFDMLVRFFCRGGMV 301
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 142/287 (49%), Gaps = 18/287 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + + I C+ I+ A + +M E G E N+VTYN L+NG C
Sbjct: 388 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC----------V 437
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + +A ++F M + P+ +++ +L A + + + L M +K P V T
Sbjct: 438 QGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 494
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V C G +++A EL+ +M+ +G +P+ TYN ++ A++L +
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV 554
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEKQ 239
+ + P+I TY+ +IG+ +R++ ++++ V+ +LG+ + Y ++ LC++
Sbjct: 555 SNGV-SPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ--DLGMRPKAVIYNKILLALCKRC 611
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A +F M+ G +P ++T+ TL GL D L+ R L ++L
Sbjct: 612 NTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 14/272 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN + L+ +C+ ++ A + L +M G N N+++N +C++
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR------ 335
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +A + + M G PD S++ VL RA + + + + L M K P
Sbjct: 336 ----VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 391
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ + + LC G IE A L+ +M +G + TYN + + + A++L+ M
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C PN TY L+ R+D E+ + + ++ ++ +L+ C+K
Sbjct: 452 P----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGL 507
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA + +M+E G P +T+ TL G+ +
Sbjct: 508 MDEAIELVEQMMEHGCTPNLITYNTLLDGITK 539
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 140/287 (48%), Gaps = 11/287 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + LI C RI A +M+ RG P+VVTY++LL+ C+
Sbjct: 249 PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCK---------- 298
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E R A + DEMR +G EPD+ +++++++ +L+ L+ + G P T
Sbjct: 299 ESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVT 358
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT V+K LC R ++ EELL EM N +P T+N + + A+++ M
Sbjct: 359 YTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMS 418
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E CV +I TY+ ++ + R+D E+ + +K D +YT ++ GLC ++W
Sbjct: 419 EHG-CVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQW 477
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ A + EM+ P +VTF T+ L Q ++ R+ +++ E
Sbjct: 478 ERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSE 524
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 11/275 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT ++ C R E L EM P+ VT+N ++ +C++
Sbjct: 354 PDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQG-------- 405
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +V D M G D+ ++S +L + +++ L+ +K G P
Sbjct: 406 --LVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIA 463
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+V+K LCS + E AEEL+ EM+ + P T+N + + A+++ QM
Sbjct: 464 YTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMS 523
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ C P+I TYN +I + +D E+ + ++ D+ ++ L+ GLC +W
Sbjct: 524 ENG-CSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRW 582
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
++A Q M+ P ++TF T+ L Q +L
Sbjct: 583 EDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLL 617
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 139/298 (46%), Gaps = 13/298 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+++ G C + + AE + EM+ P+ VT+N ++ +C++
Sbjct: 459 PDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKG-------- 510
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +V ++M G PD+ +++ ++ +++ L+ ++ G P + T
Sbjct: 511 --LVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVT 568
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++K LC R EDAE+L+ M+R+ P T+N + A++ + M
Sbjct: 569 FNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMA 628
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ CVPN TY+I++ + + E+ + + DL +Y +I L + K
Sbjct: 629 ENG-CVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGT--PDLITYNTVISNLTKAGKM 685
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+EA M+ GL P T+ +L G+ + D R+ +++ + ++ + F N
Sbjct: 686 EEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYN 743
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 76/195 (38%), Gaps = 33/195 (16%)
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLG------------------------------ 143
G TV TY ++V C GRIEDA L+
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAV 273
Query: 144 --EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
+M+ G SPS TY+ AM L +M+ C P+I TYN+LI
Sbjct: 274 FDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKG-CEPDIVTYNVLINAMC 332
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
+D I +++ D +YT ++ LC ++WKE + EM P +V
Sbjct: 333 NEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEV 392
Query: 262 TFETLYRGLIQSDML 276
TF T+ L Q ++
Sbjct: 393 TFNTIVTSLCQQGLV 407
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 96/219 (43%), Gaps = 24/219 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
P++ + +L+ G C ++R + AE+ + M+ P+ +T+N ++ +C++ L
Sbjct: 564 PDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIET 623
Query: 57 ----------PNERFEKTIRNA-------EKVFDEMR-VRGIEPDVTSFSIVLHVYSRAH 98
PN + +A + + + + PD+ +++ V+ ++A
Sbjct: 624 LKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAG 683
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
K + +LD L M G+CP TY S+ +C + A +L + G+SP YN
Sbjct: 684 KMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYN 743
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
+ + + A+ + M C+P+ TY IL+
Sbjct: 744 DVLLGFCRDRRTDLAIDCFAHMVSSG-CMPDESTYVILL 781
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++I K +++ A L M+ G+ P+ TY L GVCR +
Sbjct: 667 PDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCRE------DGT 720
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ +R +V D G+ PD T ++ VL + R + L++D M G P +T
Sbjct: 721 DRAVRMLRRVQDT----GLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDEST 776
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
Y +++ L G +++A+ LL + GV
Sbjct: 777 YVILLEALAYGGLLDEAKRLLASLCSLGV 805
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 7/155 (4%)
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
CP V ++K LCS GR+ DAE + + G S + TYN Y A +
Sbjct: 184 CPPVVPCNILIKRLCSDGRVSDAERVFAAL---GPSATVVTYNTMVNGYCRAGRIEDARR 240
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
L M P+ T+N LI R+ +++ + + +Y++L+
Sbjct: 241 LINGMPFP----PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDAT 296
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
C++ +++A EM KG P VT+ L +
Sbjct: 297 CKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAM 331
>gi|225427504|ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Vitis vinifera]
Length = 709
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 129/261 (49%), Gaps = 15/261 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y L +GWC++ R L EMIE G P+ TYN ++ C+
Sbjct: 407 PDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAG-------- 458
Query: 62 EKTIRNAEKVFDEMRVRGI---EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ A ++F+ MR +G P +++I++ ++ + + + M G+ P
Sbjct: 459 --MVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPD 516
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V+TY V++ +C G++E+A + L EM G P TYNCF K + A+ LY
Sbjct: 517 VSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYG 576
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M E CVP++HT+N+LI MF + D E W+ + D D+Y ++I GL
Sbjct: 577 RMIEAG-CVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNC 635
Query: 239 QKWKEACQYFVEMIEKGL-LP 258
K ++AC E++ KG+ LP
Sbjct: 636 NKMEDACFLLDEVVNKGIKLP 656
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +I G C +++ A +FL EM +G P++VTYN L+ +C N++
Sbjct: 514 LPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCE------NKK 567
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ + ++ M G P V +F++++ ++ +P + + + M ++G
Sbjct: 568 SEEAL----GLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTD 623
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ L +C ++EDA LL E+V G+ ++CF + D KL M
Sbjct: 624 TYCVMIEGLFNCNKMEDACFLLDEVVNKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHM 683
Query: 181 KE 182
++
Sbjct: 684 RK 685
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 11/229 (4%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ +A+ +F ++ + ++PD +++I+ + R P + L M E G P TY +
Sbjct: 391 VEDAQAMFRRVKNK-VKPDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNT 449
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGV---SPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ C G + +A EL M G SP+A+TY KL + M
Sbjct: 450 AIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMI 509
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P++ TY +I GM +A +++ + + D+ +Y + LCE +K
Sbjct: 510 NSGV-LPDVSTYKQVIEGMCLA-GKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKK 567
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK 285
+EA + MIE G +P TF L + TW + K+
Sbjct: 568 SEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKR 616
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 16/301 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV LI C++N +D + LG+M + G+ P+ +T+N L+NG+C E
Sbjct: 127 NVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCN----------E 176
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I+ A ++F+EM RG EP+V S++ V++ + +++D M++ G P V TY
Sbjct: 177 GKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTY 236
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++++ LC + DA E L EMV G+ P+ TYN + N A +L+++M
Sbjct: 237 STIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVG 296
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D+ +PN T+ IL+ + R ++ + + D+ +Y L+ G C ++
Sbjct: 297 RDV-MPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMN 355
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEF 297
EA + F MI KG P ++ L G +S + + L K L+ +++T+ +
Sbjct: 356 EAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 415
Query: 298 Q 298
Q
Sbjct: 416 Q 416
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 147/283 (51%), Gaps = 13/283 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN +T L+ G CK + A M E+GVEP++ TYN L++G C
Sbjct: 300 MPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYC---------- 349
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ + A+KVF+ M +G P S++I+++ Y ++ + + L M K + P
Sbjct: 350 LQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTV 409
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+++++ LC GR ++A L EM G P+ TY + + A+KL + M
Sbjct: 410 TYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSM 469
Query: 181 KEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
KE L PNI Y ILI GMF+A ++++ +E+++ + G D+ +YT++I GL ++
Sbjct: 470 KEKKL-EPNIVHYTILIEGMFIA-GKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEG 527
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
EA F +M + G LP ++ + +G +Q+ T RL
Sbjct: 528 LSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRL 570
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 136/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT++I G CK MA +M + G +PNVVTY+ +++ +C+
Sbjct: 196 PNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCK---------- 245
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + +A + EM RGI P+V +++ ++H + + + M + + P T
Sbjct: 246 DRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVT 305
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T +V LC G + +A + M GV P TYN Y ++ N A K++ M
Sbjct: 306 FTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMI 365
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P H+YNILI + RMD + + + L D +Y+ L+ GLC+ +
Sbjct: 366 RKG-CAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRP 424
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
KEA F EM G P VT+ L G + L +L K + E+ +
Sbjct: 425 KEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKL 474
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 142/292 (48%), Gaps = 19/292 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y S+++G+C + +++ A R EM+ R V PN VT+ +L++G+C+
Sbjct: 266 PNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCK---------- 315
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A VF+ M +G+EPD+++++ ++ Y + M KG P +
Sbjct: 316 EGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHS 375
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C R+++A+ LL EM ++P TY+ + A+ L+++M
Sbjct: 376 YNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEM- 434
Query: 182 EDDLCV----PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
C PN+ TY IL+ F +D ++ +K +L ++ YT+LI G+
Sbjct: 435 ----CSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFI 490
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
K + A + F ++ G P T+ + +GL++ + L +K++++
Sbjct: 491 AGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD 542
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 11/231 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P Y LI G+CK R+D A+ L EM + + P+ VTY+ L+ G+C+ P E
Sbjct: 371 PGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLG--RPKE-- 426
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F EM G P++ ++ I+L + + +L L MKEK + P +
Sbjct: 427 ------ALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVH 480
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ + G++E A+EL ++ +G P TY K ++ A L+R+M
Sbjct: 481 YTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKM- 539
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
EDD +PN +YN++I F+ + + + G ++L ++ ML+
Sbjct: 540 EDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 127/272 (46%), Gaps = 11/272 (4%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+D A M+ P+VV + L ++ K + ++M +
Sbjct: 74 VDDALASFYRMVRINPRPSVVEFGKFLGSFAKK----------KQYSTVVSLCNQMDLFR 123
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
+ +V S +I+++ R + S+ L M + GI P T+ +++ LC+ G+I++A
Sbjct: 124 VTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAV 183
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
EL EMV+ G P+ +Y + + A+ ++++M+++ C PN+ TY+ +I
Sbjct: 184 ELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNG-CKPNVVTYSTIIDS 242
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
++ E + + + ++ +Y ++HG C + EA + F EM+ + ++P
Sbjct: 243 LCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPN 302
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
VTF L GL + M+ R + + + E+ +
Sbjct: 303 TVTFTILVDGLCKEGMVSEARLVFETMTEKGV 334
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y++L+ G C++ R A EM G PN+VTY +LL+G C+ L
Sbjct: 406 PDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLD----- 460
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+ M+ + +EP++ ++I++ A K +++ + + + G P + T
Sbjct: 461 -----EALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRT 515
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++K L G ++A +L +M +G P++ +YN + + +D++ A++L +M
Sbjct: 516 YTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV 575
Query: 182 EDDLCVPNIHTYNILIGM 199
V N+ T+ +L+ +
Sbjct: 576 GKRFSV-NLSTFQMLLDL 592
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 145/292 (49%), Gaps = 14/292 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDM---AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
PNV Y +LI G+CK+ RI A+ L EM+ +G+ PN VTYN+L++G C+
Sbjct: 188 PNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCK------- 240
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
++ + A +VF EM+ +G+ P+V +++I+++ K ++ + M + P
Sbjct: 241 ---DENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPN 297
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V T+ ++ C + +A L +M + GV P+A TY Y A LY
Sbjct: 298 VVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYN 357
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M + + P + TYN LI + R + N + +L D+ +Y +LI LC+K
Sbjct: 358 MMIDRGI-FPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKK 416
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ ++A + EM EKGL P VT+ TL G + LR ++ +++ +
Sbjct: 417 GESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKG 468
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 136/265 (51%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y LI G C ++D A +M+ +EPNVVT+NVL+NG C+
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCK---------- 310
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
KT+ A +F++M +G++P+ +++ ++ Y + + + + N M ++GI P V+T
Sbjct: 311 NKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVST 370
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G ++ A L+ EMV +S TYN + ++ A+KL +M
Sbjct: 371 YNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMF 430
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L P+ TYN L+ + + + ++ ++ ++ +LI G C K +
Sbjct: 431 EKGLN-PSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRL 489
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
++A EM+E+GL+P + T+E +
Sbjct: 490 EDANGLLNEMLERGLVPNRTTYEII 514
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 123/269 (45%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y LI G+CK + A R GEM +G+ PNVVTYN+L+NG+C
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCS---------- 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A + D+M +EP+V + +++++ + + +++ N M+++G+ P T
Sbjct: 276 DGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMT 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C GR+EDA L M+ G+ P TYNC + D A L +M
Sbjct: 336 YTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMV 395
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L ++ TYNILI ++ + + L +Y L+ G C +
Sbjct: 396 SKKLS-ADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNL 454
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ A M KG VT L +G
Sbjct: 455 RAALIVRTRMERKGKQANVVTHNVLIKGF 483
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 19/273 (6%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
EMI+R +E NV+++N+++NG+C+ L+ A V ++M+V G+ P+V +++
Sbjct: 145 EMIKRKIELNVISFNIVVNGLCKVGKLN----------RAGDVIEDMKVWGVSPNVITYN 194
Query: 89 IVLHVY---SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
++ Y R K + L M KGICP TY ++ C + A + GEM
Sbjct: 195 TLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEM 254
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
R G+ P+ TYN + A+ L QM DL PN+ T+N+LI F
Sbjct: 255 QRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDL-EPNVVTHNVLINGFCKNKT 313
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
++ ++N ++ + + +YT LI C+ + ++A + MI++G+ P+ T+
Sbjct: 314 VNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNC 373
Query: 266 LYRGLIQSDMLRTWRRL-----KKKLDEESITF 293
L GL + ++ R L KKL + +T+
Sbjct: 374 LIAGLCRKGDVKAARSLMNEMVSKKLSADVVTY 406
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 126/236 (53%), Gaps = 14/236 (5%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G + ++++ N LL+G+ + E + E V+ EM R IE +V SF+IV++
Sbjct: 115 GFKLSLISCNPLLSGLVK----------ESENGDMEFVYREMIKRKIELNVISFNIVVNG 164
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE---DAEELLGEMVRNGV 150
+ K + D + MK G+ P V TY +++ C GRI A+ +L EMV G+
Sbjct: 165 LCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGI 224
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
P+ TYN + ++ +GAM+++ +M+ L PN+ TYNILI + ++D
Sbjct: 225 CPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGL-RPNVVTYNILINGLCSDGKVDEAV 283
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + + S+L ++ ++ +LI+G C+ + EA F +M ++G+ P +T+ TL
Sbjct: 284 ALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTL 339
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 75/198 (37%), Gaps = 60/198 (30%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PN YT+LI +CK R++ A MI+RG+ P V TYN L+ G+CR+ +
Sbjct: 331 PNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSL 390
Query: 58 -NERFEKTI--------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
NE K + R A K+ DEM +G+ P +++ ++ Y R
Sbjct: 391 MNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCR 450
Query: 97 AHKPQLSL-----------------------------------DKLNFMKEKGICPTVAT 121
+ +L LN M E+G+ P T
Sbjct: 451 EGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTT 510
Query: 122 YTSVVKCLCSCGRIEDAE 139
Y + + + G + D E
Sbjct: 511 YEIIKEEMMEKGFVPDIE 528
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 134/287 (46%), Gaps = 10/287 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+K YT LI GW + + + EM + G +P+VVTY +++N C+
Sbjct: 223 PNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCK---------- 272
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K A ++ +M + + P + + + + + K G P T
Sbjct: 273 AKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPT 332
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +VV C RI+DA ++GEM G+ P+A TY+ A ++++M
Sbjct: 333 YNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMS 392
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P++ TY I++ MF N++DM +WN +K + + ++ LI LC + K
Sbjct: 393 SETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKL 452
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+AC+YF +M++ G+ P F R L+ + M T KK+D+
Sbjct: 453 DDACRYFQQMLDVGIRPTANMFSAFKRALMAAGMENTVIHFAKKVDK 499
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 125/292 (42%), Gaps = 19/292 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N +++ +LI KI + M + EM +R + N T++++ R
Sbjct: 119 NTEIFHALIEALGKIRQFKMIWNLVDEMKQRKLL-NGDTFSLIARRYVR----------A 167
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA----HKPQLSLDKLNFMKEKGICPT 118
K I+ A K F+ M G++P ++ F+ ++ V ++ K Q DK M++ + P
Sbjct: 168 KVIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDK---MRQWNLEPN 224
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ +YT +++ + +E+ EM +G P TY Y K + A+ +Y
Sbjct: 225 LKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYH 284
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M ++ P+ H Y I +RMD E + K S + +Y ++ C
Sbjct: 285 DMLSKNVN-PSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWS 343
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ +A + EM E G+ P T++ + LI+ + + +++ E+
Sbjct: 344 MRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSET 395
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 111 KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
K++G + ++++ L + + L+ EM + + + +T++ + Y K
Sbjct: 112 KQQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRKLL-NGDTFSLIARRYVRAKVI 170
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN-RMDMVREIWNHVKGSELGLDLDSYT 229
A+K + +M++ L P I +N LI + ++ +E+++ ++ L +L SYT
Sbjct: 171 KEALKTFERMEKYGL-KPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYT 229
Query: 230 MLIHGLCEKQ---KWKEACQYFVEMIEKGLLPQKVTF 263
+LI G ++Q K E C+ EM + G P VT+
Sbjct: 230 ILIEGWSQQQNLLKVDEVCR---EMKDDGFQPDVVTY 263
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 151/311 (48%), Gaps = 26/311 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN+ Y +L+ G C+ +D A L EM ERG++P+ +Y+ L+ G+C+ + +
Sbjct: 109 MPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALK 168
Query: 61 -FE----------------------KTIR--NAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
FE KT R A K+F++MR EPDV +F+ ++
Sbjct: 169 VFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLC 228
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + Q + L M+++ P V TY+S++ LC G++ DA+E+ M+ G+ P+
Sbjct: 229 KGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVV 288
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN + + A+ L +M C+P+I TYN LI R ++
Sbjct: 289 TYNSLIHGFCMTNGVDSALLLMEEMTATG-CLPDIITYNTLIDGLCKTGRAPEANRLFGD 347
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+K D+ +Y+ LI G C+ ++ A F +M+++ +LP VTF TL G + +
Sbjct: 348 MKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGL 407
Query: 276 LRTWRRLKKKL 286
+ RL +++
Sbjct: 408 VDDAERLLEEM 418
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 141/284 (49%), Gaps = 11/284 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV +T +I G CK NR+ A + +M ++G PN TYNVL+NG C+ +H
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVH------ 59
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A + EM+ G+ P+V ++S V+H + R K + M E G P + TY
Sbjct: 60 ----RAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTY 115
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC G +++A ELL EM G+ P +Y+ + A+K++
Sbjct: 116 NTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 175
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D C P++ Y+ LI R+D +++ ++ + D+ ++T L+ GLC+ + +
Sbjct: 176 GD-CPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 234
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EA Q M ++ P +T+ +L GL ++ +R + + K++
Sbjct: 235 EAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM 278
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 134/281 (47%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+++I+G+C+ ++D A + +M+E G PN+VTYN LL+G+CR + +E +
Sbjct: 75 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM--DEAY 132
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + DEMR RG++PD S+ ++ + K ++L P V
Sbjct: 133 E--------LLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ LC GR+++A +L +M N P T+ A ++ M
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM- 243
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
ED C PN+ TY+ LI ++ +E++ + + ++ +Y LIHG C
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
A EM G LP +T+ TL GL ++ RL
Sbjct: 304 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL 344
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 148/323 (45%), Gaps = 46/323 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +T+L+ G CK +R+ A++ L M +R PNV+TY+ L++G+C+
Sbjct: 215 PDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQ------- 267
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+R+A++VF M VRGIEP+V +++ ++H + + +L + M G P + T
Sbjct: 268 ---VRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIIT 324
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY----------------- 164
Y +++ LC GR +A L G+M +P TY+C +
Sbjct: 325 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML 384
Query: 165 ---------------RGRKDA---NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G +A + A +L +M D C P+++TY L+ F + RM
Sbjct: 385 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD-CSPDVYTYTSLVDGFCKVGRM 443
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
R + + ++ +YT LI C K A + EM+ G+ P +T+ +L
Sbjct: 444 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSL 503
Query: 267 YRGLIQSDMLRTWRRLKKKLDEE 289
G + L R++ ++L+ +
Sbjct: 504 IGGFCGTGDLEEARKMLERLERD 526
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 10/250 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+ LI G+CK+ RIDMA +M+++ V P+VVT++ L+ G C
Sbjct: 355 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAG-------- 406
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +AE++ +EM PDV +++ ++ + + + + L M ++G P V T
Sbjct: 407 --LVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVT 464
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G+ A +LL EMV NGV P+ TY + G D A K+ +++
Sbjct: 465 YTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLE 524
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D+ C ++ Y +++ RM E+ +K S D Y LI GLC+ ++
Sbjct: 525 RDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKEL 584
Query: 242 KEACQYFVEM 251
+A + EM
Sbjct: 585 GKAMEVLEEM 594
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y++LI G CK R+D A + +M E EP+VVT+ L++G+C+ L
Sbjct: 180 PDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ----- 234
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A++V + M R P+V ++S ++ + + + + + M +GI P V T
Sbjct: 235 -----EAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVT 289
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C ++ A L+ EM G P TYN A A +L+ MK
Sbjct: 290 YNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK 349
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P++ TY+ LIG F L R+DM R +++ + + D+ +++ L+ G C
Sbjct: 350 AK-FCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLV 408
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A + EM+ P T+ +L G + + RR+ K++
Sbjct: 409 DDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 453
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 127/277 (45%), Gaps = 12/277 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y +LI G CK R A R G+M + P+V+TY+ L+ G C+ ER
Sbjct: 319 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL------ER 372
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A +FD+M + + PDV +FS ++ Y A + L M P V
Sbjct: 373 ----IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVY 428
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS+V C GR+ +A +L M + G P+ TY + A KL +M
Sbjct: 429 TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEM 488
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE-LGLDLDSYTMLIHGLCEKQ 239
+ + PN+ TY LIG F ++ R++ ++ E D+ +Y +++ GLC
Sbjct: 489 VGNGV-QPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTG 547
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ A + + + G P+ + L RGL Q L
Sbjct: 548 RMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKEL 584
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 131/257 (50%), Gaps = 11/257 (4%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E NV+T+ ++++G+C+ L A F +M+ +G P+ +++++++ +
Sbjct: 4 EKNVITWTIMIDGLCKANRLP----------EATTYFAKMKKKGTVPNEWTYNVLINGFC 53
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ HK + L MKE G+ P V TY++V+ C +++ A +L +MV NG P+
Sbjct: 54 KVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLV 113
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN + A +L +M+E L P+ +Y+ L+ ++DM +++
Sbjct: 114 TYNTLLSGLCRNGLMDEAYELLDEMRERGL-QPDKFSYDTLMAGLCKTGKIDMALKVFED 172
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ D+ +Y+ LI GLC+ + EAC+ F +M E P VTF L GL + D
Sbjct: 173 NSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDR 232
Query: 276 LRTWRRLKKKLDEESIT 292
L+ +++ + +++ + T
Sbjct: 233 LQEAQQVLETMEDRNCT 249
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 143/285 (50%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +L+ +C+ +D AER + M E G++PN+VT+N ++NG+C+ +
Sbjct: 190 PNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRME----- 244
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A KVFDEM G+ PD S++ ++ Y + +L M KGI P V T
Sbjct: 245 -----DARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+TS++ +C G +E A L+ EM G+ + T+ + + + A+ R+M+
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P++ YN LI + + RMD RE+ ++ + D+ +Y+ ++ C+
Sbjct: 360 QCRI-QPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDT 418
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A Q +M+E G+LP +T+ +L R L + L L K +
Sbjct: 419 HSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNM 463
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 151/323 (46%), Gaps = 46/323 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + S++ G CK R++ A + EM++ G+ P+ V+YN L+ G C+ H
Sbjct: 225 PNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSH----- 279
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG------- 114
A VF EM +GI PDV +F+ ++HV +A + ++ + M+E+G
Sbjct: 280 -----EALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEIT 334
Query: 115 ----------------------------ICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
I P+V Y +++ C GR+++A EL+ EM
Sbjct: 335 FTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREME 394
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
GV P TY+ Y D + A +L +QM E+ + +P+ TY+ LI + R+
Sbjct: 395 AKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV-LPDAITYSSLIRVLCEEKRL 453
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ ++ L D +YT LI G C++ + A EM++ G+LP VT+ L
Sbjct: 454 GDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVL 513
Query: 267 YRGLIQSDMLRTWRRLKKKLDEE 289
GL +S + +RL KL E
Sbjct: 514 INGLSKSARTKEAQRLLFKLYHE 536
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 140/290 (48%), Gaps = 12/290 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ + + A RF M+ GV PNV TYN+L+ +C R H E
Sbjct: 121 PSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRG--HRKE-- 175
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V +MR G +P+ +++ ++ + RA + + ++ M+E G+ P + T
Sbjct: 176 ------ALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVT 229
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ SVV +C GR+EDA ++ EMV+ G++P +YN Y ++ A+ ++ +M
Sbjct: 230 FNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMT 289
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +P++ T+ LI + ++ + ++ L ++ ++T LI G C+K
Sbjct: 290 RKGI-MPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFL 348
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+A EM + + P V + L G + R L ++++ + +
Sbjct: 349 DDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGV 398
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 138/299 (46%), Gaps = 24/299 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G+C + R+D A + EM +GV+P+VVTY+ +L+ C+ H
Sbjct: 365 PSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH----- 419
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ +M G+ PD ++S ++ V + + M G+ P T
Sbjct: 420 -----SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVT 474
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKDANGAMKLY 177
YTS++ C G +E A L EMV+ GV P TY N K R ++ KLY
Sbjct: 475 YTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLY 534
Query: 178 RQ------MKEDDL--CVPNIHTYNILIGM--FMALNRMDMVREIWNHVKGSELGLDLDS 227
+ +K D L C N ++L + F M+ +++ + LD
Sbjct: 535 HEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSV 594
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
Y++LIHG C + +A + +M++ G P + +L RGL + M+ ++ ++L
Sbjct: 595 YSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQL 653
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 88/224 (39%), Gaps = 40/224 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YTSLI G CK ++ A EM++ GV P+VVTY+VL+NG+ + A +R
Sbjct: 470 PDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRL 529
Query: 62 -------------------EKTIRNAE---------------------KVFDEMRVRGIE 81
+ RNAE KV+ + R
Sbjct: 530 LFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWN 589
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
D + +S+++H + R +L M + G P + S+++ L G + +A+++
Sbjct: 590 LDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQV 649
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ +++ AE + + + + M D L
Sbjct: 650 IQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGL 693
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 148/295 (50%), Gaps = 28/295 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+V YT+L++ CK + D A+ L EM+ +G P+ VT++ L++G+C+
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRV 183
Query: 52 ------RASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
R + + FE I+ A KV + +G P V F++V++ +
Sbjct: 184 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 243
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A + L M EKG P V T+T ++ LC R+ +A++LL +MV G SP+
Sbjct: 244 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVV 303
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY+ + + A +L++ M+ + C PN+ T+NILI R++ R++++
Sbjct: 304 TYSTVINGLCKQGQVDDAYELFQLMERRN-CPPNVVTHNILIDGLCKAKRIEEARQLYHR 362
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL-LPQKVTFETLYRG 269
++ + D+ +Y LI GLC+ + EA Q F + E G+ VT+ TL+ G
Sbjct: 363 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 417
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 10/273 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V M+ +I G+CK +D A + L MIE+G PNV T+ +L+ G+C+
Sbjct: 230 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCK---------- 279
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++ ++M + G P+V ++S V++ + + + + M+ + P V T
Sbjct: 280 ANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVT 339
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC RIE+A +L M G +P TYN + A +L++ +
Sbjct: 340 HNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIP 399
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + N TY+ L + AL RM I++ + DL +YT LI C+ +
Sbjct: 400 ESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRA 459
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
E + EM KG P+ T + GL + +
Sbjct: 460 VEVVELVEEMASKGFPPRVNTLSAVLGGLFEGN 492
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 134/274 (48%), Gaps = 12/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV +T LI G CK NR+ A++ L +M+ G PNVVTY+ ++NG+C++
Sbjct: 264 VPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQ------ 317
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +A ++F M R P+V + +I++ +A + + + + M+E G P +
Sbjct: 318 ----VDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDII 373
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS-AETYNCFFKEYRGRKDANGAMKLYRQ 179
TY S++ LC ++++A +L + +GVS + A TY+ F Y A +++
Sbjct: 374 TYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSM 433
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ + P++ TY LI + +R V E+ + +++ + ++ GL E
Sbjct: 434 LVDKGF-SPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGN 492
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ A Q F M +G + + + G+ ++
Sbjct: 493 HTERAIQLFDSMAARGCTDDALIYNLVVEGMARA 526
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 140/313 (44%), Gaps = 26/313 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS-LHPNE 59
MPN Y LI G+ +D+A + L EM G E N V + L+ G+C + E
Sbjct: 54 MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALE 113
Query: 60 RFEKTIRN-----------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F ++ A+ + EM +G PD +FS ++ +
Sbjct: 114 HFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCK 173
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCS-CGRIEDAEELLGEMVRNGVSPSAE 155
+ + L + ++G+ + A + ++++ LC+ +E A ++LG ++ G +P+
Sbjct: 174 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 233
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+N + KD + A KL M E CVPN+ T+ ILI NR+ +++
Sbjct: 234 MFNLVINGFCKAKDLDSAYKLLEVMIEKG-CVPNVFTFTILITGLCKANRVGEAQQLLEK 292
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ ++ +Y+ +I+GLC++ + +A + F M + P VT L GL ++
Sbjct: 293 MVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 352
Query: 276 LRTWRRLKKKLDE 288
+ R+L ++ E
Sbjct: 353 IEEARQLYHRMRE 365
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 124/291 (42%), Gaps = 32/291 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + LI G CK RI+ A + M E G P+++TYN L++G+C+ S +E F
Sbjct: 335 PNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK--SFQVDEAF 392
Query: 62 E--KTI--------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
+ +TI +A ++F + +G PD+ +++ ++
Sbjct: 393 QLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILE 452
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Y + + ++ + M KG P V T ++V+ L E A +L M G +
Sbjct: 453 YCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDD 512
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQM--KEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
A YN + + A+ + Q+ K D P+ + L+ + + D ++
Sbjct: 513 ALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQ 572
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
+ + + + SY L+ GL Q+W EA Q F M+ G P+ T
Sbjct: 573 LLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 623
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 49/265 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YTSLI +CK +R + EM +G P V T + +L G L
Sbjct: 441 PDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGG------LFEGNHT 494
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFM---KEKGICPT 118
E+ I ++FD M RG D +++V+ +RA K +L L + +++ P+
Sbjct: 495 ERAI----QLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPS 550
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ ++V+ LC G+ +DA++LL +M G + + +YN + + A +++
Sbjct: 551 SSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFE 610
Query: 179 QM-----------------------KEDDL-----------CVPNIHTYNILIGMFMALN 204
M K DD C P+I T N LIG +
Sbjct: 611 AMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSG 670
Query: 205 RMDMVREIWNHVKGSELGLDLDSYT 229
R D+ R++ + +E GL+ + T
Sbjct: 671 RADLARKLLEEM--TEAGLEPNDTT 693
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 115/272 (42%), Gaps = 11/272 (4%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
C++NR A + R PN TY +L+ G L A ++ +E
Sbjct: 33 CRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDI----------AIQLLEE 82
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
M+ G E + + ++ A + +L+ M K P V TYT++V LC G+
Sbjct: 83 MKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGK 141
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
++A+ +L EMV G +P T++ A ++ + + + +
Sbjct: 142 FDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFET 201
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
I+ + N +++ ++ V + + ++I+G C+ + A + MIEK
Sbjct: 202 IIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEK 261
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
G +P TF L GL +++ + ++L +K+
Sbjct: 262 GCVPNVFTFTILITGLCKANRVGEAQQLLEKM 293
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 31/224 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
P V ++++ G + N + A + M RG + + YN+++ G+ RAS H
Sbjct: 476 PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGM-ARASKHDKALA 534
Query: 58 ---------NERFEKT----------------IRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
+ +F + +A+++ +M RG V+S++ +L
Sbjct: 535 VLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLS 594
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
SR + + M G P ++T V+ LCS +++DA EL+ M + G P
Sbjct: 595 GLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCP 654
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
ET N Y A+ A KL +M E L PN T+++L
Sbjct: 655 DIETCNTLIGGYCKSGRADLARKLLEEMTEAGL-EPNDTTHDLL 697
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 7/176 (3%)
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
KP+L L ++ + + + V + + LC R ++A L + P+ TY
Sbjct: 3 KPELVLLFFDWARSR-VGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYG 61
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK- 217
+ + D + A++L +MK N + L+ R V E H +
Sbjct: 62 ILIRGFSSAGDLDIAIQLLEEMKSSGF-EGNAVVHTTLMKGLCDAGR---VVEALEHFRA 117
Query: 218 -GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ D+ +YT L+H LC+ K+ EA EM+ +G P VTF TL GL +
Sbjct: 118 MAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCK 173
>gi|356499705|ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Glycine max]
Length = 500
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 135/266 (50%), Gaps = 22/266 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ + L+ GW D+ F EM E GV P+VVTYN L++ C+
Sbjct: 203 PNLQTFNILLSGWKTPEDADL---FFKEMKEMGVTPDVVTYNSLMDVYCK---------- 249
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I A K+ DEMR + PDV +++ ++ +P + + L MKE G P A
Sbjct: 250 GREIEKAYKMLDEMRDQDFSPDVITYTCIIGGLGLIGQPDKARNVLKEMKEYGCYPDAAA 309
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + ++ C R+ DA L+ EMV G+SP+A TYN FF+ + D + +Y++M
Sbjct: 310 YNAAIRNFCIAKRLGDAHGLVEEMVTKGLSPNATTYNLFFRVFYWSNDLQSSWNMYQRMM 369
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM----LIHGLCE 237
+ C+PN + LI +F +++M + W + G SYT+ L LC+
Sbjct: 370 VEG-CLPNTQSCMFLIRLFRRHEKVEMALQFWGDMVEKGFG----SYTLVSDVLFDLLCD 424
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTF 263
K +EA + F+EM+EKG P V+F
Sbjct: 425 MGKLEEAEKCFLEMVEKGQKPSHVSF 450
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 2/154 (1%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
EDA+ EM GV+P TYN Y ++ A K+ +M++ D P++ TY
Sbjct: 219 EDADLFFKEMKEMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFS-PDVITYTC 277
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
+IG + + D R + +K D +Y I C ++ +A EM+ KG
Sbjct: 278 IIGGLGLIGQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMVTKG 337
Query: 256 LLPQKVTFETLYRGLIQS-DMLRTWRRLKKKLDE 288
L P T+ +R S D+ +W ++ + E
Sbjct: 338 LSPNATTYNLFFRVFYWSNDLQSSWNMYQRMMVE 371
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN + LI + + +++MA +F G+M+E+G + +VL + +C L
Sbjct: 374 LPNTQSCMFLIRLFRRHEKVEMALQFWGDMVEKGFGSYTLVSDVLFDLLCDMGKLE---- 429
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSF 87
AEK F EM +G +P SF
Sbjct: 430 ------EAEKCFLEMVEKGQKPSHVSF 450
>gi|356570295|ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 516
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 150/265 (56%), Gaps = 15/265 (5%)
Query: 3 NVKMYTSLIYGWCK-INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+ K + ++ GWC I AER EM +R ++ +VV+Y +++ + + L+
Sbjct: 202 DTKSFNIILNGWCNLIVSTSHAERIWHEMSKRRIQHDVVSYGSIISCYSKSSKLY----- 256
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K +R +FDEM+ R I PD ++ V++ ++ + +++ + +++ + P V T
Sbjct: 257 -KVLR----MFDEMKKRKITPDRKVYNAVIYALAKGRLVKEAVNLIGTLEDNDVTPNVVT 311
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++K LC G++++A++L E+++ +SP+ +T++ FF+ R +++ +L +MK
Sbjct: 312 YNSLIKPLCKAGKVDEAKQLFYEILKRHLSPTIQTFHAFFRILRTKEE---VFELLDKMK 368
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P I TY +L+ F ++D V ++W+ ++ +G D SY +LIHGL K
Sbjct: 369 ELG-CYPTIETYIMLMRKFCRWRQLDDVFKMWDAMREDGIGHDRSSYIVLIHGLFLNGKL 427
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+EA Y+ EM EKG LP+ T E L
Sbjct: 428 EEAHTYYAEMQEKGFLPEPKTEEML 452
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K+Y ++IY K + A +G + + V PNVVTYN L+ +C+
Sbjct: 272 PDRKVYNAVIYALAKGRLVKEAVNLIGTLEDNDVTPNVVTYNSLIKPLCKAGK------- 324
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++F E+ R + P + +F + + LDK MKE G PT+ T
Sbjct: 325 ---VDEAKQLFYEILKRHLSPTIQTFHAFFRILRTKEEVFELLDK---MKELGCYPTIET 378
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
Y +++ C +++D ++ M +G+ +Y
Sbjct: 379 YIMLMRKFCRWRQLDDVFKMWDAMREDGIGHDRSSY 414
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 112/272 (41%), Gaps = 16/272 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+++ Y S+I K+ + D A + EM P++VT LL + + ++H R
Sbjct: 95 SIREYHSMISILGKMRKFDTAWNLIEEMRRGRTGPSLVTPQTLLIMIRKYCAVHDVAR-- 152
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A F + + + F +L R Q + L F + ++
Sbjct: 153 -----AINTFYAYKQFNFQVGLEEFHSLLSALCRYKNVQ-DAEHLLFCNKNLFPLDTKSF 206
Query: 123 TSVVKCLCS-CGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ C+ AE + EM + + +Y Y ++++ +MK
Sbjct: 207 NIILNGWCNLIVSTSHAERIWHEMSKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMK 266
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV---KGSELGLDLDSYTMLIHGLCEK 238
+ + P+ YN +I AL + +V+E N + + +++ ++ +Y LI LC+
Sbjct: 267 KRKI-TPDRKVYNAVI---YALAKGRLVKEAVNLIGTLEDNDVTPNVVTYNSLIKPLCKA 322
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
K EA Q F E++++ L P TF +R L
Sbjct: 323 GKVDEAKQLFYEILKRHLSPTIQTFHAFFRIL 354
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 152/315 (48%), Gaps = 27/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y S+I G+C R AE+ L EM+ER + P+VVTYN L+N + F
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF-----F 342
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A +++DEM RGI P+ +++ ++ + + + + D M KG P V T
Sbjct: 343 E-----AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 397
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ C RI+D ELL EM R G+ + TYN + D N A+ L +QM
Sbjct: 398 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 457
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD-----------SYTM 230
+C P+I T N L+ ++ E++ ++ S++ LD +Y +
Sbjct: 458 SSGVC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNI 516
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKK 285
LI GL + K+ EA + + EM +G++P +T+ ++ GL + L ++ K
Sbjct: 517 LICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 576
Query: 286 LDEESITFGSEFQNY 300
+TF + Y
Sbjct: 577 FSPNVVTFNTLINGY 591
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 10/269 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+L+ G C+ RI A L M+E G++P +TY +++G+C++
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD------- 234
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
T+ + V I P+V +S ++ + + + + M+EKGI P + T
Sbjct: 235 --TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ CS GR DAE+LL EM+ +SP TYN + A +LY +M
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEML 352
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PN TYN +I F +R+D +++ + D+ ++T LI G C ++
Sbjct: 353 PRGI-IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 411
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + EM +GL+ VT+ TL G
Sbjct: 412 DDGMELLHEMPRRGLVANTVTYNTLIHGF 440
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 22/281 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y S+I G+CK +R+D AE M +G P+V T+ L++G C
Sbjct: 357 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCG--------- 407
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K I + ++ EM RG+ + +++ ++H + +LD M G+CP +
Sbjct: 408 -AKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV 466
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVR-----------NGVSPSAETYNCFFKEYRGRKD 169
T +++ LC G+++DA E+ M + NGV P TYN
Sbjct: 467 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGK 526
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A +LY +M + VP+ TY+ +I +R+D +++ + ++ ++
Sbjct: 527 FLEAEELYEEMPHRGI-VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFN 585
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
LI+G C+ + + + F EM +G++ + + TL G
Sbjct: 586 TLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGF 626
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 10/272 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + L+ ++ R D+ +M + + ++ ++N+L+ C + L
Sbjct: 76 LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLP---- 131
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A F ++ G+ PDV +F+ +LH + +LD + M E P V
Sbjct: 132 ------FALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVV 185
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T+++ LC GRI +A LL M+ +G+ P+ TY + D A+ L R+M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+E +PN+ Y+ +I R + ++ ++ + DL +Y +I G C +
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
W +A Q EM+E+ + P VT+ L ++
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVK 337
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 36/234 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+ N Y +LI+G+C + ++ A +MI GV P++VT N LL+G+C L
Sbjct: 427 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 486
Query: 56 ---------------HPNERFEKTIRN----------------AEKVFDEMRVRGIEPDV 84
HP E + AE++++EM RGI PD
Sbjct: 487 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 546
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++S ++ + + + M K P V T+ +++ C GR++D EL E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 606
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
M R G+ A Y +R + NGA+ ++++M + I N+L G
Sbjct: 607 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 92/228 (40%), Gaps = 36/228 (15%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + +A +F +M P V F ++ V R +P L + M+ K I + ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++KC CSC ++ A G++ + G+ P T+ + A+ + QM E
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C PN+ T +T L++GLC + +
Sbjct: 178 -TTCRPNVVT-----------------------------------FTTLMNGLCREGRIV 201
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
EA M+E GL P ++T+ T+ G+ + + L +K++E S
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 10/180 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI G + AE EM RG+ P+ +TY+ +++G+C+++ L
Sbjct: 509 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD----- 563
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F M + P+V +F+ +++ Y +A + L+ M +GI
Sbjct: 564 -----EATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAII 618
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ G I A ++ EM+ +GV P T + +++ A+ + ++
Sbjct: 619 YITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+S+I G CK +R+D A + M + PNVVT+N L+NG C+
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGR------ 596
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + ++F EM RGI D + +++ + + +LD M G+ P
Sbjct: 597 ----VDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTI 652
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEM 145
T +++ S +E A +L ++
Sbjct: 653 TIRNMLTGFWSKEELERAVAMLEDL 677
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 149/311 (47%), Gaps = 26/311 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN+ Y +L+ G C+ +D A L EM ERG++P+ +Y+ L+ G+C+ + +
Sbjct: 228 MPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALK 287
Query: 61 -FEKT------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
FE + A K+F++MR EPDV +F+ ++
Sbjct: 288 VFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLC 347
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + Q + L M+++ P V TY+S++ LC G++ DA+E+ M+ G+ P+
Sbjct: 348 KGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVV 407
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN + + A+ L +M C+P+I TYN LI R ++
Sbjct: 408 TYNSLIHGFCMTNGVDSALLLMEEMTATG-CLPDIITYNTLIDGLCKTGRAPEANRLFGD 466
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+K D+ +Y+ LI G C+ ++ A F +M+++ +LP VTF TL G + +
Sbjct: 467 MKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGL 526
Query: 276 LRTWRRLKKKL 286
+ RL +++
Sbjct: 527 VDDAERLLEEM 537
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 148/323 (45%), Gaps = 46/323 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +T+L+ G CK +R+ A++ L M +R PNV+TY+ L++G+C+
Sbjct: 334 PDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQ------- 386
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+R+A++VF M VRGIEP+V +++ ++H + + +L + M G P + T
Sbjct: 387 ---VRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIIT 443
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY----------------- 164
Y +++ LC GR +A L G+M +P TY+C +
Sbjct: 444 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML 503
Query: 165 ---------------RGRKDA---NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G +A + A +L +M D C P+++TY L+ F + RM
Sbjct: 504 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD-CSPDVYTYTSLVDGFCKVGRM 562
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
R + + ++ +YT LI C K A + EM+ G+ P +T+ +L
Sbjct: 563 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSL 622
Query: 267 YRGLIQSDMLRTWRRLKKKLDEE 289
G + L R++ ++L+ +
Sbjct: 623 IGGFCGTGDLEEARKILERLERD 645
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 150/313 (47%), Gaps = 23/313 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPNER 60
PNV Y +I G CK +D A L EM E G P+ YN +++ +C+ R + +
Sbjct: 57 PNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDY 116
Query: 61 F-----EKTI----------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK 99
F EK + A F +M+ +G P+ +++++++ + + HK
Sbjct: 117 FRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHK 176
Query: 100 PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC 159
+ L MKE G+ P V TY++V+ C +++ A +L +MV NG P+ TYN
Sbjct: 177 VHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNT 236
Query: 160 FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
+ A +L +M+E L P+ +Y+ L+ ++DM +++
Sbjct: 237 LLSGLCRNGLMDEAYELLDEMRERGL-QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 295
Query: 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 279
+ D+ +Y+ LI GLC+ + EAC+ F +M E P VTF L GL + D L+
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 355
Query: 280 RRLKKKLDEESIT 292
+++ + +++ + T
Sbjct: 356 QQVLETMEDRNCT 368
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 132/270 (48%), Gaps = 11/270 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+ LI G+CK+ RIDMA +M+++ V P+VVT++ L+ G C
Sbjct: 474 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAG-------- 525
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +AE++ +EM PDV +++ ++ + + + + L M ++G P V T
Sbjct: 526 --LVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVT 583
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G+ A LL EMV NGV P+ TY + G D A K+ +++
Sbjct: 584 YTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLE 643
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D+ C ++ Y +++ RM E+ +K S D Y LI GLC+ ++
Sbjct: 644 RDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKEL 703
Query: 242 KEACQYFVEM-IEKGLLPQKVTFETLYRGL 270
+A + EM + + P +E + + L
Sbjct: 704 GKAMEVLEEMTLSRKSRPNAEAYEAVIQEL 733
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y++LI G CK R+D A + +M E EP+VVT+ L++G+C+ L
Sbjct: 299 PDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ----- 353
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A++V + M R P+V ++S ++ + + + + + M +GI P V T
Sbjct: 354 -----EAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVT 408
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C ++ A L+ EM G P TYN A A +L+ MK
Sbjct: 409 YNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK 468
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P++ TY+ LIG F L R+DM R +++ + + D+ +++ L+ G C
Sbjct: 469 AK-FCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLV 527
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A + EM+ P T+ +L G + + RR+ K++
Sbjct: 528 DDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 572
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 127/277 (45%), Gaps = 12/277 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y +LI G CK R A R G+M + P+V+TY+ L+ G C+ ER
Sbjct: 438 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL------ER 491
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A +FD+M + + PDV +FS ++ Y A + L M P V
Sbjct: 492 ----IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVY 547
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS+V C GR+ +A +L M + G P+ TY + A +L +M
Sbjct: 548 TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEM 607
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE-LGLDLDSYTMLIHGLCEKQ 239
+ + PN+ TY LIG F ++ R+I ++ E D+ +Y +++ GLC
Sbjct: 608 VGNGV-QPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTG 666
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ A + + + G P+ + L RGL Q L
Sbjct: 667 RMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKEL 703
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 125/272 (45%), Gaps = 16/272 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y L + RID L G+ PNV TY V++ G+C+ L
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLD------ 76
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK-EKGICPTVAT 121
A ++ +EMR G PD ++ V+H +A +LD M+ EK V T
Sbjct: 77 ----KACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEK----NVIT 128
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T ++ LC R+ +A +M + G P+ TYN + + A L ++MK
Sbjct: 129 WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 188
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L PN+ TY+ +I F ++D +++ + + +L +Y L+ GLC
Sbjct: 189 ESGL-APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 247
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA + EM E+GL P K +++TL GL ++
Sbjct: 248 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKT 279
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 31/245 (12%)
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
+G + +V +++ + RA + + L GI P V TY V++ LC G ++
Sbjct: 18 QGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDK 77
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK-----------EDDLC 186
A ELL EM +G P A YN ++ A+ +R M+ D LC
Sbjct: 78 ACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLC 137
Query: 187 --------------------VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
VPN TYN+LI F ++++ + +K S L ++
Sbjct: 138 KANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVV 197
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+Y+ +IHG C + K A + F +M+E G +P VT+ TL GL ++ ++ L ++
Sbjct: 198 TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM 257
Query: 287 DEESI 291
E +
Sbjct: 258 RERGL 262
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 4/182 (2%)
Query: 111 KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
K++G V TY + + L RI++ +L G++P+ TY + D
Sbjct: 16 KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
+ A +L +M+E VP+ YN +I AL + + ++ + E ++ ++T+
Sbjct: 76 DKACELLEEMRESGP-VPDAAIYNFVI---HALCKARNTAKALDYFRSMECEKNVITWTI 131
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+I GLC+ + EA YF +M +KG +P + T+ L G + + L K++ E
Sbjct: 132 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 191
Query: 291 IT 292
+
Sbjct: 192 LA 193
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 169 DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
D + A++ + + N++TYN L + R+D I + + ++ +Y
Sbjct: 3 DPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTY 62
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
++I GLC+ +AC+ EM E G +P + + L ++ R K LD
Sbjct: 63 AVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKA------RNTAKALD 115
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 153/289 (52%), Gaps = 19/289 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV MY ++I G CK ++ A EM RG+ PNV+TY+ L+ G C L
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQL------ 201
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +EM ++ I P+V +++I++ + K + + + L M ++G+ P V +
Sbjct: 202 ----MEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVS 257
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C G +++A+++ MV+ GV+P+ +YN K + AM L R++
Sbjct: 258 YNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVL 317
Query: 182 EDDLCVPNIHTYNILIGMFMALNR----MDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
++ VPN TY+ LI F L R +D+++E+++ + + D+ +YT L+ LC+
Sbjct: 318 HKNM-VPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPA----DVVTYTSLLDALCK 372
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
Q +A F++M E+G+ P K T+ L GL + + ++L + L
Sbjct: 373 NQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHL 421
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 137/273 (50%), Gaps = 11/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT L+ CK ++ A+ L M + GV+PNVV+YN L++G C
Sbjct: 218 PNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGE------- 270
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++NA+++F M +G+ P+V S++I++ ++ + +++ L + K + P T
Sbjct: 271 ---VQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVT 327
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ C GRI A +LL EM G TY ++ + A L+ +MK
Sbjct: 328 YSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK 387
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + PN +TY LI R ++++ H+ +++ +Y ++I GLC++
Sbjct: 388 ERGI-QPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGML 446
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA +M E G +P VTFE + R L + D
Sbjct: 447 DEALAMKSKMEENGCIPDAVTFEIIIRSLFEKD 479
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 139/306 (45%), Gaps = 20/306 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ LI +C + ++ + LG++++ G +PN +T N L+ G+C + + + F
Sbjct: 43 PDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHF 102
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
D++ +G + D S++ +L+ + + + +L L ++++ P V
Sbjct: 103 H----------DKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVM 152
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC + +A +L EM G+ P+ TY+ + A L +M
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMI 212
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ PN++TY IL+ ++ + + + + ++ SY L+ G C +
Sbjct: 213 LKNIN-PNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEV 271
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-------DMLRTWRRLKKKLDEESITFG 294
+ A Q F M++KG+ P ++ + L +S ++LR L K + ++T+
Sbjct: 272 QNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLR--EVLHKNMVPNTVTYS 329
Query: 295 SEFQNY 300
S +
Sbjct: 330 SLIDGF 335
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 10/185 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y+SLI G+CK+ RI A L EM RG +VVTY LL+ +C+ N+
Sbjct: 322 VPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCK------NQN 375
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K A +F +M+ RGI+P+ +++ ++ + + + + + KG V
Sbjct: 376 LDK----ATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVW 431
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC G +++A + +M NG P A T+ + + + A KL +M
Sbjct: 432 TYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM 491
Query: 181 KEDDL 185
DL
Sbjct: 492 IAKDL 496
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 1/224 (0%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A +F +M+V+GIEPD+ + +I+++ + + S L + + G P T +++K
Sbjct: 29 AISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMK 88
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
LC G ++ + ++V G +Y + A+KL R M ED
Sbjct: 89 GLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLR-MIEDRSTR 147
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
PN+ YN +I ++ ++++ + + ++ +Y+ LI+G C + EA
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGL 207
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EMI K + P T+ L L + ++ + L + +E +
Sbjct: 208 LNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV 251
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 142/293 (48%), Gaps = 11/293 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT +I G C R+ A L +M++RG +P+VVTY VLL VC+ +
Sbjct: 139 PDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFG----- 193
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V DEMR +G P++ +++++++ R + + + LN + G P + +
Sbjct: 194 -----EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVS 248
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+V+K LC+ R +D + L EMV P+ T++ + + A+++ +QM
Sbjct: 249 YTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMS 308
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C PN NI+I R+D + N++ D SYT ++ GLC +W
Sbjct: 309 QHG-CTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRW 367
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
+ A + EM+ K P +VTF T L Q ++ +L + + E + G
Sbjct: 368 EHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVG 420
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 140/316 (44%), Gaps = 29/316 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RR------- 52
PN+ Y +I G C+ R+D A+ L + G +P++V+Y +L G+C RR
Sbjct: 209 PNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVL 268
Query: 53 ------ASLHPNE-RFEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PNE F+ +R A +V +M G P+ T +IV++ +
Sbjct: 269 FAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICK 328
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D LN M G P +YT+V++ LC GR E A+ELL EMVR P+ T
Sbjct: 329 QGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVT 388
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N F + A+KL M E C I TYN L+ F R+D E++N++
Sbjct: 389 FNTFICILCQKGLIEQAIKLIELMPEYG-CSVGIVTYNALVHGFCVQGRVDSALELFNNL 447
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ +YT L+ GLC ++ A + MI+K VTF L Q +
Sbjct: 448 PCEP---NTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFV 504
Query: 277 RTWRRLKKKLDEESIT 292
L ++ E T
Sbjct: 505 EEAMELVNQMMEHGCT 520
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 18/286 (6%)
Query: 17 INRIDMAE--RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
I R D+AE R + RG P+V L+ +CRR +A +V
Sbjct: 50 IARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGR----------TSDAARVLRT 99
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN-FMKEKGICPTVATYTSVVKCLCSCG 133
G DV +++ ++ Y R + LD + + P TYT +++ LC G
Sbjct: 100 AEASGAPVDVFAYNTLVAGYCRYGR----LDAARRLIASMPVPPDAYTYTPIIRGLCDRG 155
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
R+ DA LL +M++ G PS TY + AM + +M+ C PNI TY
Sbjct: 156 RVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG-CTPNIVTY 214
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N++I R+D +EI N + D+ SYT ++ GLC ++W + F EM++
Sbjct: 215 NVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVD 274
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
K +P +VTF+ L R + M+ ++ +++ + T + N
Sbjct: 275 KKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCN 320
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 25/303 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + +I CK R+D A FL M G P+ ++Y +L G+CR R+
Sbjct: 314 PNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAG------RW 367
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +A+++ EM + P+ +F+ + + + + ++ + M E G + T
Sbjct: 368 E----HAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVT 423
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V C GR++ A EL + P+ TY + + A +L M
Sbjct: 424 YNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMI 480
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ D C N T+N+L+ F ++ E+ N + +L ++ L+ G+ +
Sbjct: 481 QKD-CPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNS 539
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
+EA + ++ KG+ +T+ ++ L + D RT EE+I Q+
Sbjct: 540 EEALELLHGLVSKGVSLDTITYSSVVDVLSRED--RT---------EEAIQMLHAVQDMG 588
Query: 302 FKP 304
+P
Sbjct: 589 MRP 591
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+L+ G C R+D A L MI++ N VT+NVL++ C++
Sbjct: 451 PNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKG-------- 502
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++ ++M G P++ +F+ +L ++ + +L+ L+ + KG+ T
Sbjct: 503 --FVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTIT 560
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+SVV L R E+A ++L + G+ P YN R + + A+ + M
Sbjct: 561 YSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMV 620
Query: 182 EDDLCVPNIHTYNILI 197
+ C+PN TY ILI
Sbjct: 621 SNG-CMPNESTYIILI 635
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V MY +++ CK D A F M+ G PN TY +L+ G+
Sbjct: 591 PKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAH---------- 640
Query: 62 EKTIRNAEKVFDEMRVRGI 80
E ++ A V E+ +G+
Sbjct: 641 EGLLKEARYVLSELYAKGV 659
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 146/290 (50%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+L+ G C + +I A +M+ G +PNVVTY L+NG+C+
Sbjct: 124 PDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK---------- 173
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A +F EM +GI PD+ +++ ++H + + LN M + I P V +
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
VV LC G++ +A +++ M++ GV P TY + R + + A+K++ M
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMV 293
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ CV N+ +YN LI + + R+D ++ + EL + +Y+ LIHGLC +
Sbjct: 294 RNG-CVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRL 352
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++A F EM+ G +P VT+ L L ++ L L K ++ ++
Sbjct: 353 QDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNL 402
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 147/294 (50%), Gaps = 15/294 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV ++ CK ++ A + MI+ GVEP+VVTY L++G C R+ +
Sbjct: 228 MPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMD---- 283
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVFD M G +V S++ +++ Y + + ++ M + + P
Sbjct: 284 ------EAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTM 337
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY++++ LC GR++DA L EMV G P+ TY+ AM L + +
Sbjct: 338 TYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAI 397
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +L P++ YNI I ++ R++++++ L D+ ++ ++I GLC++
Sbjct: 398 EGSNL-DPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
EA + F EM E G L T+ T+ +GL+Q++ +T R + +L EE + G
Sbjct: 457 LDEASKLFREMDENGCLRNGCTYNTITQGLLQNN--KTSRAI--QLLEEMLARG 506
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 137/314 (43%), Gaps = 30/314 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PNV Y +L+ G CK ++ A EMI +G+ P++ TYN L++ +C
Sbjct: 159 PNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTL 218
Query: 52 -----RASLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
++ + PN E + A V D M G+EPDV +++ ++ +
Sbjct: 219 LNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCL 278
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ ++ + M G V +Y +++ C RI+ A L EM R + P+ T
Sbjct: 279 RSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMT 338
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLC--VPNIHTYNILIGMFMALNRMDMVREIWN 214
Y+ A+ L+ +M C +PN+ TY+IL+ +R+ +
Sbjct: 339 YSTLIHGLCHVGRLQDAIALFNEMVA---CGQIPNLVTYSILLDYLCKNHRLAEAMALLK 395
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
++GS L D+ Y + I G+C + A F + +GL P T + RGL +
Sbjct: 396 AIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRG 455
Query: 275 MLRTWRRLKKKLDE 288
+L +L +++DE
Sbjct: 456 LLDEASKLFREMDE 469
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 11/250 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y +LI G+CKI RID A EM + + PN +TY+ L++G+C L
Sbjct: 300 NVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRL------- 352
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++A +F+EM G P++ ++SI+L + H+ ++ L ++ + P V Y
Sbjct: 353 ---QDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVY 409
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ +C G +E A +L + G+ P T+N + R + A KL+R+M E
Sbjct: 410 NIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDE 469
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ C+ N TYN + + N+ ++ + D+ + +L+ L + +
Sbjct: 470 NG-CLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQ 528
Query: 243 EACQYFVEMI 252
Q E +
Sbjct: 529 SVKQILCEFM 538
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 11/252 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N +D A M+ P + + LL + + + T+ + K D
Sbjct: 35 NTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKM-------KHYSTVLSLSKKMDSF-- 85
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
GI PDV + +IV++ + ++ +L L + + G P AT+T++V+ LC G+I +
Sbjct: 86 -GIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGE 144
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A ++ +MV G P+ TY + A+ L+ +M + P+I TYN LI
Sbjct: 145 ALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGIS-PDIFTYNSLI 203
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
L V + N + S++ ++ S +++ LC++ K EA MI+ G+
Sbjct: 204 HALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVE 263
Query: 258 PQKVTFETLYRG 269
P VT+ L G
Sbjct: 264 PDVVTYAALMDG 275
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 141/271 (52%), Gaps = 12/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++K YT L+ GW + + EM + G EP+VVT+ +L+N C+ ++
Sbjct: 258 PDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCK------ARKY 311
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ IR +F EM + I+P F +++ + + +L+ +K G P T
Sbjct: 312 DEAIR----LFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPT 367
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQM 180
Y +VV C ++ A ++ EM ++GV P++ TY+ +GRK + A ++++M
Sbjct: 368 YNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRK-SKEAYSVFQRM 426
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P + TY+I+I MF R+DM +IW+ +K + + ++ LI+ LC + K
Sbjct: 427 SREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHK 486
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
++AC YF EM++ G+ P F L + L+
Sbjct: 487 LEDACTYFQEMLDVGIRPPATMFSNLKQALL 517
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 111/235 (47%), Gaps = 12/235 (5%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
++G + +YN+L+ + + + I N + +M+ +GI T F+++
Sbjct: 149 QKGFKHTTESYNLLIEALGKIKQFN-------VIWN---LVSDMKRKGILSRET-FALIT 197
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
Y+RA K + +++ M++ G V+ + ++ LC ++ A+E+ +M
Sbjct: 198 RRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFK 257
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P ++Y + + ++ ++YR+M+++ P++ T+ ILI + D
Sbjct: 258 PDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGF-EPDVVTFGILINAHCKARKYDEAIR 316
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+++ ++ + + LI+GL +++ KEA ++F ++ G P+ T+ +
Sbjct: 317 LFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAV 371
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 111 KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
K+KG T +Y +++ L + L+ +M R G+ S ET+ + Y +
Sbjct: 148 KQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGIL-SRETFALITRRYARARKV 206
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
A++ + +M++ + + +N L+ + +E+++ +K D+ SYT+
Sbjct: 207 KEAVESFEKMEKFGFQM-GVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTI 265
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
L+ G + Q + + + EM ++G P VTF L
Sbjct: 266 LLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGIL 301
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 141/271 (52%), Gaps = 12/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++K YT L+ GW + + EM + G EP+VVT+ +L+N C+ ++
Sbjct: 258 PDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCK------ARKY 311
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ IR +F EM + I+P F +++ + + +L+ +K G P T
Sbjct: 312 DEAIR----LFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPT 367
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQM 180
Y +VV C ++ A ++ EM ++GV P++ TY+ +GRK + A ++++M
Sbjct: 368 YNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRK-SKEAYSVFQRM 426
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P + TY+I+I MF R+DM +IW+ +K + + ++ LI+ LC + K
Sbjct: 427 SREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHK 486
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
++AC YF EM++ G+ P F L + L+
Sbjct: 487 LEDACTYFQEMLDVGIRPPATMFSNLKQALL 517
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 111/235 (47%), Gaps = 12/235 (5%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
++G + +YN+L+ + + + I N + +M+ +GI T F+++
Sbjct: 149 QKGFKHTTESYNLLIEALGKIKQFN-------VIWN---LVSDMKRKGILSRET-FALIT 197
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
Y+RA K + +++ M++ G V+ + ++ LC ++ A+E+ +M
Sbjct: 198 RRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFK 257
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P ++Y + + ++ ++YR+M+++ P++ T+ ILI + D
Sbjct: 258 PDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGF-EPDVVTFGILINAHCKARKYDEAIR 316
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+++ ++ + + LI+GL +++ KEA ++F ++ G P+ T+ +
Sbjct: 317 LFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAV 371
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 111 KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
K+KG T +Y +++ L + L+ +M R G+ S ET+ + Y +
Sbjct: 148 KQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGIL-SRETFALITRRYARARKV 206
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
A++ + +M++ + + +N L+ + +E+++ +K D+ SYT+
Sbjct: 207 KEAVESFEKMEKFGFQM-GVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTI 265
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
L+ G + Q + + + EM ++G P VTF L
Sbjct: 266 LLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGIL 301
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 142/280 (50%), Gaps = 11/280 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y +LI G CK I+ A + L EM +G P+ +TYN +L+G+CR
Sbjct: 148 NTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGK-------- 199
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A++ FD M RG PDV +++ +L + K ++ + KG P TY
Sbjct: 200 --VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTY 257
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S++ L +++AEE+ +MV +G +P+ TY+ + K + A K+ +M +
Sbjct: 258 NSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSK 317
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
VP++ TYNIL+ N +D E+++ + + D+ SY+++++GLC+ K
Sbjct: 318 IG-AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVH 376
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+A F MIE+ L+P VTF L GL ++ L + L
Sbjct: 377 DARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL 416
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 143/298 (47%), Gaps = 17/298 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMA-ERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P+V Y+++I G CK ++ A E +MIERG N V YN L+NG+C+
Sbjct: 111 PDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCK--------- 161
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ I A K+ +EM +G PD +++ +L R K + + M +G P V
Sbjct: 162 -DENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVV 220
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ L G+ ++A +L +++ G P TYN + + + A +++++M
Sbjct: 221 AYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKM 280
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C PN TY+I++ ++D ++ + D+ +Y +L+ GLC+
Sbjct: 281 VASG-CAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNL 339
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITF 293
+A + F M++ G P V++ + GL +++ + R L ++KL + +TF
Sbjct: 340 VDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTF 397
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 138/294 (46%), Gaps = 17/294 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +++ G C++ ++ A++F M RG P+VV YN LL+ + +
Sbjct: 181 VPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYK--------- 231
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E A K+F ++ +G PD +++ +L +R + + M G P A
Sbjct: 232 -EGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGA 290
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+ V+ C +++DA ++L EM + G P TYN + A +L+ M
Sbjct: 291 TYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D+ C P+I +Y++++ N++ R +++ + +L D+ ++ +L+ GLC+ K
Sbjct: 351 V-DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGK 409
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL------IQSDMLRTWRRLKKKLDE 288
EA +M G P V + TL GL IQ+D L + K L +
Sbjct: 410 LDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 142/286 (49%), Gaps = 12/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + ++ +CK ++ + +M++ G+ P+ + YN+L++G ++
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGR------- 58
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++++EM G+EP + +++ +L+ + + K + +++ M EKG P V T
Sbjct: 59 ---VDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVT 115
Query: 122 YTSVVKCLCSCGRIEDAEELL-GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y++++ LC G++ +A E+L +M+ G S + YN ++ A KL +M
Sbjct: 116 YSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM 175
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
VP+ TYN ++ + ++ ++ ++ + D+ +Y L+ L ++ K
Sbjct: 176 ASKGY-VPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGK 234
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EA + F ++I KG +P VT+ ++ GL + + + KK+
Sbjct: 235 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKM 280
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 101/240 (42%), Gaps = 49/240 (20%)
Query: 33 RGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
R PN T+ V+L C++ L R+ K+F++M GI PD ++I++
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKL----------RDGYKLFEQMLDNGISPDGIEYNILID 51
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
Y++ GR+++A L EMV G+ P
Sbjct: 52 GYAKK-----------------------------------GRVDEANRLYEEMVSVGLEP 76
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
S TYN + AM+L++ M E P++ TY+ +I ++ E+
Sbjct: 77 SIYTYNSLLNAFCKETKMKEAMELFKTMAEKGF-EPDVVTYSTIISGLCKTGKVTEALEM 135
Query: 213 WNHVKGSELGLDLD--SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
H K E G + +Y LI+GLC+ + + A + EM KG +P +T+ T+ GL
Sbjct: 136 LFH-KMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGL 194
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 147/287 (51%), Gaps = 12/287 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ K Y+ L+ GW K + A EM+ G P++VTY ++++ +C+
Sbjct: 156 VPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGR------ 209
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A + +EM +P +S+++H Y ++ + ++ M+ GI P VA
Sbjct: 210 ----VDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVA 265
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C R+++ +L EM GV+P++ T+N GR + + A +++ +M
Sbjct: 266 VYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRM 325
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +C P+ TY ++I MF + + ++W ++K + ++ +LI+GLCEK
Sbjct: 326 IK--VCEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGD 383
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+AC EMIEKG+ P VTF L + LI+ + L+KK++
Sbjct: 384 VTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGREDVLKFLQKKIN 430
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 104/213 (48%), Gaps = 2/213 (0%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
+V +F I++ Y+RA K + ++ N M + + P +A + ++ LC + A+E+
Sbjct: 89 NVETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIF 148
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
+ +++ P ++TY+ + + + A +++R+M + C P+I TY I++ +
Sbjct: 149 -DSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNG-CRPDIVTYGIMVDVLCK 206
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
R+D I N + + Y++L+H + + ++A F+EM G+ P
Sbjct: 207 AGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAV 266
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
+ L +++ L+ R+ ++D + +T S
Sbjct: 267 YNALIGAFCKANRLKNVYRVLNEMDCKGVTPNS 299
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 146/287 (50%), Gaps = 12/287 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ K YT L+ GW K + A EM++ G P++VTY ++++ +C+
Sbjct: 156 VPDSKTYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGR------ 209
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A + EM + +P +S+++H Y ++ + ++D M++ G+ VA
Sbjct: 210 ----VDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVA 265
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C + ++ +L EM G+ P++ T N R + + A +++R+M
Sbjct: 266 AYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRM 325
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +C P+ TY ++I MF N ++M ++W ++K + ++++LI+GLCE+
Sbjct: 326 IK--VCEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSMHTFSVLINGLCEEGD 383
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
AC +MIEKG+ P VTF L LI+ L++K++
Sbjct: 384 VSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKEGREDVLEFLQQKIN 430
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 41/250 (16%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
+V +F I++ Y+RA K + ++ N M++ + P +A + + LC + A+E+
Sbjct: 89 NVETFCIIMRKYARAQKLEEAVYTFNVMEKYDVPPNLAAFNGLFSALCKSKNVRKAQEIF 148
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
+ ++ P ++TY + + + A +++R+M D C P+I TY I++ +
Sbjct: 149 -DSSKDRFVPDSKTYTILLEGWGKTPNLPKAREIFREMV-DVGCSPDIVTYGIMVDILCK 206
Query: 203 LNR----MDMVRE--------------IWNHVKGSE----------LGL-------DLDS 227
R +D+V+E + H G E LG+ D+ +
Sbjct: 207 AGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVAA 266
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLK 283
Y LI C+ K+K + EM KG+ P T + LI + R +RR+
Sbjct: 267 YNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRMI 326
Query: 284 KKLDEESITF 293
K + ++ T+
Sbjct: 327 KVCEPDADTY 336
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 150/316 (47%), Gaps = 26/316 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP--- 57
+PNV Y +LI G+CK+ +ID L M +G+EPN+++YNV++NG+CR +
Sbjct: 237 LPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISF 296
Query: 58 -----NERF-----------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
N+R E A + EM G+ P V +++ ++H
Sbjct: 297 VLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMC 356
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A + + L+ M+ +G+CP TYT++V G + +A +L EM+ NG SPS
Sbjct: 357 KAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVV 416
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN + A+ + MKE L P++ +Y+ ++ F +D +
Sbjct: 417 TYNALINGHCIAGKMVDAIAVLEDMKEKGL-TPDVVSYSTVLSGFCRSYDVDEALRVKRK 475
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ + D +Y+ LI G CE+++ KEAC F EM+ GL P + T+ L
Sbjct: 476 MVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 276 LRTWRRLKKKLDEESI 291
L+ +L ++ E+ +
Sbjct: 536 LQKAIQLHNEMVEKGV 551
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 146/304 (48%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y LI G+C +D+A RF M ++G PNVVTYN L++G C+
Sbjct: 203 PNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKL--------- 253
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I + ++ M ++G+EP++ S+++V++ R + + L M ++G T
Sbjct: 254 -RKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C G A + EM+R+G+SPS TY + N A + QM+
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
LC PN TY L+ F M+ + + + + +Y LI+G C K
Sbjct: 373 VRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKM 431
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRL-KKKLDEESITFGSE 296
+A +M EKGL P V++ T+ G +S + LR R++ K + ++IT+ S
Sbjct: 432 VDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSL 491
Query: 297 FQNY 300
Q +
Sbjct: 492 IQGF 495
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 143/303 (47%), Gaps = 32/303 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + YT+L+ G+ + ++ A R L EMI+ G P+VVTYN L+NG C
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHC----------I 427
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A V ++M+ +G+ PDV S+S VL + R++ +L M KGI P T
Sbjct: 428 AGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTIT 487
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S+++ C R ++A +L EM+R G+ P TY Y D A++L+ +M
Sbjct: 488 YSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMV 547
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVRE--------IWNHVKGSEL----------GL 223
E + +P++ TY++LI LN+ RE + S++ +
Sbjct: 548 EKGV-LPDVVTYSVLIN---GLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
+ S LI G C K EA Q F M+EK P + + G + +R L
Sbjct: 604 EFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLY 663
Query: 284 KKL 286
K++
Sbjct: 664 KEM 666
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 29/292 (9%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
++ ++ + ++ ID A + G P V++YN +L+ R ++ I
Sbjct: 136 VFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRS---------KRNI 186
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
AE VF EM + P+V +++I++ + A ++L + M++KG P V TY ++
Sbjct: 187 SFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTL 246
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ C +I+D ELL M G+ P+ +YN NG + R MKE
Sbjct: 247 IDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVI---------NGLCREGR-MKEISF 296
Query: 186 CVPNIH---------TYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+ ++ TYN LI + + + L + +YT LIH +C
Sbjct: 297 VLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMC 356
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD-MLRTWRRLKKKLD 287
+ A ++ +M +GL P + T+ TL G Q M +R LK+ +D
Sbjct: 357 KAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMID 408
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 97/228 (42%), Gaps = 41/228 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
P+ YT+LI +C + A + EM+E+GV P+VVTY+VL+NG+ ++A
Sbjct: 518 PDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRL 577
Query: 54 --------SLHPNERFEKTIRN------------------------AEKVFDEMRVRGIE 81
S+ + + I N A++VF+ M + +
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHK 637
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
PD T++++++H + R + + M + G T ++VK L G++ + +
Sbjct: 638 PDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSV 697
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
+ ++R+ AE + + + + + +M +D +PN
Sbjct: 698 IANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF-LPN 744
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 147/296 (49%), Gaps = 19/296 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y ++I +CK+ +I A + L M +G+ PN+++YNV++NG+CR
Sbjct: 235 LPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCR--------- 285
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E ++ ++ +EM R PD +F+ +++ Y +L M + G+ P V
Sbjct: 286 -EGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV 344
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ +C G + A E L +M G+ P+ TY + + A ++ ++M
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E+ P I TYN LI L RM+ + + D+ SY+ +I G C Q+
Sbjct: 405 VENGF-TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQE 463
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD--EESITFG 294
++A Q VEM+ KG+ P T+ +L +GL + RRL + D +E ++ G
Sbjct: 464 LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQ------RRLGEVCDLFQEMLSLG 513
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 142/292 (48%), Gaps = 12/292 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + +LI G+C + A EM++ G+ PNVVTY L+N +C+ +L+
Sbjct: 305 VPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN---- 360
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + D+MR RG+ P+ +++ ++ +S+ + + + M E G PT+
Sbjct: 361 ------RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTII 414
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ C GR+EDA LL EM+ G P +Y+ + ++ A +L +M
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P++ TY+ LI R+ V +++ + L D +YT LI+ C +
Sbjct: 475 VAKGIS-PDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL-IQSDMLRTWRRLKKKLDEESI 291
+A + EMI+KG P VT+ L G QS R L K L EES+
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV 585
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 26/269 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + YT+LI G+ + + A + + EM+E G P ++TYN L+NG C +
Sbjct: 376 PNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM------ 429
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A + EM RG PDV S+S ++ + R + + + M KGI P VAT
Sbjct: 430 ----EDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S+++ LC R+ + +L EM+ G+ P TY Y D + A++L+ +M
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREI---------------WNHVKGSELGLDLD 226
+ P+I TYN+LI F +R + + +N + + L+
Sbjct: 546 QKGFS-PDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFK 604
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
S L+ G C K EA + M++KG
Sbjct: 605 SALALMKGFCMKGLMNEADRVLESMLQKG 633
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y +LI G C + R++ A L EMIERG P+VV+Y+ +++G CR N+
Sbjct: 411 PTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCR------NQEL 464
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK A ++ EM +GI PDV ++S ++ + + D M G+ P T
Sbjct: 465 EK----AFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVT 520
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ C G ++ A L EM++ G SP TYN + + A +L ++
Sbjct: 521 YTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLL 580
Query: 182 EDDLCVPNIHTYNILI----------------GMFMA--LNRMDMVREIWNHVKGSELGL 223
++ VPN TYN LI G M +N D V E KG +L
Sbjct: 581 YEE-SVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQ-KGYKLNE 638
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ Y ++IHG + ++A + EM+ G P VT L + L
Sbjct: 639 EV--YNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSL 683
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 128/277 (46%), Gaps = 10/277 (3%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75
++N I+ A + G P V++YN +L+ V R +++++ AE +F EM
Sbjct: 144 RVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRT---------KQSVKIAEGIFKEM 194
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
G+ P+V +++I++ + A ++ L M+ G P V TY +++ C +I
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
+A +LL M G++P+ +YN ++ +M + VP+ T+N
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRY-VPDRVTFNT 313
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
LI + + + + + L ++ +YT LI+ +C+ A ++ +M ++G
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
L P T+ TL G Q L+ ++ K++ E T
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFT 410
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 147/288 (51%), Gaps = 15/288 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV--CRRASLHPNE 59
P+++ YT L+ GWC++ + A R EMI+RG P+VV +NV+L G+ C++ S
Sbjct: 339 PSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKS----- 393
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+A K+F+ M+ +G P+V S++I++ + + +++ + M ++G P
Sbjct: 394 -------DAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDA 446
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
A YT ++ +++ LL EM G P TYN K + + A+++Y++
Sbjct: 447 ALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKK 506
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + + P IHTYN+++ + +M EIW+ + D +SY + I GL +
Sbjct: 507 MIQSGI-KPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQD 565
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+ EAC+Y EM+EKG+ K+ + + ++ L +K++
Sbjct: 566 RSGEACKYLEEMLEKGMKAPKLDYNKFASDISKTGNAVILEELARKMN 613
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 2/229 (0%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + A +FD M+ G + V + +L S A + + +K++ P++ TY
Sbjct: 286 KQRKKAVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDR-FTPSLQTY 344
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++ C + +A + EM+ G +P +N + K + A+KL+ MK
Sbjct: 345 TILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKA 404
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
PN+ +Y I+I F M E ++ + D YT LI G ++K
Sbjct: 405 KGPS-PNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMD 463
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM E+G P T+ L + + M R+ KK+ + I
Sbjct: 464 MVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGI 512
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 99/201 (49%), Gaps = 5/201 (2%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+ +EM +G+ + +FSI + ++ A + + ++ + MK+ G V ++ L
Sbjct: 260 MLEEMGEKGLL-TMETFSIAIKAFAEAKQRKKAVGIFDLMKKYGFKVGVDVINFLLDSLS 318
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
+ ++A+ + E +++ +PS +TY + K+ A +++ +M + P++
Sbjct: 319 TAKLGKEAQAVF-EKLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGF-NPDV 376
Query: 191 HTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+N+++ G+ + D ++ ++ +K ++ SYT++I C+++ EA +YF
Sbjct: 377 VAHNVMLEGLLKCKKKSDAIK-LFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFD 435
Query: 250 EMIEKGLLPQKVTFETLYRGL 270
M+++G P + L G
Sbjct: 436 VMVDRGCQPDAALYTCLITGF 456
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 147/296 (49%), Gaps = 19/296 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y ++I +CK+ +I A + L M +G+ PN+++YNV++NG+CR
Sbjct: 235 LPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCR--------- 285
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E ++ ++ +EM R PD +F+ +++ Y +L M + G+ P V
Sbjct: 286 -EGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV 344
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ +C G + A E L +M G+ P+ TY + + A ++ ++M
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E+ P I TYN LI L RM+ + + D+ SY+ +I G C Q+
Sbjct: 405 VENGF-TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQE 463
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD--EESITFG 294
++A Q VEM+ KG+ P T+ +L +GL + RRL + D +E ++ G
Sbjct: 464 LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQ------RRLGEVCDLFQEMLSLG 513
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 142/292 (48%), Gaps = 12/292 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + +LI G+C + A EM++ G+ PNVVTY L+N +C+ +L+
Sbjct: 305 VPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN---- 360
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + D+MR RG+ P+ +++ ++ +S+ + + + M E G PT+
Sbjct: 361 ------RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTII 414
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ C GR+EDA LL EM+ G P +Y+ + ++ A +L +M
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P++ TY+ LI R+ V +++ + L D +YT LI+ C +
Sbjct: 475 VAKGIS-PDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL-IQSDMLRTWRRLKKKLDEESI 291
+A + EMI+KG P VT+ L G QS R L K L EES+
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV 585
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 26/269 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + YT+LI G+ + + A + + EM+E G P ++TYN L+NG C +
Sbjct: 376 PNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM------ 429
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A + EM RG PDV S+S ++ + R + + + M KGI P VAT
Sbjct: 430 ----EDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S+++ LC R+ + +L EM+ G+ P TY Y D + A++L+ +M
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREI---------------WNHVKGSELGLDLD 226
+ P+I TYN+LI F +R + + +N + + L+
Sbjct: 546 QKGFS-PDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFK 604
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
S L+ G C K EA + M++KG
Sbjct: 605 SALALMKGFCMKGLMNEADRVLESMLQKG 633
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y +LI G C + R++ A L EMIERG P+VV+Y+ +++G CR N+
Sbjct: 411 PTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCR------NQEL 464
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK A ++ EM +GI PDV ++S ++ + + D M G+ P T
Sbjct: 465 EK----AFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVT 520
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ C G ++ A L EM++ G SP TYN + + A +L ++
Sbjct: 521 YTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLL 580
Query: 182 EDDLCVPNIHTYNILI----------------GMFMA--LNRMDMVREIWNHVKGSELGL 223
++ VPN TYN LI G M +N D V E KG +L
Sbjct: 581 YEE-SVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQ-KGYKLNE 638
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ Y ++IHG + ++A + EM+ G P VT L + L
Sbjct: 639 EV--YNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSL 683
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 128/277 (46%), Gaps = 10/277 (3%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75
++N I+ A + G P V++YN +L+ V R +++++ AE +F EM
Sbjct: 144 RVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRT---------KQSVKIAEGIFKEM 194
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
G+ P+V +++I++ + A ++ L M+ G P V TY +++ C +I
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
+A +LL M G++P+ +YN ++ +M + VP+ T+N
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRY-VPDRVTFNT 313
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
LI + + + + + L ++ +YT LI+ +C+ A ++ +M ++G
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
L P T+ TL G Q L+ ++ K++ E T
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFT 410
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 140/287 (48%), Gaps = 11/287 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + LI C R+ A +M+ RG P+VVTY++LL+ C+ +
Sbjct: 160 PDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGY------ 213
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R A + DEMR +G EPD+ +++++++ +L+ L+ + G P T
Sbjct: 214 ----RQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVT 269
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT V+K LC R ++ EEL EM N +P T+N + + A+K+ M
Sbjct: 270 YTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMS 329
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C+P+I TY+ ++ + R+D E+ + +K D +YT ++ GLC ++W
Sbjct: 330 EHG-CIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQW 388
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ A + EM+ P +VTF T+ L Q ++ ++ +++ E
Sbjct: 389 EHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSE 435
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 126/275 (45%), Gaps = 11/275 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT ++ C R E EM P+ VT+N ++ +C++
Sbjct: 265 PDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQG-------- 316
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A KV D M G PD+ ++S +L + +++ L+ +K G P
Sbjct: 317 --LVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIA 374
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+V+K LCS + E AEEL+ EMV + P T+N + + A+K+ QM
Sbjct: 375 YTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMS 434
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ C P+I TYN +I +D E+ ++++ D+ ++ L+ GLC +W
Sbjct: 435 ENG-CNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRW 493
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
++A Q V M+ P TF T+ L Q +L
Sbjct: 494 EDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLL 528
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 143/299 (47%), Gaps = 15/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+++ G C I + + AE + EM+ P+ VT+N ++ +C++
Sbjct: 370 PDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKG-------- 421
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A KV ++M G PD+ +++ ++ +++ L+ ++ G P + T
Sbjct: 422 --LVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVT 479
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++K LCS R EDAE+L+ M+ + P A T+N + A++ + M
Sbjct: 480 FNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMA 539
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-DLDSYTMLIHGLCEKQK 240
E+ C+PN TYNI++ AL + +E + G G DL +Y +I + + K
Sbjct: 540 ENG-CIPNQSTYNIVVD---ALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGK 595
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+EA M+ GL P +T+ +L G+ + D R+ +L + ++ + F N
Sbjct: 596 MEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYN 654
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 76/195 (38%), Gaps = 33/195 (16%)
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLG------------------------------ 143
G TV TY ++V C GRIEDA L+
Sbjct: 125 GASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAV 184
Query: 144 --EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
+M+ G SPS TY+ AM L +M+ C P+I TYN+LI
Sbjct: 185 FDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKG-CEPDIVTYNVLINAMC 243
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
+D I + + D +YT ++ LC ++WKE + F EM P +V
Sbjct: 244 NEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEV 303
Query: 262 TFETLYRGLIQSDML 276
TF T+ L Q ++
Sbjct: 304 TFNTIVTSLCQQGLV 318
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
P++ + +L+ G C ++R + AE+ + M+ P+ T+N ++ +C++ L
Sbjct: 475 PDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIET 534
Query: 57 ----------PNERFEKTIRNA----EKVFDEMRV-RGIE---PDVTSFSIVLHVYSRAH 98
PN+ + +A K + +++ G+ PD+ +++ V+ ++A
Sbjct: 535 LKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAG 594
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
K + +LD L M G+ P TY S+ +C + A +L + G+SP A YN
Sbjct: 595 KMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYN 654
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
+ + A+ + M C+P+ TY IL+
Sbjct: 655 DILLGFCQNWRTDIAIDCFAHMVSSG-CMPDESTYIILL 692
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++I K +++ A L M+ G+ P+ +TY L G+CR
Sbjct: 578 PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICR---------- 627
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A ++ ++ G+ PD T ++ +L + + + +++D M G P +T
Sbjct: 628 EDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDEST 687
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
Y +++ L +++A++LL + GV
Sbjct: 688 YIILLEALAYECLLDEAKQLLVNLCSLGV 716
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 141/290 (48%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y +++YG CKI + D A+ L EM++ G+ PN TYN LL +CRR
Sbjct: 325 PGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR--------- 375
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A+++FDEM RG+ PD+ SFS ++ V +R +L M+ GI P
Sbjct: 376 -DNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVI 434
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ C G + DA ++ EM+ G TYN F +K A L+ +M
Sbjct: 435 YTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV 494
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + VP+ +T+ LI + MD ++ + + L D +Y LI G C+ +
Sbjct: 495 ERGM-VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + + +MI K ++P +++ T+ G S +L L ++ E+ I
Sbjct: 554 GRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 136/261 (52%), Gaps = 15/261 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +T+LI G+CK +D A M+ ++P+ VTYN L++G C+ +
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMG---- 554
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A++++D+M + I PD S+ VL+ + + +L+ + M EKGI P +
Sbjct: 555 ------RAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLV 608
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +++K C G + A E L +M+ NG+ P + +YN Y + A L +M
Sbjct: 609 TCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEM 668
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLCEK 238
++ L NI TYN+++ F A +M ++ K E+G++ D +Y+ LI+G +
Sbjct: 669 EKRGLQF-NIITYNLILNGFCAEGKMQEAEQVLR--KMIEIGINPDGATYSSLINGHVSQ 725
Query: 239 QKWKEACQYFVEMIEKGLLPQ 259
KEA ++ EM+++GL+P
Sbjct: 726 DNMKEAFRFHDEMLQRGLVPD 746
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 150/332 (45%), Gaps = 46/332 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT LI G+C+ + A + EM+ RG +VVTYN LNG+C++
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK-------- 480
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIV-------------LHVYSRAHKPQLSLDKL 107
K +A+ +F+EM RG+ PD +F+ + L+++ + L DK+
Sbjct: 481 --KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKV 538
Query: 108 NF----------------------MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
+ M K I P +Y +V+ CS G + +A L +M
Sbjct: 539 TYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQM 598
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+ G+ P+ T N K Y D A + +M + + +P+ +YN LI ++
Sbjct: 599 LEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGI-IPDSFSYNTLIDGYLKEAN 657
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
++ + N ++ L ++ +Y ++++G C + K +EA Q +MIE G+ P T+ +
Sbjct: 658 LEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSS 717
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
L G + D ++ R ++ + + F
Sbjct: 718 LINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 749
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 46/295 (15%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
L+ G + +D+A GE++ G+E NV T N+++N +C+ + +FE N
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCK------DRKFE----NVM 277
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+M +G+ D+ +++ +++ Y R + + LN +G+ P + TY +++ L
Sbjct: 278 FFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGL 337
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCF----------------------------- 160
C G+ + A+++L EM++ G++P+A TYN
Sbjct: 338 CKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDL 397
Query: 161 --FKEYRGRKDANG----AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
F G NG A+ +R+M+ + VP+ Y ILI F + ++ +
Sbjct: 398 VSFSSLIGVLARNGHLYQALMHFREMERSGI-VPDNVIYTILIDGFCRNGALSDALKMRD 456
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ +D+ +Y ++GLC+K+ + +A F EM+E+G++P TF TL RG
Sbjct: 457 EMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRG 511
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
+ +++ Y +A K + + ++ KG+ ++ ++ L G ++ A E+ GE+V
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
R G+ + T N + M M E +I TYN LI + +
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDM-EGKGVFADIVTYNTLINAYCREGLV 308
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ N + L +Y +++GLC+ K+ A +EM++ GL P T+ TL
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 5/206 (2%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K +R + F +R +G+ + + + +L R L+ + + GI V T
Sbjct: 201 KKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTL 260
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+V LC + E+ L +M GV TYN Y A +L
Sbjct: 261 NIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSS 320
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQK 240
+ P + TYN ++ + + D +++ ++ +LGL + +Y L+ +C +
Sbjct: 321 RGM-EPGLLTYNAILYGLCKIGKYDRAKDVL--IEMLQLGLTPNAATYNTLLVEICRRDN 377
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
EA + F EM +G+LP V+F +L
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSL 403
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 141/272 (51%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI+G N+ A + M++RG +PN+VTY V++NG+C+R
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD------- 240
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + ++M IE +V +S V+ + +L+ M+ KG+ P V T
Sbjct: 241 ---IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 297
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLC+ R DA LL +M+ ++P+ T+N + A KLY +M
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TY+ LI F +R+D + ++ + + ++ +Y LI+G C+ ++
Sbjct: 358 KRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
E + F EM ++GL+ VT+ TL G Q+
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 142/289 (49%), Gaps = 11/289 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI C R A R L +MIER + PNVVT+N L++ +
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK---------- 342
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK++DEM R I+PD+ ++S +++ + + + M K P V T
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C RI++ EL EM + G+ + TY + +D + A +++QM
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + PNI TYN L+ +++ ++ +++ S++ + +Y ++I G+C+ K
Sbjct: 463 SDGV-HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
++ F + KG+ P + + T+ G + + L +K+ E+
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 26/315 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RRAS------ 54
N+ Y LI +C+ ++I +A LG+M++ G EP++VT + LLNG C +R S
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 55 -------LHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
P+ T+ A + D M RG +P++ ++ +V++ +
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
L+ + LN M+ I V Y++V+ LC +DA L EM GV P+ TY
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
+ + + A +L M E + PN+ T+N LI F+ ++ ++++ +
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKIN-PNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+ D+ +Y+ LI+G C + EA F MI K P VT+ TL G ++ +
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 278 TWRRLKKKLDEESIT 292
L +++ + +
Sbjct: 418 EGVELFREMSQRGLV 432
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 138/306 (45%), Gaps = 18/306 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNE 59
+P++ + L+ K+ + D+ LGE ++R G+ N+ TYN+L+N CRR+
Sbjct: 82 LPSIFEFNKLLSAIAKMKKFDLVIS-LGEKMQRLGISHNLYTYNILINCFCRRSQ----- 135
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
I A + +M G EP + + S +L+ Y + ++ ++ M E G P
Sbjct: 136 -----ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+T+++ L + +A L+ MV+ G P+ TY R D + A L +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ + N+ Y+ +I D ++ ++ + ++ +Y+ LI LC +
Sbjct: 251 MEAAKI-EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE 309
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFG 294
+W +A + +MIE+ + P VTF L ++ L +L K+ +D + T+
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 295 SEFQNY 300
S +
Sbjct: 370 SLINGF 375
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N YT+LI+G+ + D A+ +M+ GV PN++TYN LL+G+C+ N + E
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK------NGKLE 487
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K A VF+ ++ +EP + +++I++ +A K + D + KG+ P V Y
Sbjct: 488 K----AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+++ C G E+A+ L +M +G P + T
Sbjct: 544 NTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 124/309 (40%), Gaps = 50/309 (16%)
Query: 37 PNVVTYNVLLNGVC--RRASLHPNERFEKTIRN---------AEKVFDEMRVRGIEPDVT 85
P + ++ L G+C RA + + + +RN A +F M P +
Sbjct: 27 PRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIF 86
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
F+ +L ++ K L + M+ GI + TY ++ C C +I A LLG+M
Sbjct: 87 EFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 146
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE-----DDL--------------- 185
++ G PS T + Y K + A+ L QM E D +
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 186 --------------CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
C PN+ TY +++ +D+ + N ++ +++ ++ Y+ +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKL 286
I LC+ + +A F EM KG+ P +T+ +L L + RL ++K+
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 287 DEESITFGS 295
+ +TF +
Sbjct: 327 NPNVVTFNA 335
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 141/290 (48%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y +++YG CKI + D A+ L EM++ G+ PN TYN LL +CRR
Sbjct: 325 PGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR--------- 375
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A+++FDEM RG+ PD+ SFS ++ V +R +L M+ GI P
Sbjct: 376 -DNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVI 434
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ C G + DA ++ EM+ G TYN F +K A L+ +M
Sbjct: 435 YTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV 494
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + VP+ +T+ LI + MD ++ + + L D +Y LI G C+ +
Sbjct: 495 ERGM-VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + + +MI K ++P +++ T+ G S +L L ++ E+ I
Sbjct: 554 GRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 136/261 (52%), Gaps = 15/261 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +T+LI G+CK +D A M+ ++P+ VTYN L++G C+ +
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMG---- 554
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A++++D+M + I PD S+ VL+ + + +L+ + M EKGI P +
Sbjct: 555 ------RAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLV 608
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +++K C G + A E L +M+ NG+ P + +YN Y + A L +M
Sbjct: 609 TCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEM 668
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLCEK 238
++ L NI TYN+++ F A +M ++ K E+G++ D +Y+ LI+G +
Sbjct: 669 EKRGLQF-NIITYNLILNGFCAEGKMQEAEQVLR--KMIEIGINPDGATYSSLINGHVSQ 725
Query: 239 QKWKEACQYFVEMIEKGLLPQ 259
KEA ++ EM+++GL+P
Sbjct: 726 DNMKEAFRFHDEMLQRGLVPD 746
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 150/332 (45%), Gaps = 46/332 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT LI G+C+ + A + EM+ RG +VVTYN LNG+C++
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK-------- 480
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIV-------------LHVYSRAHKPQLSLDKL 107
K +A+ +F+EM RG+ PD +F+ + L+++ + L DK+
Sbjct: 481 --KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKV 538
Query: 108 NF----------------------MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
+ M K I P +Y +V+ CS G + +A L +M
Sbjct: 539 TYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQM 598
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+ G+ P+ T N K Y D A + +M + + +P+ +YN LI ++
Sbjct: 599 LEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGI-IPDSFSYNTLIDGYLKEAN 657
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
++ + N ++ L ++ +Y ++++G C + K +EA Q +MIE G+ P T+ +
Sbjct: 658 LEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSS 717
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
L G + D ++ R ++ + + F
Sbjct: 718 LINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 749
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 46/295 (15%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
L+ G + +D+A GE++ G+E NV T N+++N +C+ + +FE N
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCK------DRKFE----NVM 277
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+M +G+ D+ +++ +++ Y R + + LN +G+ P + TY +++ L
Sbjct: 278 FFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGL 337
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCF----------------------------- 160
C G+ + A+++L EM++ G++P+A TYN
Sbjct: 338 CKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDL 397
Query: 161 --FKEYRGRKDANG----AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
F G NG A+ +R+M+ + VP+ Y ILI F + ++ +
Sbjct: 398 VSFSSLIGVLARNGHLYQALMHFREMERSGI-VPDNVIYTILIDGFCRNGALSDALKMRD 456
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ +D+ +Y ++GLC+K+ + +A F EM+E+G++P TF TL RG
Sbjct: 457 EMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRG 511
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
+ +++ Y +A K + + ++ KG+ ++ ++ L G ++ A E+ GE+V
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
R G+ + T N + M M E +I TYN LI + +
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDM-EGKGVFADIVTYNTLINAYCREGLV 308
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ N + L +Y +++GLC+ K+ A +EM++ GL P T+ TL
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 5/206 (2%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K +R + F +R +G+ + + + +L R L+ + + GI V T
Sbjct: 201 KKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTL 260
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+V LC + E+ L +M GV TYN Y A +L
Sbjct: 261 NIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSS 320
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQK 240
+ P + TYN ++ + + D +++ ++ +LGL + +Y L+ +C +
Sbjct: 321 RGM-EPGLLTYNAILYGLCKIGKYDRAKDVL--IEMLQLGLTPNAATYNTLLVEICRRDN 377
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
EA + F EM +G+LP V+F +L
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSL 403
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 139/293 (47%), Gaps = 11/293 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT LI G C R+ A L +M+ R +P+VVTY VLL VC+ +
Sbjct: 135 PDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFG----- 189
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A KV DEMR +G P++ +++++++ R + + LN + G P +
Sbjct: 190 -----QAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVS 244
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+V+K LC+ R ED E L EMV N P+ T++ + + A+++ +M
Sbjct: 245 YTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMS 304
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C N NI+I R+D E N++ D SYT ++ GLC +W
Sbjct: 305 EHG-CTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRW 363
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
++A + EM+ K P +VTF T L Q ++ L +++ E + G
Sbjct: 364 EDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVG 416
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 140/316 (44%), Gaps = 29/316 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PN+ Y +I G C+ +R+D A + L + G +P+ V+Y +L G+C
Sbjct: 205 PNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVL 264
Query: 54 -------SLHPNE-RFEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ PNE F+ +R A +V D M G + T +IV++ +
Sbjct: 265 FCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICK 324
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + LN M G P +YT+V+K LC GR EDA+ELL EMVR P+ T
Sbjct: 325 QGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVT 384
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N F + + A+ L QM E C I TYN L+ F R+D E++N +
Sbjct: 385 FNTFICILCQKGLIDQAILLIEQMPEYG-CSVGIVTYNALVNGFCVQGRVDSALELFNSL 443
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ +YT L+ GLC ++ A + EM++ VTF L Q +
Sbjct: 444 PCEP---NTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFV 500
Query: 277 RTWRRLKKKLDEESIT 292
L +++ E T
Sbjct: 501 EEAIELVQQMMEHGCT 516
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 128/286 (44%), Gaps = 18/286 (6%)
Query: 17 INRIDMAE--RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
I R D+AE R + RG P+V L+ +CRR R +R AE
Sbjct: 46 IARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAAR---VLRTAEG---- 98
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN-FMKEKGICPTVATYTSVVKCLCSCG 133
G DV +++ ++ Y R + LD + + P TYT +++ LC G
Sbjct: 99 ---SGAPVDVFAYNTLVAGYCRYGR----LDAARRLIASMPVPPDAYTYTPLIRGLCDRG 151
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
R+ DA LL +M+R PS TY + AMK+ +M+ C PNI TY
Sbjct: 152 RVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKG-CTPNIVTY 210
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N++I +R+D R+I N + D SYT ++ GLC ++W++ F EM+E
Sbjct: 211 NVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVE 270
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+P +VTF+ L R + M+ + ++ E T + N
Sbjct: 271 NNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCN 316
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+L+ G C R+D A L EM++ NVVT+NVL++ C++
Sbjct: 447 PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKG-------- 498
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++ +M G P++ +F+ +L + + +L+ L+ + KGI T
Sbjct: 499 --FVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTIT 556
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S+V L RIE+A ++ + G+ P A YN R + + A+ + M
Sbjct: 557 YSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMV 616
Query: 182 EDDLCVPNIHTYNILI 197
+ C+PN TY ILI
Sbjct: 617 SNS-CMPNESTYVILI 631
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 10/79 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P MY ++ CK D A F M+ PN TY +L+ G+ R
Sbjct: 587 PKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAR---------- 636
Query: 62 EKTIRNAEKVFDEMRVRGI 80
E ++ A V E+ RG+
Sbjct: 637 EGLLKEARYVLSELCSRGV 655
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 30/293 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-E 59
+P++ YT+LI G+CK + D A R +++ RG P+VVTY+ L++G+C+ L +
Sbjct: 86 IPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAID 145
Query: 60 RFEKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVY 94
F + I++ A + + M G PDV +++ +++ +
Sbjct: 146 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 205
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ + + D LN M KG+ P V T+TS++ LC R+ DA +LGEM R SP+
Sbjct: 206 CKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 265
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TYN Y A K M E+ C PN+ ++NI+I +NR E+
Sbjct: 266 YTYNTILDGYCRVNQLEEARKF---MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVE 322
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK-GLLPQKVTFETL 266
+ D+ YT +I LC ++K EAC+ + +M+E+ G LP +T+ T
Sbjct: 323 EARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 14/273 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P Y SLI G CK R A L EM+ G P++ TY L+ G C+
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK--------- 101
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTV 119
K +A +VF+++ RG PDV ++S ++ + + + ++D M + G C P
Sbjct: 102 -SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNT 160
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY S++ C G++++A LL M G SP TY + + A L Q
Sbjct: 161 VTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQ 220
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M L PN+ T+ L+ NR+ I ++ + +Y ++ G C
Sbjct: 221 MTRKGL-TPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVN 279
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ +EA ++ +E E P V+F + RGL +
Sbjct: 280 QLEEARKFMLE--EMDCPPNVVSFNIMIRGLCK 310
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 17/264 (6%)
Query: 23 AERFLGEMIERGVE-PNVVTYNVLLNGVCR--RASLHPNERFEKTIRNAEKVFDEMRVRG 79
R G ++ E P VTYN L++G+C+ RAS A + +EM G
Sbjct: 37 GRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERAS------------EAYDLLEEMVYSG 84
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
PD+ +++ ++ + ++ K +L + +G P V TY+ ++ LC GR+++A
Sbjct: 85 CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAI 144
Query: 140 ELLGEMVRNGVS-PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
+L G M+++G P+ TYN + + AM L +M E P++ TY L+
Sbjct: 145 DLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG-SSPDVVTYTTLMN 203
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
F L R+D ++ N + L ++ ++T L+ GLC + + +A EM K P
Sbjct: 204 GFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSP 263
Query: 259 QKVTFETLYRGLIQSDMLRTWRRL 282
T+ T+ G + + L R+
Sbjct: 264 TVYTYNTILDGYCRVNQLEEARKF 287
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 11/187 (5%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
PT TY S++ LC R +A +LL EMV +G P TY + K ++ A+++
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH-VKGSELGLDLDSYTMLIHGL 235
+ Q+ P++ TY+ LI R+ +++ +K + +Y LI G
Sbjct: 112 FEQLVARGF-RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-------SDMLRTWRRLKKKLDE 288
C K EA M E G P VT+ TL G + D+L R K L
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR--KGLTP 228
Query: 289 ESITFGS 295
+TF S
Sbjct: 229 NVVTFTS 235
>gi|224089100|ref|XP_002308636.1| predicted protein [Populus trichocarpa]
gi|222854612|gb|EEE92159.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 153/292 (52%), Gaps = 15/292 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V++Y L+ GW + ++ AER EM ++ V+P+VVTY L+ G R R
Sbjct: 258 VPSVRIYNILLNGWFRSRKLKHAERLWLEMKKKNVKPSVVTYGTLVEGYSRM------RR 311
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA--HKPQLSLDKLNFMKEKGICPT 118
E+ I ++ DEM+ GI+ + ++ ++ + A K L + + F+ E+G PT
Sbjct: 312 VERAI----ELVDEMKREGIKSNAIVYNPIIDALAEAGRFKEVLGMMEHFFLCEEG--PT 365
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
++TY S+VK C G + A ++L M+ V P+ TYN FF+ + + M LY
Sbjct: 366 ISTYNSLVKGYCKAGDLVGASKILKMMISREVFPTPTTYNYFFRHFSKCRKIEEGMNLYT 425
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M E P+ TY++L+ M R+D+ +I ++ +DL + TM H LC+
Sbjct: 426 KMIESGY-TPDRLTYHLLLKMLCEEERLDLAVQISKEMRARGCDMDLATSTMFTHLLCKM 484
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
Q+++EA F +M+ +G++PQ +TF L + + RRL K + S
Sbjct: 485 QRFEEAFAEFEDMLRRGIVPQYLTFHRLNDEFRKQGLTELARRLCKLMSSVS 536
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/96 (18%), Positives = 45/96 (46%)
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
R++++D VP++ YNIL+ + ++ +W +K + + +Y L+ G
Sbjct: 249 RKVEKDPCWVPSVRIYNILLNGWFRSRKLKHAERLWLEMKKKNVKPSVVTYGTLVEGYSR 308
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ + A + EM +G+ + + + L ++
Sbjct: 309 MRRVERAIELVDEMKREGIKSNAIVYNPIIDALAEA 344
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 141/279 (50%), Gaps = 17/279 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +++LI + K ++ A+ EMI RG+ P+ +TYN L++G C+ LH
Sbjct: 341 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH---- 396
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++FD M +G EPD+ ++SI+++ Y +A + + + KG+ P
Sbjct: 397 ------EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 450
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V C G++ A+EL EMV GV PS TY + N A++++ +M
Sbjct: 451 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 510
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + + I YNI+I +++D ++ + + D+ +Y ++I GLC+K
Sbjct: 511 QKSRMTL-GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 569
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYR------GLIQS 273
EA F +M E G P T+ L R GLI S
Sbjct: 570 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 608
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 141/291 (48%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V Y+SLI G C + D + L EMI R + P+VVT++ L++ +
Sbjct: 307 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK---------- 356
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A+++++EM RGI PD +++ ++ + + + + + M KG P + T
Sbjct: 357 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 416
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ C R++D L E+ G+ P+ TYN + N A +L+++M
Sbjct: 417 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 476
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P++ TY IL+ ++ EI+ ++ S + L + Y ++IHG+C K
Sbjct: 477 SRGV-PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 535
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A F + +KG+ P VT+ + GL + L L +K+ E+ T
Sbjct: 536 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 586
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 141/299 (47%), Gaps = 16/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +++L+ G+C R+ A + M+E P++VT + L+NG+C +
Sbjct: 167 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR------- 219
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + D M G +PD ++ VL+ ++ L+LD M+E+ I +V
Sbjct: 220 ---VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 276
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ V+ LC G +DA L EM G+ TY+ + K+ R+M
Sbjct: 277 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 336
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ +P++ T++ LI +F+ ++ +E++N + + D +Y LI G C++
Sbjct: 337 GRNI-IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 395
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK-LDEESITFGS 295
EA Q F M+ KG P VT+ L ++ D +R +R + K L +IT+ +
Sbjct: 396 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 454
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 145/323 (44%), Gaps = 26/323 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-SLHPNER 60
P++ ++LI G C R+ A + M+E G +P+ VTY +LN +C+ S +
Sbjct: 202 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 261
Query: 61 FEK------------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F K + +A +F+EM ++GI+ DV ++S ++
Sbjct: 262 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 321
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K L M + I P V T+++++ G++ +A+EL EM+ G++P T
Sbjct: 322 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 381
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + A +++ M C P+I TY+ILI + R+D ++ +
Sbjct: 382 YNSLIDGFCKENCLHEANQMFDLMVSKG-CEPDIVTYSILINSYCKAKRVDDGMRLFREI 440
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
L + +Y L+ G C+ K A + F EM+ +G+ P VT+ L GL + L
Sbjct: 441 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 500
Query: 277 RTWRRLKKKLDEESITFGSEFQN 299
+ +K+ + +T G N
Sbjct: 501 NKALEIFEKMQKSRMTLGIGIYN 523
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 119/252 (47%), Gaps = 15/252 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y+ LI +CK R+D R E+ +G+ PN +TYN L+ G C+ L+
Sbjct: 412 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA---- 467
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+++F EM RG+ P V ++ I+L + +L+ M++ + +
Sbjct: 468 ------AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 521
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ +C+ +++DA L + GV P TYN + + A L+R+MK
Sbjct: 522 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 581
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
ED C P+ TYNILI + + + E+ +K D + M+I L +++
Sbjct: 582 EDG-CTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLD 640
Query: 242 KEACQYFVEMIE 253
K F++M+
Sbjct: 641 KS----FLDMLS 648
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y +L+ G+C+ +++ A+ EM+ RGV P+VVTY +LL+G+C L+
Sbjct: 446 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN---- 501
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++F++M+ + + ++I++H A K + + +KG+ P V
Sbjct: 502 ------KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 555
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC G + +A+ L +M +G +P TYN + + G +++L +M
Sbjct: 556 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 615
Query: 181 K 181
K
Sbjct: 616 K 616
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 136/308 (44%), Gaps = 22/308 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + L + + D+ F M G+E ++ T +++N CR+
Sbjct: 96 LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRK-------- 147
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY---SRAHKPQLSLDKLNFMKEKGICP 117
K + A V G EPD +FS +++ + R + +D++ MK++ P
Sbjct: 148 --KKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR---P 202
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ T ++++ LC GR+ +A L+ MV G P TY ++ A+ L+
Sbjct: 203 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 262
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
R+M+E ++ ++ Y+I+I D ++N ++ + D+ +Y+ LI GLC
Sbjct: 263 RKMEERNI-KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 321
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESIT 292
KW + + EMI + ++P VTF L ++ L + L + + ++IT
Sbjct: 322 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 381
Query: 293 FGSEFQNY 300
+ S +
Sbjct: 382 YNSLIDGF 389
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 141/279 (50%), Gaps = 17/279 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +++LI + K ++ A+ EMI RG+ P+ +TYN L++G C+ LH
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH---- 367
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++FD M +G EPD+ ++SI+++ Y +A + + + KG+ P
Sbjct: 368 ------EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V C G++ A+EL EMV GV PS TY + N A++++ +M
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + + I YNI+I +++D ++ + + D+ +Y ++I GLC+K
Sbjct: 482 QKSRMTL-GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYR------GLIQS 273
EA F +M E G P T+ L R GLI S
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 141/291 (48%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V Y+SLI G C + D + L EMI R + P+VVT++ L++ +
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK---------- 327
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A+++++EM RGI PD +++ ++ + + + + + M KG P + T
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ C R++D L E+ G+ P+ TYN + N A +L+++M
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P++ TY IL+ ++ EI+ ++ S + L + Y ++IHG+C K
Sbjct: 448 SRGV-PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A F + +KG+ P VT+ + GL + L L +K+ E+ T
Sbjct: 507 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 557
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 141/299 (47%), Gaps = 16/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +++L+ G+C R+ A + M+E P++VT + L+NG+C +
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR------- 190
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + D M G +PD ++ VL+ ++ L+LD M+E+ I +V
Sbjct: 191 ---VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ V+ LC G +DA L EM G+ TY+ + K+ R+M
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ +P++ T++ LI +F+ ++ +E++N + + D +Y LI G C++
Sbjct: 308 GRNI-IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK-LDEESITFGS 295
EA Q F M+ KG P VT+ L ++ D +R +R + K L +IT+ +
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 145/323 (44%), Gaps = 26/323 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-SLHPNER 60
P++ ++LI G C R+ A + M+E G +P+ VTY +LN +C+ S +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 61 FEK------------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F K + +A +F+EM ++GI+ DV ++S ++
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K L M + I P V T+++++ G++ +A+EL EM+ G++P T
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + A +++ M C P+I TY+ILI + R+D ++ +
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKG-CEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
L + +Y L+ G C+ K A + F EM+ +G+ P VT+ L GL + L
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Query: 277 RTWRRLKKKLDEESITFGSEFQN 299
+ +K+ + +T G N
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYN 494
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 119/252 (47%), Gaps = 15/252 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y+ LI +CK R+D R E+ +G+ PN +TYN L+ G C+ L+
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA---- 438
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+++F EM RG+ P V ++ I+L + +L+ M++ + +
Sbjct: 439 ------AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ +C+ +++DA L + GV P TYN + + A L+R+MK
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
ED C P+ TYNILI + + + E+ +K D + M+I L +++
Sbjct: 553 EDG-CTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLD 611
Query: 242 KEACQYFVEMIE 253
K F++M+
Sbjct: 612 KS----FLDMLS 619
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y +L+ G+C+ +++ A+ EM+ RGV P+VVTY +LL+G+C L+
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN---- 472
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++F++M+ + + ++I++H A K + + +KG+ P V
Sbjct: 473 ------KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC G + +A+ L +M +G +P TYN + + G +++L +M
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Query: 181 K 181
K
Sbjct: 587 K 587
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 136/308 (44%), Gaps = 22/308 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + L + + D+ F M G+E ++ T +++N CR+
Sbjct: 67 LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRK-------- 118
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY---SRAHKPQLSLDKLNFMKEKGICP 117
K + A V G EPD +FS +++ + R + +D++ MK++ P
Sbjct: 119 --KKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR---P 173
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ T ++++ LC GR+ +A L+ MV G P TY ++ A+ L+
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
R+M+E ++ ++ Y+I+I D ++N ++ + D+ +Y+ LI GLC
Sbjct: 234 RKMEERNI-KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESIT 292
KW + + EMI + ++P VTF L ++ L + L + + ++IT
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 293 FGSEFQNY 300
+ S +
Sbjct: 353 YNSLIDGF 360
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 140/272 (51%), Gaps = 11/272 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN+ ++ LI +CK + A L M E GVEPNVVTY+ L+NG +A
Sbjct: 329 MPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAE------ 382
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K+FD M +G +PDV S++I+++ Y +A + + N M +G+ P +
Sbjct: 383 ----VVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIV 438
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y +++ LC GR+ +A +L M+ NG P TY+ + + A +L+R M
Sbjct: 439 SYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM 498
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L PN+ YNILI + R++++ + L ++ YT +I+GLC++
Sbjct: 499 QSTYL-KPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGL 557
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA + F M E G P + ++ + RG +Q
Sbjct: 558 LDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQ 589
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ +LI G CK+ + A +M+ RG +P+V TY ++NG+C+ +T+
Sbjct: 195 FNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCK---------IGETVA 245
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +F +M G +PDV ++S ++ + + +LD ++MK KGI P + TY S++
Sbjct: 246 -AAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLI 304
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKDANGAMKLYRQMKE 182
+ LC+ R +A +L EM+ + P+ T+ N F KE +A G +K +M
Sbjct: 305 QGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKE-GNVFEARGVLKTMTEMGV 363
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ PN+ TY+ L+ + + R++++ + D+ SY +LI+G C+ ++
Sbjct: 364 E----PNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIG 419
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EA Q F EMI +GL P V++ TL GL Q LR L K +
Sbjct: 420 EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 463
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 11/289 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y SLI G C +R A L EM+ + PN+VT+++L+N C+
Sbjct: 295 PNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCK---------- 344
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A V M G+EP+V ++S +++ YS + + + M KG P V +
Sbjct: 345 EGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFS 404
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C RI +A++L EM+ G++P +YN A L++ M
Sbjct: 405 YNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNML 464
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +P++ TY+IL+ F + ++ ++ + L ++ Y +LI +C+ +
Sbjct: 465 TNG-NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNL 523
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
KEA + F E+ +GL P + T+ GL + +L + ++E+
Sbjct: 524 KEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 572
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 10/247 (4%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
ID A + M+ R P ++ +N LL+ + + H + I ++ +M + G
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYH-----DAVISLSK----QMELAG 152
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
+ PD + ++++ + + + L L + + G+ T+ T+ +++ LC G+ A
Sbjct: 153 LSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAV 212
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
EL +MV G P TY + A L+R+M E C P++ TY+ +I
Sbjct: 213 ELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAG-CQPDVVTYSTIIDS 271
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
R++ +I++++K + ++ +Y LI GLC +W+EA EM+ ++P
Sbjct: 272 LCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPN 331
Query: 260 KVTFETL 266
VTF L
Sbjct: 332 IVTFSLL 338
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 45/216 (20%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI G+CK RI A++ EMI +G+ P++V+YN L++G+C+ L
Sbjct: 400 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL------ 453
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-----------------SRAHKPQL-- 102
R A +F M G PD+ ++SI+L + S KP +
Sbjct: 454 ----REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVM 509
Query: 103 ------SLDKLNFMKE----------KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
++ K +KE +G+ P V YT+++ LC G +++A E M
Sbjct: 510 YNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 569
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+G P+ +YN + + KD + A++L +M+E
Sbjct: 570 EDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRE 605
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKE-YRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
I+DA M+ P +N + R + + L +QM+ L P+ +T
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLS-PDTYTL 160
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
++LI F L R+D+ + + L L + ++ LI+GLC+ K+ +A + F +M+
Sbjct: 161 HMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVA 220
Query: 254 KGLLPQKVTFETLYRGL 270
+G P T+ T+ GL
Sbjct: 221 RGYQPDVHTYTTIINGL 237
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 22/193 (11%)
Query: 103 SLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE-ELLGEMVRNGVSPSAETY---- 157
+L N M + P + + ++ + DA L +M G+SP T
Sbjct: 105 ALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLI 164
Query: 158 NCFFKEYR---GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
NCFF+ R G +KL Q+ I T+N LI + + E+++
Sbjct: 165 NCFFQLQRVDLGFSVLAKIIKLGLQL--------TIVTFNTLINGLCKVGKFGQAVELFD 216
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ D+ +YT +I+GLC+ + A F +M E G P VT+ T+ L +
Sbjct: 217 DMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKD- 275
Query: 275 MLRTWRRLKKKLD 287
RR+ + LD
Sbjct: 276 -----RRVNEALD 283
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 148/287 (51%), Gaps = 12/287 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ K Y+ LI GW + + A EMI+ G P+ VTY+++++ +C+
Sbjct: 156 VPDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGR------ 209
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++ EM +P +S+++H Y ++ + ++ M+ G+ VA
Sbjct: 210 ----VDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVA 265
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C ++++ +L +M GV+P++ T N GR + + A K++R+M
Sbjct: 266 AYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRM 325
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +C P++ +Y ++I MF +DM +IW ++K + + ++++LI+GLC+
Sbjct: 326 IK--VCEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGN 383
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+AC EMIEKG+ P TF L LI+ + L++K++
Sbjct: 384 ATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEGRKDVLKFLQEKMN 430
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 135/304 (44%), Gaps = 46/304 (15%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV+ + ++ + + +++ A M + ++PNV +N LL+ +C+
Sbjct: 89 NVEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAAFNGLLSALCK----------S 138
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K +R A+++FD M+ + + PD ++SI++ + RA + + M + G P TY
Sbjct: 139 KNVRKAQEIFDNMKDQFV-PDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTY 197
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ +V LC GR+++A E++ EM N PS+ Y+ Y A+ + +M+
Sbjct: 198 SIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMER 257
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIW---------------NHVKGSELGL---- 223
+ + + ++ YN LI F N+M V + N + S +G
Sbjct: 258 NGV-MADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETD 316
Query: 224 ---------------DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
D+DSYTM+I C +++ A + + M +K +P TF L
Sbjct: 317 EAFKIFRRMIKVCEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLIN 376
Query: 269 GLIQ 272
GL Q
Sbjct: 377 GLCQ 380
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 117/239 (48%), Gaps = 16/239 (6%)
Query: 65 IRNAEKVFD---EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
IR + V+D MR + I +V +F I++ Y+RA K + ++ N M++ + P VA
Sbjct: 69 IRQYQMVWDLVNAMRNKEI-LNVEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAA 127
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC + A+E+ M ++ P ++TY+ + + + A ++YR+M
Sbjct: 128 FNGLLSALCKSKNVRKAQEIFDNM-KDQFVPDSKTYSILIEGWGRAPNLPKAREIYREMI 186
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREI-----WNHVKGSELGLDLDSYTMLIHGLC 236
D C+P+ TY+I++ + R+D EI +N+ K S Y++L+H
Sbjct: 187 -DSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSF-----IYSVLVHTYG 240
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
+ + ++A F+EM G++ + L +++ ++ R+ K +D + + S
Sbjct: 241 VENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNS 299
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 138/263 (52%), Gaps = 19/263 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YT+L G CK +D A L EM +G+E N+ TYN L+NG+C+ +
Sbjct: 361 PNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGN------- 413
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A K+ +M V G PD +++ ++ Y ++ + + + L M ++ + PTV T
Sbjct: 414 ---IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVT 470
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C G +ED E+LL M+ G+ P+A TYN K+Y R + ++YR M
Sbjct: 471 FNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMC 530
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIW---NHVKGSELGLDLDSYTMLIHGLCE 237
+ VP+ +TYNILI G A N ++E W + G L + SY LI G +
Sbjct: 531 AKGV-VPDGNTYNILIKGHCKARN----MKEAWFLHRDMVGKGFNLTVSSYNALIKGFYK 585
Query: 238 KQKWKEACQYFVEMIEKGLLPQK 260
++K+ EA + F +M +GL+ +
Sbjct: 586 RKKFLEARELFEQMRREGLVADR 608
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 11/267 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YT+LI G+CK+ + A R EM +R + P+ +TY ++ G+C+
Sbjct: 256 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGR------- 308
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+K+F EM + +EPD +++ ++ Y + K + + N M + G+ P + T
Sbjct: 309 ---VMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT 365
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++ LC CG ++ A ELL EM R G+ + TYN + + A+KL + M+
Sbjct: 366 YTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 425
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P+ TY L+ + M E+ + EL + ++ +L++G C
Sbjct: 426 VAGF-HPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGML 484
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYR 268
++ + M+EKG++P T+ +L +
Sbjct: 485 EDGEKLLKWMLEKGIMPNATTYNSLIK 511
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 123/266 (46%), Gaps = 12/266 (4%)
Query: 25 RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84
+ + EM +G++PN TYN ++ +C+ + AE+V EM GI PD
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGK----------VAEAERVLREMISEGIAPDG 258
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++ ++ + + + + M+++ I P TYT+V+ LC GR+ +A++L E
Sbjct: 259 VIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHE 318
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
MV + P TY Y A L+ QM + L PNI TY L
Sbjct: 319 MVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL-TPNIVTYTALADGLCKCG 377
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+D E+ + + L L++ +Y L++GLC+ +A + +M G P VT+
Sbjct: 378 EVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYT 437
Query: 265 TLYRGLIQS-DMLRTWRRLKKKLDEE 289
TL +S +M+R L++ LD E
Sbjct: 438 TLMDAYCKSREMVRAHELLRQMLDRE 463
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 8/232 (3%)
Query: 58 NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR-------AHKPQLSLDKLNFM 110
N + + A K+FD+M G+ V S ++ + S A K + L + M
Sbjct: 155 NPNLDVGVSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEM 214
Query: 111 KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
+ KG+ P TY V+ LC G++ +AE +L EM+ G++P Y + +
Sbjct: 215 QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNV 274
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
+ A +L+ +M++ + P+ TY +I R+ ++++ + L D +YT
Sbjct: 275 SSAYRLFDEMQKRKIS-PDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 333
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
LI G C++ K KEA +M++ GL P VT+ L GL + + T L
Sbjct: 334 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANEL 385
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 25/184 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+L+ +CK + A L +M++R ++P VVT+NVL+NG C L E+
Sbjct: 431 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 490
Query: 62 EK-------------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
K +R +++ M +G+ PD +++I++ + +
Sbjct: 491 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK 550
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + M KG TV++Y +++K + +A EL +M R G+ E
Sbjct: 551 ARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREI 610
Query: 157 YNCF 160
YN F
Sbjct: 611 YNIF 614
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN Y SLI +C N + M +GV P+ TYN+L+ G C+
Sbjct: 500 MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK--------- 550
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ ++ A + +M +G V+S++ ++ + + K + + M+ +G+
Sbjct: 551 -ARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADRE 609
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
Y G++E EL E + + +T N
Sbjct: 610 IYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 647
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 141/279 (50%), Gaps = 14/279 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT+L++ WC+ R+D AER EM + GV PNV TY +++ + R
Sbjct: 248 PDVVLYTTLVHAWCRSGRLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQ------- 300
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++ +M G P+ +F+ ++ + +A + + L N M++ G P + T
Sbjct: 301 ---VPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIIT 357
Query: 122 YTSVVKCLCSCGR--IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++ C G+ ++ A ++L M+ G P T+N K + N A KLY +
Sbjct: 358 YNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYER 417
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+E C PN+ TYN+L+ +F MDMV I + + ++++Y LI C +
Sbjct: 418 MQELQ-CKPNVVTYNLLMRLFNLEKSMDMVLRIKRDMDAQGVEPNVNTYAALIEAFCGRG 476
Query: 240 KWKEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLR 277
WK A EM+ EK L P K ++ + L ++ LR
Sbjct: 477 NWKRAHMTLREMVEEKALKPTKPVYDMVLALLRKAGQLR 515
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 25/291 (8%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--RASLHPNERFEK 63
+Y ++I K + +A L EM ER V ++ ++L + R RA + P+E
Sbjct: 147 LYAAMIDLLAKHHHFPLARHLLDEMRERSVP---ISAQLILALIRRYVRAEM-PSE---- 198
Query: 64 TIRNAEKVFDEMRVRGI-EPDVTSFSIVLHVYSR---AHKPQLSLDKLNFMKEKGICPTV 119
A +F M G PD + + +L S+ A + Q D + P V
Sbjct: 199 ----ASDLFRRMEEYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYKSV----FTPDV 250
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
YT++V C GR+++AE + EM + GV+P+ TY A +L Q
Sbjct: 251 VLYTTLVHAWCRSGRLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQ 310
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK- 238
M D C PN T+N ++ + R + V ++ N ++ D+ +Y L+ C K
Sbjct: 311 MI-DSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKG 369
Query: 239 -QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
A + MI KG +P TF + + ++ + R+L +++ E
Sbjct: 370 QSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQE 420
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 5/154 (3%)
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
A Y +++ L A LL EM V SA+ + Y + + A L+R+
Sbjct: 146 ALYAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRR 205
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+E P+ T L+G + +++ K S D+ YT L+H C
Sbjct: 206 MEEYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYK-SVFTPDVVLYTTLVHAWCRSG 264
Query: 240 KWKEACQYFVEMIEKGLLPQKVTF----ETLYRG 269
+ EA + F EM + G+ P T+ + +YR
Sbjct: 265 RLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRA 298
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + ++ + ++ A + M E +PNVVTYN+L+
Sbjct: 389 IPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLF----------N 438
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY------SRAHKPQLSLDKLNFMKEKG 114
EK++ ++ +M +G+EP+V +++ ++ + RAH ++L ++ ++EK
Sbjct: 439 LEKSMDMVLRIKRDMDAQGVEPNVNTYAALIEAFCGRGNWKRAH---MTLREM--VEEKA 493
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+ PT Y V+ L G++ EEL+ MV G
Sbjct: 494 LKPTKPVYDMVLALLRKAGQLRRHEELVEMMVDRG 528
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 139/272 (51%), Gaps = 17/272 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+ L+ G CK+ ++D A L M+ERG +PN+VT+N +++G C+
Sbjct: 370 PDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGK------- 422
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ KV + M+ PDV ++S ++ Y +A++ Q + L GI P A+
Sbjct: 423 ---VDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKAS 473
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S+++ LCS G++E+A+E++ M + G P++ Y + + A+K+ + M
Sbjct: 474 YSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMS 533
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C PN++TY+ILI R++ + + + D+ +YT LI G C+ K
Sbjct: 534 ERG-CEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKM 592
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
A Q F M + G P K+ + L G QS
Sbjct: 593 DAAYQCFKTMRDSGCEPDKLAYNILISGFCQS 624
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 133/281 (47%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +Y LI G CK+ +ID A L M+ER P+V+TY L+ G C+ +L
Sbjct: 125 PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALD----- 179
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+ ++M+ G+ PD +++ +L+ + ++ + L M E G P +
Sbjct: 180 -----EARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFS 234
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +VV CLC G+ E+A ++L +M+ P TYN + + A +L M
Sbjct: 235 YNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMV 294
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P + TY LIG F +R+ + + + + DL +Y L+ GLC+ K
Sbjct: 295 -GRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKL 353
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+EA + M+EK P VT+ L GL + + R L
Sbjct: 354 EEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLL 394
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 143/292 (48%), Gaps = 11/292 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YTSLI G C+ N +D A + + +M E G+ P+ V YN LLNG+C++ L
Sbjct: 159 VPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLE---- 214
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K+ +EM G EPD S++ V+ + K + + L M EK P V
Sbjct: 215 ------EVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVV 268
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S++ C ++++AE LL +MV +P+ TY + A ++ M
Sbjct: 269 TYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDM 328
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P++ TYN L+ +++ E+ + + D+ +Y++L++GLC+ K
Sbjct: 329 FKAGI-SPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGK 387
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A M+E+G P VTF T+ G ++ + ++ + + E S T
Sbjct: 388 VDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCT 439
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 17/269 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y SL+ G+CK++++D AER L +M+ R P V+TY L+ G R L
Sbjct: 265 PDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLA----- 319
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A +V ++M GI PD+ +++ +L +A K + + + L M EK P V T
Sbjct: 320 -----DAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVT 374
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ +V LC G+++DA LL M+ G P+ T+N + + K+ MK
Sbjct: 375 YSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMK 434
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P++ TY+ LI + NRM I + D SY+ ++ GLC K
Sbjct: 435 EVS-CTPDVVTYSTLIDGYCKANRMQDAFAILG------ISPDKASYSSMLEGLCSTGKV 487
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+EA + M ++G P + + GL
Sbjct: 488 EEAQEVMDLMTKQGCPPTSSHYALIIGGL 516
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 121/266 (45%), Gaps = 17/266 (6%)
Query: 26 FLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVT 85
F E +P+ TY L+ G R N + I N EM R PDV
Sbjct: 11 FFRERFSDPSKPSNSTYGALITGFSRAG----NSKMVLEIAN------EMLARRFSPDVI 60
Query: 86 SFSIVLHVYSRAHKPQLSLDK-LNFMKEKGIC-PTVATYTSVVKCLCSCGRIEDAEELLG 143
+ + +L Y + LD+ L+ + K C PT TY ++ LC C RI++A +LL
Sbjct: 61 THNTILKAYCQIG----DLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLD 116
Query: 144 EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL 203
EM++ P A YNC + A + + M E CVP++ TY LI
Sbjct: 117 EMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS-CVPDVITYTSLIVGCCQT 175
Query: 204 NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
N +D R++ +K S L D +Y L++GLC++ + +E + EM+E G P ++
Sbjct: 176 NALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSY 235
Query: 264 ETLYRGLIQSDMLRTWRRLKKKLDEE 289
T+ L +S ++ +K+ E+
Sbjct: 236 NTVVACLCESGKYEEAGKILEKMIEK 261
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 132/314 (42%), Gaps = 24/314 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-----RASLH 56
P+ Y +LI G+ + M EM+ R P+V+T+N +L C+ RA H
Sbjct: 22 PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81
Query: 57 PNERF------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
+ + I A ++ DEM + PD ++ ++ +
Sbjct: 82 FRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMG 141
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
K + + L M E+ P V TYTS++ C +++A +L+ +M +G++P YN
Sbjct: 142 KIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYN 201
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
+ KL +M E P+ +YN ++ + + +I +
Sbjct: 202 ALLNGLCKQNQLEEVSKLLEEMVEAGR-EPDTFSYNTVVACLCESGKYEEAGKILEKMIE 260
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
+ G D+ +Y L+ G C+ K EA + +M+ + P +T+ TL G ++D L
Sbjct: 261 KKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLAD 320
Query: 279 WRRLKKKLDEESIT 292
R+ + + + I+
Sbjct: 321 AYRVMEDMFKAGIS 334
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 95/192 (49%), Gaps = 11/192 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y+S++ G C +++ A+ + M ++G P Y +++ G+C ER
Sbjct: 469 PDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDV------ERG 522
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + K+ M RG EP++ ++SI+++ + + + +++ L+ M EKG P VAT
Sbjct: 523 DEAL----KMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVAT 578
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ C +++ A + M +G P YN + + A+++ + M
Sbjct: 579 YTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLML 638
Query: 182 EDDLCVPNIHTY 193
E C P+ TY
Sbjct: 639 EKG-CNPDAATY 649
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YTSLI G+CKIN++D A + M + G EP+ + YN+L++G C+ ++
Sbjct: 573 VPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNV----- 627
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSF 87
EK I +V M +G PD ++
Sbjct: 628 -EKAI----EVMQLMLEKGCNPDAATY 649
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 146/271 (53%), Gaps = 12/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K Y+ L+ GW + + EM++ G EP++VTY ++++ +C+ R
Sbjct: 202 PDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTG------RV 255
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ +R V +M RG +P +S+++H Y + + ++ M++ GI P +
Sbjct: 256 EEAVR----VVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVV 311
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V C + E+A +L +M +G++ ++ T+N + A K++R+M
Sbjct: 312 YNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRDDEAYKVFRRMI 371
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P+ TY ++I MF ++++M ++W +++ + + ++++LI+GLC+K++
Sbjct: 372 K--CCQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKREV 429
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+AC +MIEKG+ P TF L + L++
Sbjct: 430 SQACVLLEDMIEKGIRPPGSTFGKLRQLLLK 460
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 127/302 (42%), Gaps = 46/302 (15%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV+ + ++ + + ++D A M + GV PN+ +N LL +C+
Sbjct: 134 NVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCK----------S 183
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K +R A+++FD+M R PD ++SI+L + RA + + M + G P + TY
Sbjct: 184 KNVRKAQEIFDKMNSR-FSPDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTY 242
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+V LC GR+E+A ++ +M G P+ Y+ Y A+ + M++
Sbjct: 243 GIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEK 302
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL------------------- 223
D + VP+I YN L+ F + + + N ++G +
Sbjct: 303 DGI-VPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRDD 361
Query: 224 ---------------DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
D D+YTM+I CE K + A + + M K LP TF L
Sbjct: 362 EAYKVFRRMIKCCQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLPSMHTFSVLIN 421
Query: 269 GL 270
GL
Sbjct: 422 GL 423
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 100/217 (46%), Gaps = 2/217 (0%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
+V +F I++ Y+RA K ++ N M++ G+ P +A + S++ LC + A+E+
Sbjct: 134 NVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIF 193
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
+M + SP A+TY+ + + + ++Y +M D C P+I TY I++
Sbjct: 194 DKM-NSRFSPDAKTYSILLEGWGRAPNLPKMREVYSEML-DAGCEPDIVTYGIMVDSLCK 251
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
R++ + + Y++L+H + + ++A F++M + G++P V
Sbjct: 252 TGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVV 311
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ L ++ R+ ++ IT S N
Sbjct: 312 YNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWN 348
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 89/173 (51%), Gaps = 17/173 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ +Y +L+ +CK + + A R L +M G+ N T+N++LN + SL ++
Sbjct: 306 VPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHLI---SLGRDD- 361
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVF M ++ +PD ++++++ ++ K +++L +M+ K P++
Sbjct: 362 ------EAYKVFRRM-IKCCQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLPSMH 414
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKD 169
T++ ++ LC + A LL +M+ G+ P T+ KE GRKD
Sbjct: 415 TFSVLINGLCDKREVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKE--GRKD 465
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 138/262 (52%), Gaps = 19/262 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+L G CK +D A L EM +G++ N+ TYN ++NG+C+ +
Sbjct: 318 PNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGN------- 370
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A K+ +EM+ G+ PD +++ ++ Y + + + + L M ++G+ PTV T
Sbjct: 371 ---ILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVT 427
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G++ED E LL M+ G+ P+A TYN K+Y R + + ++YR M
Sbjct: 428 FNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMC 487
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIW---NHVKGSELGLDLDSYTMLIHGLCE 237
+ VP+ +TYNILI G A N ++E W + L SY LI G +
Sbjct: 488 AQGV-VPDSNTYNILIKGHCKARN----MKEAWFLHKEMVEKRFNLTASSYNALIKGFFK 542
Query: 238 KQKWKEACQYFVEMIEKGLLPQ 259
++K EA Q F EM +GL+
Sbjct: 543 RKKLLEARQLFEEMRREGLVAS 564
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 138/292 (47%), Gaps = 26/292 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y+S+I CK ++ E+ L EM++RGV P+ V Y L++G C+ + +
Sbjct: 178 PNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKL 237
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ A+K+F+EM +G EPD +++ ++ Y +
Sbjct: 238 FSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCK 297
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + N M + G+ P V TYT++ LC G ++ A ELL EM R G+ + T
Sbjct: 298 LGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNIST 357
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + A+KL +MKE L P+ TY L+ + M RE+ +
Sbjct: 358 YNTIVNGLCKAGNILQAVKLMEEMKEAGL-HPDTITYTTLMDAYYKTGEMVKARELLREM 416
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
L + ++ +L++GLC K ++ + M+EKG++P T+ ++ +
Sbjct: 417 LDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMK 468
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 144/298 (48%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+LI G+CK+ + A +M++ G+ PNVVTY L +G+C+ L
Sbjct: 283 PDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELD----- 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ EM +G++ ++++++ +++ +A ++ + MKE G+ P T
Sbjct: 338 -----TANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTIT 392
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ G + A ELL EM+ G+ P+ T+N +L + M
Sbjct: 393 YTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWML 452
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + +PN TYN ++ + N M + EI+ + + D ++Y +LI G C+ +
Sbjct: 453 EKGI-MPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNM 511
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
KEA EM+EK ++ L +G + L R+L +++ E + +E N
Sbjct: 512 KEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYN 569
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 139/288 (48%), Gaps = 12/288 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT++I G+C + + + + EM +G++PN+ TY+ ++ +C+
Sbjct: 142 IPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGK------ 195
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ EKV EM RG+ PD ++ ++ + + Q + + M+ + I P
Sbjct: 196 ----VVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSI 251
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+++++ L G++ +A++L EM++ G P TY Y + A L+ QM
Sbjct: 252 AFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQM 311
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L PN+ TY L +D E+ + + L L++ +Y +++GLC+
Sbjct: 312 VQIGL-TPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGN 370
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRLKKKLD 287
+A + EM E GL P +T+ TL ++ +M++ L++ LD
Sbjct: 371 ILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLD 418
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 126/267 (47%), Gaps = 11/267 (4%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75
K + + M + E + GV N +YN+L+N + R IR A + M
Sbjct: 87 KRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGK----------IREAHHLLMRM 136
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
+G PDV S++ ++ Y + Q + + M+ KG+ P + TY+S++ LC G++
Sbjct: 137 EFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKV 196
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
+ E++L EM++ GV P Y + + A KL+ +M+ ++ VP+ ++
Sbjct: 197 VEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREI-VPDSIAFSA 255
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
LI ++ +++N + D +YT LI G C+ + K+A +M++ G
Sbjct: 256 LICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIG 315
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRL 282
L P VT+ L GL +S L T L
Sbjct: 316 LTPNVVTYTALADGLCKSGELDTANEL 342
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 29/186 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+L+ + K + A L EM++RG++P VVT+NVL+NG+C L ER
Sbjct: 388 PDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERL 447
Query: 62 EK---------------------TIRN----AEKVFDEMRVRGIEPDVTSFSIVL--HVY 94
K IRN + +++ M +G+ PD +++I++ H
Sbjct: 448 LKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCK 507
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+R K L K M EK T ++Y +++K ++ +A +L EM R G+ SA
Sbjct: 508 ARNMKEAWFLHKE--MVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASA 565
Query: 155 ETYNCF 160
E YN F
Sbjct: 566 EIYNLF 571
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLH-VYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+ A K FD++ G+ S ++ L + S+ + L + + G+C +Y
Sbjct: 55 LNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYN 114
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ L G+I +A LL M E++G
Sbjct: 115 ILMNSLFRLGKIREAHHLLMRM-----------------EFKG----------------- 140
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
C+P++ +Y +I + + + V ++ ++ L +L +Y+ +I LC+ K E
Sbjct: 141 --CIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVE 198
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ EM+++G+ P V + TL G + + +L +++ I
Sbjct: 199 GEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIV 247
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 151/315 (47%), Gaps = 27/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +I G+C R A+R L EM+ER + PNVVTY+ L+N +
Sbjct: 282 PDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVK---------- 331
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ AE+++DEM RGI P+ +++ ++ + + ++ + M KG P V T
Sbjct: 332 ERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFT 391
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C RI+D ELL EM G+ TYN + D N A+ L +QM
Sbjct: 392 FNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMI 451
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-----------DLDSYTM 230
+C P+I T N L+ ++ E++ ++ S++ L D+ +Y +
Sbjct: 452 SSGVC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNI 510
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKK 285
LI GL + K+ EA + + EM +G++P +T+ ++ GL + L ++ K
Sbjct: 511 LISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKS 570
Query: 286 LDEESITFGSEFQNY 300
+ +TF + Y
Sbjct: 571 FSPDVVTFNTLVSGY 585
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 22/281 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y S+I G+CK NR+D AE M +G P+V T+N L++G C
Sbjct: 351 IPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCG--------- 401
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K I + ++ EM G+ D T+++ ++H + +LD M G+CP +
Sbjct: 402 -AKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV 460
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVR-----------NGVSPSAETYNCFFKEYRGRKD 169
T +++ LC G+++DA E+ M + NGV P +TYN
Sbjct: 461 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGK 520
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A +LY++M + VPN TY+ +I +R+D ++++ + D+ ++
Sbjct: 521 FLEAEELYKEMPHRGI-VPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFN 579
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
L+ G C+ + + + F EM +G++ +T+ TL G
Sbjct: 580 TLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGF 620
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 131/269 (48%), Gaps = 10/269 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+L+ G C+ R+ A L M+E G++PN +TY +++G+C+
Sbjct: 176 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGD------- 228
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ N + +EM I+P+V +S ++ + + + + M+EKGI P + T
Sbjct: 229 TVSALNLLRKMEEMS--HIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFT 286
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ CS GR +A+ LL EM+ ++P+ TY+ Y + A +LY +M
Sbjct: 287 YNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEML 346
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PN TYN +I F NR+D ++ + D+ ++ LI G C ++
Sbjct: 347 PRGI-IPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRI 405
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + EM E GL+ T+ TL G
Sbjct: 406 DDGTELLHEMTETGLVADTTTYNTLIHGF 434
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 14/272 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + L+ ++ R D+ +M + + +V ++N+L+ C + L
Sbjct: 74 LPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLP---- 129
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A F ++ G +PDV +FS +LH + +LD + M P V
Sbjct: 130 ------FALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR----PNVV 179
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T+++ LC GR+ +A LL MV +G+ P+ TY D A+ L R+M
Sbjct: 180 TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKM 239
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+E PN+ Y+ +I R ++ ++ + DL +Y +I G C +
Sbjct: 240 EEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGR 299
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
W EA + EM+E+ + P VT+ L ++
Sbjct: 300 WSEAQRLLQEMLERKINPNVVTYSALINAYVK 331
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 36/216 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+ + Y +LI+G+C + ++ A +MI GV P++VT N LL+G+C L
Sbjct: 421 VADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 480
Query: 56 ---------------HPNERFEKTIRN----------------AEKVFDEMRVRGIEPDV 84
P E ++ AE+++ EM RGI P+
Sbjct: 481 MFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNT 540
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++S +++ + + + + M K P V T+ ++V C GR++D EL E
Sbjct: 541 ITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCE 600
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
M R G+ A TY +R + NGA+ ++++M
Sbjct: 601 MGRRGIVADAITYITLIHGFRKVGNINGALDIFQEM 636
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ Y LI G + AE EM RG+ PN +TY+ ++NG+C+++ L
Sbjct: 503 PDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLD----- 557
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++FD M + PDV +F+ ++ Y +A + L+ M +GI T
Sbjct: 558 -----EATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAIT 612
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
Y +++ G I A ++ EM+ +GV P T
Sbjct: 613 YITLIHGFRKVGNINGALDIFQEMISSGVYPDTIT 647
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 96/242 (39%), Gaps = 50/242 (20%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + +A +F +M P V F+ ++ V R +P L + M+ K I V ++
Sbjct: 56 KGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSF 115
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++KC CSC ++ A G++ + G P T++ + A+ L+ QM
Sbjct: 116 NILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM-- 173
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C PN+ T +T L++GLC + +
Sbjct: 174 ---CRPNVVT-----------------------------------FTTLMNGLCREGRVV 195
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
EA M+E GL P ++T+ T+ G+ + + L +K++E S H
Sbjct: 196 EAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMS----------HI 245
Query: 303 KP 304
KP
Sbjct: 246 KP 247
>gi|255551140|ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544438|gb|EEF45959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 577
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 144/282 (51%), Gaps = 11/282 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V++Y ++ GW + ++ AER EM + V P+VVTY L+ G CR R
Sbjct: 227 IPHVRIYNIMLNGWFRSRKLKHAERLWLEMKKNNVSPSVVTYGTLVEGYCRM------RR 280
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ I ++ D MR GIEP+ ++ ++ + + + + + + PT++
Sbjct: 281 VERAI----ELVDVMRKEGIEPNALVYNPIIDALAEEGRFKEVSGMMEYFLQSESGPTIS 336
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S+VK C A ++L M+ G P+ TYN FF+ + M LY +M
Sbjct: 337 TYNSLVKGYCKAKDPVGASKVLKMMISRGFVPTPTTYNYFFRHFSKFGMIEEGMNLYTKM 396
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E P+ T+++L+ M R+D+ +I ++ +DL + TMLIH C +
Sbjct: 397 IESGY-TPDRLTFHLLLKMLCEEERLDLAVQISKEMRSRGCDMDLATSTMLIHLFCRMHR 455
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++EA F +MI+KG++PQ +TF+ L L + M+ R+L
Sbjct: 456 FEEAFMEFEDMIQKGIVPQYLTFQRLNDELRKRGMVERARKL 497
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 123/279 (44%), Gaps = 48/279 (17%)
Query: 10 LIYGWCKINRIDMAERFLG--EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRN 67
L+ CK + +A+ + + ++ P+V YN++LNG R + +++
Sbjct: 199 LLDSLCKEGHVRVAKEYFDSRKQLDSCWIPHVRIYNIMLNGWFR----------SRKLKH 248
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
AE+++ EM+ + P V ++ ++ Y R + + +++ ++ M+++GI P Y ++
Sbjct: 249 AERLWLEMKKNNVSPSVVTYGTLVEGYCRMRRVERAIELVDVMRKEGIEPNALVYNPIID 308
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
L GR ++ ++ +++ P+ TYN K Y KD GA K+ + M V
Sbjct: 309 ALAEEGRFKEVSGMMEYFLQSESGPTISTYNSLVKGYCKAKDPVGASKVLKMMISRGF-V 367
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
P TYN F ++ M+ E G++L
Sbjct: 368 PTPTTYNYF---FRHFSKFGMIEE----------GMNL---------------------- 392
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ +MIE G P ++TF L + L + + L ++ K++
Sbjct: 393 YTKMIESGYTPDRLTFHLLLKMLCEEERLDLAVQISKEM 431
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 1/176 (0%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P V Y ++ +++ AE L EM +N VSPS TY + Y + A++L
Sbjct: 228 PHVRIYNIMLNGWFRSRKLKHAERLWLEMKKNNVSPSVVTYGTLVEGYCRMRRVERAIEL 287
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
M+++ + PN YN +I R V + + SE G + +Y L+ G C
Sbjct: 288 VDVMRKEGI-EPNALVYNPIIDALAEEGRFKEVSGMMEYFLQSESGPTISTYNSLVKGYC 346
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ + A + MI +G +P T+ +R + M+ L K+ E T
Sbjct: 347 KAKDPVGASKVLKMMISRGFVPTPTTYNYFFRHFSKFGMIEEGMNLYTKMIESGYT 402
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 146/290 (50%), Gaps = 14/290 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDM---AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
NV Y +LI G+CK+ +I A+ L EM G+ PN VT+N+L++G C+
Sbjct: 196 ANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCK------- 248
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+K + A KVF EM +G++P+V +++ +++ K + + M + P
Sbjct: 249 ---DKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPN 305
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ T+ +++ C ++ A EL +M + G++P+ TYN Y ++ A LYR
Sbjct: 306 IITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYR 365
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M +C P++ TYN LI ++ R + + + L DL +Y +LI LC K
Sbjct: 366 IMLGKGVC-PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNK 424
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ K+A + EM KGL P ++T+ T+ G + LR L+ ++++
Sbjct: 425 GEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEK 474
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI G C +++ A +M+ ++PN++T+N LLNG C+
Sbjct: 269 PNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCK---------- 318
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K ++ A ++FD+M +GI P+VT+++I++ Y + + + M KG+CP V+T
Sbjct: 319 NKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVST 378
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G +E A L+ EM + TYN + + A++L +M
Sbjct: 379 YNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMC 438
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+ TYN +I + + + + ++ ++ +Y +LI G C+K K
Sbjct: 439 RKGL-KPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKL 497
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
++A EM+EKGL+P ++T+E +
Sbjct: 498 EDANGLLNEMLEKGLIPNRMTYEIV 522
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 128/260 (49%), Gaps = 14/260 (5%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
L++ + K R + + G++ +V + N L++G+ + I + E
Sbjct: 99 LVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGE----------IGDME 148
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
V+ EM R IEP + SF+IV++ + K + D + MK +G+ V TY +++
Sbjct: 149 FVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGY 208
Query: 130 CSCGRIE---DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G+I A+ +L EM +G+ P+ T+N + K+ + AMK++ +M +
Sbjct: 209 CKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGV- 267
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+ TYN LI +++ + + + S L ++ ++ L++G C+ + K+A +
Sbjct: 268 KPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGE 327
Query: 247 YFVEMIEKGLLPQKVTFETL 266
F +M ++G+ P T+ L
Sbjct: 328 LFDDMPKQGITPNVTTYNIL 347
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI C + A R L EM +G++P+ +TYN +++G C+ E +R
Sbjct: 414 YNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCK----------EGNLR 463
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + +M G +V ++++++ + + K + + LN M EKG+ P TY V
Sbjct: 464 AALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVT 523
Query: 127 KCLCSCGRIEDAE 139
+ + G + D E
Sbjct: 524 EEMMEKGFVPDIE 536
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVL 45
+ NV Y LI G+CK ++++ A L EM+E+G+ PN +TY ++
Sbjct: 478 LANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIV 522
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 142/288 (49%), Gaps = 17/288 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + +T+LI G CK A +M+ RG +P+V TY ++NG+C+
Sbjct: 159 PTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAA---- 214
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +M G +PDV ++S ++ + +LD ++MK KGI PTV +
Sbjct: 215 ------AAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVS 268
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF---FKEYRGRKDANGAMKLYR 178
YTS+++ LCS R ++A +L EM + P T++ F + +A G +K
Sbjct: 269 YTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMT 328
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M + PN+ TYN L+ + + R++++ + D+ SY++LI+G C
Sbjct: 329 EMGVE----PNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMV 384
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
++ EA Q F EMI +GL P V++ TL Q LR R L K +
Sbjct: 385 KRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDM 432
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 139/272 (51%), Gaps = 11/272 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP++ ++ LI +CK + A+ L M E GVEPNV+TYN L++G
Sbjct: 298 MPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGY----------S 347
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A K+FD M RG +PDV S+SI+++ Y + + N M +G+ P
Sbjct: 348 LQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTV 407
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+YT+++ C G++ +A EL +M NG P TY+ + + + A +L+R M
Sbjct: 408 SYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAM 467
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L PN+ Y ILI ++ R++++ + L D+ YT +I+GLC++
Sbjct: 468 QGTYL-KPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGL 526
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA + F +M E G P + ++ + RG +Q
Sbjct: 527 LDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQ 558
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 140/288 (48%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V YTSLI G C +R A L EM + P++VT+++L++ C+
Sbjct: 264 PTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCK---------- 313
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A+ V M G+EP+V +++ ++H YS + + + M +G P V +
Sbjct: 314 EGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFS 373
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ C RI++A++L EM+ G++P+ +Y + A +L++ M
Sbjct: 374 YSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMH 433
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +P++ TY++L+ F + ++ ++G+ L +L YT+LI +C+
Sbjct: 434 TNGY-LPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNL 492
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
A + F E+ GL P + T+ GL + +L +K++E+
Sbjct: 493 NHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEED 540
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 10/247 (4%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
ID A M+ R P ++ +N LL+ + R + ++ I ++ +M + G
Sbjct: 71 IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRM-----RQYYDAVISLSK----QMELAG 121
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
+ P+ + +I+++ + L L + + G+ PT+ T+T+++ LC G A
Sbjct: 122 LSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQAL 181
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
EL +MV G P TY + A L ++M E C P++ TY+ LI
Sbjct: 182 ELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVG-CQPDVVTYSTLIDS 240
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
++ +I++++K + + SYT LI GLC +WKEA EM ++P
Sbjct: 241 LCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPD 300
Query: 260 KVTFETL 266
VTF L
Sbjct: 301 IVTFSLL 307
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 45/216 (20%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+ LI G+C + RID A++ EMI +G+ PN V+Y L++ C+ L
Sbjct: 369 PDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKL------ 422
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH-----------------KPQLSL 104
R A ++F +M G PD+ ++S++L + + KP L +
Sbjct: 423 ----REARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVM 478
Query: 105 -----------DKLNFMKE-------KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
LN ++ G+ P V YT+++ LC G +++A E +M
Sbjct: 479 YTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKME 538
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+G P+ +YN + + KD + A++L +M++
Sbjct: 539 EDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRD 574
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 133/259 (51%), Gaps = 11/259 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YT+L G CK +D A L EM +G+E N+ TYN L+NG+C+ +
Sbjct: 461 PNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGN------- 513
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A K+ +M V G PD +++ ++ Y ++ + + + L M ++ + PTV T
Sbjct: 514 ---IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVT 570
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C G +ED E+LL M+ G+ P+A TYN K+Y R + ++YR M
Sbjct: 571 FNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMC 630
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ VP+ +TYNILI M + + G L + SY LI G +++K+
Sbjct: 631 AKGV-VPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKF 689
Query: 242 KEACQYFVEMIEKGLLPQK 260
EA + F +M +GL+ +
Sbjct: 690 LEARELFEQMRREGLVADR 708
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 11/267 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YT+LI G+CK+ + A R EM +R + P+ +TY ++ G+C+
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGR------- 408
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+K+F EM + +EPD +++ ++ Y + K + + N M + G+ P + T
Sbjct: 409 ---VMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT 465
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++ LC CG ++ A ELL EM R G+ + TYN + + A+KL + M+
Sbjct: 466 YTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 525
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P+ TY L+ + M E+ + EL + ++ +L++G C
Sbjct: 526 VAGF-HPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGML 584
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYR 268
++ + M+EKG++P T+ +L +
Sbjct: 585 EDGEKLLKWMLEKGIMPNATTYNSLIK 611
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 138/290 (47%), Gaps = 12/290 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+++I G+C++ + + + EM +G++PN TYN ++ +C+
Sbjct: 285 IPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGK------ 338
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ AE+V EM GI PD ++ ++ + + + + M+++ I P
Sbjct: 339 ----VAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFI 394
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+V+ LC GR+ +A++L EMV + P TY Y A L+ QM
Sbjct: 395 TYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQM 454
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L PNI TY L +D E+ + + L L++ +Y L++GLC+
Sbjct: 455 LQMGL-TPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGN 513
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRLKKKLDEE 289
+A + +M G P VT+ TL +S +M+R L++ LD E
Sbjct: 514 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 563
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 11/266 (4%)
Query: 17 INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR 76
++ I +A + E E GV N +YN++ + +C+ + A ++ +M
Sbjct: 231 LDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGR----------VVEAHQLLLQME 280
Query: 77 VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
+RG PDV S+S V++ Y + + Q L + M+ KG+ P TY V+ LC G++
Sbjct: 281 LRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVA 340
Query: 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
+AE +L EM+ G++P Y + + + A +L+ +M++ + P+ TY +
Sbjct: 341 EAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKIS-PDFITYTAV 399
Query: 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
I R+ ++++ + L D +YT LI G C++ K KEA +M++ GL
Sbjct: 400 ICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL 459
Query: 257 LPQKVTFETLYRGLIQSDMLRTWRRL 282
P VT+ L GL + + T L
Sbjct: 460 TPNIVTYTALADGLCKCGEVDTANEL 485
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 25/184 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+L+ +CK + A L +M++R ++P VVT+NVL+NG C L E+
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 590
Query: 62 EK-------------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
K +R +++ M +G+ PD +++I++ + +
Sbjct: 591 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK 650
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + M KG TV++Y +++K + +A EL +M R G+ E
Sbjct: 651 ARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREI 710
Query: 157 YNCF 160
YN F
Sbjct: 711 YNIF 714
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN Y SLI +C N + M +GV P+ TYN+L+ G C+
Sbjct: 600 MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK--------- 650
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ ++ A + +M +G V+S++ ++ + + K + + M+ +G+
Sbjct: 651 -ARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADRE 709
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
Y G++E EL E + + +T N
Sbjct: 710 IYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 747
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 148/322 (45%), Gaps = 46/322 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G C +D A L EM E G+EPNVV Y+ LL+G C+ R+
Sbjct: 127 PDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTG------RW 180
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + KVF+EM RGIEPDV ++ ++ R K + + ++ M E+G+ P V T
Sbjct: 181 E----SVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVT 236
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY---- 177
Y ++ +C G + +A +L M GV P TYN + + AM L
Sbjct: 237 YNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMM 296
Query: 178 --------------------------------RQMKEDDLCVPNIHTYNILIGMFMALNR 205
R M ++ C N+ +N+LIG + +++
Sbjct: 297 QGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHK 356
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ E+ + + S L D +Y++LI+G C+ ++ + A Y EM +G+ P+ V +
Sbjct: 357 VKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIP 416
Query: 266 LYRGLIQSDMLRTWRRLKKKLD 287
L + + M+ R L ++D
Sbjct: 417 LLKAMCDQGMMGQARDLFNEMD 438
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 148/344 (43%), Gaps = 54/344 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V MYT+LI C+ ++ A R + M ERG+EPNVVTYNVL+N +C+
Sbjct: 197 PDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCK---------- 246
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFM--KEKGICPTV 119
E ++R A + M +G++PDV +++ ++ S + ++ L M E + P +
Sbjct: 247 EGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDL 306
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+ SV+ LC G + A ++ M NG + +N AM+L +
Sbjct: 307 MTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDE 366
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNR---------------------------------- 205
M L P+ TY+ILI F + +
Sbjct: 367 MASSGL-QPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQG 425
Query: 206 -MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
M R+++N + LD +Y+ +IHG + + K A ++ +MI++GL+P VT+
Sbjct: 426 MMGQARDLFNEMD-RNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYS 484
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDEESI-----TFGSEFQNYHFK 303
+S L R+ K++ F S Q Y K
Sbjct: 485 IPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAK 528
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 122/272 (44%), Gaps = 12/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + S+I+G CKI + A + M E G N+V +N+L+ G+ R +H
Sbjct: 304 PDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLR---VH----- 355
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A ++ DEM G++PD ++SI+++ + + + + + L+ M+ +G+ P
Sbjct: 356 --KVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVH 413
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++K +C G + A +L EM RN A Y+ + A + + M
Sbjct: 414 YIPLLKAMCDQGMMGQARDLFNEMDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMI 472
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ L +P+ TY+I I MF + + + S D+ + LI G K
Sbjct: 473 DEGL-IPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDT 531
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ + EM K + T+ L S
Sbjct: 532 EKILELTREMTAKDVALDPKIISTIVTSLGAS 563
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 111/235 (47%), Gaps = 12/235 (5%)
Query: 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+ V+YN +L +CR+ L + + + ++ P+ S++ ++
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASR-------PNAISYTTLMRALCAD 107
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ ++ L M++ G+ P V TY ++++ LC ++ A ELL EM +G+ P+ Y
Sbjct: 108 RRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVY 167
Query: 158 NCFFKEY--RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+C Y GR ++ G K++ +M + P++ Y LI ++ + +
Sbjct: 168 SCLLHGYCKTGRWESVG--KVFEEMSGRGI-EPDVVMYTALIDSLCRHGKVKKAARVMDM 224
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ L ++ +Y +LI+ +C++ +EA M EKG+ P VT+ TL GL
Sbjct: 225 MTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGL 279
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 151/309 (48%), Gaps = 21/309 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNER 60
P++ Y+++I G+CK +D A L EM+ R G+ P+VVTY +++G+CR + +R
Sbjct: 75 PDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKM---DR 131
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL--NFMKEKGICPT 118
+ +R EM+++G+EPD +FS ++ + A K +L KL + P
Sbjct: 132 ACEMVR-------EMKLKGVEPDKFTFSALITGWCNARKVDEAL-KLYKEILTSSSWKPD 183
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V TYT+++ C G +E A ++LG M P+ TY+ D + A+ L+R
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 243
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M CVPN+ TY LI A +++D R + + + + D SY L+ G C
Sbjct: 244 RMTSKG-CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL------KKKLDEESIT 292
+ +EA Q F EM K LP ++T+ L RG + L R L +D + +T
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 362
Query: 293 FGSEFQNYH 301
+ Y
Sbjct: 363 YSIVVAGYS 371
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 148/293 (50%), Gaps = 16/293 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V +T +I G+CK N++ A +M E V PN TYNV++NG+C+
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCK---------- 53
Query: 62 EKTIRNAEKVFDEMR-VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-GICPTV 119
+ A +V EMR + + PD+ ++S V++ + + + + + L M + GI P V
Sbjct: 54 ARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDV 113
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYTSVV LC G+++ A E++ EM GV P T++ + + + A+KLY++
Sbjct: 114 VTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKE 173
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ P++ TY LI F ++ ++ ++G + ++ +Y+ L+HGLC+
Sbjct: 174 ILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 233
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A F M KG +P VT+ TL GL + + R L +DE + T
Sbjct: 234 DLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL---MDEMTAT 283
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 11/282 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT+LI G+CK ++ A + LG M R PNVVTY+ LL+G+C+ L
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD----- 236
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F M +G P+V +++ ++H AHK + ++ M P +
Sbjct: 237 -----QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVS 291
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C GRIE+A++L EM P TY C + + A L MK
Sbjct: 292 YNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMK 351
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P++ TY+I++ + R E + + + +Y+ LI GLC+ +
Sbjct: 352 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 411
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRTWRRL 282
A + M+ K + P TF ++ L + DM W+ L
Sbjct: 412 DHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLL 453
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 123/274 (44%), Gaps = 12/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y+SL++G CK +D A M +G PNVVTY L++G+C + H
Sbjct: 216 VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLC---AAHK--- 269
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A + DEM PD S++ +L Y R + + + M K P
Sbjct: 270 ----VDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRI 325
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEM-VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYT +V+ C+ R+E+A LL M G+ P TY+ Y K A + ++
Sbjct: 326 TYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQE 385
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M ++ PN TY+ LI R+D E+ ++ + + ++ +I LC
Sbjct: 386 MIARNV-APNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLG 444
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA + V M GL P VT+ TL G ++
Sbjct: 445 DMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRT 478
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 21/282 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV YT+LI+G C +++D A + EM P+ V+YN LL+G CR
Sbjct: 251 VPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGR------ 304
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK-EKGICPTV 119
I A+++F EM + PD +++ ++ + A + + + L MK GI P V
Sbjct: 305 ----IEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 360
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY+ VV R +A E + EM+ V+P+A TY+ + AM++ +
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKN 420
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + P++ T+N +IG L MD ++ + L + +YT L+ G
Sbjct: 421 MVNKRV-EPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 479
Query: 240 KWKEACQYFVEM--------IEKGLLPQKVTFETLYRGLIQS 273
+ + A + F M L+P++ F L RGL ++
Sbjct: 480 RMEIAYELFEVMRKKAKKSSSAANLVPEQ-AFSALIRGLCKA 520
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 52/191 (27%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+SLI G CK R+D A L M+ + VEP+V T+N ++ +CR +
Sbjct: 393 PNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMD----- 447
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE--------- 112
A K+ M G+EP + +++ +L +SR + +++ + M++
Sbjct: 448 -----EAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAA 502
Query: 113 ------------KGIC---------------------PTVATYTSVVKCLCSCGRIEDAE 139
+G+C P ++V L GR E+A
Sbjct: 503 NLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAG 562
Query: 140 ELLGEMVRNGV 150
+L+ + + G+
Sbjct: 563 KLINSISKVGL 573
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 141/272 (51%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+L++G + N+ A + M+ +G +P++VTY ++NG+C+R P+
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG--EPDL-- 223
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M IE DV +S V+ + +L+ M KGI P V T
Sbjct: 224 ------ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLC+ GR DA LL +M+ ++P+ T+N + A KL+ +M
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PNI TYN LI F +R+D ++I+ + + D+ +Y LI+G C+ +K
Sbjct: 338 QRSI-DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + F +M +GL+ VT+ TL G Q+
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 139/292 (47%), Gaps = 22/292 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+SLI C R A R L +M+ER + PNVVT+N L++ +
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK---------- 322
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK+FDEM R I+P++ +++ +++ + + + M K P V T
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C ++ D EL +M R G+ + TY + D + A +++QM
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + PNI TYN L+ +++ ++ +++ S++ D+ +Y ++ G+C+ K
Sbjct: 443 SDGVH-PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
++ F + KG+ P + + T+ G KK L EE+ T
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFC-----------KKGLKEEAYTL 542
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 139/273 (50%), Gaps = 21/273 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + SLI + K ++ AE+ EMI+R ++PN+VTYN L+NG C ++R
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM------HDRL 361
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A+++F M + PDV +++ +++ + +A K ++ M +G+ T
Sbjct: 362 DE----AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ ++A+ + +MV +GV P+ TYN AM ++ ++
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWN-----HVKGSELGLDLDSYTMLIHGLC 236
+ + P+I+TYNI M + + V + W+ +KG + D+ +Y +I G C
Sbjct: 478 KSKM-EPDIYTYNI---MSEGMCKAGKVEDGWDLFCSLSLKGVKP--DVIAYNTMISGFC 531
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+K +EA F++M E G LP T+ TL R
Sbjct: 532 KKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 135/304 (44%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++ L+ K+ + D+ F +M GV N+ TYN+++N +CRR+ L
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQL------ 116
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +M G P + + + +L+ + ++ ++ ++ M E G P T
Sbjct: 117 ----SFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVT 172
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T++V L + +A L+ MV G P TY R + + A+ L +M+
Sbjct: 173 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 232
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + ++ Y+ +I +D ++ + + D+ +Y+ LI LC +W
Sbjct: 233 KGKI-EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSE 296
+A + +M+E+ + P VTF +L + L +L ++ +D +T+ S
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 297 FQNY 300
+
Sbjct: 352 INGF 355
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 129/282 (45%), Gaps = 16/282 (5%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
++D A GEM++ P++V ++ LL+ + + ++F+ I EK M +
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM------KKFDLVISFGEK----MEIL 94
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G+ ++ +++I+++ R + +L L M + G P++ T S++ C RI +A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ +MV G P T+ A+ A+ L +M C P++ TY +I
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVIN 213
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
D+ + N ++ ++ D+ Y+ +I LC+ + +A F EM KG+ P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 259 QKVTFETLYRGLIQ----SDMLRTWRR-LKKKLDEESITFGS 295
T+ +L L SD R L++K++ +TF S
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N YT+LI+G+ + + D A+ +M+ GV PN++TYN LL+G+C+ N + E
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK------NGKLE 467
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K A VF+ ++ +EPD+ +++I+ +A K + D + KG+ P V Y
Sbjct: 468 K----AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C G E+A L +M +G P + TYN + + D + +L ++M+
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +LI G+CK ++ +M RG+ N VTY L++G + +
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD---- 432
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
NA+ VF +M G+ P++ +++ +L + K + ++ ++++ + P +
Sbjct: 433 ------NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY + + +C G++ED +L + GV P YN + + A L+ +M
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Query: 181 KEDDLCVPNIHTYNILI 197
KED +P+ TYN LI
Sbjct: 547 KEDG-PLPDSGTYNTLI 562
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 128/272 (47%), Gaps = 10/272 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y L++G C +++ A EM P+VVTYN LL+ VC+
Sbjct: 183 PNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCK---------- 232
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + K+F+ MR G P+V +FS ++H R + + +L+ M E G P T
Sbjct: 233 ARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYT 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC ++ A EL +M + + P A YN Y R + A KLYR+M
Sbjct: 293 YTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMS 352
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P I T+N LI F L ++ E+ + L D +Y +LI GL K
Sbjct: 353 GGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKL 412
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA + + +M EK L V+ + GL ++
Sbjct: 413 DEALEVYKQMREKKFLLDPVSCVSFVGGLCKT 444
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 141/290 (48%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + ++ G+ + N ++ A M+E G +P+ V+Y++L++G+ + L
Sbjct: 43 PDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLD----- 97
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ K+ EM +RG P + ++S ++ ++A + + + M G P
Sbjct: 98 -----ESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLM 152
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G+++DA E +M ++G P+ YN A L+ +MK
Sbjct: 153 FYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMK 212
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P++ TYN L+ R++ +++ ++ + ++ +++ LIHGLC +
Sbjct: 213 SHS-CSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGEL 271
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++A + F M+E G P K T+ TL GL +++ + R L +K+ + I
Sbjct: 272 EKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACI 321
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 11/274 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y+S+I K + + + + L EM+ G P+V +N ++ G R
Sbjct: 9 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFAR----------S 58
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A +V+ M G +PD S+ I++H ++ K SL L+ M +G P++ Y
Sbjct: 59 NNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAY 118
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+S+V+ L R++ A L EM+R G P + A + ++QM +
Sbjct: 119 SSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPK 178
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C PN+ YN+L+ + +++ ++ +K D+ +Y L+ +C+ ++ +
Sbjct: 179 HG-CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVE 237
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
E C+ F M G +P +TF TL GL ++ L
Sbjct: 238 EGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGEL 271
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 130/286 (45%), Gaps = 11/286 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI+G KI ++D + + L EM+ RG P++ Y+ L+ + +
Sbjct: 78 PDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAK---------- 127
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + +A +FDEM G PD F ++ +A K + + ++ M + G P V
Sbjct: 128 ARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPV 187
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LCS G++E A L EM + SP TYN + KL+ M+
Sbjct: 188 YNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMR 247
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
VPN+ T++ LI ++ E++ + + + +YT LI GLC +K
Sbjct: 248 AAGY-VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKV 306
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+A + F +M + + P V + +L G + + +L +++
Sbjct: 307 IQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMS 352
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 126/297 (42%), Gaps = 55/297 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV +++LI+G C+ ++ A G M+E G +PN TY L++G+CR
Sbjct: 252 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRA-------- 303
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-----GI 115
EK I+ A ++F++M I PD +++ ++ Y + + S+D+ + + G+
Sbjct: 304 -EKVIQ-ARELFEKMTQACIPPDAVAYNSLIAGYCK----RGSMDEAEKLYREMSGGAGL 357
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
PT+ T+ +++ C G++ A EL+ EM G++ + TY + A++
Sbjct: 358 QPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALE 417
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
+Y+QM+E LD S + GL
Sbjct: 418 VYKQMREKKFL------------------------------------LDPVSCVSFVGGL 441
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
C+ +A F + G +P TF L LI+ + ++L + IT
Sbjct: 442 CKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDIT 498
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 36/164 (21%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M++K I V TY+S++K L + E++ ++L EM+ G
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAG-------------------- 40
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
C P++ +N ++ F N M+ RE++ H+ S D SY
Sbjct: 41 ----------------CNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYH 84
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+LIHGL + K E+ + EM+ +G P + +L R L ++
Sbjct: 85 ILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128
>gi|357436823|ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477735|gb|AES58938.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 587
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 146/282 (51%), Gaps = 11/282 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++++Y ++ GW + ++ AER EM V P+VVTY L+ G CR R
Sbjct: 251 VPSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRM------RR 304
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK + ++ EM GI+P+ ++ ++ + A + + +L + I PT++
Sbjct: 305 VEKAL----EMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLS 360
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S+VK C G IE A ++L +M+ G P TYN FF+ + + M LY +M
Sbjct: 361 TYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLYTKM 420
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E P+ TY++++ M ++++ ++ ++ +DL + TML H LC+ K
Sbjct: 421 IESGHN-PDRLTYHLVLKMLCEEEKLELAVQVSMEMRHKGYDMDLATSTMLTHLLCKMHK 479
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+EA F +MI +G++PQ +TF+ L L + M R+L
Sbjct: 480 LEEAFAEFEDMIRRGIIPQYLTFQKLNVELKKQGMNEMARKL 521
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 80/191 (41%), Gaps = 30/191 (15%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
V +F+I++ Y+RA + ++ F K+K S+V S + E L+
Sbjct: 177 SVGTFAIIIRRYARAGMHKAAIRTFEFAKDK---------KSIVD---SVSEMSLFEILI 224
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
+ + G + A Y L R+ + D VP+I YNI++ +
Sbjct: 225 DSLCKEGSAREASEY------------------LLRRKETDLGWVPSIRVYNIMLNGWFR 266
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
++ +W +K + + +Y L+ G C ++ ++A + EM ++G+ P +
Sbjct: 267 ARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIV 326
Query: 263 FETLYRGLIQS 273
+ + L ++
Sbjct: 327 YNPIIDALAEA 337
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 143/286 (50%), Gaps = 18/286 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +LI G C +D A +GEM E G+EPNVV Y+ LL G C+ R+E
Sbjct: 149 DVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSG------RWE 202
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ KVF EM +GIEPDV ++ ++ + K + + ++ M +G+ P V TY
Sbjct: 203 ----DVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM-K 181
++ C+C G +++A +L +M GV+P TYN K + + AM L +M +
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ PN+ T+N +I + RM ++ ++ + ++L +Y +LI GL K
Sbjct: 319 GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKV 378
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-------SDMLRTWR 280
++A + EM GL P T+ L +G + D+L T R
Sbjct: 379 RKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMR 424
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 152/290 (52%), Gaps = 17/290 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y+SL+ G+CK R + + EM E+G+EP+VV Y L++ +C+
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGK------- 235
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A V D M RG+EP+V +++++++ + + ++ L M EKG+ P V T
Sbjct: 236 ---AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVR--NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++K L +++A LL EMVR N V P+ T+N + A ++ R
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV-RA 351
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCE 237
M E+ C+ N+ TYN+LIG + ++++ E+ + + + LGL+ DS Y++LI G C+
Sbjct: 352 MMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM--TSLGLEPDSFTYSILIKGFCK 409
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+ A M ++G+ P+ + L + + M+ R L ++D
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD 459
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 22/297 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V MYT LI CK+ + A + M+ RG+EPNVVTYNVL+N +C+
Sbjct: 218 PDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCK---------- 267
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE-----KGIC 116
E +++ A V +M +G+ PDV +++ ++ S L +D+ ++ E K I
Sbjct: 268 EGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV----LEMDEAMWLLEEMVRGKNIV 323
Query: 117 -PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P V T+ SV++ LC GR+ A ++ M G + TYN AM+
Sbjct: 324 KPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAME 383
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
L +M L P+ TY+ILI F + ++D ++ + ++ + +L Y L+ +
Sbjct: 384 LMDEMTSLGL-EPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM 442
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
CE+ + A F EM + V + T+ G ++ L+T + L K + +E +T
Sbjct: 443 CEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLT 498
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 125/273 (45%), Gaps = 12/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + S+I G C I R+ A + M E G N+VTYN+L+ G+ R +H
Sbjct: 325 PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR---VH----- 376
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+R A ++ DEM G+EPD ++SI++ + + + + D L+ M+++GI P +
Sbjct: 377 --KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFH 434
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ +C G +E A L EM N Y+ D A +L + +
Sbjct: 435 YIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV 493
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ L P+ TY+I+I MF M+ + + S D+ + LI G K +
Sbjct: 494 DEGL-TPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEI 552
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ + EMI K + TL L+ S+
Sbjct: 553 NKVLELIREMITKNIALDSKIISTLSTSLVASN 585
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 19/271 (7%)
Query: 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+ V+YN +L +CRR ++R +R A + R P+ S+++++
Sbjct: 76 DAVSYNTVLTALCRRGH---HDRAGALLR-AMSLEPHPACR---PNAVSYTVLMRALCAD 128
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
++ L M+ G+ V TY ++++ LC ++ A EL+GEM +G+ P+ Y
Sbjct: 129 RLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVY 188
Query: 158 NCFFKEY--RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+ + Y GR + G K++ +M E + P++ Y LI + + + +
Sbjct: 189 SSLLQGYCKSGRWEDVG--KVFVEMSEKGI-EPDVVMYTGLIDSLCKVGKAKKAHGVMDM 245
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL---IQ 272
+ L ++ +Y +LI+ +C++ KEA +M EKG+ P VT+ TL +GL ++
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLE 305
Query: 273 SD----MLRTWRRLKKKLDEESITFGSEFQN 299
D +L R K + +TF S Q
Sbjct: 306 MDEAMWLLEEMVRGKNIVKPNVVTFNSVIQG 336
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 15/258 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
M N+ Y LI G +++++ A + EM G+EP+ TY++L+ G C+
Sbjct: 359 MVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQ------ 412
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ AE + MR RGIEP++ + +L + + + N M VA
Sbjct: 413 ----VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVA 468
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y++++ C G ++ A+ELL +V G++P A TY+ + D A + +QM
Sbjct: 469 -YSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+P++ ++ LI + ++ V E+ + + LD + L L +
Sbjct: 528 TASGF-LPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNE 586
Query: 241 WKEACQY---FVEMIEKG 255
K Q F I KG
Sbjct: 587 GKALLQSLPDFSAEISKG 604
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 140/273 (51%), Gaps = 11/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +T L+ G+CK R+ A+ L M+ +G++P VVTYN L++G
Sbjct: 175 PDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY----------FL 224
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A+ +F+ M G+ PD+ S+SI+++ + + +++ L M K I P V T
Sbjct: 225 VKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVT 284
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ LC G+I A +L+ EM G P+ TY+ + A+ L QMK
Sbjct: 285 YSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMK 344
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN++TY ILI +++ R+++ + L++ +YT++I G C+K +
Sbjct: 345 NQGI-QPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLF 403
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA +M + G +P T+E + L + D
Sbjct: 404 DEALTLLSKMEDNGCIPNAKTYEIIILSLFKKD 436
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 141/285 (49%), Gaps = 1/285 (0%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ LI +C++ I A L ++++ G +PN +T N L+ G+C +H
Sbjct: 95 PNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCI 154
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+++A +F++M + I PDV +F+I++ + + + + + + L M +GI P V T
Sbjct: 155 VGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVT 214
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ ++ A+ + M + GVSP ++Y+ + K + AM+L ++M
Sbjct: 215 YNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMH 274
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PN+ TY+ LI ++ ++ + + ++ +Y+ ++ LC+ +
Sbjct: 275 HKQI-IPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQV 333
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A +M +G+ P T+ L +GL QS L R++ + L
Sbjct: 334 DNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDL 378
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 34/239 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y+SLI G CK +I A + + EM +RG PN+VTY+ +L+ +C+
Sbjct: 279 IPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKN-------- 330
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ NA + +M+ +GI+P++ +++I++ ++ K + + + KG V
Sbjct: 331 --HQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVY 388
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT +++ C G ++A LL +M NG P+A+TY + + A KL +M
Sbjct: 389 TYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
E + G N D++ IW V GS G L LC+KQ
Sbjct: 449 IETN-----------FDGRVALTN--DLIASIW--VTGSSPGNSL---------LCKKQ 483
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 134/319 (42%), Gaps = 56/319 (17%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N +D A ++++ P + +N +L SL ++ + + ++K M
Sbjct: 41 NDVDDAVSLFNRLLQQNPTPPNIEFNKIL------GSLVKSKHYHTVLYLSQK----MEF 90
Query: 78 RGIEPDV-----------------TSFSIVLHVYSRAHKPQL------------------ 102
RGI+P++ ++FS++ + +KP
Sbjct: 91 RGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHD 150
Query: 103 ----------SLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
++D N M + I P V T+T +V C GR+++A+ +L M+ G+ P
Sbjct: 151 KHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKP 210
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
TYN Y K N A ++ M + + P+I +Y+ILI F + MD E+
Sbjct: 211 GVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVS-PDIQSYSILINGFCKIKMMDEAMEL 269
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ ++ ++ +Y+ LI GLC+ K A + EM ++G P VT+ ++ L +
Sbjct: 270 LKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 329
Query: 273 SDMLRTWRRLKKKLDEESI 291
+ + L ++ + I
Sbjct: 330 NHQVDNAIALLTQMKNQGI 348
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 142/285 (49%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + +T+LI G CK+ A +M+ +G +P+V TYN ++NG+C+
Sbjct: 161 PTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGE------- 213
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +M G +P++ ++S ++ R +LD ++MK KGI P + T
Sbjct: 214 ---TAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFT 270
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS+++ LC R ++A LL EM + P T+N + + A+ + + M
Sbjct: 271 YTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMT 330
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + PN+ TY+ L+ + + R++++ + ++ SY +LI+G C+ ++
Sbjct: 331 EMGV-EPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRI 389
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EA Q F EMI +GL P V++ TL G Q LR + L + +
Sbjct: 390 DEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNM 434
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 135/287 (47%), Gaps = 11/287 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G CKI A L +M E G +PN+VTY+ L++ +CR
Sbjct: 196 PDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCR---------- 245
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A +F M+ +GI PD+ +++ ++ + + + + LN M I P + T
Sbjct: 246 DRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVT 305
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V C G++ +A +L M GV P+ TY+ Y D A KL+ M
Sbjct: 306 FNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMI 365
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PNI +YNILI + R+D +++N + L + SY LIHG C+ K
Sbjct: 366 TKG-CKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKL 424
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+EA F M G LP T+ L G + L RL + +
Sbjct: 425 REAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQS 471
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 135/275 (49%), Gaps = 11/275 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YTSLI G CK +R A L EM + P++VT+NVL++ C+
Sbjct: 266 PDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCK---------- 315
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A V M G+EP+V ++S +++ YS + + M KG P + +
Sbjct: 316 EGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFS 375
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C RI++A +L EM+ G++P+ +YN + A L+R M
Sbjct: 376 YNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMC 435
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +P++ TY+IL+ F + ++ ++ + L +L YT+L+H +C+
Sbjct: 436 TNG-NLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNH 494
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K+A + F E+ +GL P + T+ GL + +L
Sbjct: 495 KDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLL 529
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 10/247 (4%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
ID A M+ R P ++ + LL+ + + ++ + + K +M + G
Sbjct: 73 IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMG------QYYDVVISLSK---QMELVG 123
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
+ P++ + SI ++ + + + L L + + G+ PT+ T+T+++ LC G A
Sbjct: 124 LSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAV 183
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
EL +MV G P TYN + A L ++M+E C PN+ TY+ LI
Sbjct: 184 ELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAG-CQPNMVTYSTLIDS 242
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
++ +I++++K + D+ +YT LI GLC+ +WKEA EM ++P
Sbjct: 243 LCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPD 302
Query: 260 KVTFETL 266
VTF L
Sbjct: 303 IVTFNVL 309
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-HPNER 60
PN+ Y LI G+CK RID A + EMI +G+ PN V+YN L++G C+ L +
Sbjct: 371 PNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDL 430
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F N A ++F M+ ++P++ ++I++H +
Sbjct: 431 FRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCK 490
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + + + +G+ P V YT+++ LC G +++A E M +G P +
Sbjct: 491 SGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEIS 550
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKE 182
YN + KD + A+ L +M++
Sbjct: 551 YNVIIRGLLQHKDESRALLLVGEMRD 576
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 141/288 (48%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++K YT L+ GW + + EM ++G + +VV Y +++N C+ ++F
Sbjct: 222 PDIKSYTILLEGWSQQQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAHCK------AKKF 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ I ++ EM+ RG+ P + +++ + +L+ K G P T
Sbjct: 276 DEAI----GLYHEMKARGVRPSPHVYCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPT 331
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +VV C R++DA ++GEM + G+ P++ T++ + A ++R+M
Sbjct: 332 YNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRMN 391
Query: 182 EDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P++ TY I++ MF +DM +W+ +KG + + ++ L+ LC + K
Sbjct: 392 GGEFGCEPSVSTYEIMVRMFCNEELLDMAVAVWDEMKGKGILPGMHMFSTLVCALCHESK 451
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
EAC+YF EM++ G+ P F TL L+ + M K+D+
Sbjct: 452 LDEACKYFQEMLDVGIRPPAKMFSTLKEALVDAGMEHVAMHFTLKIDK 499
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 25/262 (9%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G++P+V +N L++ +C+ K++ A +VFD+MR ++PD+ S++I+L
Sbjct: 184 GLKPHVSDFNKLVDVLCK----------SKSVEEAHEVFDKMRKLRLDPDIKSYTILLEG 233
Query: 94 YSRAHKPQLSLDKLN----FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+S+ Q +L K+N M++KG V Y ++ C + ++A L EM G
Sbjct: 234 WSQ----QQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARG 289
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
V PS Y K + A++ + K VP TYN ++G + RMD
Sbjct: 290 VRPSPHVYCTLINGLGSDKRLDEALEFFEVSKASGF-VPEAPTYNAVVGAYCWSLRMDDA 348
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI--EKGLLPQKVTFETLY 267
+ +K +G + ++ +++H L + ++ +EA F M E G P T+E +
Sbjct: 349 YRMVGEMKKCGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMV 408
Query: 268 RGLIQSDML----RTWRRLKKK 285
R ++L W +K K
Sbjct: 409 RMFCNEELLDMAVAVWDEMKGK 430
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 83/160 (51%), Gaps = 12/160 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P Y +++ +C R+D A R +GEM + G+ PN T++++L+ + +
Sbjct: 326 VPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRTFDIVLHHLIKG-------- 377
Query: 61 FEKTIRNAEKVFDEMRVR--GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ I A VF M G EP V+++ I++ ++ +++ + MK KGI P
Sbjct: 378 --RRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMAVAVWDEMKGKGILPG 435
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
+ ++++V LC ++++A + EM+ G+ P A+ ++
Sbjct: 436 MHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFS 475
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 85/181 (46%), Gaps = 1/181 (0%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
+FS+V Y+RA K + ++ M+ G+ P V+ + +V LC +E+A E+ +M
Sbjct: 156 TFSLVARRYARARKAKEAIKTFEKMEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKM 215
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+ + P ++Y + + +++ ++ R+M ED ++ Y I++ +
Sbjct: 216 RKLRLDPDIKSYTILLEGWSQQQNLIKVNEVCREM-EDKGFQLDVVAYGIIMNAHCKAKK 274
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
D +++ +K + Y LI+GL ++ EA ++F G +P+ T+
Sbjct: 275 FDEAIGLYHEMKARGVRPSPHVYCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNA 334
Query: 266 L 266
+
Sbjct: 335 V 335
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 134/271 (49%), Gaps = 10/271 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++K YT L+ GW K + + + EM G EP+VVTY +L++ C+
Sbjct: 258 VPDIKSYTILLEGWGKEHNLLRLDEVYLEMKYDGFEPDVVTYGILISAYCK--------- 308
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K A ++F EM + +P + +++ + +L+ K G P
Sbjct: 309 -AKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAP 367
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S+V C RI+DA +++ EM ++ P++ TY+ + N A +++M
Sbjct: 368 TYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKM 427
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P + TY I++ MF +R+D+ +++W+ +K + + Y+ LI LC K K
Sbjct: 428 SNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNK 487
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
EAC+YF EM++ G+ P F L + L+
Sbjct: 488 LGEACKYFQEMLDAGIRPPAKMFSNLKQALL 518
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 108/235 (45%), Gaps = 12/235 (5%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
++G + N +YN L+ + + K IR+ + +EM+ R + + +F+++
Sbjct: 150 QKGFKYNTESYNALIEALGKIKQF-------KLIRS---LVNEMKSRKL-LNKDTFALIS 198
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
++RA K + +++ M+E G + + ++ LC +E A ++ +M +
Sbjct: 199 RRHARARKVEEAIEAFERMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFV 258
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P ++Y + + + ++Y +MK D P++ TY ILI + + D E
Sbjct: 259 PDIKSYTILLEGWGKEHNLLRLDEVYLEMKYDGF-EPDVVTYGILISAYCKAKKYDAAIE 317
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+++ ++ Y LI+GL +++ EA ++F G P+ T+ +L
Sbjct: 318 LFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSL 372
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 143/286 (50%), Gaps = 18/286 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +LI G C +D A +GEM E G+EPNVV Y+ LL G C+ R+E
Sbjct: 149 DVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSG------RWE 202
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ KVF EM +GIEPDV ++ ++ + K + + ++ M +G+ P V TY
Sbjct: 203 ----DVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM-K 181
++ C+C G +++A +L +M GV+P TYN K + + AM L +M +
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ PN+ T+N +I + RM ++ ++ + ++L +Y +LI GL K
Sbjct: 319 GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKV 378
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-------SDMLRTWR 280
++A + EM GL P T+ L +G + D+L T R
Sbjct: 379 RKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMR 424
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 152/290 (52%), Gaps = 17/290 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y+SL+ G+CK R + + EM E+G+EP+VV Y L++ +C+
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGK------- 235
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A V D M RG+EP+V +++++++ + + ++ L M EKG+ P V T
Sbjct: 236 ---AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVR--NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++K L +++A LL EMVR N V P+ T+N + A ++ R
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV-RA 351
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCE 237
M E+ C+ N+ TYN+LIG + ++++ E+ + + + LGL+ DS Y++LI G C+
Sbjct: 352 MMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM--TSLGLEPDSFTYSILIKGFCK 409
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+ A M ++G+ P+ + L + + M+ R L ++D
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD 459
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 22/297 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V MYT LI CK+ + A + M+ RG+EPNVVTYNVL+N +C+
Sbjct: 218 PDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCK---------- 267
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE-----KGIC 116
E +++ A V +M +G+ PDV +++ ++ S L +D+ ++ E K I
Sbjct: 268 EGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV----LEMDEAMWLLEEMVRGKNIV 323
Query: 117 -PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P V T+ SV++ LC GR+ A ++ M G + TYN AM+
Sbjct: 324 KPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAME 383
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
L +M L P+ TY+ILI F + ++D ++ + ++ + +L Y L+ +
Sbjct: 384 LMDEMTSLGL-EPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM 442
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
CE+ + A F EM + V + T+ G ++ L+T + L K + +E +T
Sbjct: 443 CEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLT 498
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 125/273 (45%), Gaps = 12/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + S+I G C I R+ A + M E G N+VTYN+L+ G+ R +H
Sbjct: 325 PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR---VH----- 376
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+R A ++ DEM G+EPD ++SI++ + + + + D L+ M+++GI P +
Sbjct: 377 --KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFH 434
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ +C G +E A L EM N Y+ D A +L + +
Sbjct: 435 YIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV 493
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ L P+ TY+I+I MF M+ + + S D+ + LI G K +
Sbjct: 494 DEGL-TPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEI 552
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ + EMI K + TL L+ S+
Sbjct: 553 NKVLELIREMITKNIALDSKIISTLSTSLVASN 585
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 19/271 (7%)
Query: 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+ V+YN +L +CRR ++R +R A + R P+ S+++++
Sbjct: 76 DAVSYNTVLTALCRRGH---HDRAGALLR-AMSLEPHPACR---PNAVSYTVLMRALCAD 128
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
++ L M+ G+ V TY ++++ LC ++ A EL+GEM +G+ P+ Y
Sbjct: 129 RLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVY 188
Query: 158 NCFFKEY--RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+ + Y GR + G K++ +M E + P++ Y LI + + + +
Sbjct: 189 SSLLQGYCKSGRWEDVG--KVFVEMSEKGI-EPDVVMYTGLIDSLCKVGKAKKAHGVMDM 245
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL---IQ 272
+ L ++ +Y +LI+ +C++ KEA +M EKG+ P VT+ TL +GL ++
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLE 305
Query: 273 SD----MLRTWRRLKKKLDEESITFGSEFQN 299
D +L R K + +TF S Q
Sbjct: 306 MDEAMWLLEEMVRGKNIVKPNVVTFNSVIQG 336
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 17/266 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
M N+ Y LI G +++++ A + EM G+EP+ TY++L+ G C+
Sbjct: 359 MVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQ------ 412
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ AE + MR RGIEP++ + +L + + + N M VA
Sbjct: 413 ----VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVA 468
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y++++ C G ++ A+ELL +V G++P A TY+ + D A + +QM
Sbjct: 469 -YSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+P++ ++ LI + ++ V E+ + + LD + L L +
Sbjct: 528 TASGF-LPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNE 586
Query: 241 WKEACQY---FVEMIEKGLL--PQKV 261
K Q F I KG + PQ++
Sbjct: 587 GKALLQSLPDFSAEISKGNINSPQEL 612
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 144/292 (49%), Gaps = 11/292 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ N+ Y SL+ CK ++ A +M+++G+ P V+YN ++ G CR+ +L
Sbjct: 450 IANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDM--- 506
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A VF +M G++P+V ++SI++ Y + + + + M ++ I P+
Sbjct: 507 -------AASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDF 559
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY + LC GR +A+++L + V G P TYN + + A+ YR+M
Sbjct: 560 TYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREM 619
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + PN+ TY LI F N D+ ++ N ++ L LD+ +Y LI G C+KQ
Sbjct: 620 CESGVS-PNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQD 678
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ A F E+++ GL P V + +L G + + L+K++ E I+
Sbjct: 679 IETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGIS 730
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 143/292 (48%), Gaps = 11/292 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y I G CK+ R A+ L + +E+G P +TYN +++G +
Sbjct: 555 VPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIK--------- 605
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E ++ +A + EM G+ P+V +++ +++ + + + L+L N M+ KG+ +A
Sbjct: 606 -EGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIA 664
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C IE A L E++ G+SP++ YN YR + A+ L ++M
Sbjct: 665 AYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRM 724
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + ++ TY LI + R+ + ++++ + + D+ YT+LI+GLC K +
Sbjct: 725 LGEGISC-DLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQ 783
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ A + EM + P + L G ++ L+ RL ++ ++ +T
Sbjct: 784 LENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLT 835
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 140/340 (41%), Gaps = 48/340 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P Y S+I G C+ +DMA +M++ G++PNV+TY++L++G +
Sbjct: 486 PTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGD------- 538
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A VFD M I P +++I ++ + + + D L EKG P T
Sbjct: 539 ---TEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLT 595
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ G + A EM +GVSP+ TY + + + A+K+ +M+
Sbjct: 596 YNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMR 655
Query: 182 E--------------DDLC--------------------VPNIHTYNILIGMFMALNRMD 207
D C PN YN LI + LN M+
Sbjct: 656 NKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNME 715
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ + G + DL +YT LI GL ++ + A + EM KG++P + + L
Sbjct: 716 AALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLI 775
Query: 268 RGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY----HFK 303
GL L +++ +++ +SIT N HFK
Sbjct: 776 NGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFK 815
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 127/337 (37%), Gaps = 78/337 (23%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P +K L+ K + I A +M+ +GV + T ++++ RA+L N
Sbjct: 206 VPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMM-----RANLKDNNE 260
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E A+K F E + RG++ D ++SIV+ + + +L+ L M++KG P+
Sbjct: 261 EE-----AKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEG 315
Query: 121 TYTSVVKC----------------LCSCG-------------------RIEDAEELLGEM 145
T+TSV+ + SCG ++ A E +M
Sbjct: 316 TFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKM 375
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC------------------- 186
NG SP+ TY + + A LY QMK ++C
Sbjct: 376 NENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESR 435
Query: 187 --------------VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
+ NI TYN L+ +M +W + L SY +I
Sbjct: 436 EEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMI 495
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
G C + A F +M++ GL P +T+ L G
Sbjct: 496 LGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDG 532
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNG 48
PNV +Y +LI G K + A R EM+++G+ PN TY++L+NG
Sbjct: 801 PNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILING 847
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 83/206 (40%), Gaps = 36/206 (17%)
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
+ D+ ++ +L+ Y +A+K ++ N + E I P + ++ L I +A E
Sbjct: 171 DSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEARE 230
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
+ +MV GV +CF T +I++
Sbjct: 231 VYEKMVLKGVHG-----DCF-------------------------------TVHIMMRAN 254
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+ N + ++ + K + LD +Y+++I C+ + AC +M +KG +P +
Sbjct: 255 LKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSE 314
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKL 286
TF ++ ++ + RLK ++
Sbjct: 315 GTFTSVIGACVKQGNMVEALRLKDEM 340
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 145/299 (48%), Gaps = 26/299 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YTSLIYG+C + ++D A L EM+ + V PNV T+N L++G+C+ + +
Sbjct: 222 PNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSL 281
Query: 62 E-------------------------KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
K A+ VF+ M G+ DV S+S+++ S+
Sbjct: 282 VAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSK 341
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++D M+ + + P V Y+S++ LC GRI A + + EM G P+ T
Sbjct: 342 MKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVIT 401
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + A+ L +++K+ + N++TYNIL+ R+ ++++ +
Sbjct: 402 YTSLIDALCKSHQVDKAIALLKKIKDQGI-QANMYTYNILVDGLCKDGRLTDAQKVFQDL 460
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+D+ +Y+++I+GLC++ + EA +M +KG +P + +ET+ + DM
Sbjct: 461 LMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDM 519
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 147/285 (51%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CKI + A R L ++ P+VV YN +++G+C+ +K +R
Sbjct: 157 YGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCK----------DKLVR 206
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A ++ EM + + P+V +++ +++ + + + LN M K + P V T+ ++V
Sbjct: 207 DAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLV 266
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G++ +A+ L+ M++ GV P TYN Y K+A A ++ M + +
Sbjct: 267 DGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVT 326
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
++H+Y+++I + +D +++ ++ + D+ +Y+ LI GLC+ + A +
Sbjct: 327 C-DVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALK 385
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
Y EM ++G P +T+ +L L +S + L KK+ ++ I
Sbjct: 386 YVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGI 430
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+SLI G CK RI+ A +++ EM +RG PNV+TY L++ +C+ + +
Sbjct: 361 IPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCK------SHQ 414
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K I +K+ D+ GI+ ++ +++I++ + + + + KG V
Sbjct: 415 VDKAIALLKKIKDQ----GIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVV 470
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+ ++ LC ++A LL +M G P A Y + + + A KL R+M
Sbjct: 471 TYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 107/237 (45%), Gaps = 11/237 (4%)
Query: 33 RGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
G++ N +T N+L+N C + I +A VF ++ G +PD+ +++ ++
Sbjct: 78 HGIQSNYITLNILINSYCHL----------RQINSAFSVFAKILKLGYQPDIITYTTLIR 127
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+ + SL+ + + +GI +Y +++ LC G+ A LL ++ P
Sbjct: 128 GLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRP 187
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
YN K A LY +M E + PN+ TY LI F + ++D +
Sbjct: 188 DVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRV-FPNVVTYTSLIYGFCIVGQLDKAFGL 246
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
N + + ++ ++ L+ GLC++ K +EA M+++G+ P T+ L G
Sbjct: 247 LNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDG 303
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 105/224 (46%), Gaps = 7/224 (3%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+F M + GI+ + + +I+++ Y + + + + G P + TYT++++ LC
Sbjct: 71 LFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLC 130
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
G+++++ +V G+ +Y A++L R++ E ++C P++
Sbjct: 131 LNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKI-EGEICRPDV 189
Query: 191 HTYNILIGMFMALNRMDMVREIWN---HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
YN +I L + +VR+ ++ + + ++ +YT LI+G C + +A
Sbjct: 190 VMYNTIID---GLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGL 246
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM+ K + P TF TL GL + +R + L + +E +
Sbjct: 247 LNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGV 290
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 147/288 (51%), Gaps = 15/288 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV--CRRASLHPNE 59
P+++ YT L+ GWC++ + A R EMI+RG P++V +NV+L G+ C++ S
Sbjct: 201 PSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDIVAHNVMLEGLLKCKKKS----- 255
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+A K+F+ M+ +G P+V S++I++ + + +++ + M ++G P
Sbjct: 256 -------DAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDA 308
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
A YT ++ +++ LL EM G P TYN K + + A+++Y++
Sbjct: 309 ALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKK 368
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + + P IHTYN+++ + +M EIW+ + D +SY + I GL +
Sbjct: 369 MIQSGI-KPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHPKGCCPDDNSYIVYIGGLIRQD 427
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+ EAC+Y EM+EKG+ K+ + + ++ L +K++
Sbjct: 428 RSGEACKYLEEMLEKGMKALKLDYNKFASDISKTGNAVILEELARKMN 475
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 2/221 (0%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+FD M+ G + V + +L S A + + +K++ P++ TYT ++ C
Sbjct: 156 IFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDR-FTPSLQTYTILLSGWC 214
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
+ +A + EM+ G +P +N + K + A+KL+ MK PN+
Sbjct: 215 RLKNLLEAGRVWNEMIDRGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPS-PNV 273
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
+Y I+I F M E ++ + D YT LI G ++K E
Sbjct: 274 RSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKE 333
Query: 251 MIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
M E+G P T+ L + + M R+ KK+ + I
Sbjct: 334 MRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGI 374
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 110/238 (46%), Gaps = 15/238 (6%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G + TYN ++ + R +FE + E EM +G+ + +FSI +
Sbjct: 95 GFAHDSRTYNFMMCVLGR------TRQFETMVAKLE----EMGEKGL-LTMETFSIAIKA 143
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
++ A + + + + MK+ G V ++ L + ++A+ + E +++ +PS
Sbjct: 144 FAEAKQRKKEVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVF-EKLKDRFTPS 202
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVREI 212
+TY + K+ A +++ +M + P+I +N+++ G+ + D ++ +
Sbjct: 203 LQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFN-PDIVAHNVMLEGLLKCKKKSDAIK-L 260
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ +K ++ SYT++I C+++ EA +YF M+++G P + L G
Sbjct: 261 FEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGF 318
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 152/291 (52%), Gaps = 21/291 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V ++++++ CK +I A + MI RGVEPNVVTYN L++G C
Sbjct: 276 MPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHC---------- 325
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF----MKEKGIC 116
+ + A KVFD M G P+V S++ +++ Y + + +DK + M +K +
Sbjct: 326 LQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQR----MDKATYLFEEMCQKELI 381
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P TY +++ C GR++DA L EMV +G P TY + + AM L
Sbjct: 382 PNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMAL 440
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+ ++ ++ P+I Y I+I ++ R+I++++ L ++ +YT++I+GLC
Sbjct: 441 LKTIEGSNM-DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLC 499
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRLKKKL 286
+ EA + F+EM G P T+ T+ +GL+Q+ + LR + L++ L
Sbjct: 500 RRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML 550
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 142/311 (45%), Gaps = 27/311 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI G C +I A +MI G +PNVVTY L+NG+C+ + + R
Sbjct: 137 PDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRL 196
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
++ + A +F +M +GI PD+ +++ ++H
Sbjct: 197 LRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCN 256
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + LN M I P V +++VV LC G+I +A +++ M+ GV P+ T
Sbjct: 257 LCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVT 316
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + + + A+K++ M + PN+ +YN LI + + RMD ++ +
Sbjct: 317 YNALMDGHCLQSEMDEAVKVFDTMVHNGY-APNVISYNTLINGYCKIQRMDKATYLFEEM 375
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
EL + +Y L+H C + ++A F EM+ G +P T+ L L + L
Sbjct: 376 CQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHL 434
Query: 277 RTWRRLKKKLD 287
L K ++
Sbjct: 435 DEAMALLKTIE 445
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 14/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YTSLI+ C + L +MI + P+VV ++ +++ +C+
Sbjct: 242 PDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCK---------- 291
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A V D M +RG+EP+V +++ ++ + + ++ + M G P V +
Sbjct: 292 EGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVIS 351
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE-YRGRKDANGAMKLYRQM 180
Y +++ C R++ A L EM + + P+ TYN + GR A+ L+ +M
Sbjct: 352 YNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGR--LQDAIALFHEM 409
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+P++ TY IL+ + +D + ++GS + D+ YT++I G+C +
Sbjct: 410 VAHGQ-IPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 468
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+ A F + KGL P T+ + GL + +L +L ++D
Sbjct: 469 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 515
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 11/253 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N +D A M+ P+ V +N LL + + K + ++M
Sbjct: 48 NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAK----------TKQYPTVFSLSNQMDS 97
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
GI PDV + +I+++ + ++ + L + + G P AT+T++++ LC G+I D
Sbjct: 98 FGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGD 157
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A L +M+ G P+ TY + N A++L R M++ + C P++ Y +I
Sbjct: 158 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN-CQPDVVVYTSII 216
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
++ +++ + G + D+ +YT LIH LC +WK +MI ++
Sbjct: 217 DSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIM 276
Query: 258 PQKVTFETLYRGL 270
P V F T+ L
Sbjct: 277 PDVVIFSTVVDAL 289
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 124/324 (38%), Gaps = 59/324 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+ + L+ K + +M G+ P+V T N+L+N C L
Sbjct: 67 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126
Query: 56 ---------HPNER----------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P+ E I +A +FD+M G +P+V ++ +++ +
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ L M++ P V YTS++ LC ++ +A L +MV G+SP T
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 246
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKE--------------DDLCV--------------- 187
Y + L QM D LC
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 306
Query: 188 -----PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
PN+ TYN L+ + MD ++++ + + ++ SY LI+G C+ Q+
Sbjct: 307 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 366
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
+A F EM +K L+P VT+ TL
Sbjct: 367 KATYLFEEMCQKELIPNTVTYNTL 390
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++++YT +I G C+ ++ A + +G+ PNV TY +++NG+CRR L
Sbjct: 451 PDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLL------ 504
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+F EM G PD +++ + + + ++ L M +G V+T
Sbjct: 505 ----DEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVST 560
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVR 147
T +V+ LC + +++L E V+
Sbjct: 561 TTLLVEMLCDDKLDQSVKQILSEFVQ 586
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 1/154 (0%)
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
++DA M+ PS +N K L QM + P+++T N
Sbjct: 50 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGI-PPDVYTLN 108
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
ILI F LNR+ + + D ++T LI GLC + K +A F +MI +
Sbjct: 109 ILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE 168
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
G P VT+ TL GL + RL + +++
Sbjct: 169 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQ 202
>gi|242094080|ref|XP_002437530.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
gi|241915753|gb|EER88897.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
Length = 540
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 148/283 (52%), Gaps = 15/283 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RRASLHPNE 59
P+V++Y L+ GW + R+D E+ M + GV P VVTY ++ C RR P++
Sbjct: 182 PDVRVYNILLNGWSRARRLDKVEKLWAAMRDEGVRPTVVTYGTFIDAYCVMRR----PDQ 237
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
A + D+MR GI+ ++ + + +++ ++A + + L G+ P +
Sbjct: 238 --------AMTLLDQMREEGIQANLLTCNPIVYALAQAGRFGDAHKVLEKFPLYGVSPNI 289
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+T+ S+V C G + A +L M+ G+SP+A TYN FF + + M LY +
Sbjct: 290 STFNSLVFGYCKHGDLAGASGVLKAMLGRGISPTARTYNYFFMVFSRNRSIELGMNLYVK 349
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + P+ TY++LI M NR+++ ++ ++ + D + TMLIH LC +
Sbjct: 350 MVSNGYA-PDQFTYHLLIKMLCEANRLELTLQMLQEMRNNGFEPDQATSTMLIHLLCRRH 408
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++EA F +M E+G++PQ +T+ L + L + +++ ++L
Sbjct: 409 HFEEAFAEFEQMFERGIVPQYITYRMLMKELKRLGLVKLVQKL 451
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 79/198 (39%), Gaps = 7/198 (3%)
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR--NGVSPSAETYNCFFKEYRGRKD 169
E + P + T V LC G A L+ ++ R G +P YN + +
Sbjct: 144 EAAVSPLILT----VDALCKEGHPRAAARLVAQVRREDGGWAPDVRVYNILLNGWSRARR 199
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
+ KL+ M+ D+ P + TY I + + R D + + ++ + +L +
Sbjct: 200 LDKVEKLWAAMR-DEGVRPTVVTYGTFIDAYCVMRRPDQAMTLLDQMREEGIQANLLTCN 258
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
+++ L + ++ +A + + G+ P TF +L G + L + K +
Sbjct: 259 PIVYALAQAGRFGDAHKVLEKFPLYGVSPNISTFNSLVFGYCKHGDLAGASGVLKAMLGR 318
Query: 290 SITFGSEFQNYHFKPYRR 307
I+ + NY F + R
Sbjct: 319 GISPTARTYNYFFMVFSR 336
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 139/268 (51%), Gaps = 11/268 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ Y ++ CK ++D A L M+ +G+ PNVV+YN ++ G CR+ ++
Sbjct: 468 NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMD------ 521
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A VF +M R ++P+V ++SI++ + + +LD + M I PT T+
Sbjct: 522 ----MASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTF 577
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC G++ +A + L + G PS TYN + + + A+ +YR+M E
Sbjct: 578 NTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCE 637
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ PN+ TY LI F NR+D+ + + ++ L LD+ +Y+ LI G C+++ +
Sbjct: 638 FGVS-PNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDME 696
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGL 270
A F E++E GL P ++ + ++ G
Sbjct: 697 SAQDLFFELLEVGLSPNRIVYNSMISGF 724
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 147/327 (44%), Gaps = 46/327 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +I G C+ +DMA +M+ R ++PNVVTY++L++G ++
Sbjct: 501 VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD------ 554
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +FD+M I P +F+ +++ + + + DKL E+G P+
Sbjct: 555 ----SEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 610
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYR----------- 165
TY S+V G I+ A + EM GVSP+ TY N F K R
Sbjct: 611 TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 670
Query: 166 --------------------GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
R+D A L+ ++ E L PN YN +I F LN
Sbjct: 671 REKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLS-PNRIVYNSMISGFRDLNN 729
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
M+ + + + DL +YT LI GL ++ + A ++EM+ KG++P +TF
Sbjct: 730 MEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHV 789
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESIT 292
L GL L R++ +++D +++T
Sbjct: 790 LVNGLCNKGQLENARKILEEMDRKNMT 816
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 138/276 (50%), Gaps = 11/276 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + ++I G CK+ ++ A L +E G P+ +TYN +++G +
Sbjct: 572 PTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIK---------- 621
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I +A V+ EM G+ P+V +++ +++ + ++++ L+L + M+EKG+ V
Sbjct: 622 EGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTA 681
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C +E A++L E++ G+SP+ YN +R + A+ Y++M
Sbjct: 682 YSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI 741
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + ++ TY LI + R+ +++ + + D+ ++ +L++GLC K +
Sbjct: 742 NDRIPC-DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQL 800
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+ A + EM K + P + + TL G + L+
Sbjct: 801 ENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLK 836
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
PNV YTSLI G+CK NRID+A + EM E+G+E +V Y+ L++G C+R
Sbjct: 642 PNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDL 701
Query: 53 ------ASLHPNERFEKTIRNAEKVFDEMRVR----------GIEPDVTSFSIVLHVYSR 96
L PN ++ + + + M I D+ +++ ++ +
Sbjct: 702 FFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLK 761
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D M KGI P + T+ +V LC+ G++E+A ++L EM R ++PS
Sbjct: 762 EGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLI 821
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
YN Y + A L+ +M + L VP+ TY+ILI
Sbjct: 822 YNTLIAGYFREGNLKEAFTLHDEMLDRGL-VPDDVTYDILI 861
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 126/295 (42%), Gaps = 47/295 (15%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
++ K R++ AE + E ERGV+ + Y++++ VC++ PN
Sbjct: 266 MVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK----PNSNL------GL 315
Query: 70 KVFDEMRVRGIEPDVTSF-SIVLHVYSRAH---------------KP------------- 100
++ +EM+ RG P +F S+++ ++ + KP
Sbjct: 316 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 375
Query: 101 --QLSLDK----LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
Q +LD N + E G+ P TY+ +++ C+ G IE A EL +M NG+ PS
Sbjct: 376 CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSV 435
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
N + Y A KL+ + D V NI TYNI++ +MD + +
Sbjct: 436 FNVNSLLRGYLKAPLWEEASKLFDEAV--DCGVANIFTYNIMMSWLCKGGKMDEACSLLD 493
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ + ++ SY +I G C K A F +M+ + L P VT+ L G
Sbjct: 494 NMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDG 548
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 26/277 (9%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA----------- 53
+++ L+ + + NRI+ A MI + V P V N+LL + RR
Sbjct: 191 RVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNK 250
Query: 54 -----------SLHPNERF---EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK 99
++H R E + AE+ F E + RG++ D ++SI++ +
Sbjct: 251 MVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPN 310
Query: 100 PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC 159
L L+ L MKE+G P+ AT+TSV+ + G + +A L EM+ G +
Sbjct: 311 SNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATS 370
Query: 160 FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
K Y + + + A+ L+ ++ ED L PN TY++LI ++ E++ +K +
Sbjct: 371 LMKGYCAQGNLDSALNLFNKITEDGL-FPNKVTYSVLIEGCCNSGNIEKASELYTQMKLN 429
Query: 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
+ + + L+ G + W+EA + F E ++ G+
Sbjct: 430 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV 466
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 103/254 (40%), Gaps = 18/254 (7%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
I+ A+RF E+ R +N LLN R I NA F+ M +
Sbjct: 178 INCAKRFDFELDHR-------VFNYLLNAYIR----------ANRIENAIDCFNAMICQD 220
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
+ P V +I+L R + D N M +GI T +V+ GR+E+AE
Sbjct: 221 VIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAE 280
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
E E GV A Y+ + + ++N ++L +MKE VP+ T+ +I
Sbjct: 281 EYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGW-VPSEATFTSVIVA 339
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+A M + + ++L T L+ G C + A F ++ E GL P
Sbjct: 340 CVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPN 399
Query: 260 KVTFETLYRGLIQS 273
KVT+ L G S
Sbjct: 400 KVTYSVLIEGCCNS 413
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 111/299 (37%), Gaps = 66/299 (22%)
Query: 15 CKINRIDMAERFLGEM-IERGVEPNVVTYNVLLNGVCRRASLHPNER------------- 60
C +N A R+ +RG V Y VLL+ + R H + R
Sbjct: 109 CHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSDP 168
Query: 61 ----FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
F + N K FD E D F+ +L+ Y RA++ + ++D N M + +
Sbjct: 169 SPVVFVDHLINCAKRFD------FELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVI 222
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P V ++ L I + +L +MV G+ Y F
Sbjct: 223 PWVPYMNILLTALVRRNMIGELRDLYNKMVLRGI------YGDHF--------------- 261
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
T ++++ + R++ E + K + LD +Y+++I +C
Sbjct: 262 ---------------TVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVC 306
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI-QSDMLRTWRRLKKKLDEESITFG 294
+K + EM E+G +P + TF ++ + Q +M+ R L EE I G
Sbjct: 307 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALR-----LKEEMINCG 360
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 12/280 (4%)
Query: 14 WCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFD 73
+CK ++D A FL M ++G+EPNVV YN ++ CR K + A +F
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRM----------KNMDLARSIFS 508
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
EM +G+EP+ ++SI++ + + Q + D +N M Y +++ LC G
Sbjct: 509 EMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVG 568
Query: 134 RIEDAEELLGEMVRNG-VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
+ A+E+L +++ S S +YN + D + A++ YR+M E+ PN+ T
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS-PNVVT 627
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
+ LI F NRMD+ E+ + +K EL LDL +Y LI G C+K K A F E+
Sbjct: 628 FTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELP 687
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
E GL+P + +L G + L KK+ + I+
Sbjct: 688 ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS 727
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 142/317 (44%), Gaps = 27/317 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
PNV Y +++ C++ +D+A EM+E+G+EPN TY++L++G +
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 53 ------ASLHPNERFEKTIRNA-----------EKVFDEMRVRGIEPDVTSFSIVLHVYS 95
++ NE TI N E + + ++ + TS++ ++ +
Sbjct: 542 INQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFV 601
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ +++ M E G P V T+TS++ C R++ A E+ EM +
Sbjct: 602 KVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLP 661
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
Y + + D A L+ ++ E L +PN+ YN LI F L +MD +++
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGL-MPNVSVYNSLISGFRNLGKMDAAIDLYKK 720
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ + DL +YT +I GL + A + E+++ G++P ++ L GL +
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780
Query: 276 LRTWRRLKKKLDEESIT 292
++ +++ ++ +T
Sbjct: 781 FLKASKMLEEMKKKDVT 797
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 122/266 (45%), Gaps = 11/266 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y S+I G+ K+ D A EM E G PNVVT+ L+NG C+ +
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL--------- 643
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++ EM+ ++ D+ ++ ++ + + + + + + + E G+ P V+ Y S++
Sbjct: 644 -ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ G+++ A +L +MV +G+S TY + N A LY ++ + +
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGI- 761
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VP+ + +L+ + ++ +K ++ ++ Y+ +I G + EA +
Sbjct: 762 VPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFR 821
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQ 272
EM+EKG++ F L G ++
Sbjct: 822 LHDEMLEKGIVHDDTVFNLLVSGRVE 847
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 128/312 (41%), Gaps = 33/312 (10%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF---EKT 64
TSL+ G+CK N + A M E G+ P+ V ++V++ C+ + F K+
Sbjct: 349 TSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKS 408
Query: 65 IRNA-EKVFDEMRVRGI----EPDVT------SF-SIVLH---------VYSRAHKPQLS 103
+R A V ++G P+ SF S + H ++ + K +
Sbjct: 409 VRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAA 468
Query: 104 LDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163
L M++KGI P V Y +++ C ++ A + EM+ G+ P+ TY+
Sbjct: 469 TSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDG 528
Query: 164 YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE-IWNHVKGSELG 222
+ KD A + QM + + YN +I + + +E + N +K
Sbjct: 529 FFKNKDEQNAWDVINQMNASNFEANEV-IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYS 587
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD-------M 275
+ SY +I G + A + + EM E G P VTF +L G +S+ M
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM 647
Query: 276 LRTWRRLKKKLD 287
+ ++ KLD
Sbjct: 648 THEMKSMELKLD 659
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 12/254 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V +++ + N ID A+ +M+ GV + VT +L+ RASL
Sbjct: 201 VPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLM-----RASLR---- 251
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-GICPTV 119
E+ A K+F + RG EPD FS+ + + ++LD L M+ K G+ +
Sbjct: 252 -ERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQ 310
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYTSV+ G +E+A ++ EMV G+ S Y + A+ L+ +
Sbjct: 311 ETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNR 370
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+E+ L P+ +++++ F M+ E + +K + +I G + +
Sbjct: 371 MEEEGLA-PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAE 429
Query: 240 KWKEACQYFVEMIE 253
+ A + F + E
Sbjct: 430 SPEAALEIFNDSFE 443
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV +Y SLI G+ + ++D A +M+ G+ ++ TY +++G+ +
Sbjct: 692 MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLK--------- 742
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ I A ++ E+ GI PD ++++ S+ + + L MK+K + P V
Sbjct: 743 -DGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVL 801
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
Y++V+ G + +A L EM+ G+ +N
Sbjct: 802 LYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFN 839
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 22/284 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNER 60
P+ +++ + CK + MA L EM + GV + TY ++ +
Sbjct: 272 PDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVK--------- 322
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A +V DEM GI V + + +++ Y + ++ +LD N M+E+G+ P
Sbjct: 323 -EGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKV 381
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++ +V+ C +E A E M ++PS+ + + + A++++
Sbjct: 382 MFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDS 441
Query: 181 KEDDLCVPNIHTY--NILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLC 236
E + H + N + +F ++D + KG E + + ML H C
Sbjct: 442 FESWIA----HGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAH--C 495
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTW 279
+ A F EM+EKGL P T+ L G ++ D W
Sbjct: 496 RMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAW 539
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 110/252 (43%), Gaps = 11/252 (4%)
Query: 43 NVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQL 102
N+L+ V +L PN + ++++ G E +F+ +L+ Y R +
Sbjct: 135 NLLVMFVSNNPTLIPNVMVNNLVDSSKRF-------GFELTPRAFNYLLNAYIRNKRMDY 187
Query: 103 SLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
++D M ++ + P V +V+ L I++A+E+ +MV GV+ T +
Sbjct: 188 AVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMR 247
Query: 163 EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222
+ A+K++R++ P+ +++ + + M ++ ++G +LG
Sbjct: 248 ASLRERKPEEAVKIFRRVMSRG-AEPDGLLFSLAVQAACKTPDLVMALDLLREMRG-KLG 305
Query: 223 LDL--DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR 280
+ ++YT +I ++ +EA + EM+ G+ + +L G + + L
Sbjct: 306 VPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKAL 365
Query: 281 RLKKKLDEESIT 292
L +++EE +
Sbjct: 366 DLFNRMEEEGLA 377
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 140/270 (51%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ N+ Y ++ CK ++D A L M+ +G+ PNVV+YN ++ G CR+ ++
Sbjct: 426 VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDM--- 482
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A VF +M R ++P+V ++SI++ + + +LD + M I PT
Sbjct: 483 -------ASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDF 535
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ +++ LC G++ +A + L + G PS TYN + + + A+ +YR+M
Sbjct: 536 TFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREM 595
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + PN+ TY LI F NR+D+ + + ++ L LD+ +Y+ LI G C+++
Sbjct: 596 CEFGVS-PNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRD 654
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ A F E++E GL P ++ + ++ G
Sbjct: 655 MESAQDLFFELLEVGLSPNRIVYNSMISGF 684
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 149/327 (45%), Gaps = 46/327 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +I G C+ +DMA +M+ R ++PNVVTY++L++G ++
Sbjct: 461 VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD------ 514
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK + +FD+M I P +F+ +++ + + + DKL E+G P+
Sbjct: 515 SEKAL----DLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 570
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYR----------- 165
TY S+V G I+ A + EM GVSP+ TY N F K R
Sbjct: 571 TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 630
Query: 166 --------------------GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
R+D A L+ ++ E L PN YN +I F LN
Sbjct: 631 REKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLS-PNRIVYNSMISGFRDLNN 689
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
M+ + + + DL +YT LI GL ++ + A ++EM+ KG++P +TF
Sbjct: 690 MEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHV 749
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESIT 292
L GL L R++ +++D +++T
Sbjct: 750 LVNGLCNKGQLENARKILEEMDRKNMT 776
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 138/276 (50%), Gaps = 11/276 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + ++I G CK+ ++ A L +E G P+ +TYN +++G +
Sbjct: 532 PTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIK---------- 581
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I +A V+ EM G+ P+V +++ +++ + ++++ L+L + M+EKG+ V
Sbjct: 582 EGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTA 641
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C +E A++L E++ G+SP+ YN +R + A+ Y++M
Sbjct: 642 YSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI 701
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + ++ TY LI + R+ +++ + + D+ ++ +L++GLC K +
Sbjct: 702 NDRIPC-DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQL 760
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+ A + EM K + P + + TL G + L+
Sbjct: 761 ENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLK 796
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
PNV YTSLI G+CK NRID+A + EM E+G+E +V Y+ L++G C+R
Sbjct: 602 PNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDL 661
Query: 53 ------ASLHPNERFEKTIRNAEKVFDEMRVR----------GIEPDVTSFSIVLHVYSR 96
L PN ++ + + + M I D+ +++ ++ +
Sbjct: 662 FFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLK 721
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D M KGI P + T+ +V LC+ G++E+A ++L EM R ++PS
Sbjct: 722 EGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLI 781
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
YN Y + A L+ +M + L VP+ TY+ILI
Sbjct: 782 YNTLIAGYFREGNLKEAFTLHDEMLDRGL-VPDDVTYDILI 821
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 126/295 (42%), Gaps = 47/295 (15%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
++ K R++ AE + E ERGV+ + Y++++ VC++ PN
Sbjct: 226 MVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK----PNSNL------GL 275
Query: 70 KVFDEMRVRGIEPDVTSF-SIVLHVYSRAH---------------KP------------- 100
++ +EM+ RG P +F S+++ ++ + KP
Sbjct: 276 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 335
Query: 101 --QLSLDK----LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
Q +LD N + E G+ P TY+ +++ C+ G IE A EL +M NG+ PS
Sbjct: 336 CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSV 395
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
N + Y A KL+ + D V NI TYNI++ +MD + +
Sbjct: 396 FNVNSLLRGYLKAPLWEEASKLFDEAV--DCGVANIFTYNIMMSWLCKGGKMDEACSLLD 453
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ + ++ SY +I G C K A F +M+ + L P VT+ L G
Sbjct: 454 NMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDG 508
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 26/277 (9%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA----------- 53
+++ L+ + + NRI+ A MI + V P V N+LL + RR
Sbjct: 151 RVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNK 210
Query: 54 -----------SLHPNERF---EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK 99
++H R E + AE+ F E + RG++ D ++SI++ +
Sbjct: 211 MVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPN 270
Query: 100 PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC 159
L L+ L MKE+G P+ AT+TSV+ + G + +A L EM+ G +
Sbjct: 271 SNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATS 330
Query: 160 FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
K Y + + + A+ L+ ++ ED L PN TY++LI ++ E++ +K +
Sbjct: 331 LMKGYCAQGNLDSALNLFNKITEDGL-FPNKVTYSVLIEGCCNSGNIEKASELYTQMKLN 389
Query: 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
+ + + L+ G + W+EA + F E ++ G+
Sbjct: 390 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV 426
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 103/254 (40%), Gaps = 18/254 (7%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
I+ A+RF E+ R +N LLN R I NA F+ M +
Sbjct: 138 INCAKRFDFELDHR-------VFNYLLNAYIR----------ANRIENAIDCFNAMICQD 180
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
+ P V +I+L R + D N M +GI T +V+ GR+E+AE
Sbjct: 181 VIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAE 240
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
E E GV A Y+ + + ++N ++L +MKE VP+ T+ +I
Sbjct: 241 EYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGW-VPSEATFTSVIVA 299
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+A M + + ++L T L+ G C + A F ++ E GL P
Sbjct: 300 CVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPN 359
Query: 260 KVTFETLYRGLIQS 273
KVT+ L G S
Sbjct: 360 KVTYSVLIEGCCNS 373
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 111/299 (37%), Gaps = 66/299 (22%)
Query: 15 CKINRIDMAERFLGEM-IERGVEPNVVTYNVLLNGVCRRASLHPNER------------- 60
C +N A R+ +RG V Y VLL+ + R H + R
Sbjct: 69 CHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSDP 128
Query: 61 ----FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
F + N K FD E D F+ +L+ Y RA++ + ++D N M + +
Sbjct: 129 SPVVFVDHLINCAKRFD------FELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVI 182
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P V ++ L I + +L +MV G+ Y F
Sbjct: 183 PWVPYMNILLTALVRRNMIGELRDLYNKMVLRGI------YGDHF--------------- 221
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
T ++++ + R++ E + K + LD +Y+++I +C
Sbjct: 222 ---------------TVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVC 266
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI-QSDMLRTWRRLKKKLDEESITFG 294
+K + EM E+G +P + TF ++ + Q +M+ R L EE I G
Sbjct: 267 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALR-----LKEEMINCG 320
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 143/290 (49%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+ LI +C+ R+D+A + MI+ G+ V YN L+NG C+ L
Sbjct: 398 PNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSA---- 453
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE +F EM +G+EP T+F+ ++ Y + + Q + N M + GI P V T
Sbjct: 454 ------AESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYT 507
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ LCS ++ +A EL E+V + P+ TYN + Y + A +L M
Sbjct: 508 FTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMH 567
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L VP+ +TY LI + R+ ++ + + + L+ Y+ L+HG C++ +
Sbjct: 568 QKGL-VPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRL 626
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EA EMI++G+ V L G ++ +T+ L K + ++ +
Sbjct: 627 MEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGL 676
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + L+ G K +ID A + ++ G PN+ YN L+N +C+ L
Sbjct: 328 PTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLD----- 382
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE ++ M + + P+ ++SI++ + R+ + +++ + M + GI TV
Sbjct: 383 -----KAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYA 437
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C G + AE L EM GV P+A T+ Y A KLY +M
Sbjct: 438 YNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMI 497
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + PN++T+ LI + N+M E+++ + ++ +Y +LI G C K
Sbjct: 498 DNGI-TPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKI 556
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+A + +M +KGL+P T+ L GL + + + L ++++
Sbjct: 557 DKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNV 606
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 138/291 (47%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ ++++ C++ A+ + M G + ++VTYNVL++G+C+ +R
Sbjct: 223 PDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCK------GDR- 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +V + +G+ DV ++ ++ + R + + + ++ M E G PT A
Sbjct: 276 ---VSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAA 332
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V L G+I+DA EL+ ++ R G P+ YN D + A LY M
Sbjct: 333 VSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMS 392
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+L PN TY+ILI F R+D+ ++ + +G + +Y LI+G C+
Sbjct: 393 LMNL-RPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDL 451
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A F+EM KG+ P TF +L G + ++ +L K+ + IT
Sbjct: 452 SAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGIT 502
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 142/308 (46%), Gaps = 26/308 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +TSLI G+CK ++ A + +MI+ G+ PNV T+ L++G+C
Sbjct: 468 PTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCS---------- 517
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++FDE+ R I+P ++++++ Y R K + + L M +KG+ P T
Sbjct: 518 TNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYT 577
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LCS GR+ A++ + ++ + V + Y+ Y A+ +M
Sbjct: 578 YRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMI 637
Query: 182 EDDLCVPNIHTYNILIGMFMALNR---MDMVREIWNHVKGSELGLDLDS--YTMLIHGLC 236
+ + + + ++ G +R D+++++ + GL D+ YT +I
Sbjct: 638 QRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQ------GLRPDNVIYTSMIDTYS 691
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESI 291
++ +K+A + + M+ + P VT+ L GL ++ + L K++ SI
Sbjct: 692 KEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSI 751
Query: 292 TFGSEFQN 299
T+G N
Sbjct: 752 TYGCFLDN 759
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 128/271 (47%), Gaps = 16/271 (5%)
Query: 3 NVKM----YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
NVK+ Y++L++G+C+ R+ A EMI+RG+ ++V + VL++G ++
Sbjct: 605 NVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPD---- 660
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
KT + K +M +G+ PD ++ ++ YS+ + + + + M + P
Sbjct: 661 ---RKTFFDLLK---DMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPN 714
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V TYT+++ LC G ++ A L M V P++ TY CF + A+ L+
Sbjct: 715 VVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHH 774
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M + L N T+NI+I F L R ++ + + + + D +Y+ LI+ C
Sbjct: 775 AMLKGLL--ANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRS 832
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + + M+ +GL P V + L G
Sbjct: 833 GNVGASVKLWDTMLNRGLEPDLVAYNLLIYG 863
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YTS+I + K A M+ PNVVTY L+NG+C+ +
Sbjct: 678 PDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMD----- 732
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F M+ + P+ ++ L ++ + ++ L+ KG+ T
Sbjct: 733 -----RAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAI-GLHHAMLKGLLANTVT 786
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C GR +A ++L EM NG+ P TY+ EY + ++KL+ M
Sbjct: 787 HNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTML 846
Query: 182 EDDLCVPNIHTYNILI 197
L P++ YN+LI
Sbjct: 847 NRGL-EPDLVAYNLLI 861
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 24/175 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------- 54
PNV YT+L+ G CK +D A M V PN +TY L+ + + +
Sbjct: 713 PNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGL 772
Query: 55 -------LHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
L N I A KV EM GI PD ++S +++ Y R+
Sbjct: 773 HHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRS 832
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
S+ + M +G+ P + Y ++ C G ++ A EL +M+R G+ P
Sbjct: 833 GNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ N + +I G+CK+ R A + L EM E G+ P+ VTY+ L+ CR +
Sbjct: 781 LANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGN------ 834
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
+ + K++D M RG+EPD+ +++++++ + + + + M +GI P
Sbjct: 835 ----VGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 145/294 (49%), Gaps = 26/294 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------- 51
+PNV Y ++I +CK+ RID A + L M G+EPN++TYN+++NG+CR
Sbjct: 235 LPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSG 294
Query: 52 ------RASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
R P+ T+ N A + EM G+ PDV +++ +++
Sbjct: 295 VLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMC 354
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A +++ + M +G+ P TYTS++ G +++A + EM+R+G P+
Sbjct: 355 KAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIV 414
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN + A+ L R M+ L P++ +Y+ +I F +D ++
Sbjct: 415 TYNALLNGHCVSGRMEEAIGLLRGMEGKGLS-PDVVSYSTIIAGFCRYQELDRAFQMNAE 473
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + D +Y+ LI GLCE+++ EAC F EM+ K LLP + T+ +L G
Sbjct: 474 MVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLING 527
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 16/301 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y LI G+C ++M RF EM PNVVTYN ++ C+
Sbjct: 202 NVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKL---------- 251
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K I A K+ M + G+EP++ ++++V++ R + + + L M KG P TY
Sbjct: 252 KRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTY 311
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++V C G A L EM+RNG+ P TY + N AM+ + QM
Sbjct: 312 NTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHV 371
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L PN TY LI F MD IW+ + S + +Y L++G C + +
Sbjct: 372 RGL-RPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRME 430
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRTWR----RLKKKLDEESITFGSEF 297
EA M KGL P V++ T+ G + ++ R ++ ++K + ++IT+ S
Sbjct: 431 EAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLI 490
Query: 298 Q 298
Q
Sbjct: 491 Q 491
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 136/311 (43%), Gaps = 36/311 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YTSLI G+ + +D A R EMI G P +VTYN LLNG C R
Sbjct: 376 PNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSG------RM 429
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ I + M +G+ PDV S+S ++ + R + + M EKG+ P T
Sbjct: 430 EEAI----GLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAIT 485
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S+++ LC R+ +A +L EM+ + P TY Y D N A+ L+ +M
Sbjct: 486 YSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMI 545
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVRE-------------IWNHVKGSEL-----GL 223
+ +P+ TYN+LI LN+ RE I N + L +
Sbjct: 546 KKGF-LPDTVTYNVLIN---GLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDI 601
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
+ S LI G C K EA Q F MI++ P + + + G + + +L
Sbjct: 602 EFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLY 661
Query: 284 KKLDEESITFG 294
K E + FG
Sbjct: 662 K----EMVDFG 668
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 129/272 (47%), Gaps = 16/272 (5%)
Query: 1 MPNVKMYTSLIYGWCKINR-IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE 59
MP V Y +++ + + + AE+ EMI GV NV +YN+L+ G C +L
Sbjct: 164 MPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGL 223
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
RF F+EM P+V +++ V+ Y + + + L M +G+ P +
Sbjct: 224 RF----------FEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNL 273
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY V+ LC GRIE+ +L EM R G +P TYN Y + + A+ L+ +
Sbjct: 274 LTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSE 333
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN--HVKGSELGLDLDSYTMLIHGLCE 237
M + L P++ TY LI ++ E ++ HV+G L + +YT LI+G +
Sbjct: 334 MLRNGL-PPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG--LRPNGVTYTSLINGFSQ 390
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
K EA + + EMI G P VT+ L G
Sbjct: 391 KGFMDEAYRIWDEMIRSGFPPTIVTYNALLNG 422
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 40/223 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YTSLI G+CK ++ A EMI++G P+ VTYNVL+NG+ ++A +R
Sbjct: 515 LPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKR 574
Query: 61 ------FEKTIRN----------------------------------AEKVFDEMRVRGI 80
++++I N A++VF+ M R
Sbjct: 575 LLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQ 634
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
+P+ +++++H + R + M + G P T ++VK L S G E
Sbjct: 635 KPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNL 694
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ +++R+ AE + + + L +M +D
Sbjct: 695 VIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKD 737
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 144/278 (51%), Gaps = 25/278 (8%)
Query: 3 NVKMYTSLIYGWCK-INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
N K + ++ GWC I A+R EM +R + +VV+Y +++ + +L+
Sbjct: 267 NTKSFNIVLNGWCNVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLY----- 321
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K++++M+ GIEPD ++ V+ ++ +++ + M+EKGI P T
Sbjct: 322 -----KVFKLYNQMKEVGIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVT 376
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++K LC +I++A L EM+++G SP+ TY+ FF+ R ++ ++ R++
Sbjct: 377 YNSLIKPLCRARKIDEARGLFDEMLQHGHSPTIRTYHAFFRSLRTGEEVFALLENMRKLG 436
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P I TY +LI F + D V ++WN + + LG D SY +LIHGL K
Sbjct: 437 ----CHPTIDTYIMLIRKFCRWRQFDDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGKL 492
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 279
+EA +++ +M EK LLP E ML+TW
Sbjct: 493 EEAYKFYADMKEKQLLPDPKLDE----------MLQTW 520
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 15/185 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K+Y S+I+ K + A + M E+G+ PN VTYN L+ +CR
Sbjct: 337 PDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCR---------- 386
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP-QLSLDKLNFMKEKGICPTVA 120
+ I A +FDEM G P + ++ H + R+ + + L M++ G PT+
Sbjct: 387 ARKIDEARGLFDEMLQHGHSPTIRTY----HAFFRSLRTGEEVFALLENMRKLGCHPTID 442
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ C + +D +L ++ NG+ P +Y A K Y M
Sbjct: 443 TYIMLIRKFCRWRQFDDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGKLEEAYKFYADM 502
Query: 181 KEDDL 185
KE L
Sbjct: 503 KEKQL 507
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 143/288 (49%), Gaps = 11/288 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++K YT L+ GW + M + EM++ G++P+VV Y +L++ C+
Sbjct: 281 VPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCD---- 336
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVF EM G P + ++++ + +L K G V
Sbjct: 337 ------EAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVP 390
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +VV C + + A +++ EM ++G+ P++ TY+ + A +++ M
Sbjct: 391 TCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGM 450
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+D C P ++TY +++GMF + R+D+ ++WN +K + + ++ LI+GLC + +
Sbjct: 451 SKDG-CEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALINGLCFENR 509
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+EAC YF EM+++G+ P F L LI+ + + + KLDE
Sbjct: 510 LEEACAYFQEMLDRGIRPPGQLFSNLKEALIEGGRISLAQEMALKLDE 557
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 86/195 (44%), Gaps = 1/195 (0%)
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
R +G SF ++ + + +L + M+ +G+ + T+ +V+ ++
Sbjct: 171 RQQGFVYTADSFHNLIEALGKIKQFRLVWSLVEAMRCRGLL-SKDTFRLIVRRYARARKV 229
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
++A E +M G+ YN K A ++++MK + VP++ TY +
Sbjct: 230 KEAVETFEKMAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTV 289
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
L+ + + M++ ++ + + L D+ +Y MLI C+ K EA + F EM G
Sbjct: 290 LMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNG 349
Query: 256 LLPQKVTFETLYRGL 270
+P + L GL
Sbjct: 350 CMPSPHVYCMLINGL 364
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 139/273 (50%), Gaps = 15/273 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+ +I G CK R D A EM GV P+V++Y L++G CR
Sbjct: 481 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKW------ 534
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A+ +F+EM G++PDVT+FS+++ + + K + + L M ++G P T
Sbjct: 535 ----KDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVT 590
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++VK LC RI +A +L +M + G P TY K + A++L+++M
Sbjct: 591 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 650
Query: 182 EDDLCV-----PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
D P++ +Y+I+I R D RE++ +K + ++ SYT LIHG C
Sbjct: 651 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFC 710
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
K ++A F EM+++G+ VT+ + G
Sbjct: 711 RSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHG 743
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 136/270 (50%), Gaps = 15/270 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y+ +I G CK R D A EM +G+ P+V++Y L++G C ++
Sbjct: 300 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSG------KW 353
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK A+ +F+EM GI+PDVT+ S+++ + + K + L + ++G P V T
Sbjct: 354 EK----AKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVT 409
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T++VK LC RI A +L +M + G P+ T K + A++L++ M
Sbjct: 410 CTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNML 469
Query: 182 EDDL-----CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
D C PN +Y+I+I R D RE++ +K + D+ SYT LIHG C
Sbjct: 470 SDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFC 529
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
KWK+A F EM++ G+ P TF L
Sbjct: 530 RSGKWKDAKYLFNEMVDIGVQPDVTTFSVL 559
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 136/270 (50%), Gaps = 15/270 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y+ +I G CK R D A EM +G+ P+V++Y L++G CR ++
Sbjct: 119 PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSG------KW 172
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK A+ +F+EM GI DVT+ S+++ + + K + + L M ++G + T
Sbjct: 173 EK----AKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVT 228
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++K LC RI +A L M + G P A Y K + N A++L+++M
Sbjct: 229 YSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEML 288
Query: 182 EDD-----LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
D C P + +Y+I+I R D RE++ +K + D+ SYT LIHG C
Sbjct: 289 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFC 348
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
KW++A F EM++ G+ P T L
Sbjct: 349 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVL 378
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 157/339 (46%), Gaps = 52/339 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V YT+LI+G+C + + A+ EM++ G++P+V T +VL++ +C++
Sbjct: 334 MPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK------ 387
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL------HVYSRAHKPQLSLDKLNFMKE-- 112
+ A K+ + + RG PDV + + ++ H S+A + L + KL M
Sbjct: 388 ----VIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVV 443
Query: 113 ------KGIC---------------------------PTVATYTSVVKCLCSCGRIEDAE 139
KG+C P +Y+ ++ LC CGR ++A
Sbjct: 444 TCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAR 503
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
EL EM GV P +Y + A L+ +M + + P++ T+++LI M
Sbjct: 504 ELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV-QPDVTTFSVLIDM 562
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
++ E+ + + +YT L+ GLC + EA Q F++M + G LP
Sbjct: 563 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 622
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
VT+ TL +GL Q+ ++T L KK+ ++ +G+ F+
Sbjct: 623 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFK 661
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 148/325 (45%), Gaps = 32/325 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS-LHPNE 59
MP+V YTSLI+G+C+ + + A+ EM++ G+ +V T ++L++ +C+ + NE
Sbjct: 153 MPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANE 212
Query: 60 RFEKTIR------------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E I+ A ++F M+ G PD ++ ++
Sbjct: 213 LLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLC 272
Query: 96 RAHKP----QLSLDKLNFMKEKGI-C-PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+ QL + LN GI C PT+ +Y+ ++ LC R ++A EL EM G
Sbjct: 273 QTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQG 332
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
+ P +Y + A L+ +M + + P++ T ++LI M ++
Sbjct: 333 IMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGI-QPDVTTSSVLIDMLCKKGKVIEA 391
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ V D+ + T L+ GLC K + +A Q F++M + G +P VT TL +G
Sbjct: 392 NKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKG 451
Query: 270 LIQSDMLRTWRRLKKKLDEESITFG 294
L QS ++ L K + ++ +G
Sbjct: 452 LCQSGNIKIALELHKNMLSDTSPYG 476
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 141/299 (47%), Gaps = 17/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V LI +CK ++ A L M++RG ++VTY+ L+ G+C +
Sbjct: 8 PDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMK--------- 58
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL----DKLNFMKEKGI-C 116
I A ++F M+ G PD ++ ++ + K ++L + LN + GI C
Sbjct: 59 -HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC 117
Query: 117 -PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
PT+ +Y+ ++ LC R ++A EL EM G+ P +Y + A
Sbjct: 118 KPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKC 177
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
L+ +M + + ++ T ++LI + ++ E+ + LD+ +Y+ LI GL
Sbjct: 178 LFNEMLDVGI-RSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL 236
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
C K + EA + F+ M + G P + + TL +GL Q+ + T +L +++ ++ +G
Sbjct: 237 CMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYG 295
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 5/183 (2%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI+PDVT+ +++ ++ + K + + L M ++G + TY++++K LC RI +A
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL-----CVPNIHTY 193
+L M + G P A Y K N A+ L+++M D C P + +Y
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
+I+I R D RE++ +K + D+ SYT LIHG C KW++A F EM++
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184
Query: 254 KGL 256
G+
Sbjct: 185 VGI 187
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 31/169 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YT+L+ G C +RI A + +M + G P+VVTY L+ G+C+ ++
Sbjct: 585 IPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALE 644
Query: 61 FEKTIRN-------------------------------AEKVFDEMRVRGIEPDVTSFSI 89
K + + A ++F EM+ G+ P+V S++
Sbjct: 645 LHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTS 704
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
++H + R+ K + + N M ++G+ TY+ ++ C G+I+ A
Sbjct: 705 LIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M GI P V T ++ C G++ +A ELL MV+ G TY+ K +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV----REIWNHVK--GSELGL 223
+ A +L+ MK+ C P+ Y L+ ++++ +E+ N G +
Sbjct: 61 ISEATQLFMSMKKLG-CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKP 119
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
L SY+++I GLC+ ++ EA + F EM +G++P +++ +L G +S W + K
Sbjct: 120 TLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSG---KWEKAK 176
Query: 284 KKLDE 288
+E
Sbjct: 177 CLFNE 181
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 147/273 (53%), Gaps = 16/273 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K Y+ L+ GW + + + +M++ G +P++VTY ++++ +C
Sbjct: 203 PDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLC----------- 251
Query: 62 EKTIRNAEKVF--DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
KT R E VF +M RG +P +S+++H Y + + ++ M++ GI P V
Sbjct: 252 -KTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDV 310
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y ++V C + ++A ++ +M +G++P++ T+N + + A +++R+
Sbjct: 311 VVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRR 370
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + C P+ TY ++I MF +R++M ++W +++ + + ++++LI+GLC+K
Sbjct: 371 MIKR--CQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKG 428
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ +AC +MIEKG+ P TF L + L++
Sbjct: 429 EVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLK 461
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 127/302 (42%), Gaps = 46/302 (15%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV+ + ++ + + ++D A M + GV PN+ +N LL +C+
Sbjct: 135 NVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCK----------S 184
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K +R A+++F++M R PD ++SI+L + RA + M + G P + TY
Sbjct: 185 KNVRKAQEIFEQMNGR-FSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTY 243
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+V LC GR+E+A ++ +M G P+ Y+ Y A+ + M++
Sbjct: 244 GIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQK 303
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREI---------------WNHVKGSELGL---- 223
D + VP++ YN L+ F + + D + WN + + L
Sbjct: 304 DGI-VPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILNKLISLGKDD 362
Query: 224 ---------------DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
D D+YTM+I CE + + A + + M K LP TF L
Sbjct: 363 EAYRVFRRMIKRCQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLIN 422
Query: 269 GL 270
GL
Sbjct: 423 GL 424
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 92/173 (53%), Gaps = 17/173 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +Y +L+ +CK+ + D A R + +M G+ PN T+N++LN + SL ++
Sbjct: 307 VPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILN---KLISLGKDD- 362
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +VF M ++ +PD ++++++ ++ + +++L +M+ K P++
Sbjct: 363 ------EAYRVFRRM-IKRCQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMH 415
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKD 169
T++ ++ LC G + A LL +M+ G+ P T+ KE GRKD
Sbjct: 416 TFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKE--GRKD 466
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
MR +G+ +V +F I++ Y+RA K ++ N M++ G+ P +A + S++ LC
Sbjct: 128 MRRQGV-VNVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKN 186
Query: 135 IEDAEELLGEMVRNG-VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
+ A+E+ +M NG SP A+TY+ + + + K+Y M D C P+I TY
Sbjct: 187 VRKAQEIFEQM--NGRFSPDAKTYSILLEGWGRAPNLPKMRKVYSDML-DAGCQPDIVTY 243
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
I++ R++ + + Y++L+H + + ++A F++M +
Sbjct: 244 GIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQK 303
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
G++P V + L + R+ ++ IT S N
Sbjct: 304 DGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWN 349
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 143/277 (51%), Gaps = 13/277 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +K +TSL+YGWC+ ++ A+ L ++ E G EP++V YN LL G +
Sbjct: 258 PTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKM------ 311
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A + EMR + EP+V SF+ ++ K + ++ M+ G T
Sbjct: 312 ----VDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVT 367
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G+I ELL M++ G P+ TY + +++ ++L +M+
Sbjct: 368 YTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMR 427
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P+++ YNI+I + L + +WN ++ + L LD++ ++IHG ++
Sbjct: 428 KIG-CTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCL 486
Query: 242 KEACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
EAC++F EM+ +GLL PQ T + L L++++ L
Sbjct: 487 VEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKL 523
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 128/270 (47%), Gaps = 11/270 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+LI C +++ A R EM G + VTY L++G C+
Sbjct: 328 PNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGK------- 380
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I ++ D M +G P+ ++ ++ + + + + ++ + M++ G P +
Sbjct: 381 ---ISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNI 437
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
Y V++ C G I++ + EM G+SP +T+ + ++ A + +++M
Sbjct: 438 YNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMV 497
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L P T L+ + +++M +++W+ + L++ ++T+ IH L
Sbjct: 498 GRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGH 557
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
KEAC Y ++M++ G++PQ TF L RGL
Sbjct: 558 VKEACSYCLDMMDAGVMPQPDTFAKLMRGL 587
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 76/202 (37%), Gaps = 47/202 (23%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y ++ K ++ + EM + G P++ YN+++ C+
Sbjct: 397 IPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGE------ 450
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-------------------------- 94
I+ +V++EM G+ P + +F I++H +
Sbjct: 451 ----IKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQ 506
Query: 95 -----------SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLG 143
RA K ++S D + + KG V +T + L S G +++A
Sbjct: 507 YGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCL 566
Query: 144 EMVRNGVSPSAETYNCFFKEYR 165
+M+ GV P +T+ + R
Sbjct: 567 DMMDAGVMPQPDTFAKLMRGLR 588
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 143/277 (51%), Gaps = 13/277 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +K +TSL+YGWC+ ++ A+ L ++ E G EP++V YN LL G +
Sbjct: 225 PTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKM------ 278
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A + EMR + EP+V SF+ ++ K + ++ M+ G T
Sbjct: 279 ----VDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVT 334
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G+I ELL M++ G P+ TY + +++ ++L +M+
Sbjct: 335 YTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMR 394
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P+++ YNI+I + L + +WN ++ + L LD++ ++IHG ++
Sbjct: 395 KIG-CTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCL 453
Query: 242 KEACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
EAC++F EM+ +GLL PQ T + L L++++ L
Sbjct: 454 VEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKL 490
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 128/270 (47%), Gaps = 11/270 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+LI C +++ A R EM G + VTY L++G C+
Sbjct: 295 PNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGK------- 347
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I ++ D M +G P+ ++ ++ + + + + ++ + M++ G P +
Sbjct: 348 ---ISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNI 404
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
Y V++ C G I++ + EM G+SP +T+ + ++ A + +++M
Sbjct: 405 YNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMV 464
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L P T L+ + +++M +++W+ + L++ ++T+ IH L
Sbjct: 465 GRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGH 524
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
KEAC Y ++M++ G++PQ TF L RGL
Sbjct: 525 VKEACSYCLDMMDAGVMPQPDTFAKLMRGL 554
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 74/194 (38%), Gaps = 47/194 (24%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y ++ K ++ + EM + G P++ YN+++ C+
Sbjct: 364 IPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGE------ 417
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-------------------------- 94
I+ +V++EM G+ P + +F I++H +
Sbjct: 418 ----IKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQ 473
Query: 95 -----------SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLG 143
RA K ++S D + + KG V +T + L S G +++A
Sbjct: 474 YGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCL 533
Query: 144 EMVRNGVSPSAETY 157
+M+ GV P +T+
Sbjct: 534 DMMDAGVMPQPDTF 547
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 139/272 (51%), Gaps = 15/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+LI G CK +D A L EM + G++PN+ TYN ++NG+C+ +
Sbjct: 877 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN------- 929
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A K+ E G+ D +++ ++ Y ++ + + + L M KG+ PT+ T
Sbjct: 930 ---IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVT 986
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C G +ED E+LL M+ G++P+A T+NC K+Y R + A +Y+ M
Sbjct: 987 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMC 1046
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ TY L+ M ++ +KG + + +Y++LI G +++K+
Sbjct: 1047 SRGV-EPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKF 1105
Query: 242 KEACQYFVEMIEKGLLPQKVTF----ETLYRG 269
EA + F +M GL K F +T Y+G
Sbjct: 1106 VEAREIFDQMRRDGLAADKEIFDFFSDTKYKG 1137
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT+L+ G+CK I A +F EM R + P+V+TY +++G C+ +
Sbjct: 771 LPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM----- 825
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+F EM RG+EPD+ +F+ +++ Y +A + + N M + G P V
Sbjct: 826 -----VEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVV 880
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ LC G ++ A ELL EM + G+ P+ TYN + A+KL +
Sbjct: 881 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 940
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L + TY L+ + MD +EI + G L + ++ +L++G C
Sbjct: 941 EAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGM 999
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYR 268
++ + M+ KG+ P TF L +
Sbjct: 1000 LEDGEKLLNWMLAKGIAPNATTFNCLVK 1027
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 137/304 (45%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y S+I C+I ++ AE EMI +G+ P+ + Y L++G C+R
Sbjct: 737 PNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGD------- 789
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
IR A K F EM R I PDV +++ ++ + + + + M +G+ P + T
Sbjct: 790 ---IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIIT 846
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T ++ C G I+DA + M++ G SP+ TY D + A +L +M
Sbjct: 847 FTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 906
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L PNI TYN ++ ++ ++ + + L D +YT L+ C+ +
Sbjct: 907 KIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 965
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGSE 296
+A + EM+ KGL P VTF L G ML + L K + + TF
Sbjct: 966 DKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCL 1025
Query: 297 FQNY 300
+ Y
Sbjct: 1026 VKQY 1029
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 134/299 (44%), Gaps = 11/299 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +T L+ G+CK I A R MI+ G PNVVTY L++G+C+ L
Sbjct: 842 PDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD----- 896
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ EM G++P++ +++ +++ ++ + ++ + + G+ T
Sbjct: 897 -----SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 951
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G ++ A+E+L EM+ G+ P+ T+N + KL M
Sbjct: 952 YTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1011
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN T+N L+ + N + I+ + + D +Y L+ G C +
Sbjct: 1012 AKGIA-PNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNM 1070
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
KEA F EM KG T+ L +G + R + ++ + + E ++
Sbjct: 1071 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDF 1129
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 123/265 (46%), Gaps = 11/265 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N+ A E E GV NV +YN++++ VC+ I A + M +
Sbjct: 648 NKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGR----------INEAHHLLLLMEL 697
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
+G PDV S+S V++ Y R + + MK+KG+ P TY S++ LC ++ +
Sbjct: 698 KGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAE 757
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
AEE EM+ G+ P Y + R D A K + +M D+ P++ TY +I
Sbjct: 758 AEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDI-TPDVLTYTAII 816
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
F + M ++++ + L D+ ++T L++G C+ K+A + MI+ G
Sbjct: 817 SGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCS 876
Query: 258 PQKVTFETLYRGLIQSDMLRTWRRL 282
P VT+ TL GL + L + L
Sbjct: 877 PNVVTYTTLIDGLCKEGDLDSANEL 901
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 139/306 (45%), Gaps = 22/306 (7%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y +I+ C++ RI+ A L M +G P+V++Y+ ++NG CR L
Sbjct: 668 NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELD------ 721
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K+ ++M+ +G++P+ ++ ++ + R K + + + M +GI P Y
Sbjct: 722 ----KVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVY 777
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T++V C G I A + EM ++P TY + D A KL+ +M
Sbjct: 778 TTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM-- 835
Query: 183 DDLC---VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
LC P+I T+ L+ + + + NH+ + ++ +YT LI GLC++
Sbjct: 836 --LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 893
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFG 294
A + EM + GL P T+ ++ GL +S + +L L+ +++T+
Sbjct: 894 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 953
Query: 295 SEFQNY 300
+ Y
Sbjct: 954 TLMDAY 959
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 37/226 (16%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSR-AHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A KVF++M G+ V S ++ L S+ +K ++ E G+C VA+Y V+
Sbjct: 617 ARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVI 676
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+C GRI +A LL M G +P +Y+ Y + + KL +MK+ L
Sbjct: 677 HFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGL- 735
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN +TY +IG+ LC K EA +
Sbjct: 736 KPNSYTYGSIIGL-----------------------------------LCRICKLAEAEE 760
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
F EMI +G+LP + + TL G + +R + ++ IT
Sbjct: 761 AFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDIT 806
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K Y +L+ G C + A EM +G +V TY+VL+ G +R
Sbjct: 1052 PDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKR--------- 1102
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
K A ++FD+MR G+ D F + +P +D ++
Sbjct: 1103 -KKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPID 1148
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 144/304 (47%), Gaps = 15/304 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G C +D A L EM E G+EPNVV Y+ LL G C+ R+
Sbjct: 146 PDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAG------RW 199
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E KVF+EM RGIEPDV ++ ++ R K + + ++ M E+G+ P V T
Sbjct: 200 E----CVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ +C G +++A L M+ GV+ A TYN G + + AM L +M
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315
Query: 182 EDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ V PN+ T+N +I RM ++ + + + +L ++ +LI GL K
Sbjct: 316 HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHK 375
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
K+A + EM GL P T+ L G + + L K+ + I E +
Sbjct: 376 VKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGI----EPELV 431
Query: 301 HFKP 304
H+ P
Sbjct: 432 HYIP 435
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 152/335 (45%), Gaps = 36/335 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
P+V MYT LI C+ ++ A + + +M+ERG+EPNVVTYNVL+N +C+ S+
Sbjct: 216 PDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSL 275
Query: 58 -NERFEKTIR--------------------NAEKVFDEMRVRG---IEPDVTSFSIVLHV 93
N EK + A + +EM + G +EP+V +F+ V+H
Sbjct: 276 RNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM-IHGETMVEPNVVTFNSVIHG 334
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ + + + + M E G + T+ ++ L +++ A EL+ EM +G+ P
Sbjct: 335 LCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPD 394
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
+ TY+ + + A L +M+ D + P + Y L+ M+ R +
Sbjct: 395 SFTYSILINGFCKMWQVDRAESLLSKMRRDGI-EPELVHYIPLLAALCEQGMMEQARNFF 453
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + LD+ +Y+ +IHG C + K A ++ M+++GL+P VT+ L S
Sbjct: 454 DEMH-KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANS 512
Query: 274 DMLRTWRRLKKKLDEESI-----TFGSEFQNYHFK 303
L R+ K++ F S + Y K
Sbjct: 513 GDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAK 547
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 136/306 (44%), Gaps = 16/306 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + S+I+G CK R+ A + M E G N+VT+N+L+ G+ R +H
Sbjct: 323 PNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLR---VH----- 374
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A ++ DEM G+EPD ++SI+++ + + + + L+ M+ GI P +
Sbjct: 375 --KVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVH 432
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G +E A EM +N Y+ +D A + + M
Sbjct: 433 YIPLLAALCEQGMMEQARNFFDEMHKN-CKLDVVAYSTMIHGACRLRDRKSAEEFLKHML 491
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ L +P+ TY++LI MF + + + S D+ + LI G K
Sbjct: 492 DEGL-IPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDT 550
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD----MLRTWRRLKKKLDEESITFGSEF 297
++ + EM K + T+Y L+ ++ +L++ ++ + ++ E
Sbjct: 551 EKVLELIREMTAKDIALDSKIISTIYTCLVANNEGKALLQSVPGFDTEVSKGAVISSHEL 610
Query: 298 QNYHFK 303
N K
Sbjct: 611 TNMLHK 616
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 21/250 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y+ LI G+CK+ ++D AE L +M G+EP +V Y LL +C + + F
Sbjct: 393 PDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNF 452
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
FDEM + + DV ++S ++H R + + + L M ++G+ P T
Sbjct: 453 ----------FDEMH-KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVT 501
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ + G + AE +L +M +G P ++ K Y + D ++L R+M
Sbjct: 502 YSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMT 561
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL----GLDLDSY--TMLIHGL 235
D+ + + I+ ++ L + + + V G + G + S+ T ++H L
Sbjct: 562 AKDIALDS----KIISTIYTCLVANNEGKALLQSVPGFDTEVSKGAVISSHELTNMLHKL 617
Query: 236 CEKQKWKEAC 245
C K + AC
Sbjct: 618 CNKVEPAVAC 627
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 1/183 (0%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
PT +YT++++ LC+ R A LL +M +GV P TY + D + A++L
Sbjct: 111 PTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVEL 170
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
R+M E + PN+ Y+ L+ + R + V +++ + G + D+ YT LI LC
Sbjct: 171 LREMCESGI-EPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLC 229
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSE 296
+ K K+A Q +M+E+GL P VT+ L + + ++ L+ + E+ + +
Sbjct: 230 REGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAV 289
Query: 297 FQN 299
N
Sbjct: 290 TYN 292
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 11/233 (4%)
Query: 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+ V+YN +L +CR+ F + E P S++ ++
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHET----------RPTAVSYTTLMRALCAE 126
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ ++ L M+ G+ P V TY ++++ LC ++ A ELL EM +G+ P+ Y
Sbjct: 127 RRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVY 186
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
+C + Y K++ +M + P++ Y LI ++ ++ + +
Sbjct: 187 SCLLQGYCKAGRWECVSKVFEEMSGRGI-EPDVVMYTGLIDSLCREGKVKKATQVMDKMM 245
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
L ++ +Y +LI+ +C++ KEA M+EKG+ VT+ TL GL
Sbjct: 246 ERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL 298
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 139/273 (50%), Gaps = 15/273 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+ +I G CK R D A EM GV P+V++Y L++G CR
Sbjct: 637 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKW------ 690
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A+ +F+EM G++PDVT+FS+++ + + K + + L M ++G P T
Sbjct: 691 ----KDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVT 746
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++VK LC RI +A +L +M + G P TY K + A++L+++M
Sbjct: 747 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 806
Query: 182 EDDLCV-----PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
D P++ +Y+I+I R D RE++ +K + ++ SYT LIHG C
Sbjct: 807 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFC 866
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
K ++A F EM+++G+ VT+ + G
Sbjct: 867 RSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHG 899
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 135/270 (50%), Gaps = 15/270 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y+ +I G CK R D A EM +G+ P+V++Y L++G C ++
Sbjct: 456 PTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSG------KW 509
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK A+ +F+EM GI+PDVT+ S+++ + + K + L + ++G V T
Sbjct: 510 EK----AKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVT 565
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T++VK LC RI A +L +M + G P+ T K + A++L++ M
Sbjct: 566 CTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNML 625
Query: 182 EDDL-----CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
D C PN +Y+I+I R D RE++ +K + D+ SYT LIHG C
Sbjct: 626 SDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFC 685
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
KWK+A F EM++ G+ P TF L
Sbjct: 686 RSGKWKDAKYLFNEMVDIGVQPDVTTFSVL 715
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 132/269 (49%), Gaps = 8/269 (2%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++ Y++LI G C +RI A + M + G P+ + Y L+ G+C+ ++
Sbjct: 269 DIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLH 328
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ + N + ++ I PDVT+ S+++ + + K + + L M ++G + TY
Sbjct: 329 QEMLNDTSQYG---IKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTY 385
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++++K LC RI +A L M + G P A TY K + N A++L+++M
Sbjct: 386 STLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLN 445
Query: 183 DD-----LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
D C P + +Y+I+I R D RE++ +K + D+ SYT LIHG C
Sbjct: 446 DTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCL 505
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETL 266
KW++A F EM++ G+ P T L
Sbjct: 506 SGKWEKAKCLFNEMLDVGIQPDVTTSSVL 534
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 161/329 (48%), Gaps = 32/329 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS-LHPNE 59
MP+V YT+LI+G+C + + A+ EM++ G++P+V T +VL++ +C++ + N+
Sbjct: 490 MPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANK 549
Query: 60 RFEKTIR------------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E I+ A ++F +M+ G P+V + + ++
Sbjct: 550 LLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLC 609
Query: 96 RAHKPQLSLD----KLNFMKEKGI-C-PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ +++L+ L+ GI C P +Y+ ++ LC CGR ++A EL EM G
Sbjct: 610 QSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALG 669
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
V P +Y + A L+ +M + + P++ T+++LI M ++
Sbjct: 670 VIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV-QPDVTTFSVLIDMLCKEGKVIEA 728
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
E+ + + +YT L+ GLC + EA Q F++M + G LP VT+ TL +G
Sbjct: 729 NELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKG 788
Query: 270 LIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
L Q+ ++T L KK+ ++ +G+ F+
Sbjct: 789 LCQTGNIKTALELHKKMLSDTGQYGTNFK 817
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 149/299 (49%), Gaps = 16/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y+ +I G CK R D A EM +G+ P+V++Y L++G C ++
Sbjct: 163 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSG------KW 216
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK A+ +F+EM GI+PDVT+ +++ ++ + K + + L M +G + T
Sbjct: 217 EK----AKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVT 272
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++K LC RI +A +L M + G P A Y K N A+ L+++M
Sbjct: 273 YSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEML 332
Query: 182 EDDL-----CV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
D C+ P++ T ++LI + ++ E+ + LD+ +Y+ LI GL
Sbjct: 333 NDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL 392
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
C + + EA F+ M + G P +T+ TL +GL Q+ + +L +++ ++ +G
Sbjct: 393 CMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG 451
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 137/299 (45%), Gaps = 17/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + LI CK ++ A L MI+RG ++VTY+ L+ G+C
Sbjct: 52 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC----------M 101
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL----DKLNFMKEKGI-C 116
E I A +F M+ G PD ++ ++ + ++L + LN GI C
Sbjct: 102 EHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKC 161
Query: 117 -PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
PT+ +Y+ ++ LC R ++A EL EM G+ P +Y + A
Sbjct: 162 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKC 221
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
L+ +M + + P++ T +LI MF ++ E+ + LD+ +Y+ LI GL
Sbjct: 222 LFNEMLDVGI-QPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGL 280
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
C K + EA Q F+ M + G P + + TL +GL Q+ + L +++ ++ +G
Sbjct: 281 CMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYG 339
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 6/238 (2%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G+ P+ T+N+L+N +C ++ I + D + I PDVT+ S+++ +
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPD-IVTYSIRPDVTTSSMLIDI 63
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ K + + L M ++G + TY++++K LC RI +A L M + G P
Sbjct: 64 LCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPD 123
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDD-----LCVPNIHTYNILIGMFMALNRMDM 208
A TY K + N A++L+++M D C P + +Y+I+I R D
Sbjct: 124 AITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDE 183
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
RE++ +K + D+ SYT LIHG C KW++A F EM++ G+ P T L
Sbjct: 184 ARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVL 241
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 31/169 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YT+L+ G C +RI A + +M + G P+VVTY L+ G+C+ ++
Sbjct: 741 IPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALE 800
Query: 61 FEKTIRN-------------------------------AEKVFDEMRVRGIEPDVTSFSI 89
K + + A ++F EM+ G+ P+V S++
Sbjct: 801 LHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTS 860
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
++H + R+ K + + N M ++G+ TY+ ++ C G+I+ A
Sbjct: 861 LIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 80/185 (43%), Gaps = 27/185 (14%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M+ G+ P T+ ++ CLC+ R+ + + ++R G P TY+
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIR--------- 51
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
P++ T ++LI + ++ E+ + LD+ +Y+
Sbjct: 52 ------------------PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYS 93
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
LI GLC + + EA F+ M + G P +T+ TL +GL Q+ + +L +++ +
Sbjct: 94 TLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLND 153
Query: 290 SITFG 294
+ +G
Sbjct: 154 TGRYG 158
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 145/277 (52%), Gaps = 16/277 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y +I G CK+ + A + + I +G P++ TYN L++G C++ L
Sbjct: 397 LPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLD---- 452
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A ++ + M +G+ PDV +++ +L+ +A K + ++ M+EKG P +
Sbjct: 453 ------SATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNII 506
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +V LC ++ +A +LLGEM G+ P ++ F + D +GA +L+R+M
Sbjct: 507 TYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566
Query: 181 -KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT--MLIHGLCE 237
K+ D+C TYNI++ F M+M ++++ +K S G D D+YT ++I G C+
Sbjct: 567 EKQYDVC-HTTATYNIIVSAFSEQLNMNMAMKLFSVMKNS--GCDPDNYTYRVVIDGFCK 623
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ ++ +E +EK +P TF + L D
Sbjct: 624 MGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKD 660
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 15/290 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y S+I G+CK + A R L + + +G +P+ TY L+NG C+ P+
Sbjct: 293 PDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGD--PDR-- 348
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A VF + +G+ P + ++ ++ S+ +L +N M E G P + T
Sbjct: 349 ------AMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWT 402
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V+ LC G + DA L+ + + G P TYN Y + + A ++ +M
Sbjct: 403 YNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMW 462
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P++ TYN L+ + + V EI+ ++ ++ +Y +++ LC+ +K
Sbjct: 463 SQGM-TPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKV 521
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKKLD 287
EA EM KGL P V+F TL+ G + + +RR++K+ D
Sbjct: 522 NEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYD 571
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 138/291 (47%), Gaps = 2/291 (0%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + L++ CK + +ER LG++++RGV PN+ T+N+ + G+CR +L R
Sbjct: 214 PDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRN 273
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + AE+ +M G EPD +++ ++ Y + Q + L KG P T
Sbjct: 274 SRVVE-AEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFT 332
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C G + A + + + G+ PS YN K + A++L +M
Sbjct: 333 YCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMA 392
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ C+PNI TYN++I + + + + D+ +Y LI G C++ K
Sbjct: 393 ENG-CLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKL 451
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + M +G+ P +T+ TL GL ++ + K ++E+ T
Sbjct: 452 DSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCT 502
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 123/284 (43%), Gaps = 30/284 (10%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V YT I +CK R A R L M E G + N V Y ++ G+ H + R
Sbjct: 145 DVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGE-HDHAR-- 201
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++FDEM R + PDV +F+ ++HV + S L + ++G+CP + T+
Sbjct: 202 -------ELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTF 254
Query: 123 TSVVKCLCSCG---------RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR---KDA 170
V+ LC G R+ +AEE L +MV G P TYN Y + +DA
Sbjct: 255 NIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDA 314
Query: 171 NGAMK--LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
N +K +++ K D+ TY LI F D ++ G L + Y
Sbjct: 315 NRVLKDAVFKGFKPDEF------TYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLY 368
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
LI GL ++ A Q EM E G LP T+ + GL +
Sbjct: 369 NTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCK 412
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 126/302 (41%), Gaps = 65/302 (21%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+P+V ++N ++N + H A KV+ MR RG++ DV +++I + +
Sbjct: 108 DPSVHSHNAIMN-ILVEFGYH---------NQAHKVYMRMRDRGVQSDVYTYTIRIKSFC 157
Query: 96 RAHKPQLSLDKLNFMKEKG-----------------------------------ICPTVA 120
+ +P +L L M E G +CP V
Sbjct: 158 KTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVV 217
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ +V LC G + ++E LLG++++ GV P+ T+N F + + A++ R +
Sbjct: 218 AFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVV 277
Query: 181 KEDDLC--------VPNIHTYNILI------GMFMALNRMDMVREIWNHVKGSELGLDLD 226
+ ++ P+ TYN +I GM NR+ + ++ K E
Sbjct: 278 EAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRV-LKDAVFKGFKPDEF----- 331
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+Y LI+G C+ A F + + KGL P V + TL +GL Q ++ +L ++
Sbjct: 332 TYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEM 391
Query: 287 DE 288
E
Sbjct: 392 AE 393
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 1/196 (0%)
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Y R K Q ++D M P+V ++ +++ L G A ++ M GV
Sbjct: 86 YGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSD 145
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
TY K + A++L R M E C N Y ++ D RE++
Sbjct: 146 VYTYTIRIKSFCKTARPYAALRLLRNMPELG-CDSNAVAYCTVVAGLYDSGEHDHARELF 204
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + L D+ ++ L+H LC+K E+ + +++++G+ P TF +GL +
Sbjct: 205 DEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCRE 264
Query: 274 DMLRTWRRLKKKLDEE 289
L R + ++ E
Sbjct: 265 GALDRAVRNSRVVEAE 280
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 3/176 (1%)
Query: 100 PQLSLDKLNFMK-EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE-TY 157
P +L+ N K E G T +TY +V+ L G E+ E+LL EM N + E Y
Sbjct: 20 PLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAY 79
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
K Y + A+ + +M + C P++H++N ++ + + + +++ ++
Sbjct: 80 IEAMKNYGRKGKVQEAVDTFERMDFYN-CDPSVHSHNAIMNILVEFGYHNQAHKVYMRMR 138
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ D+ +YT+ I C+ + A + M E G V + T+ GL S
Sbjct: 139 DRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDS 194
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 141/279 (50%), Gaps = 14/279 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT+L++ WC+ R++ AER EM + GV PNV TY +++ + R
Sbjct: 247 PDVVLYTTLVHAWCRSGRLNEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQ------- 299
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++ +M G P+ +F+ ++ + +A + + L N M++ G P + T
Sbjct: 300 ---VPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIIT 356
Query: 122 YTSVVKCLCSCGR--IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++ C G+ ++ A ++L M+ G P T+N K + N A KLY +
Sbjct: 357 YNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYER 416
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+E C PN+ TYN+L+ +F MDMV I + + ++++Y LI C +
Sbjct: 417 MQELQ-CKPNVVTYNLLMRLFNLEKSMDMVLRIKKDMDAQGVEPNVNTYAALIEAFCGRG 475
Query: 240 KWKEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLR 277
WK A EM+ EK L P K ++ + L ++ LR
Sbjct: 476 NWKRAHMTLREMVEEKALKPTKPVYDMVLALLRKAGQLR 514
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 98/258 (37%), Gaps = 38/258 (14%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG------------- 114
A + DEMR R + ++ Y RA P + D M+E G
Sbjct: 163 ARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRMEEYGAGAPDPATLASLL 222
Query: 115 ----------------------ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
P V YT++V C GR+ +AE + EM + GV+P
Sbjct: 223 GALSKKRLASEAQAMFDSYKSVFTPDVVLYTTLVHAWCRSGRLNEAERVFAEMQQAGVTP 282
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
+ TY A +L QM D C PN T+N ++ + R + V ++
Sbjct: 283 NVYTYTAVIDAMYRAGQVPRAQELLCQMI-DSGCPPNTATFNAIMRAHVKAGRSEQVLQV 341
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEK--QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
N ++ D+ +Y L+ C K A + MI KG +P TF + + +
Sbjct: 342 HNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLV 401
Query: 271 IQSDMLRTWRRLKKKLDE 288
+ + R+L +++ E
Sbjct: 402 LVLGNVNAARKLYERMQE 419
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 5/154 (3%)
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
A Y +++ L A LL EM V SA+ + Y + + A L+R+
Sbjct: 145 ALYAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRR 204
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+E P+ T L+G + +++ K S D+ YT L+H C
Sbjct: 205 MEEYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYK-SVFTPDVVLYTTLVHAWCRSG 263
Query: 240 KWKEACQYFVEMIEKGLLPQKVTF----ETLYRG 269
+ EA + F EM + G+ P T+ + +YR
Sbjct: 264 RLNEAERVFAEMQQAGVTPNVYTYTAVIDAMYRA 297
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + ++ + ++ A + M E +PNVVTYN+L+
Sbjct: 388 IPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLF----------N 437
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY------SRAHKPQLSLDKLNFMKEKG 114
EK++ ++ +M +G+EP+V +++ ++ + RAH ++L ++ ++EK
Sbjct: 438 LEKSMDMVLRIKKDMDAQGVEPNVNTYAALIEAFCGRGNWKRAH---MTLREM--VEEKA 492
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+ PT Y V+ L G++ EEL+ MV G
Sbjct: 493 LKPTKPVYDMVLALLRKAGQLRRHEELVEMMVDRG 527
>gi|296090648|emb|CBI41047.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 143/277 (51%), Gaps = 13/277 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +K +TSL+YGWC+ ++ A+ L ++ E G EP++V YN LL G +
Sbjct: 117 PTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKM------ 170
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A + EMR + EP+V SF+ ++ K + ++ M+ G T
Sbjct: 171 ----VDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVT 226
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G+I ELL M++ G P+ TY + +++ ++L +M+
Sbjct: 227 YTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMR 286
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P+++ YNI+I + L + +WN ++ + L LD++ ++IHG ++
Sbjct: 287 KIG-CTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCL 345
Query: 242 KEACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
EAC++F EM+ +GLL PQ T + L L++++ L
Sbjct: 346 VEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKL 382
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 128/270 (47%), Gaps = 11/270 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+LI C +++ A R EM G + VTY L++G C+
Sbjct: 187 PNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGK------- 239
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I ++ D M +G P+ ++ ++ + + + + ++ + M++ G P +
Sbjct: 240 ---ISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNI 296
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
Y V++ C G I++ + EM G+SP +T+ + ++ A + +++M
Sbjct: 297 YNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMV 356
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L P T L+ + +++M +++W+ + L++ ++T+ IH L
Sbjct: 357 GRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGH 416
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
KEAC Y ++M++ G++PQ TF L RGL
Sbjct: 417 VKEACSYCLDMMDAGVMPQPDTFAKLMRGL 446
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 74/194 (38%), Gaps = 47/194 (24%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y ++ K ++ + EM + G P++ YN+++ C+
Sbjct: 256 IPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGE------ 309
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-------------------------- 94
I+ +V++EM G+ P + +F I++H +
Sbjct: 310 ----IKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQ 365
Query: 95 -----------SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLG 143
RA K ++S D + + KG V +T + L S G +++A
Sbjct: 366 YGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCL 425
Query: 144 EMVRNGVSPSAETY 157
+M+ GV P +T+
Sbjct: 426 DMMDAGVMPQPDTF 439
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 141/272 (51%), Gaps = 15/272 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y + GWC I R A L EM+ERG+ P + TYN+LL G R L
Sbjct: 216 DVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQL------- 268
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A + F +M+ R +E DV +++ ++H + + + + N M +GI P+ ATY
Sbjct: 269 ---KEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATY 325
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++++ LC +E+A + EMV+ G P+ TYN + + + AM+ +MK
Sbjct: 326 NAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKT 385
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D C PN+ TYN+ I F ++ ++ + L +LD+Y +LI + ++K +
Sbjct: 386 DG-CEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQGSLP-NLDTYNVLISAMFVRKKSE 443
Query: 243 E---ACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ A + +EM+++G +P+K TF + GL+
Sbjct: 444 DLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLL 475
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A KVF MR G D+ SF+ +L + ++ + +++ + L + V +Y +
Sbjct: 166 AIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIAN 225
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
C R A E+L EMV G++P+ TYN K Y A + + QMKE ++ +
Sbjct: 226 GWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEI 285
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
++ TY ++ F + + R+++N + G + +Y +I LC+K + A
Sbjct: 286 -DVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLM 344
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQS 273
F EM++KG +P T+ + RGL +
Sbjct: 345 FEEMVKKGYVPNLTTYNVVIRGLFHA 370
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
MR R I P +F+I+ + A KP ++ M+E G + ++ +++ LC R
Sbjct: 138 MRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKR 197
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+E A L +++R +YN + K A+++ ++M E L P I TYN
Sbjct: 198 VEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLT-PTITTYN 256
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
IL+ + ++ E + +K E+ +D+ +YT ++HG + K A + F EM+ +
Sbjct: 257 ILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGE 316
Query: 255 GLLPQKVTFETLYRGLIQSD 274
G+LP T+ + + L + D
Sbjct: 317 GILPSTATYNAMIQVLCKKD 336
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I CK + ++ A EM+++G PN+ TYNV++ G+ ++
Sbjct: 319 LPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMD---- 374
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + + M+ G EP+V ++++ + + A + L M + G P +
Sbjct: 375 ------KAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQ-GSLPNLD 427
Query: 121 TYTSVVKCLCSCGRIED---AEELLGEMVRNGVSPSAETYN 158
TY ++ + + ED A +LL EMV G P T+N
Sbjct: 428 TYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFN 468
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDK------------LNFMKEKGICPTVA-TYTSVV 126
+E D S LH P+L +DK L F K P+ A + +S
Sbjct: 58 LESDPKSLRGSLHGLQLQFTPEL-VDKVLKRLWFHGPKALQFFKHLEYHPSYAHSASSFD 116
Query: 127 KCLCSCGRIEDAE---ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
+ GR+ D + L+ M + PS++T+ + + + A+K++ M+E
Sbjct: 117 HAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREH 176
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
C ++H++N ++ + R++M V + D+ SY ++ +G C ++ +
Sbjct: 177 G-CPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPK 235
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
A + EM+E+GL P T+ L +G ++ L+
Sbjct: 236 ALEVLKEMVERGLTPTITTYNILLKGYFRAGQLK 269
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 137/264 (51%), Gaps = 14/264 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +I G CK+ + A +G+ I +G P++ TYN L++G CR+ L
Sbjct: 503 PDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLD----- 557
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ + M +G+ PDV +++ +L+ + K + ++ M EKG P + T
Sbjct: 558 -----SAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIIT 612
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ LC+ ++ +A +LLGEM G++P ++ + D +GA L+R M+
Sbjct: 613 YNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGME 672
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT--MLIHGLCEKQ 239
+ TYNI+I F M M +++ +K + G D D+YT +LI G C+
Sbjct: 673 KQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKN--GCDPDNYTYRVLIDGFCKTG 730
Query: 240 KWKEACQYFVEMIEKGLLPQKVTF 263
+ ++ +E IEKG +P TF
Sbjct: 731 NVNQGYKFLLENIEKGFIPSLTTF 754
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 143/307 (46%), Gaps = 32/307 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G C+ +R+ AE L +M+ G EPN TYN +++G C++
Sbjct: 363 PDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKG-------- 414
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A ++ + +G +PD ++ +++ + + P ++ KG+ P++
Sbjct: 415 --MVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIV 472
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K LC G I A +L+ EM G P TYN NG K+
Sbjct: 473 YNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLII---------NGLCKMGCLSD 523
Query: 182 EDDL--------CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
+ L C+P+I TYN L+ + ++D E+ N + + D+ +Y L++
Sbjct: 524 ANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLN 583
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDE 288
GLC+ K +E + F M EKG P +T+ T+ L S + L K L
Sbjct: 584 GLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTP 643
Query: 289 ESITFGS 295
+ ++FG+
Sbjct: 644 DVVSFGT 650
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 150/297 (50%), Gaps = 25/297 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y +L+ G+C+ ++D A + M +G+ P+V+TYN LLNG+C+ A +
Sbjct: 537 IPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTA------K 590
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ + ++F M +G P++ +++ ++ + K ++D L MK KG+ P V
Sbjct: 591 SEEVM----EIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVV 646
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
++ +++ C G ++ A L M + VS + TYN + + + A++L+ +
Sbjct: 647 SFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSE 706
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCE 237
MK++ C P+ +TY +LI F ++ + ++ E G L ++ +++ LC
Sbjct: 707 MKKNG-CDPDNYTYRVLIDGFCKTGNVNQGYKFL--LENIEKGFIPSLTTFGRVLNCLCV 763
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVT--FETLYRGLIQ-------SDMLRTWRRLKKK 285
+ K +EA M++K ++P V FE +G I D +R + LKKK
Sbjct: 764 EHKVQEAVGIIHLMVQKDIVPDTVNTIFEADKKGHITYHAYEFLYDGVRDKKILKKK 820
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 130/291 (44%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + L++ CK + +ER ++++RGV PN+ T+N+ + G+C+ SL
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLD----- 347
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ + G+ PDV +++ V+ R + + + L+ M G P T
Sbjct: 348 -----RAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFT 402
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C G + DA +L + V G P TY + D + AM +++
Sbjct: 403 YNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGL 462
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I YN LI + ++ N + D+ +Y ++I+GLC+
Sbjct: 463 GKGL-RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCL 521
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A + I KG +P T+ TL G + L + L ++ + +T
Sbjct: 522 SDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMT 572
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 129/285 (45%), Gaps = 21/285 (7%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y +++ G+ + D A EM+E + P+V T+N L++ +C++ + +ER
Sbjct: 259 NAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESER-- 316
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+FD++ RG+ P++ +F+I + + ++ L + +G+ P V TY
Sbjct: 317 --------LFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTY 368
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK---DANGAMK--LY 177
+V+ LC R+ +AEE L +MV G P+ TYN Y + DAN +K ++
Sbjct: 369 NTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVF 428
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+ K D+ TY L+ F D ++ G L + Y LI GLC+
Sbjct: 429 KGFKPDEF------TYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQ 482
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ A Q EM EKG P T+ + GL + L L
Sbjct: 483 QGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHL 527
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 134/320 (41%), Gaps = 38/320 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ + + A + M ++ VE +V TY + + CR + R
Sbjct: 188 PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRL 247
Query: 62 EKTI-------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ + A ++FDEM + PDVT+F+ ++H +
Sbjct: 248 LRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCK 307
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
S + + ++G+CP + T+ ++ LC G ++ A LLG + R G+ P T
Sbjct: 308 KGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVT 367
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI------GMFMALNRMDMVR 210
YN + A + +M PN TYN +I GM + NR+ +
Sbjct: 368 YNTVICGLCRKSRVVEAEECLHKMVNGGF-EPNDFTYNSIIDGYCKKGMVVDANRI-LKD 425
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ K E +Y L++G C+ +A F + + KGL P + + TL +GL
Sbjct: 426 AVFKGFKPDEF-----TYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGL 480
Query: 271 IQSDMLRTWRRLKKKLDEES 290
Q ++ +L ++ E+
Sbjct: 481 CQQGLILPALQLMNEMAEKG 500
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 11/249 (4%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+P+V +YN ++N + + A KV+ M+ + +E DV +++I + +
Sbjct: 187 DPSVYSYNAIMNILVEFGYFN----------QAHKVYMRMKDKKVESDVYTYTIRIKSFC 236
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
R +P +L L M G Y +VV G + A EL EM+ + P
Sbjct: 237 RTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVT 296
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
T+N + + +L+ ++ + +C PN+ T+NI I +D +
Sbjct: 297 TFNKLVHALCKKGFVLESERLFDKVLKRGVC-PNLFTFNIFIQGLCKEGSLDRAVRLLGC 355
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
V L D+ +Y +I GLC K + EA + +M+ G P T+ ++ G + M
Sbjct: 356 VSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGM 415
Query: 276 LRTWRRLKK 284
+ R+ K
Sbjct: 416 VVDANRILK 424
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 103/260 (39%), Gaps = 10/260 (3%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
++G + + TY +L + + E +R+ D + G+ + F
Sbjct: 112 KQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSN---LDNTLLEGVYVEAMRF---- 164
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
Y R K Q ++D M P+V +Y +++ L G A ++ M V
Sbjct: 165 --YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVE 222
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
TY K + A++L R M C N Y ++ F D RE
Sbjct: 223 SDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLG-CFSNAVAYCTVVTGFYEFGDNDRARE 281
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+++ + L D+ ++ L+H LC+K E+ + F +++++G+ P TF +GL
Sbjct: 282 LFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLC 341
Query: 272 QSDMLRTWRRLKKKLDEESI 291
+ L RL + E +
Sbjct: 342 KEGSLDRAVRLLGCVSREGL 361
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 144/291 (49%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ NV Y SL+ CK ++ A +M+ +GV P+VV+YN ++ G C++ +
Sbjct: 430 IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMD---- 485
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A VF EM +G++P++ ++S+++ Y + + + + M+ + I P+
Sbjct: 486 ------SANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDF 539
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T ++ LC GR ++++ L ++V+ G P+ TYNC + N A+ +Y +M
Sbjct: 540 TCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEM 599
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + PN+ TY LI F N MD+ ++ + +K + LD+ Y LI G C K
Sbjct: 600 CKIGVS-PNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGD 658
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A Q E+ E GL P KV + ++ G + + L K++ E I
Sbjct: 659 MVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGI 709
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 143/325 (44%), Gaps = 44/325 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G C+ +D A EM+E+G++PN++TY+VL++G ++
Sbjct: 466 PSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGD------- 518
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++D MR I P + +I+++ +A + S D+L + ++G PT T
Sbjct: 519 ---TEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMT 575
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ G + A + EM + GVSP+ TY + + + A+K+ +MK
Sbjct: 576 YNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMK 635
Query: 182 E--------------DDLC--------------------VPNIHTYNILIGMFMALNRMD 207
D C PN Y+ +I F L M+
Sbjct: 636 NKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNME 695
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ + + DL YT LI GL ++ K A + + EM+ KG++P +T+ L
Sbjct: 696 AALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLI 755
Query: 268 RGLIQSDMLRTWRRLKKKLDEESIT 292
GL L +++ + +D + +T
Sbjct: 756 HGLCNKGQLENAQKILEDMDRKCMT 780
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 139/277 (50%), Gaps = 11/277 (3%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
+I G CK R ++ L ++++ G P +TYN +++G + E ++ +A
Sbjct: 544 IINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVK----------EGSVNSAL 593
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
V+ EM G+ P+V +++ +++ + +++ L+L ++ MK KGI V Y +++
Sbjct: 594 AVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGF 653
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C G + +A +LL E+ G+SP+ Y+ +R ++ A+ L+++M + + +
Sbjct: 654 CRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPC-D 712
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+ Y LI + ++ E++ + + DL +Y++LIHGLC K + + A +
Sbjct: 713 LQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILE 772
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+M K + P + TL G + L+ RL ++
Sbjct: 773 DMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEM 809
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 46/231 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+LI G+CK N +D+A + + EM +G+E +V Y L++G CR+ +
Sbjct: 606 PNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDM------ 659
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFS-------------IVLHVYSRAHKPQLSLD--- 105
NA ++ E++ G+ P+ +S LH++ R + D
Sbjct: 660 ----VNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQI 715
Query: 106 ------------KLNFMKE-------KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
KL F E KGI P + TY+ ++ LC+ G++E+A+++L +M
Sbjct: 716 YTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMD 775
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
R ++P+ YN + + A +L+ +M + L VP+ TY+IL+
Sbjct: 776 RKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGL-VPDDTTYDILV 825
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 14/268 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ + Y+ +I CK A L EM ++G P+ V + ++ GVC + +
Sbjct: 258 DARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVI-GVCMK---------Q 307
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A KV EM G +V + ++ Y + +L+ + M E GICP TY
Sbjct: 308 GKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTY 367
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C G ++ A E+ +M +SP+ N + Y + A KL+ E
Sbjct: 368 AVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLF---DE 424
Query: 183 DDLC-VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C + N+ TYN L+ +M IW + + + SY +I G C++
Sbjct: 425 AVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDM 484
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
A FVEM+EKGL P +T+ L G
Sbjct: 485 DSANGVFVEMLEKGLKPNLITYSVLMDG 512
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 139/297 (46%), Gaps = 27/297 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-E 59
+P+ ++T +I K ++ A + GEM+ G NVV L+ G C++ L E
Sbjct: 291 VPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALE 350
Query: 60 RFEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
F+K N A +++++M+ + I P V + + ++ Y
Sbjct: 351 LFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYL 410
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A P+ + + GI V TY S++ LC G++ +A + +MVR GV PS
Sbjct: 411 KARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVV 469
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+YN + + D + A ++ +M E L PN+ TY++L+ + + +++
Sbjct: 470 SYNNMILGHCQQGDMDSANGVFVEMLEKGL-KPNLITYSVLMDGYFKKGDTEYAFGLYDR 528
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++G + + ++I+GLC+ + E+ +++++G +P +T+ + G ++
Sbjct: 529 MRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVK 585
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 126/291 (43%), Gaps = 45/291 (15%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75
K N I A +M +GV+ + T +V++ RAS+ E + AE F E
Sbjct: 201 KNNMIREARDVYNKMASKGVKGDCATISVMI-----RASMR-----EGKLEEAEGWFREA 250
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
+ +G+E D ++SIV+ + +L L M++KG P +T V+ G++
Sbjct: 251 KNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKM 310
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
+A ++ GEM+ G + K Y + D + A++L+ +M E+ +C PN TY +
Sbjct: 311 LEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGIC-PNNVTYAV 369
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELG--------------------------------- 222
+I MD EI+N +K ++
Sbjct: 370 IIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG 429
Query: 223 -LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++ +Y L+ LC++ K EAC + +M+ KG+ P V++ + G Q
Sbjct: 430 IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQ 480
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K I +A F+ + + I P +T +I L + + + + D N M KG+ AT
Sbjct: 168 KRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATI 227
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ +++ G++E+AE E GV A Y+ + + D+ A+ L R+M+
Sbjct: 228 SVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMR- 286
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D VP+ + +IG+ M +M ++ + +++ T L+ G C++
Sbjct: 287 DKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLD 346
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
A + F +M E G+ P VT+ +
Sbjct: 347 SALELFDKMNENGICPNNVTYAVI 370
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL 55
P V +Y +LI G K + A R EM+++G+ P+ TY++L+NG + +L
Sbjct: 781 PTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 145/290 (50%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y ++I G+CKI + +A L +M + G P++V YN +++G+C+
Sbjct: 187 PNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCK---------- 236
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A +F E++ +G+ PDV ++SI++H + + + + N M I P V T
Sbjct: 237 DRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVT 296
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V LC G + +A+ ++ M+ GV P+ TYN Y + A ++ M
Sbjct: 297 FNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMI 356
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C+PN+ +YNILI + R+D RE+++ + L + +Y LI GLC+ +
Sbjct: 357 TKG-CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EA + F +M +G P VT L L + L RL + + + +
Sbjct: 416 CEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCL 465
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 142/324 (43%), Gaps = 44/324 (13%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V + LI + ++ R+D A LG++I+ G EP+ VT++ L+NG+C FE
Sbjct: 118 DVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLC----------FE 167
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A + FDEM G +P++ +++ ++ + + K +++ L M + G P + Y
Sbjct: 168 DKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIY 227
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC + +A ++ E+ GV P TY+ A L+ +M
Sbjct: 228 NTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMS 287
Query: 183 --------------DDLCV--------------------PNIHTYNILIGMFMALNRMDM 208
D LC PN TYN L+ + N++
Sbjct: 288 LNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFE 347
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
R +++ + ++ SY +LI+G C+ Q+ EA + F EM +GL+P + TL
Sbjct: 348 ARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLIS 407
Query: 269 GLIQSDMLRTWRRLKKKLDEESIT 292
GL Q+ R L K + + +
Sbjct: 408 GLCQAGRHCEARELFKDMQAQGCS 431
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V + L+ CK + A+ + MIE+GVEPN TYN L+NG C + N+
Sbjct: 291 MPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQ-----NKV 345
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
FE A VFD M +G P+V S++I+++ Y +A + + + + M +G+ P
Sbjct: 346 FE-----ARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTF 400
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ LC GR +A EL +M G SP T + A++L+R M
Sbjct: 401 NYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAM 460
Query: 181 KEDDLCVPNIHTYNILI 197
+D PN+ TY+ILI
Sbjct: 461 -QDSCLKPNLVTYDILI 476
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 11/277 (3%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
C + I+ A MI + P +V ++ LL+ + R + T+ + K +
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRI-------KHYGTVLSLSKRIEL 112
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
+R IE DV F+I+++ +SR + + L + + G P T++S++ LC +
Sbjct: 113 LR---IERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDK 169
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
A E EMV +G P+ TYN K + A+ L ++M + P+I YN
Sbjct: 170 FARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAG-GRPDIVIYN 228
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
+I + +I++ +KG + D+ +Y++L+HGLC + +EA F EM+
Sbjct: 229 TIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSL 288
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++P VTF L L + ML + + K + E+ +
Sbjct: 289 NIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGV 325
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 10/161 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y SL+ G+C N++ A MI +G PNVV+YN+L+NG C+
Sbjct: 327 PNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCK---------- 376
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I A ++FDEM RG+ P+ +++ ++ +A + + + M+ +G P + T
Sbjct: 377 AQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVT 436
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
T ++ LC G +++A L M + + P+ TY+ +
Sbjct: 437 CTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIR 477
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV Y LI G+CK RID A EM RG+ PN YN L++G+C +A H R
Sbjct: 361 MPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLC-QAGRHCEAR 419
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++F +M+ +G PD+ + +I+L + +L M++ + P +
Sbjct: 420 ---------ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLV 470
Query: 121 TYTSVVKCLCSCGRI 135
TY +++ + G+I
Sbjct: 471 TYDILIRAMYKSGKI 485
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 27/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y S+I G+C R AE+ L EM+ER + P+VVTYN L+N + F
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF-----F 342
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AE+++DEM RGI P+ ++S ++ + + ++ + M KG P + T
Sbjct: 343 E-----AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C RI+D ELL EM G+ TYN + D N A+ L ++M
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-----------DLDSYTM 230
LC P+I T + L+ ++ E++ ++ S+ L D+ +Y +
Sbjct: 458 SSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
LI GL + K+ EA + + EM +G++P +T+ ++ GL + L ++ + +S
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576
Query: 291 -----ITFGSEFQNY 300
+TF + Y
Sbjct: 577 FSPNVVTFTTLINGY 591
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 136/281 (48%), Gaps = 22/281 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y+S+I G+CK NR+D AE M +G PN++T+N L++G C
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG--------- 407
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K I + ++ EM G+ D T+++ ++H + +LD L M G+CP +
Sbjct: 408 -AKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVR-----------NGVSPSAETYNCFFKEYRGRKD 169
T +++ LC G+++DA E+ M + NGV P +TYN
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A +LY +M + VP+ TY+ +I +R+D ++++ + ++ ++T
Sbjct: 527 FLEAEELYEEMPHRGI-VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 585
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
LI+G C+ + + + F EM +G++ +T+ TL G
Sbjct: 586 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 10/269 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+L+ G C+ RI A L M+E G++P +TY +++G+C++
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD------- 234
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
T+ + V I P+V +S ++ + + + + M+EKGI P + T
Sbjct: 235 --TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ CS GR DAE+LL EM+ +SP TYN + A +LY +M
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PN TY+ +I F NR+D ++ + +L ++ LI G C ++
Sbjct: 353 PRGI-IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + EM E GL+ T+ TL G
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGF 440
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 125/272 (45%), Gaps = 10/272 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + L+ ++ R D+ +M + + ++ ++ +L+ C + L
Sbjct: 76 LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLP---- 131
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A F ++ G+ PDV +F+ +LH + +L+ + M E P V
Sbjct: 132 ------FALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVV 185
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T+++ LC GRI +A LL M+ +G+ P+ TY + D A+ L R+M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+E +PN+ Y+ +I R + ++ ++ + DL +Y +I G C +
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
W +A Q EM+E+ + P VT+ L ++
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVK 337
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 36/236 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+ + Y +LI+G+ + ++ A L EMI G+ P++VT + LL+G+C L
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 56 ---------------HPNERFEKTIRN----------------AEKVFDEMRVRGIEPDV 84
HP E ++ AE++++EM RGI PD
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++S ++ + + + + M K P V T+T+++ C GR++D EL E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
M R G+ +A TY +R + NGA+ ++++M + I N+L G++
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 36/228 (15%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + +A +F +M P V F ++ V R +P L + M+ K I + ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++KC CSC ++ A G++ + G+ P T+N + A+ L+ QM E
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C PN+ T +T L++GLC + +
Sbjct: 178 TT-CRPNVVT-----------------------------------FTTLMNGLCREGRIV 201
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
EA M+E GL P ++T+ T+ G+ + + L +K++E S
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 140/272 (51%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + +LI+G N+ A + M+ +G +P++VTY V++NG+C+R
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL---- 239
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M +EP V ++ ++ + +L+ M+ KGI P V T
Sbjct: 240 ------AFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVT 293
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLC+ GR DA LL +M+ ++P T++ + A KLY +M
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TY+ LI F +R+D ++++ + D+ SY+ LI G C+ ++
Sbjct: 354 KRSI-DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRV 412
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
E + F EM ++GL+ VT+ TL +GL Q+
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIQGLFQA 444
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 142/288 (49%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI C R A R L +MIER + P+V T++ L++ +
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK---------- 338
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK++DEM R I+P + ++S +++ + + + FM K P V +
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVS 398
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++K C R+++ EL EM + G+ + TY + D + A +++++M
Sbjct: 399 YSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMV 458
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + PNI TYN L+ +++ ++ +++ S++ + +Y ++I G+C+ K
Sbjct: 459 SDGV-PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++ F + KG+ P V + T+ G + L K++ E+
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 140/268 (52%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +++LI + K ++ AE+ EM++R ++P++VTY+ L+NG C +H +R
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC----MH--DRL 377
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A+++F+ M + PDV S+S ++ + +A + ++ M ++G+ T
Sbjct: 378 DE----AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++++ L G + A+E+ EMV +GV P+ TYN AM ++ ++
Sbjct: 434 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P I+TYNI+I +++ +++ ++ + D+ +Y +I G C K
Sbjct: 494 RSKM-EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
+EA F EM E G LP + TL R
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 137/283 (48%), Gaps = 12/283 (4%)
Query: 1 MP-NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE 59
MP N Y+ LI +C+ +++ +A LG+M++ G EPN+VT + LLNG C
Sbjct: 112 MPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH-------- 163
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
K I A + D+M V G +P+ +F+ ++H +K ++ ++ M KG P +
Sbjct: 164 --SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDL 221
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY VV LC G + A LL +M + + P Y K + A+ L+++
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKE 281
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ + PN+ TY+ LI R + + + ++ D+ +++ LI ++
Sbjct: 282 METKGI-RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
K EA + + EM+++ + P VT+ +L G D L +++
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N YT+LI G + DMA+ EM+ GV PN++TYN LL+G+C+ N + E
Sbjct: 430 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK------NGKLE 483
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K A VF+ ++ +EP + +++I++ +A K + D + KG+ P V Y
Sbjct: 484 K----AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C G E+A+ L EM +G P++ YN + D + +L ++M+
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 132/282 (46%), Gaps = 16/282 (5%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
++D A GEM++ P+++ ++ LL+ + + +F+ I E +M+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKM------NKFDVVISLGE----QMQNL 110
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G+ + ++SI+++ + R + L+L L M + G P + T +S++ C RI +A
Sbjct: 111 GMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ +M G P+ T+N A+ A+ L +M C P++ TY +++
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKG-CQPDLVTYGVVVN 229
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
D+ + N ++ +L + YT +I GLC+ + +A F EM KG+ P
Sbjct: 230 GLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRP 289
Query: 259 QKVTFETLYRGLIQ----SDMLRTWRRL-KKKLDEESITFGS 295
VT+ +L L SD R + ++K++ + TF +
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G+C+ + A+ EM E G PN YN L+ RA L +R
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI-----RARLRDGDR- 587
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
+ ++ EMR G D ++ +V ++ + LD L+
Sbjct: 588 ----EASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 630
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 27/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y S+I G+C R AE+ L EM+ER + P+VVTYN L+N + F
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF-----F 342
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AE+++DEM RGI P+ ++S ++ + + ++ + M KG P + T
Sbjct: 343 E-----AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C RI+D ELL EM G+ TYN + D N A+ L ++M
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-----------DLDSYTM 230
LC P+I T + L+ ++ E++ ++ S+ L D+ +Y +
Sbjct: 458 SSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
LI GL + K+ EA + + EM +G++P +T+ ++ GL + L ++ + +S
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576
Query: 291 -----ITFGSEFQNY 300
+TF + Y
Sbjct: 577 FSPNVVTFTTLINGY 591
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 136/281 (48%), Gaps = 22/281 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y+S+I G+CK NR+D AE M +G PN++T+N L++G C
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG--------- 407
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K I + ++ EM G+ D T+++ ++H + +LD L M G+CP +
Sbjct: 408 -AKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVR-----------NGVSPSAETYNCFFKEYRGRKD 169
T +++ LC G+++DA E+ M + NGV P +TYN
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A +LY +M + VP+ TY+ +I +R+D ++++ + ++ ++T
Sbjct: 527 FLEAEELYEEMPHRGI-VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 585
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
LI+G C+ + + + F EM +G++ +T+ TL G
Sbjct: 586 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 10/269 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+L+ G C+ RI A L M+E G++P +TY +++G+C++
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD------- 234
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
T+ + V I P+V +S ++ + + + + M+EKGI P + T
Sbjct: 235 --TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ CS GR DAE+LL EM+ +SP TYN + A +LY +M
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PN TY+ +I F NR+D ++ + +L ++ LI G C ++
Sbjct: 353 PRGI-IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + EM E GL+ T+ TL G
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGF 440
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 126/272 (46%), Gaps = 10/272 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + L+ ++ R D+ +M + + ++ ++N+L+ C + L
Sbjct: 76 LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLP---- 131
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A F ++ G+ PDV +F+ +LH + +L+ + M E P V
Sbjct: 132 ------FALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVV 185
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T+++ LC GRI +A LL M+ +G+ P+ TY + D A+ L R+M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+E +PN+ Y+ +I R + ++ ++ + DL +Y +I G C +
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
W +A Q EM+E+ + P VT+ L ++
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVK 337
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 36/236 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+ + Y +LI+G+ + ++ A L EMI G+ P++VT + LL+G+C L
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 56 ---------------HPNERFEKTIRN----------------AEKVFDEMRVRGIEPDV 84
HP E ++ AE++++EM RGI PD
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++S ++ + + + + M K P V T+T+++ C GR++D EL E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
M R G+ +A TY +R + NGA+ ++++M + I N+L G++
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 36/228 (15%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + +A +F +M P V F ++ V R +P L + M+ K I + ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++KC CSC ++ A G++ + G+ P T+ + A+ L+ QM E
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C PN+ T +T L++GLC + +
Sbjct: 178 TT-CRPNVVT-----------------------------------FTTLMNGLCREGRIV 201
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
EA M+E GL P ++T+ T+ G+ + + L +K++E S
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 27/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y S+I G+C R AE+ L EM+ER + P+VVTYN L+N + F
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF-----F 342
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AE+++DEM RGI P+ ++S ++ + + ++ + M KG P + T
Sbjct: 343 E-----AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C RI+D ELL EM G+ TYN + D N A+ L ++M
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-----------DLDSYTM 230
LC P+I T + L+ ++ E++ ++ S+ L D+ +Y +
Sbjct: 458 SSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
LI GL + K+ EA + + EM +G++P +T+ ++ GL + L ++ + +S
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576
Query: 291 -----ITFGSEFQNY 300
+TF + Y
Sbjct: 577 FSPNVVTFTTLINGY 591
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 136/281 (48%), Gaps = 22/281 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y+S+I G+CK NR+D AE M +G PN++T+N L++G C
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG--------- 407
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K I + ++ EM G+ D T+++ ++H + +LD L M G+CP +
Sbjct: 408 -AKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVR-----------NGVSPSAETYNCFFKEYRGRKD 169
T +++ LC G+++DA E+ M + NGV P +TYN
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A +LY +M + VP+ TY+ +I +R+D ++++ + ++ ++T
Sbjct: 527 FLEAEELYEEMPHRGI-VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 585
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
LI+G C+ + + + F EM +G++ +T+ TL G
Sbjct: 586 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 10/269 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+L+ G C+ RI A L M+E G++P +TY +++G+C++
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD------- 234
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
T+ + V I P+V +S ++ + + + + M+EKGI P + T
Sbjct: 235 --TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ CS GR DAE+LL EM+ +SP TYN + A +LY +M
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PN TY+ +I F NR+D ++ + +L ++ LI G C ++
Sbjct: 353 PRGI-IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + EM E GL+ T+ TL G
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGF 440
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 10/272 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + L+ ++ R D+ +M + + ++ ++N+L+ C + L
Sbjct: 76 LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLP---- 131
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A F ++ G+ PDV +F+ +LH + +LD + M E P V
Sbjct: 132 ------FALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVV 185
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T+++ LC GRI +A LL M+ +G+ P+ TY + D A+ L R+M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+E +PN+ Y+ +I R + ++ ++ + DL +Y +I G C +
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
W +A Q EM+E+ + P VT+ L ++
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVK 337
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 36/236 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+ + Y +LI+G+ + ++ A L EMI G+ P++VT + LL+G+C L
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 56 ---------------HPNERFEKTIRN----------------AEKVFDEMRVRGIEPDV 84
HP E ++ AE++++EM RGI PD
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++S ++ + + + + M K P V T+T+++ C GR++D EL E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
M R G+ +A TY +R + NGA+ ++++M + I N+L G++
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 92/228 (40%), Gaps = 36/228 (15%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + +A +F +M P V F ++ V R +P L + M+ K I + ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++KC CSC ++ A G++ + G+ P T+ + A+ + QM E
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C PN+ T +T L++GLC + +
Sbjct: 178 TT-CRPNVVT-----------------------------------FTTLMNGLCREGRIV 201
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
EA M+E GL P ++T+ T+ G+ + + L +K++E S
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 152/304 (50%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P LI G+CK+ R++ A ++ + I G EP+ +TYN +NG+C+
Sbjct: 253 PTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGH------- 305
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A KV D M G +PDV +++IV++ + + + + LN M E+G P + T
Sbjct: 306 ---VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITT 362
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ LCS R+E+A +L ++ G+SP T+N D A++L+ +MK
Sbjct: 363 FNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMK 422
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P+ TYN LI +L ++ ++ ++ + +Y +I GLC+K +
Sbjct: 423 SSG-CTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRI 481
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE-----SITFGSE 296
+EA + F +M +G+ +TF TL GL + + +L ++ E +IT+ S
Sbjct: 482 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSI 541
Query: 297 FQNY 300
+Y
Sbjct: 542 LTHY 545
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 136/316 (43%), Gaps = 50/316 (15%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y L+ + +++ + E EM ERG++P+VVT+N L+ +CR +
Sbjct: 152 VYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCR----------AHQV 201
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
R A + +EM G+ PD T+F+ ++ + + +L M E G PT T +
Sbjct: 202 RTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVL 261
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED-- 183
+ C GR+EDA + + + NG P TYN F A+K+ M ++
Sbjct: 262 INGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGH 321
Query: 184 --DL------------------------------CVPNIHTYNILIGMFMALNRMDMVRE 211
D+ C+P+I T+N LI + NR++ +
Sbjct: 322 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALD 381
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ V L D+ ++ +LI+ LC+ + A + F EM G P +VT+ TL
Sbjct: 382 LARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLI---- 437
Query: 272 QSDMLRTWRRLKKKLD 287
D L + +L K LD
Sbjct: 438 --DNLCSLGKLGKALD 451
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 138/289 (47%), Gaps = 13/289 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ + +LI C NR++ A ++ +G+ P+V T+N+L+N +C+
Sbjct: 357 LPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQL--- 413
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP-TV 119
A ++F+EM+ G PD +++ ++ K +LD L M+ G CP +
Sbjct: 414 -------ALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAG-CPRST 465
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY +++ LC RIE+AEE+ +M G+S +A T+N K + A +L Q
Sbjct: 466 VTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQ 525
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + L PN TYN ++ + + +I + + +D+ +Y LI+GLC+
Sbjct: 526 MISEGL-QPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAG 584
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ + A + M KG+ + + + L + + R L +++ E
Sbjct: 585 RTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTE 633
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 51/272 (18%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y ++I G CK RI+ AE +M +G+ N +T+N L++G+C+ +K I
Sbjct: 468 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK----------DKRID 517
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A ++ +M G++P+ +++ +L Y + + + D L M G V TY +++
Sbjct: 518 DANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLI 577
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC GR + A +LL M G+ + + YN + R + AM L+R+M
Sbjct: 578 NGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREM------ 631
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT--MLIHGLCEKQ-KWKE 243
+E+G D++T ++ GLC +E
Sbjct: 632 --------------------------------TEVGEPPDAFTYKIVFRGLCRGGGSIRE 659
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
A + +EM++KG +P+ +F L GL+ M
Sbjct: 660 AFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGM 691
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + LI CK+ +A R EM G P+ VTYN L++ +C L
Sbjct: 393 PDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLG----- 447
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + EM G +++ ++ + + + + + + M +GI T
Sbjct: 448 -----KALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 502
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ LC RI+DA +L+ +M+ G+ P+ TYN Y + D A + + M
Sbjct: 503 FNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMT 562
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ V ++ TY LI R + ++ ++ + +Y +I L +
Sbjct: 563 ANGFEV-DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNT 621
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++A F EM E G P T++ ++RGL
Sbjct: 622 RDAMNLFREMTEVGEPPDAFTYKIVFRGL 650
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 16/253 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + +LI G CK RID A + + +MI G++PN +TYN +L C++
Sbjct: 499 NAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGD-------- 550
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I+ A + M G E DV ++ +++ +A + Q++L L M+ KG+ T Y
Sbjct: 551 --IKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAY 608
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMK 181
V++ L DA L EM G P A TY F+ RG A +M
Sbjct: 609 NPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMV 668
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMD-MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P ++ +L + L D +R I ++ ++LG DS I G + +K
Sbjct: 669 DKGF-IPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKADLG---DSDVSAIRGYLKIRK 724
Query: 241 WKEACQYFVEMIE 253
+ +A F +++
Sbjct: 725 FYDALATFGRLLK 737
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 123/264 (46%), Gaps = 33/264 (12%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G++ + V YN LLN + + + + E V+ EM RGI+PDV +F+ ++
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKM----------KLLETVYSEMGERGIKPDVVTFNTLMKA 194
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
RAH+ + ++ L M G+ P T+T++++ G I+ A + M+ G SP+
Sbjct: 195 LCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPT 254
Query: 154 AETYNCFFKEY--RGR-KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM-------AL 203
T N Y GR +DA G Y Q + + P+ TYN + AL
Sbjct: 255 KVTVNVLINGYCKLGRVEDALG----YIQQEIANGFEPDQITYNTFVNGLCQNGHVGHAL 310
Query: 204 NRMD-MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
MD MV+E + D+ +Y ++++ LC+ + +EA +M+E+G LP T
Sbjct: 311 KVMDVMVQEGHDP--------DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITT 362
Query: 263 FETLYRGLIQSDMLRTWRRLKKKL 286
F TL L + L L +++
Sbjct: 363 FNTLIVALCSGNRLEEALDLARQV 386
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 83/192 (43%), Gaps = 3/192 (1%)
Query: 100 PQLSLDKLNF-MKEKGICPTVATYTSVVKCLCSCGRIED-AEELLGEMVRNGVSPSAETY 157
P +L LN + + P Y +++ L + D + L+ EM R G
Sbjct: 57 PDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGHQVRVGVV 116
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHV 216
+ F + Y ++ A+ L + + + YN L+ + + ++M ++ +++ +
Sbjct: 117 HSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEM 176
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ D+ ++ L+ LC + + A EM G+ P + TF TL +G ++ +
Sbjct: 177 GERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSI 236
Query: 277 RTWRRLKKKLDE 288
+ R+K ++ E
Sbjct: 237 KAALRVKARMLE 248
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 149/290 (51%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+ LI +CK ++D+A FLG+M E G++ V Y+ L++G C+ L
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL------ 441
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R A+ +FDEM G++P+V ++ ++ Y + + + + M KGI P T
Sbjct: 442 ----RAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYT 497
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ LC R+ +A +L GEMV V P+ TYN + + + A +L +M
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV 557
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L VP+ +TY LI + R+ RE N ++G + L+ ++ L+HG C++ +
Sbjct: 558 EKGL-VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRL 616
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+A EM+ +G+ V + L G+++ R+ L K++ ++ +
Sbjct: 617 DDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGL 666
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 138/323 (42%), Gaps = 46/323 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG--------------------------- 34
+V Y +L+ G CK+ + E + EMIE G
Sbjct: 283 ADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDL 342
Query: 35 --------VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTS 86
V P++ YN L+N +C+ L AE +F+ M +G+ P+ +
Sbjct: 343 VNKVKKFGVAPSLFVYNALINSMCKDGKLD----------EAESLFNNMGHKGLFPNDVT 392
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
+SI++ + + K ++L L M E GI TV Y+S++ C G++ A+ L EM+
Sbjct: 393 YSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMI 452
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
NG+ P+ Y Y + + A +LY +M + PN +T+ LI NRM
Sbjct: 453 ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGIS-PNTYTFTALISGLCHANRM 511
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+++ + + + +Y +LI G C++ A + EM+EKGL+P T+ L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571
Query: 267 YRGLIQSDMLRTWRRLKKKLDEE 289
GL + + R L E
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGE 594
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 133/263 (50%), Gaps = 12/263 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+++L++G+CK R+D A EM+ RGV ++V Y+VL+ G+ R ++ R
Sbjct: 603 FSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILR----------QQDRR 652
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ + +M +G+ PD ++ ++ ++A +++ + M +G P V TYT+++
Sbjct: 653 SIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALI 712
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G ++ AE L EM+ + P+ TY CF + A++L+ + E L
Sbjct: 713 NGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFL- 771
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
N TYNILI F L R+ E+ ++ S + D SY+ +I+ C + KEA +
Sbjct: 772 -ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIK 830
Query: 247 YFVEMIEKGLLPQKVTFETLYRG 269
+ M+ +G+ P V + L G
Sbjct: 831 LWESMLNRGVNPDTVAYNFLIYG 853
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT+++ C++ A +G M G + +V TYNV + G+C+ N+R
Sbjct: 213 PDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCK------NQR- 265
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++ + + +G+ DV ++ ++ + + + + +N M E G P+ A
Sbjct: 266 ---VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAA 322
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++V L G I A +L+ ++ + GV+PS YN + A L+ M
Sbjct: 323 VSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMG 382
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L PN TY+ILI F ++D+ + + + Y+ LI G C+ K
Sbjct: 383 HKGL-FPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ A F EMI GL P V + +L G + L RL ++ + I+
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGIS 492
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 122/282 (43%), Gaps = 11/282 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P ++ + ++ G +I + MA E++ G+ P+V Y ++ +C
Sbjct: 177 LPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCEL-------- 228
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K A +V M G + V ++++ + + + +++ N + KG+ V
Sbjct: 229 --KDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVG 286
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V LC E EE++ EM+ G PS + R + + A L ++
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV 346
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K+ + P++ YN LI ++D ++N++ L + +Y++LI C++ K
Sbjct: 347 KKFGV-APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
A + +M E G+ + +L G + LR + L
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 81/192 (42%), Gaps = 44/192 (22%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEM------------------------IERGVE 36
+PNV YT+LI G CKI +D AE EM IE+ ++
Sbjct: 702 LPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ 761
Query: 37 ----------PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTS 86
N VTYN+L+ G C+ I+ A +V M GI PD S
Sbjct: 762 LHDVLLEGFLANTVTYNILIRGFCKLGR----------IQEAAEVLVNMIDSGISPDCIS 811
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
+S +++ Y R + ++ M +G+ P Y ++ C G + A EL +M+
Sbjct: 812 YSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMM 871
Query: 147 RNGVSPSAETYN 158
R GV P+ TYN
Sbjct: 872 RRGVKPNRATYN 883
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ N Y LI G+CK+ RI A L MI+ G+ P+ ++Y+ ++ CRR L
Sbjct: 771 LANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDL----- 825
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K+++ M RG+ PD +++ +++ + + + + M +G+ P A
Sbjct: 826 -----KEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRA 880
Query: 121 TYTSVVKCLC 130
TY S++ C
Sbjct: 881 TYNSLIHGTC 890
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 95/247 (38%), Gaps = 34/247 (13%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI P + + S VL+ R + +++L + + G+ P V YT+VV+ LC A
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL-----YRQMKED---------D 184
E++G M +G S TYN F + + A+++ Y+ ++ D
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLG 294
Query: 185 LC--------------------VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
LC VP+ + L+ + ++ N VK +
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
L Y LI+ +C+ K EA F M KGL P VT+ L + L
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414
Query: 285 KLDEESI 291
K+ E I
Sbjct: 415 KMTEVGI 421
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL 55
P+ Y LIYG C + A +M+ RGV+PN TYN L++G C +S+
Sbjct: 842 PDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSV 895
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 27/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y S+I G+C R AE+ L EM+ER + P+VVTYN L+N + F
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF-----F 342
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AE+++DEM RGI P+ ++S ++ + + ++ + M KG P + T
Sbjct: 343 E-----AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C RI+D ELL EM G+ TYN + D N A+ L ++M
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-----------DLDSYTM 230
LC P+I T + L+ ++ E++ ++ S+ L D+ +Y +
Sbjct: 458 SSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
LI GL + K+ EA + + EM +G++P +T+ ++ GL + L ++ + +S
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576
Query: 291 -----ITFGSEFQNY 300
+TF + Y
Sbjct: 577 FSPNVVTFTTLINGY 591
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 136/281 (48%), Gaps = 22/281 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y+S+I G+CK NR+D AE M +G PN++T+N L++G C
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG--------- 407
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K I + ++ EM G+ D T+++ ++H + +LD L M G+CP +
Sbjct: 408 -AKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVR-----------NGVSPSAETYNCFFKEYRGRKD 169
T +++ LC G+++DA E+ M + NGV P +TYN
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A +LY +M + VP+ TY+ +I +R+D ++++ + ++ ++T
Sbjct: 527 FLEAEELYEEMPHRGI-VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 585
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
LI+G C+ + + + F EM +G++ +T+ TL G
Sbjct: 586 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 10/269 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+L+ G C+ RI A L M+E G++P +TY +++G+C++
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD------- 234
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
T+ + V I P+V +S ++ + + + + M+EKGI P + T
Sbjct: 235 --TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ CS GR DAE+LL EM+ +SP TYN + A +LY +M
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PN TY+ +I F NR+D ++ + +L ++ LI G C ++
Sbjct: 353 PRGI-IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + EM E GL+ T+ TL G
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGF 440
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 125/272 (45%), Gaps = 10/272 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + L+ ++ R D+ +M + + ++ ++ +L+ C + L
Sbjct: 76 LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLP---- 131
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A F ++ G+ PDV +F+ +LH + +L+ + M E P V
Sbjct: 132 ------FALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVV 185
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T+++ LC GRI +A LL M+ +G+ P+ TY + D A+ L R+M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+E +PN+ Y+ +I R + ++ ++ + DL +Y +I G C +
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
W +A Q EM+E+ + P VT+ L ++
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVK 337
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 36/236 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+ + Y +LI+G+ + ++ A L EMI G+ P++VT + LL+G+C L
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 56 ---------------HPNERFEKTIRN----------------AEKVFDEMRVRGIEPDV 84
HP E ++ AE++++EM RGI PD
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++S ++ + + + + M K P V T+T+++ C GR++D EL E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
M R G+ +A TY +R + NGA+ ++++M + I N+L G++
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 36/228 (15%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + +A +F +M P V F ++ V R +P L + M+ K I + ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++KC CSC ++ A G++ + G+ P T+N + A+ L+ QM E
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C PN+ T +T L++GLC + +
Sbjct: 178 TT-CRPNVVT-----------------------------------FTTLMNGLCREGRIV 201
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
EA M+E GL P ++T+ T+ G+ + + L +K++E S
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 135/273 (49%), Gaps = 11/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + L+ G+CK ++ + M+++G++PNVVTY L++G C
Sbjct: 265 PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC----------L 314
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A+ + M RG+ PD+ S++I++ + + K +++ M K I P V T
Sbjct: 315 VKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVT 374
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC G+I A +L+ EM GV P TY+ + A+ L ++K
Sbjct: 375 YNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 434
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN++TY ILI R++ I+ + + +++YT++IHG C K +
Sbjct: 435 DQGI-RPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLF 493
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA +M + +P VT+E + R L D
Sbjct: 494 DEALALLSKMKDNSCIPDAVTYEIIIRSLFDKD 526
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 143/285 (50%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV MY+++I G CK ++ A EM+ +G+ PNVVTY+ L++G L
Sbjct: 195 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQL------ 248
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A +F++M + I+PDV +F+I++ + + K + M ++GI P V T
Sbjct: 249 ----KDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVT 304
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C + A+ +L M + GV+P ++YN + K + AM L+++M
Sbjct: 305 YCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMH 364
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +P++ TYN LI L ++ ++ + + + D+ +Y+ ++ LC+ +
Sbjct: 365 HKHI-IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQV 423
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A ++ ++G+ P T+ L GL + L + + L
Sbjct: 424 DKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDL 468
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 142/285 (49%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI+G CK+ A L + V+PNVV Y+ +++G+C+ +K +
Sbjct: 165 YGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCK----------DKHVN 214
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A ++ EM +GI P+V ++S ++ + + + ++D N M + I P V T+ +V
Sbjct: 215 DAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILV 274
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G++++ + + M++ G+ P+ TY Y K+ N A + M + +
Sbjct: 275 DGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVN 334
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+I +YNILI F + ++D ++ + + D+ +Y LI GLC+ K A +
Sbjct: 335 -PDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALK 393
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM ++G+ P +T+ ++ L ++ + L KL ++ I
Sbjct: 394 LVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGI 438
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 48/273 (17%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G PN +T+ L+ G+C + +H F D + G + D + ++H
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFH----------DNVVAMGFQLDQVGYGTLIHG 171
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ + + +LD L + + P V Y++++ +C + DA +L EMV G+SP+
Sbjct: 172 LCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPN 231
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD------ 207
TY+ + A+ L+ +M +++ P+++T+NIL+ F +M
Sbjct: 232 VVTYSALISGFFTVGQLKDAIDLFNKMILENI-KPDVYTFNILVDGFCKDGKMKEGKTVF 290
Query: 208 -----------------------MVREIWNHVKG-----SELGL--DLDSYTMLIHGLCE 237
+V+E+ N K S+ G+ D+ SY +LI G C+
Sbjct: 291 AMMMKQGIKPNVVTYCSLMDGYCLVKEV-NKAKSILYTMSQRGVNPDIQSYNILIDGFCK 349
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+K EA F EM K ++P VT+ +L GL
Sbjct: 350 IKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGL 382
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y SLI G CK+ +I A + + EM +RGV P+++TY+ +L+ +C+ N +
Sbjct: 369 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCK------NHQ 422
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K I K+ D+ GI P++ +++I++ + + + + + + KG TV
Sbjct: 423 VDKAIALLTKLKDQ----GIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVN 478
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ C+ G ++A LL +M N P A TY + + + + A KL R+M
Sbjct: 479 TYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL-REM 537
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 140/288 (48%), Gaps = 11/288 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ ++K YT L+ GW + + EM + G EP+VVTY +L+N C+ + R
Sbjct: 140 VADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCK------SRR 193
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ I ++F EM + +P + +++ + +L+ K G P
Sbjct: 194 YDDAI----ELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGFVPEAP 249
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +VV C R++D + + EM + GV PSA TY+ A ++++M
Sbjct: 250 TYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKM 309
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P++ TY I++ MF +R+DM ++W+ +K + + ++ LI+ LC + K
Sbjct: 310 SCEG-CQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESK 368
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
EAC YF EM++ G+ P F L + L+ T ++KLD+
Sbjct: 369 LDEACMYFQEMLDVGIRPPAQLFSNLKQNLLDEGKKDTVVVFERKLDK 416
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 15/256 (5%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G++ N LL+ +C+ + + A+ VFD+M RG D+ S++I+L
Sbjct: 103 GLKIESSDVNRLLDTLCK----------SRQVERAQLVFDKMNKRGFVADIKSYTILLEG 152
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ + ++ N MK++G P V TY ++ C R +DA EL EM PS
Sbjct: 153 WGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPS 212
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
Y K + A++ + K VP TYN ++G + RMD V+
Sbjct: 213 PHIYCTLINGLGAEKRLSEALEFFELSKASGF-VPEAPTYNAVVGAYCWSERMDDVQRTI 271
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ ++ +G +Y +++H L K K A F +M +G P T+E + R
Sbjct: 272 DEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNE 331
Query: 274 D----MLRTWRRLKKK 285
D ++ W ++K K
Sbjct: 332 DRVDMAIKVWDQMKAK 347
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 27/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y S+I G+C R AE+ L EM+ER + P+VVTYN L+N + F
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF-----F 342
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AE+++DEM RGI P+ ++S ++ + + ++ + M KG P + T
Sbjct: 343 E-----AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C RI+D ELL EM G+ TYN + D N A+ L ++M
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-----------DLDSYTM 230
LC P+I T + L+ ++ E++ ++ S+ L D+ +Y +
Sbjct: 458 SSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
LI GL + K+ EA + + EM +G++P +T+ ++ GL + L ++ + +S
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576
Query: 291 -----ITFGSEFQNY 300
+TF + Y
Sbjct: 577 FSPNVVTFTTLINGY 591
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 136/281 (48%), Gaps = 22/281 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y+S+I G+CK NR+D AE M +G PN++T+N L++G C
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG--------- 407
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K I + ++ EM G+ D T+++ ++H + +LD L M G+CP +
Sbjct: 408 -AKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVR-----------NGVSPSAETYNCFFKEYRGRKD 169
T +++ LC G+++DA E+ M + NGV P +TYN
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A +LY +M + VP+ TY+ +I +R+D ++++ + ++ ++T
Sbjct: 527 FLEAEELYEEMPHRGI-VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 585
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
LI+G C+ + + + F EM +G++ +T+ TL G
Sbjct: 586 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 129/273 (47%), Gaps = 18/273 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+L+ G C+ RI A L M+E G++P +TY +++G+C+
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK---------- 231
Query: 62 EKTIRNAEKVFDEMR----VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
I + D +R + I P+V +S ++ + + + + M+EKGI P
Sbjct: 232 ---IGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ TY S++ CS GR DAE+LL EM+ +SP TYN + A +LY
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+M + +PN TY+ +I F NR+D ++ + +L ++ LI G C
Sbjct: 349 DEMLPRGI-IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ + + EM E GL+ T+ TL G
Sbjct: 408 AKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 124/272 (45%), Gaps = 10/272 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + L+ ++ R D+ +M + + ++ ++ +L+ C + L
Sbjct: 76 LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLP---- 131
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A F ++ G+ PDV +F+ +LH + +L+ + M E P V
Sbjct: 132 ------FALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVV 185
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T+++ LC GRI +A LL M+ +G+ P+ TY D A+ L R+M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKM 245
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+E +PN+ Y+ +I R + ++ ++ + DL +Y +I G C +
Sbjct: 246 EEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
W +A Q EM+E+ + P VT+ L ++
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVK 337
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 36/236 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+ + Y +LI+G+ + ++ A L EMI G+ P++VT + LL+G+C L
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 56 ---------------HPNERFEKTIRN----------------AEKVFDEMRVRGIEPDV 84
HP E ++ AE++++EM RGI PD
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++S ++ + + + + M K P V T+T+++ C GR++D EL E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
M R G+ +A TY +R + NGA+ ++++M + I N+L G++
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 109/266 (40%), Gaps = 37/266 (13%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + +A +F +M P V F ++ V R +P L + M+ K I + ++
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++KC CSC ++ A G++ + G+ P T+N + A+ L+ QM E
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 183 DDLCVPNIHTYNILIG----------MFMALNRM----------------DMVREIWNHV 216
C PN+ T+ L+ L+RM D + +I + V
Sbjct: 178 TT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTV 236
Query: 217 KGSELGLDLDS----------YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+L ++ Y+ +I LC+ + +A F EM EKG+ P T+ ++
Sbjct: 237 SALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESIT 292
G S +L +++ E I+
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKIS 322
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 153/293 (52%), Gaps = 14/293 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G+CK ++ A+ L EM+ + + PN +T+N+L++G CR
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCR---------- 311
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A+KVF+EM+ +G++P+V +++ +++ K +L + M G+ P V T
Sbjct: 312 DENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVT 371
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +++A E+L ++ + G++P+ T+N Y + A L M
Sbjct: 372 YNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML 431
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +C PN+ TYN LI F + R++ ++G+ L DL +Y +L+ LC+K +
Sbjct: 432 DTGVC-PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGET 490
Query: 242 KEACQYFVEMI---EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++A + EM +KG VT+ L +G L RL ++ E+ +
Sbjct: 491 RKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGL 543
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 125/267 (46%), Gaps = 47/267 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI G C ++D A +M G++PNVVTYN L+NG C++
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKK--------- 382
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K ++ A ++ D++ RG+ P+V +F+ ++ Y +A + + + M + G+CP V+T
Sbjct: 383 -KMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C G +++A +L EM NG+ TYN + + A++L +M
Sbjct: 442 YNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMT 501
Query: 182 --EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
E NI TYN+ LI G C K
Sbjct: 502 LMEKKGRRANIVTYNV-----------------------------------LIKGFCNKG 526
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETL 266
K +EA + EM+EKGL+P + T++ L
Sbjct: 527 KLEEANRLLNEMLEKGLIPNRTTYDIL 553
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 126/257 (49%), Gaps = 11/257 (4%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
L++ + K +D+A + G + ++ N +L + + E I E
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVK----------EGRIGVVE 214
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
V+ EM R I +V +F +V++ + K Q + D + MK G P+V TY +++
Sbjct: 215 SVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGY 274
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C G++ A+ LL EMV + P+ T+N + ++ A K++ +M+ L PN
Sbjct: 275 CKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGL-QPN 333
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+ TYN LI + ++D + + + G L ++ +Y LI+G C+K+ KEA +
Sbjct: 334 VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393
Query: 250 EMIEKGLLPQKVTFETL 266
++ ++GL P +TF TL
Sbjct: 394 DIGKRGLAPNVITFNTL 410
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 95/252 (37%), Gaps = 41/252 (16%)
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
+++ Y + + L+L+ + + G + + ++ L GRI E + EM+R
Sbjct: 164 MLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR 223
Query: 149 -----------------------------------GVSPSAETYNCFFKEYRGRKDANGA 173
G SPS TYN Y A
Sbjct: 224 RIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKA 283
Query: 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
L ++M + PN T+NILI F + ++++ ++ L ++ +Y LI+
Sbjct: 284 DALLKEMVAKRIH-PNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLIN 342
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDE 288
GLC K EA +M GL P VT+ L G + ML+ R + K+ L
Sbjct: 343 GLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAP 402
Query: 289 ESITFGSEFQNY 300
ITF + Y
Sbjct: 403 NVITFNTLIDAY 414
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 145/290 (50%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + +LI+G N+ A + M+ RG +P++ TY ++NG+C+R
Sbjct: 167 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD------- 219
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + +M IE DV ++ ++ +L+ M KGI P V T
Sbjct: 220 ---IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 276
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+++CLC+ GR DA LL +M+ ++P+ T++ + A KLY +M
Sbjct: 277 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 336
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TY+ LI F +R+D + ++ + + ++ +Y LI G C+ ++
Sbjct: 337 KRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 395
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+E + F EM ++GL+ VT+ TL +GL Q+ +++ KK+ + +
Sbjct: 396 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 445
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 145/288 (50%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI C R A R L +MIER + PNVVT++ L++ +
Sbjct: 272 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK---------- 321
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK++DEM R I+PD+ ++S +++ + + + M K P V T
Sbjct: 322 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 381
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+E+ EL EM + G+ + TYN + D + A K++++M
Sbjct: 382 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 441
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + P+I TY+IL+ +++ ++ +++ S++ D+ +Y ++I G+C+ K
Sbjct: 442 SDGV-PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 500
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++ F + KG+ P + + T+ G + + L +++ E+
Sbjct: 501 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 548
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 44/301 (14%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI +C+ +++ +A LG+M++ G EP++VT + LLNG C K I
Sbjct: 102 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCH----------GKRIS 151
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + D+M V +P+ +F+ ++H +K ++ ++ M +G P + TY +VV
Sbjct: 152 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 211
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL- 185
LC G I+ A LL +M + + Y K+ N A+ L+ +M +
Sbjct: 212 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 271
Query: 186 -----------CV----------------------PNIHTYNILIGMFMALNRMDMVREI 212
C+ PN+ T++ LI F+ ++ ++
Sbjct: 272 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 331
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++ + + D+ +Y+ LI+G C + EA F MI K P VT+ TL +G +
Sbjct: 332 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 391
Query: 273 S 273
+
Sbjct: 392 A 392
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y +LI G + DMA++ +M+ GV P+++TY++LL+G+C+ L
Sbjct: 413 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE------ 466
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A VF+ ++ +EPD+ +++I++ +A K + D + KG+ P V Y
Sbjct: 467 ----KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 522
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ C G E+A+ L EM +G P++ TYN + D + +L ++M+
Sbjct: 523 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 582
Query: 183 DDLCVPNIHTYNILIGMF 200
V + T +++I M
Sbjct: 583 CGF-VGDASTISMVINML 599
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 130/282 (46%), Gaps = 16/282 (5%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
++D A GEM++ P++V +N LL+ + + +F+ I E+ M+
Sbjct: 44 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKM------NKFDLVISLGER----MQNL 93
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
I D+ S++I+++ + R + L+L L M + G P + T +S++ C RI +A
Sbjct: 94 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 153
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ +M P+ T+N A+ A+ L +M C P++ TY ++
Sbjct: 154 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDLFTYGTVVN 212
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
+D+ + ++ ++ D+ YT +I LC + +A F EM KG+ P
Sbjct: 213 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 272
Query: 259 QKVTFETLYRGLIQ----SDMLRTWRRL-KKKLDEESITFGS 295
VT+ +L R L SD R + ++K++ +TF +
Sbjct: 273 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 314
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +YT++I G+C+ + A+ EM E G PN TYN L+ RA L ++
Sbjct: 517 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI-----RARLRDGDK- 570
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
+ ++ EMR G D ++ S+V+++
Sbjct: 571 ----AASAELIKEMRSCGFVGDASTISMVINM 598
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 12/278 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + ++I+G+ K + A + EM+++GVEP+VVTYN +++ +C+
Sbjct: 262 PDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCK---------- 311
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + AE V +M +G+EPD +++ ++H YS + + S M KG+ P + T
Sbjct: 312 ARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVT 371
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S + LC GR +DAEE+ M G P +Y+ Y L+ M
Sbjct: 372 FNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMA 431
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + V N H +NILI MD ++ ++G + D+ +Y+ LI C +
Sbjct: 432 DKGI-VANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRL 490
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL-IQSDMLRT 278
+A + F +MI GL P V + +L G + D+++
Sbjct: 491 ADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKA 528
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 122/249 (48%), Gaps = 14/249 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y++LI +C++ R+ A +MI G+EPN V Y+ L++G C L
Sbjct: 472 PDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDL------ 525
Query: 62 EKTIRNAEKVFDEMRVRGI-EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A+++ EM +GI P++ FS ++H + + D N + G PT+
Sbjct: 526 ----VKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIV 581
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ S++ C G++E A +L MV G+ P TYN Y + + L+R+M
Sbjct: 582 TFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREM 641
Query: 181 KEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ P TY+I++ G+F A R +++++ + S +D+D+Y +L+ GLC
Sbjct: 642 LHKKV-KPTTVTYSIVLDGLFHA-GRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRND 699
Query: 240 KWKEACQYF 248
EA F
Sbjct: 700 LTDEAITLF 708
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 150/357 (42%), Gaps = 65/357 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNG-VCRRASLHPNER 60
P+V Y S++ CK +D AE L +M+++GVEP+ +TY +++G C +
Sbjct: 297 PDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKM 356
Query: 61 FEKTI------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS- 95
F K ++AE++F M +G PD+ S+SI+LH Y+
Sbjct: 357 FRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYAT 416
Query: 96 ------------------------------RAHKPQLSLDKLNF----MKEKGICPTVAT 121
AH + +D+ M+ +G+ P V T
Sbjct: 417 EGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVT 476
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C GR+ DA E +M+ G+ P+ Y+ + D A +L +M
Sbjct: 477 YSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMM 536
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PNI ++ +I R+ +++N V + ++ LI G C K
Sbjct: 537 SKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKM 596
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRR-LKKKLDEESITF 293
++A M+ G+ P VT+ TL G +S D L +R L KK+ ++T+
Sbjct: 597 EKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTY 653
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 12/284 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ ++S+I+ C R+ A +I G P +VT+N L++G C +
Sbjct: 543 PNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVG------KM 596
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK A V D M GIEPDV +++ ++ Y ++ K L M K + PT T
Sbjct: 597 EK----AFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVT 652
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ V+ L GR A+++ EM+ +G + +TY K + A+ L+ ++
Sbjct: 653 YSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLG 712
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C +I N +I + R + +++ + S L ++ +Y ++IH L ++
Sbjct: 713 AMD-CKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSV 771
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRTWRRLKK 284
+EA F M + G P + R L+Q D+++ + K
Sbjct: 772 EEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSK 815
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 15/269 (5%)
Query: 14 WCKINRIDMA-ERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
C R D A + L M + G PN ++YN ++ +C + R ++ + +++
Sbjct: 201 LCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLC------GDSRSQEALDMVQRMA 254
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
E PDV SF+ V+H + + + + + +N M +KG+ P V TY S+V LC
Sbjct: 255 KEGG--RCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKA 312
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
++ AE +L +MV GV P TY Y + K++R+M L +P I T
Sbjct: 313 RAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGL-IPGIVT 371
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
+N + R EI+ ++ DL SY++L+HG + ++ + F M
Sbjct: 372 FNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMA 431
Query: 253 EKGLLPQKVTFETLY-----RGLIQSDML 276
+KG++ F L RG++ ML
Sbjct: 432 DKGIVANCHCFNILISAHAKRGMMDEAML 460
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 23/255 (9%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA-------HKPQLSLDKLNFMKEKGICPTV 119
+A +FDE+ +G + + L +RA + P L L N + + P V
Sbjct: 92 DAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALFNRICREEAGPRV 151
Query: 120 A-----TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
A TY ++ C C R + ++R G+ N F K K + A+
Sbjct: 152 APLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAV 211
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNR----MDMVREIWNHVKGSELGLDLDSYTM 230
+ D CVPN +YN +I +R +DMV+ + +G D+ S+
Sbjct: 212 DVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAK--EGGRCSPDVVSFNT 269
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM-----LRTWRRLKKK 285
+IHG ++ + +AC EM++KG+ P VT+ ++ L ++ L + + K
Sbjct: 270 VIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKG 329
Query: 286 LDEESITFGSEFQNY 300
++ + +T+ + Y
Sbjct: 330 VEPDGLTYTAIIHGY 344
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 2/213 (0%)
Query: 84 VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE-LL 142
V ++ I++ RA +P L + G+ + +KCLC R ++A + LL
Sbjct: 156 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLL 215
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM-KEDDLCVPNIHTYNILIGMFM 201
M G P+A +YN K G + A+ + ++M KE C P++ ++N +I F
Sbjct: 216 HRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 275
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
+ + N + + D+ +Y ++ LC+ + +A +M++KG+ P +
Sbjct: 276 KQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGL 335
Query: 262 TFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
T+ + G S + ++ +K+ + + G
Sbjct: 336 TYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPG 368
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 145/290 (50%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + +LI+G N+ A + M+ RG +P++ TY ++NG+C+R
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD------- 235
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + +M IE DV ++ ++ +L+ M KGI P V T
Sbjct: 236 ---IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+++CLC+ GR DA LL +M+ ++P+ T++ + A KLY +M
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TY+ LI F +R+D + ++ + + ++ +Y LI G C+ ++
Sbjct: 353 KRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+E + F EM ++GL+ VT+ TL +GL Q+ +++ KK+ + +
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 145/288 (50%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI C R A R L +MIER + PNVVT++ L++ +
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK---------- 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK++DEM R I+PD+ ++S +++ + + + M K P V T
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+E+ EL EM + G+ + TYN + D + A K++++M
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + P+I TY+IL+ +++ ++ +++ S++ D+ +Y ++I G+C+ K
Sbjct: 458 SDGV-PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++ F + KG+ P + + T+ G + + L +++ E+
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 44/301 (14%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI +C+ +++ +A LG+M++ G EP++VT + LLNG C K I
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCH----------GKRIS 167
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + D+M V +P+ +F+ ++H +K ++ ++ M +G P + TY +VV
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL- 185
LC G I+ A LL +M + + Y K+ N A+ L+ +M +
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
Query: 186 -----------CV----------------------PNIHTYNILIGMFMALNRMDMVREI 212
C+ PN+ T++ LI F+ ++ ++
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++ + + D+ +Y+ LI+G C + EA F MI K P VT+ TL +G +
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 273 S 273
+
Sbjct: 408 A 408
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y +LI G + DMA++ +M+ GV P+++TY++LL+G+C+ L
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE------ 482
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A VF+ ++ +EPD+ +++I++ +A K + D + KG+ P V Y
Sbjct: 483 ----KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ C G E+A+ L EM +G P++ TYN + D + +L ++M+
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Query: 183 DDLCVPNIHTYNILIGMF 200
V + T +++I M
Sbjct: 599 CGF-VGDASTISMVINML 615
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 130/282 (46%), Gaps = 16/282 (5%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
++D A GEM++ P++V +N LL+ + + +F+ I E+ M+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKM------NKFDLVISLGER----MQNL 109
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
I D+ S++I+++ + R + L+L L M + G P + T +S++ C RI +A
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ +M P+ T+N A+ A+ L +M C P++ TY ++
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDLFTYGTVVN 228
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
+D+ + ++ ++ D+ YT +I LC + +A F EM KG+ P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 259 QKVTFETLYRGLIQ----SDMLRTWRRL-KKKLDEESITFGS 295
VT+ +L R L SD R + ++K++ +TF +
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +YT++I G+C+ + A+ EM E G PN TYN L+ RA L ++
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI-----RARLRDGDK- 586
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
+ ++ EMR G D ++ S+V+++
Sbjct: 587 ----AASAELIKEMRSCGFVGDASTISMVINM 614
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V YT++I G CKI A +M E G +PNVVTYN+L++ +C+
Sbjct: 198 PTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCK---------- 247
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K + A +F M+ + I PD+ +++ ++ + + + LN M I P + T
Sbjct: 248 DKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFT 307
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V +C G++ +A+ + M GV P TY+ Y R + A KL+ M
Sbjct: 308 FNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMI 367
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P+ +YNILI + R+D ++++N + L D +Y LIHGLC+ +
Sbjct: 368 TKG-CKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRL 426
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+EA F M G LP T+ L G + L RL
Sbjct: 427 REAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRL 467
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 143/287 (49%), Gaps = 15/287 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +LI G CK+ + A F + G +P V TY ++NG+C+
Sbjct: 163 PDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIG-------- 214
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E T A +F +M G +P+V +++I++ + +LD ++MK K I P + T
Sbjct: 215 ETTA--AAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFT 272
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+++ LC+ R ++A LL EM + P+ T+N + A +++ M
Sbjct: 273 YNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMT 332
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMV--REIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
E + P++ TY+ L M+ RM++V R++++ + D SY +LI G C+ +
Sbjct: 333 EMGV-EPDVVTYSSL--MYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAK 389
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ EA Q F EMI +GL P V + TL GL Q LR + L K +
Sbjct: 390 RIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNM 436
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 133/296 (44%), Gaps = 26/296 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SLI G C R A L EM + PN+ T+NVL++ +C+ + +
Sbjct: 268 PDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGV 327
Query: 62 EKT-------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
KT I A K+FD M +G +PD S++I++ Y +
Sbjct: 328 FKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCK 387
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + N M +G+ P Y +++ LC GR+ +A++L M NG P T
Sbjct: 388 AKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFT 447
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ + A +L+R M+ L P+I YNILI + R++++ +
Sbjct: 448 YSMLLDGFCKEGYLGKAFRLFRVMQSTYL-KPDIAMYNILIDAMCKFGNLKDARKLFSEL 506
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
L ++ YT +I+ LC++ EA + F M G P + ++ + RG +Q
Sbjct: 507 FVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQ 562
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 129/289 (44%), Gaps = 15/289 (5%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
ID A M+ R P ++ + LL+ + + ++ + + K +M + G
Sbjct: 75 IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMG------QYYGAVISLSK---QMELAG 125
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
+ PD+ + SI++ +S + L+ + M + G+ P T+ +++ LC G+ A
Sbjct: 126 LSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAV 185
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
E + +G P+ TY + A L+++M+E C PN+ TYNILI
Sbjct: 186 EFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAG-CQPNVVTYNILIDS 244
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
++ +I++++K + D+ +Y LI GLC ++WKEA EM ++P
Sbjct: 245 LCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPN 304
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFGSEFQNYHFK 303
TF L + + + + + K + E + +T+ S Y +
Sbjct: 305 IFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLR 353
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 45/216 (20%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI G+CK RID A++ EMI +G+ P+ V YN L++G+C+ L
Sbjct: 373 PDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRL------ 426
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-----------------SRAHKPQLSL 104
R A+ +F M G PD+ ++S++L + S KP +++
Sbjct: 427 ----REAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAM 482
Query: 105 ---------------DKLNFMKE---KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
D E +G+ P V YT+++ LC G +++A E M
Sbjct: 483 YNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNME 542
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+G P +YN + + KD + A +L +M++
Sbjct: 543 GDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRD 578
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y+ L+ G+CK + A R M ++P++ YN+L++ +C+ +L
Sbjct: 442 LPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNL----- 496
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++A K+F E+ V+G+ P+V ++ +++ + +L+ M+ G P
Sbjct: 497 -----KDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEF 551
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+Y +++ A +L+GEM G A T
Sbjct: 552 SYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 148/296 (50%), Gaps = 11/296 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT LI G+CK ++ A + M++RGV PNVVTY L +G+C++ ++
Sbjct: 434 YTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGD----------VQ 483
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++ EM +G+E + +++ +++ +A + ++ + M + P V TYT+++
Sbjct: 484 AANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLI 543
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G ++ A LL EM+ G+ P+ TYN + G KL M E ++
Sbjct: 544 DALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNI- 602
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN TYN L+ + N M EI+ ++ ++G + ++Y +LI G C+ + KEA
Sbjct: 603 HPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALY 662
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
+ EMI+KG ++ L R L + R L + +E +T S+ +++
Sbjct: 663 FHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYI 718
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 144/293 (49%), Gaps = 17/293 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+L G CK + A L EM +G+E N TYN L+NG+C+ L
Sbjct: 464 PNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYL------ 517
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +M ++PDV +++ ++ ++ + L M +KGI PT+ T
Sbjct: 518 ----EQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVT 573
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C GR+E ++LL M+ + P+A TYN K+Y + ++Y+ M+
Sbjct: 574 YNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMR 633
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDL--DSYTMLIHGLCEK 238
D+ PN +TYNILI G A N M ++ H + + G L SY+ LI L +K
Sbjct: 634 SRDVG-PNENTYNILIKGHCKARN---MKEALYFHDEMIQKGFRLTATSYSALIRLLNKK 689
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+K+ EA + F +M ++GL + ++ D L + L +L E SI
Sbjct: 690 KKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASI 742
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 13/264 (4%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+YT+++ G+C + A R+ EM +G+ + VTY ++NG+CR L
Sbjct: 363 LYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVEL---------- 412
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
AEK+ EM R ++ D ++++++ Y + K + N M ++G+ P V TYT++
Sbjct: 413 EEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTAL 472
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
LC G ++ A ELL EM G+ +A TYN AM+ M D
Sbjct: 473 TDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADM--DTA 530
Query: 186 CV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
C+ P+++TY LI +D + + + + +Y +L++G C + +
Sbjct: 531 CLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 590
Query: 245 CQYFVEMIEKGLLPQKVTFETLYR 268
+ M+EK + P T+ +L +
Sbjct: 591 KKLLDWMLEKNIHPNAATYNSLMK 614
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 31/329 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI+G C + ++ A + L EM+ GVEPN Y ++ +C + + R
Sbjct: 289 PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRV 348
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ + +A + FDEM+ +G+ D +++ +++ R
Sbjct: 349 VEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCR 408
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + + L M + + TYT ++ C G++ +A ++ MV+ GV+P+ T
Sbjct: 409 AVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVT 468
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + D A +L +M L + N TYN LI ++ +
Sbjct: 469 YTALTDGLCKQGDVQAANELLHEMSNKGLEL-NACTYNSLINGLCKAGYLEQAMRTMADM 527
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ L D+ +YT LI LC+ A EM++KG+ P VT+ L G S +
Sbjct: 528 DTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 587
Query: 277 RTWRR-----LKKKLDEESITFGSEFQNY 300
++ L+K + + T+ S + Y
Sbjct: 588 EGGKKLLDWMLEKNIHPNAATYNSLMKQY 616
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 16/279 (5%)
Query: 17 INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR 76
++R+ + E E+ + NV +YN+LL +C +++A ++FDEM
Sbjct: 239 LSRLPLDEAI--ELFQELPHKNVCSYNILLKALCDAGR----------VKDARQLFDEM- 285
Query: 77 VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
PDV ++ I++H + + + ++ L+ M G+ P YTSVV LC G I
Sbjct: 286 --ASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWIS 343
Query: 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
DA ++ +MV+ V Y + + D A + + +M+ L + TY +
Sbjct: 344 DALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGV-TYTTM 402
Query: 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
I ++ ++ + L +D +YT+LI G C++ K EA Q M+++G+
Sbjct: 403 INGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGV 462
Query: 257 LPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
P VT+ L GL + ++ L ++ + + +
Sbjct: 463 TPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNA 501
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 82/212 (38%), Gaps = 60/212 (28%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
P+V YT+LI CK +D A L EM+++G++P +VTYNVL+NG C
Sbjct: 534 PDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKL 593
Query: 54 -------SLHPNER----------FEKTIRNAEKVFDEMRVRGIEPD------------- 83
++HPN E +++ +++ MR R + P+
Sbjct: 594 LDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCK 653
Query: 84 ----------------------VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
TS+S ++ + ++ K + + + M+++G+
Sbjct: 654 ARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDV 713
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Y + + +E L E+V + S
Sbjct: 714 YDFYIDLNFNEDNLESTLALCDELVEASIVKS 745
>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 151/286 (52%), Gaps = 25/286 (8%)
Query: 3 NVKMYTSLIYGWCK-INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+ K + ++ GWC I + AERF EM RG++ +VV+Y+ +++ + +L+
Sbjct: 253 DTKSFNIILNGWCNVIGSMREAERFWREMSNRGIQRDVVSYSSIISCYSKVTNLN----- 307
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K+F++M+ I PD ++ V+H ++A + +L+ + M+ KGI P T
Sbjct: 308 -----KVLKLFNQMKEMEIAPDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVT 362
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++K L +I +A+E+ EM++ G+SP+ TY+ FF R K L +MK
Sbjct: 363 YNSLIKPLSRARKINEAKEVFDEMLQRGLSPTIRTYHAFF---RILKSGEEVFMLLEKMK 419
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P+ TY +LI F ++D V ++W+ + + +G D SY +LIHGL K
Sbjct: 420 ETG-CHPDKDTYIMLIRRFCRWRQLDNVFKLWSEMSENGVGPDRSSYIVLIHGLFLNGKL 478
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+EA +Y++EM EK LP+ T DML+ W K+ D
Sbjct: 479 EEAYKYYIEMKEKQFLPEPKT----------EDMLQAWISGKETAD 514
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K+Y ++++ K + + A + M +G+ P+ VTYN L+ + R
Sbjct: 323 PDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVTYNSLIKPLSR---------- 372
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I A++VFDEM RG+ P + ++ + + + L+K MKE G P T
Sbjct: 373 ARKINEAKEVFDEMLQRGLSPTIRTYHAFFRILKSGEEVFMLLEK---MKETGCHPDKDT 429
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C ++++ +L EM NGV P +Y A K Y +MK
Sbjct: 430 YIMLIRRFCRWRQLDNVFKLWSEMSENGVGPDRSSYIVLIHGLFLNGKLEEAYKYYIEMK 489
Query: 182 EDDLCVPNIHTYNIL 196
E +P T ++L
Sbjct: 490 EKQF-LPEPKTEDML 503
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 68 AEKVFDEMRV-RGIEPDVT--SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
A + DEMR R VT + SI++ Y H +++ K+ + + +
Sbjct: 166 AWALIDEMRGGRTGTSLVTPHTLSIMIRRYCAVHDVGKAINTFYAHKQFKFGVGIEEFQN 225
Query: 125 VVKCLCSCGRIEDAEELL-------------GEMVRNG---VSPSAETYNCFFKEYRGR- 167
++ LC ++DAE+LL ++ NG V S F++E R
Sbjct: 226 LLSALCRYKNVQDAEQLLFCNRNVFPFDTKSFNIILNGWCNVIGSMREAERFWREMSNRG 285
Query: 168 ------------------KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
+ N +KL+ QMKE ++ P+ YN ++ AL + V
Sbjct: 286 IQRDVVSYSSIISCYSKVTNLNKVLKLFNQMKEMEIA-PDRKVYNAVV---HALAKASFV 341
Query: 210 REIWNHVK---GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+E N +K G + D +Y LI L +K EA + F EM+++GL P T+
Sbjct: 342 KEALNLMKAMEGKGIAPDSVTYNSLIKPLSRARKINEAKEVFDEMLQRGLSPTIRTYHAF 401
Query: 267 YRGL 270
+R L
Sbjct: 402 FRIL 405
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 146/293 (49%), Gaps = 16/293 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI CK RI A L M+++GV+PN+VTYN +++G C R
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLR--------- 453
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+ +F+ M G+EPD+ +++++++ Y + ++ M+ K + P +A+
Sbjct: 454 -NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS 512
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC+ GRI +ELL EM +G SP TYN + + + A+ L+RQ+
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV 572
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E P+ +T + ++ ++ M + H+ ++ +YT+LI+ LC+ +
Sbjct: 573 EG--IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSF 630
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
EA +M + P +TFE + L+Q R +KL EE I G
Sbjct: 631 GEAMLLLSKMEDNDRPPDAITFEIIIGVLLQ----RNETDKAEKLREEMIARG 679
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 138/269 (51%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + LI CK RI A+ L M +RG +P++VTYN L+ G C R ++H
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVH----- 317
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F+ M RG+EPDV ++++++ Y + ++ + K + PT+A+
Sbjct: 318 -----EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIAS 372
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC+ GRI ++LL EM + P TYN A+ + M
Sbjct: 373 YNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMM 432
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PNI TYN ++ + N +++ ++I+N + S L D+ +Y +LI+G C+ +
Sbjct: 433 KKGV-KPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMV 491
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA F EM K L+P ++ +L GL
Sbjct: 492 DEAIVLFKEMRHKNLIPDIASYNSLIDGL 520
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 136/268 (50%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ MY++LI G CK + A ++ ERG+ + VTYN L++G C R+
Sbjct: 193 PNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVG------RW 246
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + K+ E ++PD +F+I++ + + + L M ++G P + T
Sbjct: 247 QEVTQLLTKMVRE----NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVT 302
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ CS + +A EL MV+ G+ P YN Y K + AM L++++
Sbjct: 303 YNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC 362
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+L VP I +YN LI R+ V+++ + + GS D+ +Y +LI LC++ +
Sbjct: 363 NKNL-VPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRI 421
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA V M++KG+ P VT+ + G
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDG 449
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 138/315 (43%), Gaps = 35/315 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +T LI + + A L +++ G +PN+VT+N ++NG C + F
Sbjct: 88 PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
I+ A + EM ++P++ +S ++ +
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L + + E+GI TY S++ CS GR ++ +LL +MVR V P T
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT 267
Query: 157 YNCFFKEY--RGR-KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
+N GR +A G + + + E P+I TYN L+ + + + RE++
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEK----PDIVTYNALMEGYCSRENVHEARELF 323
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
N + L D+ +Y +LI G C+ + EA F E+ K L+P ++ +L GL S
Sbjct: 324 NRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNS 383
Query: 274 DMLRTWRRLKKKLDE 288
+ +KK LDE
Sbjct: 384 GRI---SHVKKLLDE 395
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y SLI G C + RI + L EM + G P+V+TYN+LL+ C+ +
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCK------TQP 560
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F+K I ++ V GI PD + ++ + K +++ D L + G P V
Sbjct: 561 FDKAISLFRQI-----VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQ 615
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ LC G +A LL +M N P A T+ R + + A KL +M
Sbjct: 616 TYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEM 675
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 101/256 (39%), Gaps = 11/256 (4%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
C+ +D A M+ P ++ LL + R +P A +F +
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGH-YPT---------AISLFTQ 80
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
++ +GI P + +F+I+++ Y + L + + G P + T+ +++ C G
Sbjct: 81 LQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGM 140
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
I A + ++ G TY A+ L ++M++ + PN+ Y+
Sbjct: 141 IFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSV-QPNLVMYS 199
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
LI + + + + + LD +Y LI G C +W+E Q +M+ +
Sbjct: 200 ALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE 259
Query: 255 GLLPQKVTFETLYRGL 270
+ P TF L L
Sbjct: 260 NVDPDDYTFNILIDAL 275
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 154/299 (51%), Gaps = 18/299 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN +T L+ CK + A M E+GVEPN+ TYN L+NG C R ++
Sbjct: 188 MPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMN---- 243
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A KVF+ M +G P V S+SI+++ Y ++ + + L M EK + P
Sbjct: 244 ------DASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTV 297
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++++ LC + +A+EL +M +G+ P+ TY+ A+KL M
Sbjct: 298 TYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSM 357
Query: 181 KEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+E L P+I YNILI GMF+A ++++ +E+++ + + + + +Y ++I GL ++
Sbjct: 358 QERKL-EPDIVLYNILIQGMFIA-GKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEG 415
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITF 293
EA + F +M + G LP ++ + +G +Q+ T +L ++ +S TF
Sbjct: 416 LSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTF 474
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 139/279 (49%), Gaps = 15/279 (5%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI C+++ I A L +M + G++P+ VT+ L+NG+C E I+ A
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCN----------EGRIKEAV 176
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF--MKEKGICPTVATYTSVVK 127
++F+EM R P+ +F+I++ V + K +S + F M EKG+ P + TY +++
Sbjct: 177 ELFNEMAGRDAMPNTVTFTILVDVLCK--KGMVSEARCVFETMTEKGVEPNIYTYNALMN 234
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
C + DA ++ MV G +PS +Y+ Y + + A L QM E +L +
Sbjct: 235 GYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKEL-I 293
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
PN TYN L+ + + +E++ + S + +L +Y++L+ GLC+ +EA +
Sbjct: 294 PNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKL 353
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
M E+ L P V + L +G+ + L + L KL
Sbjct: 354 LTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKL 392
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 124/231 (53%), Gaps = 11/231 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+ LI G+CK RID A+ L +M E+ + PN VTYN L+ G+C +SL
Sbjct: 259 PSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSL------ 312
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+++F +M G+ P++ ++SI+L + + +L L M+E+ + P +
Sbjct: 313 ----LEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVL 368
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ + G++E A+EL ++ NG+ PS TYN K ++ A KL+R+M
Sbjct: 369 YNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKM- 427
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
EDD +P+ +YN++I F+ ++ + + G D ++ ML+
Sbjct: 428 EDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 11/258 (4%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
GV N T N+L+N +CR + +H A V +M GI+PD +F+ +++
Sbjct: 116 GVAHNDYTLNILINSLCRLSHIH----------FAVSVLSKMFKLGIQPDSVTFTTLING 165
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ + +++ N M + P T+T +V LC G + +A + M GV P+
Sbjct: 166 LCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPN 225
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
TYN Y R + N A K++ M C P++H+Y+ILI + R+D + +
Sbjct: 226 IYTYNALMNGYCLRLEMNDASKVFEIMVGKG-CAPSVHSYSILINGYCKSRRIDEAKALL 284
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ EL + +Y L+ GLC EA + F +M G+LP T+ L GL +
Sbjct: 285 TQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKH 344
Query: 274 DMLRTWRRLKKKLDEESI 291
L +L + E +
Sbjct: 345 GHLEEALKLLTSMQERKL 362
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 140/288 (48%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI G C RI A EM R PN VT+ +L++ +C++
Sbjct: 154 PDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKG-------- 205
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A VF+ M +G+EP++ +++ +++ Y + + M KG P+V +
Sbjct: 206 --MVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHS 263
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ C RI++A+ LL +M + P+ TYN + A +L+++M
Sbjct: 264 YSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMC 323
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PN+ TY+IL+ ++ ++ ++ +L D+ Y +LI G+ K
Sbjct: 324 SSGM-LPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKL 382
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
+ A + F ++ G+ P T+ + +GL++ + +L +K++++
Sbjct: 383 EVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDD 430
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 122/267 (45%), Gaps = 11/267 (4%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
ID A MI P+ V L + ++ K + ++M + G
Sbjct: 67 IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKK----------KQYSTVVSLCNQMDLFG 116
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
+ + + +I+++ R ++ L+ M + GI P T+T+++ LC+ GRI++A
Sbjct: 117 VAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAV 176
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
EL EM P+ T+ + + A ++ M E + PNI+TYN L+
Sbjct: 177 ELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGV-EPNIYTYNALMNG 235
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ M+ +++ + G + SY++LI+G C+ ++ EA +M EK L+P
Sbjct: 236 YCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPN 295
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKL 286
VT+ TL +GL + L + L KK+
Sbjct: 296 TVTYNTLMQGLCHASSLLEAQELFKKM 322
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 155/292 (53%), Gaps = 11/292 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +T+LI K ++ A + MI++G PN+VTYN LLNG+C LH
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLC----LH---- 232
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +A ++F+ M RGI+ DV S++ +++ Y + K + ++ M+ + + P++
Sbjct: 233 --HQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSIT 290
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++K L GRI A+EL M G SPS +TY A+ ++R +
Sbjct: 291 TYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSL 350
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K P+I Y+ILIG R + EI++ + L ++ +Y ++I+GLC++ K
Sbjct: 351 KSIKY-KPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGK 409
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EA + FV+M E G +++F + RG +Q + ++ K++ E++ +
Sbjct: 410 LLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFS 461
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 149/322 (46%), Gaps = 46/322 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y+SLI G C++ ++ A EM+ +G++ NV+TYN L++ CR
Sbjct: 112 PNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFG-------- 163
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + F +M GI PDV +F+ ++ S+ K Q + M ++G P + T
Sbjct: 164 --LWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVT 221
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC +++ A L MV G+ +YN Y AM L+R+M+
Sbjct: 222 YNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQ 281
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC----- 236
++L P+I TY IL+ R+ +E++N+++ LD+YT+L+ GLC
Sbjct: 282 YEEL-TPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCI 340
Query: 237 ------------------------------EKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++W+ A + F E+ GL+P VT+ +
Sbjct: 341 EEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIM 400
Query: 267 YRGLIQSDMLRTWRRLKKKLDE 288
GL + L RL +++E
Sbjct: 401 INGLCKEGKLLEAERLFVQMEE 422
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 133/307 (43%), Gaps = 28/307 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV-----CRRA-SL 55
PN+ ++L+ G C ++ A +M G + +++ Y L+N + RRA L
Sbjct: 7 PNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVEL 66
Query: 56 HPNERFEKTIRN-------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
H E N K+F EM GI P+V +S +++ R
Sbjct: 67 HRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCR 126
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + +++ + M +GI V TY S++ C G ++A +MV G+ P T
Sbjct: 127 VGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVT 186
Query: 157 YNCFFKEYRGRKDANGAMKLYRQM-KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+ + A K++ M K+ + PNI TYN L+ ++MD ++
Sbjct: 187 FTTLIDHLSKKGKVQEAYKIFELMIKQGE--APNIVTYNSLLNGLCLHHQMDHAVRLFEV 244
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ + +D+ SY LI+G C K +EA F +M + L P T+ L + L Q+
Sbjct: 245 MVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGR 304
Query: 276 LRTWRRL 282
+RT + L
Sbjct: 305 IRTAKEL 311
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 108/240 (45%), Gaps = 11/240 (4%)
Query: 31 IERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIV 90
++ G +PN+VT + L+ G+C FE + +A ++FD+M G + D+ + +
Sbjct: 1 MKSGYQPNLVTVSTLVKGMC----------FEGKVMDALELFDKMTRSGFQGDILLYGYL 50
Query: 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
++ + + + +++ M + TY V+ LC G ++ EM+ G+
Sbjct: 51 INALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGI 110
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
P+ Y+ A+ L+ +M + N+ TYN LI
Sbjct: 111 CPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGI-KANVITYNSLIHASCRFGLWKEAT 169
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ + G + D+ ++T LI L +K K +EA + F MI++G P VT+ +L GL
Sbjct: 170 RTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGL 229
>gi|449431996|ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
gi|449477985|ref|XP_004155184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
Length = 485
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 147/302 (48%), Gaps = 24/302 (7%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N K + ++ GWC I + ER EM RG+ + V+Y ++ + +LH
Sbjct: 183 NTKSFNIILNGWCVIGSLRDTERVWKEMTRRGISHDAVSYASCISCYSKVRNLH------ 236
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K +R +F++M+ I+PD ++ V+H ++ + + D + M+EKGI V TY
Sbjct: 237 KVLR----LFEDMKRMKIDPDRKVYNAVIHSLAKGRCLKEAADLIKTMEEKGIIANVVTY 292
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
SV+K LC R ++A + E+++ G+ P+ +TY+ F + R ++ +K R M
Sbjct: 293 NSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTYHAFLRFLRTEEEIFELLKKMRTMG- 351
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P TY +LI F ++D V IW+ + + + D SY +LIHGL K +
Sbjct: 352 ---CNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLE 408
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
+A +Y++EM EK LLP+ ++L+TW K E E +N
Sbjct: 409 DAHKYYLEMKEKDLLPEPKI----------DEVLQTWLAGKSVFQENPSDCSGEGKNSSL 458
Query: 303 KP 304
P
Sbjct: 459 FP 460
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 13/184 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K+Y ++I+ K + A + M E+G+ NVVTYN ++ +C+ RF
Sbjct: 252 PDRKVYNAVIHSLAKGRCLKEAADLIKTMEEKGIIANVVTYNSVIKPLCK------ARRF 305
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A VF+E+ RG+ P + ++ L + R + L L M+ G PT T
Sbjct: 306 DE----ARAVFEELLQRGLCPTIQTYHAFLR-FLRTEEEIFEL--LKKMRTMGCNPTTDT 358
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C ++++ + EM NG+SP +Y A K Y +MK
Sbjct: 359 YIMLIRKFCRWRQLDNVSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAHKYYLEMK 418
Query: 182 EDDL 185
E DL
Sbjct: 419 EKDL 422
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 98/246 (39%), Gaps = 48/246 (19%)
Query: 67 NAEKVFDEMRVRGIEPDVT-----SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + DEMR G P + + I++ Y H +++ K G +
Sbjct: 95 TAWALIDEMR--GGTPGSSLVTPQTLLIMIRRYCAVHDVAKAINTFYAHKRFGFNIGLEE 152
Query: 122 YTSVVKCLCSCGRIEDAEELL----------------------------------GEMVR 147
+ S++ LC ++DAE LL EM R
Sbjct: 153 FQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGWCVIGSLRDTERVWKEMTR 212
Query: 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
G+S A +Y Y ++ + ++L+ MK + P+ YN +I +L +
Sbjct: 213 RGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKI-DPDRKVYNAVI---HSLAKGR 268
Query: 208 MVREIWNHVKGSE---LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
++E + +K E + ++ +Y +I LC+ +++ EA F E++++GL P T+
Sbjct: 269 CLKEAADLIKTMEEKGIIANVVTYNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTYH 328
Query: 265 TLYRGL 270
R L
Sbjct: 329 AFLRFL 334
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P Y LI +C+ ++D R EM E G+ P+ +Y VL++G L N +
Sbjct: 354 PTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENGISPDRSSYIVLIHG------LFLNGKL 407
Query: 62 EKTIRNAEKVFDEMRVRGIEPD 83
E +A K + EM+ + + P+
Sbjct: 408 E----DAHKYYLEMKEKDLLPE 425
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 141/272 (51%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI+G N+ A + M++RG +P++VTY ++NG+C+R
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL---- 236
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M IE +V +S V+ + +L+ M+ KG+ P V T
Sbjct: 237 ------ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLC+ GR DA LL +M+ ++P+ T++ + + A KLY +M
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PNI TY+ LI F L+R+ +++ + + ++ +Y LI+G C+ ++
Sbjct: 351 KRSI-DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV 409
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + F EM ++GL+ VT+ TL G Q+
Sbjct: 410 DKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 125/248 (50%), Gaps = 11/248 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI C R A R L +MIER + PN+VT++ L++ ++ L
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL------ 339
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AEK+++EM R I+P++ ++S +++ + + + L M K P V T
Sbjct: 340 ----VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 395
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R++ EL EM + G+ + TY + +D + A +++QM
Sbjct: 396 YNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 455
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PNI TYNIL+ ++ ++ +++ S + D+ +Y ++I G+C+ KW
Sbjct: 456 SVGVH-PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Query: 242 KEACQYFV 249
K YFV
Sbjct: 515 KMGGIYFV 522
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ SL+ G+C NRI A + +M+E G +P+ VT+ L++G+ LH N+
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGL----FLH-NKAS 200
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A + D M RG +PD+ ++ V++ + L+L+ LN M+ I V
Sbjct: 201 E-----AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++V+ LC +DA L EM GV P+ TY+ + A +L M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + PN+ T++ LI F+ ++ +++ + + ++ +Y+ LI+G C +
Sbjct: 316 ERKIN-PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EA Q MI K LP VT+ TL G ++ + L +++ + +
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 135/304 (44%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++ L+ K+N+ D+ F +M G+ N+ TYN+L+N CR + L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLS----- 130
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +M G EPD+ + + +L+ + ++ ++ ++ M E G P T
Sbjct: 131 -----LALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVT 185
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ L + +A L+ MV+ G P TY R D + A+ L +M+
Sbjct: 186 FTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKME 245
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ N+ Y+ +I D ++ ++ + ++ +Y+ LI LC +W
Sbjct: 246 AAKI-EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 304
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSE 296
+A + +MIE+ + P VTF L ++ L +L K+ +D T+ S
Sbjct: 305 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 364
Query: 297 FQNY 300
+
Sbjct: 365 INGF 368
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +LI G+CK R+D EM +RG+ N VTY L++G +
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ--------- 440
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ NA+ VF +M G+ P++ +++I+L + K ++ +++ + P +
Sbjct: 441 -ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 499
Query: 121 TYTSVVKCLCSCGR 134
TY +++ +C G+
Sbjct: 500 TYNIMIEGMCKAGK 513
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 146/293 (49%), Gaps = 16/293 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI CK RI A L M+++GV+PN+VTYN +++G C R
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLR--------- 453
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+ +F+ M G+EPD+ +++++++ Y + ++ M+ K + P +A+
Sbjct: 454 -NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS 512
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC+ GRI +ELL EM +G SP TYN + + + A+ L+RQ+
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV 572
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E P+ +T + ++ ++ M + H+ ++ +YT+LI+ LC+ +
Sbjct: 573 EG--IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSF 630
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
EA +M + P +TFE + L+Q R +KL EE I G
Sbjct: 631 GEAMLLLSKMEDNDRPPDAITFEIIIGVLLQ----RNETDKAEKLREEMIARG 679
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 138/269 (51%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + LI CK RI A+ L M +RG +P++VTYN L+ G C R ++H
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVH----- 317
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F+ M RG+EPDV ++++++ Y + ++ + K + PT+A+
Sbjct: 318 -----EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIAS 372
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC+ GRI ++LL EM + P TYN A+ + M
Sbjct: 373 YNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMM 432
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PNI TYN ++ + N +++ ++I+N + S L D+ +Y +LI+G C+ +
Sbjct: 433 KKGV-KPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMV 491
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA F EM K L+P ++ +L GL
Sbjct: 492 DEAIVLFKEMRHKNLIPDIASYNSLIDGL 520
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 136/268 (50%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ MY++LI G CK + A ++ ERG+ + VTYN L++G C R+
Sbjct: 193 PNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVG------RW 246
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + K+ E ++PD +F+I++ + + + L M ++G P + T
Sbjct: 247 QEVTQLLTKMVRE----NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVT 302
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ CS + +A EL MV+ G+ P YN Y K + AM L++++
Sbjct: 303 YNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC 362
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+L VP I +YN LI R+ V+++ + + GS D+ +Y +LI LC++ +
Sbjct: 363 NKNL-VPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRI 421
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA V M++KG+ P VT+ + G
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDG 449
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 138/315 (43%), Gaps = 35/315 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +T LI + + A L +++ G +PN+VT+N ++NG C + F
Sbjct: 88 PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
I+ A + EM ++P++ +S ++ +
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L + + E+GI TY S++ CS GR ++ +LL +MVR V P T
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT 267
Query: 157 YNCFFKEY--RGR-KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
+N GR +A G + + + E P+I TYN L+ + + + RE++
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEK----PDIVTYNALMEGYCSRENVHEARELF 323
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
N + L D+ +Y +LI G C+ + EA F E+ K L+P ++ +L GL S
Sbjct: 324 NRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNS 383
Query: 274 DMLRTWRRLKKKLDE 288
+ +KK LDE
Sbjct: 384 GRI---SHVKKLLDE 395
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y SLI G C + RI + L EM + G P+V+TYN+LL+ C+ +
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCK------TQP 560
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F+K I ++ V GI PD + ++ + K +++ D L + G P V
Sbjct: 561 FDKAISLFRQI-----VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQ 615
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ LC G +A LL +M N P A T+ R + + A KL +M
Sbjct: 616 TYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEM 675
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 101/256 (39%), Gaps = 11/256 (4%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
C+ +D A M+ P ++ LL + R +P A +F +
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGH-YPT---------AISLFTQ 80
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
++ +GI P + +F+I+++ Y + L + + G P + T+ +++ C G
Sbjct: 81 LQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGM 140
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
I A + ++ G TY A+ L ++M++ + PN+ Y+
Sbjct: 141 IFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSV-QPNLVMYS 199
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
LI + + + + + LD +Y LI G C +W+E Q +M+ +
Sbjct: 200 ALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE 259
Query: 255 GLLPQKVTFETLYRGL 270
+ P TF L L
Sbjct: 260 NVDPDDYTFNILIDAL 275
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 137/299 (45%), Gaps = 46/299 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +LI G CK +D A L EM ++G++ NV YN ++NG+C+ +
Sbjct: 466 PNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN------- 518
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A K+ EM V GI+PD +++ V+ Y R + L M ++G+ PTV T
Sbjct: 519 ---IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVT 575
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C G +ED + LLG M+ G+ P A TYN K++ R N K+Y++M+
Sbjct: 576 FNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMR 635
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ +TYNI LI G C+ +
Sbjct: 636 NQGV-APDSNTYNI-----------------------------------LIKGHCKARNL 659
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
KEA + EMIEKG +P ++ L + + + R L +++ + E N+
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNF 718
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 147/303 (48%), Gaps = 11/303 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT+LI+G+ K+ + A ++ EM+ + + P+ +TY L+ G +
Sbjct: 360 IPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGK------ 413
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + +F EM RG++PD +++ ++ VY +A + + N M + G+ P +
Sbjct: 414 ----VIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIV 469
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC G ++ A ELL EM + G+ + YN + A+KL ++M
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM 529
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P+ TY +I + L +D ++ + L + ++ +L++G C
Sbjct: 530 EVAGI-DPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGM 588
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
++ + M+EKG++P +T+ TL + + + T ++ K++ + + S N
Sbjct: 589 LEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648
Query: 301 HFK 303
K
Sbjct: 649 LIK 651
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 139/287 (48%), Gaps = 12/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I G+C + + A + + +M +G++PN TYN ++ +C+ + F
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIG-----KSF 345
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AEKV EM + I PD ++ ++H + + + + + M K I P T
Sbjct: 346 E-----AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYIT 400
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++++ G++ + + L EM+ G+ P TY Y + A L+ +M
Sbjct: 401 YTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMV 460
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PNI TY LI +D E+ + ++ L L++ Y +++G+C+
Sbjct: 461 QMGM-TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNI 519
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRTWRRLKKKLD 287
++A + EM G+ P +T+ T+ + D+ + + L++ LD
Sbjct: 520 EQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLD 566
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 25/184 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT++I +C++ ID A + L EM++RG++P VVT+NVL+NG C L +R
Sbjct: 536 PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRL 595
Query: 62 ---------------------EKTIRNA----EKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ IRN+ K++ MR +G+ PD +++I++ + +
Sbjct: 596 LGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCK 655
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + M EKG PTV +Y +++K +I +A EL EM +G+ E
Sbjct: 656 ARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEI 715
Query: 157 YNCF 160
YN F
Sbjct: 716 YNFF 719
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 14/257 (5%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
E G+ N +YN+++ +CR ++ A ++ +M R PDV S+S V+
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGK----------VKEAHRLLMQMDFRSSTPDVVSYSTVI 300
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
Y + + +L ++ M+ KG+ P TY S++ LC G+ +AE++L EM+ +
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P Y + A K + +M + P+ TY LI F ++ +
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKIS-PDYITYTTLIQGFGQGGKVIEPQN 419
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+++ + L D +YT LI C+ + A EM++ G+ P VT+ L GL
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479
Query: 272 QSDMLRTWRRLKKKLDE 288
+ L T L LDE
Sbjct: 480 KHGELDTANEL---LDE 493
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +L+ C N ++ + M +GV P+ TYN+L+ G C+
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCK--------- 655
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ ++ A ++ EM +G P VTS++ ++ + + K + + M+ G+
Sbjct: 656 -ARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGE 714
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMV 146
Y V G +E L E +
Sbjct: 715 IYNFFVDMCYEEGDVEITLNLCDEAI 740
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 134/278 (48%), Gaps = 20/278 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI + K + AE EM+ RG+ P+ +TY+ +++G C++ L
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDA---- 344
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE +F M +G PD+ +F+ ++ Y RA + + L+ M E G+ T
Sbjct: 345 ------AEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 398
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G + A++LL EMV +GV P+ T N A+++++ M+
Sbjct: 399 YTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 458
Query: 182 EDDLCV----------PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
+ + + P++ TYNILI + + E++ + + D +Y +
Sbjct: 459 KSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSV 518
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
IHGLC++ + EA Q F M K P VTF TL G
Sbjct: 519 IHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 556
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 135/281 (48%), Gaps = 22/281 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+S+I G+CK NR+D AE M +G P+++T+N L+ G CR
Sbjct: 323 IPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCR--------- 373
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K + + K+ EM G+ + +++ ++H + + + D L M G+CP V
Sbjct: 374 -AKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVV 432
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVR-----------NGVSPSAETYNCFFKEYRGRKD 169
T +++ LC G+++DA E+ M + NGV P +TYN
Sbjct: 433 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGK 492
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A +LY +M + VP+ TYN +I +R+D ++++ + ++ ++T
Sbjct: 493 FLEAEELYEEMPHRGI-VPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 551
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
LI+G C+ + + + F EM +G++ +T+ TL G
Sbjct: 552 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGF 592
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 36/236 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+ N YT+LI+G+C++ ++ A+ L EM+ GV PNVVT N LL+G+C L
Sbjct: 393 VANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALE 452
Query: 56 ---------------HPNERFEKTIRN----------------AEKVFDEMRVRGIEPDV 84
HP E ++ AE++++EM RGI PD
Sbjct: 453 MFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 512
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
+++ V+H + + + + M K P V T+T+++ C GR++D EL E
Sbjct: 513 ITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 572
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
M R G+ +A TY +R + NGA+ ++++M + I N+L G++
Sbjct: 573 MGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLW 628
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 142/300 (47%), Gaps = 21/300 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+L+ G C+ R+ A L M+E G++PN +TY +++G+C+
Sbjct: 177 PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGD------- 229
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSI-----VLHVYSRAHKPQLSLDKLNFMKE-KGI 115
T+ + V I+P+V + + +++ + + + + L M E K I
Sbjct: 230 --TVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKI 287
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P V TY +++ G+ +AEEL EM+ G+ PS TY+ + + + A
Sbjct: 288 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEH 347
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
++ M C P+I T+N LI + R+D ++ + + + L + +YT LIHG
Sbjct: 348 MFYLMATKG-CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF 406
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKK-KLDEES 290
C+ A EM+ G+ P VT TL GL + D L ++ ++K K+D ++
Sbjct: 407 CQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDA 466
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 135/292 (46%), Gaps = 22/292 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V +++L++G C +RI A +M +PNVVT+ L+NG+CR
Sbjct: 146 PTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCR---------- 191
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE-KGICPTVA 120
E + A + D M G++P+ ++ ++ + +L+ L M+E I P V
Sbjct: 192 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVV 251
Query: 121 TY-----TSVVKCLCSCGRIEDAEELLGEMV-RNGVSPSAETYNCFFKEYRGRKDANGAM 174
+ T ++ CS GR +A++LL EM+ R +SP TYN + A
Sbjct: 252 IWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAE 311
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
+LY +M + +P+ TY+ +I F NR+D ++ + D+ ++ LI G
Sbjct: 312 ELYDEMLPRGI-IPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAG 370
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
C ++ + + EM E GL+ +T+ TL G Q L + L +++
Sbjct: 371 YCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEM 422
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 138/311 (44%), Gaps = 25/311 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + L+ ++ R+D+ +M R V N ++ +L+ C + L
Sbjct: 75 LPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLP---- 130
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A F ++ G P V +FS +LH + +LD + M + P V
Sbjct: 131 ------FALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVV 180
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T+++ LC GR+ +A LL M+ +G+ P+ TY D A+ L R+M
Sbjct: 181 TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 240
Query: 181 KEDDLCVPNIHTYNI-----LIGMFMALNRMDMVREIWNH-VKGSELGLDLDSYTMLIHG 234
+E PN+ + + +I F + R +++ ++ ++ D+ +Y LI+
Sbjct: 241 EEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINA 300
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEE 289
++ K+ EA + + EM+ +G++P +T+ ++ G + + L + K +
Sbjct: 301 FVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPD 360
Query: 290 SITFGSEFQNY 300
ITF + Y
Sbjct: 361 IITFNTLIAGY 371
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 24/268 (8%)
Query: 13 GWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
G+ +I ++ A G+M+ P+V+ + L+ V R R + I K
Sbjct: 52 GFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMG------RLDVVISLHRK-- 103
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
M +R + + SF+I++ + K +L + + G PTV T+++++ LC
Sbjct: 104 --MEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVE 161
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
RI +A +L +M + V N +E R + A+ L +M ED L PN T
Sbjct: 162 DRISEALDLFHQMCKPNVVTFTTLMNGLCREGRVVE----AVALLDRMLEDGL-QPNQIT 216
Query: 193 YNILI-GM------FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
Y ++ GM ALN + + E+ +H+K + + L+ T +I+G C +W EA
Sbjct: 217 YGTIVDGMCKMGDTVSALNLLRKMEEV-SHIKPNVVIWPLERRTCMINGFCSSGRWSEAQ 275
Query: 246 QYFVEMIE-KGLLPQKVTFETLYRGLIQ 272
Q EM+E K + P VT+ L ++
Sbjct: 276 QLLQEMLERKKISPDVVTYNALINAFVK 303
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
F E +G +DA + L+ M +P++ + L+G+ + + R+D+V + ++
Sbjct: 53 FHEIKGLEDA---IDLFGDMVRSRP-LPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR 280
+ + S+T+L+ C K A F ++ + G P VTF TL GL D
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVED------ 162
Query: 281 RLKKKLD 287
R+ + LD
Sbjct: 163 RISEALD 169
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 135/268 (50%), Gaps = 10/268 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y ++I G K +R+D A R L EM++ G PNV +YN +L+G C+
Sbjct: 42 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCK---------- 91
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ NA + ++M +RG PDV S++ V++ + + + ++ M ++G P V T
Sbjct: 92 ANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVIT 151
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V C G ++ A EL+ +M G P+A TYN + + A++L+++M+
Sbjct: 152 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEME 211
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P++ TY+ ++ + ++D + + ++ +Y+ L+HGLC+ K
Sbjct: 212 ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKL 271
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA M G P VT+ T+ G
Sbjct: 272 DEATALLQRMTRSGCSPNIVTYNTIIDG 299
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 139/305 (45%), Gaps = 32/305 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
PNV Y +L+ G+C++ +D A + +M ERG PN +TYN +++G+C L
Sbjct: 147 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQL 206
Query: 57 ----------PNERFEKT-----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
P + F + + +A ++ + M +G P+V ++S +LH
Sbjct: 207 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLC 266
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A K + L M G P + TY +++ C GRI++A LL EMV G P+
Sbjct: 267 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 326
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY + A A+ L M E VPN+ TYN L+ MF + ++ ++ +
Sbjct: 327 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGY-VPNLFTYNSLLDMFCKKDEVERACQLLSS 385
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ ++ SY +I GLC+ K E +M+ +P VTF T+ M
Sbjct: 386 MIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA-----M 440
Query: 276 LRTWR 280
+T+R
Sbjct: 441 CKTYR 445
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 17/306 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y SL+ +CK + ++ A + L MI++G PNVV+YN ++ G+C+ +H
Sbjct: 357 VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH---- 412
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ ++M PD+ +F+ ++ + ++ ++ + N ++E G P +
Sbjct: 413 ------EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 466
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVR-NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY S+V LC R + AE LL EM R G SP TYN K + A KL+ Q
Sbjct: 467 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQ 526
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M D L P+ TY+I+I MD + + + +Y LI G C+
Sbjct: 527 MLSDGL-APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTG 585
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFG 294
+A + ++ KG P VTF L + LR L+ L +++T+
Sbjct: 586 NLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYN 645
Query: 295 SEFQNY 300
+ + +
Sbjct: 646 TLLKGF 651
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 25/300 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
PN+ Y ++I G CK+ RID A L EM++ G +PNVVTY VLL+ C+
Sbjct: 288 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 347
Query: 57 ----------PN--------ERFEKT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN + F K + A ++ M +G P+V S++ V+ +
Sbjct: 348 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 407
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A K + L M P + T+ +++ +C R++ A EL + +G +P+ T
Sbjct: 408 ATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVT 467
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + A L R+M C P+I TYN +I R+D +++ +
Sbjct: 468 YNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 527
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
L D +Y+++I LC+ + EA M++ G P +T+ TL G ++ L
Sbjct: 528 LSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNL 587
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 143/282 (50%), Gaps = 13/282 (4%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
++ S++ G C + A EM + P+ VTYN ++NG L ++R + I
Sbjct: 12 VHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMING------LSKSDRLDDAI 64
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
R + +EM G P+V S++ VLH + +A++ + +L L M +G P V +YT+V
Sbjct: 65 R----LLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTV 120
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ LC ++++A ++ +M++ G P+ TY + D +GA++L R+M E
Sbjct: 121 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 180
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS-ELGLDLDSYTMLIHGLCEKQKWKEA 244
PN TYN ++ + ++D +++ ++ S D+ +Y+ ++ L + K +A
Sbjct: 181 -RPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
C+ M+ KG P VT+ +L GL ++ L L +++
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 12/243 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMI-ERGVEPNVVTYNVLLNGVCRRASLHPNER 60
PN+ Y SL++G CK R D AE L EM ++G P+++TYN +++G+C+
Sbjct: 463 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCK--------- 513
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K + A K+F +M G+ PD ++SIV+ + + + L M + G P
Sbjct: 514 -SKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAI 572
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ C G ++ A E+L ++ G P T++ F R A +L M
Sbjct: 573 TYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 632
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L VP+ TYN L+ F +R + +++ ++ D +YT L+ L +K+
Sbjct: 633 LRAGL-VPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKS 691
Query: 241 WKE 243
+K+
Sbjct: 692 YKD 694
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 2/179 (1%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M KG+ + S+++ LC G+ DA EM + P + TYN
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
+ A++L +M ++ PN+ +YN ++ F NR++ + + D+ SYT
Sbjct: 60 LDDAIRLLEEMVDNGF-APNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYT 118
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+I+GLC+ + EAC+ +MI++G P +T+ TL G + L L +K+ E
Sbjct: 119 TVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE 177
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 101 QLSLDKLNFMKEKGICP-TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC 159
Q S L+F + CP TY +++ L R++DA LL EMV NG +P+ +YN
Sbjct: 25 QCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNT 84
Query: 160 FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
+ A+ L QM C P++ +Y +I L+++D + + +
Sbjct: 85 VLHGFCKANRVENALWLLEQMVMRG-CPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQR 143
Query: 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 279
++ +Y L+ G C A + +M E+G P +T+ + GL L +
Sbjct: 144 GCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSA 203
Query: 280 RRLKKKLDEE 289
+L K+++E
Sbjct: 204 LQLFKEMEES 213
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 70/161 (43%), Gaps = 7/161 (4%)
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
M R G+ A + + + A+ +R+M + C P+ TYN +I +
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK--TCPPDSVTYNTMINGLSKSD 58
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
R+D + + + ++ SY ++HG C+ + + A +M+ +G P V++
Sbjct: 59 RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYT 118
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDEES-----ITFGSEFQNY 300
T+ GL + D + R+ K+ + IT+G+ +
Sbjct: 119 TVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 159
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 143/271 (52%), Gaps = 12/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K Y+ L+ GW K + EM++ G +P++VTY ++++ +C+
Sbjct: 204 PDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGR------- 256
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A V +M RG +P +S+++H Y + + ++ M++ GI P V
Sbjct: 257 ---VEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVV 313
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V C + E+A ++ +M +G++P++ T+N + + A +++R+M
Sbjct: 314 YNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMI 373
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P+ TY ++I MF + ++M ++W +++ + + ++++LI+GLC+K +
Sbjct: 374 KR--CQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEV 431
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+AC +MIEKG+ P TF L + L++
Sbjct: 432 SQACVLLEDMIEKGIRPPGSTFGKLRQLLLK 462
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 135/287 (47%), Gaps = 17/287 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV+ + ++ + + + D A M + GV PN+ +N LL +C+
Sbjct: 136 NVETFGIIMRKYARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCK----------S 185
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K +R A+++FD+M R PD ++SI+L + +A + + M + G P + TY
Sbjct: 186 KNVRKAQEIFDKMNGR-FNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTY 244
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+V LC GR+E+A ++ +M G P+ Y+ Y A+ + M++
Sbjct: 245 GIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEK 304
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D + VP++ YN L+ F + + + + + ++G + + ++ ++++ L K
Sbjct: 305 DGI-VPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDD 363
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSD----MLRTWRRLKKK 285
EA + F MI++ P T+ + + ++D L+ W+ ++ K
Sbjct: 364 EAYRVFRRMIKR-CQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLK 409
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +Y +L+ +CK+ + + A R + +M G+ PN T+N++LN + SL ++
Sbjct: 308 VPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIILN---KLISLGKDD- 363
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +VF M ++ +PD ++++++ ++ +++L +M+ K P++
Sbjct: 364 ------EAYRVFRRM-IKRCQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQFLPSMH 416
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKD 169
T++ ++ LC G + A LL +M+ G+ P T+ KE GRKD
Sbjct: 417 TFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKE--GRKD 467
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 95/193 (49%), Gaps = 5/193 (2%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
MR G+ +V +F I++ Y+RA K ++ N M++ G+ P +A + S++ LC
Sbjct: 129 MRREGV-VNVETFGIIMRKYARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCKSKN 187
Query: 135 IEDAEELLGEMVRNG-VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
+ A+E+ +M NG +P A+TY+ + + + ++Y +M D C P+I TY
Sbjct: 188 VRKAQEIFDKM--NGRFNPDAKTYSILLEGWGKAPNLPKMREVYSEML-DAGCQPDIVTY 244
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
I++ R++ + + Y++L+H + + ++A F++M +
Sbjct: 245 GIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEK 304
Query: 254 KGLLPQKVTFETL 266
G++P V + L
Sbjct: 305 DGIVPDVVVYNAL 317
>gi|357508583|ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499595|gb|AES80798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 152/289 (52%), Gaps = 25/289 (8%)
Query: 3 NVKMYTSLIYGWCK-INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+ K + ++ GWC I AER EM +R ++ +VV+Y +++ + + L+
Sbjct: 271 DTKSFNIILNGWCNLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYSKSSKLY----- 325
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++F++M+ R I PD ++ V+ ++ + +++ + M++ + P T
Sbjct: 326 -----RVLQLFEQMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAIT 380
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++K LC +I++A+E+ M+ G+SPS T++ FF+ R +++ +L +MK
Sbjct: 381 YNSLIKPLCKARKIDEAKEIFNVMLERGISPSIRTFHAFFRILRVKEEV---FELLDKMK 437
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P I TY +LI F ++D V+ IWN ++ +G D SY +LIHGL K
Sbjct: 438 ELG-CNPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSSYIVLIHGLFLNCKV 496
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+EA +Y++EM EKG LP+ T ML+ W ++ D ++
Sbjct: 497 EEAYKYYIEMQEKGFLPEPKT----------ESMLQAWLSGRQVTDSQA 535
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K+Y ++I+ K + A + +M + V P+ +TYN L+ +C+
Sbjct: 341 PDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCK---------- 390
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I A+++F+ M RGI P + +F + + LDK MKE G PT+ T
Sbjct: 391 ARKIDEAKEIFNVMLERGISPSIRTFHAFFRILRVKEEVFELLDK---MKELGCNPTIET 447
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C ++++ + + M +G+ +Y A K Y +M+
Sbjct: 448 YIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSSYIVLIHGLFLNCKVEEAYKYYIEMQ 507
Query: 182 E 182
E
Sbjct: 508 E 508
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y SLI CK +ID A+ M+ERG+ P++ T++ F
Sbjct: 376 PDAITYNSLIKPLCKARKIDEAKEIFNVMLERGISPSIRTFHA----------------F 419
Query: 62 EKTIRNAEKVF---DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ +R E+VF D+M+ G P + ++ +++ + R + N M+E GI
Sbjct: 420 FRILRVKEEVFELLDKMKELGCNPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHD 479
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168
++Y ++ L ++E+A + EM G P +T + GR+
Sbjct: 480 RSSYIVLIHGLFLNCKVEEAYKYYIEMQEKGFLPEPKTESMLQAWLSGRQ 529
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 145/291 (49%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT L+ CK + A + L EM ++G P++VTYNV++NG+C+
Sbjct: 192 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ--------- 242
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + +A + + G EP+ S++IVL A + + + + + M +KG P V
Sbjct: 243 -EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 301
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++ LC G +E A E+L ++ + G SP++ +YN + +K + AM M
Sbjct: 302 TFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 361
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C P+I +YN L+ +D+ E+ + +K L SY +I GL + K
Sbjct: 362 VSRG-CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 420
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
KEA + EM+ KGL P +T+ T+ GL + D + R K+ + I
Sbjct: 421 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 471
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 137/285 (48%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ G C R + AE +GEM ++G PNVVT+N+L++ +CR+ + P
Sbjct: 263 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEP---- 318
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +V +++ G P+ S++ +LH + + K ++ L+ M +G P + +
Sbjct: 319 ------ALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 372
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G ++ A ELL ++ G +P +YN A++L +M
Sbjct: 373 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 432
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I TY+ + +R++ + V+ + + Y +I GLC++++
Sbjct: 433 SKGL-QPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 491
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A F MI G +P + T+ L GL +++ R L +L
Sbjct: 492 HSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 536
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 131/271 (48%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++ G C+ R+D A FL + G EPN V+YN++L G+C ER+
Sbjct: 228 PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT------AERW 281
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +AE++ EM +G P+V +F++++ R + +L+ L + + G P +
Sbjct: 282 E----DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLS 337
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C +++ A L MV G P +YN + + A++L Q+K
Sbjct: 338 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 397
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C P + +YN +I + E+ N + L D+ +Y+ + GLC + +
Sbjct: 398 -DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 456
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++A + F ++ + G+ P V + + GL +
Sbjct: 457 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 487
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 111/307 (36%), Gaps = 84/307 (27%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ G+C ++D A R+ E R VE + T + L+ G+C R
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGR------- 175
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA V DEM R PDV T
Sbjct: 176 ---TANALAVLDEMLRRRCVPDVV-----------------------------------T 197
Query: 122 YT-----------------------------------SVVKCLCSCGRIEDAEELLGEMV 146
YT VV +C GR++DA E L +
Sbjct: 198 YTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP 257
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G P+ +YN K + A +L +M + C PN+ T+N+LI +
Sbjct: 258 SYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG-CPPNVVTFNMLISFLCRKGLV 316
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ E+ + + SY L+H C+++K +A + M+ +G P V++ TL
Sbjct: 317 EPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTL 376
Query: 267 YRGLIQS 273
L +S
Sbjct: 377 LTALCRS 383
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G +++A L+G R P A T K+ A+G R++ C P++
Sbjct: 81 GELDEALRLVGSARR----PDAGTCAALIKKL----SASGRTAEARRVLA--ACGPDVMA 130
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT--MLIHGLCEKQKWKEACQYFVE 250
YN ++ + ++D R W +E ++ D+YT LI GLC + + A E
Sbjct: 131 YNAMMAGYCGAGQVDAARR-WC----AERAVERDAYTCDTLIRGLCGRGRTANALAVLDE 185
Query: 251 MIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
M+ + +P VT+ L + +++ K LDE
Sbjct: 186 MLRRRCVPDVVTYTILLEATCKRS---GYKQAMKLLDE 220
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 141/272 (51%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y ++I+G C+ N D A FL EM ER V P+V TYN+L++G+C+ +
Sbjct: 224 PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKAS-------- 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
KT + +E + EM RG+ PD +F+ ++ +A K + + L M E+ P+ T
Sbjct: 276 -KTDKASE-MLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCT 333
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC ++ A++L+ E V +G P TY+ R + A +L ++M
Sbjct: 334 YNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS 393
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN+ TYN LI ++ + E+ + S D+ +YT+++ GLC++ +
Sbjct: 394 GKG-CTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRL 452
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+A + M+++G P +T+ L GL ++
Sbjct: 453 DKALKMVEGMLKRGCTPSVITYTALMEGLCRT 484
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 41/297 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+ L G CK RID A + EM +G PN+VTYN L++G+C+ + +
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKAS------K 416
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK A ++ + + G PDV +++I++ + + +L + M ++G P+V
Sbjct: 417 TEK----AYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVI 472
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKDA------ 170
TYT++++ LC GR+++A + EMV + A Y N + K R ++
Sbjct: 473 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI 532
Query: 171 ---------NGAMKLY-RQMKEDDL-----------CVPNIHTYNILIGMFMALNRMDMV 209
N M Y ++ + D++ CVPNI TYNI++ ++D
Sbjct: 533 RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA 592
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + D+ SY ++I GL + K KEA Q +MI+ G+ P VT+ TL
Sbjct: 593 FPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 649
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 13/285 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + +Y +L+ G+CK R+D +M RG PN+ TYN++++G+C+ + +E F
Sbjct: 536 PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKV--DEAF 593
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ M G PDV S++I++ +A KP+ + L+ M + GI P T
Sbjct: 594 --------PFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVT 645
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R +DA +L M++ GV P TYN A +L +M
Sbjct: 646 YNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 705
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ V TYN +I + + +H+ G + + +Y + I LC++ +
Sbjct: 706 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRL 765
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EA EM L +V++ T+ GL +++ L +L +++
Sbjct: 766 DEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREM 807
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 134/271 (49%), Gaps = 14/271 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +LI G CK +D A+ + E + G P+VVTY++L +G+C+R + +E F
Sbjct: 329 PSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRI--DEAF 386
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + EM +G P++ +++ ++ +A K + + + L + G P V T
Sbjct: 387 E--------LVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVT 438
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +V LC GR++ A +++ M++ G +PS TY + + A ++++M
Sbjct: 439 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 498
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C + Y L+ + +R +++ + ++G+ +D Y L+ G C++ +
Sbjct: 499 SKD-CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALMDGYCKEGRL 554
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
E F +M +G +P T+ + GL +
Sbjct: 555 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCK 585
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 15/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +I C++N+ID A L + RG +P V Y +L C+ L
Sbjct: 158 PDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRL------ 211
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A ++F + PD +++ ++H + R + +L+ L M E+ + P V T
Sbjct: 212 ----KDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFT 263
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC + + A E+L EMV GV+P T+N A L M
Sbjct: 264 YNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMA 323
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + C P+ TYN LI +D +++ + S D+ +Y++L GLC++ +
Sbjct: 324 ERN-CRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRI 382
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA + EM KG P VT+ TL GL ++
Sbjct: 383 DEAFELVKEMSGKGCTPNLVTYNTLIDGLCKA 414
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 124/275 (45%), Gaps = 15/275 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V +YT L +CK R+ A E+ P+ + YN +++G CR+ F
Sbjct: 193 PEVSVYTILTRAFCKTGRLKDAL----EIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEF 248
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K EM R + PDV +++I++ +A K + + L+ M ++G+ P T
Sbjct: 249 LK----------EMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVT 298
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++ LC G+ E A LL M PS TYN +++ + A L +
Sbjct: 299 FNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFV 358
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
VP++ TY+IL R+D E+ + G +L +Y LI GLC+ K
Sbjct: 359 SSGF-VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKT 417
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
++A + ++ G +P VT+ + GL + L
Sbjct: 418 EKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRL 452
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 132/279 (47%), Gaps = 20/279 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT ++ G CK R+D A + + M++RG P+V+TY L+ G+CR
Sbjct: 433 VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGR------ 486
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY---SRAHKPQLSLDKLNFMKEKGICP 117
+ A +F EM + D ++ +++ Y SR + Q +D + +G P
Sbjct: 487 ----VDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI-----RGT-P 536
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ Y +++ C GR+++ + +M G P+ +TYN + A
Sbjct: 537 YIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFL 596
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
M CVP++ +YNI+I ++ R++ + + + + D +Y L+ C+
Sbjct: 597 ESMHSAG-CVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCK 655
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
++++ +A MI+ G+ P VT+ TL GL Q++ L
Sbjct: 656 EERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRL 694
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 140/339 (41%), Gaps = 80/339 (23%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+K Y ++ G CK ++D A FL M G P+VV+YN++++G+ + + P E
Sbjct: 570 VPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKAS--KPKE- 626
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +V D+M GI PD +++ ++ + + + ++ L M + G+ P
Sbjct: 627 -------ARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 679
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-------------------------------- 148
TY +++ L R+ DA EL+ EM+RN
Sbjct: 680 TYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDH 739
Query: 149 ----GVSPSAETYNCFFKEY--RGRKDANGAM---------------------------- 174
GV + TYN F GR D ++
Sbjct: 740 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDR 799
Query: 175 --KLYRQMKE-DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
KL R+M LC+ + HT+N+LI F R+D + + + +Y M+
Sbjct: 800 ASKLAREMVAVKGLCITS-HTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMV 858
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
I LC+ K +A + F EM +G++ V++ L GL
Sbjct: 859 ITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGL 897
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 129/280 (46%), Gaps = 37/280 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +L+ +CK R D A L MI+ GV+P+ VTYN L++G+ + L
Sbjct: 641 PDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYEL 700
Query: 62 --------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY- 94
E ++ A + D M G+E + +++I +
Sbjct: 701 MHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLC 760
Query: 95 --SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR-NGVS 151
R + L +++ ++++ +YT+V+ LC +++ A +L EMV G+
Sbjct: 761 KEGRLDEASSLLSEMDTLRDE------VSYTTVIIGLCKAEQLDRASKLAREMVAVKGLC 814
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
++ T+N + K + A+ L M + C P++ TYN++I L+++D E
Sbjct: 815 ITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRG-CSPSVITYNMVITCLCKLDKVDKAWE 873
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251
+++ + + SYT+LI+GLC + + KEA Q EM
Sbjct: 874 LFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 8/218 (3%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+F+ M G PD ++ +V+ + ++ + L+ K +G P V+ YT + + C
Sbjct: 147 MFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFC 206
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
GR++DA E+ RN SP A YN + + D +GA++ ++M E + P++
Sbjct: 207 KTGRLKDALEIF----RNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKV-APDV 261
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
TYNILI ++ D E+ + + + D ++ ++ GLC+ K++ A
Sbjct: 262 FTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAV 321
Query: 251 MIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
M E+ P T+ TL GL + + R K +DE
Sbjct: 322 MAERNCRPSCCTYNTLISGLCKQ---QNVDRAKDLVDE 356
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 23/201 (11%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF---EK 63
Y ++I CK + A + M GVE N VTYN+ ++ +C+ L
Sbjct: 717 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 776
Query: 64 TIRN-------------------AEKVFDEM-RVRGIEPDVTSFSIVLHVYSRAHKPQLS 103
T+R+ A K+ EM V+G+ +F++++ +++ + +
Sbjct: 777 TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEA 836
Query: 104 LDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163
L L M ++G P+V TY V+ CLC +++ A EL EM G+ S+ +Y
Sbjct: 837 LTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYG 896
Query: 164 YRGRKDANGAMKLYRQMKEDD 184
G+ A+++ +M D
Sbjct: 897 LCGQGRGKEALQVLEEMASSD 917
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 143/290 (49%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++++G C + +++ A R +M ++G +P+VV YN +++ +C+
Sbjct: 336 PDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCK---------- 385
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + +A + EM RGI P+ ++S +LH + + + M + + P T
Sbjct: 386 DRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLT 445
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ +V LC G + +A + M GV P+ TYN Y R N A K++ M
Sbjct: 446 FSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMV 505
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P++H+YNILI + RMD + + + +L + +Y ++ GLC +
Sbjct: 506 GKG-CAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRL 564
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+A + F +M G+LP +T+ L GL + L +L K + E+ +
Sbjct: 565 LDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKL 614
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 146/295 (49%), Gaps = 22/295 (7%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI C++N +D A G+M + G++P+V+T+ L+NGVC E I+ A
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCN----------EGKIKVAV 183
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
++++EM G EPDV S++ +++ + +++ M++ G P V TY +++ L
Sbjct: 184 ELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSL 243
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C + DA + L EMV G+ P A TYN N A +L+++M+++ C P+
Sbjct: 244 CKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNG-CKPD 302
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+ TYNI+I ++ + + + + D+ +YT ++HGLC + EA + F
Sbjct: 303 VVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFK 362
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
+M +KG P V + T+ L K +L +++ F SE + P
Sbjct: 363 KMEQKGCKPDVVAYNTIIDSLC-----------KDRLVNDAMEFLSEMVDRGIPP 406
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 150/344 (43%), Gaps = 59/344 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I CK ++ A FL EM+ RG+ P+ +TYN +++G+C L+ R
Sbjct: 231 PNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRL 290
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
++ + +A EM +GI PDV +++ +LH
Sbjct: 291 FKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCY 350
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ ++ M++KG P V Y +++ LC + DA E L EMV G+ P+A T
Sbjct: 351 LGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVT 410
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKE--------------DDLCV--------------- 187
Y+ + + A +L+++M D LC
Sbjct: 411 YSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMT 470
Query: 188 -----PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
PNI+TYN L+ + +M+ R+++ + G DL SY +LI+G C ++
Sbjct: 471 EKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMD 530
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A +M K L P VT+ T+ +GL L + L KK+
Sbjct: 531 KAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKM 574
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 46/325 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +T+LI G C +I +A EM+ G EP+V++YN L+NG+C + +
Sbjct: 161 PDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTN----- 215
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A VF +M G +P+V +++ ++ + ++D L+ M +GI P T
Sbjct: 216 -----MAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAIT 270
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE-YRGR--KDA-------- 170
Y S+V LC G++ +A L M +NG P TYN Y+ R DA
Sbjct: 271 YNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMV 330
Query: 171 ------------------------NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
N A++L+++M++ C P++ YN +I +
Sbjct: 331 DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKG-CKPDVVAYNTIIDSLCKDRLV 389
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ E + + + + +Y+ ++HG C + EA Q F EM+ + ++P +TF L
Sbjct: 390 NDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSIL 449
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESI 291
GL Q M+ R + + + E+ +
Sbjct: 450 VDGLCQEGMVSEARWVFETMTEKGV 474
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 136/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I CK ++ A FL EM++RG+ PN VTY+ +L+G C L
Sbjct: 371 PDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLD----- 425
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F EM R + P+ +FSI++ + + M EKG+ P + T
Sbjct: 426 -----EATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYT 480
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C ++ +A ++ MV G +P +YN Y + + A L QM
Sbjct: 481 YNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMS 540
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L PN TYN ++ + R+ +E++ + S + L +Y++L++GLC+
Sbjct: 541 VKKL-TPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHL 599
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EA + F M EK L P + + L G+ L + L KL + I
Sbjct: 600 DEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGI 649
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 130/249 (52%), Gaps = 13/249 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN ++ L+ G C+ + A M E+GVEPN+ TYN L+NG C R ++
Sbjct: 440 MPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMN---- 495
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVF+ M +G PD+ S++I+++ Y + + + L M K + P
Sbjct: 496 ------EARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTV 549
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++K LC GR+ DA+EL +M +G+ P+ TY+ + A+KL++ M
Sbjct: 550 TYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSM 609
Query: 181 KEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
KE L P+I Y ILI GMF+ ++++ + +++ + + +Y ++I GL ++
Sbjct: 610 KEKKL-EPDIILYTILIEGMFIG-GKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEG 667
Query: 240 KWKEACQYF 248
EA + F
Sbjct: 668 LSDEAYELF 676
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 150/294 (51%), Gaps = 22/294 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+++++G+C + ++D A + EM+ R V PN +T+++L++G+C+
Sbjct: 406 PNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQ---------- 455
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A VF+ M +G+EP++ +++ +++ Y K + M KG P + +
Sbjct: 456 EGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHS 515
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE--YRGRKDANGAMKLYRQ 179
Y ++ C+ R++ A+ LL +M ++P+ TYN K Y GR A +L+++
Sbjct: 516 YNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGR--LLDAQELFKK 573
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + +P + TY+IL+ +D +++ +K +L D+ YT+LI G+
Sbjct: 574 MCSSGM-LPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGG 632
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-------DMLRTWRRLKKKL 286
K + A F ++ G+ P T+ + +GL++ ++ R W+ +K +
Sbjct: 633 KLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMKHNV 686
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 108/219 (49%), Gaps = 1/219 (0%)
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
++M + G+ V S +I+++ R + ++ M + GI P V T+T+++ +C+
Sbjct: 117 NQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNE 176
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G+I+ A EL EMVR+G P +YN + N A+ ++++M+++ C PN+ T
Sbjct: 177 GKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNG-CKPNVVT 235
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
YN +I ++ + + + G + D +Y ++HGLC + EA + F M
Sbjct: 236 YNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRME 295
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ G P VT+ + L + ++ ++ ++ I
Sbjct: 296 QNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGI 334
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 98/240 (40%), Gaps = 1/240 (0%)
Query: 51 RRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFM 110
+ N ++ +A F M P + F L ++ + + N M
Sbjct: 60 KNGGFASNSSNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQM 119
Query: 111 KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
G+ TV + ++ CLC ++ A + G+M + G+ P T+
Sbjct: 120 DLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKI 179
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
A++LY +M P++ +YN LI +M ++ ++ + ++ +Y
Sbjct: 180 KVAVELYNEMVRSGH-EPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNT 238
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+I LC+ + +A + EM+ +G+ P +T+ ++ GL L RL K++++
Sbjct: 239 IIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNG 298
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 159/332 (47%), Gaps = 40/332 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVE--PNVVTYNVLLNGVCRRASLHPN 58
+PNV Y+ LI G CK+ RID A + EM + + PN++TYN L+G+C+++
Sbjct: 104 VPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEA 163
Query: 59 ERFEKTIRN---------------------------AEKVFDEMRVRGIEPDVTSFSIVL 91
+++R+ A VFD+M G P+V +++ ++
Sbjct: 164 CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALV 223
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ +A K + + + M +KG+ P V TY+ +V C R+++A ELL M G +
Sbjct: 224 NGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT 283
Query: 152 PSA-----ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
P+ T+N + A L+ +M +L P++ T+ LI ++
Sbjct: 284 PNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL-QPDVMTFGALIDGLCKAGQV 342
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ R+I + + + ++ +Y L+HGLC+ + +EACQ+ EM+ G +P +T+ +L
Sbjct: 343 EAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSL 402
Query: 267 YRGLIQS----DMLRTWRRLKK-KLDEESITF 293
L ++ D L+ LK D +++T+
Sbjct: 403 VYALCRASRTDDALQLVSELKSFGWDPDTVTY 434
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 136/294 (46%), Gaps = 22/294 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNV-----VTYNVLLNGVCRRASLH 56
P+V Y+ L+ +CK +R+D A L M RG PNV VT+N+L+ G C+ +
Sbjct: 249 PDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGN-- 306
Query: 57 PNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
FE+ A +F+EM + ++PDV +F ++ +A + + + D L+ M G+
Sbjct: 307 ----FEQ----ASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP 358
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P V TY ++V LC GRIE+A + L EMV +G P + TY + A++L
Sbjct: 359 PNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQL 418
Query: 177 YRQMKE---DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
++K D P+ TYNIL+ + + + + G D ++
Sbjct: 419 VSELKSFGWD----PDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFS 474
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
GL + ++ KG+LP T ++ + +S L + + K+ +
Sbjct: 475 GLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 138/290 (47%), Gaps = 20/290 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI CK ++ A R G+M RG PNVVTY+VL+NG+C+
Sbjct: 70 PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGR------- 122
Query: 62 EKTIRNAEKVFDEMRVRGIE--PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG--ICP 117
I A ++ EM + + P++ +++ L + + + + +++ + P
Sbjct: 123 ---IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 179
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T+++++ LC CG+I++A + +M+ G P+ TYN A +
Sbjct: 180 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 239
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG-----SELGLDLDSYTMLI 232
M + + P++ TY++L+ F +R+D E+ + + + L D ++ +LI
Sbjct: 240 ESMVDKGV-TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILI 298
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
G C+ +++A F EM+ K L P +TF L GL ++ + R +
Sbjct: 299 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 348
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 14/274 (5%)
Query: 4 VKMYTSLIYGWCKINRIDMA-ERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
V Y ++ C+ A E F GEM GV P +VTYN ++NG+C+ L
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGA----- 55
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++F+E+ RG PDV +++ ++ +A + + M +G P V TY
Sbjct: 56 -----GMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTY 110
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNG--VSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ ++ LC GRI++A EL+ EM R V P+ TYN F + A +L R +
Sbjct: 111 SVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL 170
Query: 181 KEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
++ L V P+ T++ LI ++D +++ + ++ +Y L++GLC+
Sbjct: 171 RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKAD 230
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
K + A M++KG+ P +T+ L ++
Sbjct: 231 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 264
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 120/258 (46%), Gaps = 14/258 (5%)
Query: 39 VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
V YN++L +CR T R E EM G+ P + +++ +++ +++
Sbjct: 1 VADYNIVLQSLCRAG---------DTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSN 51
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
++ + E+G P V TY +++ LC G +E+A L G+M G P+ TY+
Sbjct: 52 DLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYS 111
Query: 159 CFFKEYRGRKDANGAMKLYRQM--KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+ A +L ++M K D+ +PNI TYN + + E+ +
Sbjct: 112 VLINGLCKVGRIDEARELIQEMTRKSCDV-LPNIITYNSFLDGLCKQSMTAEACELMRSL 170
Query: 217 KGSELGLDLD--SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ L + D +++ LI GLC+ + EAC F +MI G +P +T+ L GL ++D
Sbjct: 171 RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKAD 230
Query: 275 MLRTWRRLKKKLDEESIT 292
+ + + + ++ +T
Sbjct: 231 KMERAHAMIESMVDKGVT 248
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y SL+Y C+ +R D A + + E+ G +P+ VTYN+L++G L + +
Sbjct: 393 VPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG------LWKSGK 446
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ I V +EM +G +PD +F+ R+ +++ L + KG+ P
Sbjct: 447 TEQAI----TVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDAT 502
Query: 121 TYTSVVKCLCSCGRIEDAEELLGE 144
T +S++ +C G+++D + ++ E
Sbjct: 503 TCSSILDWVCRSGKLDDVKAMIKE 526
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 148/296 (50%), Gaps = 23/296 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +L GWC++ A L +M+E G+ P TYN++L G R L
Sbjct: 208 PDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQL------ 261
Query: 62 EKTIRNAEKVFDEMRVRG-----IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
++A F +M+ RG +PDV S++ VLH A + + + M +G
Sbjct: 262 ----QHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCT 317
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P++ATY ++++ C G +EDA + +M+R G P+ TY + + AMKL
Sbjct: 318 PSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKL 377
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV-KGSELGLDLDSYTMLIHGL 235
+MK + C PN+ TYN+LIG ++ ++ + KG E + D+Y ++I +
Sbjct: 378 LDKMKREG-CEPNVQTYNVLIGYLFEEGDIEKALHLFETMSKGEECLPNQDTYNIIISAM 436
Query: 236 CEKQKWKE---ACQYFVEMIEKGLLPQKVTFETLYRGLI---QSDMLRTWRRLKKK 285
+++ ++ A + VEM+++G LP++ F + GL+ ++ R R+++K
Sbjct: 437 FVRKRAEDMAVAARMVVEMVDRGYLPRRFMFNRVLNGLMLTGNQELSRELLRMQEK 492
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 13/241 (5%)
Query: 59 ERFEKTIR---NAEKVFDEM-RVRGIEPDVTSFSIVLH--VYSRAHKPQLSLDKLNFMKE 112
ERF + R +A + F + R G+ D+ F+ +L V SR SL + E
Sbjct: 147 ERFAVSHRRPDHAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGKAASLVR---ALE 203
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
+ P TY ++ C A ++L +MV +G++P+ TYN K +
Sbjct: 204 RRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQH 263
Query: 173 AMKLYRQMKE----DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
A + QMK+ D+ C P++ +Y ++ ++D R++++ + + +Y
Sbjct: 264 AWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATY 323
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
LI C+K ++A F +MI KG +P VT+ L RGL + + +L K+
Sbjct: 324 NALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKR 383
Query: 289 E 289
E
Sbjct: 384 E 384
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 16/147 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV YT LI G C +ID A + L +M G EPNV TYNVL+ +
Sbjct: 352 IPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFE--------- 402
Query: 61 FEKTIRNAEKVFDEMRVRGIE--PDVTSFSIVLH---VYSRAHKPQLSLDKLNFMKEKGI 115
E I A +F+ M +G E P+ +++I++ V RA ++ + M ++G
Sbjct: 403 -EGDIEKALHLFETMS-KGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGY 460
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELL 142
P + V+ L G E + ELL
Sbjct: 461 LPRRFMFNRVLNGLMLTGNQELSRELL 487
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 147/313 (46%), Gaps = 26/313 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y +L+ G C+ +++A++ EMI G+ P++VTY +L+NG C+ SL + F
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466
Query: 62 ----------------------EKTIRNAEKVF---DEMRVRGIEPDVTSFSIVLHVYSR 96
E + + + F +EM +G PD+ +++V+ +
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + L M G+ P TYTS++ GR+ E+ EM+ G++PS T
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVT 586
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + G+ A + +M+E + +PN+ TYN LI + RMD + +
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQEKGI-LPNVITYNSLINGLCKVRRMDQAYNFFAEM 645
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + SYT+LI+ C W+EA + +M+++G+ P T L + L + L
Sbjct: 646 VEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL 705
Query: 277 RTWRRLKKKLDEE 289
+ R+L+ LD E
Sbjct: 706 QAVRQLESLLDSE 718
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 132/303 (43%), Gaps = 44/303 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y S IYG CK+ R+ A + L +M+ + P+VV+YN L+ G CR +L
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLM----- 391
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +FDE+R + P + +++ +L R + +++ M +GI P + T
Sbjct: 392 -----KAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVT 446
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +V C G + A+E EM+ G+ + Y D + A L +M
Sbjct: 447 YTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEML 506
Query: 182 E--------------DDLC--------------------VPNIHTYNILIGMFMALNRMD 207
D LC +P+ TY +I + R+
Sbjct: 507 AKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLR 566
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
REI+ + L + +YT+LIHG K + + A YF EM EKG+LP +T+ +L
Sbjct: 567 KGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLI 626
Query: 268 RGL 270
GL
Sbjct: 627 NGL 629
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 125/255 (49%), Gaps = 11/255 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y +L+ +CK ++ L EM RG PN VTYNVL+NG+ ++ F
Sbjct: 232 PTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKG------EF 285
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A+ + EM G++ +++ +++ Y +L M KG PTVAT
Sbjct: 286 EQ----AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVAT 341
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S + LC GR+ DA + L +M+ N + P +YN Y + A L+ +++
Sbjct: 342 YNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELR 401
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P I TYN L+ +++ +++ + + D+ +YT+L++G C+
Sbjct: 402 SIYL-FPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSL 460
Query: 242 KEACQYFVEMIEKGL 256
A ++F EM+ +GL
Sbjct: 461 SMAQEFFDEMLHEGL 475
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 11/290 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+VK+ LI+ + K + ++ +MI+ + P+V N +L + R +
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRIL----------RDK 212
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A +V+ M GI+P + +++ +L Y + K Q LD L+ M+ +G P TY
Sbjct: 213 DLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTY 272
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ L G E A+ L+GEM++ G+ SA TYN Y + A+ L +M
Sbjct: 273 NVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVL 332
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P + TYN I L RM + + + + L D+ SY LI+G C
Sbjct: 333 KG-ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLM 391
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A F E+ L P VT+ TL GL + L ++LK ++ E I
Sbjct: 392 KAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y SLI G CK+ R+D A F EM+E+G+ PN +Y +L+N C +
Sbjct: 616 LPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW----- 670
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
+ A ++ +M RG++PD + S +L + K Q
Sbjct: 671 -----QEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ 706
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 146/296 (49%), Gaps = 11/296 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT L+ G+CK ++ A + M++RGV PNVVTY L +G+C++ ++
Sbjct: 437 YTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGD----------VQ 486
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++ EM +G+E + +++ +++ +A ++ + M G+ P V TYT+++
Sbjct: 487 AANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLI 546
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G ++ A +LL EM+ NG+ P+ TYN + G KL M E ++
Sbjct: 547 DALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNI- 605
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN TYN L+ + N M EI+ + + + ++Y +LI G C+ + KEA
Sbjct: 606 HPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQY 665
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
+ EMIEKG ++ L R L + R+L + +E T + N++
Sbjct: 666 FHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 136/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+L G CK + A L EM +G+E N TYN L+NG+C+ L
Sbjct: 467 PNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLD----- 521
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +M G++PDV +++ ++ ++ + + D L M + GI PT+ T
Sbjct: 522 -----QAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVT 576
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C GR+E ++LL M+ + P+A TYN K+Y + ++Y+ M
Sbjct: 577 YNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMC 636
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ PN +TYNILI M + N + L SY+ LI L +K+K+
Sbjct: 637 SRNV-EPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKF 695
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EA + F +M ++G + + D L L +L E SI
Sbjct: 696 VEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASI 745
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 11/263 (4%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+YT+++ G+C + A R+ EM +G+ + VTY L+NG+CR L
Sbjct: 366 VYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGEL---------- 415
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+ AEKV EM R ++ D ++++++ Y + K + N M ++G+ P V TYT++
Sbjct: 416 KEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTAL 475
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
LC G ++ A ELL EM G+ +A TYN + AM+ M L
Sbjct: 476 SDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGL 535
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
P+++TY LI +D ++ + + + + +Y +L++G C + +
Sbjct: 536 -KPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGK 594
Query: 246 QYFVEMIEKGLLPQKVTFETLYR 268
+ M+EK + P T+ +L +
Sbjct: 595 KLLEWMLEKNIHPNATTYNSLMK 617
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 144/329 (43%), Gaps = 31/329 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
P+V Y LI+G+C + ++ A + L +M+ RGVEPN Y ++ +C + +
Sbjct: 292 PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTV 351
Query: 58 -----------NERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+E T+ + A + FDEM+ +G+ D +++ +++ R
Sbjct: 352 VEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCR 411
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + + L M + + TYT +V C G++ +A ++ MV+ GV+P+ T
Sbjct: 412 AGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVT 471
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + D A +L +M L + N TYN LI +D +
Sbjct: 472 YTALSDGLCKQGDVQAANELLHEMSNKGLEL-NACTYNSLINGLCKAGYLDQAMRTMADM 530
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ L D+ +YT LI LC+ + A EM++ G+ P VT+ L G S +
Sbjct: 531 DAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRV 590
Query: 277 RTWRR-----LKKKLDEESITFGSEFQNY 300
++ L+K + + T+ S + Y
Sbjct: 591 EGGKKLLEWMLEKNIHPNATTYNSLMKQY 619
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 128/279 (45%), Gaps = 16/279 (5%)
Query: 17 INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR 76
++R+ + E E+ + + NV +YN+LL +C + +A ++FDEM
Sbjct: 242 LSRLPLDEAI--ELFQGLPDKNVCSYNILLKVLCGAGR----------VEDARQLFDEM- 288
Query: 77 VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
PDV ++ I++H Y + + ++ L+ M +G+ P YTSVV LC GR+
Sbjct: 289 --ASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVS 346
Query: 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
DA ++ +MV + V Y + + D A + + +M+ L + TY L
Sbjct: 347 DALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGV-TYTTL 405
Query: 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
I + ++ + L +D +YT+L+ G C++ K EA Q M+++G+
Sbjct: 406 INGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGV 465
Query: 257 LPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
P VT+ L GL + ++ L ++ + + +
Sbjct: 466 APNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNA 504
>gi|297836334|ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331889|gb|EFH62308.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 755
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 142/271 (52%), Gaps = 13/271 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YT++I G+C + R D A +F G +++ G P+++TY +L+ G C +
Sbjct: 472 LPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLI-GACSKFG------ 524
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+I +AE VF M+ G+ PDV +++ +++ Y + H+ + ++ M+ GI P VA
Sbjct: 525 ---SISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVA 581
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ + G +++A E++ E++R G PSA + R D A L+ M
Sbjct: 582 TYNILIHSMVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYM 641
Query: 181 KEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
DL V P++ T + L+ + RM+ +++ + + L D+ Y LIHG C
Sbjct: 642 A--DLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVG 699
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++AC+ M+++G+LP + T L GL
Sbjct: 700 DIEKACELIGLMVQRGMLPNESTHHALVVGL 730
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 115/294 (39%), Gaps = 49/294 (16%)
Query: 11 IYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEK 70
I G+CK+ + + A + + R PN+ Y+ L+ +C + A
Sbjct: 415 IDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDM----------LRAST 461
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+F E+ G+ PD ++ ++ Y + + + + G P++ TYT ++
Sbjct: 462 IFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGACS 521
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
G I DAE + M G+ P TYN Y N +L +M+ + P++
Sbjct: 522 KFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGIS-PDV 580
Query: 191 HTYNILIGMFMALNRMDMVREI-----------------------------------WNH 215
TYNILI + +D EI W +
Sbjct: 581 ATYNILIHSMVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFY 640
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + D+ + + L+HG C Q+ ++A F ++++ GL P V + TL G
Sbjct: 641 MADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHG 694
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/337 (18%), Positives = 129/337 (38%), Gaps = 78/337 (23%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P+ + SL+ + + +++A F+ M+ RG N ++ + C +
Sbjct: 300 FPSRGVCISLVEEILRAHGLELAREFVEHMLSRGRHLNAALLSLFIRKYC------SDGY 353
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC---- 116
F+K ++ M+ GI PD+ +F++ + +A + + L +K GI
Sbjct: 354 FDK----GWELLMGMKDYGIRPDIVAFTVFIDKLCKAGFLREATSVLFKLKLFGISQDSV 409
Query: 117 ----------------------------PTVATYTSVVKCLCSC---------------- 132
P + Y+S + +CS
Sbjct: 410 SVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFEL 469
Query: 133 -------------------GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGA 173
GR + A + G ++++G PS TY + A
Sbjct: 470 GLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGACSKFGSISDA 529
Query: 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
++R MK + L P++ TYN L+ + ++++ V E+ + ++ + + D+ +Y +LIH
Sbjct: 530 ESVFRIMKTEGL-HPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 588
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + EA + E+I +G +P + F + GL
Sbjct: 589 SMVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGL 625
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 133/262 (50%), Gaps = 14/262 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ + L+ GW + AE F EM E GV+P++VTYN L++ C+
Sbjct: 212 PNLQTFNILLSGW---KSSEEAELFYEEMKELGVKPDIVTYNSLIDVFCK---------- 258
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A V MR I PDV +++ ++ +P + D L MKE G P VA
Sbjct: 259 GRELEKAYGVVARMREEDILPDVITYTSIIGGLGLVGQPDKARDMLKEMKEHGCYPDVAA 318
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V++ C R++ A L+ EM G+SP+A +YN FF+ + D + Y +M
Sbjct: 319 YNAVIRNYCIAKRLDAAYSLMAEMESKGMSPNATSYNLFFRVFSWSNDLRNSWDFYGRMM 378
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C+PN + LI +F +++M ++WN + G + +L+ LC+ K
Sbjct: 379 -DAGCLPNTQSCMFLIKLFKRHEKVEMALQLWNDMVEKGFGSYILVSDVLLGMLCDMGKL 437
Query: 242 KEACQYFVEMIEKGLLPQKVTF 263
EA + F++M+EKG P V+F
Sbjct: 438 VEAEKCFLQMVEKGHKPSNVSF 459
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 11/212 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YTS+I G + + D A L EM E G P+V YN ++ C
Sbjct: 278 LPDVITYTSIIGGLGLVGQPDKARDMLKEMKEHGCYPDVAAYNAVIRNYC---------- 327
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K + A + EM +G+ P+ TS+++ V+S ++ + S D M + G P
Sbjct: 328 IAKRLDAAYSLMAEMESKGMSPNATSYNLFFRVFSWSNDLRNSWDFYGRMMDAGCLPNTQ 387
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ ++K ++E A +L +MV G + A K + QM
Sbjct: 388 SCMFLIKLFKRHEKVEMALQLWNDMVEKGFGSYILVSDVLLGMLCDMGKLVEAEKCFLQM 447
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
E N+ I + M +A N+ D +R +
Sbjct: 448 VEKGHKPSNVSFRRIKVLMELA-NKHDAIRNL 478
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
+KG P + T+ ++ S E+AE EM GV P TYN + ++
Sbjct: 207 KKGFRPNLQTFNILLSGWKSS---EEAELFYEEMKELGVKPDIVTYNSLIDVFCKGRELE 263
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A + +M+E+D+ +P++ TY +IG + + D R++ +K D+ +Y +
Sbjct: 264 KAYGVVARMREEDI-LPDVITYTSIIGGLGLVGQPDKARDMLKEMKEHGCYPDVAAYNAV 322
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR-TWRRLKKKLD 287
I C ++ A EM KG+ P ++ +R S+ LR +W + +D
Sbjct: 323 IRNYCIAKRLDAAYSLMAEMESKGMSPNATSYNLFFRVFSWSNDLRNSWDFYGRMMD 379
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 9/201 (4%)
Query: 108 NFMKEKGICPTVAT--YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR 165
+F K K + P T + ++++ LC + DA + + + G P+ +T+N
Sbjct: 167 SFWKFKRLVPVFDTSCFNALLRTLCQEKSMSDARNVYHHL-KKGFRPNLQTFNILLS--- 222
Query: 166 GRKDANGAMKLYRQMKEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
G K + A Y +MKE L V P+I TYN LI +F ++ + ++ ++ D
Sbjct: 223 GWKSSEEAELFYEEMKE--LGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDILPD 280
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
+ +YT +I GL + +A EM E G P + + R + L L
Sbjct: 281 VITYTSIIGGLGLVGQPDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMA 340
Query: 285 KLDEESITFGSEFQNYHFKPY 305
+++ + ++ + N F+ +
Sbjct: 341 EMESKGMSPNATSYNLFFRVF 361
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 136/299 (45%), Gaps = 46/299 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +LI G CK +D A L EM ++G++ NV YN ++NG+C+ +
Sbjct: 466 PNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN------- 518
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A K+ EM V GI+PD +++ V+ Y R + L M ++G+ PTV T
Sbjct: 519 ---IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVT 575
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C G +ED + LLG M+ G+ P A TYN K++ R N K+Y++M+
Sbjct: 576 FNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMR 635
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ +TYNI LI G C+ +
Sbjct: 636 NQGV-APDSNTYNI-----------------------------------LIKGHCKARNL 659
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
KEA + EMIEKG +P ++ L + + R L +++ + E N+
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNF 718
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 147/303 (48%), Gaps = 11/303 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT+LI+G+ K+ + A ++ EM+ + + P+ +TY L+ G +
Sbjct: 360 IPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGK------ 413
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + +F EM RG++PD +++ ++ VY +A + + N M + G+ P +
Sbjct: 414 ----VIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIV 469
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC G ++ A ELL EM + G+ + YN + A+KL ++M
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM 529
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P+ TY +I + L +D ++ + L + ++ +L++G C
Sbjct: 530 EVAGI-DPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGM 588
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
++ + M+EKG++P +T+ TL + + + T ++ K++ + + S N
Sbjct: 589 LEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648
Query: 301 HFK 303
K
Sbjct: 649 LIK 651
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 139/287 (48%), Gaps = 12/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I G+C + + A + + +M +G++PN TYN ++ +C+ + F
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIG-----KSF 345
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AEKV EM + I PD ++ ++H + + + + + M K I P T
Sbjct: 346 E-----AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYIT 400
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++++ G++ + + L EM+ G+ P TY Y + A L+ +M
Sbjct: 401 YTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMV 460
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PNI TY LI +D E+ + ++ L L++ Y +++G+C+
Sbjct: 461 QMGM-TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNI 519
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRTWRRLKKKLD 287
++A + EM G+ P +T+ T+ + D+ + + L++ LD
Sbjct: 520 EQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLD 566
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 25/184 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT++I +C++ ID A + L EM++RG++P VVT+NVL+NG C L +R
Sbjct: 536 PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRL 595
Query: 62 ---------------------EKTIRNA----EKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ IRN+ K++ MR +G+ PD +++I++ + +
Sbjct: 596 LGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCK 655
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + M EKG PTV +Y +++K + +A EL EM +G+ E
Sbjct: 656 ARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEI 715
Query: 157 YNCF 160
YN F
Sbjct: 716 YNFF 719
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 14/257 (5%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
E G+ N +YN+++ +CR ++ A ++ +M R PDV S+S V+
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGK----------VKEAHRLLMQMDFRSSTPDVVSYSTVI 300
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
Y + + +L ++ M+ KG+ P TY S++ LC G+ +AE++L EM+ +
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P Y + A K + +M + P+ TY LI F ++ +
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKIS-PDYITYTTLIQGFGQGGKVIEPQN 419
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+++ + L D +YT LI C+ + A EM++ G+ P VT+ L GL
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479
Query: 272 QSDMLRTWRRLKKKLDE 288
+ L T L LDE
Sbjct: 480 KHGELDTANEL---LDE 493
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +L+ C N ++ + M +GV P+ TYN+L+ G C+
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCK--------- 655
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ ++ A ++ EM +G P VTS++ ++ + + K + + M+ G+
Sbjct: 656 -ARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGE 714
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMV 146
Y V G +E L E +
Sbjct: 715 IYNFFVDMCYEEGDVEITLNLCDEAI 740
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 146/299 (48%), Gaps = 16/299 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+ LI +CK +D+AE + G MIE G+ + YN L+NG C+ L
Sbjct: 396 YSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSA--------- 446
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
AE ++ +M G+EP T+F+ ++ Y + + + + M EK I P+V T+T+++
Sbjct: 447 -AEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALI 505
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LCS + +A +L EMV + P+ TYN + Y + + A +L M + L
Sbjct: 506 YGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGL- 564
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VP+ +TY LI + R+ ++ + + L L+ Y+ L+HG C + + EA
Sbjct: 565 VPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALS 624
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLI-QSDMLRTWRRLKKKLDE----ESITFGSEFQNY 300
EMI++G+ V L G + Q DM R + LKK D+ +S+ + S Y
Sbjct: 625 ASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAY 683
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 12/263 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y++L++G+C R+ A EMI+RG+ ++V + VL++G ++ + ++
Sbjct: 606 YSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDM------KRLFG 659
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+K++D+ G+ PD ++ ++ YS+ + S + L+ M + P V TYT+ +
Sbjct: 660 LLKKMYDQ----GLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFM 715
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G I+ A L +M+ +SP++ TY CF + A L+ +M + L
Sbjct: 716 NGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLL- 774
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
N TYNILI F L R+ ++ + + + + D +Y+ +I+ C A +
Sbjct: 775 -ANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVE 833
Query: 247 YFVEMIEKGLLPQKVTFETLYRG 269
+ M+ KG+ P V F L G
Sbjct: 834 LWDTMLRKGVEPDSVAFNLLIYG 856
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 11/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + L+ G K ID A + ++ G PN+ YN L+N +C+ E
Sbjct: 320 VPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCK------GED 373
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K AE ++ M + + ++SI++ + + ++ M E GI T+
Sbjct: 374 LDK----AELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIY 429
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y S++ C G + AE L +M+ G+ P+A T+ Y A KLYR+M
Sbjct: 430 PYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREM 489
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E ++ P+++T+ LI + N M ++++ + ++ +Y ++I G C+
Sbjct: 490 NEKEI-APSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHN 548
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+A + +M+ GL+P T+ L GL +
Sbjct: 549 MDKAFELLEDMLHNGLVPDTYTYRPLISGLCST 581
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 142/300 (47%), Gaps = 20/300 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +T+LI G+CK +++ A + EM E+ + P+V T+ L+ G+C NE
Sbjct: 461 PTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCS-----TNEMA 515
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A K+FDEM R I+P ++++++ Y +AH + + L M G+ P T
Sbjct: 516 E-----ASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYT 570
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LCS GR+ A++ + ++ + + + Y+ Y G+ A+ +M
Sbjct: 571 YRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMI 630
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEKQ 239
+ + + ++ + +LI A+ + DM R K + GL DS YT +I ++
Sbjct: 631 QRGINM-DLVCHAVLIDG--AMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEG 687
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRTWRRLKKKL----DEESITFG 294
+K++ + M+ + P VT+ GL + ++ R +K L S+T+G
Sbjct: 688 SFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYG 747
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 134/291 (46%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +++I C++ A+ + M + ++VTYNVL++G+C+
Sbjct: 216 PDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGG------- 268
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +V +R +G++ DV ++ ++ + R + + +N M E G PT A
Sbjct: 269 ---VLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAA 325
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V L G I+ A +L+ ++ R G P+ YN +D + A LY+ M
Sbjct: 326 VSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMH 385
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+L + ++ TY+ILI F +D+ + + + + Y LI+G C+
Sbjct: 386 SMNLPLNDV-TYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDL 444
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + +MI +GL P TF TL G + + +L ++++E+ I
Sbjct: 445 SAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIA 495
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 24/175 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PNV YT+ + G CK+ ID A +M+ + PN VTY L+ + + ++
Sbjct: 706 PNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL 765
Query: 58 -NERFEKTIRN-------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+E + + N A KV EM GI PD ++S +++ + R+
Sbjct: 766 HHEMLKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRS 825
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+++ + M KG+ P + ++ C G ++ A EL +M+ G+ P
Sbjct: 826 GDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKP 880
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 136/346 (39%), Gaps = 61/346 (17%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
L++ + + R+ A L M+ + P V T + +LNG+ R K I E
Sbjct: 154 LVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLL---------RIRKFILVWE 204
Query: 70 KVFDEMRVRGIEPD-----------------------------------VTSFSIVLHVY 94
VFDE G++PD + ++++++H
Sbjct: 205 -VFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGL 263
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ +L+ ++EKG+ V TY ++V C + +D L+ EMV G P+
Sbjct: 264 CKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTE 323
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
+ R + + + A L ++ +PN+ YN LI +D ++
Sbjct: 324 AAVSGLVDGLRKKGNIDSAYDLVVKLGRFGF-LPNLFVYNALINALCKGEDLDKAELLYK 382
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG----- 269
++ L L+ +Y++LI C++ A YF MIE G+ + +L G
Sbjct: 383 NMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFG 442
Query: 270 -LIQSDMLRTWRRLKKKLDEESITFGSEFQNY--------HFKPYR 306
L ++ L T + + + L+ + TF + Y FK YR
Sbjct: 443 DLSAAEFLYT-KMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYR 487
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 39/180 (21%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ N Y LI G+CK+ R+ A + L EM E G+ P+ +TY+ ++ CR
Sbjct: 774 LANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGD------ 827
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH-----------------VYSRAHKPQ-- 101
+ A +++D M +G+EPD +F+++++ + SR KP+
Sbjct: 828 ----VGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQI 883
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
L L K ++ G+C ++ C G ++ A L M+ V S E + C +
Sbjct: 884 LQLQK----RDLGVC------NFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMWKCLY 933
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YT++I G CKI A + L +M E+G +P+VV YN +++ +C+
Sbjct: 174 PSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCK---------- 223
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A F EM +GI P+V ++S +LH + + + M + + P T
Sbjct: 224 DRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVT 283
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T +V LC G I +A + M NGV P A TY+ Y + + A KL+ M
Sbjct: 284 FTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMV 343
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P++ YNILI R++ + + + + +L D +Y+ L+ G C+ +
Sbjct: 344 GKGF-APSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRP 402
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ A + F EM GLLP +T+ L GL + L RL K + E I
Sbjct: 403 QVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKI 452
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 150/297 (50%), Gaps = 26/297 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
PNV Y+S+++G+C + +++ A +MI R V PN VT+ +L++G+C+ + R
Sbjct: 244 PNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRV 303
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
FE N A+K+FD M +G P V ++I+++ + +
Sbjct: 304 FEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCK 363
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + L+ M ++ + P TY+++++ C GR + A++L EM G+ P + T
Sbjct: 364 SRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSIT 423
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ + A +L + M+E + P+I YNILI +++ RE+++++
Sbjct: 424 YSILLDGLCKHGHLDEAFRLLKAMQESKI-EPHICIYNILIQGMCNFGKLEAARELFSNL 482
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + +YT++I GL ++ EAC+ F +M+ G LP T+ +G +++
Sbjct: 483 FVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRN 539
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 144/321 (44%), Gaps = 46/321 (14%)
Query: 2 PNVKMYTSLIYGWCKINR--IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE 59
PNV T LI C NR + A LG+M + G++P VT+ LLNG+C +A
Sbjct: 102 PNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAK----- 156
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
I +A K+FDE+ G P + +++ ++ + +L L M+EKG P V
Sbjct: 157 -----IIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDV 211
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +V+ LC R +A EMV G+ P+ TY+ + N A L++Q
Sbjct: 212 VAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQ 271
Query: 180 MKE--------------DDLCV--------------------PNIHTYNILIGMFMALNR 205
M D LC P+ +TY+ L+ + ++
Sbjct: 272 MIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQ 331
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
MD +++++ + G + Y +LI+G C+ ++ EA EM ++ L P VT+ T
Sbjct: 332 MDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYST 391
Query: 266 LYRGLIQSDMLRTWRRLKKKL 286
L +G Q+ + ++L K++
Sbjct: 392 LMQGFCQAGRPQVAQKLFKEM 412
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 112/231 (48%), Gaps = 11/231 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V++Y LI G CK R++ A+ L EM +R + P+ VTY+ L+ G C+ P
Sbjct: 349 PSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAG--RP---- 402
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+K+F EM G+ PD ++SI+L + + L M+E I P +
Sbjct: 403 ----QVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICI 458
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ +C+ G++E A EL + G+ PS TY +N A +++R+M
Sbjct: 459 YNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMV 518
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
+ C+PN TYN+ I F+ + + G D ++ ML+
Sbjct: 519 VNG-CLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 25/119 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-SLHPNER 60
P++ +Y LI G C +++ A + +G++P+VVTY V+++G+ + S E
Sbjct: 454 PHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEM 513
Query: 61 FEKTI------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
F K + NA ++ +EM RG D ++F ++L + S
Sbjct: 514 FRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLES 572
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
P+ YTSLI G+C+ N ++ A + M +G N V+Y +++G+C
Sbjct: 247 PDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISL 306
Query: 51 ----RRASLHPNERFEKTI--------RNAE--KVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R +P R I RN E +F+EMR R EP+V ++++++ +
Sbjct: 307 FKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCK 366
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K S LN M EKG+ P+V TY ++++ C GRIE A E+LG M N P+ T
Sbjct: 367 ERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERT 426
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + RK + AM L +M E L P++ TYN LI + D ++ + +
Sbjct: 427 YNELICGFSKRKHVHKAMTLLSKMLESKL-TPSLVTYNSLIHVQCKAGHFDSAYKLLDLL 485
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
K + L D +Y++ I LC+ ++ +EAC F + EKG+ +V + L G
Sbjct: 486 KENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDG 538
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 130/325 (40%), Gaps = 61/325 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
PNV YT ++ CK ++D + R L EM+E+G+ P+VVTYN L+ G C +
Sbjct: 352 PNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEI 411
Query: 57 ----------PNER--------FEK----------------------------------- 63
PNER F K
Sbjct: 412 LGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCK 471
Query: 64 --TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+ D ++ G+ PD ++S+ + ++ + + + D N +KEKGI
Sbjct: 472 AGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVM 531
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G+I++A LL M P++ TYN + + M
Sbjct: 532 YTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMS 591
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P + TY ILI + D ++N + D+ +YT IH C
Sbjct: 592 KMGV-KPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNV 650
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
KEA MIE G++P +T+ L
Sbjct: 651 KEAEGMMARMIEAGVMPDSLTYTLL 675
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 124/298 (41%), Gaps = 16/298 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V+ Y L+ + ID +R EM+ + PN+ T N ++N + ++ +
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYV 237
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I A G+ PD +++ ++ Y R + + N M KG +Y
Sbjct: 238 SKIFQA----------GLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSY 287
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ LC GRI++ L +M + P+ TY G M L+ +M+E
Sbjct: 288 TTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRE 347
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C PN+HTY +++ ++D R I N + L + +Y LI G CE+ + +
Sbjct: 348 RS-CEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIE 406
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGL-----IQSDMLRTWRRLKKKLDEESITFGS 295
A + M P + T+ L G + M + L+ KL +T+ S
Sbjct: 407 AALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNS 464
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 11/195 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N MYT+LI G CK +ID A L M PN TYN L+ GVC+ E
Sbjct: 528 NEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCK----------E 577
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++ + + M G++P V +++I++ R + N M G P V TY
Sbjct: 578 GKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTY 637
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+ + C+ G +++AE ++ M+ GV P + TY Y A A + ++M
Sbjct: 638 TAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRML- 696
Query: 183 DDLCVPNIHTYNILI 197
D C P+ +N LI
Sbjct: 697 DAGCDPSHPIWNNLI 711
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y SLIYG CK ++ + M + GV+P V TY +L+ + R
Sbjct: 561 LPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLR--------- 611
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E +A +VF++M G +PDV +++ +H Y + + + + M E G+ P
Sbjct: 612 -EGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSL 670
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
TYT ++ G DA +L M+ G PS +N
Sbjct: 671 TYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWN 708
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 145/291 (49%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT L+ CK + A + L EM ++G P++VTYNV++NG+C+
Sbjct: 64 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ--------- 114
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + +A + + G EP+ S++IVL A + + + + + M +KG P V
Sbjct: 115 -EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 173
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++ LC G +E A E+L ++ + G +P++ +YN + +K + AM M
Sbjct: 174 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 233
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C P+I +YN L+ +D+ E+ + +K L SY +I GL + K
Sbjct: 234 VSRG-CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 292
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
KEA + EM+ KGL P +T+ T+ GL + D + R K+ + I
Sbjct: 293 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 343
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 134/284 (47%), Gaps = 14/284 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +++ G+C ++D A R + EM VEP+ TYN L+ G+C R
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGR----------TA 49
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
NA V DEM R PDV +++I+L + + ++ L+ M++KG P + TY VV
Sbjct: 50 NALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVV 109
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+C GR++DA E L + G P+ +YN K + A +L +M + C
Sbjct: 110 NGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG-C 168
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+ T+N+LI ++ E+ + + SY L+H C+++K +A
Sbjct: 169 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 228
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ M+ +G P V++ TL L +S + L +L ++
Sbjct: 229 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 272
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 140/296 (47%), Gaps = 14/296 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ G C R + AE +GEM ++G PNVVT+N+L++ +CR+ + P
Sbjct: 135 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEP---- 190
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +V +++ G P+ S++ +LH + + K ++ L+ M +G P + +
Sbjct: 191 ------ALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 244
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G ++ A ELL ++ G +P +YN A++L +M
Sbjct: 245 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 304
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I TY+ + +R++ + V+ + + Y +I GLC++++
Sbjct: 305 SKGL-QPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 363
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
A F MI G +P + T+ L GL +++ R L LDE G E
Sbjct: 364 HSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDL---LDELCSRAGEEI 416
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 131/271 (48%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++ G C+ R+D A FL + G EPN V+YN++L G+C ER+
Sbjct: 100 PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTA------ERW 153
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +AE++ EM +G P+V +F++++ R + +L+ L + + G P +
Sbjct: 154 E----DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 209
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C +++ A L MV G P +YN + + A++L Q+K
Sbjct: 210 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 269
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C P + +YN +I + E+ N + L D+ +Y+ + GLC + +
Sbjct: 270 -DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 328
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++A + F ++ + G+ P V + + GL +
Sbjct: 329 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 359
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 157/318 (49%), Gaps = 30/318 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-ER 60
PNV +YT+LI G CK I+ A+ EM + G+ N TY VL+NG+ + E
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 61 FEKT------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+EK ++A +VFDEMR RG+ ++ +++ ++ R
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + ++ MK GI P + TY +++ C G++ A L ++ G+SPS T
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + D +GA K+ ++M+E + P+ TY ILI F + M+ + I +
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGI-KPSKVTYTILIDTFARSDNME--KAIQLRL 432
Query: 217 KGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
ELGL D+ +Y++LIHG C K + EA + F M+EK P +V + T+ G +
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 275 MLRTWRRLKKKLDEESIT 292
+L K+++E+ +
Sbjct: 493 SSYRALKLLKEMEEKELA 510
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 11/286 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V + LI G C+ I+ + L E+ E G PNVV Y L++G C++
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE-------- 213
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I A+ +F EM G+ + +++++++ + + + M+E G+ P + TY
Sbjct: 214 --IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
V+ LC GR +DA ++ EM GVS + TYN N A K+ QMK
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D + PN+ TYN LI F + ++ + +K L L +Y +L+ G C K
Sbjct: 332 DGIN-PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
A + EM E+G+ P KVT+ L +SD + +L+ ++E
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y ++ CK R A + EM ERGV N+VTYN L+ G+CR
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR---------- 315
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A KV D+M+ GI P++ +++ ++ + K +L +K +G+ P++ T
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V C G A +++ EM G+ PS TY + + A++L M+
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L VP++HTY++LI F +M+ ++ + + Y +I G C++
Sbjct: 436 ELGL-VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSS 494
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + EM EK L P ++ + L + + RL +K+ + I
Sbjct: 495 YRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 12/266 (4%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
++Y +I + + ++++ + EM++ G P +N LL V +S + F
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSF--- 151
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
F+E + + + DV SF I++ A + + S D L + E G P V YT+
Sbjct: 152 -------FNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTT 203
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ C G IE A++L EM + G+ + TY ++Y +M+ED
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG 263
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
+ PN++TYN ++ R ++++ ++ + ++ +Y LI GLC + K EA
Sbjct: 264 V-FPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGL 270
+ +M G+ P +T+ TL G
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGF 348
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 60/213 (28%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR-----ASLH 56
PN+ Y +LI G+C + ++ A ++ RG+ P++VTYN+L++G CR+ A+
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 57 PNERFEKTIR-----------------NAEKVFD---EMRVRGIEPDVTSFSIVLHVY-- 94
E E+ I+ N EK M G+ PDV ++S+++H +
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 95 -------SRAHKPQL--------------------------SLDKLNFMKEKGICPTVAT 121
SR K + +L L M+EK + P VA+
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
Y +++ LC + ++AE L+ +M+ +G+ PS
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+ LI+G+C +++ A R M+E+ EPN V YN ++ G C+ S +
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY---- 495
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+ EM + + P+V S+ ++ V + K + + + M + GI P+ +
Sbjct: 496 ------RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTS 549
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 140/273 (51%), Gaps = 11/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + L+ +CK ++ + M+++G++PN VTYN L++G C
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC----------L 342
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A+ +F+ M G+ PD+ S+SI+++ + + K +++ M K I P V T
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ L GRI A +L+ +M GV P+ TYN + A+ L ++K
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLK 462
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN++TY+ILI +++ R+++ + L++D+YT++I G C + +
Sbjct: 463 DKGI-QPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLF 521
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA +M + G +P T+E + L + D
Sbjct: 522 NEALALLSKMEDNGCIPDAKTYEIIILSLFKKD 554
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 143/281 (50%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV MY ++I CK+ ++ A EMI +G+ P+VVTY+ L++G C L+
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLN----- 277
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A +F++M + I+PDV +F+I+++ + + K + + M ++GI P T
Sbjct: 278 -----DAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVT 332
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C + A+ + M + GV+P ++Y+ + K + AM L+++M
Sbjct: 333 YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMH 392
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ +P++ TY+ LI R+ ++ + + + + +Y ++ LC+ +
Sbjct: 393 RKNI-IPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQV 451
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+A ++ +KG+ P T+ L +GL QS L R++
Sbjct: 452 DKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKV 492
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 137/285 (48%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI+G CK+ A L + V+PNVV YN +++ +C+ K +
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKV----------KLVN 242
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +F EM +GI PDV ++S ++ + K ++D N M + I P V T+ +V
Sbjct: 243 EAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILV 302
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G++++ + + M++ G+ P+ TYN Y K+ N A ++ M + +
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN 362
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+I +Y+I+I F + + D ++ + + D+ +Y+ LI GL + + A Q
Sbjct: 363 -PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQ 421
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+M ++G+ P T+ ++ L + + L KL ++ I
Sbjct: 422 LVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGI 466
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 145/325 (44%), Gaps = 46/325 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ LI +C++ I A ++++ G P+ +T+ L+ G+C +
Sbjct: 118 PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQ------- 170
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I+ A D++ G D S+ ++H + + + +LD L + + P V
Sbjct: 171 ---IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVM 227
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ +C + +A +L EM+ G+SP TY+ + N A+ L+ +M
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287
Query: 182 EDDLCVPNIHTYNILIGMFMALNRM-------DMV------------------------- 209
+++ P+++T+NIL+ F +M DM+
Sbjct: 288 LENI-KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346
Query: 210 ---REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ I+N + + D+ SY+++I+G C+ +K+ EA F EM K ++P VT+ +L
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESI 291
GL +S + +L ++ + +
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGV 431
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 113/211 (53%), Gaps = 11/211 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ Y+ +I G+CKI + D A EM + + P+VVTY+ L++G+ +
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGR------- 415
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A ++ D+M RG+ P + +++ +L + H+ ++ L +K+KGI P + T
Sbjct: 416 ---ISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYT 472
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++K LC G++EDA ++ ++ G + + +TY + + N A+ L +M
Sbjct: 473 YSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKM- 531
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
ED+ C+P+ TY I+I + DM ++
Sbjct: 532 EDNGCIPDAKTYEIIILSLFKKDENDMAEKL 562
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P ++ Y S++ CKI+++D A L ++ ++G++PN+ TY++L+ G+C+ L
Sbjct: 433 PTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKL------ 486
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A KVF+ + V+G +V +++I++ + +L L+ M++ G P T
Sbjct: 487 ----EDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKT 542
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
Y ++ L + AE+LL EM+ GV P
Sbjct: 543 YEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 1/206 (0%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ +A +F+ + R P F+ +L ++ L M+ +GI P +
Sbjct: 66 VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ C C G I A + ++++ G P T+ K + A + ++
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
I +Y LI + ++ V G+ + ++ Y +I +C+ + EA
Sbjct: 186 FHFDQI-SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGL 270
F EMI KG+ P VT+ L G
Sbjct: 245 FDLFSEMISKGISPDVVTYSALISGF 270
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 1/181 (0%)
Query: 107 LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRG 166
NF+ +Y+S S ++DA L ++R +P A +N
Sbjct: 38 FNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVK 97
Query: 167 RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
K + + L ++M+ + PN+ NILI F L + ++ + D
Sbjct: 98 SKHYHTVLYLSQKMEFRGI-KPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTI 156
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
++T LI GLC K + ++A + +++ G ++++ TL GL + R L +++
Sbjct: 157 TFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216
Query: 287 D 287
D
Sbjct: 217 D 217
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 142/298 (47%), Gaps = 26/298 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+LIYG+C + ++ A L EMI + + P V YN+L+N +C+ ++ +
Sbjct: 183 PDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNL 242
Query: 62 EKT-------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
++NA+++F M G+ P+V S++I+++ +
Sbjct: 243 LAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCK 302
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +++ L M K + P TY S++ LC GRI A L+ EM G T
Sbjct: 303 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 362
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y ++ + A L+ +MKE + P ++TY LI R+ +E++ H+
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGI-QPTMYTYTALIDGLCKGGRLKNAQELFQHL 421
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+D+ +YT++I GLC++ + EA +M + G +P VTFE + R L + D
Sbjct: 422 LVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKD 479
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 140/285 (49%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV MY ++I G CK ++ A EM RG+ P+ +TY L+ G C L
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQL------ 201
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + DEM ++ I P V ++I+++ + + + + L M ++GI P V T
Sbjct: 202 ----MGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVT 257
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C G +++A+++ MV+ GV+P+ +YN K + AM L R+M
Sbjct: 258 YSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREML 317
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ VP+ TYN LI R+ + N + D+ +YT L+ LC+ Q
Sbjct: 318 HKNM-VPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNL 376
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A F++M E+G+ P T+ L GL + L+ + L + L
Sbjct: 377 DKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHL 421
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +L+ G CKI A + L + +R PNVV YN +++G+C+ +K +
Sbjct: 118 YGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCK----------DKLVN 167
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++ EM RGI PD +++ +++ + + + L+ M K I P V Y ++
Sbjct: 168 EAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILI 227
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G +++A+ LL M + G+ P TY+ Y + A +++ M + +
Sbjct: 228 NALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVN 287
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+++YNI+I R+D + + + D +Y LI GLC+ + A
Sbjct: 288 -PNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALN 346
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM +G VT+ +L L ++ L L K+ E I
Sbjct: 347 LMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 391
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 17/257 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +I G CK R+D A L EM+ + + P+ VTYN L++G+C+
Sbjct: 288 PNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR------- 340
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I +A + +EM RG DV +++ +L + + MKE+GI PT+ T
Sbjct: 341 ---ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYT 397
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC GR+++A+EL ++ G TY + A+ + +M
Sbjct: 398 YTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKM- 456
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH-VKGSELGLDLDSYTMLIHGLCEKQK 240
ED+ C+PN T+ I+I + D ++ + + L LD + + +K +
Sbjct: 457 EDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLVLDFKVADVFVQNENDKAE 516
Query: 241 WKEACQYFVEMIEKGLL 257
+ EMI KGLL
Sbjct: 517 -----KLLHEMIAKGLL 528
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 138/308 (44%), Gaps = 46/308 (14%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI +C + ++ + LG++++ G +P+ +T N L+ G+C + + + F
Sbjct: 51 LINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFH------- 103
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
D++ +G + D S+ +L+ + + + ++ L ++++ P V Y +++ L
Sbjct: 104 ---DKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGL 160
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C + +A +L EM G+ P A TY + GA L +M ++ P
Sbjct: 161 CKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNI-NPG 219
Query: 190 IHTYNILI--------------------------GMFMALNRMD---MVREIWNHVK--- 217
++ YNILI G+ MD +V E+ N +
Sbjct: 220 VYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFH 279
Query: 218 -GSELGLDLD--SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
++G++ + SY ++I+GLC+ ++ EA EM+ K ++P VT+ +L GL +S
Sbjct: 280 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 339
Query: 275 MLRTWRRL 282
+ + L
Sbjct: 340 RITSALNL 347
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 10/197 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y SLI G CK RI A + EM RG +VVTY LL+ +C+ N+
Sbjct: 322 VPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCK------NQN 375
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K A +F +M+ RGI+P + +++ ++ + + + + + + KG C V
Sbjct: 376 LDK----ATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVW 431
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ LC G ++A + +M NG P+A T+ + + + + A KL +M
Sbjct: 432 TYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 491
Query: 181 KEDDLCVPNIHTYNILI 197
L V + ++ +
Sbjct: 492 IAKGLLVLDFKVADVFV 508
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/188 (18%), Positives = 81/188 (43%), Gaps = 1/188 (0%)
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
P + F+ +L ++ + ++ M+ KGI T ++ C C G++ + +
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
LG++++ G P T N K + + ++ + ++ + ++ +Y L+
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHV-SYGTLLNGLC 126
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
+ ++ ++ ++ Y +I GLC+ + EA + EM +G+ P +
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186
Query: 262 TFETLYRG 269
T+ TL G
Sbjct: 187 TYTTLIYG 194
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 136/272 (50%), Gaps = 11/272 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y S+++G+C + A L +M GVEPNVVTY+ L+N +C+ N R
Sbjct: 241 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK------NGR 294
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K+FD M RG+EPD+ ++ +L + + + S + M G+ P +
Sbjct: 295 STE----ARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDII 350
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ C G++++A +LL MV GV P TY Y + A+ L+++M
Sbjct: 351 TYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 410
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ PNI TYNI++ R +E++ + S L+L +Y +++HGLC+
Sbjct: 411 VSSGVS-PNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 469
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA + F + L + TF + L++
Sbjct: 470 TDEALRMFQNLCLTDLQLETRTFNIMIGALLK 501
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 6/276 (2%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIER---GVEPNVVTYNVLLNGVCRRASLHP 57
+P+V Y +L+ G C NR A L M + G P+VV+YN +LNG +
Sbjct: 160 IPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGI--Q 217
Query: 58 NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
+ + + A +V + M G+ PD +++ +LH Y + +P+ ++ L M+ G+ P
Sbjct: 218 TKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEP 277
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V TY+S++ LC GR +A ++ M + G+ P TY + + + KL+
Sbjct: 278 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLF 337
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
M + P+I TYN LI +MD ++ + + D+ +Y LI+G C
Sbjct: 338 DLMVRIGV-KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 396
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ +A F EM+ G+ P +T+ + +GL +
Sbjct: 397 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 432
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 138/298 (46%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SL+ CK R A + M +RG+EP++ TY LL G C+
Sbjct: 277 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCK---------- 326
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +EK+FD M G++PD+ +++ ++ A K + L M G+ P + T
Sbjct: 327 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 386
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R++DA L EMV +GVSP+ TYN + + A +LY +
Sbjct: 387 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 446
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + TYNI++ N D ++ ++ ++L L+ ++ ++I L + +
Sbjct: 447 KSGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 505
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
EA F GL+P T+ + LI+ L L ++E + S N
Sbjct: 506 DEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLN 563
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 144/295 (48%), Gaps = 23/295 (7%)
Query: 2 PNVKMYTSLIYGWCK--------INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA 53
P+V Y +++ G+ K +D A L M++ GV P+ +TYN +L+G C +
Sbjct: 199 PDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC--S 256
Query: 54 SLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK 113
S P E A +MR G+EP+V ++S +++ + + + + M ++
Sbjct: 257 SGQPKE--------AIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 308
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE--YRGRKDAN 171
G+ P +ATY ++++ C GR+ ++E+L MVR GV P TYN G+ D
Sbjct: 309 GLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDE- 367
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A KL M + P+I TY LI + ++RMD ++ + S + ++ +Y ++
Sbjct: 368 -ATKLLASMVSVGV-KPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 425
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ GL ++ A + +V + + G + T+ + GL ++++ R+ + L
Sbjct: 426 LQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 480
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 21/279 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y LI C+ R+D+ LG ++++G + +T+ LL G+C
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCAD--------- 140
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK---GICPT 118
++T + V M G PDV S++ +L ++ Q +L+ L+ M + G P
Sbjct: 141 KRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPD 200
Query: 119 VATYTSV--------VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
V +Y +V ++ + ++ A E+L MV+NGV P TYN Y
Sbjct: 201 VVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 260
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
A+ ++M+ D + PN+ TY+ L+ R R+I++ + L D+ +Y
Sbjct: 261 KEAIGTLKKMRSDGV-EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRT 319
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
L+ G C++ + E+ + F M+ G+ P +T+ TL G
Sbjct: 320 LLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 358
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 19/258 (7%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
+A VFDE+ RG + + L +R H P ++ + N M G + PTV TY
Sbjct: 38 DARHVFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYA 96
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C C GR++ LG +V+ G A T+ K K + AM + + +
Sbjct: 97 ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV---KGSELGLDLDSYTMLIHGLCEK-- 238
C+P++ +YN L+ NR E+ + + +G D+ SY +++G ++
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGI 216
Query: 239 ------QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKKLDE 288
Q +A + M++ G++P +T+ ++ G S + + T ++++ E
Sbjct: 217 QTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 276
Query: 289 ESITFGSEFQNYHFKPYR 306
++ S NY K R
Sbjct: 277 PNVVTYSSLMNYLCKNGR 294
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 25/193 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV--CRRASL---- 55
P++ Y +LI G+C+++R+D A EM+ GV PN++TYN++L G+ RR +
Sbjct: 382 PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 441
Query: 56 -----HPNERFEKTIRN--------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ E + N A ++F + + ++ + +F+I++ +
Sbjct: 442 YVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 501
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D G+ P V TY+ + + L G +E+ ++L M NG S +
Sbjct: 502 CGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRM 561
Query: 157 YNCFFKEYRGRKD 169
N ++ R D
Sbjct: 562 LNSIVRKLLQRGD 574
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 139/272 (51%), Gaps = 15/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+LI G CK +D A L EM + G++PN+ TYN ++NG+C+ +
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN------- 506
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A K+ E G+ D +++ ++ Y ++ + + + L M KG+ PT+ T
Sbjct: 507 ---IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C G +ED E+LL M+ G++P+A T+N K+Y R + A +Y+ M
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ TY L+ M ++ +KG + + +Y++LI G +++K+
Sbjct: 624 SRGVG-PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682
Query: 242 KEACQYFVEMIEKGLLPQKVTF----ETLYRG 269
EA + F +M +GL K F +T Y+G
Sbjct: 683 LEAREVFDQMRREGLAADKEIFDFFSDTKYKG 714
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT+LI G+CK I A +F EM R + P+V+TY +++G C+ +
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM----- 402
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+F EM +G+EPD +F+ +++ Y +A + + N M + G P V
Sbjct: 403 -----VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ LC G ++ A ELL EM + G+ P+ TYN + A+KL +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L + TY L+ + MD +EI + G L + ++ +L++G C
Sbjct: 518 EAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYR 268
++ + M+ KG+ P TF +L +
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 138/304 (45%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +Y S+I C+I ++ AE EMI +G+ P+ V Y L++G C+R
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD------- 366
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
IR A K F EM R I PDV +++ ++ + + + + M KG+ P T
Sbjct: 367 ---IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T ++ C G ++DA + M++ G SP+ TY D + A +L +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L PNI TYN ++ ++ ++ + + L D +YT L+ C+ +
Sbjct: 484 KIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGSE 296
+A + EM+ KGL P VTF L G ML + L K + + TF S
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 297 FQNY 300
+ Y
Sbjct: 603 VKQY 606
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 136/299 (45%), Gaps = 11/299 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T LI G+CK + A R MI+ G PNVVTY L++G+C+ L
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD----- 473
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ EM G++P++ +++ +++ ++ + ++ + + G+ T
Sbjct: 474 -----SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G ++ A+E+L EM+ G+ P+ T+N + KL M
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN T+N L+ + N + I+ + +G D +Y L+ G C+ +
Sbjct: 589 AKGI-APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
KEA F EM KG T+ L +G ++ R + ++ E + E ++
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 119/254 (46%), Gaps = 11/254 (4%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
E E GV NV +YN++++ VC+ I+ A + M ++G PDV S+S
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGR----------IKEAHHLLLLMELKGYTPDVISYS 285
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
V++ Y R + + MK KG+ P Y S++ LC ++ +AEE EM+R
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G+ P Y + R D A K + +M D+ P++ TY +I F + M
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI-TPDVLTYTAIISGFCQIGDMVE 404
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++++ + L D ++T LI+G C+ K+A + MI+ G P VT+ TL
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 269 GLIQSDMLRTWRRL 282
GL + L + L
Sbjct: 465 GLCKEGDLDSANEL 478
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 127/296 (42%), Gaps = 26/296 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----------- 51
NV Y +I+ C++ RI A L M +G P+V++Y+ ++NG CR
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 52 ----RASLHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
R L PN +I AE+ F EM +GI PD ++ ++ + +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ + M + I P V TYT+++ C G + +A +L EM G+ P + T+
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
Y A +++ M + C PN+ TY LI +D E+ + +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
L ++ +Y +++GLC+ +EA + E GL VT+ TL +S
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR-AHKPQLSLDKLNFMKEKGICPTVATYT 123
+R A +VF++M G+ V S ++ L S+ +K ++ E G+C VA+Y
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
V+ +C GRI++A LL M G +P +Y+ Y + + KL MK
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
L PN + Y +IG+ LC K E
Sbjct: 311 GL-KPNSYIYGSIIGL-----------------------------------LCRICKLAE 334
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + F EMI +G+LP V + TL G + +R + ++ IT
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K Y +L+ G CK + A EM +G +V TY+VL+ G +R
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR--------- 679
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
K A +VFD+MR G+ D F + +P +D ++
Sbjct: 680 -KKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPID 725
>gi|356561955|ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Glycine max]
Length = 622
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 157/302 (51%), Gaps = 16/302 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++++Y ++ GW ++ ++ ER EM E + P VVTY L+ G CR R
Sbjct: 274 VPSIRVYNIMLNGWFRLRKLKQGERLWAEMKE-NMRPTVVTYGTLVEGYCRM------RR 326
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK + ++ +M GI P+ ++ ++ + A + + +L L I PT +
Sbjct: 327 VEKAL----EMVGDMTKEGIAPNAIVYNPIIDALAEAGRFKEALGMLERFHVLEIGPTDS 382
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQ 179
TY S+VK C G + A ++L M+ G PSA TYN FF+ + R RK G M LY +
Sbjct: 383 TYNSLVKGFCKAGDLVGASKILKMMISRGFLPSATTYNYFFRYFSRCRKIEEG-MNLYTK 441
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ + P+ TY++L+ M ++D+ ++ ++ + +DL + TML+H LC+ +
Sbjct: 442 LIQSGY-TPDRLTYHLLVKMLCEEEKLDLAVQVSKEMRHNGYDMDLATSTMLVHLLCKVR 500
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ +EA F +MI +G++PQ +TF+ + L + M ++L K + S+ + N
Sbjct: 501 RLEEAFVEFEDMIRRGIVPQYLTFQRMKADLKKQGMTEMAQKLCKLMS--SVPYSPNLPN 558
Query: 300 YH 301
+
Sbjct: 559 TY 560
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 27/209 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLN--GVCRR------- 52
P Y SL+ G+CK + A + L MI RG P+ TYN CR+
Sbjct: 379 PTDSTYNSLVKGFCKAGDLVGASKILKMMISRGFLPSATTYNYFFRYFSRCRKIEEGMNL 438
Query: 53 -----ASLHPNERF-----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
S + +R E+ + A +V EMR G + D+ + ++++H+ +
Sbjct: 439 YTKLIQSGYTPDRLTYHLLVKMLCEEEKLDLAVQVSKEMRHNGYDMDLATSTMLVHLLCK 498
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS-AE 155
+ + + + M +GI P T+ + L G E A++L M SP+
Sbjct: 499 VRRLEEAFVEFEDMIRRGIVPQYLTFQRMKADLKKQGMTEMAQKLCKLMSSVPYSPNLPN 558
Query: 156 TYNCFFKE-YRGRKDANGAMKLYRQMKED 183
TY ++ Y RK K + M +D
Sbjct: 559 TYGEVREDAYARRKSIIRKAKAFSDMLKD 587
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 99/234 (42%), Gaps = 14/234 (5%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK----CLCSCGRIEDA 138
V +F+I++ Y+RA +L++ F + S+++ LC G + +A
Sbjct: 200 SVGTFAIMIRRYARAGMSKLAIRTYEFATNNKSIVDSGSEMSLLEILMDSLCKEGSVREA 259
Query: 139 EE--LLGEMVRNGVSPSAETYNCFFKE-YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
E L + + PS YN +R RK G +L+ +MKE+ P + TY
Sbjct: 260 SEYFLWKKELDLSWVPSIRVYNIMLNGWFRLRKLKQGE-RLWAEMKEN--MRPTVVTYGT 316
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF--VEMIE 253
L+ + + R++ E+ + + + Y +I L E ++KEA ++E
Sbjct: 317 LVEGYCRMRRVEKALEMVGDMTKEGIAPNAIVYNPIIDALAEAGRFKEALGMLERFHVLE 376
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPYRR 307
G P T+ +L +G ++ L ++ K + + NY F+ + R
Sbjct: 377 IG--PTDSTYNSLVKGFCKAGDLVGASKILKMMISRGFLPSATTYNYFFRYFSR 428
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 146/277 (52%), Gaps = 13/277 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+VK +TSL+YGWCK ++ A+ L +M + G+EP++V YN LL G + +
Sbjct: 233 PSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMG----- 287
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A + EMR +G EP+ TS+++++ + + + + M+ G + T
Sbjct: 288 -----DAYDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVT 342
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C G+I+ ELL EM++ G P+ Y + +++ +L +M+
Sbjct: 343 YSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQ 402
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P++ YN +I + L + +WN ++ S L +D++ ++I+G E+
Sbjct: 403 KIG-CAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCL 461
Query: 242 KEACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
EAC+YF EM+ +GL PQ T + L L++++ L
Sbjct: 462 VEACEYFKEMVGRGLFAAPQYGTLKELMNSLLRAEKL 498
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 115/260 (44%), Gaps = 11/260 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y ++I ++ + + EM R P+++T V + + R AS + +
Sbjct: 133 YKAMIKVLSRMRQFGAVWALIEEM--RQENPHLITPQVFVILMRRFAS-------ARMVH 183
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +V DEM G EPD F +L + + + ++ + P+V +TS++
Sbjct: 184 KAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELRYRWK-PSVKHFTSLL 242
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G++ +A+ +L +M G+ P YN Y A L ++M+ C
Sbjct: 243 YGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKG-C 301
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN +Y +LI R++ ++ ++ + DL +Y+ LI G C+ K K +
Sbjct: 302 EPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYE 361
Query: 247 YFVEMIEKGLLPQKVTFETL 266
EMI++G P +V ++ +
Sbjct: 362 LLDEMIQQGHFPNQVIYQHI 381
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 138/282 (48%), Gaps = 5/282 (1%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV YT+LI G C +RI A R M + G PN VTY L+ G+C+ +++ +
Sbjct: 158 IPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALK 217
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K + N + +P V ++SI++ + + + + MK +G+ P V
Sbjct: 218 LHKEMLNDASQYG----VNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVI 273
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y++++ C G+ + ++ L EMV GV P T++ A KL M
Sbjct: 274 SYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVM 333
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + VPN+ TYN LI F + ++ RE++ + L D SYT LI+G C+ K
Sbjct: 334 IQRGI-VPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWK 392
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
KEA + EM++ G P T+ TL +GL Q + ++L
Sbjct: 393 VKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKL 434
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 150/291 (51%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++ LI CK ++ A++ L MI+RG+ PN++TYN L++G C L+
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLN----- 359
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++F M +G+EPD S++ +++ Y + K + +++ N M + G P V T
Sbjct: 360 -----SARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTT 414
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K L G++ DA++L G M GVS +++ Y F AM+L+ ++K
Sbjct: 415 YGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELK 474
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + NI Y+ LI +++ E++ + L D+ +Y ++IHG C+ +
Sbjct: 475 SYNFKL-NIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQV 533
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A F +M E G P + + TL G + + L +L K+ ++ ++
Sbjct: 534 DNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVS 584
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 141/290 (48%), Gaps = 17/290 (5%)
Query: 9 SLIYGWCKINRID--MAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
SL CK I A F M+ P + ++N LL G+ + H ++ F
Sbjct: 59 SLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKIN--HYSQLFS---- 112
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+++EMR+ G+ PD+ + SI+ + ++ +L + + +G P V TYT+++
Sbjct: 113 ----LYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLI 168
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL- 185
K LC RI +A L M + G +P+A TY K + N A+KL+++M D
Sbjct: 169 KGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQ 228
Query: 186 ----CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P + TY+I+I + R D +E++ +K + D+ SY+ LIHG C KW
Sbjct: 229 YGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKW 288
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++ F EM+++G+ P VTF L L + + ++L + + + I
Sbjct: 289 DQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGI 338
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 95/199 (47%), Gaps = 11/199 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +L+ G + ++ A++ G M GV N Y + L+G+C+ L F
Sbjct: 410 PNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCL-----F 464
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A ++F+E++ + ++ ++S ++ +A K + + + + ++G+ P V T
Sbjct: 465 E-----AMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVT 519
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C G++++A L +M NG +P YN + +KL +M
Sbjct: 520 YNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMV 579
Query: 182 EDDLCVPNIHTYNILIGMF 200
+ D+ PN + I++ M
Sbjct: 580 QKDVS-PNAASCTIVVDML 597
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 3/167 (1%)
Query: 130 CSCGRIE--DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
C G I A M+R+ P ++N + LY +M+ L
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLS- 123
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
P++ T +IL +NR+ + ++ +YT LI GLC + + EA +
Sbjct: 124 PDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRL 183
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
F+ M + G P VT+ TL +GL Q+ + +L K++ ++ +G
Sbjct: 184 FLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYG 230
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+P I ++N L+G +N + ++N ++ + L DL + ++L + LC + EA
Sbjct: 88 IPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALA 147
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKK-KLDEESITFGS 295
++ +G +P VT+ TL +GL S+ R + R++K ++T+G+
Sbjct: 148 AMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGT 201
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 26/294 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P + +T+LI CK+ + A +M+ RG P+V TY ++NG+C+
Sbjct: 166 PTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGL 225
Query: 52 -----RASLHPN----------ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
A PN R ++ + A +F M+V+GI PD+ +++ ++
Sbjct: 226 LKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCN 285
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + LN M+ I P + T+ +V +C G++ +A+ +L M GV P T
Sbjct: 286 FSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVT 345
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ Y R + A KL+ M C P++ +YNILI + + R+D ++++N +
Sbjct: 346 YSSLMYGYSLRSEVVEARKLFDAMITKG-CKPDVFSYNILINGYCKVKRIDEAKQLFNEM 404
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
L + SY LIHGLC+ +EA F M G LP T+ L G
Sbjct: 405 IHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGF 458
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 153/313 (48%), Gaps = 32/313 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PN+ + LI + + R+D+A L ++I+ G++P +VT+ L+N +C+
Sbjct: 131 PNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMEL 190
Query: 56 ---------HPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P+ TI N A + +M G +P+V ++S ++ + +
Sbjct: 191 FDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRK 250
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +LD ++MK KGI P + TY S+++ LC+ + ++A LL EM + P T
Sbjct: 251 DRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVT 310
Query: 157 YNCFFKEY--RGR-KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
+N G+ +A G +K +M + P++ TY+ L+ + + + R+++
Sbjct: 311 FNVLVDTICKEGKVSEAQGVLKTMTEMGVE----PDVVTYSSLMYGYSLRSEVVEARKLF 366
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + D+ SY +LI+G C+ ++ EA Q F EMI +GL P V++ TL GL Q
Sbjct: 367 DAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQL 426
Query: 274 DMLRTWRRLKKKL 286
LR R L K +
Sbjct: 427 GSLREARNLFKNM 439
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 133/272 (48%), Gaps = 11/272 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP++ + L+ CK ++ A+ L M E GVEP+VVTY+ L+ G R+
Sbjct: 305 MPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSE------ 358
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K+FD M +G +PDV S++I+++ Y + + + N M +G+ P
Sbjct: 359 ----VVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNV 414
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y +++ LC G + +A L M NG P+ TY+ + + A +L+R M
Sbjct: 415 SYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAM 474
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ PN+ YNILI + R++++ + L + YT +I+GLC++
Sbjct: 475 -QSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGL 533
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA + F M E G P ++++ + RG +
Sbjct: 534 LDEALEAFRNMEEDGCPPDEISYNVIIRGFLH 565
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SLI G C ++ A L EM + P++VT+NVL++ +C+
Sbjct: 271 PDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICK---------- 320
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A+ V M G+EPDV ++S +++ YS + + + M KG P V +
Sbjct: 321 EGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFS 380
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C RI++A++L EM+ G++P+ +YN A L++ M
Sbjct: 381 YNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMH 440
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PN+ TY+IL+ F ++ ++ + +L Y +LI +C+
Sbjct: 441 TNG-NLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNL 499
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++A + F E+ KGL P + T+ GL + +L + ++E+
Sbjct: 500 RDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEED 547
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 15/294 (5%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
C ID A M+ R P ++ + LL+ + + ++ T+ + K +
Sbjct: 73 CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMG------QYYDTVISLTK---Q 123
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
M + G+ P++ + SI+++ +S + L+ L + + G+ PT+ T+T+++ LC G+
Sbjct: 124 MELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGK 183
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
A EL +MV G P TY + A L ++M+E C PN+ TY+
Sbjct: 184 FAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAG-CQPNVVTYS 242
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
+I R++ +I++++K + D+ +Y LI GLC +WKEA EM
Sbjct: 243 TIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSL 302
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFGSEFQNYHFK 303
++P VTF L + + + + + K + E + +T+ S Y +
Sbjct: 303 NIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLR 356
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 131/285 (45%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+++I K R++ A M +G+ P++ TYN L+ G+C +
Sbjct: 236 PNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQW------ 289
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + +EMR I PD+ +F++++ + K + L M E G+ P V T
Sbjct: 290 ----KEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVT 345
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ + +A +L M+ G P +YN Y K + A +L+ +M
Sbjct: 346 YSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMI 405
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L PN +YN LI L + R ++ ++ + +L +Y++L+ G C++ +
Sbjct: 406 HQGL-TPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYF 464
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A + F M P V + L + +S LR R+L +L
Sbjct: 465 GKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSEL 509
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 45/216 (20%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI G+CK+ RID A++ EMI +G+ PN V+YN L++G+C+ SL
Sbjct: 376 PDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSL------ 429
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-----------------SRAHKPQLSL 104
R A +F M G P++ ++SI+L + S KP L +
Sbjct: 430 ----REARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVM 485
Query: 105 ---------------DKLNFMKE---KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
D E KG+ P YT+++ LC G +++A E M
Sbjct: 486 YNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNME 545
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+G P +YN + + KD + A++L +M++
Sbjct: 546 EDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRD 581
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 10/120 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ MY LI CK + A + E+ +G++PN Y ++NG+C+
Sbjct: 481 PNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCK---------- 530
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A + F M G PD S+++++ + ++ + M++KG V T
Sbjct: 531 EGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 139/272 (51%), Gaps = 15/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+LI G CK +D A L EM + G++PN+ TYN ++NG+C+ +
Sbjct: 897 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN------- 949
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A K+ E G+ D +++ ++ Y ++ + + + L M KG+ PT+ T
Sbjct: 950 ---IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 1006
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C G +ED E+LL M+ G++P+A T+N K+Y R + A +Y+ M
Sbjct: 1007 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 1066
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ TY L+ M ++ +KG + + +Y++LI G +++K+
Sbjct: 1067 SRGVG-PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 1125
Query: 242 KEACQYFVEMIEKGLLPQKVTF----ETLYRG 269
EA + F +M +GL K F +T Y+G
Sbjct: 1126 LEAREVFDQMRREGLAADKEIFDFFSDTKYKG 1157
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT+LI G+CK I A +F EM R + P+V+TY +++G C+ +
Sbjct: 791 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM----- 845
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+F EM +G+EPD +F+ +++ Y +A + + N M + G P V
Sbjct: 846 -----VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 900
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ LC G ++ A ELL EM + G+ P+ TYN + A+KL +
Sbjct: 901 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 960
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L + TY L+ + MD +EI + G L + ++ +L++G C
Sbjct: 961 EAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 1019
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYR 268
++ + M+ KG+ P TF +L +
Sbjct: 1020 LEDGEKLLNWMLAKGIAPNATTFNSLVK 1047
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 138/304 (45%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +Y S+I C+I ++ AE EMI +G+ P+ V Y L++G C+R
Sbjct: 757 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD------- 809
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
IR A K F EM R I PDV +++ ++ + + + + M KG+ P T
Sbjct: 810 ---IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 866
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T ++ C G ++DA + M++ G SP+ TY D + A +L +M
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L PNI TYN ++ ++ ++ + + L D +YT L+ C+ +
Sbjct: 927 KIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 985
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGSE 296
+A + EM+ KGL P VTF L G ML + L K + + TF S
Sbjct: 986 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 1045
Query: 297 FQNY 300
+ Y
Sbjct: 1046 VKQY 1049
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 136/299 (45%), Gaps = 11/299 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T LI G+CK + A R MI+ G PNVVTY L++G+C+ L
Sbjct: 862 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD----- 916
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ EM G++P++ +++ +++ ++ + ++ + + G+ T
Sbjct: 917 -----SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 971
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G ++ A+E+L EM+ G+ P+ T+N + KL M
Sbjct: 972 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1031
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN T+N L+ + N + I+ + +G D +Y L+ G C+ +
Sbjct: 1032 AKGIA-PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 1090
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
KEA F EM KG T+ L +G ++ R + ++ E + E ++
Sbjct: 1091 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 1149
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 11/242 (4%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
E E GV NV +YN++++ VC+ I+ A + M ++G PDV S+S
Sbjct: 679 EFPEVGVCWNVASYNIVIHFVCQLGR----------IKEAHHLLLLMELKGYTPDVISYS 728
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
V++ Y R + + MK KG+ P Y S++ LC ++ +AEE EM+R
Sbjct: 729 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 788
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G+ P Y + R D A K + +M D+ P++ TY +I F + M
Sbjct: 789 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI-TPDVLTYTAIISGFCQIGDMVE 847
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++++ + L D ++T LI+G C+ K+A + MI+ G P VT+ TL
Sbjct: 848 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 907
Query: 269 GL 270
GL
Sbjct: 908 GL 909
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 127/296 (42%), Gaps = 26/296 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----------- 51
NV Y +I+ C++ RI A L M +G P+V++Y+ ++NG CR
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 52 ----RASLHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
R L PN +I AE+ F EM +GI PD ++ ++ + +
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 807
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ + M + I P V TYT+++ C G + +A +L EM G+ P + T+
Sbjct: 808 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 867
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
Y A +++ M + C PN+ TY LI +D E+ + +
Sbjct: 868 TELINGYCKAGHMKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
L ++ +Y +++GLC+ +EA + E GL VT+ TL +S
Sbjct: 927 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 982
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR-AHKPQLSLDKLNFMKEKGICPTVATYT 123
+R A +VF++M G+ V S ++ L S+ +K ++ E G+C VA+Y
Sbjct: 634 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 693
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
V+ +C GRI++A LL M G +P +Y+ Y + + KL MK
Sbjct: 694 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 753
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
L PN + Y +IG+ LC K E
Sbjct: 754 GL-KPNSYIYGSIIGL-----------------------------------LCRICKLAE 777
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + F EMI +G+LP V + TL G + +R + ++ IT
Sbjct: 778 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 826
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K Y +L+ G CK + A EM +G +V TY+VL+ G +R
Sbjct: 1072 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR--------- 1122
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
K A +VFD+MR G+ D F + +P +D ++
Sbjct: 1123 -KKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPID 1168
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 152/307 (49%), Gaps = 34/307 (11%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ Y +LI G C++ ++ A + +MI RG+ P+VVTY VL+NG C+ ++
Sbjct: 411 NIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNM------- 463
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFS------IVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
A++ FDEM G+ PD +++ + L ++A K Q M KG
Sbjct: 464 ---LMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEE------MLTKGFP 514
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P V TY V LC G +E+A ELL +M+R+G P TY F + NG ++
Sbjct: 515 PDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHM----ENGHLRE 570
Query: 177 YRQMKEDDLC---VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
R++ D L P + TY +LI R+D + ++ + ++ +Y +LI+
Sbjct: 571 GREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLIN 630
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR-----GLIQSDMLRTWRRLKKKLDE 288
G C+ +K +AC++F+EM EKG+ P K T+ L G Q + + L K++
Sbjct: 631 GFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRP 690
Query: 289 ESITFGS 295
+S T G+
Sbjct: 691 DSCTHGA 697
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 140/294 (47%), Gaps = 17/294 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y ++++ +CK + A + +M ERG P+ VT+NVL+NG+ ++ L
Sbjct: 235 PTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGEL------ 288
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+ + EM G+ +++ ++ Y + +L M +G+ PTVA+
Sbjct: 289 ----QQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVAS 344
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C G++ DA + L +M++ + P +YN + + A L +++
Sbjct: 345 HNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELR 404
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+L NI TYN LI L ++ ++ + + D+ +YT+L++G C+
Sbjct: 405 FRNLSF-NIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNM 463
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRTWRRLKKKLDEESITFG 294
A ++F EM+ GL P + + G ++ D + + KL EE +T G
Sbjct: 464 LMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAF-----KLQEEMLTKG 512
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 11/240 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M E G+ P V TYN +L+ C+ ++ A + +M+ RG P +F++
Sbjct: 228 MGEYGIRPTVTTYNTMLHSFCKGGE----------VQRALDLVPKMQERGCYPSEVTFNV 277
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+++ S+ + Q + + M + G+ + TY ++ C G + +A L EMV G
Sbjct: 278 LINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRG 337
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
VSP+ ++N + + A + M + +L +P+I +YN LI F L +
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNL-MPDIISYNTLIYGFCRLGNIGEA 396
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + ++ L ++ +Y LI GLC + A + +MI +G+ P VT+ L G
Sbjct: 397 FILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNG 456
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 1/224 (0%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A +V+ M GI P VT+++ +LH + + + Q +LD + M+E+G P+ T+ ++
Sbjct: 221 ALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLIN 280
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
L G ++ A+ L+ EM + G+ S TYN Y + A+ L+ +M +
Sbjct: 281 GLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVS- 339
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
P + ++N ++ F +M R+ + + L D+ SY LI+G C EA
Sbjct: 340 PTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFIL 399
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
E+ + L VT+ TL GL + L T +LK+ + I
Sbjct: 400 LDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGI 443
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%), Gaps = 1/200 (0%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
VF++M PDV + + +L + + +L+ M E GI PTV TY +++ C
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
G ++ A +L+ +M G PS T+N + + A L ++M + L V +
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRV-SP 307
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
+TYN LI + + +W + + + S+ +++G C++ K +A Q +
Sbjct: 308 YTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSD 367
Query: 251 MIEKGLLPQKVTFETLYRGL 270
M++K L+P +++ TL G
Sbjct: 368 MLKKNLMPDIISYNTLIYGF 387
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 10/128 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V YT LI+ R+D A + EM E+GV PNV+TYNVL+NG C+
Sbjct: 585 PTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKV--------- 635
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A K F EM+ +GI P+ +++I+++ K Q +L M K I P T
Sbjct: 636 -RKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCT 694
Query: 122 YTSVVKCL 129
+ +++K L
Sbjct: 695 HGALLKKL 702
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y LI G+CK+ ++D A +F EM E+G+ PN TY +L+N C +
Sbjct: 619 VPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMG------K 672
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
+++ +R ++ +M + I PD + +L + +K Q
Sbjct: 673 WQEALR----LYAQMLGKRIRPDSCTHGALLKKLDKDYKVQ 709
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 141/272 (51%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI+G N+ A + +M++RG +P++VTY ++NG+C+R
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD------- 238
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + +M IE DV ++ ++ + +L+ M KGI P V T
Sbjct: 239 ---IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLC+ GR DA LL +M+ ++P+ T++ + A KLY +M
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TY+ LI F +R+D + ++ + + ++ +Y+ LI G C+ ++
Sbjct: 356 KRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+E + F EM ++GL+ VT+ TL G Q+
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 143/288 (49%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+SLI C R A R L +MIER + PNVVT++ L++ +
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK---------- 340
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK++DEM R I+PD+ ++S +++ + + + M K P V T
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++K C R+E+ EL EM + G+ + TY + +D + A +++QM
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PNI TYNIL+ ++ ++ +++ S + D+ +Y ++I G+C+ K
Sbjct: 461 SVGV-HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++ + F + KG+ P + + T+ G + L KK+ E+
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 138/291 (47%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +SL+ G+C RI A + +M+E G +P+ T+ L++G+ LH N+
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF----LH-NKAS 205
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A + D+M RG +PD+ ++ V++ + L+L L M++ I V
Sbjct: 206 E-----AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC ++DA L EM G+ P TY+ + A +L M
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + PN+ T++ LI F+ ++ ++++ + + D+ +Y+ LI+G C +
Sbjct: 321 ERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EA F MI K P VT+ TL +G ++ + L +++ + +
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 137/304 (45%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + L+ K+N+ ++ +M G+ ++ TY++ +N CRR+ L
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSL---- 136
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V +M G EPD+ + S +L+ Y + + ++ ++ M E G P T
Sbjct: 137 ------ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ L + +A L+ +MV+ G P TY R D + A+ L ++M+
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + ++ YN +I MD ++ + + D+ +Y+ LI LC +W
Sbjct: 251 KGKI-EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSE 296
+A + +MIE+ + P VTF L ++ L +L K+ +D + T+ S
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 297 FQNY 300
+
Sbjct: 370 INGF 373
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 16/284 (5%)
Query: 17 INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR 76
I ++D A G+M++ P++V +N LL+ V + +FE I E +M+
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM------NKFELVISLGE----QMQ 110
Query: 77 VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
GI D+ ++SI ++ + R + L+L L M + G P + T +S++ C RI
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
DA L+ +MV G P T+ A+ A+ L QM + C P++ TY +
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTV 229
Query: 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
+ +D+ + ++ ++ D+ Y +I GLC+ + +A F EM KG+
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 257 LPQKVTFETLYRGLIQ----SDMLRTWRRL-KKKLDEESITFGS 295
P T+ +L L SD R + ++K++ +TF +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N YT+LI+G+ + D A+ +M+ GV PN++TYN+LL+G+C+ L
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL------- 484
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A VF+ ++ +EPD+ +++I++ +A K + + + KG+ P V Y
Sbjct: 485 ---AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C G E+A+ LL +M +G P++ TYN + D + +L ++M+
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I G+C+ + A+ L +M E G PN TYN L+ RA L +R
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI-----RARLRDGDR- 589
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
+ ++ EMR G D ++ +V ++ + LD L+
Sbjct: 590 ----EASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 632
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 141/303 (46%), Gaps = 35/303 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PN+ Y +I G+C R A+R L EM ER + P+VVT++VL+N + +
Sbjct: 281 PNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEEL 340
Query: 54 -------SLHPN--------ERFEKTIR--NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ PN + F K R AE++F M +G PDV +FSI++ Y
Sbjct: 341 YNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCG 400
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + L+ M +G+ TYT+++ C G + A +LL EM+ +GV P+ T
Sbjct: 401 AKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVT 460
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCV----------PNIHTYNILIGMFMALNRM 206
N A+++++ M++ + + P++ TYNILI + +
Sbjct: 461 CNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKF 520
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
E++ + L D +Y +I GLC++ + EA Q F M KG P VTF TL
Sbjct: 521 SEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTL 580
Query: 267 YRG 269
G
Sbjct: 581 ING 583
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 139/283 (49%), Gaps = 22/283 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y S+I G+ K NR+D AER M +G P+V+T+++L++G C
Sbjct: 350 IPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCG--------- 400
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K + + K+ EM RG+ + +++ ++H + + +LD L M G+CP V
Sbjct: 401 -AKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVV 459
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVR-----------NGVSPSAETYNCFFKEYRGRKD 169
T +++ LC+ G+++DA E+ M + N V P +TYN
Sbjct: 460 TCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGK 519
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
+ A +LY +M L VP+ TYN +I +R+D ++++ + D+ ++T
Sbjct: 520 FSEAEELYEEMPHRGL-VPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFT 578
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
LI+G C+ + + + F EM +G++ +T+ TL G Q
Sbjct: 579 TLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQ 621
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 154/320 (48%), Gaps = 32/320 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------- 54
PNV +T+L+ G C+ R+ A L M+E G++PN +TY +++G+C+
Sbjct: 175 PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 234
Query: 55 ---------LHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ PN I +A+ +F EM+ +GI P++ +++ +++ +
Sbjct: 235 LRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFC 294
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + L M E+ + P V T++ ++ L G+ +AEEL EM+ G+ P+
Sbjct: 295 SSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTI 354
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN + + + A +++ M C P++ T++ILI + R+D ++ +
Sbjct: 355 TYNSMIDGFSKQNRLDAAERMFYLMATKG-CSPDVITFSILIDGYCGAKRVDDGMKLLHE 413
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-- 273
+ L + +YT LIHG C+ A EMI G+ P VT TL GL +
Sbjct: 414 MSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGK 473
Query: 274 --DMLRTWRRLKK-KLDEES 290
D L ++ ++K K+D ++
Sbjct: 474 LKDALEMFKVMQKSKMDLDA 493
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 108/236 (45%), Gaps = 36/236 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+ N YT+LI+G+C++ ++ A L EMI GV PNVVT N LL+G+C L
Sbjct: 420 VANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALE 479
Query: 56 ---------------HPNERFEKTIRN----------------AEKVFDEMRVRGIEPDV 84
HP E ++ AE++++EM RG+ PD
Sbjct: 480 MFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDT 539
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
+++ V+ + + + + M KG P V T+T+++ C GR+ D E+ E
Sbjct: 540 ITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCE 599
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
M R G+ +A TY + + NGA+ ++++M + I N+L G++
Sbjct: 600 MGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 655
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 143/304 (47%), Gaps = 21/304 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ +T LI +C +++ A G++ + G P++VT++ LL+G+C E
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLC----------VE 159
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A F ++ +P+V +F+ +++ R + ++ L+ M E G+ P TY
Sbjct: 160 DRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITY 215
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVR-NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++V +C G A LL +M + + P+ Y+ A L+ +M+
Sbjct: 216 GTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQ 275
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + PN+ TYN +I F + R + + + ++ D+ ++++LI+ L ++ K+
Sbjct: 276 EKGIS-PNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKF 334
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSE 296
EA + + EM+ +G++P +T+ ++ G + + L R+ K + ITF
Sbjct: 335 FEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSIL 394
Query: 297 FQNY 300
Y
Sbjct: 395 IDGY 398
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 122/273 (44%), Gaps = 16/273 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V + L+ ++ R D+ +M R + N+ ++ +L+ C + L
Sbjct: 73 LPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLP---- 128
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTV 119
A F ++ G P + +FS +LH + + L+F + IC P V
Sbjct: 129 ------FALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVS---EALHFFHQ--ICKPNV 177
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+T+++ LC GR+ +A LL MV +G+ P+ TY D A+ L R+
Sbjct: 178 IAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRK 237
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+E PN+ Y+ +I R + +++ ++ + +L +Y +I+G C
Sbjct: 238 MEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSG 297
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+W EA + EM E+ + P VTF L L++
Sbjct: 298 RWSEAQRLLREMFERKMSPDVVTFSVLINALVK 330
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y S+I G CK +R+D A + M +G P+VVT+ L+NG C+
Sbjct: 536 VPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGR------ 589
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + +VF EM RGI + ++ ++H + + +LD M G+ P
Sbjct: 590 ----VGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTI 645
Query: 121 TYTSVVKCLCS 131
T +++ L S
Sbjct: 646 TIRNMLTGLWS 656
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
F E +G DA + L+ M +P + + L+G+ + + R D+V + ++
Sbjct: 51 FHEIKGLDDA---IDLFGYMVRSRP-LPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ ++ S+T+LI C K A F ++ + G P VTF TL GL D
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVED 160
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 146/289 (50%), Gaps = 11/289 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI C R A R L +MIER + PNVVT++ L++ +
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK---------- 338
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK++DEM R I+PD+ ++S +++ + + + M K P V T
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+++ EL EM + G+ + TY + ++ + A +++QM
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + +P+I TY+IL+ +++ ++ +++ S++ D+ +Y ++I G+C+ K
Sbjct: 459 SDGV-LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
++ F + KG+ P VT+ T+ G + + L +++ EE
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 147/309 (47%), Gaps = 50/309 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--RASLHPNE 59
P++ SL+ G+C NRI A +G+M+E G +P+ T+N L++G+ R RAS
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS----- 203
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL--------------- 104
A + D M V+G +PD+ ++ IV++ + L+L
Sbjct: 204 -------EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 105 -----------------DKLNF---MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
D LN M KGI P V TY S+++CLC+ GR DA LL +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
M+ ++P+ T++ + A KLY +M + + P+I TY+ LI F +
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHD 375
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
R+D + ++ + + ++ +Y LI G C+ ++ E + F EM ++GL+ VT+
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 265 TLYRGLIQS 273
TL G Q+
Sbjct: 436 TLIHGFFQA 444
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 138/305 (45%), Gaps = 44/305 (14%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ Y+ LI +C+ +++ +A L +M++ G EP++VT N LLNG C H N
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFC-----HGNR--- 166
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I +A + +M G +PD +F+ ++H R ++ ++ ++ M KG P + TY
Sbjct: 167 --ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
VV LC G I+ A LL +M + + P YN K+ N A+ L+ +M
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 183 DDL------------CV----------------------PNIHTYNILIGMFMALNRMDM 208
+ C+ PN+ T++ LI F+ ++
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 344
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++++ + + D+ +Y+ LI+G C + EA F MI K P VT+ TL +
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 269 GLIQS 273
G ++
Sbjct: 405 GFCKA 409
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 134/304 (44%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++ L+ K+N+ D+ +M G+ N+ TY++L+N CRR+ L
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSL---- 134
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V +M G EPD+ + + +L+ + ++ ++ + M E G P T
Sbjct: 135 ------ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFT 188
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ L R +A L+ MV G P TY R D + A+ L ++M+
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P + YN +I ++ ++ + + ++ +Y LI LC +W
Sbjct: 249 QGKI-EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSE 296
+A + +MIE+ + P VTF L ++ L +L K+ +D + T+ S
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 297 FQNY 300
+
Sbjct: 368 INGF 371
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 142/304 (46%), Gaps = 23/304 (7%)
Query: 4 VKMYTSLIYGWCKIN-------RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH 56
V+ ++ + Y + KI+ ++D A G+M++ P++V ++ LL+ + +
Sbjct: 39 VRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKM---- 94
Query: 57 PNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
+F+ I E +M+ GI ++ ++SI+++ + R + L+L L M + G
Sbjct: 95 --NKFDLVISLGE----QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYE 148
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P + T S++ C RI DA L+G+MV G P + T+N A+ A+ L
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+M C P++ TY I++ +D+ + ++ ++ + Y +I LC
Sbjct: 209 VDRMVVKG-CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRL-KKKLDEESI 291
+ +A F EM KG+ P VT+ +L R L SD R + ++K++ +
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 292 TFGS 295
TF +
Sbjct: 328 TFSA 331
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N YT+LI+G+ + D A+ +M+ GV P+++TY++LL+G+C
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK-------- 481
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A VF+ ++ +EPD+ +++I++ +A K + D + KG+ P V TY
Sbjct: 482 --VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ C G E+A+ L EM G P + TYN + + D + +L R+M+
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y+ L+ G C +++ A + +EP++ TYN+++ G+C+
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK------ 516
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + +F + ++G++P+V +++ ++ + R + + MKE+G P
Sbjct: 517 ----VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEM 145
TY ++++ G + EL+ EM
Sbjct: 573 TYNTLIRAHLRDGDKAASAELIREM 597
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 139/296 (46%), Gaps = 26/296 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + YTSLI G C +R A L EM + PNVVT+NVL++ C+ + E
Sbjct: 148 PTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGV 207
Query: 62 EKT-------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
KT + A K+FD M +G +PDV S+SI+++ Y +
Sbjct: 208 LKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCK 267
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + N M +G P +Y +++ LC GR+ +A++L M NG P+ T
Sbjct: 268 AKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYT 327
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + + A +L+R M+ L PN+ YNIL+ + RE+++ +
Sbjct: 328 YAILLDGFCKQGYLGKAFRLFRAMQSTYL-KPNLVMYNILVNAMCKSGNLKDARELFSEL 386
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
L ++ YT +I+GLC++ EA + F M + G P + ++ + RG +Q
Sbjct: 387 FVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQ 442
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 148/288 (51%), Gaps = 17/288 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + +T+LI G K+ + A +M+ RG +P+ TY ++NG+C+
Sbjct: 43 PTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIG-------- 94
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A +F +M G + +V ++S ++H + + +LD ++MK K I PT+ T
Sbjct: 95 ETAL--AAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFT 152
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRK-DANGAMKLYR 178
YTS+++ LC+ R ++A LL EM + P+ T+N + G+ A G +K
Sbjct: 153 YTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMT 212
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M + P++ TYN L+ + + R++++ + D+ SY++LI+G C+
Sbjct: 213 EMGVE----PDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKA 268
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
++ EA Q F EMI +G P V++ TL GL Q LR + L K +
Sbjct: 269 KRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNM 316
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 1/192 (0%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
M + G+ P+ + +I+++ + + + L L + G+ PT+ T+T+++ L G+
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
A EL +MV G P TY + A L+++M+E C N+ TY+
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAG-CQLNVVTYS 119
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
LI R++ +I++++K ++ + +YT LI GLC +WKEA EM
Sbjct: 120 TLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSL 179
Query: 255 GLLPQKVTFETL 266
++P VTF L
Sbjct: 180 NIMPNVVTFNVL 191
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 45/216 (20%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+ LI G+CK RID A++ EMI +G PN V+YN L++G+C+ L
Sbjct: 253 PDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRL------ 306
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-----------------SRAHKPQL-- 102
R A+ +F M G P++ +++I+L + S KP L
Sbjct: 307 ----REAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 362
Query: 103 ------SLDKLNFMKEK----------GICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
++ K +K+ G+ P V YT+++ LC G +++A E M
Sbjct: 363 YNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 422
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+G P +YN + + KD + A+ L +M++
Sbjct: 423 DDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRD 458
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 152/301 (50%), Gaps = 16/301 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +LI CK ++ ++ L M ++GV+P+VV Y++L++G C
Sbjct: 218 PNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGE------- 270
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A+++F M G+ PDV S++I+++ + + +++ L M K + P T
Sbjct: 271 ---VQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVT 327
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ LC GRI +L EM G + TYN ++ + A+ L+ +MK
Sbjct: 328 YSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMK 387
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + PN +TY LI R+ + ++ H+ +D+ +YT++I GLC++ +
Sbjct: 388 ERGI-QPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMF 446
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG-SEFQNY 300
EA +M + G +P VTFE + R L++ D +KL E I G F+N+
Sbjct: 447 DEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKD----ENDKAEKLLHEMIAKGLLPFRNF 502
Query: 301 H 301
H
Sbjct: 503 H 503
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 142/285 (49%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V MY+++I G CK +D A EM RG+ P+V+TY L+ G C L
Sbjct: 148 PDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQL------ 201
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +EM ++ I P++ +++ ++ + K + S + L M +KG+ P V
Sbjct: 202 ----MEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVI 257
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ C G ++ A+++ MV+ GV+P +YN K + AM L R+M
Sbjct: 258 YSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREML 317
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ +P+ TY+ LI L R+ + ++ + +L +Y L+ GLC+ Q
Sbjct: 318 HKNM-IPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNL 376
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A F++M E+G+ P K T+ L GL + L+ + L + L
Sbjct: 377 DKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHL 421
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 142/321 (44%), Gaps = 46/321 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ + LI +C + ++ + LG++++ G +PN + N L+ G+C + + +
Sbjct: 42 VPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLH 101
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F D++ +G + D S+ I+L+ + + + ++ L ++++ P V
Sbjct: 102 FH----------DKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVV 151
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y++++ LC +++A +L EM G+ P TY + A L +M
Sbjct: 152 MYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEM 211
Query: 181 KEDDLCVPNIHTYNILIGM-----------------------------------FMALNR 205
++ PNI+TYN LI + +
Sbjct: 212 ILKNIN-PNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGE 270
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ ++I+ + + + D+ SY ++I+GLC+ ++ EA EM+ K ++P VT+ +
Sbjct: 271 VQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSS 330
Query: 266 LYRGLIQSDMLRTWRRLKKKL 286
L GL + + T L K++
Sbjct: 331 LIDGLCKLGRITTILDLTKEM 351
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+SLI G CK+ RI EM RG N+VTYN LL+G+C+ N+
Sbjct: 322 IPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCK------NQN 375
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K I +F +M+ RGI+P+ +++ ++ + + + + KG C V
Sbjct: 376 LDKAI----ALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVW 431
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ LC G ++A + +M NG P+A T+ + + + + A KL +M
Sbjct: 432 TYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEM 491
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 1/209 (0%)
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
+M +GI PD+ + SI+++ + + S L + + G P +++K LC G
Sbjct: 35 QMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKG 94
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
++ + ++V G +Y + A+KL R + ED P++ Y
Sbjct: 95 EVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTI-EDRSTRPDVVMY 153
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
+ +I +D ++++ + + D+ +YT LI G C + EA EMI
Sbjct: 154 STIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMIL 213
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
K + P T+ TL L + ++ + L
Sbjct: 214 KNINPNIYTYNTLIDTLCKEGKVKESKNL 242
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 145/291 (49%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT L+ CK + A + L EM ++G P++VTYNV++NG+C+
Sbjct: 190 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ--------- 240
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + +A + + G EP+ S++IVL A + + + + + M +KG P V
Sbjct: 241 -EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 299
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++ LC G +E A E+L ++ + G +P++ +YN + +K + AM M
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C P+I +YN L+ +D+ E+ + +K L SY +I GL + K
Sbjct: 360 VSRG-CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 418
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
KEA + EM+ KGL P +T+ T+ GL + D + R K+ + I
Sbjct: 419 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 469
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 131/272 (48%), Gaps = 14/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ G+C ++D A R + EM VEP+ TYN L+ G+C R
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTA----- 175
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA V DEM R PDV +++I+L + + ++ L+ M++KG P + T
Sbjct: 176 -----NALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVT 230
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y VV +C GR++DA E L + G P+ +YN K + A +L +M
Sbjct: 231 YNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMG 290
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C PN+ T+N+LI ++ E+ + + SY L+H C+++K
Sbjct: 291 QKG-CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKM 349
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+A + M+ +G P V++ TL L +S
Sbjct: 350 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 381
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 137/285 (48%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ G C R + AE +GEM ++G PNVVT+N+L++ +CR+ + P
Sbjct: 261 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEP---- 316
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +V +++ G P+ S++ +LH + + K ++ L+ M +G P + +
Sbjct: 317 ------ALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 370
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G ++ A ELL ++ G +P +YN A++L +M
Sbjct: 371 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 430
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I TY+ + +R++ + V+ + + Y +I GLC++++
Sbjct: 431 SKGL-QPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 489
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A F MI G +P + T+ L GL +++ R L +L
Sbjct: 490 HSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 534
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 131/271 (48%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++ G C+ R+D A FL + G EPN V+YN++L G+C ER+
Sbjct: 226 PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT------AERW 279
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +AE++ EM +G P+V +F++++ R + +L+ L + + G P +
Sbjct: 280 E----DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C +++ A L MV G P +YN + + A++L Q+K
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 395
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C P + +YN +I + E+ N + L D+ +Y+ + GLC + +
Sbjct: 396 -DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 454
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++A + F ++ + G+ P V + + GL +
Sbjct: 455 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 485
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 5/222 (2%)
Query: 46 LNGVCRRASLHPNERFEKTIRNAEKVFDEMRV-RGIEPDVTSFSIVLHVYSRAHKPQLSL 104
L G RR K + + + + RV PDV +++ ++ Y A QL
Sbjct: 87 LVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAMVAGYCGAG--QLDA 144
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
+ + E + P TY ++++ LC GR +A +L EM+R P TY +
Sbjct: 145 AR-RLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEAT 203
Query: 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
R AMKL +M+ D C P+I TYN+++ R+D E ++ +
Sbjct: 204 CKRSGYKQAMKLLDEMR-DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPN 262
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
SY +++ GLC ++W++A + EM +KG P VTF L
Sbjct: 263 TVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 304
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G +++A L+G R P A T K+ A+G R++ C P++
Sbjct: 79 GELDEALRLVGSARR----PDAGTCAALIKKL----SASGRTAEARRVLA--ACGPDVMA 128
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT--MLIHGLCEKQKWKEACQYFVE 250
YN ++ + ++D R + +E+ ++ D+YT LI GLC + + A E
Sbjct: 129 YNAMVAGYCGAGQLDAARRLV-----AEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDE 183
Query: 251 MIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
M+ + +P VT+ L + +++ K LDE
Sbjct: 184 MLRRRCVPDVVTYTILLEATCKRS---GYKQAMKLLDE 218
>gi|297839201|ref|XP_002887482.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333323|gb|EFH63741.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 490
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 134/271 (49%), Gaps = 15/271 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + L +GWC++ A + L EMI+ G +P TY ++ C+
Sbjct: 164 PDATTFNVLFFGWCRVRDPKKAMKLLEEMIQAGHKPENFTYCAAIDTFCQAG-------- 215
Query: 62 EKTIRNAEKVFDEMRVRGI---EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ A +F+ M +G P +F++++ ++ K + + + M G P
Sbjct: 216 --MVDEAADLFEFMITKGSVVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPD 273
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V+TY V++ +C G++E+A + L EM G P TYNCF + + ++ A+KLY
Sbjct: 274 VSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKSDEALKLYG 333
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M E C P++ TYN+LI MF ++ D W + + D+++Y ++I+GL +
Sbjct: 334 RMVESR-CAPSVQTYNMLISMFFEMDDPDGAFNTWKEMDERDCVQDIETYCVMINGLFDC 392
Query: 239 QKWKEACQYFVEMIEKGL-LPQKVTFETLYR 268
+ KEAC E++ KGL LP + L R
Sbjct: 393 HRAKEACFLLEEVVNKGLKLPYRAFDSFLMR 423
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 117/263 (44%), Gaps = 21/263 (7%)
Query: 31 IERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIV 90
I +P + +N+LL+ +C+ ++ E + MR R ++PD T+F+++
Sbjct: 124 IRVKTQPEINAFNMLLDALCKCG----------LVKEGEALLRRMRHR-VKPDATTFNVL 172
Query: 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG- 149
+ R P+ ++ L M + G P TY + + C G +++A +L M+ G
Sbjct: 173 FFGWCRVRDPKKAMKLLEEMIQAGHKPENFTYCAAIDTFCQAGMVDEAADLFEFMITKGS 232
Query: 150 --VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY-NILIGMFMALNRM 206
+P+A+T+ A +L +M C+P++ TY +++ GM MA ++
Sbjct: 233 VVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTG-CLPDVSTYKDVIEGMCMA-GKV 290
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + + + D+ +Y + LCE +K EA + + M+E P T+ L
Sbjct: 291 EEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKSDEALKLYGRMVESRCAPSVQTYNML 350
Query: 267 YRGLIQSD----MLRTWRRLKKK 285
+ D TW+ + ++
Sbjct: 351 ISMFFEMDDPDGAFNTWKEMDER 373
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +I G C +++ A +FL EM +G P++VTYN L +C N +
Sbjct: 271 LPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGYPPDIVTYNCFLRVLCE------NRK 324
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ + K++ M P V ++++++ ++ P + + M E+ +
Sbjct: 325 SDEAL----KLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWKEMDERDCVQDIE 380
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ L C R ++A LL E+V G+ ++ F + KL M
Sbjct: 381 TYCVMINGLFDCHRAKEACFLLEEVVNKGLKLPYRAFDSFLMRLSTVGNLKAIHKLSEHM 440
Query: 181 KE 182
K+
Sbjct: 441 KK 442
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 147/290 (50%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +LI+G N+ A + +M++RG +P++VTY ++NG+C+R
Sbjct: 183 PDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGD------- 235
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + +M IE DV ++ ++ + + N M+ KGI P V T
Sbjct: 236 ---IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFT 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ CLC+ GR DA LL M+ ++P+ T++ + A KLY +M
Sbjct: 293 YNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TY+ LI F +R+D + ++ + + ++ +Y LI G C+ ++
Sbjct: 353 KRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+E + F EM ++GL+ VT+ TL +GL Q+ +++ KK+ + +
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 144/288 (50%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y SLI C R A R L MIER + PNVVT++ L++ +
Sbjct: 288 PDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVK---------- 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK++DEM R I+PD+ ++S +++ + + + M K P V T
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+E+ EL EM + G+ + TYN + D + A K++++M
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + P+I TY+IL+ +++ ++ +++ S++ D+ +Y ++I G+C+ K
Sbjct: 458 SDGV-PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++ F + KG+ P + + T+ G + + L +++ E+
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 142/320 (44%), Gaps = 44/320 (13%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI +C+ +++ +A LG+M++ G EP++VT + LLNG C K I
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCH----------SKRIS 167
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + D+M G +PD +F+ ++H +K ++ ++ M ++G P + TY +VV
Sbjct: 168 DAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVV 227
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL- 185
LC G I+ A LL +M + + YN K + A L+ +M+ +
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIR 287
Query: 186 -----------CV----------------------PNIHTYNILIGMFMALNRMDMVREI 212
C+ PN+ T++ LI F+ ++ ++
Sbjct: 288 PDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++ + + D+ +Y+ LI+G C + EA F MI K P VT+ TL +G +
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 273 SDMLRTWRRLKKKLDEESIT 292
+ + L +++ + +
Sbjct: 408 AKRVEEGMELFREMSQRGLV 427
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 135/305 (44%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ + L+ K+ + D+ M + ++ +YN+L+N CRR+ L
Sbjct: 77 LPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPL--- 133
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A V +M G EPD+ + S +L+ Y + + ++ ++ M E G P
Sbjct: 134 -------ALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTV 186
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ +++ L + +A L+ +MV+ G P TY R D + A+ L ++M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKM 246
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + ++ YN +I +D ++N ++ + D+ +Y LI LC +
Sbjct: 247 EKGKI-EADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGR 305
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
W +A + MIE+ + P VTF L ++ L +L K+ +D + T+ S
Sbjct: 306 WSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 296 EFQNY 300
+
Sbjct: 366 LINGF 370
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 132/282 (46%), Gaps = 16/282 (5%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
++D A GEM++ P++V +N LL+ + + ++F+ I E+ M+
Sbjct: 60 KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKM------KKFDLVISLGER----MQNL 109
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
I D+ S++I+++ + R + L+L L M + G P + T +S++ C RI DA
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 169
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ +MV G P T+N A+ A+ L QM + C P++ TY ++
Sbjct: 170 VALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGAVVN 228
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
+D+ + ++ ++ D+ Y +I GLC+ + +A F +M KG+ P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRP 288
Query: 259 QKVTFETLYRGLIQ----SDMLRTWRRL-KKKLDEESITFGS 295
T+ +L L SD R + ++K++ +TF +
Sbjct: 289 DVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSA 330
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y +LI G + DMA++ +M+ GV P+++TY++LL+G+C+ L
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE------ 482
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A VF+ ++ +EPD+ +++I++ +A K + D + KG+ P V Y
Sbjct: 483 ----KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ C G E+A+ L EM +G P + YN + D + +L ++M+
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRS 598
Query: 183 DDLCVPNIHTYNILIGMF 200
V + T +++I M
Sbjct: 599 CGF-VGDASTISMVINML 615
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +I G CK +++ + +GV+PNV+ Y +++G CR+
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG-------- 549
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ +F EM+ G PD ++ ++ R S + + M+ G +T
Sbjct: 550 --LKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 607
Query: 122 YTSVVKCLCSCGRIEDA 138
+ V+ L GR+E +
Sbjct: 608 ISMVINMLHD-GRLEKS 623
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 136/264 (51%), Gaps = 11/264 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV +LI+G C+ N + A + L M+ GVE + +TYN+++ G C+ + +
Sbjct: 456 NVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMD------ 509
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A ++ D+M RG +PD+ +F+I LH Y K + L L+ MK +G+ P + TY
Sbjct: 510 ----EAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTY 565
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C + A E L E+++NG+ P+A YN Y + + A+ + MK
Sbjct: 566 GTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKY 625
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ + P TYN L+ ++ V+ ++ ++ L + YT++I G C+ K
Sbjct: 626 NGI-QPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKID 684
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
EA YF EM +G+ P K+T+ TL
Sbjct: 685 EAVMYFKEMHSRGIPPNKMTYTTL 708
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 142/329 (43%), Gaps = 38/329 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I C+ ID A L E+ G++P VVTYNVL++ +C+ + R
Sbjct: 209 PDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRL 268
Query: 62 -----EKTIRNA--------------------EKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E +R + V EM+ GI P+ ++ ++ + R
Sbjct: 269 KGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCR 328
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L + M KGI TV TY + K LC G +E AE++L EM+ G+
Sbjct: 329 KGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSL 388
Query: 157 YNCFFK-EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+N RG + ++L R+M L PN I + + EIW
Sbjct: 389 FNSVVAWHLRGTGRLDLVLRLIREMLARFL-KPNDALMTACIQELCKSGKHEEAAEIWFQ 447
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
V G LG+++ + LIHGLC+ KEA + M+ G+ ++T+ + +G ++
Sbjct: 448 VLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKA-- 505
Query: 276 LRTWRRLKKKLDEESITFGSEFQNYHFKP 304
K+D E+I + FKP
Sbjct: 506 --------SKMD-EAIQLRDDMIKRGFKP 525
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 15/245 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++I G+CK + A +L E+++ G+ PN V YN L+ G R +
Sbjct: 560 PDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGN------- 612
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK--EKGICPTV 119
I +A + D M+ GI+P +++ ++ Y H + K F + K I V
Sbjct: 613 ---ISDAIGILDTMKYNGIQPTPVTYNSLM--YWMCHAGLVEEVKAVFAQCIVKDIELGV 667
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
YT +++ C G+I++A EM G+ P+ TY Y + A KL+ +
Sbjct: 668 IGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDE 727
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + VP+ +YN LI F ++ +D + E + L D SY + G+
Sbjct: 728 MVSLGI-VPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPW 786
Query: 240 KWKEA 244
KEA
Sbjct: 787 CQKEA 791
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 13/245 (5%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR-VRGIE 81
A+ FL E+ RG P++ T ++L+ + L A KVF EMR + +
Sbjct: 160 ADAFL-ELSARGASPSIKTCSILVEALGCGGQLDV----------ARKVFGEMRDGKTVA 208
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
PDV +++ ++ RA + + L ++ GI PTV TY ++ LC GR+E+A L
Sbjct: 209 PDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRL 268
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
G MV V PS T+ R G + Q + PN YN +IG
Sbjct: 269 KGRMVEGRVRPSIVTFGILISGL-ARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHC 327
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
++++ + + + +Y ++ LC++ + + A + EM+ G++
Sbjct: 328 RKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCS 387
Query: 262 TFETL 266
F ++
Sbjct: 388 LFNSV 392
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 110/260 (42%), Gaps = 16/260 (6%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
R+D+ R + EM+ R ++PN + +C+ + E+ A +++ ++
Sbjct: 401 GRLDLVLRLIREMLARFLKPNDALMTACIQELCKSG------KHEE----AAEIWFQVLG 450
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
+G+ +V + + ++H + + + + L M G+ TY +++ C ++++
Sbjct: 451 KGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDE 510
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A +L +M++ G P T+N F Y + L QMK + L P+I TY +I
Sbjct: 511 AIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGL-KPDIVTYGTII 569
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
+ M E + + L + Y LI G +A M G+
Sbjct: 570 DGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQ 629
Query: 258 PQKVTFETL-----YRGLIQ 272
P VT+ +L + GL++
Sbjct: 630 PTPVTYNSLMYWMCHAGLVE 649
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%)
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G + A + E+ G SPS +T + + + A K++ +M++ P++HT
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
Y +I +D + ++ S + + +Y +L+ LC+ + +EA + M+
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273
Query: 253 EKGLLPQKVTFETLYRGL 270
E + P VTF L GL
Sbjct: 274 EGRVRPSIVTFGILISGL 291
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVK-GSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+I T +IL+ ++D+ R+++ ++ G + D+ +YT +I LC + A
Sbjct: 173 PSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFA 232
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFG 294
E+ G+ P VT+ L L +S + RLK ++ E +TFG
Sbjct: 233 MLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFG 285
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 162/340 (47%), Gaps = 48/340 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNVK+YT L+ C +ID A + LG M ++G P+ VTYN L+G+C+ + NE
Sbjct: 239 MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRV--NEA 296
Query: 61 FEKTIRNAE--------------------KVFDE-------MRVRGIEPDVTSFSIVLHV 93
F++ + + + FDE M R I PDV ++I++
Sbjct: 297 FQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRG 356
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ A + + +L L+ MK+KG P Y +V+K LC G +E A L EM++N +
Sbjct: 357 CAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLD 416
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
+ T R + AM+++ +M E C P + TYN LI F R++ R ++
Sbjct: 417 STTQTIMICGLCKRGLVDEAMQIFDEMGEHG-CDPTVMTYNALIDGFYREGRLEEARMLF 475
Query: 214 NHVK-------------GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+ ++ G+ D +S L+H +C+ + +A + +I+ G++P
Sbjct: 476 HKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKL-----DEESITFGS 295
VT+ TL GL ++ L RL K+L + IT+G+
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 132/320 (41%), Gaps = 44/320 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +Y +++ I +A M+ G PN TYNVL++G+C++
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQG-------- 221
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+FDEM RGI P+V ++++L A K ++ L MK+KG P T
Sbjct: 222 --MAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVT 279
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + + LC GR+ +A + L + G + + Y+C + + Y+ M
Sbjct: 280 YNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTML 339
Query: 182 EDDLC----------------------------------VPNIHTYNILIGMFMALNRMD 207
E ++ VP+ YN ++ + ++
Sbjct: 340 ERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLE 399
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ + + + L LD + T++I GLC++ EA Q F EM E G P +T+ L
Sbjct: 400 RAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459
Query: 268 RGLIQSDMLRTWRRLKKKLD 287
G + L R L K++
Sbjct: 460 DGFYREGRLEEARMLFHKME 479
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 7/226 (3%)
Query: 66 RNAEKV--FDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
RNA+ V F M P ++ +L + L+L N M G P ATY
Sbjct: 152 RNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYN 211
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ LC G DA ++ EM+ G+ P+ + Y + A++L MK D
Sbjct: 212 VLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMK-D 270
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
C+P+ TYN + + R++ + ++ L L Y+ LI GL + +++ E
Sbjct: 271 KGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDE 330
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK 285
Y+ M+E+ + P V + + RG ++ D L +KKK
Sbjct: 331 GFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKK 376
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 69 EKVFDEM---RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
E +FD + R G+ ++F+ ++ +S A + ++ + M E PT Y ++
Sbjct: 119 EAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTI 178
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+K L G I A L MV G +P+ TYN + A A+K++ +M + +
Sbjct: 179 LKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
+PN+ Y +L+ ++D ++ +K D +Y + GLC+ + EA
Sbjct: 239 -MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAF 297
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQS 273
Q V + + G + L GL Q+
Sbjct: 298 QRLVMLQDGGFALGLKGYSCLIDGLFQA 325
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
R+R + S++L + S H + D L + G+ + + + ++V S GR
Sbjct: 96 RLRSRPLHAHAVSLLLRLSS--HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRN 153
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
DA + M P+A YN K A+ LY +M C PN TYN+
Sbjct: 154 ADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAG-CAPNRATYNV 212
Query: 196 LIGMF----MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251
L+ MA + + M E+ + + ++ YT+L+ LC K EA Q M
Sbjct: 213 LMDGLCKQGMAGDALKMFDEMLDR----GIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSM 268
Query: 252 IEKGLLPQKVTFETLYRGL 270
+KG LP +VT+ GL
Sbjct: 269 KDKGCLPDEVTYNAFLSGL 287
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 120/295 (40%), Gaps = 54/295 (18%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-------HPNER 60
T +I G CK +D A + EM E G +P V+TYN L++G R L H E
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM 480
Query: 61 ------FEKTIRNAEKVFDEMRVR-------------------------GIEPDVTSFSI 89
F + A +V D +R G+ PDV +++
Sbjct: 481 GNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNT 540
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+++ +A ++ ++ KGI P TY +++ L R DA L ++++G
Sbjct: 541 LINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSG 600
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM--- 206
SPS YN + K + A+ L+ +P + + + + ++
Sbjct: 601 SSPSLSIYNSMMRSLCRMKKLSQAINLWLDY------LPKKYNFPVESEVLANAHKEIED 654
Query: 207 ----DMVREIWNHVKGSELG-LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
D VRE+ E G + + YT+ + GLC+ ++ +A + F + E G+
Sbjct: 655 GSLDDGVRELIK--IDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGI 707
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR 51
+P+V Y +LI G CK +D A R E+ +G+ P+ +TY L++G+ R
Sbjct: 532 VPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 162/340 (47%), Gaps = 48/340 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNVK+YT L+ C +ID A + LG M ++G P+ VTYN L+G+C+ + NE
Sbjct: 239 MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRV--NEA 296
Query: 61 FEKTIRNAE--------------------KVFDE-------MRVRGIEPDVTSFSIVLHV 93
F++ + + + FDE M R I PDV ++I++
Sbjct: 297 FQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRG 356
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ A + + +L L+ MK+KG P Y +V+K LC G +E A L EM++N +
Sbjct: 357 CAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLD 416
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
+ T R + AM+++ +M E C P + TYN LI F R++ R ++
Sbjct: 417 STTQTIMICGLCKRGLVDEAMQIFDEMGEHG-CDPTVMTYNALIDGFYREGRLEEARMLF 475
Query: 214 NHVK-------------GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+ ++ G+ D +S L+H +C+ + +A + +I+ G++P
Sbjct: 476 HKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKL-----DEESITFGS 295
VT+ TL GL ++ L RL K+L + IT+G+
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 132/320 (41%), Gaps = 44/320 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +Y +++ I +A M+ G PN TYNVL++G+C+
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCK---------- 219
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A K+FDEM RGI P+V ++++L A K ++ L MK+KG P T
Sbjct: 220 QGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVT 279
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + + LC GR+ +A + L + G + + Y+C + + Y+ M
Sbjct: 280 YNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTML 339
Query: 182 EDDLC----------------------------------VPNIHTYNILIGMFMALNRMD 207
E ++ VP+ YN ++ + ++
Sbjct: 340 ERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLE 399
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ + + + L LD + T++I GLC++ EA Q F EM E G P +T+ L
Sbjct: 400 RAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459
Query: 268 RGLIQSDMLRTWRRLKKKLD 287
G + L R L K++
Sbjct: 460 DGFYREGRLEEARMLFHKME 479
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 5/223 (2%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + F M P ++ +L + L+L N M G P ATY ++
Sbjct: 155 DAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLM 214
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G DA ++ EM+ G+ P+ + Y + A++L MK D C
Sbjct: 215 DGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMK-DKGC 273
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+P+ TYN + + R++ + ++ L L Y+ LI GL + +++ E
Sbjct: 274 LPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFG 333
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK 285
Y+ M+E+ + P V + + RG ++ D L +KKK
Sbjct: 334 YYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKK 376
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 69 EKVFDEM---RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
E +FD + R G+ ++F+ ++ +S A + ++ + M E PT Y ++
Sbjct: 119 EAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTI 178
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+K L G I A L MV G +P+ TYN + A A+K++ +M + +
Sbjct: 179 LKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
+PN+ Y +L+ ++D ++ +K D +Y + GLC+ + EA
Sbjct: 239 -MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAF 297
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQS 273
Q V + + G + L GL Q+
Sbjct: 298 QRLVMLQDGGFALGLKGYSCLIDGLFQA 325
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
R+R + S++L + S H + D L + G+ + + + ++V S GR
Sbjct: 96 RLRSRPLHAHAVSLLLRLSS--HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRH 153
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
DA + M P+A YN K A+ LY +M C PN TYN+
Sbjct: 154 ADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAG-CAPNRATYNV 212
Query: 196 LIGMF----MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251
L+ MA + + M E+ + + ++ YT+L+ LC K EA Q M
Sbjct: 213 LMDGLCKQGMAGDALKMFDEMLDR----GIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSM 268
Query: 252 IEKGLLPQKVTFETLYRGL 270
+KG LP +VT+ GL
Sbjct: 269 KDKGCLPDEVTYNAFLSGL 287
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 120/295 (40%), Gaps = 54/295 (18%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-------HPNER 60
T +I G CK +D A + EM E G +P V+TYN L++G R L H E
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM 480
Query: 61 ------FEKTIRNAEKVFDEMRVR-------------------------GIEPDVTSFSI 89
F + A +V D +R G+ PDV +++
Sbjct: 481 GNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNT 540
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+++ +A ++ ++ KGI P TY +++ L R DA L ++++G
Sbjct: 541 LINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSG 600
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM--- 206
SPS YN + K + A+ L+ +P + + + + ++
Sbjct: 601 SSPSLSIYNSMMRSLCRMKKLSQAINLWLDY------LPKKYNFPVESEVLANAHKEIED 654
Query: 207 ----DMVREIWNHVKGSELG-LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
D VRE+ E G + + YT+ + GLC+ ++ +A + F + E G+
Sbjct: 655 GSLDDGVRELIK--IDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGI 707
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR 51
+P+V Y +LI G CK +D A R E+ +G+ P+ +TY L++G+ R
Sbjct: 532 VPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 145/299 (48%), Gaps = 11/299 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT L+ CK + A + L EM ++G P++VTYNV+LNG+C+
Sbjct: 198 LPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ--------- 248
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + +A + + G EP+ S++IVL A + + + + M KG P V
Sbjct: 249 -EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV 307
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++ LC G +E A E+L +M + G +P++ +YN + +K + AM+ M
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C P+I +YN L+ +D+ E+ + +K L SY +I GL + K
Sbjct: 368 VSRG-CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGK 426
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
KEA + EM KGL P +T+ T+ GL + D + R K+ + I + N
Sbjct: 427 TKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYN 485
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 130/269 (48%), Gaps = 14/269 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +Y +++ G+C ++D A R + +M VEP+ TYN L+ G+C R
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGR------- 181
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA V ++M RG PDV +++I+L + + ++ L+ M +KG P + T
Sbjct: 182 ---TSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVT 238
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V+ +C GR+EDA E L + G P+ +YN K + A KL +M
Sbjct: 239 YNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMA 298
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN+ T+N+LI ++ E+ + + SY L+H C+++K
Sbjct: 299 HKG-CPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKI 357
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+A ++ M+ +G P V++ TL L
Sbjct: 358 HKAMEFVELMVSRGCYPDIVSYNTLLTAL 386
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 67/313 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ G R + AE+ + EM +G PNVVT+N+L++ +CRR + P
Sbjct: 269 PNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEV 328
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+K I A + + M RG PD+ S++ +L R
Sbjct: 329 LEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCR 388
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ ++++ L+ +K+KG P + +Y +V+ L G+ ++A ELL EM G+ P T
Sbjct: 389 NGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIIT 448
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE-IWNH 215
Y+ A+G LC R D + E +
Sbjct: 449 YSTI---------ASG------------LC------------------REDRIEEAVRTF 469
Query: 216 VKGSELGLDLDS--YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
K ++G+ + Y ++ GLC++++ A F MI G +P + T+ L GL
Sbjct: 470 CKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYE 529
Query: 274 DMLRTWRRLKKKL 286
+++ R L +L
Sbjct: 530 GLVKEARELFAQL 542
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 10/229 (4%)
Query: 53 ASLHPNERFEKTIRNAEKVFDEMRVRGIE-PDVTSFSIVLHVYSRAHKPQLSLDKLNFMK 111
A++ P K + + + D RV PDV ++ ++ Y A QL + +
Sbjct: 102 AAVGPCAALIKKLCASGRTADARRVLAASGPDVMVYNAMVAGYCGAG--QLDAAR-RLVA 158
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
+ + P TY ++++ LC GR +A +L +M R G P TY + R
Sbjct: 159 DMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYK 218
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
AMKL +M D C P+I TYN+++ R++ E ++ + SY ++
Sbjct: 219 QAMKLLDEM-HDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIV 277
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY-----RGLIQSDM 275
+ GL ++W++A + EM KG P VTF L RGL++ M
Sbjct: 278 LKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAM 326
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 150/309 (48%), Gaps = 27/309 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA------- 53
+P+V Y +LI G+CK +++D A+R L M+ + P+VVTYN L+NG+C+
Sbjct: 152 VPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARM 211
Query: 54 -----SLHPNE-----------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
PN R + + +A ++ ++M + G +PD+ S++ ++H +R
Sbjct: 212 LIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLARE 271
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+L + +G P V TY ++ L R+ +A EL +V++G+ P A TY
Sbjct: 272 QGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITY 331
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
F A+ + + M E CVP++ ++N +I R+D + + ++
Sbjct: 332 TVFIDGLCKAGRVEDALLMLKDMDEKG-CVPDVVSHNAVINGLCKEKRVDEAEVLLSGME 390
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+ S+ LI G C KWK+A F EM+++G+ P VT+ L GL ++ R
Sbjct: 391 AKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKA---R 447
Query: 278 TWRRLKKKL 286
R+K+ +
Sbjct: 448 QEGRIKEAI 456
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 139/274 (50%), Gaps = 23/274 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +L++G+CK+ ++D A + ++RG P+VVTYN L+NG C+ L
Sbjct: 118 PDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLD----- 172
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+++ M + PDV +++ +++ + + + + +KG P V T
Sbjct: 173 -----EAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVD---EARMLIVDKGFSPNVIT 224
Query: 122 YTSVVKCLC-SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY--- 177
Y++++ LC R+E A +LL +MV NG P +YN + + A+KL+
Sbjct: 225 YSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSV 284
Query: 178 -RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
RQ E P + TYNILI + +R++ E+++ + L D +YT+ I GLC
Sbjct: 285 LRQGYE-----PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC 339
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + ++A +M EKG +P V+ + GL
Sbjct: 340 KAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 373
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 125/278 (44%), Gaps = 49/278 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT I G CK R++ A L +M E+G P+VV++N ++NG+C+
Sbjct: 326 PDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCK---------- 375
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + AE + M +G P+ SF+ ++ RA K + ++ M ++G+ PTV T
Sbjct: 376 EKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVT 435
Query: 122 YTSVVKCLCSC---GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
Y +V LC GRI++A L M+ G P TY+ + A +L
Sbjct: 436 YNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLG 495
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M E C+PN++TYN LI GLC
Sbjct: 496 AM-EAKGCIPNVYTYN-----------------------------------SLISGLCGL 519
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K EA + FV M+EKG +P +T+ T+ L + +M+
Sbjct: 520 DKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMV 557
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 141/297 (47%), Gaps = 20/297 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++ + I G C+ +RI A+ M + G PN +TYN LL+G+C +
Sbjct: 49 DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMS------ 102
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A+ +++ M G PDV +++ +LH + + K +L + ++G P V TY
Sbjct: 103 ----DAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTY 158
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C ++++A+ +L MV + P TYN NG + R +
Sbjct: 159 NALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLC----KNGRVDEARMLIV 214
Query: 183 DDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D PN+ TY+ LI G+ L R++ R++ + + D+ SY LIHGL +Q
Sbjct: 215 DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGV 274
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITF 293
EA + F ++ +G P+ T+ L GL++ D + L K L+ ++IT+
Sbjct: 275 SEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITY 331
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 8/206 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + +LI G C+ + A EM++RGV+P VVTYN+L++G+C+ R
Sbjct: 396 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCK-------ARQ 448
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I+ A +FD M +G PDV ++S ++ +A K + L M+ KG P V T
Sbjct: 449 EGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYT 508
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC ++++A EL MV G P TY ++ + A+ L+
Sbjct: 509 YNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSL 568
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMD 207
E + VP Y LI A+ R+D
Sbjct: 569 EAGV-VPTSGMYFSLIDGLCAVARVD 593
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y++LI G K ++D A R LG M +G PNV TYN L++G+C
Sbjct: 468 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGL-------- 519
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++F M +G PD ++ ++ + +L + E G+ PT
Sbjct: 520 --DKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSG 577
Query: 121 TYTSVVKCLCSCGRIEDAEELL 142
Y S++ LC+ R+++A +LL
Sbjct: 578 MYFSLIDGLCAVARVDEALKLL 599
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 146/318 (45%), Gaps = 44/318 (13%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV LI C+++ +D A +G+M + G++P+ +T+N L+NG+C E
Sbjct: 130 NVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCN----------E 179
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I+ A +F+EM G EP+V S++ V++ + +++ M++ P V TY
Sbjct: 180 GKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTY 239
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC + +A E L EMV G+ P TYN + N A +L+++M
Sbjct: 240 NTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVG 299
Query: 183 --------------DDLCV--------------------PNIHTYNILIGMFMALNRMDM 208
D LC PN +TYN L+ + N+MD
Sbjct: 300 RNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDE 359
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++ + G +L SY +LI+G C+ ++ EA + EM EK L P VT+ TL +
Sbjct: 360 AIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQ 419
Query: 269 GLIQSDMLRTWRRLKKKL 286
GL Q R L K++
Sbjct: 420 GLCQVGRPREALNLFKEM 437
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 164/323 (50%), Gaps = 33/323 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+V Y ++++G+C + +++ A R EM+ R V P+ VT+N+L++G+C+ +
Sbjct: 269 PDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCV 328
Query: 56 ---------HPNER----------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN + A KV M +G P+++S++I+++ Y +
Sbjct: 329 SETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCK 388
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + L+ M EK + P TY+++++ LC GR +A L EM +G+ P
Sbjct: 389 SKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMA 448
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNH 215
Y+ + + A+KL ++M E + PNI Y ILI GMF+A ++++ +E+++
Sbjct: 449 YSILLDGFCKHGHLDEALKLLKEMHERRI-KPNIILYTILIRGMFIA-GKLEVAKELFSK 506
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ + D+ +Y ++I GL ++ EA ++F +M + G LP ++ + +G +Q+
Sbjct: 507 LSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQD 566
Query: 276 LRTWRRL-----KKKLDEESITF 293
T +L K+ +S TF
Sbjct: 567 SSTAIQLIDEMVGKRFSADSSTF 589
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I G CK MA R +M + +PNVVTYN +++ +C+
Sbjct: 199 PNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCK---------- 248
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A + EM RGI PDV +++ +LH + + + M + + P T
Sbjct: 249 DRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVT 308
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V LC G + +A + M G P+A TYN Y + A+K+ M
Sbjct: 309 FNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMI 368
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN+ +YNILI + RM+ + + + + L D +Y+ L+ GLC+ +
Sbjct: 369 GKG-CAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRP 427
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+EA F EM GLLP + + L G + L +L K++ E I
Sbjct: 428 REALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRI 477
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +L+ G+C N++D A + LG MI +G PN+ +YN+L+NG C+
Sbjct: 339 PNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCK---------- 388
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A+++ EM + + PD ++S ++ + +P+ +L+ M G+ P +
Sbjct: 389 SKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMA 448
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ C G +++A +LL EM + P+ Y + A +L+ ++
Sbjct: 449 YSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLS 508
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + P+I TYN++I + D E + ++ D SY ++I G + Q
Sbjct: 509 ADGI-RPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDS 567
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
A Q EM+ K TF+ L
Sbjct: 568 STAIQLIDEMVGKRFSADSSTFQML 592
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 11/231 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y LI G+CK R++ A+R L EM E+ + P+ VTY+ L+ G+C+ P
Sbjct: 374 PNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVG--RP---- 427
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R A +F EM G+ PD+ ++SI+L + + +L L M E+ I P +
Sbjct: 428 ----REALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIIL 483
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ + G++E A+EL ++ +G+ P TYN K ++ A + +R+M
Sbjct: 484 YTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKM- 542
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
EDD +P+ +YN++I F+ ++ + + G D ++ ML+
Sbjct: 543 EDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 132/283 (46%), Gaps = 15/283 (5%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
ID A M+ P+VV + L + ++ K +A + ++M + G
Sbjct: 77 IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKK----------KQYSSAVSLCNQMDLFG 126
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
+ +V S +++++ R ++ + M + GI P T+ +++ LC+ G+I++A
Sbjct: 127 VTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAV 186
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
L EMV +G P+ +YN + A++++R+M E + PN+ TYN +I
Sbjct: 187 GLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKM-EQNRGKPNVVTYNTIIDS 245
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
++ E + + + D+ +Y ++HG C + EA + F EM+ + ++P
Sbjct: 246 LCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPD 305
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
VTF L GL + M+ R + + + E+ G+E Y +
Sbjct: 306 TVTFNILVDGLCKEGMVSEARCVSETMTEK----GAEPNAYTY 344
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y+ L+ G+CK +D A + L EM ER ++PN++ Y +L+ G+ L
Sbjct: 443 LPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEV--- 499
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A+++F ++ GI PD+ ++++++ + + + M++ G P
Sbjct: 500 -------AKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSC 552
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+Y +++ A +L+ EMV S + T+
Sbjct: 553 SYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTF 589
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 131/264 (49%), Gaps = 14/264 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +I G CKI + A+ + + I +G P+V T+N L++G C++ L
Sbjct: 423 PDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLD----- 477
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA ++ D M G+ PDV +++ +L+ +A K + + M EKG P + T
Sbjct: 478 -----NAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIIT 532
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + + C ++E+A L+ EM G++P + K + D +GA +L++++
Sbjct: 533 YNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVD 592
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT--MLIHGLCEKQ 239
E I TYNI+I F M+M +++N K E G DSYT ++I G C+
Sbjct: 593 EQYKFSHTIATYNIMINAFAGKLNMNMAEKLFN--KMCENGFSPDSYTYRVMIDGFCKTG 650
Query: 240 KWKEACQYFVEMIEKGLLPQKVTF 263
+ + IEKGL+P TF
Sbjct: 651 NINSGYSFLLVKIEKGLIPSLTTF 674
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 46/315 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G CK ++ AE +L +M+ G EP+ TYN +++G C+ +
Sbjct: 283 PDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMM------ 336
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+NA+++ + +G PD +++ +++ + +++ N EKG+ P +
Sbjct: 337 ----QNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVL 392
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++VK L G I A +L+ EM NG SP TYN NG K+
Sbjct: 393 CNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVI---------NGLCKIGCVSD 443
Query: 182 EDDLCV--------PNIHTYNILIGMFMAL----NRMDMVREIWNHVKGSELGLDLDSYT 229
D+L + P++ T+N LI + N +++V +WNH + D+ +Y
Sbjct: 444 ADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNH----GVSPDVITYN 499
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
+++GLC+ K+++ F M+EKG +P +T+ L T K + EE
Sbjct: 500 SILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNIL-----------TESFCKARKVEE 548
Query: 290 SITFGSEFQNYHFKP 304
++ E QN P
Sbjct: 549 ALNLIEEMQNKGLTP 563
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 134/265 (50%), Gaps = 16/265 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + +LI G+CK ++D A + M GV P+V+TYN +LNG+C+ +
Sbjct: 457 LPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAG------K 510
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+E + F M +G P++ +++I+ + +A K + +L+ + M+ KG+ P V
Sbjct: 511 YEDVM----GTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVV 566
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+ +++K C G ++ A +L + S + TYN + G+ + N A KL+ +
Sbjct: 567 NFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNK 626
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCE 237
M E+ P+ +TY ++I F ++ + E GL L ++ +++ LC
Sbjct: 627 MCENGFS-PDSYTYRVMIDGFCKTGNINSGYSFL--LVKIEKGLIPSLTTFGRVLNCLCL 683
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVT 262
K++ EA M+ KG++P+ V
Sbjct: 684 KRRVHEAVGIIHLMVHKGIVPEVVN 708
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 20/296 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +T + +C+ +R A R L M +G E + V Y ++ G N R
Sbjct: 143 VPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGF-----YEENHR 197
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E A ++F+EM GI PD+ +F+ ++H R Q S LN + ++G+ P +
Sbjct: 198 VE-----AHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLF 252
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF----KEYRGRKDANGAMKL 176
T ++ C + +A LL + V G++P TYN K ++ + + K+
Sbjct: 253 TVNIFIQGFCQRAMLNEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKM 311
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+ E P+ TYN +I + L M +I D +Y LI+GLC
Sbjct: 312 VNEGYE-----PDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLC 366
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ A F E +EKGL P V TL +GL Q ++ +L ++ E +
Sbjct: 367 QDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCS 422
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 88/224 (39%), Gaps = 48/224 (21%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHV------YSRAHKPQLSLDKLNFMKEKGICPT 118
I+ A VF+ M EP V S++ ++++ + +AHK + M++KGI P
Sbjct: 92 IQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMR------MRDKGIVPD 145
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V T+T +K C R A LL M G SA Y
Sbjct: 146 VYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAY--------------------- 184
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
C +IG F N E++ + G + D+ ++ LIH LC K
Sbjct: 185 -------CT--------VIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRK 229
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+E+ + +++++G+ P T +G Q ML RL
Sbjct: 230 GHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRL 273
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 141/271 (52%), Gaps = 12/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K Y+ L+ GW + + +M+ G +P++VTY ++++ +C+
Sbjct: 207 PDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGR------- 259
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A V +M RG +P +SI++H Y + + ++ M++ GI P V
Sbjct: 260 ---VEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVV 316
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C + E+A ++ +M +G+SP++ T+N + A +++R M
Sbjct: 317 YNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNIILNTLISLGKDDEAYRVFRSMI 376
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P+ TY ++I MF ++++M ++W +++ + + ++++LI+GLC+K +
Sbjct: 377 KR--CKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEV 434
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+AC +MIEKG+ P TF L + L++
Sbjct: 435 SQACVLLEDMIEKGIRPPGSTFGKLRQLLLK 465
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 17/173 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V +Y +LI +CK+ + + A R + +M G+ PN T+N++LN + SL ++
Sbjct: 311 MPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNIILNTLI---SLGKDD- 366
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +VF M ++ +PD ++++++ ++ K +++L +M+ K P++
Sbjct: 367 ------EAYRVFRSM-IKRCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMH 419
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKD 169
T++ ++ LC G + A LL +M+ G+ P T+ KE GRKD
Sbjct: 420 TFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKE--GRKD 470
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 48 GVCRRA--SLHPNERFEKTIRNAEKVFDE---MRVRGIEPDVTSFSIVLHVYSRAHKPQL 102
GVC S H IR + ++D MR G+ +V +F I++ Y+RA K
Sbjct: 100 GVCAHTVRSYHTVVTSLAKIRQYQLMWDVVAIMRKEGV-ANVETFGIIMRKYARAQKLDE 158
Query: 103 SLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
++ N M++ G+ +A + S++ LC + A+E+ +M N SP A+TY+ +
Sbjct: 159 AVYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKM-NNRFSPDAKTYSILLE 217
Query: 163 EYRGRKDANGAMK-LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
+ GR + M+ +Y M C P+I TY I++ R++ + +
Sbjct: 218 GW-GRAPSLPKMREVYSDMLAAG-CQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGC 275
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
Y++L+H + ++A F++M + G++P V + L
Sbjct: 276 QPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNAL 320
>gi|334183891|ref|NP_177483.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806278|sp|Q9FX35.2|PP117_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g73400, mitochondrial; Flags: Precursor
gi|332197336|gb|AEE35457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 568
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 130/264 (49%), Gaps = 15/264 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + L +GWC++ A + L EMIE G +P TY ++ C+
Sbjct: 266 PDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAG-------- 317
Query: 62 EKTIRNAEKVFDEMRVRGIE---PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ A +FD M +G P +F++++ ++ K + + + M G P
Sbjct: 318 --MVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPD 375
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V+TY V++ +C ++++A + L EM G P TYNCF + + + A+KLY
Sbjct: 376 VSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYG 435
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M E C P++ TYN+LI MF ++ D W + + D+++Y +I+GL +
Sbjct: 436 RMVESR-CAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDC 494
Query: 239 QKWKEACQYFVEMIEKGL-LPQKV 261
+ KEAC E++ KGL LP +V
Sbjct: 495 HRAKEACFLLEEVVNKGLKLPYRV 518
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 21/263 (7%)
Query: 31 IERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIV 90
I +P + +N+LL+ +C+ ++ E + MR R ++PD +F+++
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCG----------LVKEGEALLRRMRHR-VKPDANTFNVL 274
Query: 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+ R P+ ++ L M E G P TY + + C G +++A +L M+ G
Sbjct: 275 FFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGS 334
Query: 151 S---PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY-NILIGMFMALNRM 206
+ P+A+T+ A +L +M C+P++ TY +++ GM MA ++
Sbjct: 335 AVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTG-CLPDVSTYKDVIEGMCMA-EKV 392
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D + + + D+ +Y + LCE +K EA + + M+E P T+ L
Sbjct: 393 DEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNML 452
Query: 267 YRGLIQSD----MLRTWRRLKKK 285
+ D TW + K+
Sbjct: 453 ISMFFEMDDPDGAFNTWTEMDKR 475
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +I G C ++D A +FL EM +G P++VTYN L +C
Sbjct: 373 LPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCE--------- 423
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K++ M P V ++++++ ++ P + + M ++ V
Sbjct: 424 -NRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVE 482
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ L C R ++A LL E+V G+ ++ F + K+ M
Sbjct: 483 TYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHM 542
Query: 181 KE 182
K+
Sbjct: 543 KK 544
>gi|11120809|gb|AAG30989.1|AC012396_25 hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 132/271 (48%), Gaps = 15/271 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + L +GWC++ A + L EMIE G +P TY ++ C+
Sbjct: 164 PDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAG-------- 215
Query: 62 EKTIRNAEKVFDEMRVRGIE---PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ A +FD M +G P +F++++ ++ K + + + M G P
Sbjct: 216 --MVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPD 273
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V+TY V++ +C ++++A + L EM G P TYNCF + + + A+KLY
Sbjct: 274 VSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYG 333
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M E C P++ TYN+LI MF ++ D W + + D+++Y +I+GL +
Sbjct: 334 RMVESR-CAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDC 392
Query: 239 QKWKEACQYFVEMIEKGL-LPQKVTFETLYR 268
+ KEAC E++ KGL LP +V L R
Sbjct: 393 HRAKEACFLLEEVVNKGLKLPYRVFDSFLMR 423
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 21/263 (7%)
Query: 31 IERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIV 90
I +P + +N+LL+ +C+ ++ E + MR R ++PD +F+++
Sbjct: 124 IRVKTQPEINAFNMLLDALCKCG----------LVKEGEALLRRMRHR-VKPDANTFNVL 172
Query: 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+ R P+ ++ L M E G P TY + + C G +++A +L M+ G
Sbjct: 173 FFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGS 232
Query: 151 S---PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY-NILIGMFMALNRM 206
+ P+A+T+ A +L +M C+P++ TY +++ GM MA ++
Sbjct: 233 AVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTG-CLPDVSTYKDVIEGMCMA-EKV 290
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D + + + D+ +Y + LCE +K EA + + M+E P T+ L
Sbjct: 291 DEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNML 350
Query: 267 YRGLIQSD----MLRTWRRLKKK 285
+ D TW + K+
Sbjct: 351 ISMFFEMDDPDGAFNTWTEMDKR 373
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +I G C ++D A +FL EM +G P++VTYN L +C
Sbjct: 271 LPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCE--------- 321
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K++ M P V ++++++ ++ P + + M ++ V
Sbjct: 322 -NRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVE 380
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
TY +++ L C R ++A LL E+V G+ ++ F
Sbjct: 381 TYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 421
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 158/328 (48%), Gaps = 50/328 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGE-------------------------------- 29
PNV +YT+LI G CK I+ A+ E
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEM 255
Query: 30 ---MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTS 86
M E GV PN+ TYN ++N +C+ + ++A KVFDEMR RG+ ++ +
Sbjct: 256 YEKMQEHGVFPNLYTYNCVMNQLCK----------DGRTKDAFKVFDEMRERGVSCNIVT 305
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
++ ++ R K + ++ MK I P + TY +++ CS G++ A L ++
Sbjct: 306 YNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLK 365
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G+SPS TYN + + D +GA K+ ++M+E + P+ TY ILI F + M
Sbjct: 366 SRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGI-KPSKVTYTILIDTFARSDNM 424
Query: 207 DMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+ ++ + ++ ELGL D+ +Y++LIHG C K + EA + F M+EK L P +V +
Sbjct: 425 ETAIQLRSSME--ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYN 482
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDEESIT 292
T+ G + RL + ++E+ +
Sbjct: 483 TMILGYCKEGSSYRALRLFRDMEEKELA 510
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 137/286 (47%), Gaps = 11/286 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V + +I G C+ I+ + L E+ E G PNVV Y L++G C++
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGE-------- 213
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I A+ +F EM G+ + ++++++H + + + M+E G+ P + TY
Sbjct: 214 --IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTY 271
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
V+ LC GR +DA ++ EM GVS + TYN AN A K+ QMK
Sbjct: 272 NCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK- 330
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ PN+ TYN LI F ++ ++ + +K L L +Y +L+ G C K
Sbjct: 331 SYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTS 390
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
A + EM E+G+ P KVT+ L +SD + T +L+ ++E
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEE 436
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y ++ CK R A + EM ERGV N+VTYN L+ G+CR + NE
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCRE--MKANE-- 321
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A KV D+M+ I P++ +++ ++ + K +L +K +G+ P++ T
Sbjct: 322 ------ANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V C G A +++ EM G+ PS TY + + A++L M+
Sbjct: 376 YNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSME 435
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L VP++HTY++LI F +M+ ++ + L + Y +I G C++
Sbjct: 436 ELGL-VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSS 494
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + F +M EK L P ++ L R L + L+ L +K+ + I
Sbjct: 495 YRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGI 544
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 60/212 (28%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +LI G+C + ++ A ++ RG+ P++VTYNVL++G CR+ +
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395
Query: 62 EK-------------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-- 94
K + A ++ M G+ PDV ++S+++H +
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455
Query: 95 -------SRAHKPQL--------------------------SLDKLNFMKEKGICPTVAT 121
SR K + +L M+EK + P VA+
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVAS 515
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Y+ +++ LC ++++AE+L+ +M+ +G+ PS
Sbjct: 516 YSYLIRVLCKERKLKEAEDLVEKMIDSGIDPS 547
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+ LI+G+C +++ A R M+E+ +EPN V YN ++ G C+ S +
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSY---- 495
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP--T 118
A ++F +M + + P+V S+S ++ V + K + + D + M + GI P T
Sbjct: 496 ------RALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDT 549
Query: 119 VATYTSVVKCLCSCGRIEDAEEL 141
+ S K +I DA
Sbjct: 550 ICNLISRAKTDSPVAQIIDASSF 572
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 158/315 (50%), Gaps = 34/315 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PNV +YT+LI G CK I+ A+ EM + G+ N TY VL++G+ +
Sbjct: 196 PNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEM 255
Query: 54 -------SLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ PN + N A K+FDEMR RG+ ++ +++ ++ R
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + ++ MK GI P + TY +++ C G++ A L ++ G+SPS T
Sbjct: 316 EMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + D +GA K+ ++M+E + P+ TY ILI F ++ M+ ++ + +
Sbjct: 376 YNILVSGFCKKGDTSGAGKVVKEMEERGI-KPSKITYTILIDTFARMDNMEKAIQLRSPM 434
Query: 217 KGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ ELGL D+ +Y++LIHG C K + EA + F M+ K L P KV + T+ G +
Sbjct: 435 E--ELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEG 492
Query: 275 ----MLRTWRRLKKK 285
LR +R +++K
Sbjct: 493 SSYRALRLFREMEEK 507
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 11/290 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V + +I G C+ I+ + L E+ E G PNVV Y L++G C+R
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGE-------- 213
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I A+ +F EM G+ + ++++++H + + + M+E G+ P + TY
Sbjct: 214 --IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
V+ C GR +DA +L EM GVS + TYN AN A K+ QMK
Sbjct: 272 NCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS 331
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D + PN+ TYN LI F + ++ + +K L L +Y +L+ G C+K
Sbjct: 332 DGIN-PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + EM E+G+ P K+T+ L + D + +L+ ++E +T
Sbjct: 391 GAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLT 440
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 11/262 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y ++ CK R A + EM ERGV N+VTYN L+ G+CR + NE
Sbjct: 266 PNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCRE--MKANE-- 321
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A KV D+M+ GI P++ +++ ++ + K +L +K +G+ P++ T
Sbjct: 322 ------ANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V C G A +++ EM G+ PS TY + + A++L M+
Sbjct: 376 YNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPME 435
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L P++HTY++LI F +M+ ++ + +L + Y ++ G C++
Sbjct: 436 ELGL-TPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSS 494
Query: 242 KEACQYFVEMIEKGLLPQKVTF 263
A + F EM EK L P ++
Sbjct: 495 YRALRLFREMEEKELPPNVASY 516
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +LI G+C + ++ A ++ RG+ P++VTYN+L++G C++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGD------- 388
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A KV EM RGI+P +++I++ ++R + ++ + M+E G+ P V T
Sbjct: 389 ---TSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHT 445
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ C G++ +A L MV + P+ YN Y + A++L+R+M+
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREME 505
Query: 182 EDDLCVPNIHTYNILI 197
E +L PN+ +Y +I
Sbjct: 506 EKEL-PPNVASYRYMI 520
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 127/266 (47%), Gaps = 12/266 (4%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
++Y +I + + +D + + EM+++G P +N LL V +S + RF
Sbjct: 95 RLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRF--- 151
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
F+E +++ ++ DV SF IV+ A + + S D L ++E G P V YT+
Sbjct: 152 -------FNESKIK-VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTT 203
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ C G IE A++L EM + G+ + TY ++Y +M+ED
Sbjct: 204 LIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDG 263
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
+ PN++TYN ++ R ++++ ++ + ++ +Y LI GLC + K EA
Sbjct: 264 V-FPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEA 322
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGL 270
+ +M G+ P +T+ TL G
Sbjct: 323 NKVMDQMKSDGINPNLITYNTLIDGF 348
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT LI + +++ ++ A + M E G+ P+V TY+VL++G C + ++
Sbjct: 406 PSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMN----- 460
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F M + +EP+ ++ ++ Y + +L M+EK + P VA+
Sbjct: 461 -----EASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
Y +++ LC + ++AE L+ +M+ G+ PS N
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILN 552
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 162/340 (47%), Gaps = 48/340 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNVK+YT L+ C +ID A + LG M ++G P+ VTYN L+G+C+ + NE
Sbjct: 239 MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRV--NEA 296
Query: 61 FEKTIRNAE--------------------KVFDE-------MRVRGIEPDVTSFSIVLHV 93
F++ + + + FDE M R I PDV ++I++
Sbjct: 297 FQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRG 356
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ A + + +L L+ MK+KG P Y +V+K LC G +E A L EM++N +
Sbjct: 357 CAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLD 416
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
+ T R + AM+++ +M E C P + TYN LI F R++ R ++
Sbjct: 417 STTQTIMICGLCKRGLVDEAMQIFDEMGEHG-CDPTVMTYNALIDGFYREGRLEEARMLF 475
Query: 214 NHVK-------------GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+ ++ G+ D +S L+H +C+ + +A + +I+ G++P
Sbjct: 476 HKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKL-----DEESITFGS 295
VT+ TL GL ++ L RL K+L + IT+G+
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 132/320 (41%), Gaps = 44/320 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +Y +++ I +A M+ G PN TYNVL++G+C+
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCK---------- 219
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A K+FDEM RGI P+V ++++L A K ++ L MK+KG P T
Sbjct: 220 QGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVT 279
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + + LC GR+ +A + L + G + + Y+C + + Y+ M
Sbjct: 280 YNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTML 339
Query: 182 EDDLC----------------------------------VPNIHTYNILIGMFMALNRMD 207
E ++ VP+ YN ++ + ++
Sbjct: 340 ERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLE 399
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ + + + L LD + T++I GLC++ EA Q F EM E G P +T+ L
Sbjct: 400 RAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459
Query: 268 RGLIQSDMLRTWRRLKKKLD 287
G + L R L K++
Sbjct: 460 DGFYREGRLEEARMLFHKME 479
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 5/223 (2%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + F M P ++ +L + L+L N M G P ATY ++
Sbjct: 155 DAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLM 214
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G DA ++ EM+ G+ P+ + Y + A++L MK D C
Sbjct: 215 DGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMK-DKGC 273
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+P+ TYN + + R++ + ++ L L Y+ LI GL + +++ E
Sbjct: 274 LPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFG 333
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK 285
Y+ M+E+ + P V + + RG ++ D L +KKK
Sbjct: 334 YYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKK 376
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 69 EKVFDEM---RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
E +FD + R G+ ++F+ ++ +S A + ++ + M E PT Y ++
Sbjct: 119 EAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTI 178
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+K L G I A L MV G +P+ TYN + A A+K++ +M + +
Sbjct: 179 LKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
+PN+ Y +L+ ++D ++ +K D +Y + GLC+ + EA
Sbjct: 239 -MPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAF 297
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQS 273
Q V + + G + L GL Q+
Sbjct: 298 QRLVMLQDGGFALGLKGYSCLIDGLFQA 325
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
R+R + S++L + S H + D L + G+ + + + ++V S GR
Sbjct: 96 RLRSRPLHAHAVSLLLRLSS--HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRH 153
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
DA + M P+A YN K A+ LY +M C PN TYN+
Sbjct: 154 ADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAG-CAPNRATYNV 212
Query: 196 LIGMF----MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251
L+ MA + + M E+ + + ++ YT+L+ LC K EA Q M
Sbjct: 213 LMDGLCKQGMAGDALKMFDEMLDR----GIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSM 268
Query: 252 IEKGLLPQKVTFETLYRGL 270
+KG LP +VT+ GL
Sbjct: 269 KDKGCLPDEVTYNAFLSGL 287
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 119/294 (40%), Gaps = 52/294 (17%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-------HPNER 60
T +I G CK +D A + EM E G +P V+TYN L++G R L H E
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM 480
Query: 61 ------FEKTIRNAEKVFDEMRVR-------------------------GIEPDVTSFSI 89
F + A +V D +R G+ PDV +++
Sbjct: 481 GNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNT 540
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+++ +A ++ ++ KGI P TY +++ L R DA L ++++G
Sbjct: 541 LINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSG 600
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM--- 206
SPS YN + K + A+ L+ +P + + + + ++
Sbjct: 601 SSPSLSIYNSMMRSLCRMKKLSQAINLWLDY------LPKKYNFPVESEVLANAHKEIED 654
Query: 207 ----DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
D VRE+ + + + YT+ + GLC+ ++ +A + F + E G+
Sbjct: 655 GSLDDGVRELIK-IDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGI 707
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR 51
+P+V Y +LI G CK +D A R E+ +G+ P+ +TY L++G+ R
Sbjct: 532 VPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 148/301 (49%), Gaps = 18/301 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI +C ++ A L EMI + + P+V T+++L++ +C+
Sbjct: 183 PNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG-------- 234
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+NA+++F M G+ P+V S++I+++ + + +++ L M K + P T
Sbjct: 235 ----KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVT 290
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GRI A L+ EM G TY ++ + A L+ +MK
Sbjct: 291 YNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK 350
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + P ++TY LI R+ +E++ H+ +D+ +YT++I GLC++ +
Sbjct: 351 ERGI-QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMF 409
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG-SEFQNY 300
EA +M + G +P VTFE + R L + D +KL E I G F+N+
Sbjct: 410 DEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKD----ENDKAEKLLHEMIAKGLLGFRNF 465
Query: 301 H 301
H
Sbjct: 466 H 466
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 130/318 (40%), Gaps = 44/318 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +T+L+ G C + F +++ + + N V+Y LLNG+C+
Sbjct: 78 PNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGE------- 130
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R A K+ + R P+V +S ++ + + D + M + I P V T
Sbjct: 131 ---TRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVIT 187
Query: 122 YTSVVKCLCSCGRIEDAEELLGE---------------------------------MVRN 148
Y +++ C G++ A LL E MV+
Sbjct: 188 YNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQIFHAMVQM 247
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
GV+P+ +YN K + AM L R+M ++ VP+ TYN LI R+
Sbjct: 248 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNM-VPDTVTYNSLIDGLCKSGRITS 306
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+ N + D+ +YT L+ LC+ Q +A F++M E+G+ P T+ L
Sbjct: 307 ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 366
Query: 269 GLIQSDMLRTWRRLKKKL 286
GL + L+ + L + L
Sbjct: 367 GLCKGGRLKNAQELFQHL 384
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 135/280 (48%), Gaps = 13/280 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ + LI +C + ++ + LG++++ G PN +T+ L+ G+C + + F
Sbjct: 44 NLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFH 103
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
D++ + + + S+ +L+ + + + ++ L ++++ P V Y
Sbjct: 104 ----------DKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMY 153
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++++ LC + +A +L EM + P+ TYN + GA L +M
Sbjct: 154 SAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMIL 213
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
++ P+++T++ILI + ++I++ + + ++ SY ++I+GLC+ ++
Sbjct: 214 KNI-NPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 270
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
EA EM+ K ++P VT+ +L GL +S + + L
Sbjct: 271 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNL 310
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y SLI G CK RI A + EM RG +VVTY LL+ +C+ N+
Sbjct: 285 VPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCK------NQN 338
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K A +F +M+ RGI+P + +++ ++ + + + + + + KG C V
Sbjct: 339 LDK----ATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVW 394
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ LC G ++A + +M NG P+A T+ + + + + A KL +M
Sbjct: 395 TYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454
>gi|125544731|gb|EAY90870.1| hypothetical protein OsI_12477 [Oryza sativa Indica Group]
Length = 601
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 135/276 (48%), Gaps = 13/276 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+++ YT+L+YGWC++ ++D A+ L M V P+VV +N LL G + RFE
Sbjct: 194 SLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFV------ADGRFE 247
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A ++ EM RG P+ S++ ++ + ++ M+ KG P TY
Sbjct: 248 ----DAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTY 303
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++V C GRI E L M R G+ A Y FF + ++ ++L +M+E
Sbjct: 304 GTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRE 363
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P++ YN++I + L +WN ++ +EL +D++ +++ GL +
Sbjct: 364 CR-CPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTGLVGQGVLV 422
Query: 243 EACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
EAC YF +M+ +GL PQ + L L++ L
Sbjct: 423 EACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKL 458
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G + AE+L+ E+ + + S Y + + A + +MK ++ P++
Sbjct: 175 GHVAVAEQLVEEL-QPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEV-APDVVV 232
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
+N L+ F+A R + E+ ++ + SYT L+ GL + + EA + FVEM
Sbjct: 233 FNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMR 292
Query: 253 EKGLLPQKVTFETLYRGLIQS 273
KG P VT+ TL ++
Sbjct: 293 RKGCAPDSVTYGTLVTAFCKA 313
>gi|222625312|gb|EEE59444.1| hypothetical protein OsJ_11623 [Oryza sativa Japonica Group]
Length = 589
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 135/276 (48%), Gaps = 13/276 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+++ YT+L+YGWC++ ++D A+ L M V P+VV +N LL G + RFE
Sbjct: 182 SLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFV------ADGRFE 235
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A ++ EM RG P+ S++ ++ + ++ M+ KG P TY
Sbjct: 236 ----DAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTY 291
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++V C GRI E L M R G+ A Y FF + ++ ++L +M+E
Sbjct: 292 GTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRE 351
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P++ YN++I + L +WN ++ +EL +D++ +++ GL +
Sbjct: 352 CR-CPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTGLVGQGVLV 410
Query: 243 EACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
EAC YF +M+ +GL PQ + L L++ L
Sbjct: 411 EACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKL 446
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G + AE+L+ E+ + + S Y + + A + +MK ++ P++
Sbjct: 163 GHVAVAEQLVEEL-QPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEV-APDVVV 220
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
+N L+ F+A R + E+ ++ + SYT L+ GL + + EA + FVEM
Sbjct: 221 FNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMR 280
Query: 253 EKGLLPQKVTFETLYRGLIQS 273
KG P VT+ TL ++
Sbjct: 281 RKGCAPDSVTYGTLVTAFCKA 301
>gi|115455091|ref|NP_001051146.1| Os03g0728200 [Oryza sativa Japonica Group]
gi|50428716|gb|AAT77067.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108710874|gb|ABF98669.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113549617|dbj|BAF13060.1| Os03g0728200 [Oryza sativa Japonica Group]
Length = 601
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 135/276 (48%), Gaps = 13/276 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+++ YT+L+YGWC++ ++D A+ L M V P+VV +N LL G + RFE
Sbjct: 194 SLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFV------ADGRFE 247
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A ++ EM RG P+ S++ ++ + ++ M+ KG P TY
Sbjct: 248 ----DAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTY 303
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++V C GRI E L M R G+ A Y FF + ++ ++L +M+E
Sbjct: 304 GTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRE 363
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P++ YN++I + L +WN ++ +EL +D++ +++ GL +
Sbjct: 364 CR-CPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTGLVGQGVLV 422
Query: 243 EACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
EAC YF +M+ +GL PQ + L L++ L
Sbjct: 423 EACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKL 458
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G + AE+L+ E+ + + S Y + + A + +MK ++ P++
Sbjct: 175 GHVAVAEQLVEEL-QPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEV-APDVVV 232
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
+N L+ F+A R + E+ ++ + SYT L+ GL + + EA + FVEM
Sbjct: 233 FNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMR 292
Query: 253 EKGLLPQKVTFETLYRGLIQS 273
KG P VT+ TL ++
Sbjct: 293 RKGCAPDSVTYGTLVTAFCKA 313
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 147/291 (50%), Gaps = 22/291 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y L G+C R MA R L EM++RG+EP +VTYN +L G R
Sbjct: 203 PDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFR---------- 252
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I+ A + + EM+ R E DV S++ V+H + A + + + + M ++G+ P VAT
Sbjct: 253 SNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVAT 312
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGV-SPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++++ C +++A + EMVR GV SP+ T+N + D A+ +M
Sbjct: 313 YNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERM 372
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E L ++ TYN++I F ++ E++ + +LD+Y +LI + ++K
Sbjct: 373 GEHGLRA-SVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTYNVLISAMFVRKK 431
Query: 241 WKE---ACQYFVEMIEKGLLPQKVTFETLYRGLI-------QSDMLRTWRR 281
++ A + +EM+E+G LP+K TF + GL+ D+LR R
Sbjct: 432 SEDLVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITGNQDFAKDILRMQSR 482
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 102/208 (49%), Gaps = 2/208 (0%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + MR + P + +I+ Y+ KP ++ M E G+ + ++ +++
Sbjct: 119 SAWALVGRMRSLRLGPSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLL 178
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC R+E A +LL +++ P +YN Y +K A+++ ++M + +
Sbjct: 179 DILCKSNRVETAHDLL-RTLKSRFRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGI- 236
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P + TYN ++ + N++ E + +K + +D+ SYT +IHG E + K+A +
Sbjct: 237 EPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKR 296
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSD 274
F EM+++G+ P T+ L + + D
Sbjct: 297 VFDEMVKEGVAPNVATYNALIQVFCKKD 324
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 146/277 (52%), Gaps = 13/277 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+VK +TSL+YGWCK ++ A+ L +M + G+EP++V YN LL G + +
Sbjct: 259 PSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMG----- 313
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A + EMR + EP+ TS+++++ + + + + M+ G V T
Sbjct: 314 -----DAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVT 368
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C G+I+ ELL EM++ G P+ Y + +++ +L +M+
Sbjct: 369 YSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQ 428
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P++ YN +I + L + ++WN ++ S L +D++ ++I+G E+
Sbjct: 429 KIG-CAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCL 487
Query: 242 KEACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
EAC+YF EM+ +GL PQ T + L L++++ L
Sbjct: 488 VEACEYFKEMVGRGLFTAPQYGTLKELMNSLLRAEKL 524
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 134/271 (49%), Gaps = 12/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT LI CK R++ A R EM G + +VVTY+ L++G C+
Sbjct: 329 PNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGK------- 381
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I+ ++ DEM +G P+ + ++ + + + + + +N M++ G P ++
Sbjct: 382 ---IKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSI 438
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V++ C G +++ +L EM +G+SP +T+ + + A + +++M
Sbjct: 439 YNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMV 498
Query: 182 EDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE-LGLDLDSYTMLIHGLCEKQ 239
L P T L+ + +++M ++ WN + S+ L++ ++T+ IH L K
Sbjct: 499 GRGLFTAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIWIHALFSKG 558
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
KEAC + ++M++K L+P TF L GL
Sbjct: 559 HVKEACSFCIDMMDKDLMPNPDTFAKLMHGL 589
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 115/260 (44%), Gaps = 11/260 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y ++I ++ + + EM R P+++T V + + R AS + +
Sbjct: 159 YKAMIKVLSRMRQFGAVWALIEEM--RQENPHLITPQVFVILMRRFAS-------ARMVH 209
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +V DEM G EPD F +L + + + M+ + P+V +TS++
Sbjct: 210 KAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYRWK-PSVKHFTSLL 268
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G++ +A+ +L +M G+ P YN Y A L ++M+ C
Sbjct: 269 YGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKR-C 327
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN +Y +LI R++ ++ ++ + D+ +Y+ LI G C+ K K +
Sbjct: 328 EPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYE 387
Query: 247 YFVEMIEKGLLPQKVTFETL 266
EMI++G P +V ++ +
Sbjct: 388 LLDEMIQQGHFPNQVIYQHI 407
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 27/293 (9%)
Query: 2 PNVKMYTSLIYGWCK---INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
P++K YT L+ GW + + R+D R EM + G EP+VV Y +++N C+
Sbjct: 230 PDIKSYTILLEGWGQELNLLRVDEVNR---EMKDEGFEPDVVAYGIIINAHCKA------ 280
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+++E+ IR F+EM R +P F +++ K +L+ K G
Sbjct: 281 KKYEEAIR----FFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLE 336
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
TY ++V C R+EDA + + EM GV P+A TY+ + + A ++Y+
Sbjct: 337 APTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQ 396
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M C P + TY I++ MF R+DM +IW+ +KG + + ++ LI LC +
Sbjct: 397 TMS----CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHE 452
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-------SDMLRTWRRLKK 284
K EAC+YF EM++ G+ P F L + L+ +D++ RL+K
Sbjct: 453 NKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRK 505
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 10/228 (4%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF-MKEKGICPTVAT 121
+ + +A+KVFD+M+ + EPD+ S++I+L + + L +D++N MK++G P V
Sbjct: 211 RNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN-LLRVDEVNREMKDEGFEPDVVA 269
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C + E+A EM + PS + K N A++ + + K
Sbjct: 270 YGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSK 329
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ TYN L+G + RM+ + + ++ +G + +Y +++H L Q+
Sbjct: 330 SSGFPL-EAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRS 388
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML----RTWRRLKKK 285
KEA + + M P T+E + R + L + W +K K
Sbjct: 389 KEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGK 433
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 100/237 (42%), Gaps = 37/237 (15%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+ D+M+ + + T F+++ Y+RA K + ++ + M+E G + + ++ L
Sbjct: 150 LVDDMKAKKLLSKET-FALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLS 208
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-------------RGRKD-------- 169
+ DA+++ +M + P ++Y + + R KD
Sbjct: 209 KSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVV 268
Query: 170 ANG--------------AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
A G A++ + +M++ + C P+ H + LI + +++ E +
Sbjct: 269 AYGIIINAHCKAKKYEEAIRFFNEMEQRN-CKPSPHIFCSLINGLGSEKKLNDALEFFER 327
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
K S L+ +Y L+ C Q+ ++A + EM KG+ P T++ + LI+
Sbjct: 328 SKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIR 384
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 142/281 (50%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V ++T+LI G C+I + ++A L EM G P+VVT N L+ G C +
Sbjct: 108 PDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGK------- 160
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I K+F M +G++PDV S+SI ++ Y + K +++ + M +G+ P T
Sbjct: 161 ---IDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVT 217
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K LC R DA+ L +M G+SP Y+ + + + + + L+++M+
Sbjct: 218 YNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQ 277
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P++ Y I+I ++ +E+ + + L D+ +YT L+ GLC +
Sbjct: 278 R-RLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSI 336
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
EA + F +M E G +P ++ L +G +Q + T +L
Sbjct: 337 IEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQL 377
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 11/293 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV + LI +C ++ +D G+ ++RG +P+VV + L++GVCR
Sbjct: 74 NVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTEL----- 128
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A + EM + G PDV + + ++ Y K + M KG+ P V +Y
Sbjct: 129 -----AAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSY 183
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ + C +I++A EL EM GV P+A TYN K A L+R+M
Sbjct: 184 SIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCA 243
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L P+I Y+ L+ F +D + ++ ++ + DL YT++I+G+C +K K
Sbjct: 244 CGLS-PDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVK 302
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
+A + +I +GL P T+ L GL + + RL +K++E+ GS
Sbjct: 303 DAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGS 355
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 46/267 (17%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+D A M++R +P ++ +N LL+ V R +++E + +F EM RG
Sbjct: 21 LDDALASFNRMLDRNPQPPIIEFNRLLSSVVRM------KKYETVV----SLFKEMEFRG 70
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
I+ +V + SI+++ + H ++G P V +T+++ +C G+ E A
Sbjct: 71 IKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAA 130
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
LL EM G CVP++ T N L+
Sbjct: 131 GLLKEMGLVG------------------------------------CVPDVVTCNSLMRG 154
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ + ++D VR+I++ + L D+ SY++ I+G C+ +K EA + F EM +G++P
Sbjct: 155 YCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPN 214
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKL 286
VT+ TL + L Q+ R + L +K+
Sbjct: 215 AVTYNTLIKALCQALRPRDAQVLFRKM 241
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 106/222 (47%), Gaps = 26/222 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---- 56
+P+V SL+ G+C +ID + M+ +G++P+V +Y++ +NG C+ +
Sbjct: 142 VPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAME 201
Query: 57 -----------PNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
PN T+ R+A+ +F +M G+ PD+ ++S +L +
Sbjct: 202 LFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFC 261
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ L M+ + + P + YT ++ +C +++DA+E+L ++ G+ P
Sbjct: 262 KQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVH 321
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
TY A++L+R+M+ED C+P +YN+L+
Sbjct: 322 TYTALVDGLCREGSIIEALRLFRKMEEDG-CMPGSCSYNVLL 362
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
P+V Y+ I G+CK+ +ID A EM RGV PN VTYN L+ +C+
Sbjct: 178 PDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVL 237
Query: 53 ------ASLHPNERFEKTIRNA----------EKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
L P+ T+ + +F EM+ R ++PD+ ++I+++ R
Sbjct: 238 FRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCR 297
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ K + + + L+ + +G+ P V TYT++V LC G I +A L +M +G P + +
Sbjct: 298 SRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCS 357
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKE 182
YN + D + ++L +M +
Sbjct: 358 YNVLLQGCLQHNDTSTVVQLIHEMAD 383
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 137/283 (48%), Gaps = 14/283 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +I G+ ++D A EM++RG++PNVVTY +++G+C+
Sbjct: 201 PNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCK---------- 250
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + AE VF +M +G++PD +++ ++H Y K + + L M G+ P T
Sbjct: 251 AQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT 310
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC+ GR +A L M+R G+ P+ Y Y + + L M
Sbjct: 311 YGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMV 370
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ L P+ H +NI+ + +D I+N +K L D+ +Y LI LC+ +
Sbjct: 371 ENGLS-PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRV 429
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
+A F +M+ +G+ P F +L GL D W + K+
Sbjct: 430 DDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVD---KWEKAKE 469
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y LI+G+ + L M+E G+ P+ +N++ ++A
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA-------- 392
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A +F++M+ +G+ PDV ++ ++ + + ++ K N M +G+ P +
Sbjct: 393 --MIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S+V LC+ + E A+E EM+ G+ P +N + A +L M+
Sbjct: 451 FNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLME 510
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P + +Y LIG + R+D + + + L D +Y L+HG C +
Sbjct: 511 RVG-TRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+A F EM+ G+ P VT+ T+ GL +
Sbjct: 570 DDAYGVFREMLRNGITPGVVTYSTILHGLFTT 601
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 142/318 (44%), Gaps = 28/318 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ ++ SL+YG C +++ + A+ F EM+ +G+ P+VV +N +L +C + + +R
Sbjct: 446 PNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRL 505
Query: 62 ----EKT---------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E+ I A K D M G++PD +++ +LH Y R
Sbjct: 506 IDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCR 565
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + M GI P V TY++++ L + R +A+EL M+ +G +
Sbjct: 566 AGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWI 625
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + A KL++ + D + I T+NI+IG R + ++ +
Sbjct: 626 YNIILNGLSKNNCVDEAFKLFQSLCSKDFQL-EITTFNIMIGALFKSGRNEDAMHLFATI 684
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI-QSDM 275
L D+ +Y ++ L E+ +E F M + G P L R L+ + D+
Sbjct: 685 SSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDI 744
Query: 276 LRTWRRLKKKLDEESITF 293
R L KLDE++ +
Sbjct: 745 TRAGAYL-CKLDEKNFSL 761
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 126/284 (44%), Gaps = 9/284 (3%)
Query: 10 LIYGWCKINRI-DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
L+ G C R+ + + + M E G P+VV+YN LL G C NE+ +
Sbjct: 135 LLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFC-------NEKRAEEALEL 187
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
+ + + R P+V S++IV++ + + + + M ++GI P V TYT+V+
Sbjct: 188 LHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDG 247
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC ++ AE + +M+ GV P +TYNC Y +++ +M L P
Sbjct: 248 LCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGL-KP 306
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
+ +TY L+ R R +++ + + ++ Y +LIHG K E
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
M+E GL P F ++ + M+ + K+ ++ ++
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLS 410
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 122/275 (44%), Gaps = 8/275 (2%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE-RFEKTIRNAEKVFDEMRVR 78
+D A + ++ +V+ +N LL V R + + E + ++ E ++
Sbjct: 30 LDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
+ PD ++SI++ + R + + + + G ++K LC R+ +A
Sbjct: 90 -VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEA 148
Query: 139 EELL-GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD--LCVPNIHTYNI 195
++L M G +P +YN K + K A A++L M + C PN+ +Y I
Sbjct: 149 MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAI 208
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
+I F ++D ++ + + ++ +YT +I GLC+ Q A F +MI+KG
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ P T+ L G + + W+ + + L+E S
Sbjct: 269 VKPDNDTYNCLIHGYLS---IGKWKEVVRMLEEMS 300
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 151/296 (51%), Gaps = 16/296 (5%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI G+CK+ R++ A ++ + I G EP+ +TYN +NG+C+ + +A
Sbjct: 165 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN----------DHVGHAL 214
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
KV D M G +PDV +++IV++ + + + + LN M ++G P + T+ +++ L
Sbjct: 215 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 274
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C+ R+E+A +L ++ GVSP T+N D + A++L+ +MK C P+
Sbjct: 275 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG-CTPD 333
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
TYN LI +L ++ ++ ++ + +Y +I GLC+K + +EA + F
Sbjct: 334 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 393
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTW-----RRLKKKLDEESITFGSEFQNY 300
+M +G+ +TF TL GL + + + + + L +IT+ S +Y
Sbjct: 394 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 449
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 127/265 (47%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y + + G C+ + + A + + M++ G +P+V TYN+++N +C+ L
Sbjct: 192 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE----- 246
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ + ++M RG PD+T+F+ ++ ++ + +LD + KG+ P V T
Sbjct: 247 -----EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 301
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G A L EM +G +P TYN A+ L + M
Sbjct: 302 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM- 360
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C + TYN +I R++ E+++ + + + ++ LI GLC+ +K
Sbjct: 361 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 420
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+A + +MI +GL P +T+ ++
Sbjct: 421 DDAFELINQMISEGLQPNNITYNSI 445
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 141/289 (48%), Gaps = 13/289 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ + +LI C NR++ A ++ +GV P+V T+N+L+N +C+ H
Sbjct: 261 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHL--- 317
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP-TV 119
A ++F+EM+ G PD +++ ++ K +LD L M+ G CP +
Sbjct: 318 -------ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG-CPRST 369
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY +++ LC RIE+AEE+ +M G+S +A T+N K + A +L Q
Sbjct: 370 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQ 429
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + L PN TYN ++ + + +I + + +D+ +Y LI+GLC+
Sbjct: 430 MISEGL-QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 488
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ + A + M KG+ P + + + L + + +R L +++ E
Sbjct: 489 RTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 537
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 131/316 (41%), Gaps = 50/316 (15%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y L+ + +++ + E EM RG++P+VVT+N L+ +CR +
Sbjct: 56 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCR----------AHQV 105
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
R A + +EM RG+ PD T+F+ ++ + + +L M E G T T +
Sbjct: 106 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 165
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--- 182
+ C GR+EDA + + + +G P TYN F A+K+ M +
Sbjct: 166 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 225
Query: 183 -------------------------------DDLCVPNIHTYNILIGMFMALNRMDMVRE 211
D C+P+I T+N LI NR++ +
Sbjct: 226 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 285
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ V + D+ ++ +LI+ LC+ A + F EM G P +VT+ TL
Sbjct: 286 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI---- 341
Query: 272 QSDMLRTWRRLKKKLD 287
D L + +L K LD
Sbjct: 342 --DNLCSLGKLGKALD 355
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 138/294 (46%), Gaps = 22/294 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +LI C + ++ A L +M G + +TYN +++G+C++
Sbjct: 332 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR------- 384
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I AE+VFD+M ++GI + +F+ ++ + K + + +N M +G+ P T
Sbjct: 385 ---IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 441
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C G I+ A ++L M NG TY A+K+ R M+
Sbjct: 442 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 501
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG-SELGLDLDS--YTMLIHGLCEK 238
+ P YN ++ +L R + +R+ + + +E+G D+ Y ++ GLC
Sbjct: 502 IKGM-RPTPKAYNPVL---QSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRG 557
Query: 239 Q-KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM----LRTWRRLKKKLD 287
KEA + +EM++KG +P+ +F L GL+ M +R + +K+D
Sbjct: 558 GGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVD 611
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 23/257 (8%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G++ + V YN LLN + + + + E V+ EM RGI+PDV +F+ ++
Sbjct: 49 GIQADTVVYNHLLNVLVEGSKM----------KLLESVYSEMGARGIKPDVVTFNTLMKA 98
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
RAH+ + ++ L M +G+ P T+T++++ G IE A + M+ G S +
Sbjct: 99 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 158
Query: 154 AETYNCFFKEY--RGR-KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
T N Y GR +DA G Y Q + D P+ TYN + + +
Sbjct: 159 KVTVNVLINGYCKLGRVEDALG----YIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 214
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ + + D+ +Y ++++ LC+ + +EA +M+++G LP TF TL L
Sbjct: 215 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 274
Query: 271 IQSDMLRTWRRLKKKLD 287
T RL++ LD
Sbjct: 275 C------TGNRLEEALD 285
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 16/253 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + +LI G CK +ID A + +MI G++PN +TYN +L C++
Sbjct: 403 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD-------- 454
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I+ A + + M G E DV ++ +++ +A + Q++L L M+ KG+ PT Y
Sbjct: 455 --IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 512
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMK 181
V++ L I DA L EM G P A TY F+ RG A +M
Sbjct: 513 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 572
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMD-MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P ++ +L + L D +R I ++ +L +S I G + +K
Sbjct: 573 DKGF-IPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDL---RESDVSAIRGYLKIRK 628
Query: 241 WKEACQYFVEMIE 253
+ +A F +E
Sbjct: 629 FYDALATFGRFLE 641
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL-YRQMKEDDLCVPNIHTYNILIGM 199
L+ EM R G + F Y G++ + A+ L Q++ + YN L+ +
Sbjct: 4 LVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNV 63
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ ++M ++ +++ + + D+ ++ L+ LC + + A EM +G+ P
Sbjct: 64 LVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPD 123
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ TF TL +G ++ + R+K ++ E
Sbjct: 124 ETTFTTLMQGFVEEGSIEAALRVKARMLE 152
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 140/287 (48%), Gaps = 11/287 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++K YT L+ GW + M + EM++ G++P+VV Y L++ C+
Sbjct: 263 VPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCD---- 318
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVF EM G P + ++++ + +L K G V
Sbjct: 319 ------EAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVP 372
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +VV C + + A +++ EM + G+ P+A TY+ + + A ++++M
Sbjct: 373 TCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRM 432
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P ++TY +++GMF + R+DM ++W +K + + ++ LI+GLC + +
Sbjct: 433 GMEG-CEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLINGLCFENR 491
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+EAC YF EM++KG+ P F L LI+ + + + KLD
Sbjct: 492 LEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISLAQDMALKLD 538
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 85/195 (43%), Gaps = 1/195 (0%)
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
R +G SF ++ + + +L + M+ +G+ + T+ +V+ ++
Sbjct: 153 RQQGFRYTAESFHNLIEALGKIKQFRLVWSLVEAMRCRGLL-SKDTFRLIVRRYARARKV 211
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
++A E +M G+ YN K A ++++MK + VP++ TY +
Sbjct: 212 KEAVETFEKMSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTV 271
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
L+ + + M++ ++ + + + D+ +Y LI C+ K EA + F EM G
Sbjct: 272 LMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANG 331
Query: 256 LLPQKVTFETLYRGL 270
+P + L GL
Sbjct: 332 CMPSPHVYCMLINGL 346
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 151/296 (51%), Gaps = 16/296 (5%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI G+CK+ R++ A ++ + I G EP+ +TYN +NG+C+ + +A
Sbjct: 257 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ----------NDHVGHAL 306
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
KV D M G +PDV +++IV++ + + + + LN M ++G P + T+ +++ L
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C+ R+E+A +L ++ GVSP T+N D + A++L+ +MK C P+
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG-CTPD 425
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
TYN LI +L ++ ++ ++ + +Y +I GLC+K + +EA + F
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTW-----RRLKKKLDEESITFGSEFQNY 300
+M +G+ +TF TL GL + + + + + L +IT+ S +Y
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 541
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 127/265 (47%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y + + G C+ + + A + + M++ G +P+V TYN+++N +C+ L
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE----- 338
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ + ++M RG PD+T+F+ ++ ++ + +LD + KG+ P V T
Sbjct: 339 -----EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 393
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G A L EM +G +P TYN A+ L + M
Sbjct: 394 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM- 452
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C + TYN +I R++ E+++ + + + ++ LI GLC+ +K
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+A + +MI +GL P +T+ ++
Sbjct: 513 DDAFELINQMISEGLQPNNITYNSI 537
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 141/289 (48%), Gaps = 13/289 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ + +LI C NR++ A ++ +GV P+V T+N+L+N +C+ H
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHL--- 409
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP-TV 119
A ++F+EM+ G PD +++ ++ K +LD L M+ G CP +
Sbjct: 410 -------ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG-CPRST 461
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY +++ LC RIE+AEE+ +M G+S +A T+N K + A +L Q
Sbjct: 462 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQ 521
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + L PN TYN ++ + + +I + + +D+ +Y LI+GLC+
Sbjct: 522 MISEGL-QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ + A + M KG+ P + + + L + + +R L +++ E
Sbjct: 581 RTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 629
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 131/316 (41%), Gaps = 50/316 (15%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y L+ + +++ + E EM RG++P+VVT+N L+ +CR +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCR----------AHQV 197
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
R A + +EM RG+ PD T+F+ ++ + + +L M E G T T +
Sbjct: 198 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 257
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--- 182
+ C GR+EDA + + + +G P TYN F A+K+ M +
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317
Query: 183 -------------------------------DDLCVPNIHTYNILIGMFMALNRMDMVRE 211
D C+P+I T+N LI NR++ +
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ V + D+ ++ +LI+ LC+ A + F EM G P +VT+ TL
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI---- 433
Query: 272 QSDMLRTWRRLKKKLD 287
D L + +L K LD
Sbjct: 434 --DNLCSLGKLGKALD 447
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 138/294 (46%), Gaps = 22/294 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +LI C + ++ A L +M G + +TYN +++G+C++
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR------- 476
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I AE+VFD+M ++GI + +F+ ++ + K + + +N M +G+ P T
Sbjct: 477 ---IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 533
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C G I+ A ++L M NG TY A+K+ R M+
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG-SELGLDLDS--YTMLIHGLCEK 238
+ P YN ++ +L R + +R+ + + +E+G D+ Y ++ GLC
Sbjct: 594 IKGM-RPTPKAYNPVL---QSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRG 649
Query: 239 Q-KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM----LRTWRRLKKKLD 287
KEA + +EM++KG +P+ +F L GL+ M +R + +K+D
Sbjct: 650 GGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVD 703
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 23/257 (8%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G++ + V YN LLN + + + + E V+ EM RGI+PDV +F+ ++
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKM----------KLLESVYSEMGARGIKPDVVTFNTLMKA 190
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
RAH+ + ++ L M +G+ P T+T++++ G IE A + M+ G S +
Sbjct: 191 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250
Query: 154 AETYNCFFKEY--RGR-KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
T N Y GR +DA G Y Q + D P+ TYN + + +
Sbjct: 251 KVTVNVLINGYCKLGRVEDALG----YIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ + + D+ +Y ++++ LC+ + +EA +M+++G LP TF TL L
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Query: 271 IQSDMLRTWRRLKKKLD 287
T RL++ LD
Sbjct: 367 C------TGNRLEEALD 377
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 16/253 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + +LI G CK +ID A + +MI G++PN +TYN +L C++
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD-------- 546
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I+ A + + M G E DV ++ +++ +A + Q++L L M+ KG+ PT Y
Sbjct: 547 --IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMK 181
V++ L I DA L EM G P A TY F+ RG A +M
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 664
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMD-MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P ++ +L + L D +R I ++ +L +S I G + +K
Sbjct: 665 DKGF-IPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDL---RESDVSAIRGYLKIRK 720
Query: 241 WKEACQYFVEMIE 253
+ +A F +E
Sbjct: 721 FYDALATFGRFLE 733
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 86/191 (45%), Gaps = 2/191 (1%)
Query: 100 PQLSLDKLNF-MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
P +L LN + P Y +++ L + G ++ + L+ EM R G +
Sbjct: 54 PDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVH 113
Query: 159 CFFKEYRGRKDANGAMKL-YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
F Y G++ + A+ L Q++ + YN L+ + + ++M ++ +++ +
Sbjct: 114 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 173
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+ D+ ++ L+ LC + + A EM +G+ P + TF TL +G ++ +
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 233
Query: 278 TWRRLKKKLDE 288
R+K ++ E
Sbjct: 234 AALRVKARMLE 244
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 151/296 (51%), Gaps = 16/296 (5%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI G+CK+ R++ A ++ + I G EP+ +TYN +NG+C+ + +A
Sbjct: 257 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ----------NDHVGHAL 306
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
KV D M G +PDV +++IV++ + + + + LN M ++G P + T+ +++ L
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C+ R+E+A +L ++ GVSP T+N D + A++L+ +MK C P+
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG-CTPD 425
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
TYN LI +L ++ ++ ++ + +Y +I GLC+K + +EA + F
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTW-----RRLKKKLDEESITFGSEFQNY 300
+M +G+ +TF TL GL + + + + + L +IT+ S +Y
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 541
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 127/265 (47%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y + + G C+ + + A + + M++ G +P+V TYN+++N +C+ L
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE----- 338
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ + ++M RG PD+T+F+ ++ ++ + +LD + KG+ P V T
Sbjct: 339 -----EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 393
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G A L EM +G +P TYN A+ L + M
Sbjct: 394 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM- 452
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C + TYN +I R++ E+++ + + + ++ LI GLC+ +K
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+A + +MI +GL P +T+ ++
Sbjct: 513 DDAFELINQMISEGLQPNNITYNSI 537
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 141/289 (48%), Gaps = 13/289 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ + +LI C NR++ A ++ +GV P+V T+N+L+N +C+ H
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHL--- 409
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP-TV 119
A ++F+EM+ G PD +++ ++ K +LD L M+ G CP +
Sbjct: 410 -------ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG-CPRST 461
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY +++ LC RIE+AEE+ +M G+S +A T+N K + A +L Q
Sbjct: 462 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQ 521
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + L PN TYN ++ + + +I + + +D+ +Y LI+GLC+
Sbjct: 522 MISEGL-QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ + A + M KG+ P + + + L + + +R L +++ E
Sbjct: 581 RTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 629
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 131/316 (41%), Gaps = 50/316 (15%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y L+ + +++ + E EM RG++P+VVT+N L+ +CR +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCR----------AHQV 197
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
R A + +EM RG+ PD T+F+ ++ + + +L M E G T T +
Sbjct: 198 RTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 257
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--- 182
+ C GR+EDA + + + +G P TYN F A+K+ M +
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317
Query: 183 -------------------------------DDLCVPNIHTYNILIGMFMALNRMDMVRE 211
D C+P+I T+N LI NR++ +
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ V + D+ ++ +LI+ LC+ A + F EM G P +VT+ TL
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI---- 433
Query: 272 QSDMLRTWRRLKKKLD 287
D L + +L K LD
Sbjct: 434 --DNLCSLGKLGKALD 447
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 138/294 (46%), Gaps = 22/294 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +LI C + ++ A L +M G + +TYN +++G+C++
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR------- 476
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I AE+VFD+M ++GI + +F+ ++ + K + + +N M +G+ P T
Sbjct: 477 ---IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 533
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C G I+ A ++L M NG TY A+K+ R M+
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG-SELGLDLDS--YTMLIHGLCEK 238
+ P YN ++ +L R + +R+ + + +E+G D+ Y ++ GLC
Sbjct: 594 IKGM-RPTPKAYNPVL---QSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRG 649
Query: 239 Q-KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM----LRTWRRLKKKLD 287
KEA + +EM++KG +P+ +F L GL+ M +R + +K+D
Sbjct: 650 GGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVD 703
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 23/257 (8%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G++ + V YN LLN + + + + E V+ EM RGI+PDV +F+ ++
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKM----------KLLESVYSEMGARGIKPDVVTFNTLMKA 190
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
RAH+ + ++ L M +G+ P T+T++++ G IE A + M+ G S +
Sbjct: 191 LCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250
Query: 154 AETYNCFFKEY--RGR-KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
T N Y GR +DA G Y Q + D P+ TYN + + +
Sbjct: 251 KVTVNVLINGYCKLGRVEDALG----YIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ + + D+ +Y ++++ LC+ + +EA +M+++G LP TF TL L
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Query: 271 IQSDMLRTWRRLKKKLD 287
T RL++ LD
Sbjct: 367 C------TGNRLEEALD 377
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 16/253 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + +LI G CK +ID A + +MI G++PN +TYN +L C++
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD-------- 546
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I+ A + + M G E DV ++ +++ +A + Q++L L M+ KG+ PT Y
Sbjct: 547 --IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMK 181
V++ L I DA L EM G P A TY F+ RG A +M
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 664
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMD-MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P ++ +L + L D +R I ++ +L +S I G + +K
Sbjct: 665 DKGF-IPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDL---RESDVSAIRGYLKIRK 720
Query: 241 WKEACQYFVEMIE 253
+ +A F +E
Sbjct: 721 FYDALATFGRFLE 733
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 86/191 (45%), Gaps = 2/191 (1%)
Query: 100 PQLSLDKLNF-MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
P +L LN + P Y +++ L + G ++ + L+ EM R G +
Sbjct: 54 PDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVH 113
Query: 159 CFFKEYRGRKDANGAMKL-YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
F Y G++ + A+ L Q++ + YN L+ + + ++M ++ +++ +
Sbjct: 114 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 173
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+ D+ ++ L+ LC + + A EM +G+ P + TF TL +G ++ +
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 233
Query: 278 TWRRLKKKLDE 288
R+K ++ E
Sbjct: 234 AALRVKARMLE 244
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 151/296 (51%), Gaps = 16/296 (5%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI G+CK+ R++ A ++ + I G EP+ +TYN +NG+C+ + +A
Sbjct: 257 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ----------NDHVGHAL 306
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
KV D M G +PDV +++IV++ + + + + LN M ++G P + T+ +++ L
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C+ R+E+A +L ++ GVSP T+N D + A++L+ +MK C P+
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG-CTPD 425
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
TYN LI +L ++ ++ ++ + +Y +I GLC+K + +EA + F
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTW-----RRLKKKLDEESITFGSEFQNY 300
+M +G+ +TF TL GL + + + + + L +IT+ S +Y
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHY 541
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 126/265 (47%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y + + G C+ + + A + + M++ G +P+V TYN+++N +C+ L
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE----- 338
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ + ++M RG PD+T+F+ ++ ++ + +LD + KG+ P V T
Sbjct: 339 -----EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 393
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G A L EM +G +P TYN A+ L + M
Sbjct: 394 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM- 452
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C + TYN +I R++ E+++ + + + ++ LI GLC+ +K
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+A +MI +GL P +T+ ++
Sbjct: 513 DDAFGLINQMISEGLQPNNITYNSI 537
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 140/289 (48%), Gaps = 13/289 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ + +LI C NR++ A ++ +GV P+V T+N+L+N +C+ H
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHL--- 409
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP-TV 119
A ++F+EM+ G PD +++ ++ K +LD L M+ G CP +
Sbjct: 410 -------ALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG-CPRST 461
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY +++ LC RIE+AEE+ +M G+S +A T+N K + A L Q
Sbjct: 462 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQ 521
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + L PN TYN ++ + + +I + + +D+ +Y LI+GLC+
Sbjct: 522 MISEGL-QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAG 580
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ + A + M KG+ P + + + L + + +R L +++ E
Sbjct: 581 RTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 629
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 131/316 (41%), Gaps = 50/316 (15%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y L+ + +++ + E EM RG++P+VVT+N L+ +CR +
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCR----------AHQV 197
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
R A + +EM RG+ PD T+F+ ++ + + +L M E G T T +
Sbjct: 198 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVL 257
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--- 182
+ C GR+EDA + + + +G P TYN F A+K+ M +
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317
Query: 183 -------------------------------DDLCVPNIHTYNILIGMFMALNRMDMVRE 211
D C+P+I T+N LI NR++ +
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ V + D+ ++ +LI+ LC+ A + F EM G P +VT+ TL
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI---- 433
Query: 272 QSDMLRTWRRLKKKLD 287
D L + +L K LD
Sbjct: 434 --DNLCSLGKLGKALD 447
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 137/294 (46%), Gaps = 22/294 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +LI C + ++ A L +M G + +TYN +++G+C++
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR------- 476
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I AE+VFD+M ++GI + +F+ ++ + K + +N M +G+ P T
Sbjct: 477 ---IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNIT 533
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C G I+ A ++L M NG TY A+K+ R M+
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG-SELGLDLDS--YTMLIHGLCE- 237
+ P YN ++ +L R + +R+ + + +E+G D+ Y ++ GLC
Sbjct: 594 IKGM-RPTPKAYNPVL---QSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRG 649
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM----LRTWRRLKKKLD 287
KEA + +EM++KG +P+ +F L GL+ M +R + +K+D
Sbjct: 650 GGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVD 703
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 23/257 (8%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G++ + V YN LLN + + + + E V+ EM RGI+PDV +F+ ++
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKM----------KLLESVYSEMGARGIKPDVVTFNTLMKA 190
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
RAH+ + ++ L M +G+ P T+T++++ G IE A + M+ G S +
Sbjct: 191 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250
Query: 154 AETYNCFFKEY--RGR-KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
T N Y GR +DA G Y Q + D P+ TYN + + +
Sbjct: 251 KVTVNVLINGYCKLGRVEDALG----YIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ + + D+ +Y ++++ LC+ + +EA +M+++G LP TF TL L
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Query: 271 IQSDMLRTWRRLKKKLD 287
T RL++ LD
Sbjct: 367 C------TGNRLEEALD 377
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 16/253 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + +LI G CK +ID A + +MI G++PN +TYN +L C++
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGD-------- 546
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I+ A + + M G E DV ++ +++ +A + Q++L L M+ KG+ PT Y
Sbjct: 547 --IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMK 181
V++ L I DA L EM G P A TY F+ RG A +M
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 664
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMD-MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P ++ +L + L D +R I ++ +L +S I G + +K
Sbjct: 665 DKGF-IPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDL---RESDVSAIRGYLKIRK 720
Query: 241 WKEACQYFVEMIE 253
+ +A F +E
Sbjct: 721 FYDALATFGRFLE 733
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 86/191 (45%), Gaps = 2/191 (1%)
Query: 100 PQLSLDKLNF-MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
P +L LN + P Y +++ L + G ++ + L+ EM R G +
Sbjct: 54 PDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVH 113
Query: 159 CFFKEYRGRKDANGAMKL-YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
F Y G++ + A+ L Q++ + YN L+ + + ++M ++ +++ +
Sbjct: 114 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 173
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+ D+ ++ L+ LC + + A EM +G+ P + TF TL +G ++ +
Sbjct: 174 ARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 233
Query: 278 TWRRLKKKLDE 288
R+K ++ E
Sbjct: 234 AALRVKARMLE 244
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 133/270 (49%), Gaps = 14/270 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++K YT L+ GW + + GEM + G EP+VV Y +++N C+ +++
Sbjct: 232 PDIKSYTILLEGWGQELNLLRVNEVYGEMKDEGFEPDVVAYGIIINAYCKA------KKY 285
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ +R F+EM R +P F +++ K +L+ K G T
Sbjct: 286 DEAVR----FFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPT 341
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V C R+EDA + + EM G+ P+A TY+ + A ++Y++M
Sbjct: 342 YNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIRMQRTKEAYEVYQKMS 401
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P + TY I++ MF R+DM +IW+ +KG + + ++ LI LC + K
Sbjct: 402 ----CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKL 457
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
EAC+YF EM++ G+ P F L + L+
Sbjct: 458 DEACEYFNEMLDVGIRPPGHLFSRLKQTLL 487
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 108/231 (46%), Gaps = 16/231 (6%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN----FMKEKGICPT 118
+ + +A+KVFD+M+ + EPD+ S++I+L + + +L+L ++N MK++G P
Sbjct: 213 RNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQ----ELNLLRVNEVYGEMKDEGFEPD 268
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V Y ++ C + ++A EM + PS + K N A++ +
Sbjct: 269 VVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFE 328
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ K + TYN L+G + RM+ + + ++ +G + +Y +++H L
Sbjct: 329 RSKSSGFPL-EAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIRM 387
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML----RTWRRLKKK 285
Q+ KEA + + +M P T+E + R + L + W +K K
Sbjct: 388 QRTKEAYEVYQKM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGK 435
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 3/216 (1%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ ++ A F +M G + + + F+ +L + S++ + + MK+K P + +Y
Sbjct: 178 RKVKEAITAFHKMEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKKRFEPDIKSY 237
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T +++ + E+ GEM G P Y Y K + A++ + +M++
Sbjct: 238 TILLEGWGQELNLLRVNEVYGEMKDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQ 297
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ C P+ H + LI + +++ E + K S L+ +Y L+ C Q+ +
Sbjct: 298 RN-CKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRME 356
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
+A + EM KG+ P T++ + LI+ M RT
Sbjct: 357 DAFKTVDEMRSKGIGPNARTYDIILHHLIR--MQRT 390
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 22/163 (13%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR------------RAS 54
Y +L+ +C R++ A + + EM +G+ PN TY+++L+ + R + S
Sbjct: 342 YNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIRMQRTKEAYEVYQKMS 401
Query: 55 LHPN-ERFEKTIR---NAE------KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL 104
P +E +R N E K++DEM+ +G+ P + FS ++ +K +
Sbjct: 402 CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEAC 461
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147
+ N M + GI P ++ + + L GR + +L +M R
Sbjct: 462 EYFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDKVADLAVKMDR 504
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 156/290 (53%), Gaps = 17/290 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YTSLI CK + A + + E+++ G++ NVVTY LL+G+C
Sbjct: 393 PNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE---------- 442
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ AE+VF M G+ P+ +++ ++H + +A + + + D L MKEK I P +
Sbjct: 443 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLL 502
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC+ R+E+A+ L+GE+ +G++ +A Y Y A A+ L +M
Sbjct: 503 YGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML 562
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV-KGSELGL--DLDSYTMLIHGLCEK 238
+ L + TY LI L + +V+E +H + SE+GL ++ YT L+ GLC+
Sbjct: 563 DLGLIATEV-TYCALID---GLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKN 618
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
++ A + F EM++KG++P K+ + L G ++ L+ L+ ++ E
Sbjct: 619 NCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIE 668
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 141/277 (50%), Gaps = 13/277 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI +CK R+ A FL EM G++PNVVTY+ ++ C+
Sbjct: 323 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCK---------- 372
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ A K F +MR + P+ +++ ++ +A +L + + + GI V T
Sbjct: 373 EGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVT 432
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC GR+++AEE+ M+ GV+P+ ETY + K+ A + ++MK
Sbjct: 433 YTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMK 492
Query: 182 EDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E C+ P++ Y ++ +R++ + + +K S + + YT L+ + +
Sbjct: 493 EK--CIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQ 550
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
EA EM++ GL+ +VT+ L GL +S +++
Sbjct: 551 ATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQ 587
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 140/290 (48%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + +L++ K+ R D++ +F +M G++ +V TYN++++ +C+
Sbjct: 218 PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCK---------- 267
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A +F +M+ G PD+ +++ ++ + + + MK+ P V T
Sbjct: 268 EGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVIT 327
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C C R+ A E L EM NG+ P+ TY+ F + A+K + M+
Sbjct: 328 YNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMR 387
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L PN TY LI + ++ + + + L++ +YT L+ GLCE+ +
Sbjct: 388 RVAL-TPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRM 446
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
KEA + F M+ G+ P + T+ L G I++ + + + K++ E+ I
Sbjct: 447 KEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 496
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 135/289 (46%), Gaps = 11/289 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +I CK ++MA +M E G P++VTYN L++G + L
Sbjct: 254 SVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLD------ 307
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+F++M+ +PDV +++ +++ + + + + + L+ MK G+ P V TY
Sbjct: 308 ----ECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTY 363
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ + C G +++A + +M R ++P+ TY + A+KL ++ +
Sbjct: 364 STFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQ 423
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ + N+ TY L+ RM E++ + + + + ++YT L+HG + ++ +
Sbjct: 424 AGIKL-NVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 482
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A EM EK + P + + T+ GL L + L ++ E I
Sbjct: 483 YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGI 531
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 17/193 (8%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CK + A G M E G++PNV Y L++G+C+ N FE
Sbjct: 573 YCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCK------NNCFEV--- 623
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A+K+FDEM +G+ PD +++ ++ + Q +L+ + M E G+ + YT+++
Sbjct: 624 -AKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALI 682
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE---- 182
L G+++ A LL EM+ GV P Y C K+Y + A++L +M +
Sbjct: 683 WGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742
Query: 183 ---DDLCVPNIHT 192
D VP++ T
Sbjct: 743 TGLSDHAVPSVQT 755
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 1/202 (0%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ A + F +MR + P S + +LH S+ + LS M GI +V TY
Sbjct: 201 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 260
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ LC G +E A L +M G +P TYN + + + ++ QMK+ D
Sbjct: 261 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 320
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
C P++ TYN LI F RM E + +K + L ++ +Y+ I C++ +EA
Sbjct: 321 -CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 379
Query: 245 CQYFVEMIEKGLLPQKVTFETL 266
++FV+M L P + T+ +L
Sbjct: 380 IKFFVDMRRVALTPNEFTYTSL 401
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ YT+LI G K + A MIE G+E ++ Y L+ G+
Sbjct: 637 MPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQ------ 690
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A + DEM +G+ PD + ++ Y K +L+ N M ++G+ ++
Sbjct: 691 ----VQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLS 746
Query: 121 TYT 123
+
Sbjct: 747 DHA 749
>gi|15224753|ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334184304|ref|NP_001189552.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g19280
gi|3135258|gb|AAC16458.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251769|gb|AEC06863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251770|gb|AEC06864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 693
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 139/270 (51%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YT++I G+C + R D A ++ G +++ G P++ T +L+ G C R
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI-GACSRFG------ 457
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+I +AE VF M+ G++ DV +++ ++H Y + H+ + ++ M+ GI P VA
Sbjct: 458 ---SISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVA 514
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ + G I++A E++ E++R G PS + + R D A L+ M
Sbjct: 515 TYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM 574
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P++ T + L+ + RM+ ++N + + L D+ Y LIHG C
Sbjct: 575 ADLRM-KPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGD 633
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++AC+ M+++G+LP + T L GL
Sbjct: 634 IEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 25/194 (12%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-HPNERF 61
+V Y +L++G+ K ++++ + EM G+ P+V TYN+L++ + R + NE
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 62 EKTIRNA--------EKVFDEMRVRG----------------IEPDVTSFSIVLHVYSRA 97
+ IR V RG ++PDV + S +LH Y +A
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ + ++ N + + G+ P V Y +++ CS G IE A EL+G MV+ G+ P+ T+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 158 NCFFKEYRGRKDAN 171
+ G++ N
Sbjct: 657 HALVLGLEGKRFVN 670
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 114/294 (38%), Gaps = 49/294 (16%)
Query: 11 IYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEK 70
I G+CK+ + + A + + R PN+ Y+ L+ +C + A
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDM----------LRAST 394
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+F E+ G+ PD ++ ++ Y + + + + G P++ T T ++
Sbjct: 395 IFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
G I DAE + M G+ TYN Y N +L +M+ + P++
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS-PDV 513
Query: 191 HTYNILIGMFMALNRMDMVREI-----------------------------------WNH 215
TYNILI + +D EI W +
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFY 573
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + D+ + + L+HG C+ Q+ ++A F ++++ GL P V + TL G
Sbjct: 574 MADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 115/303 (37%), Gaps = 43/303 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P+ + SL+ +++ +++A F+ M+ RG N ++ + C +
Sbjct: 233 FPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYC------SDGY 286
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC---- 116
F+K ++ M+ GI PD+ +F++ + +A + + L +K GI
Sbjct: 287 FDK----GWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSV 342
Query: 117 ----------------------------PTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
P + Y+S + +CS G + A + E+
Sbjct: 343 SVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFEL 402
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G+ P Y Y + A + + + + P++ T ILIG +
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTSTILIGACSRFGSISD 461
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++ ++K L LD+ +Y L+HG + + + + EM G+ P T+ L
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 269 GLI 271
++
Sbjct: 522 SMV 524
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 104/278 (37%), Gaps = 42/278 (15%)
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + A K+ ++ GI P +L R H +L+ + + M +G A
Sbjct: 214 ERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAV 273
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR---KDANGA---MK 175
+ ++ CS G + ELL M G+ P + F + K+A +K
Sbjct: 274 LSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 176 LYRQMKE--------DDLCV-----------------PNIHTYNILIGMFMALNRMDMVR 210
L+ ++ D C PNI Y+ + + M
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRAS 393
Query: 211 EIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
I+ + ELGL D YT +I G C + +A QYF +++ G P +T T+
Sbjct: 394 TIFQEI--FELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTSTILI 450
Query: 269 GLIQ-----SDMLRTWRRLKKK-LDEESITFGSEFQNY 300
G SD +R +K + L + +T+ + Y
Sbjct: 451 GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 136/296 (45%), Gaps = 26/296 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y +I G C+ NRID A + L M E G P+VVTYN +++G+C+ + +
Sbjct: 408 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 467
Query: 61 FEKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ +RN AEK+ EM G PDV +++I++H +
Sbjct: 468 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 527
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A + SL + M +KG PTV TY+ V+ LC R+ D LL M+ GV+P A
Sbjct: 528 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAI 587
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
Y + A +LY+ MK+ C P + TYN+L+ ++R+D +
Sbjct: 588 VYTSVIDGLCKSDSYDEAYELYKLMKQTG-CAPTVVTYNVLVDKLCKVSRLDEAIHLLEV 646
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
++ D +Y + G + + +A + F M +G P + L L+
Sbjct: 647 MESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLV 702
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 139/286 (48%), Gaps = 11/286 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT L+ CK RI A L +MIE G PNVVTYN L+NG C+ ++
Sbjct: 234 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMD----- 288
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F++M PDV +++I++ Y + +PQ L M + G P T
Sbjct: 289 -----EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 343
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ L G+ DA L M+R PS T+N + + A +L+ Q+
Sbjct: 344 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELF-QLM 402
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C+P+I+TYNI+I NR+D R++ + + D+ +Y ++ GLC+ +
Sbjct: 403 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQV 462
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
EA + + + G VT TL GL +S L +L ++++
Sbjct: 463 DEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREME 508
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 144/316 (45%), Gaps = 26/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PNV Y +LI G+CK+ +D A +M+E P+V TYN+L++G C+
Sbjct: 269 PNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKL 328
Query: 52 -----RASLHPN----ERFEKTIRNAEKVFDEMRV------RGIEPDVTSFSIVLHVYSR 96
+ PN ++ + K D + R +P +F++++ ++ +
Sbjct: 329 LQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 388
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ L+ + M ++G P + TY ++ C RI+DA +LL M G P T
Sbjct: 389 VGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVT 448
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + A ++Y ++ + ++ T + LI R+D ++ +
Sbjct: 449 YNSIVSGLCKASQVDEAYEVYEVLRNGGYFL-DVVTCSTLIDGLCKSRRLDDAEKLLREM 507
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + D+ +YT+LIHG C+ + ++ +F EM++KG +P +T+ + L +S +
Sbjct: 508 ERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARV 567
Query: 277 RTWRRLKKKLDEESIT 292
R L K + E +T
Sbjct: 568 RDGCMLLKTMLERGVT 583
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 135/296 (45%), Gaps = 25/296 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR-----ASLH 56
P+ Y++LI G+CK A R L EM +RG+ P+ YN ++ G+C A +H
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 224
Query: 57 ---------PN--------ERFEKTIR--NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
P+ + K+ R +A + ++M G P+V +++ +++ + +
Sbjct: 225 YRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 284
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
++ N M E P V TY ++ C R +D +LL EMV+ G P+ TY
Sbjct: 285 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 344
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
N A L + M D C P+ T+N++I MF + ++D+ E++ +
Sbjct: 345 NTLMDSLVKSGKYIDAFNLAQMMLRRD-CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT 403
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
D+ +Y ++I G C + +A Q M E G P VT+ ++ GL ++
Sbjct: 404 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKA 459
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 13/259 (5%)
Query: 16 KINRIDMAERFLGEMI-ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
+++ +D A +F + G + + T N LL+ R+ K + A +F
Sbjct: 108 QLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRK----------KKAQEAYDLFKN 157
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
R PD ++S +++ + +A Q + L+ M+++GI P A Y +++K LC GR
Sbjct: 158 HRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGR 217
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
++ A +M RN +PS TY + A + M E C PN+ TYN
Sbjct: 218 VDSALVHYRDMQRN-CAPSVITYTILVDALCKSARISDASLILEDMIEAG-CAPNVVTYN 275
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
LI F L MD ++N + + D+ +Y +LI G C++++ ++ + EM++
Sbjct: 276 TLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKY 335
Query: 255 GLLPQKVTFETLYRGLIQS 273
G P +T+ TL L++S
Sbjct: 336 GCEPNFITYNTLMDSLVKS 354
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 63/250 (25%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT LI+G+CK +++D + F EM+++G P V+TY+++++ +C+ A +
Sbjct: 514 PDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCML 573
Query: 62 EKTI-------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
KT+ A +++ M+ G P V ++++++ +
Sbjct: 574 LKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCK 633
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ ++ L M+ G P TY SV +G SAE
Sbjct: 634 VSRLDEAIHLLEVMESDGCLPDTVTYNSVF---------------------DGFWKSAE- 671
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+ A +L++ MK C P Y++L+ +A +MD EIW
Sbjct: 672 -------------HDKAFRLFQAMKSRG-CSPTPFMYSLLLTKLVAEEKMDQAMEIWE-- 715
Query: 217 KGSELGLDLD 226
+ E G D+D
Sbjct: 716 EALEAGADVD 725
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YTS+I G CK + D A M + G P VVTYNVL++ +C+ + R
Sbjct: 584 PDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVS------RL 637
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ I + + M G PD +++ V + ++ + + MK +G PT
Sbjct: 638 DEAIH----LLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFM 693
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
Y+ ++ L + +++ A E+ E + G E
Sbjct: 694 YSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPE 727
>gi|46518477|gb|AAS99720.1| At2g19280 [Arabidopsis thaliana]
gi|62319953|dbj|BAD94048.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|110738808|dbj|BAF01327.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 693
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 139/270 (51%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YT++I G+C + R D A ++ G +++ G P++ T +L+ G C R
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI-GACSRFG------ 457
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+I +AE VF M+ G++ DV +++ ++H Y + H+ + ++ M+ GI P VA
Sbjct: 458 ---SISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVA 514
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ + G I++A E++ E++R G PS + + R D A L+ M
Sbjct: 515 TYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM 574
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P++ T + L+ + RM+ ++N + + L D+ Y LIHG C
Sbjct: 575 ADLRM-KPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGD 633
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++AC+ M+++G+LP + T L GL
Sbjct: 634 IEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 25/194 (12%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-HPNERF 61
+V Y +L++G+ K ++++ + EM G+ P+V TYN+L++ + R + NE
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 62 EKTIRNA--------EKVFDEMRVRG----------------IEPDVTSFSIVLHVYSRA 97
+ IR V RG ++PDV + S +LH Y +A
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ + ++ N + + G+ P V Y +++ CS G IE A EL+G MV+ G+ P+ T+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 158 NCFFKEYRGRKDAN 171
+ G++ N
Sbjct: 657 HALVLGLEGKRFVN 670
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 114/294 (38%), Gaps = 49/294 (16%)
Query: 11 IYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEK 70
I G+CK+ + + A + + R PN+ Y+ L+ +C + A
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDM----------LRAST 394
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+F E+ G+ PD ++ ++ Y + + + + G P++ T T ++
Sbjct: 395 IFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
G I DAE + M G+ TYN Y N +L +M+ + P++
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS-PDV 513
Query: 191 HTYNILIGMFMALNRMDMVREI-----------------------------------WNH 215
TYNILI + +D EI W +
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFY 573
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + D+ + + L+HG C+ Q+ ++A F ++++ GL P V + TL G
Sbjct: 574 MADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 115/303 (37%), Gaps = 43/303 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P+ + SL+ +++ +++A F+ M+ RG N ++ + C +
Sbjct: 233 FPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYC------SDGY 286
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC---- 116
F+K ++ M+ GI PD+ +F++ + +A + + L +K GI
Sbjct: 287 FDK----GWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSV 342
Query: 117 ----------------------------PTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
P + Y+S + +CS G + A + E+
Sbjct: 343 SVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFEL 402
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G+ P Y Y + A + + + + P++ T ILIG +
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTSTILIGACSRFGSISD 461
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++ ++K L LD+ +Y L+HG + + + + EM G+ P T+ L
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 269 GLI 271
++
Sbjct: 522 SMV 524
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 104/278 (37%), Gaps = 42/278 (15%)
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + A K+ ++ GI P +L R H +L+ + + M +G A
Sbjct: 214 ERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAV 273
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR---KDANGA---MK 175
+ ++ CS G + ELL M G+ P + F + K+A +K
Sbjct: 274 LSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 176 LYRQMKE--------DDLCV-----------------PNIHTYNILIGMFMALNRMDMVR 210
L+ ++ D C PNI Y+ + + M
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRAS 393
Query: 211 EIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
I+ + ELGL D YT +I G C + +A QYF +++ G P +T T+
Sbjct: 394 TIFQEI--FELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTSTILI 450
Query: 269 GLIQ-----SDMLRTWRRLKKK-LDEESITFGSEFQNY 300
G SD +R +K + L + +T+ + Y
Sbjct: 451 GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 147/299 (49%), Gaps = 11/299 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YT+++ G+CK+ I A ++LG+M++RG+ P+V TY +L++ C+ ++
Sbjct: 355 IPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEM--- 411
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
AE +F M G+ PDV S++ +++ Y + Q + + L+ M+ G+ P +
Sbjct: 412 -------AEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLV 464
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ L G + +A+++L E+ R G SP T+ + + + A L+ M
Sbjct: 465 TYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYM 524
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E L P++ T + L+ + M +++ + + L D+ Y LIHG C
Sbjct: 525 SEHHL-EPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGN 583
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+AC MIE G++P +T L G + + R KL + + +G + ++
Sbjct: 584 IDDACHLVSMMIEHGIMPNNITHHALVLGYEKKCVENPVERAAFKLQQLLLKYGIQAED 642
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 23/290 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
P+V YT +I CK++ + A L +M + GV + V+ + +++G C+
Sbjct: 254 PDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDV 313
Query: 54 ----SLHPN----ERF------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK 99
+L PN F + + A KVF +M G+ PD S++ ++ Y +
Sbjct: 314 LEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKD 373
Query: 100 PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC 159
+L L M ++GI P+VATYT ++ C G +E AE L M+ G+ P +YN
Sbjct: 374 ISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNT 433
Query: 160 FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
Y + A +L M+ + P++ TYNILI + ++ ++I + +
Sbjct: 434 LMNGYGKKGHLQKAFELLSMMRSAGVS-PDLVTYNILIHGLIKRGLVNEAKDILDELTRR 492
Query: 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
D+ ++T +I G K ++EA F M E L P VT L G
Sbjct: 493 GFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNG 542
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 127/290 (43%), Gaps = 23/290 (7%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER-- 60
N + + I G+C ID + L EM G++P+VV Y ++++ +C+ + L
Sbjct: 220 NASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSIL 279
Query: 61 FEKT--------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP 100
F+ T + +E+ D + V + P++ F+ +
Sbjct: 280 FKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNM 339
Query: 101 QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
+ M E G+ P +YT+++ C I +A + LG+M++ G+ PS TY
Sbjct: 340 LKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLL 399
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
+ A L+++M + L VP++ +YN L+ + + E+ + ++ +
Sbjct: 400 IDSCCKPGNMEMAEYLFQRMITEGL-VPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAG 458
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ DL +Y +LIHGL ++ EA E+ +G P VTF + G
Sbjct: 459 VSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGF 508
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 28/268 (10%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y L+ + K N +A + + +M + P + N LL + L+ F K
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLK-- 210
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
EM+ +G+ + + S+ + Y L MK GI P V YT V
Sbjct: 211 --------EMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIV 262
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ LC +++A +L +M + GV F +G K+ + + D+
Sbjct: 263 IDSLCKMSLLKEATSILFKMTQMGV---------FLDSVSVSSVVDGYCKVGKSEEAMDV 313
Query: 186 -----CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEK 238
PNI +N I M +++ + E+GL D SYT ++ G C+
Sbjct: 314 LEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDM--CEMGLIPDCFSYTTMMAGYCKV 371
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ A +Y +M+++G+ P T+ L
Sbjct: 372 KDISNALKYLGKMLKRGIRPSVATYTLL 399
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 137/292 (46%), Gaps = 21/292 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PNV Y L+ CK NR+D A + L EM +G +P+ V+Y L++ +C+
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238
Query: 54 --SLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
S P+ E T A ++ DEM +GI+P+V S++ +++ S A +
Sbjct: 239 AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVE 298
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
LSL L M +G P + T+TS++K G +A + M+R GV P+ YN
Sbjct: 299 LSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALM 358
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
++ A+ ++ QM E + C PN+ TY+ LI + +D E+WN +
Sbjct: 359 HGLCSKRSLGDAVSVFNQM-EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGC 417
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ +YT ++ LC + +A M + P VTF T +GL S
Sbjct: 418 HPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGS 469
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 11/261 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ +TSLI G+ A F MI GV PNVV YN L++G+C + SL
Sbjct: 314 PNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLG----- 368
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A VF++M + G P+V ++S ++ Y++A + + N+M G P V
Sbjct: 369 -----DAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVA 423
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +V LC A L+ M P+ T+N F K G + A+K++ QM
Sbjct: 424 YTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMG 483
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN TYN L+ + R + ++ + L+L +Y +I+G C
Sbjct: 484 NSG-CFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542
Query: 242 KEACQYFVEMIEKGLLPQKVT 262
EA + +M+ +G P +T
Sbjct: 543 GEALELLGKMVVRGTKPDAIT 563
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 135/310 (43%), Gaps = 26/310 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
P+V +Y +LI G CK + A + L EM+ +G++PNV++Y ++N + ++
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303
Query: 57 ----------PN-ERFEKTIRN---------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN F I+ A +D M G+ P+V +++ ++H
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCS 363
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ N M+ G CP V TY++++ G ++ A E+ M+ +G P+
Sbjct: 364 KRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVA 423
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y C N A L M+ ++ C PN T+N I R+D ++++ +
Sbjct: 424 YTCMVDVLCRNSMFNQAYCLIENMQVEN-CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
S + +Y L+ L + +++ EA +M +G+ VT+ T+ G + ML
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542
Query: 277 RTWRRLKKKL 286
L K+
Sbjct: 543 GEALELLGKM 552
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 125/307 (40%), Gaps = 44/307 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +L++G C + A +M G PNV TY+ L++G + L
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD---- 403
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +V++ M G P+V +++ ++ V R + + M+ + P
Sbjct: 404 ------GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTV 457
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ + +K LC GR++ A ++ +M +G P+ TYN + A L + M
Sbjct: 458 TFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDM 517
Query: 181 KEDDL---------------CV-------------------PNIHTYNILIGMFMALNRM 206
+ + C P+ T NI+I + ++
Sbjct: 518 EHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKV 577
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ ++ + + + D+ +YT LI G+C +EA Y M+ +G+ P T+ L
Sbjct: 578 NIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVL 637
Query: 267 YRGLIQS 273
R L +
Sbjct: 638 VRHLFSN 644
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 6/209 (2%)
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + + + +M++ GI F V+ Y RA + +L M++ + PTV
Sbjct: 89 EREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKI 148
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ L R + + M ++G+ P+ TYN K +GA KL +M
Sbjct: 149 YNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMS 208
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P+ +Y LI L ++ RE+ S + Y LI+G+C++ +
Sbjct: 209 SKG-CDPDEVSYTTLISSLCKLGKVKEARELAMSFTPS-----VPVYNALINGVCKEYTF 262
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+EA Q EM+ KG+ P +++ T+ L
Sbjct: 263 EEAFQLLDEMMNKGIDPNVISYTTIINAL 291
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y L+ K R A + +M RG+E N+VTYN ++ G C L
Sbjct: 489 PNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLG----- 543
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ +M VRG +PD + +IV+ Y + K +++ ++ + P +
Sbjct: 544 -----EALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIA 598
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
YTS++ +C+ +E+A L M+ G+SP+ T+N + +GA++
Sbjct: 599 YTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQF 653
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 2/194 (1%)
Query: 90 VLHVYSRAHKPQLSLDKL-NFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
VL H L+L+ + K T TY +++ L S ++ + LL +M
Sbjct: 46 VLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLE 105
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G+S S + + YR + A+K + +M +D P + YN ++ + NR M
Sbjct: 106 GISCSEDLFISVIGSYRRAGSSEQALKTFYRM-QDFRVKPTVKIYNHILDALLDENRFQM 164
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+ I++++K + ++ +Y +L+ LC+ + A + VEM KG P +V++ TL
Sbjct: 165 INPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLIS 224
Query: 269 GLIQSDMLRTWRRL 282
L + ++ R L
Sbjct: 225 SLCKLGKVKEAREL 238
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 14/146 (9%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ Y ++IYG+C + A LG+M+ RG +P+ +T N++++ C++
Sbjct: 525 NLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGK-------- 576
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A ++ D + PD+ +++ ++ + ++ L M +GI P VAT+
Sbjct: 577 --VNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATW 634
Query: 123 TSVVKCLCS----CGRIEDAEELLGE 144
+V+ L S G ++ + +LG
Sbjct: 635 NVLVRHLFSNMGHSGAVQFLDAVLGS 660
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 145/307 (47%), Gaps = 11/307 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P +Y +LI G+C+ ++ A G+M R ++P+ +TYN L+NG+C+ ER
Sbjct: 187 VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA------ER 240
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I NA+ + EM+ G+ P V +F+ ++ Y R + + L+ M+E G+ P V
Sbjct: 241 ----ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 296
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y S+V C G+I +A +L +M V P+A+ YN Y + A L +M
Sbjct: 297 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 356
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + + P+I TYN+LI +++ EI N + L D SY LI C +
Sbjct: 357 KSNGIS-PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 415
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
+A M + G+ T+ L GL + L L +K+ + ++ + N
Sbjct: 416 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 475
Query: 301 HFKPYRR 307
+ Y +
Sbjct: 476 MVEAYSK 482
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 15/268 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y ++I G K ++ R +M+ G++PN +TYNVLL+G+CR R
Sbjct: 47 LPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG------R 100
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+T + DEM + + PD ++SI+ SR + L + G+ T+
Sbjct: 101 MGET----SALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGV--TIG 154
Query: 121 TYTS--VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
YT ++ LC G++ AEE+L +V G+ P+ YN Y + GA +
Sbjct: 155 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 214
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
QMK + P+ TYN LI R+ +++ ++ + + ++++ LI
Sbjct: 215 QMKSRHI-KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 273
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ EM E GL P V++ ++
Sbjct: 274 GQLEKCFIVLSEMQENGLKPNVVSYGSI 301
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 137/347 (39%), Gaps = 65/347 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-SLHPNER 60
PN Y L+ G C+ R+ L EM + + P+ TY++L +G+ R S
Sbjct: 83 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSL 142
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F K ++N AE+V + G+ P ++ +++ Y +
Sbjct: 143 FGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 202
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + MK + I P TY +++ LC RI +A++LL EM NGV+P+ ET
Sbjct: 203 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 262
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDL------------------------------- 185
+N Y + +M+E+ L
Sbjct: 263 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 322
Query: 186 ---CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+PN YN +I ++ D + +K + + + +Y +LI GLC + +
Sbjct: 323 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 382
Query: 243 EACQYFVEMIEKGLLPQKVTFETL-----YRGLIQSDMLRTWRRLKK 284
EA + + L+P V++ TL YRG I L +R+ K
Sbjct: 383 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK-ALDLQQRMHK 428
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +I G + R A EM ER V PN +TYN +++G + L R
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
D+M G++P+ +++++L RA + + L+ M + + P T
Sbjct: 73 R----------DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFT 122
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ + L G + L G+ ++NGV+ T + + A ++ + +
Sbjct: 123 YSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLV 182
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L VP YN LI + ++ + +K + D +Y LI+GLC+ ++
Sbjct: 183 NAGL-VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 241
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
A +EM + G+ P TF TL
Sbjct: 242 TNAQDLLMEMQDNGVNPTVETFNTL 266
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 117/271 (43%), Gaps = 11/271 (4%)
Query: 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN +YNV++ G+ R +A +VFDEM R + P+ +++ ++ + +
Sbjct: 13 PNAFSYNVVIAGMWRAGRGG----------DAVEVFDEMTERAVLPNHITYNTMIDGHIK 62
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + M G+ P TY ++ LC GR+ + LL EM + P T
Sbjct: 63 GGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFT 122
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ F D+ + L+ + ++ + + + +T +IL+ ++ + E+ +
Sbjct: 123 YSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGD-YTCSILLNGLCKDGKVSIAEEVLQSL 181
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ L Y LI+G C+ + + A F +M + + P +T+ L GL +++ +
Sbjct: 182 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 241
Query: 277 RTWRRLKKKLDEESITFGSEFQNYHFKPYRR 307
+ L ++ + + E N Y R
Sbjct: 242 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 272
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 150/313 (47%), Gaps = 30/313 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PNV +YT+LI G CK I+ A F +M E G+ N T+ VL+NG+ ++
Sbjct: 195 PNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDL 254
Query: 54 -------SLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
L PN + N A +FDEMR RG+E +V +++ ++ R
Sbjct: 255 FEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCR 314
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + ++ MK+ + P + TY +++ C G ++ A LL ++ NG+SPS T
Sbjct: 315 EERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVT 374
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + Y + G L R+M+ + P+ T +LI ++ L M+ +I++ +
Sbjct: 375 YNILIEGYSKAGNWKGVADLAREMEGRGIS-PSKVTCTVLIDAYVRLQEMEKAFQIYSSM 433
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD-- 274
+ L D+ Y +LIHGLC K KE+ + F M E + P V + T+ G + D
Sbjct: 434 EKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNS 493
Query: 275 --MLRTWRRLKKK 285
LR R ++ K
Sbjct: 494 YRALRLLREMEAK 506
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 21/270 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y L+ +C +I A EM ERGVE NVVTYN L+ G+CR
Sbjct: 265 PNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCR---------- 314
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + AEK+ D+M+ + P++ +++ ++ + + L+ +K G+ P++ T
Sbjct: 315 EERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVT 374
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ G + +L EM G+SPS T Y ++ A ++Y M+
Sbjct: 375 YNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSME 434
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMD---MVREIWN-HVKGSELGLDLDSYTMLIHGLC 236
+ L VP+++ Y +LI G+ M N + + R + HV+ S++ Y +IHG C
Sbjct: 435 KFGL-VPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDV-----IYNTMIHGYC 488
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ A + EM KGL+P ++ ++
Sbjct: 489 KEDNSYRALRLLREMEAKGLVPNVASYSSI 518
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 137/329 (41%), Gaps = 51/329 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGV--EPNVVTYNVLLNGVCRRASLHPN 58
M +Y S+I K +D A F EM+++G+ PN+ +N LL + R
Sbjct: 90 MTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNI--FNSLLGSLVRSNC---- 143
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
FEK A F+E++ R ++ DV SF I++ S L +++ G+ P
Sbjct: 144 --FEK----AWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPN 196
Query: 119 VATYTSVVKCLCSCGRIE-----------------------------------DAEELLG 143
V YT+++ C G IE D +L
Sbjct: 197 VVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFE 256
Query: 144 EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL 203
+M NG+ P+ TYNC EY G A L+ +M+E + N+ TYN LIG
Sbjct: 257 KMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGV-EANVVTYNTLIGGMCRE 315
Query: 204 NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
R+ ++ + +K + + +L +Y LI G C+ +A ++ GL P VT+
Sbjct: 316 ERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTY 375
Query: 264 ETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
L G ++ + L ++++ I+
Sbjct: 376 NILIEGYSKAGNWKGVADLAREMEGRGIS 404
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 10/161 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ T LI + ++ ++ A + M + G+ P+V Y VL++G+C + ++
Sbjct: 405 PSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNM------ 458
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + K+F M +EP ++ ++H Y + +L L M+ KG+ P VA+
Sbjct: 459 ----KESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVAS 514
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
Y+S++ LC G+ E+AE LL +M+ + PSA N K
Sbjct: 515 YSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISK 555
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 137/282 (48%), Gaps = 5/282 (1%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ YT+LI G C +RI A M + G PN +TY L+ G+CR ++ +
Sbjct: 163 IPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALK 222
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + N ++ +P V S+SI++ + + + D MK +G+ PTV
Sbjct: 223 LHQEMLNDSSLYG----INFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVI 278
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+YTS++ C G+ E+A+ L EMV GV P+ T+N A L M
Sbjct: 279 SYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVM 338
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + VPN+ TYN LI F + ++ RE++ + D+ YT+LI+G C+ K
Sbjct: 339 IQRGI-VPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSK 397
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+EA + + M++ G P T+ L GL Q + ++L
Sbjct: 398 VEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 439
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 148/300 (49%), Gaps = 26/300 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
P V YTSLI+G+C + + A+R EM+ +GV+PNVVT+NVL++ +C+
Sbjct: 275 PTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDL 334
Query: 54 -------SLHPN--------ERF--EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ PN E F + +A ++F M +G EPDV ++++++ Y +
Sbjct: 335 LEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCK 394
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + ++ N M + G P V TY +++ L G++ DA++L G M G+
Sbjct: 395 TSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYI 454
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y F AM+L+ ++K ++ + +I +N LI +++ E++ +
Sbjct: 455 YGIFLNGLCKNGCLFEAMELFNKLKSYNIKL-DIECFNCLIDGLCKAGKLETAWELFEKL 513
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
EL D+ +Y ++IH C + +A F +M + G P K+T+ TL RG +S L
Sbjct: 514 PQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKL 573
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 23/262 (8%)
Query: 15 CKINRIDMAE--RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
CK I + +F M+ P + ++ LL+G+ + I++ +VF
Sbjct: 70 CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAK-------------IKHYSQVF 116
Query: 73 ---DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
++MR+ GI PD + +I+L+ ++ L + + +G P + TYT+++K L
Sbjct: 117 YLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGL 176
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV-- 187
C RI A L M + G +P+A TY K + + A+KL+++M D
Sbjct: 177 CMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGI 236
Query: 188 ---PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
P + +Y+I+I R D R+++ +K + + SYT LIHG C KW+EA
Sbjct: 237 NFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEA 296
Query: 245 CQYFVEMIEKGLLPQKVTFETL 266
+ F EM+ +G+ P VTF L
Sbjct: 297 KRLFNEMVNQGVQPNVVTFNVL 318
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 111/225 (49%), Gaps = 11/225 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT LI G+CK ++++ A + M++ G P+V TY LL G+ +
Sbjct: 380 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK------- 432
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A+K+F M+V GI D+ + I L+ + +++ N +K I +
Sbjct: 433 ---VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIEC 489
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G++E A EL ++ + + P TYN E+ A L+++M+
Sbjct: 490 FNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKME 549
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
++ C P+ TY LI F +++ V E+ + + ++ LD++
Sbjct: 550 KNG-CTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVN 593
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 85/209 (40%), Gaps = 7/209 (3%)
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE--DAEELLGEMVRNG 149
H S H L++ NF ++ + C G I A + M+ +
Sbjct: 36 HFSSAVHHKSLNVSPQNFNTPISFQQQLSMFLHN----CKTGNITATQAFQFFHLMMYSN 91
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
+P ++ K + LY QM+ + P+ T NIL+ +NR+
Sbjct: 92 PTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGIS-PDCCTLNILLNCLCNVNRVGEG 150
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + D+ +YT LI GLC + + +A F M + G P +T+ TL +G
Sbjct: 151 LAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKG 210
Query: 270 LIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
L ++ + +L +++ +S +G F+
Sbjct: 211 LCRTGNISIALKLHQEMLNDSSLYGINFK 239
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 139/272 (51%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + +LI+G N+ A + M+ +G +P++VTY V++NG+C+R
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL---- 239
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M +EP V ++ ++ + +L+ M+ KGI P V T
Sbjct: 240 ------AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLC+ GR DA LL +M+ ++P T++ + A KLY +M
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TY+ LI F +R+D ++++ + D+ +Y LI G C+ ++
Sbjct: 354 KRSI-DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+E + F EM ++GL+ VT+ L +GL Q+
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 142/288 (49%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI C R A R L +MIER + P+V T++ L++ +
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK---------- 338
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK++DEM R I+P + ++S +++ + + + FM K P V T
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+E+ E+ EM + G+ + TYN + D + A +++++M
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + PNI TYN L+ +++ ++ +++ S++ + +Y ++I G+C+ K
Sbjct: 459 SDGV-PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++ F + KG+ P V + T+ G + L K++ E+
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 11/276 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+ LI +C+ +++ +A LG+M++ G EPN+VT + LLNG C K I
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH----------SKRIS 168
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + D+M V G +P+ +F+ ++H +K ++ ++ M KG P + TY VV
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G + A LL +M + + P YN K + A+ L+++M+ +
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI- 287
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+ TY+ LI R + + + ++ D+ +++ LI ++ K EA +
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ EM+++ + P VT+ +L G D L +++
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 131/282 (46%), Gaps = 16/282 (5%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
++D A GEM++ P+++ ++ LL+ + + +F+ I E +M+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKM------NKFDVVISLGE----QMQNL 110
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI + ++SI+++ + R + L+L L M + G P + T +S++ C RI +A
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ +M G P+ T+N A+ AM L +M C P++ TY +++
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVN 229
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
D+ + N ++ +L + Y +I GLC+ + +A F EM KG+ P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 259 QKVTFETLYRGLIQ----SDMLRTWRRL-KKKLDEESITFGS 295
VT+ +L L SD R + ++K++ + TF +
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 10/180 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y LI G + DMA+ EM+ GV PN++TYN LL+G+C+ N + E
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK------NGKLE 483
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K A VF+ ++ +EP + +++I++ +A K + D + KG+ P V Y
Sbjct: 484 K----AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C G E+A+ L EM +G P++ YN + D + +L ++M+
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 3/241 (1%)
Query: 52 RASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK 111
R L N E + +A +F EM P + FS +L ++ +K + + M+
Sbjct: 49 REKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ 108
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
GI TY+ ++ C C ++ A +LG+M++ G P+ T + Y K +
Sbjct: 109 NLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 168
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
A+ L QM PN T+N LI G+F+ N+ + + + DL +Y +
Sbjct: 169 EAVALVDQMFVTGY-QPNTVTFNTLIHGLFLH-NKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+++GLC++ A +M + L P + + T+ GL + + L K+++ +
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 291 I 291
I
Sbjct: 287 I 287
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G+C+ + A+ EM E G PN YN L+ RA L +R
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI-----RARLRDGDR- 587
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
+ ++ EMR G D ++ +V ++ + LD L+
Sbjct: 588 ----EASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 630
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 141/287 (49%), Gaps = 11/287 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++K YT L+ GW + M + EM++ G++P+VV Y +L++ C+
Sbjct: 256 IPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCD---- 311
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVF EM G P + ++++ + +L KE G V
Sbjct: 312 ------EAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVP 365
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +V+ C A +++ EM ++G+ P+ TY+ + A L+++M
Sbjct: 366 TCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRM 425
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E D C P ++TY +++GMF + R+DM ++W +K + + ++ LI+GLC + +
Sbjct: 426 -ERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFENR 484
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+EAC YF EM++KG+ P F L L++ + + + ++L+
Sbjct: 485 LEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQRLE 531
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 110/229 (48%), Gaps = 2/229 (0%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG-ICPTVAT 121
+ ++ A + F++M G++ D++ ++ ++ + S++ + + + MK KG P + T
Sbjct: 202 RKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKT 261
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ + + + EM+ G+ P Y + + A+K++ +M+
Sbjct: 262 YTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEME 321
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C+P+ H Y +LI ++ R+D + + K S +++ + +I C ++
Sbjct: 322 ESG-CMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEF 380
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
A + EM + G+ P T++ + LI+S+ + L ++++ +
Sbjct: 381 HHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDG 429
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%)
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
C + T+ +V+ ++++A E +M G+ YN K A
Sbjct: 185 CLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHA 244
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
++++MK +P++ TY +L+ + + M++ ++ + + + D+ +Y MLI
Sbjct: 245 IFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAF 304
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
C+ K EA + F EM E G +P + L GL
Sbjct: 305 CKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGL 339
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 142/284 (50%), Gaps = 14/284 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT+L++ WC+ +D AE+ EM + G+ PNV TY +++ + R
Sbjct: 242 PDVVLYTTLVHAWCRAGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQ------- 294
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++ +M G P+ +F+ ++ + +A + + L N M++ G P + T
Sbjct: 295 ---VPRAQELLCQMMETGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIIT 351
Query: 122 YTSVVKCLCSCGR--IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++ C G+ ++ A ++L +M+ G P T+N K G + A +LY +
Sbjct: 352 YNFLMETHCGKGQSNLDAAMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYER 411
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+E C PN+ TYN+L+ +F MDMV I + + ++++Y LI C +
Sbjct: 412 MQELQ-CKPNVVTYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTYGALIESFCGRG 470
Query: 240 KWKEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
W+ A EM+ EK L P K ++ + L ++ LR L
Sbjct: 471 NWRRAHATLREMVEEKSLKPTKPVYDMVLMLLRKAGQLRKHEEL 514
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 5/154 (3%)
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
A Y +++ L A LL EM + S++ + Y + A +L+R+
Sbjct: 140 ALYAAMIDLLAKHHHFPLARHLLDEMRERSIPVSSQVILAIIRRYVRAGMSPEASELFRR 199
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+E VP+ L+G + +++ K S D+ YT L+H C
Sbjct: 200 MEEYGAGVPDPAVLASLLGALSKKRLAGEAQALFDSYK-SVFPPDVVLYTTLVHAWCRAG 258
Query: 240 KWKEACQYFVEMIEKGLLPQKVTF----ETLYRG 269
+A Q F EM + G++P T+ + +YR
Sbjct: 259 CLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRA 292
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + ++ ++ A R M E +PNVVTYN+L+ +
Sbjct: 383 IPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYNLLMKLFNK--------- 433
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY------SRAHKPQLSLDKLNFMKEKG 114
EK++ ++ +M +G+EP+V ++ ++ + RAH +L ++ ++EK
Sbjct: 434 -EKSMDMVLRIKKDMDAQGVEPNVNTYGALIESFCGRGNWRRAHA---TLREM--VEEKS 487
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+ PT Y V+ L G++ EEL+ M G
Sbjct: 488 LKPTKPVYDMVLMLLRKAGQLRKHEELVELMADRG 522
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFL--GEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
YT LI G+CK+ + M E FL +M+++ V PNVVTY L +G+C++
Sbjct: 428 YTVLIDGYCKVGK--MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGD---------- 475
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ A ++ EM +G+E ++ +++ +++ +A + ++ + M E G+ P V TYT+
Sbjct: 476 VCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTT 535
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ LC ++ A LL EM+ G+ P+ TYN + G +L M E +
Sbjct: 536 IIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN 595
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
+ PN TYN L+ + M EI+ + E+ + ++Y +LI G C+ + KEA
Sbjct: 596 I-HPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
+ EMIEKG ++ L R L + RRL +K+ +E +T + N++
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 139/288 (48%), Gaps = 12/288 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++G+C ++ ++ A + L EM RG+E N V Y ++ +C
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCD---------- 332
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +A +V ++M + G+ D F+ V+ + R + + + M+++G+ T
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC G +++AE +L EM G+ A TY Y A ++ +M
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN+ TY L + E+ + + L L++ +Y LI+GLC+
Sbjct: 453 QKRV-TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKKKLDE 288
++A + ++M E GL P T+ T+ L QS L R L++ LD+
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 12/290 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ ++T+++ G+C+ + A + EM +RG+ + VTY L+NG+CR L
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL------- 406
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ AE+V EM +G++ D ++++++ Y + K + N M +K + P V TY
Sbjct: 407 ---KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T++ LC G + A ELL EM G+ + TYN + AM+ M E
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L P+++TY +IG +D + + + + +Y +L++G C + +
Sbjct: 524 AGL-KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRG-LIQSDMLRTWRRLKKKLDEESI 291
+ M+EK + P T+ +L + I+ +M T K L +E +
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 18/251 (7%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+D A + E+ E+ N +YN+LL +C I++A ++FDEM
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGR----------IKDAHQLFDEM---A 280
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
PDV ++ I++H Y + + ++ L+ M +G+ YTSV+ LC G++ DA
Sbjct: 281 SPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAV 340
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
++ +MV +GV A + + + D A + +M++ L + TY LI
Sbjct: 341 RVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGV-TYTALING 399
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ + ++ L +D +YT+LI G C+ K EA +M++K + P
Sbjct: 400 LCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPN 459
Query: 260 KVTFETLYRGL 270
VT+ L GL
Sbjct: 460 VVTYTALSDGL 470
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 52/226 (23%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
+R GI P S + VL QL + EK C +Y ++K LC+ GR
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAVQL----FQELPEKNTC----SYNILLKALCTAGR 268
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
I+DA +L EM SP P++ TY
Sbjct: 269 IKDAHQLFDEMA----SP-----------------------------------PDVVTYG 289
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
I++ + L+ ++ ++ + + L L+ +YT +I LC++ + +A + +M+
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349
Query: 255 GLLPQKVTFETLYRGLIQSDML---RTW--RRLKKKLDEESITFGS 295
G++ F T+ G + L R W K+ L + +T+ +
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTA 395
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y LI G CK + A F EMIE+G +YN L+ + ++
Sbjct: 632 VPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKK-------- 683
Query: 61 FEKTIRNAEKVFDEMRVRGI--EPDVTSFSIVL 91
K A ++F++MR + EPDV +F I L
Sbjct: 684 --KKFTEARRLFEKMRKERLTAEPDVYNFYIDL 714
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 149/303 (49%), Gaps = 22/303 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T LI G CK ++ A++ L M +G EP+++TYN L+NG+C L
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLE----- 1242
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+F+ + RGI+ +V S++I+++ Y + K + M+ KG+ P+ T
Sbjct: 1243 -----DATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVT 1297
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GR+ A++L EM G TY AM L++ +K
Sbjct: 1298 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PNI ++IL+ +++ + ++ + + L D +Y +LI+GLC K
Sbjct: 1358 KTE-HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGML 1416
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
EA + +M EKG LP +TF + + L++ + + E+I E +N +
Sbjct: 1417 SEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEI-----------HEAIQLLEEMRNRN 1465
Query: 302 FKP 304
F P
Sbjct: 1466 FSP 1468
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 152/339 (44%), Gaps = 51/339 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +Y+SL+ G C+ R+ A F EM RG+ +V TYN L++G+ R
Sbjct: 1117 LPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTW 1176
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F + M RG PD +F+I++ + K + L M+ KG P +
Sbjct: 1177 F----------LNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDIL 1226
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC G++EDA +L + G+ + +YN Y + + A + + +M
Sbjct: 1227 TYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEM 1286
Query: 181 KEDDLCVPNIHTYNILI----------------------GMFMALN-------------R 205
+ L P+ TYN LI G F+ L+
Sbjct: 1287 RPKGL-KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGH 1345
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
++ +++ +K +E +++ +++L+ G+C K +EA + F E+ + GL P + +
Sbjct: 1346 LEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNI 1405
Query: 266 LYRGLIQSDMLRTWRRLKKKLDE-----ESITFGSEFQN 299
L GL ML +L +++E +SITF QN
Sbjct: 1406 LINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQN 1444
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 136/280 (48%), Gaps = 46/280 (16%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +I CK A EMI G+ P+VV Y+ L++G+CR L
Sbjct: 1084 DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRL------- 1136
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A + F EM RGI DV +++ ++H SRA + LN M ++G P T+
Sbjct: 1137 ---KEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTF 1193
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++ LC G++ +A+++L E++R ++G++
Sbjct: 1194 TILIDGLCKEGKVGEAQQIL-ELMR----------------HKGKE-------------- 1222
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P+I TYN L+ + +++ +++ + + L++ SY +LI+G C+ QK
Sbjct: 1223 -----PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID 1277
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
EA ++F EM KGL P VT+ TL L QS +RT ++L
Sbjct: 1278 EAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKL 1317
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 122/254 (48%), Gaps = 11/254 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y LI G+CK +ID A RF EM +G++P+ VTYN L+ +C+
Sbjct: 1259 NVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGR-------- 1310
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+R A+K+F EM+ G ++++ ++L + + ++D +K+ P + +
Sbjct: 1311 --VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVF 1368
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ ++ +C G++E+A + E+ +NG+ P YN + + A+KL QM+E
Sbjct: 1369 SILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE 1428
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C+P+ T+N++I + N + ++ ++ D +ML+ +W
Sbjct: 1429 KG-CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWH 1487
Query: 243 EACQYFVEMIEKGL 256
A ++KG+
Sbjct: 1488 AALVSLPNALQKGV 1501
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 10/249 (4%)
Query: 52 RASLHPNERFEKT--------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLS 103
+ASL P ER+ + + +A K+FD P +F+ +L ++
Sbjct: 906 KASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTV 965
Query: 104 LDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163
+ + GI P + T ++ C CS + + G ++ G P A T K
Sbjct: 966 FPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKG 1025
Query: 164 YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223
A++L+ +M + L + + TY ILI + + ++ +KG+ G
Sbjct: 1026 VWMENGIPDAVQLFDEMTKKGL-LGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKG- 1083
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
D+ +Y M+I LC+ EA F EMI G+LP V + +L GL + L+
Sbjct: 1084 DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFF 1143
Query: 284 KKLDEESIT 292
K+++ I+
Sbjct: 1144 KEMEGRGIS 1152
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI G C + A + L +M E+G P+ +T+NV++ + +
Sbjct: 1398 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLK---------- 1447
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
E I A ++ +EMR R PD S++L + S + +L L +KG+
Sbjct: 1448 ENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 1501
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFL--GEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
YT LI G+CK+ + M E FL +M+++ V PNVVTY L +G+C++
Sbjct: 428 YTVLIDGYCKVGK--MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGD---------- 475
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ A ++ EM +G+E ++ +++ +++ +A + ++ + M E G+ P V TYT+
Sbjct: 476 VCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTT 535
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ LC ++ A LL EM+ G+ P+ TYN + G +L M E +
Sbjct: 536 IIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN 595
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
+ PN TYN L+ + M EI+ + E+ + ++Y +LI G C+ + KEA
Sbjct: 596 I-HPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
+ EMIEKG ++ L R L + RRL +K+ +E +T + N++
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 139/288 (48%), Gaps = 12/288 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++G+C ++ ++ A + L EM RG+E N V Y ++ +C
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCD---------- 332
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +A +V ++M + G+ D F+ V+ + R + + + M+++G+ T
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC G +++AE +L EM G+ A TY Y A ++ +M
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN+ TY L + E+ + + L L++ +Y LI+GLC+
Sbjct: 453 QKRV-TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKKKLDE 288
++A + ++M E GL P T+ T+ L QS L R L++ LD+
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 12/290 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ ++T+++ G+C+ + A + EM +RG+ + VTY L+NG+CR L
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL------- 406
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ AE+V EM +G++ D ++++++ Y + K + N M +K + P V TY
Sbjct: 407 ---KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T++ LC G + A ELL EM G+ + TYN + AM+ M E
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L P+++TY +IG +D + + + + +Y +L++G C + +
Sbjct: 524 AGL-KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRG-LIQSDMLRTWRRLKKKLDEESI 291
+ M+EK + P T+ +L + I+ +M T K L +E +
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 18/251 (7%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+D A + E+ E+ N +YN+LL +C I++A ++FDEM
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGR----------IKDAHQLFDEM---A 280
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
PDV ++ I++H Y + + ++ L+ M +G+ YTSV+ LC G++ DA
Sbjct: 281 SPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAV 340
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
++ +MV +GV A + + + D A + +M++ L + TY LI
Sbjct: 341 RVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGV-TYTALING 399
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ + ++ L +D +YT+LI G C+ K EA +M++K + P
Sbjct: 400 LCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPN 459
Query: 260 KVTFETLYRGL 270
VT+ L GL
Sbjct: 460 VVTYTALSDGL 470
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 52/226 (23%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
+R GI P S + VL QL + EK C +Y ++K LC+ GR
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAVQL----FQELPEKNTC----SYNILLKALCTAGR 268
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
I+DA +L EM SP P++ TY
Sbjct: 269 IKDAHQLFDEMA----SP-----------------------------------PDVVTYG 289
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
I++ + L+ ++ ++ + + L L+ +YT +I LC++ + +A + +M+
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349
Query: 255 GLLPQKVTFETLYRGLIQSDML---RTW--RRLKKKLDEESITFGS 295
G++ F T+ G + L R W K+ L + +T+ +
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTA 395
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y LI G CK + A F EMIE+G +YN L+ + ++
Sbjct: 632 VPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKK-------- 683
Query: 61 FEKTIRNAEKVFDEMRVRGI--EPDVTSFSIVL 91
K A ++F++MR + EPDV +F I L
Sbjct: 684 --KKFTEARRLFEKMRKERLTAEPDVYNFYIDL 714
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 137/292 (46%), Gaps = 21/292 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PNV Y L+ CK NR+D A + L EM +G +P+ V+Y L++ +C+
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238
Query: 54 --SLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
S P+ E T A ++ DEM +GI+P+V S++ +++ S A +
Sbjct: 239 AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVE 298
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
LSL L M +G P + T+TS++K G +A + M+R GV P+ YN
Sbjct: 299 LSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALM 358
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
++ A+ ++ QM E + C PN+ TY+ LI + +D E+WN +
Sbjct: 359 HGLCSKRSLGDAVSVFNQM-EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGC 417
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ +YT ++ LC + +A M + P VTF T +GL S
Sbjct: 418 HPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGS 469
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 11/261 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ +TSLI G+ A F MI GV PNVV YN L++G+C + SL
Sbjct: 314 PNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL------ 367
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A VF++M + G P+V ++S ++ Y++A + + N+M G P V
Sbjct: 368 ----GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVA 423
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +V LC A L+ M P+ T+N F K G + A+K++ QM
Sbjct: 424 YTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMG 483
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN TYN L+ + R + ++ + L+L +Y +I+G C
Sbjct: 484 NSG-CFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542
Query: 242 KEACQYFVEMIEKGLLPQKVT 262
EA + +M+ +G P +T
Sbjct: 543 GEALELLGKMVVRGTKPDAIT 563
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 135/310 (43%), Gaps = 26/310 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
P+V +Y +LI G CK + A + L EM+ +G++PNV++Y ++N + ++
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303
Query: 57 ----------PN-ERFEKTIRN---------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN F I+ A +D M G+ P+V +++ ++H
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCS 363
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ N M+ G CP V TY++++ G ++ A E+ M+ +G P+
Sbjct: 364 KRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVA 423
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y C N A L M+ ++ C PN T+N I R+D ++++ +
Sbjct: 424 YTCMVDVLCRNSMFNQAYCLIENMQVEN-CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
S + +Y L+ L + +++ EA +M +G+ VT+ T+ G + ML
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542
Query: 277 RTWRRLKKKL 286
L K+
Sbjct: 543 GEALELLGKM 552
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 125/307 (40%), Gaps = 44/307 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +L++G C + A +M G PNV TY+ L++G + L
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD---- 403
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +V++ M G P+V +++ ++ V R + + M+ + P
Sbjct: 404 ------GASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTV 457
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ + +K LC GR++ A ++ +M +G P+ TYN + A L + M
Sbjct: 458 TFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDM 517
Query: 181 KEDDL---------------CV-------------------PNIHTYNILIGMFMALNRM 206
+ + C P+ T NI+I + ++
Sbjct: 518 EHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKV 577
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ ++ + + + D+ +YT LI G+C +EA Y M+ +G+ P T+ L
Sbjct: 578 NIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVL 637
Query: 267 YRGLIQS 273
R L +
Sbjct: 638 VRHLFSN 644
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 6/209 (2%)
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + + + +M++ GI F V+ Y RA + +L M++ + PTV
Sbjct: 89 EREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKI 148
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ L R + + M ++G+ P+ TYN K +GA KL +M
Sbjct: 149 YNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMS 208
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P+ +Y LI L ++ RE+ S + Y LI+G+C++ +
Sbjct: 209 SKG-CDPDEVSYTTLISSLCKLGKVKEARELAMSFTPS-----VPVYNALINGVCKEYTF 262
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+EA Q EM+ KG+ P +++ T+ L
Sbjct: 263 EEAFQLLDEMMNKGIDPNVISYTTIINAL 291
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y L+ K R A + +M RG+E N+VTYN ++ G C L
Sbjct: 489 PNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML------ 542
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ +M VRG +PD + +IV+ Y + K +++ ++ + P +
Sbjct: 543 ----GEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIA 598
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
YTS++ +C+ +E+A L M+ G+SP+ T+N + +GA++
Sbjct: 599 YTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQF 653
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 2/194 (1%)
Query: 90 VLHVYSRAHKPQLSLDKL-NFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
VL H L+L+ + K T TY +++ L S ++ + LL +M
Sbjct: 46 VLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLE 105
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G+S S + + YR + A+K + +M +D P + YN ++ + NR M
Sbjct: 106 GISCSEDLFISVIGSYRRAGSSEQALKTFYRM-QDFRVKPTVKIYNHILDALLDENRFQM 164
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+ I++++K + ++ +Y +L+ LC+ + A + VEM KG P +V++ TL
Sbjct: 165 INPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLIS 224
Query: 269 GLIQSDMLRTWRRL 282
L + ++ R L
Sbjct: 225 SLCKLGKVKEAREL 238
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 141/271 (52%), Gaps = 12/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K Y+ L+ GW + + +M+ G +P++VTY ++++ +C+
Sbjct: 205 PDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGR------- 257
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A V +M RG +P +S+++H Y + + ++ M++ GI P V
Sbjct: 258 ---VEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVV 314
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V C + ++A ++ +M +G+SP++ T+N + A +++R M
Sbjct: 315 YNALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMI 374
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P+ TY ++I MF ++++M ++W +++ + + ++++LI+GLC+K +
Sbjct: 375 KR--CKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEV 432
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+AC +MIEKG+ P TF L + L++
Sbjct: 433 SQACVLLEDMIEKGIRPPGSTFGKLRQLLLK 463
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 90/173 (52%), Gaps = 17/173 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +Y +L+ +CK+ + D A R + +M G+ PN T+N++LN + SL ++
Sbjct: 309 VPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLI---SLGKDDE 365
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ RN ++ +PD ++++++ ++ K +++L +M+ K P++
Sbjct: 366 AYRVFRNM--------IKRCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMH 417
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKD 169
T++ ++ LC G + A LL +M+ G+ P T+ KE GRKD
Sbjct: 418 TFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKE--GRKD 468
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 99/225 (44%), Gaps = 3/225 (1%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
MR G+ +V +FSI++ Y+RA K ++ N M+ G+ +A + S++ LC
Sbjct: 130 MRKEGV-ANVETFSIIMRKYARAQKFDEAVYTFNIMERYGVAHNLAAFNSLLGALCKSKN 188
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+ A+E+ +M N SP A+TY+ + + + ++Y M C P+I TY
Sbjct: 189 VRKAQEIFDKM-NNRFSPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAG-CQPDIVTYG 246
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
I++ R++ + + Y++L+H + ++A F++M +
Sbjct: 247 IMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKD 306
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
G++P V + L + R+ ++ I+ S N
Sbjct: 307 GIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWN 351
>gi|224111364|ref|XP_002315827.1| predicted protein [Populus trichocarpa]
gi|222864867|gb|EEF01998.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 135/288 (46%), Gaps = 14/288 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y + +GWC++ + L EMI+ G P+ TY ++ CR
Sbjct: 170 PDANTYNVMFFGWCRVRNPTRGMKVLEEMIQLGHTPDSFTYITAIDAFCRAG-------- 221
Query: 62 EKTIRNAEKVFDEMRVRGI---EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ A ++F+ MR +G P +++I++ R ++ L M G P
Sbjct: 222 --MVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGALVRNNRMDECFKLLEDMINSGCLPD 279
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V+T+ +++ +CS G+I++A L EM G P TYNCF K K++ A++LY
Sbjct: 280 VSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPPDIVTYNCFLKVLCENKNSEEALRLYE 339
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M E C P++ T+N+LI MF + D E W + D+D+Y ++I GL
Sbjct: 340 RMIEAG-CFPSVQTHNMLISMFFEMGDPDGAFETWYEMDKRGCAQDVDTYIVMIDGLFGC 398
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
K ++AC +++ KG+ F++ L +R RL + +
Sbjct: 399 NKVEDACFLIEDIVNKGMKLPYQKFDSFLMQLSVIGNIRAIHRLSEHM 446
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + LI G C +ID A RFL EM +G P++VTYN L +C N+
Sbjct: 277 LPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPPDIVTYNCFLKVLCE------NKN 330
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ +R +++ M G P V + ++++ ++ P + + M ++G V
Sbjct: 331 SEEALR----LYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETWYEMDKRGCAQDVD 386
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163
TY ++ L C ++EDA L+ ++V G+ + ++ F +
Sbjct: 387 TYIVMIDGLFGCNKVEDACFLIEDIVNKGMKLPYQKFDSFLMQ 429
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 42/207 (20%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF-------KEYRGRK- 168
P + + ++ LC C EDAE L + V+N V P A TYN F RG K
Sbjct: 136 PEINAFNLLLDALCKCCLAEDAEGLF-KRVKNKVKPDANTYNVMFFGWCRVRNPTRGMKV 194
Query: 169 --------------------DA-------NGAMKLYRQM--KEDDLCVPNIHTYNILIGM 199
DA N A +L+ M K + P TY I+IG
Sbjct: 195 LEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGA 254
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ NRMD ++ + S D+ ++ LI G+C K EA ++ EM KG P
Sbjct: 255 LVRNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPPD 314
Query: 260 KVTFETLYRGLIQS----DMLRTWRRL 282
VT+ + L ++ + LR + R+
Sbjct: 315 IVTYNCFLKVLCENKNSEEALRLYERM 341
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 136/276 (49%), Gaps = 12/276 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + + LI+G+CK + D A + M P+VVTY + C+
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCK---------- 320
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E R ++ +EMR G P+V +++IV+H ++ + +L MKE G P
Sbjct: 321 EGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKF 380
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ L GR +DA E+ +M GV YN A++L ++M+
Sbjct: 381 YSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRME 440
Query: 182 --EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
E + C PN+ TY L+ M +M ++ + +H+ +++ +D+ +Y +LI GLC
Sbjct: 441 DEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSG 500
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
K +EAC +F E + KG++P+ T + L L + +M
Sbjct: 501 KVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNM 536
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 34 GVEPNVVTYNVLLNGVCRRASL-HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
GV+ + + N L++ + + S+ H +E F K +FD I+PD +F+I++H
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLK-------LFD-----TIKPDARTFNILIH 281
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+ +A K + ++ MK P V TYTS V+ C G E+L EM NG +P
Sbjct: 282 GFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNP 341
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
+ TY K A+ +Y +MKED CVP+ Y+ LI + R EI
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDG-CVPDAKFYSSLIHILSKTGRFKDAAEI 400
Query: 213 WNHVKGSELGLDLDSYTMLIHG 234
+ + + D+ Y +I
Sbjct: 401 FEDMTNQGVRRDVLVYNTMISA 422
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ K Y+SLI+ K R A +M +GV +V+ YN +++ A+LH + R
Sbjct: 375 VPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMIS-----AALH-HSR 428
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E +R +++ DE P+V +++ +L + K +L L+ M + + V+
Sbjct: 429 DEMALRLLKRMEDE-EGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVS 487
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
TY +++ LC G++E+A E VR G+ P T E + A +K+
Sbjct: 488 TYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKI 543
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 3/181 (1%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKL 176
T+ T + V++ L G+ A + EM ++ GV N A ++
Sbjct: 202 TLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEV 261
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+ +K D P+ T+NILI F + D R + + +K +E D+ +YT + C
Sbjct: 262 F--LKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYC 319
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSE 296
++ ++ + EM E G P VT+ + L +S + + +K+ E+ ++
Sbjct: 320 KEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAK 379
Query: 297 F 297
F
Sbjct: 380 F 380
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 145/307 (47%), Gaps = 11/307 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P +Y +LI G+C+ ++ A G+M R ++P+ +TYN L+NG+C+ ER
Sbjct: 235 VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA------ER 288
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I NA+ + EM+ G+ P V +F+ ++ Y R + + L+ M+E G+ P V
Sbjct: 289 ----ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 344
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y S+V C G+I +A +L +M V P+A+ YN Y + A L +M
Sbjct: 345 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 404
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + + P+I TYN+LI +++ EI N + L D SY LI C +
Sbjct: 405 KSNGIS-PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 463
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
+A M + G+ T+ L GL + L L +K+ + ++ + N
Sbjct: 464 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 523
Query: 301 HFKPYRR 307
+ Y +
Sbjct: 524 MVEAYSK 530
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 15/268 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y ++I G K ++ R +M+ G++PN +TYNVLL+G+CR R
Sbjct: 95 LPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG------R 148
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+T + DEM + + PD ++SI+ SR + L + G+ T+
Sbjct: 149 MGET----SALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGV--TIG 202
Query: 121 TYTS--VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
YT ++ LC G++ AEE+L +V G+ P+ YN Y + GA +
Sbjct: 203 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 262
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
QMK + P+ TYN LI R+ +++ ++ + + ++++ LI
Sbjct: 263 QMKSRHI-KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 321
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ EM E GL P V++ ++
Sbjct: 322 GQLEKCFIVLSEMQENGLKPNVVSYGSI 349
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 137/347 (39%), Gaps = 65/347 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-SLHPNER 60
PN Y L+ G C+ R+ L EM + + P+ TY++L +G+ R S
Sbjct: 131 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSL 190
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F K ++N AE+V + G+ P ++ +++ Y +
Sbjct: 191 FGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 250
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + MK + I P TY +++ LC RI +A++LL EM NGV+P+ ET
Sbjct: 251 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 310
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDL------------------------------- 185
+N Y + +M+E+ L
Sbjct: 311 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 370
Query: 186 ---CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+PN YN +I ++ D + +K + + + +Y +LI GLC + +
Sbjct: 371 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 430
Query: 243 EACQYFVEMIEKGLLPQKVTFETL-----YRGLIQSDMLRTWRRLKK 284
EA + + L+P V++ TL YRG I L +R+ K
Sbjct: 431 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK-ALDLQQRMHK 476
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +I G + R A EM ER V PN +TYN +++G + L R
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
D+M G++P+ +++++L RA + + L+ M + + P T
Sbjct: 121 R----------DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFT 170
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ + L G + L G+ ++NGV+ T + + A ++ + +
Sbjct: 171 YSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLV 230
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L VP YN LI + ++ + +K + D +Y LI+GLC+ ++
Sbjct: 231 NAGL-VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 289
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
A +EM + G+ P TF TL
Sbjct: 290 TNAQDLLMEMQDNGVNPTVETFNTL 314
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 128/304 (42%), Gaps = 19/304 (6%)
Query: 12 YGWCKINRIDMAERFLGEMI--------ERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
+ W K + +A LGE + + PN +YNV++ G+ R
Sbjct: 28 FAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGG------- 80
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+A +VFDEM R + P+ +++ ++ + + + + M G+ P TY
Sbjct: 81 ---DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 137
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ LC GR+ + LL EM + P TY+ F D+ + L+ + ++
Sbjct: 138 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKN 197
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
+ + + +T +IL+ ++ + E+ + + L Y LI+G C+ + +
Sbjct: 198 GVTIGD-YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEG 256
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFK 303
A F +M + + P +T+ L GL +++ + + L ++ + + E N
Sbjct: 257 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 316
Query: 304 PYRR 307
Y R
Sbjct: 317 AYGR 320
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 75/202 (37%), Gaps = 35/202 (17%)
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
L S GR D G + G P +N + D A+ + R+M D
Sbjct: 1 ALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPP 60
Query: 188 PNIHTYNILI-GMFMALNRMDMVR-------------------EIWNHVKGSEL------ 221
PN +YN++I GM+ A D V I H+KG +L
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120
Query: 222 -------GLDLDS--YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
GL ++ Y +L+ GLC + E EM + ++P T+ L+ GL +
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180
Query: 273 SDMLRTWRRLKKKLDEESITFG 294
+ + L K + +T G
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIG 202
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 157/315 (49%), Gaps = 34/315 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PNV +YT+LI G CK I+ A+ EM + G+ N TY VL++G+ +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEM 255
Query: 54 -------SLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ PN + N A KVFDEMR RG+ ++ +++ ++ R
Sbjct: 256 YEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + + ++ MK GI P + TY +++ C ++ A L ++ G+SPS T
Sbjct: 316 EMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVT 375
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + D +GA K+ ++M+E + P+ TY ILI F + M+ ++ + +
Sbjct: 376 YNILVSGFCKKGDTSGAGKVVKEMEERGI-KPSKVTYTILIDTFARSDNMEKAIQLRSSM 434
Query: 217 KGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ ELGL D+ +Y++LIHG C K + EA + F M+EK P +V + T+ G +
Sbjct: 435 E--ELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEG 492
Query: 275 ----MLRTWRRLKKK 285
LR +R +++K
Sbjct: 493 SSYRALRLFREMEEK 507
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 139/290 (47%), Gaps = 11/290 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V + +I G C+ I+ + L E+ E G PNVV Y L++G C++
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGE-------- 213
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I A+ +F EM G+ + ++++++H + + + M+E G+ P + TY
Sbjct: 214 --IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTY 271
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
V+ LC GR +DA ++ EM GVS + TYN AN A ++ QMK
Sbjct: 272 NCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKS 331
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D + PN+ TYN LI F + ++ + +K L L +Y +L+ G C+K
Sbjct: 332 DGIN-PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + EM E+G+ P KVT+ L +SD + +L+ ++E +T
Sbjct: 391 GAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLT 440
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 136/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y ++ CK R A + EM ERGV N+VTYN L+ G+CR + NE
Sbjct: 266 PNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCRE--MKANE-- 321
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +V D+M+ GI P++ +++ ++ + K +L +K +G+ P++ T
Sbjct: 322 ------ANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVT 375
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V C G A +++ EM G+ PS TY + + A++L M+
Sbjct: 376 YNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSME 435
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L P++HTY++LI F RM+ ++ + + + Y ++ G C++
Sbjct: 436 ELGL-TPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSS 494
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + F EM EK L P ++ + L + + L +K+ + I
Sbjct: 495 YRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGI 544
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 68/243 (27%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PN+ Y +LI G+C + ++ A ++ RG+ P++VTYN+L++G C++
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395
Query: 58 -NERFEKTIR-----------------NAEKVF---DEMRVRGIEPDVTSFSIVLHVY-- 94
E E+ I+ N EK M G+ PDV ++S+++H +
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455
Query: 95 -------SRAHKPQL--------------------------SLDKLNFMKEKGICPTVAT 121
SR K + +L M+EK + P VA+
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC + ++AE L+ +M+ +G+ PS N R + D++ R M
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI---SRAKNDSHS-----RSMD 567
Query: 182 EDD 184
E++
Sbjct: 568 EEE 570
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 145/307 (47%), Gaps = 11/307 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P +Y +LI G+C+ ++ A G+M R ++P+ +TYN L+NG+C+ ER
Sbjct: 372 VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA------ER 425
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I NA+ + EM+ G+ P V +F+ ++ Y R + + L+ M+E G+ P V
Sbjct: 426 ----ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 481
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y S+V C G+I +A +L +M V P+A+ YN Y + A L +M
Sbjct: 482 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 541
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + + P+I TYN+LI +++ EI N + L D SY LI C +
Sbjct: 542 KSNGIS-PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 600
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
+A M + G+ T+ L GL + L L +K+ + ++ + N
Sbjct: 601 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 660
Query: 301 HFKPYRR 307
+ Y +
Sbjct: 661 MVEAYSK 667
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 15/268 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y ++I G K ++ R +M+ G++PN +TYNVLL+G+CR R
Sbjct: 232 LPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAG------R 285
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+T + DEM + + PD ++SI+ SR + L + G+ T+
Sbjct: 286 MGET----SALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGV--TIG 339
Query: 121 TYTS--VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
YT ++ LC G++ AEE+L +V G+ P+ YN Y + GA +
Sbjct: 340 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 399
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
QMK + P+ TYN LI R+ +++ ++ + + ++++ LI
Sbjct: 400 QMKSRHI-KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 458
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ EM E GL P V++ ++
Sbjct: 459 GQLEKCFIVLSEMQENGLKPNVVSYGSI 486
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 137/347 (39%), Gaps = 65/347 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-SLHPNER 60
PN Y L+ G C+ R+ L EM + + P+ TY++L +G+ R S
Sbjct: 268 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSL 327
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F K ++N AE+V + G+ P ++ +++ Y +
Sbjct: 328 FGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 387
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + MK + I P TY +++ LC RI +A++LL EM NGV+P+ ET
Sbjct: 388 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 447
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDL------------------------------- 185
+N Y + +M+E+ L
Sbjct: 448 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 507
Query: 186 ---CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+PN YN +I ++ D + +K + + + +Y +LI GLC + +
Sbjct: 508 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 567
Query: 243 EACQYFVEMIEKGLLPQKVTFETL-----YRGLIQSDMLRTWRRLKK 284
EA + + L+P V++ TL YRG I L +R+ K
Sbjct: 568 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK-ALDLQQRMHK 613
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +I G + R A EM ER V PN +TYN +++G + L R
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
D+M G++P+ +++++L RA + + L+ M + + P T
Sbjct: 258 R----------DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFT 307
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ + L G + L G+ ++NGV+ T + + A ++ + +
Sbjct: 308 YSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLV 367
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L VP YN LI + ++ + +K + D +Y LI+GLC+ ++
Sbjct: 368 NAGL-VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 426
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
A +EM + G+ P TF TL
Sbjct: 427 TNAQDLLMEMQDNGVNPTVETFNTL 451
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 128/304 (42%), Gaps = 19/304 (6%)
Query: 12 YGWCKINRIDMAERFLGEMI--------ERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
+ W K + +A LGE + + PN +YNV++ G+ R
Sbjct: 165 FAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGR--------- 215
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+A +VFDEM R + P+ +++ ++ + + + + M G+ P TY
Sbjct: 216 -GGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 274
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ LC GR+ + LL EM + P TY+ F D+ + L+ + ++
Sbjct: 275 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKN 334
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
+ + + +T +IL+ ++ + E+ + + L Y LI+G C+ + +
Sbjct: 335 GVTIGD-YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEG 393
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFK 303
A F +M + + P +T+ L GL +++ + + L ++ + + E N
Sbjct: 394 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 453
Query: 304 PYRR 307
Y R
Sbjct: 454 AYGR 457
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 83/213 (38%), Gaps = 35/213 (16%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P++++ +++ L S GR D G + G P +N + D A+ +
Sbjct: 127 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 186
Query: 177 YRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVR-------------------EIWNHV 216
R+M D PN +YN++I GM+ A D V I H+
Sbjct: 187 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 246
Query: 217 KGSEL-------------GLDLDS--YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
KG +L GL ++ Y +L+ GLC + E EM + ++P
Sbjct: 247 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 306
Query: 262 TFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
T+ L+ GL ++ + L K + +T G
Sbjct: 307 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG 339
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 154/321 (47%), Gaps = 27/321 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PNV + SLIYG+C + ++ A L EM V PNV T+N+L++G+C+
Sbjct: 227 PNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSV 286
Query: 52 -----RASLHPNER----------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ + PN K + A+ VF+ + +RG+ P+V S+S++++ +
Sbjct: 287 LSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCK 346
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ M K + P TY+S++ LC GRI D +L+ E+ G + T
Sbjct: 347 NKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIIT 406
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + A+ L +MK++ + P++ TY L+ R+ + I+ +
Sbjct: 407 YNSLLNGLCKNHQVDKAIALLTKMKDEGI-QPDMSTYTTLVDGLCKNGRLKDAQRIYQDL 465
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
L++ YT++I+GLC++ + EA +M + G +P VT+ETL L +++
Sbjct: 466 LCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKN 525
Query: 277 -RTWRRLKKKLDEESITFGSE 296
+ + L++ + ES G E
Sbjct: 526 GKAVKLLREMIARESDCSGKE 546
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 141/316 (44%), Gaps = 27/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----RASLHP 57
P+ +L+ G C ++ A F +I + + V+Y L+NG+C+ RA+L
Sbjct: 121 PDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQL 180
Query: 58 NERFE----------------------KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ E K + +A ++ EM V+ I P+V +F+ +++ +
Sbjct: 181 LRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFC 240
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + ++ LN M + P V T+ ++ LC G ++ A +L M++ GV P+
Sbjct: 241 IVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVV 300
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY Y K+ N A ++ + + PN+H+Y+++I +D +++
Sbjct: 301 TYTSLMDGYFLVKEVNKAKHVFNTISLRGV-TPNVHSYSVMINGLCKNKMVDEAVKLFKE 359
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ + + +Y+ LI GLC+ + + E+ +G +T+ +L GL ++
Sbjct: 360 MHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQ 419
Query: 276 LRTWRRLKKKLDEESI 291
+ L K+ +E I
Sbjct: 420 VDKAIALLTKMKDEGI 435
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 141/336 (41%), Gaps = 68/336 (20%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLN---GVCR------- 51
P + + ++ K+N +A F +M +G++P + T+N+L+N +C+
Sbjct: 51 PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110
Query: 52 -----RASLHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ P+ T ++ A D + + D S+ +++ +
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170
Query: 97 AHKPQLSLDKLNFMKEKGIC---PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ + + +L L K +G+ P V YT+++ C + DA +L EM+ + P+
Sbjct: 171 SGETRAALQLLR--KIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPN 228
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI---------------- 197
T+N + A+ L +M +++ PN++T+NILI
Sbjct: 229 VVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVN-PNVYTFNILIDGLCKEGEVKKATSVL 287
Query: 198 --------------------GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
G F+ + ++ + ++N + + ++ SY+++I+GLC+
Sbjct: 288 SVMIKQGVEPNVVTYTSLMDGYFL-VKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCK 346
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ EA + F EM K + P VT+ +L GL +S
Sbjct: 347 NKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKS 382
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 135/268 (50%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+LI+G+ + +M +GEM GVEPN+ TYN L+ CR
Sbjct: 71 PNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEF------ 124
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A +FDEM ++G+ +V S++I++ R K + + M+ +GI P++ T
Sbjct: 125 ----KSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVT 180
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ G++ +A +M G+ PS TYN + +D A++ + MK
Sbjct: 181 FNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMK 240
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L P TY ILIG F N MD E+ + ++ + L +D+ SY +L+H LC + K
Sbjct: 241 ERRL-APTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKM 299
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
A + F M KG+ P V ++ + G
Sbjct: 300 MHARKLFQSMDSKGVKPNNVLYDMMIYG 327
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P YT LI + K N +D A L EM + G+E +V +Y VLL+ +C
Sbjct: 246 PTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALC----------M 295
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +A K+F M +G++P+ + ++++ Y R +L + M++ G+ P VA+
Sbjct: 296 EGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVAS 355
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
Y ++ LC+ G+ ++AE L+G+M G+ S F
Sbjct: 356 YCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVLF 395
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 150/304 (49%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI CK ++ A L M GV N+++YN ++NG+C + +
Sbjct: 240 PNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRM------ 293
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ +EMR +G+ PD +++ +++ + + L L+ M KG+ P V T
Sbjct: 294 ----SEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVT 349
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C+C G + A E+ +M G+ P+ TY + + N A K+ +M
Sbjct: 350 YTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI 409
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P++ TYN L+ + L R+ I + L D+ SY+ +I G C +++
Sbjct: 410 VSGFS-PSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCREREL 468
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL-IQSDMLRTW----RRLKKKLDEESITFGSE 296
+A Q EM+EKG+LP VT+ +L +GL +Q ++ + +++ L + +T+ S
Sbjct: 469 GKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSL 528
Query: 297 FQNY 300
Y
Sbjct: 529 INAY 532
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 146/292 (50%), Gaps = 12/292 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +L+ G+CK + L EM+ +G+ PNVVTY L+N +C+ +L
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNL----- 363
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++FD+MRVRG+ P+ +++ ++ + + + L+ M G P+V
Sbjct: 364 -----SRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVV 418
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V C GR+++A +L MV G+ P +Y+ + ++ A ++ +M
Sbjct: 419 TYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEM 478
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + +P+ TY+ LI ++ +++ + L D +YT LI+ C +
Sbjct: 479 VEKGV-LPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGE 537
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL-DEESI 291
+A + EM+++G LP VT+ L GL + + +RL KL EES+
Sbjct: 538 LSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESV 589
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 115/249 (46%), Gaps = 11/249 (4%)
Query: 21 DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80
D AER +M+ GV PNV TYNV++ GV + L F +R EK GI
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGF---MRKMEK-------EGI 238
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
P+V +++ ++ + K + ++ L M G+ + +Y SV+ LC GR+ + E
Sbjct: 239 SPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGE 298
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
L+ EM G+ P TYN + + + + L +M L PN+ TY LI
Sbjct: 299 LVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLS-PNVVTYTTLINCM 357
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+ EI++ ++ L + +YT LI G C+K EA + EMI G P
Sbjct: 358 CKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSV 417
Query: 261 VTFETLYRG 269
VT+ L G
Sbjct: 418 VTYNALVHG 426
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 26/283 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + YT+LI G+C+ ++ A + L EMI G P+VVTYN L++G C F
Sbjct: 380 PNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC----------F 429
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A + M RG+ PDV S+S V+ + R + + M EKG+ P T
Sbjct: 430 LGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVT 489
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S+++ LC ++ +A +L EM+R G+ P TY Y + + A++L+ +M
Sbjct: 490 YSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMV 549
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH-------- 233
+ N+ TY++LI R + + + + E D +Y LI
Sbjct: 550 QRGFLPDNV-TYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFK 608
Query: 234 -------GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
G C K EA + F M+++ P + + G
Sbjct: 609 SVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHG 651
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 125/247 (50%), Gaps = 14/247 (5%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G P V++YN +L+ + RR+S + + +AE+VF +M G+ P+V ++++++
Sbjct: 162 GFAPTVLSYNAVLDALLRRSSSN-----HRDYDDAERVFRDMVRNGVSPNVYTYNVII-- 214
Query: 94 YSRAHKPQLSLDK-LNFMKE---KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
R Q L+K L FM++ +GI P V TY +++ C ++++A LL M G
Sbjct: 215 --RGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGG 272
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
V+ + +YN G+ + +L +M+ L VP+ TYN L+ F +
Sbjct: 273 VAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL-VPDEVTYNTLVNGFCKEGNLHQG 331
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + + G L ++ +YT LI+ +C+ A + F +M +GL P + T+ TL G
Sbjct: 332 LVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDG 391
Query: 270 LIQSDML 276
Q ++
Sbjct: 392 FCQKGLM 398
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 126/301 (41%), Gaps = 49/301 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
P+V Y+++I G+C+ + A + EM+E+GV P+ VTY+ L+ G+C
Sbjct: 450 PDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDL 509
Query: 51 ----RRASLHPNERFEKTIRNAE----------KVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R L P+E ++ NA ++ DEM RG PD ++S++++ ++
Sbjct: 510 FREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNK 569
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSV---------------VKCLCSCGRIEDAEEL 141
+ +++ L + + P TY ++ VK C G + +A+ +
Sbjct: 570 KARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRV 629
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
M++ P+A YN + + + A LY +++ HT + I +
Sbjct: 630 FKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFAC---HTVAV-IALVK 685
Query: 202 ALNRMDM----VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
AL R M R + N ++ L D +L+ ++ EM + GLL
Sbjct: 686 ALAREGMNDELSRLLQNILRSCRLN-DAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLL 744
Query: 258 P 258
P
Sbjct: 745 P 745
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 108/270 (40%), Gaps = 56/270 (20%)
Query: 41 TYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP 100
+N C+ +LH RF K R A + ++ PD T S+ H++ H
Sbjct: 69 AHNFFFTPHCKCLALHILVRF-KLYRTAHSLAADLA--ATLPDPTGASLFRHLHDTFHLC 125
Query: 101 QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
+ A + VVK L G + A LL R+G +P+ +YN
Sbjct: 126 SSPFS------------SSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAV 173
Query: 161 F-----KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-----------GM-FM-- 201
+ +D + A +++R M + + PN++TYN++I G+ FM
Sbjct: 174 LDALLRRSSSNHRDYDDAERVFRDMVRNGVS-PNVYTYNVIIRGVVSQGDLEKGLGFMRK 232
Query: 202 ------------------ALNRMDMVREIWNHVKGSELG---LDLDSYTMLIHGLCEKQK 240
A + V+E ++ +G +L SY +I+GLC K +
Sbjct: 233 MEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGR 292
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
E + EM KGL+P +VT+ TL G
Sbjct: 293 MSEVGELVEEMRGKGLVPDEVTYNTLVNGF 322
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 146/294 (49%), Gaps = 28/294 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV------------ 49
PNV +YT+LI G CK + +A+ +M G+ PN TY+VL+NG
Sbjct: 191 PNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250
Query: 50 ---CRRASLHPNERFEK----------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+R+ + PN + A KVF EMR +GI V +++I++ R
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K ++ ++ + + G+ P + TY ++ C G+++ A L ++ +G+SP+ T
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT 370
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNH 215
YN Y ++ GA+ L ++M+E C+ P+ TY ILI F LN + E+ +
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEER--CIAPSKVTYTILIDAFARLNYTEKACEMHSL 428
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ S L D+ +Y++LIHGLC KEA + F + E L P V + T+ G
Sbjct: 429 MEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHG 482
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 126/263 (47%), Gaps = 11/263 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y LI +C +D A + EM E+G+ V+TYN+L+ G+CR ++
Sbjct: 260 VPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR------GKK 313
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F + ++ KV G+ P++ +++I+++ + K ++ N +K G+ PT+
Sbjct: 314 FGEAVKLVHKV----NKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLV 369
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ + A +L+ EM ++PS TY + A +++ M
Sbjct: 370 TYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLM 429
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L VP+++TY++LI M +++ + L + Y +IHG C++
Sbjct: 430 EKSGL-VPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGS 488
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
A + EM+ G++P +F
Sbjct: 489 SYRALRLLNEMVHSGMVPNVASF 511
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 46/267 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y LI G+C + ++D A R ++ G+ P +VTYN L+ G + +L
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENL------ 384
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + EM R I P +++I++ ++R + + + + + M++ G+ P V T
Sbjct: 385 ----AGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYT 440
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ LC G +++A +L + + P++ YN Y + A++L +M
Sbjct: 441 YSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMV 500
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ VPN+ ++ IG+ LC +KW
Sbjct: 501 HSGM-VPNVASFCSTIGL-----------------------------------LCRDEKW 524
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYR 268
KEA +MI GL P ++ +++
Sbjct: 525 KEAELLLGQMINSGLKPSVSLYKMVHK 551
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 134/291 (46%), Gaps = 20/291 (6%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y +++ + + D A FL MI G P T+N L+ + R + F+K
Sbjct: 91 LYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIR------SNYFDK-- 142
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
A +F+E++ + + D SF I++ A L ++E G+ P V YT++
Sbjct: 143 --AWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTL 199
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKDANGAMKLYRQMK 181
+ C G + A+ L +M R G+ P+ TY N FFK+ R+ ++Y MK
Sbjct: 200 IDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQRE----GFQMYENMK 255
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ VPN + YN LI + +D +++ ++ + + +Y +LI GLC +K+
Sbjct: 256 RSGI-VPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKF 314
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EA + ++ + GL P VT+ L G + T RL +L ++
Sbjct: 315 GEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365
>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 142/278 (51%), Gaps = 11/278 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ LI+G+C+ +D A + + EM + G P+ +Y + C+ +K R
Sbjct: 206 FNILIHGYCEARMLDDARKTMEEMEKHGFRPDASSYTCFIKAYCK----------QKDFR 255
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
N E + +EM +G EPDV ++SI + +A K +L+ M + P +++++
Sbjct: 256 NVEVILNEMGEKGCEPDVIAYSIYIRALGKARKINEALEVYEKMNKNSCKPDAKFFSTLI 315
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
L GR+ DA + +M +GVS TYN + N A+KL +M E + C
Sbjct: 316 YVLGRSGRLNDAWYVFEDMENHGVSRDLWTYNAMIYHACANRQGNSALKLLERM-EVNSC 374
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++ TY L+ M + M +++ + +H+ + + +DL +Y +LI L E K + AC
Sbjct: 375 KPDLETYQPLLKMCCKMKDMKVLKFLLSHMFNNNVRIDLSTYALLIRELAESGKLEHACF 434
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
+F + + G++P+ T+E L + L Q++M+ +++K
Sbjct: 435 FFQDAVLNGIVPKDRTYEILLKELGQNNMVEMKGKIEK 472
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 102/234 (43%), Gaps = 12/234 (5%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V+ + V N++++ + ++ ++A VF E + I D SF+I++H Y
Sbjct: 165 VKKDTVALNMVMHALAKQGG----------AKDAYSVFLEFK-DSITLDSHSFNILIHGY 213
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
A + + M++ G P ++YT +K C + E +L EM G P
Sbjct: 214 CEARMLDDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDFRNVEVILNEMGEKGCEPDV 273
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
Y+ + + + N A+++Y +M ++ C P+ ++ LI + R++ ++
Sbjct: 274 IAYSIYIRALGKARKINEALEVYEKMNKNS-CKPDAKFFSTLIYVLGRSGRLNDAWYVFE 332
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++ + DL +Y +I+ C ++ A + M P T++ L +
Sbjct: 333 DMENHGVSRDLWTYNAMIYHACANRQGNSALKLLERMEVNSCKPDLETYQPLLK 386
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 88/211 (41%), Gaps = 2/211 (0%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
+ +V+ + + K + +N M E + +T + VV+ L S G +D ++L +
Sbjct: 102 YDLVVDILGKCKKFGIMWKVVNEMNELNGQVSFSTMSIVVRRLASSGMYKDVIDVLRGLE 161
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+ V N + A A ++ + K D + H++NILI + +
Sbjct: 162 KYRVKKDTVALNMVMHALAKQGGAKDAYSVFLEFK--DSITLDSHSFNILIHGYCEARML 219
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D R+ ++ D SYT I C+++ ++ EM EKG P + +
Sbjct: 220 DDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDFRNVEVILNEMGEKGCEPDVIAYSIY 279
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
R L ++ + + +K+++ S ++F
Sbjct: 280 IRALGKARKINEALEVYEKMNKNSCKPDAKF 310
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 151/302 (50%), Gaps = 22/302 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ C ++ A L M++R P+V+TY +L+ CR
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR---------- 251
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + +A K+ DEMR RG PDV +++++++ + + ++ LN M G P V T
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG-AMKLYRQM 180
+ +++ +CS GR DAE+LL +M+R G SPS T+N + RK G A+ + +M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN-FLCRKGLLGRAIDILEKM 370
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C PN +YN L+ F +MD E + D+ +Y ++ LC+ K
Sbjct: 371 PQHG-CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK-------KKLDEESITF 293
++A + ++ KG P +T+ T+ GL ++ +T + +K K L ++IT+
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG--KTGKAIKLLDEMRAKDLKPDTITY 487
Query: 294 GS 295
S
Sbjct: 488 SS 489
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 139/285 (48%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + ++ C R AE+ L +M+ +G P+VVT+N+L+N +CR+ L
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG----- 361
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M G +P+ S++ +LH + + K +++ L M +G P + T
Sbjct: 362 -----RAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G++EDA E+L ++ G SP TYN A+KL +M+
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
DL P+ TY+ L+G ++D + ++ + + + ++ ++ GLC+ ++
Sbjct: 477 AKDL-KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A + V MI +G P + ++ L GL M + L +L
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 26/297 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+V YT LI C+ + + A + L EM +RG P+VVTYNVL+NG+C+ L
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 56 ---------HPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN I +AEK+ +M +G P V +F+I+++ R
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++D L M + G P +Y ++ C +++ A E L MV G P T
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN A+++ Q+ C P + TYN +I + ++ + +
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKG-CSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ +L D +Y+ L+ GL + K EA ++F E G+ P VTF ++ GL +S
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKS 532
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 121/252 (48%), Gaps = 14/252 (5%)
Query: 25 RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84
+FL M+ G P+++ L+ G C R KT R A K+ + + G PDV
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFC---------RLGKT-RKAAKILEILEGSGAVPDV 172
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++++++ Y +A + +L L+ M + P V TY ++++ LC G+++ A E+L
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
M++ P TY + AMKL +M+ D C P++ TYN+L+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR-DRGCTPDVVTYNVLVNGICKEG 288
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
R+D + N + S ++ ++ +++ +C +W +A + +M+ KG P VTF
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 265 TLYRGLIQSDML 276
L L + +L
Sbjct: 349 ILINFLCRKGLL 360
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 140/307 (45%), Gaps = 53/307 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ T+LI G+C++ + A + L + G P+V+TYNV+++G C+
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE------ 187
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I NA V D M V PDV +++ +L + K + +++ L+ M ++ P V
Sbjct: 188 ----INNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYR 178
TYT +++ C + A +LL EM G +P TYN GR D A+K
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE--AIKFLN 298
Query: 179 QMKEDDLCVPNIHTYNILI------GMFMALNRM--DMVREIWNH------------VKG 218
M C PN+ T+NI++ G +M ++ DM+R+ ++ +
Sbjct: 299 DMPSSG-CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 219 SELGLDLD---------------SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
LG +D SY L+HG C+++K A +Y M+ +G P VT+
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 264 ETLYRGL 270
T+ L
Sbjct: 418 NTMLTAL 424
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 140/287 (48%), Gaps = 11/287 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++K YT L+ GW + M + EM++ G++P+VV Y +L++ C+
Sbjct: 256 IPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCD---- 311
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVF EM G P + ++++ + +L KE G V
Sbjct: 312 ------EAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVP 365
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +V+ C A +++ EM ++G+ P+ TY+ + A L+++M
Sbjct: 366 TCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRM 425
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E D C P ++TY +++GMF + R+DM ++W +K + + ++ LI+GLC +
Sbjct: 426 -ERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFDNR 484
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+EAC YF EM++KG+ P F L L++ + + + ++L+
Sbjct: 485 LEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQRLE 531
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 110/229 (48%), Gaps = 2/229 (0%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG-ICPTVAT 121
+ ++ A + F++M G++ D++ ++ ++ + S++ + + + MK KG P + T
Sbjct: 202 RKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKT 261
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ + + + EM+ G+ P Y + + A+K++ +M+
Sbjct: 262 YTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEME 321
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C+P+ H Y +LI ++ R+D + + K S +++ + +I C ++
Sbjct: 322 ESG-CMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEF 380
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
A + EM + G+ P T++ + LI+S+ + L ++++ +
Sbjct: 381 HHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDG 429
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%)
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
C + T+ +V+ ++++A E +M G+ YN K A
Sbjct: 185 CLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHA 244
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
++++MK +P++ TY +L+ + + M++ ++ + + + D+ +Y MLI
Sbjct: 245 IFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAF 304
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
C+ K EA + F EM E G +P + L GL
Sbjct: 305 CKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGL 339
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 144/287 (50%), Gaps = 12/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I G+C + + + EM +G++PN+ TYN ++ +C+
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK------- 60
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +AE+V EM +GI PD ++ ++ + + Q + + M+++ I P
Sbjct: 61 ---VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIA 117
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+V+ LC CG++ +A+++ +M GV P TY Y + A L+ QM
Sbjct: 118 YTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMV 177
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L PN+ TY L L ++D E+ + + G L L++ +Y L++GLC+
Sbjct: 178 QSGL-TPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNI 236
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRLKKKLD 287
++A + EM G+ P +TF TL ++ +M++ L++ LD
Sbjct: 237 RQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLD 283
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 141/259 (54%), Gaps = 19/259 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+L G CK+ ++D A L EM +G++ N+ TYN L+NG+C+ +
Sbjct: 183 PNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGN------- 235
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
IR A K+ +EM V G+ PD +F+ ++ Y + + + + L M ++G+ PTV T
Sbjct: 236 ---IRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVIT 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C G +ED E LL M+ G+ P+ TYN K+Y R + ++Y+ M
Sbjct: 293 FNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMC 352
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWN-HVKGSELGLDL--DSYTMLIHGLCE 237
+ +P+ +TYNILI G A N ++E W H + +E G +L SY +I G +
Sbjct: 353 ARGV-MPDSNTYNILIKGHCKARN----MKEAWFLHKEMAEKGFNLTASSYNSIIKGFFK 407
Query: 238 KQKWKEACQYFVEMIEKGL 256
K+K EA + F EM +G+
Sbjct: 408 KKKISEARELFEEMRREGM 426
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 139/292 (47%), Gaps = 26/292 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN--- 58
PN+ Y S+I CK ++D AER L EMI +G+ P+ V Y L++G C+ ++
Sbjct: 43 PNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKL 102
Query: 59 -ERFEKT---------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ EK + A+KVF++M RG+EPD +++ ++ Y +
Sbjct: 103 FDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCK 162
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + + N M + G+ P V TYT++ LC G+++ A ELL EM G+ + T
Sbjct: 163 SGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICT 222
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + A+KL +M+ + P+ T+ L+ + M E+ +
Sbjct: 223 YNSLVNGLCKSGNIRQAVKLMEEMEVAGM-YPDTITFTTLMDAYCKTGEMVKAHELLREM 281
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
L + ++ +L++G C ++ + M+EKG++P T+ +L +
Sbjct: 282 LDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMK 333
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 150/324 (46%), Gaps = 26/324 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA------S 54
+P+ YT++I G C+ ++ A++ +M RGVEP+ VTY L++G C+ S
Sbjct: 112 VPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFS 171
Query: 55 LH---------PNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
LH PN + + A ++ EM +G++ ++ +++ +++
Sbjct: 172 LHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLC 231
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
++ + ++ + M+ G+ P T+T+++ C G + A ELL EM+ G+ P+
Sbjct: 232 KSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVI 291
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
T+N + +L M E + +PN TYN L+ + N M EI+
Sbjct: 292 TFNVLMNGFCMSGMLEDGERLLAWMLEKGI-MPNTTTYNSLMKQYCIRNNMRCTTEIYKG 350
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ + D ++Y +LI G C+ + KEA EM EKG ++ ++ +G +
Sbjct: 351 MCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKK 410
Query: 276 LRTWRRLKKKLDEESITFGSEFQN 299
+ R L +++ E + +E N
Sbjct: 411 ISEARELFEEMRREGMAADAEIYN 434
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
M+ RG PDV S+S V++ Y + Q L + M+ KG+ P + TY S++ LC G+
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
++DAE +L EM+ G+ P Y + + A KL+ +M++ + VP+ Y
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRI-VPDFIAYT 119
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
+I +M +++N + + D +YT LI G C+ + ++A +M++
Sbjct: 120 AVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQS 179
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRL 282
GL P VT+ L GL + + T L
Sbjct: 180 GLTPNVVTYTALADGLCKLGQVDTANEL 207
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 29/209 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+L+ +CK + A L EM++RG++P V+T+NVL+NG C L ER
Sbjct: 253 PDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERL 312
Query: 62 -----EKTI--------------------RNAEKVFDEMRVRGIEPDVTSFSIVL--HVY 94
EK I R +++ M RG+ PD +++I++ H
Sbjct: 313 LAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCK 372
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+R K L K M EKG T ++Y S++K +I +A EL EM R G++ A
Sbjct: 373 ARNMKEAWFLHK--EMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADA 430
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKED 183
E YN F G + A++L + E+
Sbjct: 431 EIYNLFVDISYGEGNMETALELCDEAIEN 459
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 149/286 (52%), Gaps = 12/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K Y+ L+ GW K + A EMI+ G P++VTY+++++ +C+
Sbjct: 199 PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGR------- 251
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + M +P +S+++H Y ++ + ++D M+ G+ VA
Sbjct: 252 ---VDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 308
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++ C R+++ +L EM GV+P++++ N + R + + A ++R+M
Sbjct: 309 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI 368
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +C P+ TY ++I MF M+ ++W +++ + + ++++LI+GLCE++
Sbjct: 369 K--VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTT 426
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
++AC EMIE G+ P VTF L + LI+ + + L +K++
Sbjct: 427 QKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMN 472
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 105/217 (48%), Gaps = 2/217 (0%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
+V +F IV+ Y+RA K ++ N M++ + P + + ++ LC + A+E+
Sbjct: 131 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 190
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
M R+ +P ++TY+ + + + A +++R+M D C P+I TY+I++ +
Sbjct: 191 ENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI-DAGCHPDIVTYSIMVDILCK 248
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
R+D I + S Y++L+H + + +EA F+EM G+
Sbjct: 249 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 308
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
F +L +++ ++ R+ K++ + +T S+ N
Sbjct: 309 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCN 345
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 141/273 (51%), Gaps = 14/273 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ +V Y ++ C++ +++ A +MI +G+ P++V+YN ++ G C++ +
Sbjct: 428 IASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMD---- 483
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A +V + + G++P+ +++I++ + + + + + M GI PT
Sbjct: 484 ------DAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDY 537
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ S++ LC GR+ +A + L ++ P++ TYNC Y + A +YR+M
Sbjct: 538 TFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREM 597
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ PN+ TY LI F N+MD+ ++ + +K L LD+ Y LI G C+ Q
Sbjct: 598 CRSEIS-PNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQD 656
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL---YRGL 270
+ AC++F +++E GL P + + + YR L
Sbjct: 657 MENACKFFSKLLEVGLTPNTIVYNIMISAYRNL 689
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 142/325 (43%), Gaps = 44/325 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +I G CK +D A + +IE G++PN +TY +L+ G ++
Sbjct: 464 PSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGD------- 516
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A +FD+M GI P +F+ +++ + + + DKLN ++ PT T
Sbjct: 517 ---CEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMT 573
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ G I+ AE + EM R+ +SP+ TY + + A+K++ MK
Sbjct: 574 YNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMK 633
Query: 182 ----EDDLCV------------------------------PNIHTYNILIGMFMALNRMD 207
E D+ V PN YNI+I + LN M+
Sbjct: 634 RKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNME 693
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ + +++ DL YT LI GL ++ K A + EM+ +G++P + L
Sbjct: 694 AALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLI 753
Query: 268 RGLIQSDMLRTWRRLKKKLDEESIT 292
GL L ++ K++D +IT
Sbjct: 754 NGLCNHGQLENAGKILKEMDGNNIT 778
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 137/303 (45%), Gaps = 44/303 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + S+I G CK+ R+ A L I++ P +TYN +++G +
Sbjct: 533 VPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVK--------- 583
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I +AE V+ EM I P+V +++ +++ + +++K L+L + MK KG+ +
Sbjct: 584 -EGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDIT 642
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C +E+A + +++ G++P+ YN YR + A+ L+++M
Sbjct: 643 VYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEM 702
Query: 181 --------------------KEDDLC--------------VPNIHTYNILIGMFMALNRM 206
KE L VP+I YN+LI ++
Sbjct: 703 INNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQL 762
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ +I + G+ + + Y LI G ++ +EA + EM++KGL+P T++ L
Sbjct: 763 ENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDIL 822
Query: 267 YRG 269
G
Sbjct: 823 VNG 825
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 147/363 (40%), Gaps = 60/363 (16%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLN-----GVCRRAS--- 54
NV + TSLI G+C ++ A R E++E GV PNV ++VL+ G +A+
Sbjct: 326 NVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELY 385
Query: 55 -------LHPNE----------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
L P R + + NA + D GI V +++IVL
Sbjct: 386 TRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCEL 444
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
K + + + M KGI P++ +Y ++ C G ++DA E++ ++ +G+ P+A TY
Sbjct: 445 GKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITY 504
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKE--------------DDLC----------------- 186
+ + D A ++ QM + LC
Sbjct: 505 TILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIK 564
Query: 187 ---VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
+P TYN +I ++ +D ++ + SE+ ++ +YT LI+G C+ K
Sbjct: 565 QSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDL 624
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFK 303
A + +M KGL + TL G + + + KL E +T + N
Sbjct: 625 ALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMIS 684
Query: 304 PYR 306
YR
Sbjct: 685 AYR 687
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 134/307 (43%), Gaps = 21/307 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I ++ A R EM++ V NV L+ G C R
Sbjct: 289 VPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGD------ 342
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +A ++FDE+ G+ P+V FS+++ S+ + + + MK G+ PTV
Sbjct: 343 ----VNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVF 398
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++K +E+A LL V NG++ S TYN N A L+ +M
Sbjct: 399 ILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKM 457
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P++ +YN +I MD E+ N + S L + +YT+L+ G +K
Sbjct: 458 IGKGI-TPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGD 516
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-------SDMLRTWRRLKKKLDEESITF 293
+ A F +M+ G++P TF ++ GL + D L T+ +K+ S+T+
Sbjct: 517 CEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTF--IKQSFIPTSMTY 574
Query: 294 GSEFQNY 300
Y
Sbjct: 575 NCIIDGY 581
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 127/303 (41%), Gaps = 45/303 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V L+ + N ++ A R EM ER + + T VL+ RA L +
Sbjct: 184 VPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLM-----RACLKGGKF 238
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E AE+ F + RG++ D S+SIV+ R L+ + +E G P+
Sbjct: 239 VE-----AERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEG 293
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +V+ G +A L EMV + V + K Y R D N A++L+ ++
Sbjct: 294 TYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEV 353
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIW-------------------------NH 215
E + PN+ +++LI + ++ E++ N
Sbjct: 354 VEVGV-TPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNL 412
Query: 216 VKGSELGLD---------LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ + L LD + +Y +++ LCE K EAC + +MI KG+ P V++ +
Sbjct: 413 LENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHM 472
Query: 267 YRG 269
G
Sbjct: 473 ILG 475
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 145/284 (51%), Gaps = 16/284 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI G CK+ R+ A L +MI++G P+++ YN+L+NG+C+ ++
Sbjct: 216 PNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKA------DQV 269
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+++I + GI+PDV ++S V++ R+++ + L ++K +G P V
Sbjct: 270 DESIALLRRAVSG----GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVIL 325
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYRQ 179
Y++++ LC G++++A +L M +G TY+ GR D + L R
Sbjct: 326 YSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVD-EAHLLLARM 384
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
++ P+ TYN LI LN +D E+ ++ S +Y +LIHG+C +
Sbjct: 385 VRMGT--PPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRME 442
Query: 240 KWKEAC-QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ A YF EMI+ G++P +T+ L GL +S L R L
Sbjct: 443 RVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHL 486
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 131/272 (48%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+ LI G CK NR+ A L M RG P+V+TY +L++G+C+
Sbjct: 111 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCK---------- 160
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A +V EM G P++ +++ +LH RA + +L + M +G P V T
Sbjct: 161 ESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVT 220
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GR++DA +L +M+ G +P YN + ++ L R+
Sbjct: 221 YGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAV 280
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P++ TY+ +I NR+D + +VK D+ Y+ LI GLC+ K
Sbjct: 281 SGGI-KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKV 339
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA + M G VT+ TL GL ++
Sbjct: 340 DEAFDLYEVMTGDGCDADVVTYSTLIDGLCKA 371
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 127/273 (46%), Gaps = 13/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI G CK N D A+ M P++VTYN LL+G+ R L ER
Sbjct: 8 PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKL---ER- 63
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F EM R DV SF+I++ RA K + +L+ M ++ P V T
Sbjct: 64 ------AMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVIT 115
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ LC R+ A ELL M G SP TY A ++ R+M
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 175
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D CVPN+ TYN L+ R+ + + ++ +Y LI GLC+ +
Sbjct: 176 -DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRV 234
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
K+AC +MI+KG P + + L GL ++D
Sbjct: 235 KDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 267
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 8/226 (3%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
MR G EP+V +++ ++ + ++P + + MK P++ TY +++ L G+
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+E A L EM+ + S ++N A++ +R+M DD C PN+ TY+
Sbjct: 61 LERAMALFQEML-DRRSHDVISFNILVTGLCRAGKIETALEFFRKM--DDRCSPNVITYS 117
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
+LI NR+ E+ +K D+ +YT+L+ GLC++ K A + EM++
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177
Query: 255 GLLPQKVTFETLYRGLIQ----SDMLRTWRRLK-KKLDEESITFGS 295
G +P VT+ +L GL + SD L R + + +T+G+
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 223
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 136/279 (48%), Gaps = 12/279 (4%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
CK ++D A FL M +G+EPNVV YN ++ CR K + A +F E
Sbjct: 460 CKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRM----------KNMDLARSIFSE 509
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
M +G++P+ ++SI++ + + Q + + +N M Y +++ LC G+
Sbjct: 510 MLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQ 569
Query: 135 IEDAEELLGEMVRNG-VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
A+E+L +++ S +YN + D + A++ YR+M E+ + PN+ T+
Sbjct: 570 TSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGIS-PNVVTF 628
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
LI F NRMD+ E+ + +K +L LD+ +Y LI G C+K K A F E++E
Sbjct: 629 TSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLE 688
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
GL+P + L G + L KK+ + I+
Sbjct: 689 LGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGIS 727
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 134/295 (45%), Gaps = 27/295 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
PNV Y +++ C++ +D+A EM+E+G++PN TY++L++G +
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEV 541
Query: 53 ------ASLHPNERFEKTIRNA-----------EKVFDEMRVRGIEPDVTSFSIVLHVYS 95
++ NE TI N E + + ++ + TS++ ++ +
Sbjct: 542 INQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFF 601
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ +++ M E GI P V T+TS++ C R++ A E++ EM +
Sbjct: 602 KEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVP 661
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
Y + + D A L+ ++ E L +PN+ YN LI F L +MD +++
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELLELGL-MPNVSVYNNLISGFRNLGKMDAAIDLYKK 720
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + DL +YT +I GL + A + E++ G++P ++ + L GL
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGL 775
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 136/325 (41%), Gaps = 50/325 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNER 60
P+ +++ + CK+ + MA L EM E+G V + TY ++ +
Sbjct: 272 PDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVK--------- 322
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A KV DEM GI V + + ++ + ++ +LD N M+E+G+ P
Sbjct: 323 -EGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKV 381
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA--------------------ETYNCF 160
++ +++ C +E A E+ M G++PS+ E +N
Sbjct: 382 MFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDS 441
Query: 161 FKEY----------------RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
F+ + +G+ DA + + +M E+ PN+ YN ++ +
Sbjct: 442 FETWIAHGFMCNKIFLLLCKQGKVDAATS---FLRMMENKGIEPNVVFYNNMMLAHCRMK 498
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
MD+ R I++ + L + +Y++LI G + Q + A + +MI +V +
Sbjct: 499 NMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYN 558
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDEE 289
T+ GL + + + + L +E
Sbjct: 559 TIINGLCKVGQTSKAKEMLQNLIKE 583
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 104/259 (40%), Gaps = 42/259 (16%)
Query: 43 NVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQL 102
N+L+ V +L P+ + ++++ E+ R +F+ +L+ Y R +
Sbjct: 135 NLLVMFVSSNPTLIPSAMVNNLVDSSKRFDFELSSR-------AFNYLLNAYIRNRRMDY 187
Query: 103 SLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS----------- 151
++D N M ++ + P V +V+ L I++A+E+ +MV GV+
Sbjct: 188 AVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMR 247
Query: 152 ------------------------PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
P ++ + KD A+ L R+M+E
Sbjct: 248 ASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVP 307
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
+ TY +I + M+ ++ + + G + + + + T LI G C + +A +
Sbjct: 308 ASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDF 367
Query: 248 FVEMIEKGLLPQKVTFETL 266
F M E+GL P KV F +
Sbjct: 368 FNRMEEEGLAPDKVMFSVM 386
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV +Y +LI G+ + ++D A +M+ G+ ++ TY +++G+ + +L
Sbjct: 692 MPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLIL--- 748
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++ E+ GI PD + ++++ S+ + + L MK+K P V
Sbjct: 749 -------ASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVL 801
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
Y++V+ G + +A + EM+ G+ +N
Sbjct: 802 IYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFN 839
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 137/283 (48%), Gaps = 14/283 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I G+ ++D A EM++RG++PNVVTY +++G+C+
Sbjct: 201 PNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCK---------- 250
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + AE VF +M +G++PD +++ ++H Y K + + L M G+ P T
Sbjct: 251 AQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT 310
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC+ GR +A M+R G+ P+ Y Y + + L M
Sbjct: 311 YGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMV 370
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ L P+ H +NI+ + +D I+N +K L D+ ++ LI LC+ +
Sbjct: 371 ENGLS-PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRV 429
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
+A F +M+ +G+ P F +L GL D W + K+
Sbjct: 430 DDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVD---KWEKAKE 469
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 142/298 (47%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ ++ SL+YG C +++ + A+ F EM+ +G+ P+VV +N +L +C +
Sbjct: 446 PNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ------- 498
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++ D M G PDV S++ ++ + + + L+ M G+ P T
Sbjct: 499 ---VMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWT 555
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C GRI+DA + EM+RNG++P TY+ + + A +LY M
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI 615
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
NI YNI++ N +D +++ + + L++ ++ ++I L + +
Sbjct: 616 TSGK-QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRN 674
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
++A F + GL+P T+ + LI+ L + L +++ T S N
Sbjct: 675 EDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLN 732
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 124/272 (45%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y LI+G+ + L M+E G+ P+ +N++ ++A
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA-------- 392
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A +F++M+ +G+ PDV +F ++ + + ++ K N M +G+ P +
Sbjct: 393 --MIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S+V LC+ + E A+E EM+ G+ P +N + A +L M+
Sbjct: 451 FNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLME 510
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P++ +Y LIG + R+D + + + L D +Y L+HG C +
Sbjct: 511 RVG-TRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+A F EM+ G+ P VT+ T+ GL +
Sbjct: 570 DDAYGVFREMLRNGITPGVVTYSTILHGLFTT 601
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 9/284 (3%)
Query: 10 LIYGWCKINRIDMA-ERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
L+ G C R+ A + + M E G P+VV+YN LL G C NE+ +
Sbjct: 135 LLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFC-------NEKRAEEALEL 187
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
+ + + R P+V S++ V++ + + + + M ++GI P V TYT+V+
Sbjct: 188 LHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDG 247
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC ++ AE + +M+ GV P +TYNC Y +++ +M L P
Sbjct: 248 LCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGL-KP 306
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
+ +TY L+ R R ++ + + ++ Y +LIHG K E
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
M+E GL P F ++ + M+ + K+ ++ ++
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLS 410
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 134/310 (43%), Gaps = 15/310 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y+ LI +C++ R++ G +++ G N + N LL G+C
Sbjct: 92 PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCD---------- 141
Query: 62 EKTIRNAEKVF-DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE---KGICP 117
K +R A + M G PDV S++ +L + + + +L+ L+ M + + P
Sbjct: 142 AKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP 201
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V +Y +V+ + G+++ A L EM+ G+ P+ TY + + A ++
Sbjct: 202 NVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+QM D P+ TYN LI ++++ + V + + L D +Y L++ LC
Sbjct: 262 QQMI-DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
+ +EA +F MI KG+ P + L G L L + E ++
Sbjct: 321 NGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380
Query: 298 QNYHFKPYRR 307
N F Y +
Sbjct: 381 FNIIFTAYAK 390
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 122/275 (44%), Gaps = 8/275 (2%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE-RFEKTIRNAEKVFDEMRVR 78
+D A + ++ +++ +N LL V R + + E + ++ E ++
Sbjct: 30 LDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
+ PD+ ++SI++ + R + + + + G ++K LC R+ +A
Sbjct: 90 -VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREA 148
Query: 139 EELL-GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD--LCVPNIHTYNI 195
++L M G +P +YN K + K A A++L M + C PN+ +Y
Sbjct: 149 MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAT 208
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
+I F ++D ++ + + ++ +YT +I GLC+ Q A F +MI+KG
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ P T+ L G + + W+ + + L+E S
Sbjct: 269 VKPDNDTYNCLIHGYLS---IGKWKEVVRMLEEMS 300
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 97/211 (45%), Gaps = 25/211 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV--CRRAS----- 54
P+ Y +L++G+C+ RID A EM+ G+ P VVTY+ +L+G+ RR S
Sbjct: 551 PDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKEL 610
Query: 55 ----LHPNERFEKTIRN--------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ +++ I N A K+F + + + ++T+F+I++ +
Sbjct: 611 YLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFK 670
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + ++ + G+ P V TY + + L G +E+ ++L M ++G +P++
Sbjct: 671 SGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRM 730
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
N + R D A ++ E + +
Sbjct: 731 LNALVRRLLHRGDITRAGAYLSKLDEKNFSL 761
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 142/278 (51%), Gaps = 14/278 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ +TSL+YGWC+ ++ A+ L +M E G+EP++V + LL+G +
Sbjct: 234 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA----- 288
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT-VA 120
+A + ++MR RG EP+V +++++ R K ++ E+ C +
Sbjct: 289 -----DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIV 343
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ C G I+ +L +M + GV PS TY + ++ ++L +M
Sbjct: 344 TYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM 403
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K C P++ YN++I + L + +WN ++ + L +D++ ++I+G +
Sbjct: 404 KRRG-CHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGF 462
Query: 241 WKEACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
EAC +F EM+ +G+ PQ T ++L L++ D L
Sbjct: 463 LIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKL 500
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 151/310 (48%), Gaps = 19/310 (6%)
Query: 2 PNVKMYTSLIYGWCKI-NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
PNV YT LI C+ R+D A R EM G E ++VTY L++G C+
Sbjct: 304 PNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG------- 356
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I V D+MR +G+ P ++ ++ + + + + L+ + MK +G P +
Sbjct: 357 ---MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 413
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y V++ C G +++A L EM NG+SP +T+ + + A +++M
Sbjct: 414 IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 473
Query: 181 KEDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCE 237
+ P T L+ + ++++M +++W+ + K S L++ ++T+ IH L
Sbjct: 474 VSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYA 533
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
K KEAC Y ++M+E L+PQ T+ L +GL + L R + ++ E+ + SE
Sbjct: 534 KGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGL---NKLYN-RTIAAEITEKVVKMASE- 588
Query: 298 QNYHFKPYRR 307
+ FK Y++
Sbjct: 589 REMSFKMYKK 598
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y ++ K + + + +M RG P+++ YNV++ C+
Sbjct: 374 MPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGE------ 427
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI--CPT 118
++ A ++++EM G+ P V +F I+++ ++ + + M +GI P
Sbjct: 428 ----VKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQ 483
Query: 119 VATYTSVVKCLCSCGRIEDAEEL 141
T S++ L ++E A+++
Sbjct: 484 YGTLKSLLNNLVRDDKLEMAKDV 506
>gi|356560497|ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 141/285 (49%), Gaps = 13/285 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + I+GWCKI R+D A + EM G P V++Y+ L+ C+
Sbjct: 210 PNAHTFNIFIHGWCKICRVDEAHWTIQEMKGYGFHPCVISYSTLIQCYCQ---------- 259
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ DEM+ +G +V +++ ++ +A K + +L M+ G P
Sbjct: 260 EGNFSRVYELLDEMQAQGCSANVITYTSIMCALGKAKKFEEALKVPERMRSSGCRPDTLF 319
Query: 122 YTSVVKCLCSCGRIEDAEELLG-EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ S++ L GR++DA ++ EM + GVSP+ TYN + A+++ ++M
Sbjct: 320 FNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTYNSMISMFCYHAQEKRALEILKEM 379
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMD-MVREIWNH-VKGSELGLDLDSYTMLIHGLCEK 238
+ C P+ TY+ LI ++D ++ EI N + L LDL +YT+LIHGLC +
Sbjct: 380 ENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINKQHLSLDLSTYTLLIHGLCRE 439
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
+ A F EMI++ ++P+ T L + Q +M + +++
Sbjct: 440 DRCNWAFSLFEEMIDQDIIPRYRTCRLLLDEVKQKNMYQAAEKIE 484
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 14/253 (5%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82
A R ++ G+E N + N+LL+ +C+ EK ++ A ++F E++ + I P
Sbjct: 162 AVRIFDDLQALGLEKNTESMNLLLDTLCK----------EKFVQQAREIFLELK-QHIAP 210
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
+ +F+I +H + + + + + MK G P V +Y+++++C C G ELL
Sbjct: 211 NAHTFNIFIHGWCKICRVDEAHWTIQEMKGYGFHPCVISYSTLIQCYCQEGNFSRVYELL 270
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
EM G S + TY K A+K+ +M+ C P+ +N LI
Sbjct: 271 DEMQAQGCSANVITYTSIMCALGKAKKFEEALKVPERMRSSG-CRPDTLFFNSLIHTLGR 329
Query: 203 LNRMDMVREIWN-HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK-GLLPQK 260
R+D +++ + + + + +Y +I C + K A + EM G P
Sbjct: 330 AGRLDDAADVFKVEMPKAGVSPNTSTYNSMISMFCYHAQEKRALEILKEMENSGGCKPDA 389
Query: 261 VTFETLYRGLIQS 273
T+ L + +S
Sbjct: 390 QTYHPLIKSCFRS 402
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 14/185 (7%)
Query: 2 PNVKMYTSLIYGWCKINRID-MAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P+ + SLI+ + R+D A+ F EM + GV PN TYN +++ C H E+
Sbjct: 315 PDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTYNSMISMFC----YHAQEK 370
Query: 61 FEKTIRNAEKVFDEMR-VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL--NFMKEKGICP 117
A ++ EM G +PD ++ ++ R+ K L ++ + + ++ +
Sbjct: 371 ------RALEILKEMENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINKQHLSL 424
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
++TYT ++ LC R A L EM+ + P T E + + A K+
Sbjct: 425 DLSTYTLLIHGLCREDRCNWAFSLFEEMIDQDIIPRYRTCRLLLDEVKQKNMYQAAEKIE 484
Query: 178 RQMKE 182
MK+
Sbjct: 485 DLMKK 489
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 141/274 (51%), Gaps = 11/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V ++ L+ G+CK I A+ L M+++ ++P+VVTY+ L++G C NE
Sbjct: 400 IPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL-----VNE- 453
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ AE +F+ M RG+ +V S++I+++ + + ++ M K I P V
Sbjct: 454 ----VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVI 509
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+S++ LC GRI A EL+ EM G P TYN + + A+ L ++
Sbjct: 510 TYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKL 569
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + P+++TY IL+ +++ R+++ + LD+ +YT++I G C+K
Sbjct: 570 KGQGI-RPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGL 628
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ EA +M E G +P T+E + L + D
Sbjct: 629 FDEALALLSKMEENGCIPDAKTYEIIILSLFEKD 662
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 142/287 (49%), Gaps = 15/287 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V MY ++I G CK ++ A E + + + P+V TYN L++G C L
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKL------ 384
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A +F++M + I PDV +FSI++ + + + + + L M ++ I P V T
Sbjct: 385 ----KDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ C + AE + M GV+ + ++YN + K + AMKL+++M
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWN--HVKGSELGLDLDSYTMLIHGLCEKQ 239
+ P++ TY+ LI R+ E+ + H +G + D+ +Y ++ LC+K
Sbjct: 501 HKQI-FPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQ--PDIITYNSILDALCKKH 557
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A ++ +G+ P T+ L +GL QS L R++ + L
Sbjct: 558 HVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDL 604
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 136/285 (47%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CK+ A L + V+P+VV YN +++G+C+ +K +
Sbjct: 301 YGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCK----------DKHVN 350
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A ++ E + I PDV +++ ++ + K + ++D N M K I P V T++ +V
Sbjct: 351 DAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILV 410
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G I++A+ +L M++ + P TY+ Y + N A ++ M +
Sbjct: 411 DGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGV- 469
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
N+ +YNI+I F + +D +++ + ++ D+ +Y+ LI GLC+ + A +
Sbjct: 470 TANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALE 529
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM +G P +T+ ++ L + + L KL + I
Sbjct: 530 LVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGI 574
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
NV+ Y +I G+CKI +D A + EM + + P+V+TY+ L++G+C+
Sbjct: 471 ANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGR------- 523
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A ++ DEM RG +PD+ +++ +L + H ++ L +K +GI P + T
Sbjct: 524 ---ISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNT 580
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +VK LC G++EDA ++ +++ G + Y + + + + A+ L +M+
Sbjct: 581 YTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKME 640
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
E+ C+P+ TY I+I + DM ++
Sbjct: 641 ENG-CIPDAKTYEIIILSLFEKDENDMAEKL 670
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P+V Y+SLI G CK RI A + EM RG +P+++TYN +L+ +C++
Sbjct: 505 FPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHH------ 558
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A + +++ +GI PD+ +++I++ ++ K + + + KG V
Sbjct: 559 ----VDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVY 614
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT +++ C G ++A LL +M NG P A+TY + + + A KL R+M
Sbjct: 615 AYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 116/280 (41%), Gaps = 46/280 (16%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
++++ G EP+ +T + G C + +H F D++ G D S+
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFH----------DKVIAMGFHLDQVSYG 302
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
+++ + + + +L+ L K + P V Y +++ +C + DA +L E V
Sbjct: 303 TLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSK 362
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA------ 202
+ P TYN + A+ L+ +M ++ +P+++T++IL+ F
Sbjct: 363 RIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNI-IPDVYTFSILVDGFCKDGNIKE 421
Query: 203 -----------------------------LNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
+N ++ I+N + + ++ SY ++I+
Sbjct: 422 AKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMIN 481
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
G C+ + EA + F EM K + P +T+ +L GL +S
Sbjct: 482 GFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKS 521
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 139/280 (49%), Gaps = 8/280 (2%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +++LIYG+C + + A EM+ + P+V T+N+L++ +C+ S +
Sbjct: 221 PDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNV 280
Query: 62 EKT-------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG 114
+ A+ VF+ + R + PDV S++I++ + +L N M+ KG
Sbjct: 281 LAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKG 340
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
I P TY+S++ LC RI A ELL +M G TY F + A+
Sbjct: 341 ITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAV 400
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
L +++K+ + PNI+TYNILI R + + I+ + + + +Y ++I+G
Sbjct: 401 ALVKKIKDQGI-QPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMING 459
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
LC + + EA +M + G P VT+ET+ R L ++D
Sbjct: 460 LCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKND 499
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 136/300 (45%), Gaps = 27/300 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + ++I +C + +D A L ++++ G P+ +T L+ G+C +H F
Sbjct: 81 PSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHF 140
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
D + RG + S+ I+++ + + + +L L + K + V
Sbjct: 141 H----------DHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVM 190
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ LC + +A EL +M+ VSP T++ + A L+ +M
Sbjct: 191 YSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMV 250
Query: 182 ----EDDLCVPNI------------HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL 225
D+C NI T N+L M +N+++ + ++N + + D+
Sbjct: 251 LTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDV 310
Query: 226 DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKK 284
SYT++I LC+ + EA F EM KG+ P KVT+ +L GL +S+ + W L +
Sbjct: 311 HSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQ 370
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 138/317 (43%), Gaps = 48/317 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----RASLHP 57
P+ T+LI G C ++ A F +I RG N V+Y +L+NG+C+ RA+L
Sbjct: 116 PDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQV 175
Query: 58 NERF---------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ EK + A +++ +M V+ + PDV +FS +++ +
Sbjct: 176 LRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCM 235
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR--NGVSPSA 154
+ + + + M I P V T+ +V LC G ++ + +L M++ N V+ +
Sbjct: 236 VGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAK 295
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
+N G++ P++H+Y I+I + +D ++N
Sbjct: 296 HVFNII-----GKRRVT----------------PDVHSYTIIIKRLCKIKMVDEALSLFN 334
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
++ + D +Y+ LI GLC+ ++ A + +M +G +T+ + L ++
Sbjct: 335 EMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNH 394
Query: 275 MLRTWRRLKKKLDEESI 291
+ L KK+ ++ I
Sbjct: 395 QVDKAVALVKKIKDQGI 411
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 45/214 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT +I CKI +D A EM +G+ P+ VTY+ L++G+C+ +ER
Sbjct: 308 PDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCK------SER- 360
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I +A ++ D+M RG DV +++ LH + H+ ++ + +K++GI P + T
Sbjct: 361 ---ISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINT 417
Query: 122 YTSVVKCLCSCGRIEDAE-----------------------------------ELLGEMV 146
Y ++ LC GR E+A+ LL +M
Sbjct: 418 YNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKME 477
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
NG +P TY + + + A KL R+M
Sbjct: 478 DNGCTPDVVTYETIIRALFKNDENHKAEKLLREM 511
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V YTS ++ CK +++D A + ++ ++G++PN+ TYN+L++G+C+ RF
Sbjct: 378 ADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEG------RF 431
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E NA+ +F ++ ++G + V +++I+++ ++ L M++ G P V T
Sbjct: 432 E----NAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVT 487
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
Y ++++ L AE+LL EM+ G+
Sbjct: 488 YETIIRALFKNDENHKAEKLLREMIARGL 516
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 117/274 (42%), Gaps = 13/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKIN--RIDMAERFLG--EMIERGVEPNVVTYNVLLNGVCRRASLH 56
M ++ +L Y K N +D+ + M+ P+++ +N +L + +
Sbjct: 4 MSQFSLFRTLHYSHSKFNSNHVDVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKS---- 59
Query: 57 PNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
N + I ++ +++ I P + +F+ V++ Y + + L + + G
Sbjct: 60 NNNNYPIAI----SLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYH 115
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P T T+++K LC G++ +A ++ G + +Y + A+++
Sbjct: 116 PDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQV 175
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
R++ + L N+ Y+ +I + E+++ + ++ D+ +++ LI+G C
Sbjct: 176 LRKI-DGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFC 234
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++KEA F EM+ + P TF L L
Sbjct: 235 MVGQFKEAFGLFHEMVLTNINPDVCTFNILVDAL 268
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 3/155 (1%)
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG--AMKLYRQMKEDDLCVPNIHT 192
+ DA M+R SPS +N + N A+ LY +++ + + P+I T
Sbjct: 27 VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAI-TPSIVT 85
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
+N +I + L MD + + D + T LI GLC K EA + +I
Sbjct: 86 FNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVI 145
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+G +V++ L GL + R ++ +K+D
Sbjct: 146 ARGFRLNEVSYGILINGLCKMGETRAALQVLRKID 180
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 149/304 (49%), Gaps = 15/304 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YT++I G+CK+ + A + EM + + P++VTY +++G+C+ +
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKM------ 398
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F+EM V+G+EPD +++ ++ Y +A + + + N M +KG+ P V T
Sbjct: 399 ----VEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVT 454
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++ LC G I+ A ELL EM R G+ P+ TYN + +KL M+
Sbjct: 455 YTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKL---ME 511
Query: 182 EDDLC--VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
E DL P+ TY L+ + + M E+ + L L ++ +L++G C
Sbjct: 512 EMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSG 571
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
++ + M+EKG++P TF +L + + +R + K + + + S N
Sbjct: 572 MLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYN 631
Query: 300 YHFK 303
K
Sbjct: 632 ILIK 635
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 130/281 (46%), Gaps = 46/281 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+L G CK ID+A L EM +G++PNV TYN ++NG+C+ ++
Sbjct: 450 PNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNI------ 503
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+T+ K+ +EM + G PD +++ ++ Y + + + + L M K + PT+ T
Sbjct: 504 EQTV----KLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVT 559
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C G +ED E L+ M+ G+ P+A T+ N MK Y
Sbjct: 560 FNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTF-------------NSLMKQY---- 602
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C+ N M EI+ + + D ++Y +LI G C+ +
Sbjct: 603 ----CIKN---------------NMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNM 643
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
KEA EM+EKG T++ L RG + R+L
Sbjct: 644 KEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKL 684
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 11/252 (4%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
C+I +D + + E+ +G++P+ YN ++ +C+ + AE++
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGE----------VVEAEQLLRG 337
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
MR G+ PD ++ V+ + + + + M+ K I P + TYTSV+ +C G+
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGK 397
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+ +A E+ EM+ G+ P TY Y + A ++ QM + L PN+ TY
Sbjct: 398 MVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGL-TPNVVTYT 456
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
L +D+ E+ + + L ++ +Y +++GLC+ ++ + EM
Sbjct: 457 ALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLA 516
Query: 255 GLLPQKVTFETL 266
G P +T+ TL
Sbjct: 517 GFYPDTITYTTL 528
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 11/256 (4%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
C I +A + E E GV N V+ N++L+ +C+ +R A + +
Sbjct: 218 CNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGK----------VREAHNLLVQ 267
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
M RG PDV S+ +V+ Y R + L ++ +K KG+ P Y +++ LC G
Sbjct: 268 MTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGE 327
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+ +AE+LL M + GV P Y + + + A KL+ +M+ + VP+I TY
Sbjct: 328 VVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKI-VPDIVTYT 386
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
+I +M RE++N + L D +YT LI G C+ + KEA +M++K
Sbjct: 387 SVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQK 446
Query: 255 GLLPQKVTFETLYRGL 270
GL P VT+ L GL
Sbjct: 447 GLTPNVVTYTALADGL 462
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+L+ +CK+ + A L M+ + ++P +VT+NVL+NG C L
Sbjct: 520 PDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGML------ 573
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ E++ + M +GI P+ T+F+ ++ Y + + + + M ++G+ P T
Sbjct: 574 ----EDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNT 629
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++K C +++A L EMV G S +A TY+ + + RK A KL+ +M+
Sbjct: 630 YNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMR 689
Query: 182 EDDLCVPNIHTYNILIGM 199
+ L V Y+I + +
Sbjct: 690 KHGL-VAEKDIYDIFVDV 706
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y LI G CK + A EM+E+G TY+ L+ G +R
Sbjct: 624 MPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKR-------- 675
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
K A K+F+EMR G+ + + I + V
Sbjct: 676 --KKFVEARKLFEEMRKHGLVAEKDIYDIFVDV 706
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 11/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV ++ LI G+CK ++ A+ L M+++ V+ +VVTYN L++G C
Sbjct: 266 PNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYC----------L 315
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A+ +F+ M RG+ PDV S+SI+++ + + ++ M K I P V T
Sbjct: 316 VKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVT 375
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+V LC GR A EL+ EM G + TYN + A+ L ++K
Sbjct: 376 YNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIK 435
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + P+I TY +LI + R+D ++++ + ++ +YT LI+G C K +
Sbjct: 436 EKGI-QPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFF 494
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
E +M + G +P +T+E L L + D
Sbjct: 495 DEGLAMLSKMKDNGCIPNAITYEILIHSLFEKD 527
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 139/285 (48%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G C++ A + L + + V PNVV Y+ +++ +C+ +K +
Sbjct: 166 YGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCK----------DKLVN 215
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A ++ EM + I PDV ++S ++ + K + ++D N M I P V T++ ++
Sbjct: 216 DAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILI 275
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G++ +A+ +L M++ V TYN Y K N A L+ M + +
Sbjct: 276 DGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGV- 334
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++ +Y+I+I F + +D +++ + ++ ++ +Y L+ GLC+ + A +
Sbjct: 335 TPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALE 394
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM ++G +T+ ++ + +++ + L K+ E+ I
Sbjct: 395 LVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGI 439
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 126/269 (46%), Gaps = 11/269 (4%)
Query: 14 WCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFD 73
+ ++ I + +++++G P+ VT+ +L+ G+C + +H F D
Sbjct: 103 FSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFH----------D 152
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
++ +G + D S+ +++ R + + ++ L + K + P V Y++++ +C
Sbjct: 153 KVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDK 212
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
+ DA +L EMV +SP TY+ + A+ L+ +M D++ PN++T+
Sbjct: 213 LVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNIN-PNVYTF 271
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
+ILI F ++ + + + + LD+ +Y L+ G C ++ +A F M +
Sbjct: 272 SILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQ 331
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+G+ P ++ + G + M+ +L
Sbjct: 332 RGVTPDVWSYSIMINGFCKIKMVDEAMKL 360
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SL+ G CK R A + EM +RG N++TYN +L+ +C+ N
Sbjct: 371 PNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICK------NNHV 424
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K I + +++ +GI+PD+ +++++++ + + + + KG P + T
Sbjct: 425 DKAIV----LLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYT 480
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YTS++ C+ G ++ +L +M NG P+A TY + + + A KL R+M
Sbjct: 481 YTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREM 539
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ Y S++ CK N +D A L ++ E+G++P++ TY VL+NG+C+ L
Sbjct: 407 NIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLD------ 460
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A+KVF+++ V+G P++ +++ +++ + L L+ MK+ G P TY
Sbjct: 461 ----DAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITY 516
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGV 150
++ L + AE+LL EM+ G+
Sbjct: 517 EILIHSLFEKDENDKAEKLLREMIARGL 544
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 103/243 (42%), Gaps = 6/243 (2%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + A + +M GI+PD + +++++ +S+ + S + +KG P T+
Sbjct: 72 KQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTF 131
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++K LC G + A ++V G +Y + A++L R++ +
Sbjct: 132 TILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRV-D 190
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L PN+ Y+ +I ++ +++ + + D+ +Y+ LI G C K K
Sbjct: 191 GKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLK 250
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGSEF 297
A F MI + P TF L G + +R + +KK + + +T+ S
Sbjct: 251 YAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLM 310
Query: 298 QNY 300
Y
Sbjct: 311 DGY 313
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 141/276 (51%), Gaps = 19/276 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y L G+C I R MA R L EM++RG+EP +VTYN +L G R
Sbjct: 206 PDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFR---------- 255
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I+ A + + EM+ R E DV +++ V+H + A + + + M ++G+ P VAT
Sbjct: 256 SNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVAT 315
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVS-PSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++++ LC +E+A + EM R GV P+ TYN + D A+ +M
Sbjct: 316 YNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERM 375
Query: 181 KEDDL--CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
E L CV TYN++I F ++ E++ + +LD+Y +LI + +
Sbjct: 376 GEHGLRACV---QTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVR 432
Query: 239 QKWKE---ACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+K ++ A + ++M+++G LP+K TF + GL+
Sbjct: 433 KKSEDLVVAGKLLMDMVDRGFLPRKFTFNRVLNGLV 468
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + MR + P + +I+ Y+ KP ++ M E GI + ++ +++
Sbjct: 122 SAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLL 181
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC R+E A LL + + P TYN Y K A+++ ++M + +
Sbjct: 182 DILCKSKRVETAHSLLKTLT-SRFRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGI- 239
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P + TYN ++ + N++ E + +K + +D+ +YT +IHG K+A +
Sbjct: 240 EPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKR 299
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSD 274
F EM+++G++P T+ L + L + D
Sbjct: 300 VFHEMVKEGVVPNVATYNALIQVLCKKD 327
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 82/216 (37%), Gaps = 50/216 (23%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGV-EPNVVTYNVLLNGVCRRASLHPNE 59
+PNV Y +LI CK + ++ A EM GV PNVVTYNV++ G+C
Sbjct: 310 VPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCH-------- 361
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
V D R G + M E G+ V
Sbjct: 362 -----------VGDMERALGF--------------------------MERMGEHGLRACV 384
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK---DANGAMKL 176
TY V++ C G +E A E+ G+M P+ +TYN RK D A KL
Sbjct: 385 QTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKL 444
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
M + +P T+N ++ + D +EI
Sbjct: 445 LMDMVDRGF-LPRKFTFNRVLNGLVITGNQDFAKEI 479
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 67/141 (47%), Gaps = 2/141 (1%)
Query: 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
A L+G M + PS +T + Y + A++ + M E + ++H++N L
Sbjct: 122 SAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRTFLSMAEHGI-RQDLHSFNTL 180
Query: 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
+ + R++ + + S D +Y +L +G C ++ A + EM+++G+
Sbjct: 181 LDILCKSKRVETAHSLLKTLT-SRFRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGI 239
Query: 257 LPQKVTFETLYRGLIQSDMLR 277
P VT+ T+ +G +S+ ++
Sbjct: 240 EPTMVTYNTMLKGYFRSNQIK 260
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +I G C + ++ A F+ M E G+ V TYNV++ C
Sbjct: 346 VPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGE------ 399
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH---VYSRAHKPQLSLDKLNFMKEKGICP 117
+ A +VF +M P++ ++++++ V ++ ++ L M ++G P
Sbjct: 400 ----VEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLP 455
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
T+ V+ L G + A+E+L R G
Sbjct: 456 RKFTFNRVLNGLVITGNQDFAKEILRMQSRCG 487
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 144/285 (50%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV MY ++I CK+ ++ A EM+ +G+ P+VVTY+ L++G C L
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKL------ 276
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A +F++M + I+PDV +F+I+++ + + K + + M ++GI P T
Sbjct: 277 ----KDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVT 332
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C + A+ + M + GV+P ++Y+ + K + AM L+++M
Sbjct: 333 YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMH 392
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ +P++ TY+ LI R+ ++ + + + ++ +Y ++ LC+ +
Sbjct: 393 RKNI-IPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQV 451
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A + +KG P T+ L +GL QS L R++ + L
Sbjct: 452 DKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDL 496
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 136/273 (49%), Gaps = 11/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + L+ +CK ++ + M+++G++PN VTYN L++G C
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC----------L 342
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A+ +F+ M G+ PD+ S+SI+++ + + K +++ M K I P V T
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ L GRI A +L+ +M GV P+ TYN + A+ L + K
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFK 462
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I TY+ILI +++ R+++ + LD+ +YT++I G C + +
Sbjct: 463 DKGF-QPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLF 521
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA +M + G +P T+E + L + D
Sbjct: 522 NEALALLSKMEDNGCIPDAKTYEIIILSLFKKD 554
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 145/298 (48%), Gaps = 22/298 (7%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI+G CK+ A L + V+PNVV YN +++ +C+ K +
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKV----------KLVN 242
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +F EM +GI PDV ++S ++ + K + ++D N M + I P V T+ +V
Sbjct: 243 EAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILV 302
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G++++ + + M++ G+ P+ TYN Y K+ N A ++ M + +
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN 362
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+I +Y+I+I F + + D ++ + + D+ +Y+ LI GL + + A Q
Sbjct: 363 -PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQ 421
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
+M ++G+ P T+ ++ L ++ + +++I ++F++ F+P
Sbjct: 422 LVDQMHDRGVPPNICTYNSILDALCKTHQV-----------DKAIALLTKFKDKGFQP 468
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 122/240 (50%), Gaps = 15/240 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ Y+ +I G+CKI + D A EM + + P+VVTY+ L++G+ +
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGR------- 415
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A ++ D+M RG+ P++ +++ +L + H+ ++ L K+KG P ++T
Sbjct: 416 ---ISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIST 472
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++K LC G++EDA ++ +++ G + Y + + N A+ L +M
Sbjct: 473 YSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKM- 531
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
ED+ C+P+ TY I+I + DM ++ + GL L+ Y + + L Q W
Sbjct: 532 EDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR--GLPLNFYDLYLTRLA--QTW 587
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 143/325 (44%), Gaps = 46/325 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ LI +C++ I A ++++ G P+ +T+ L G+C +
Sbjct: 118 PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQ------- 170
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I+ A D++ G D S+ ++H + + + +LD L + + P V
Sbjct: 171 ---IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVM 227
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ +C + +A +L EMV G+SP TY+ + A+ L+ +M
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287
Query: 182 EDDLCVPNIHTYNILIGMFMALNRM-------DMV------------------------- 209
+++ P+++T+NIL+ F +M DM+
Sbjct: 288 LENI-KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346
Query: 210 ---REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ I+N + + D+ SY+++I+G C+ +K+ EA F EM K ++P VT+ +L
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESI 291
GL +S + +L ++ + +
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGV 431
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+SLI G K RI A + + +M +RGV PN+ TYN +L+ +C+ +
Sbjct: 397 IPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCK------THQ 450
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K I K D +G +PD++++SI++ ++ K + + + KG V
Sbjct: 451 VDKAIALLTKFKD----KGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVY 506
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT +++ C G +A LL +M NG P A+TY + + + A KL R+M
Sbjct: 507 AYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 89/227 (39%), Gaps = 1/227 (0%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ +A +F+ + R P F+ +L ++ L M+ +GI P +
Sbjct: 66 VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ C C G I A + ++++ G P T+ K + A + ++
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
I +Y LI + ++ V G+ + ++ Y +I +C+ + EA
Sbjct: 186 FHFDQI-SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
F EM+ KG+ P VT+ L G L+ L K+ E+I
Sbjct: 245 FDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENI 291
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y+S S ++DA L ++R +P A +N K + + L ++M
Sbjct: 52 SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + PN+ NILI F L + ++ + D ++T L GLC K +
Sbjct: 112 EFRGI-KPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQ 170
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
++A + +++ G ++++ TL GL + R L +++D
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVD 217
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 149/286 (52%), Gaps = 12/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K Y+ L+ GW K + A EMI+ G P++VTY+++++ +C+
Sbjct: 235 PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGR------- 287
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + M +P +S+++H Y ++ + ++D M+ G+ VA
Sbjct: 288 ---VDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++ C R+++ +L EM GV+P++++ N + R + + A ++R+M
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI 404
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +C P+ TY ++I MF M+ ++W +++ + + ++++LI+GLCE++
Sbjct: 405 K--VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTT 462
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
++AC EMIE G+ P VTF L + LI+ + + L +K++
Sbjct: 463 QKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMN 508
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 105/217 (48%), Gaps = 2/217 (0%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
+V +F IV+ Y+RA K ++ N M++ + P + + ++ LC + A+E+
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
M R+ +P ++TY+ + + + A +++R+M D C P+I TY+I++ +
Sbjct: 227 ENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI-DAGCHPDIVTYSIMVDILCK 284
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
R+D I + S Y++L+H + + +EA F+EM G+
Sbjct: 285 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
F +L +++ ++ R+ K++ + +T S+ N
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCN 381
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 150/302 (49%), Gaps = 22/302 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ C ++ A L M++R P+V+TY +L+ CR
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR---------- 251
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A K+ DEMR RG PDV +++++++ + + ++ LN M G P V T
Sbjct: 252 DSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG-AMKLYRQM 180
+ +++ +CS GR DAE+LL +M+R G SPS T+N + RK G A+ + +M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN-FLCRKGLLGRAIDILEKM 370
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C PN +YN L+ F +MD E + D+ +Y ++ LC+ K
Sbjct: 371 PKHG-CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK-------KKLDEESITF 293
++A + ++ KG P +T+ T+ GL ++ +T + +K K L ++IT+
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG--KTGKAIKLLDEMRAKDLKPDTITY 487
Query: 294 GS 295
S
Sbjct: 488 SS 489
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 139/285 (48%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + ++ C R AE+ L +M+ +G P+VVT+N+L+N +CR+ L
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG----- 361
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M G +P+ S++ +LH + + K +++ L M +G P + T
Sbjct: 362 -----RAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G++EDA E+L ++ G SP TYN A+KL +M+
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
DL P+ TY+ L+G ++D + ++ + + + ++ ++ GLC+ ++
Sbjct: 477 AKDL-KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQT 535
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A + V MI +G P + ++ L GL M + L +L
Sbjct: 536 DRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 133/297 (44%), Gaps = 26/297 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+V YT LI C+ + + A + L EM +RG P+VVTYNVL+NG+C+ L
Sbjct: 237 PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 56 ---------HPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN I +AEK+ +M +G P V +F+I+++ R
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++D L M + G P +Y ++ C +++ A E L MV G P T
Sbjct: 357 KGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN A+++ Q+ C P + TYN +I + ++ + +
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKG-CSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ +L D +Y+ L+ GL + K EA ++F E G+ P VTF ++ GL ++
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKT 532
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 119/252 (47%), Gaps = 14/252 (5%)
Query: 25 RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84
+FL M+ G P+++ L+ G CR R A K+ + + G PDV
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFCRMGK----------TRKAAKILEVLEGSGAVPDV 172
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++++++ Y +A + +L L+ M + P V TY ++++ LC G+++ A E+L
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
M++ P TY + AMKL +M+ D C P++ TYN+L+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMR-DRGCTPDVVTYNVLVNGICKEG 288
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
R+D + N + S ++ ++ +++ +C +W +A + +M+ KG P VTF
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 265 TLYRGLIQSDML 276
L L + +L
Sbjct: 349 ILINFLCRKGLL 360
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 140/307 (45%), Gaps = 53/307 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ T+LI G+C++ + A + L + G P+V+TYNV+++G C+
Sbjct: 134 VPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGE------ 187
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I NA V D M V PDV +++ +L + K + +++ L+ M ++ P V
Sbjct: 188 ----INNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYR 178
TYT +++ C + A +LL EM G +P TYN GR D A+K
Sbjct: 241 TYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE--AIKFLN 298
Query: 179 QMKEDDLCVPNIHTYNILI------GMFMALNRM--DMVREIWNH------------VKG 218
M C PN+ T+NI++ G +M ++ DM+R+ ++ +
Sbjct: 299 DMPSSG-CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 219 SELGLDLD---------------SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
LG +D SY L+HG C+++K A +Y M+ +G P VT+
Sbjct: 358 GLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 264 ETLYRGL 270
T+ L
Sbjct: 418 NTMLTAL 424
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 146/277 (52%), Gaps = 11/277 (3%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
L+ +C+ +++ +A FLG+MI+ G EP++VT+ LLNG CR ++ +A
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY----------DAL 171
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+FD+M G +P+V ++ ++ ++ + +LD LN M++ GI P V TY S++ L
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
CS GR DA ++ M + + P T+N + A + Y +M L P+
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL-DPD 290
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
I TY++LI +R+D E++ + D+ +Y++LI+G C+ +K + + F
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EM ++G++ VT+ L +G ++ L + +++
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 36/320 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y ++I G CK ++D A L M + G+ P+VVTYN L++G+C R
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH---V 93
E + AE+ ++EM R ++PD+ ++S++++ +
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
YSR + + + FM KG P V TY+ ++ C ++E +L EM + GV +
Sbjct: 304 YSRLDEAE---EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV--PNIHTYNILIGMFMALNRMDMVRE 211
TY + Y N A +++R+M C PNI TYN+L+ +++
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMV---FCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
I ++ + + D+ +Y ++I G+C+ + +A + + +GL+P T+ T+ GL
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477
Query: 272 QSDMLRTWRRLKKKLDEESI 291
+ + R L +K+ E+ I
Sbjct: 478 KKGLRREADALFRKMKEDGI 497
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 134/260 (51%), Gaps = 13/260 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + +LI K R+ AE F EMI R ++P++VTY++L+ G+C + L
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD----- 308
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE++F M +G PDV ++SI+++ Y ++ K + + M ++G+ T
Sbjct: 309 -----EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ C G++ AEE+ MV GV P+ TYN A+ + M+
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + +I TYNI+I GM A D +I+ + L D+ +YT ++ GL +K
Sbjct: 424 KNGM-DADIVTYNIIIRGMCKAGEVAD-AWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481
Query: 241 WKEACQYFVEMIEKGLLPQK 260
+EA F +M E G+LP +
Sbjct: 482 RREADALFRKMKEDGILPNE 501
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 138/305 (45%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ ++ L+ K+ + D+ +M G+ N+ T N+LLN CR + L
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F +M G EP + +F +L+ + R + +L + M G P V
Sbjct: 138 F----------LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV 187
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ LC ++++A +LL M ++G+ P TYN + A ++ M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ ++ P++ T+N LI + R+ E + + L D+ +Y++LI+GLC +
Sbjct: 248 TKREI-YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
EA + F M+ KG P VT+ L G +S + +L ++ + ++T+
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 296 EFQNY 300
Q Y
Sbjct: 367 LIQGY 371
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 145/307 (47%), Gaps = 11/307 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P +Y +LI G+C+ ++ A G+M R ++P+ +TYN L+NG+C+ ER
Sbjct: 368 VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA------ER 421
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I NA+ + EM+ G+ P V +F+ ++ Y R + + L+ M+E G+ P V
Sbjct: 422 ----ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 477
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y S+V C G+I +A +L +M V P+A+ YN Y + A L +M
Sbjct: 478 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 537
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + + P+I TYN+LI +++ EI N + L D SY LI C +
Sbjct: 538 KSNGIS-PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGN 596
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
+A M + G+ T+ L GL + L L +K+ + ++ + N
Sbjct: 597 IDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNI 656
Query: 301 HFKPYRR 307
+ Y +
Sbjct: 657 MVEAYSK 663
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 138/347 (39%), Gaps = 65/347 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-SLHPNER 60
PN Y L+ G C+ R+ L EM + + P+ TY++L +G+ R S
Sbjct: 264 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSL 323
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F K+++N AE+V + G+ P ++ +++ Y +
Sbjct: 324 FGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 383
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + MK + I P TY +++ LC RI +A++LL EM NGV+P+ ET
Sbjct: 384 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 443
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDL------------------------------- 185
+N Y + +M+E+ L
Sbjct: 444 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 503
Query: 186 ---CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+PN YN +I ++ D + +K + + + +Y +LI GLC + +
Sbjct: 504 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 563
Query: 243 EACQYFVEMIEKGLLPQKVTFETL-----YRGLIQSDMLRTWRRLKK 284
EA + + L+P V++ TL YRG I L +R+ K
Sbjct: 564 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK-ALDLQQRMHK 609
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 15/268 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y ++I G K ++ +M+ G++PN +TYNVLL+G+CR R
Sbjct: 228 LPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAG------R 281
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+T + DEM + + PD ++SI+ SR + L + G+ T+
Sbjct: 282 MGET----SALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGV--TIG 335
Query: 121 TYTS--VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
YT ++ LC G++ AEE+L +V G+ P+ YN Y + GA +
Sbjct: 336 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 395
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
QMK + P+ TYN LI R+ +++ ++ + + ++++ LI
Sbjct: 396 QMKSRHI-KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 454
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ EM E GL P V++ ++
Sbjct: 455 GQLEKCFIVLSEMQENGLKPNVVSYGSI 482
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 128/304 (42%), Gaps = 19/304 (6%)
Query: 12 YGWCKINRIDMAERFLGEMI--------ERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
+ W K + +A LGE + + PN +YNV++ G+ R
Sbjct: 161 FAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRG-------- 212
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+A +VFDEM R + P+ +++ ++ + + + + M G+ P TY
Sbjct: 213 --GDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYN 270
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ LC GR+ + LL EM + P TY+ F D+ + L+ + ++
Sbjct: 271 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKN 330
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
+ + + +T +IL+ ++ + E+ + + L Y LI+G C+ + +
Sbjct: 331 GVTIGD-YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEG 389
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFK 303
A F +M + + P +T+ L GL +++ + + L ++ + + E N
Sbjct: 390 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 449
Query: 304 PYRR 307
Y R
Sbjct: 450 AYGR 453
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +I G + R A EM ER V PN +TYN +++G + L
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSL 253
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
D+M G++P+ +++++L RA + + L+ M + + P T
Sbjct: 254 R----------DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFT 303
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ + L G + L G+ ++NGV+ T + + A ++ + +
Sbjct: 304 YSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLV 363
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L VP YN LI + ++ + +K + D +Y LI+GLC+ ++
Sbjct: 364 NAGL-VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 422
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
A +EM + G+ P TF TL
Sbjct: 423 TNAQDLLMEMQDNGVNPTVETFNTL 447
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 82/213 (38%), Gaps = 35/213 (16%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P++++ +++ L S GR D G + G P +N + D A+ +
Sbjct: 123 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 182
Query: 177 YRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVR-------------------EIWNHV 216
R+M D PN +YN++I GM+ A D V I H+
Sbjct: 183 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 242
Query: 217 KGSEL--GLDLD-------------SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
KG +L G L +Y +L+ GLC + E EM + ++P
Sbjct: 243 KGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 302
Query: 262 TFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
T+ L+ GL ++ + L K + +T G
Sbjct: 303 TYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIG 335
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 150/298 (50%), Gaps = 15/298 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFL--GEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
YT LI G+CK+ + M E FL +M+++ V PNVVTY L +G+C++
Sbjct: 428 YTVLIDGYCKVGK--MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGD---------- 475
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ A ++ EM +G+E ++ +++ +++ +A + ++ + M E G+ P V TYT+
Sbjct: 476 VCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTT 535
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ LC ++ A LL EM+ G+ P+ TYN + G +L M E +
Sbjct: 536 IIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN 595
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
+ PN TYN L+ + M EI+ + E+ + ++Y +LI G C+ + KEA
Sbjct: 596 I-HPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
+ EMIEKG ++ L R L + RRL +K+ ++ +T + N++
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYI 712
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 139/288 (48%), Gaps = 12/288 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++G+C ++ ++ A + L EM RG+E N V Y ++ +C
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCD---------- 332
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +A +V ++M + G+ D F+ V+ + R + + + M+++G+ T
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC G +++AE +L EM G+ A TY Y A ++ +M
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN+ TY L + E+ + + L L++ +Y LI+GLC+
Sbjct: 453 QKRV-TPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKKKLDE 288
++A + ++M E GL P T+ T+ L QS L R L++ LD+
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 12/290 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ ++T+++ G+C+ + A + EM +RG+ + VTY L+NG+CR L
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL------- 406
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ AE+V EM +G++ D ++++++ Y + K + N M +K + P V TY
Sbjct: 407 ---KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T++ LC G + A ELL EM G+ + TYN + AM+ M E
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L P+++TY +IG +D + + + + +Y +L++G C + +
Sbjct: 524 AGL-KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRG-LIQSDMLRTWRRLKKKLDEESI 291
+ M+EK + P T+ +L + I+ +M T K L +E +
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 18/251 (7%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+D A + E+ E+ N +YN+LL +C I++A ++FDEM
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGR----------IKDAHQLFDEM---A 280
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
PDV ++ I++H Y + + ++ L+ M +G+ YTSV+ LC G++ DA
Sbjct: 281 SPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAV 340
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
++ +MV +GV A + + + D A + +M++ L + TY LI
Sbjct: 341 RVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGV-TYTALING 399
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ + ++ L +D +YT+LI G C+ K EA +M++K + P
Sbjct: 400 LCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPN 459
Query: 260 KVTFETLYRGL 270
VT+ L GL
Sbjct: 460 VVTYTALSDGL 470
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 52/226 (23%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
+R GI P S + VL QL + EK C +Y ++K LC+ GR
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAVQL----FQELPEKNTC----SYNILLKALCTAGR 268
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
I+DA +L EM SP P++ TY
Sbjct: 269 IKDAHQLFDEMA----SP-----------------------------------PDVVTYG 289
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
I++ + L+ ++ ++ + + L L+ +YT +I LC++ + +A + +M+
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349
Query: 255 GLLPQKVTFETLYRGLIQSDML---RTW--RRLKKKLDEESITFGS 295
G++ F T+ G + L R W K+ L + +T+ +
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTA 395
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y LI G CK + A F EMIE+G +YN L+ + ++
Sbjct: 632 VPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKK-------- 683
Query: 61 FEKTIRNAEKVFDEMRVRGI--EPDVTSFSIVL 91
K A ++F++MR + EPDV +F I L
Sbjct: 684 --KKFTEARRLFEKMRKDRLTAEPDVYNFYIDL 714
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 26/323 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
P+V YT+LIYG + R+ A +M+ + ++P+V T+N+L++G+C+
Sbjct: 237 PDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNV 296
Query: 54 -----------------SLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
SL K A VF+ M RG+ PDV S+SI+++ +
Sbjct: 297 LAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCK 356
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+++ M K + P TY S++ L GRI DA +L+ EM G T
Sbjct: 357 TKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVIT 416
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ + A+ L ++K+ + PNI+TY IL+ R+ + ++ +
Sbjct: 417 YSSLLDALCKNHQVDKAITLITKIKDQGI-QPNIYTYTILVDGLCKNGRLKDAQAVYQDL 475
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
LD+ Y ++++GLC++ + EA +M + G +P VT+ETL R L ++D
Sbjct: 476 LIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKN 535
Query: 277 RTWRRLKKKLDEESITFGSEFQN 299
+L +++ + GS +
Sbjct: 536 DKAVKLLREMIVQGSAVGSNISS 558
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 134/285 (47%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV MY ++I CK + A EMI + + P+VVTY L+ G L
Sbjct: 202 PNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRL------ 255
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +F++M ++ I+PDV +F+I++ + + + + + L M ++G+ + T
Sbjct: 256 ----KEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVT 311
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ + A + M R GV+P ++Y+ K + A+ L+++M
Sbjct: 312 YNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMH 371
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN TYN LI + R+ ++ N + D+ +Y+ L+ LC+ +
Sbjct: 372 SKSMA-PNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQV 430
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A ++ ++G+ P T+ L GL ++ L+ + + + L
Sbjct: 431 DKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDL 475
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 129/275 (46%), Gaps = 19/275 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ T+LI G C ++ A F ++I +G + V+Y L+NG+C+
Sbjct: 132 PDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGE------- 184
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R A +V ++ ++P+V ++ ++ + + D + M K I P V T
Sbjct: 185 ---TRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVT 241
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF----KEYRGRKDANGAMKLY 177
YT+++ GR+++A L +M+ + P T+N KE +K N +
Sbjct: 242 YTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMI 301
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+Q + NI TYN L+ + + + + ++N + + D+ SY+++I+GLC+
Sbjct: 302 KQGVDS-----NIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCK 356
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ EA F EM K + P VT+ +L GL++
Sbjct: 357 TKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLK 391
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 119/272 (43%), Gaps = 19/272 (6%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V+P + +N +L+ + + H F K +M ++ I+PD+ +F+I+++ +
Sbjct: 61 VQP-IFEFNKILSSLVKLNHFHTAISFSK----------QMELKQIQPDLFTFNILINCF 109
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ L + + G P T T+++K LC G++ +A +++ G
Sbjct: 110 CHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQ 169
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV-PNIHTYNILIGMFMALNRMDMVREIW 213
+Y + A+++ R++ D L V PN+ YN +I + ++
Sbjct: 170 VSYGTLINGLCKTGETRAALQVLRKI--DGLLVQPNVVMYNTIIDSLCKDKLVIHASDLC 227
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + + D+ +YT LI+G + KEA F +M+ K + P TF L GL +
Sbjct: 228 SEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKE 287
Query: 274 DMLRTWRR-----LKKKLDEESITFGSEFQNY 300
++ R +K+ +D +T+ S Y
Sbjct: 288 GEMKKARNVLAVMIKQGVDSNIVTYNSLMDGY 319
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 139/286 (48%), Gaps = 11/286 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT L+ CK RI A L +MIE G PNVVTYN L+NG C+ ++
Sbjct: 100 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMD----- 154
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F++M PDV +++I++ Y + +PQ L M + G P T
Sbjct: 155 -----EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 209
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ L G+ DA L M+R PS T+N + + A +L+ Q+
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELF-QLM 268
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C+P+I+TYNI+I NR+D R++ + + D+ +Y ++ GLC+ +
Sbjct: 269 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQV 328
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
EA + + + G VT TL GL +S L +L ++++
Sbjct: 329 DEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREME 374
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 143/315 (45%), Gaps = 26/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PNV Y +LI G+CK+ +D A +M+E P+V TYN+L++G C+
Sbjct: 135 PNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKL 194
Query: 52 -----RASLHPN----ERFEKTIRNAEKVFDEMRV------RGIEPDVTSFSIVLHVYSR 96
+ PN ++ + K D + R +P +F++++ ++ +
Sbjct: 195 LQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 254
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ L+ + M ++G P + TY ++ C RI+DA +LL M G P T
Sbjct: 255 VGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVT 314
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + A ++Y ++ + ++ T + LI R+D ++ +
Sbjct: 315 YNSIVSGLCKASQVDEAYEVYEVLRNGGYFL-DVVTCSTLIDGLCKSRRLDDAEKLLREM 373
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + D+ +YT+LIHG C+ + ++ +F EM++KG +P +T+ + L +S +
Sbjct: 374 ERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARV 433
Query: 277 RTWRRLKKKLDEESI 291
R L K + E +
Sbjct: 434 RDGCMLLKTMLERGV 448
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 135/306 (44%), Gaps = 45/306 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y++LI G+CK A R L EM +RG+ P+ YN ++ G+C N R
Sbjct: 31 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLC------DNGRV 84
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + + + +M+ R P V +++I++ ++ + + L M E G P V T
Sbjct: 85 DSALVH----YRDMQ-RHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVT 139
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C G +++A L +M+ N SP TYN Y ++ KL ++M
Sbjct: 140 YNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV 199
Query: 182 E--------------DDL--------------------CVPNIHTYNILIGMFMALNRMD 207
+ D L C P+ T+N++I MF + ++D
Sbjct: 200 KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLD 259
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ E++ + D+ +Y ++I G C + +A Q M E G P VT+ ++
Sbjct: 260 LAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIV 319
Query: 268 RGLIQS 273
GL ++
Sbjct: 320 SGLCKA 325
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 25/175 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y +I G C+ NRID A + L M E G P+VVTYN +++G+C+ + +
Sbjct: 274 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 333
Query: 61 FEKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ +RN AEK+ EM G PDV +++I++H +
Sbjct: 334 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 393
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+A + SL + M +KG PTV TY+ V+ LC R+ D LL M+ GV
Sbjct: 394 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGL---DLDSYTMLIHGLCEKQKWKEACQYFVE 250
N L+ F+ R +E ++ K GL D +Y+ LI+G C+ + +++A + E
Sbjct: 2 NCLLSAFV---RKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDE 58
Query: 251 MIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKKLDEESITF 293
M ++G++P + T+ +GL + L +R +++ IT+
Sbjct: 59 MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITY 105
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 155/317 (48%), Gaps = 27/317 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRR-----ASL 55
PN Y ++I GWCK+ R+D A + EM+ +G V+P V YN L+ G C + A L
Sbjct: 106 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 165
Query: 56 HPNERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ + E+ + A ++ +EM +G+ PDV +++I+++ +
Sbjct: 166 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 225
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + +L+ M +G+ TV TYTS++ L G++++ ++L E VR G+ P
Sbjct: 226 KEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV 285
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
YN + + + A ++ +M++ + P+ TYN L+ L R+D R++ +
Sbjct: 286 LYNALINSHSTSGNIDRAFEIMGEMEKKRIA-PDDVTYNTLMRGLCLLGRVDEARKLIDE 344
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ + DL +Y LI G K K+A + EM+ KG P +T+ L +GL ++
Sbjct: 345 MTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 404
Query: 276 LRTWRRLKKKLDEESIT 292
+ K++ E IT
Sbjct: 405 GDDAENMVKEMVENGIT 421
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 118/273 (43%), Gaps = 46/273 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI G CK + A M RGV VVTY L+ + ++
Sbjct: 212 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQ------- 264
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ +K+FDE RGI PD+ ++ +++ +S + + + + M++K I P T
Sbjct: 265 ---VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 321
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ LC GR+++A +L+ EM + G+ P TYN Y + D A+++ +M
Sbjct: 322 YNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 381
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P + TYN LI GLC+ +
Sbjct: 382 NKGFN-PTLLTYN-----------------------------------ALIQGLCKNGQG 405
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+A EM+E G+ P T+ +L GL D
Sbjct: 406 DDAENMVKEMVENGITPDDSTYISLIEGLTTED 438
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 53 ASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
ASLHP + D R+R + T+F+I+L A KP +L+ L M
Sbjct: 11 ASLHPLLSALPSAPAFALFADMFRLR-LPLCTTTFNIMLRHLCSAGKPARALELLRQMPR 69
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEM-VRNGVSPSAETYNCFFKEYRGRKDAN 171
P TY +V+ CS GR++ A +++ EM R G++P+ TY + +
Sbjct: 70 ----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVD 125
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A+K++ +M P YN LIG + ++D + + + + + +Y +L
Sbjct: 126 EAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 185
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+H L + EA + EM KGL P T+ L G
Sbjct: 186 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILING 223
>gi|449442339|ref|XP_004138939.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Cucumis sativus]
Length = 559
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 139/288 (48%), Gaps = 14/288 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y + +GWC++ R L EMIE G +P+ TYN + C+ L
Sbjct: 257 PDANTYNIMFFGWCRVRNPGRGMRVLEEMIELGFDPDNFTYNTAIASFCKAGML------ 310
Query: 62 EKTIRNAEKVFDEMRVRGI---EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ A ++F+ MR +G P +++I++ + + L +M + G P
Sbjct: 311 ----KEACELFEFMRTKGSALSSPTAKTYAIMIVALVNNGRMEECFKFLEYMIKSGCLPD 366
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V+TY +++ +C G++++A L EM + G P TYNCF K K ++ A++
Sbjct: 367 VSTYKEMIEGICVAGKVQEAYMFLEEMGKKGYPPDIVTYNCFLKVLCDNKMSDDALRHCD 426
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M E C+P++ TYN+LI MF +N + +IW + D+DSY ++I GL
Sbjct: 427 RMIEVG-CLPSVQTYNMLISMFFEMNDHNGAFQIWLEMDRYGCTRDVDSYCIMIEGLFGC 485
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
K +AC E++ KG+ F++ L + L+ RL + +
Sbjct: 486 NKVGDACLLLEEVVNKGMKLPFRKFDSFLMQLSVNGNLKGIHRLSEHM 533
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +I G C ++ A FL EM ++G P++VTYN L +C N+
Sbjct: 364 LPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKGYPPDIVTYNCFLKVLC------DNKM 417
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +R+ D M G P V ++++++ ++ + + M G V
Sbjct: 418 SDDALRHC----DRMIEVGCLPSVQTYNMLISMFFEMNDHNGAFQIWLEMDRYGCTRDVD 473
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y +++ L C ++ DA LL E+V G+ ++ F + + G +L M
Sbjct: 474 SYCIMIEGLFGCNKVGDACLLLEEVVNKGMKLPFRKFDSFLMQLSVNGNLKGIHRLSEHM 533
Query: 181 KE 182
++
Sbjct: 534 RK 535
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 72/195 (36%), Gaps = 36/195 (18%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEE----------------------------------LL 142
P + + ++ LC C +EDAE +L
Sbjct: 223 PEINAFNLLLDALCKCSLVEDAEALLKKVKKKLKPDANTYNIMFFGWCRVRNPGRGMRVL 282
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM--KEDDLCVPNIHTYNILIGMF 200
EM+ G P TYN + A +L+ M K L P TY I+I
Sbjct: 283 EEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIVAL 342
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+ RM+ + ++ S D+ +Y +I G+C K +EA + EM +KG P
Sbjct: 343 VNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKGYPPDI 402
Query: 261 VTFETLYRGLIQSDM 275
VT+ + L + M
Sbjct: 403 VTYNCFLKVLCDNKM 417
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV--CRRASLHPNE 59
PN++ YT L+ GWC++ + A + +MI+ +P++V +N +L G+ C++ S
Sbjct: 310 PNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRS----- 364
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+A K+F+ M+ +G PDV S++I++ + + K + ++ M+ G P
Sbjct: 365 -------DAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDA 417
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
A YT ++ + R++ LL EM NG P +TYN K ++ + A+++Y++
Sbjct: 418 AIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 477
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E+ + P HTY++++ + +M W+ +K D +SYT+ I GL
Sbjct: 478 MIENGI-KPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLG 536
Query: 240 KWKEACQYFVEMIEKGL-LPQ 259
+ EA +Y EMIEKG+ PQ
Sbjct: 537 RCAEAGKYLEEMIEKGMKAPQ 557
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YT LI G+ R+D L EM G P+ TYN L+ L N+R
Sbjct: 415 PDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIK-------LMTNKRM 467
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A +++ +M GI+P ++S+++ Y + ++ + + MK KG CP +
Sbjct: 468 PD---DAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNS 524
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR--GRKD 169
YT + L S GR +A + L EM+ G+ YN F ++ GR D
Sbjct: 525 YTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPD 574
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 106/235 (45%), Gaps = 12/235 (5%)
Query: 39 VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
V T N LL+ + R K + A +F+++ R P++ +++++L+ + R
Sbjct: 278 VETINCLLDSLGR----------AKLGKEALTIFEKLHGR-FTPNLQTYTVLLNGWCRVR 326
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
+ N M ++ P + + ++++ L C + DA +L M G SP ++Y
Sbjct: 327 NLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYT 386
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
+++ + A++ + +M+ C P+ Y LI F RMD V + +K
Sbjct: 387 ILVRDFCKQAKMKEAVQYFEEMQGAG-CRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKA 445
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ D +Y LI + K+ +A + + +MIE G+ P T+ + + Q+
Sbjct: 446 NGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQT 500
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 10/189 (5%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC-SCGRIEDAEELLG- 143
+F++ ++ A + + ++ L MK+ V T + CL S GR + +E L
Sbjct: 245 TFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVET----INCLLDSLGRAKLGKEALTI 300
Query: 144 -EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFM 201
E + +P+ +TY + ++ A K++ QM ++D P+I +N ++ G+
Sbjct: 301 FEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDF-KPDIVAHNTMLEGLLR 359
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
R D ++ ++ +K D+ SYT+L+ C++ K KEA QYF EM G P
Sbjct: 360 CKKRSDAIK-LFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAA 418
Query: 262 TFETLYRGL 270
+ L G
Sbjct: 419 IYTCLITGF 427
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 116/291 (39%), Gaps = 17/291 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ K Y +++ K + + L EM E+ ++T VC +A ER
Sbjct: 208 DSKTYNTMMTILGKTRQFETMVSLLEEMAEK----ELLTMETFT--VCFKAFAAAKER-- 259
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN-FMKEKG-ICPTVA 120
+ A V + M+ + V + + +L RA +L + L F K G P +
Sbjct: 260 ---KKAVGVLELMKKYKYKVGVETINCLLDSLGRA---KLGKEALTIFEKLHGRFTPNLQ 313
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ C + +A ++ +M+ P +N + K + A+KL+ M
Sbjct: 314 TYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVM 373
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K P++ +Y IL+ F +M + + ++G+ D YT LI G +++
Sbjct: 374 KAKGPS-PDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKR 432
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM G P T+ L + + M R+ KK+ E I
Sbjct: 433 MDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGI 483
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 144/284 (50%), Gaps = 14/284 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT+L++ WC+ +D AE+ EM + G+ PNV TY +++ + R
Sbjct: 237 PDVVLYTTLVHAWCRSGCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQ------- 289
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++ +M G P+ +F+ ++ + +A + + L N M++ G P + T
Sbjct: 290 ---VPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIIT 346
Query: 122 YTSVVKCLCSCGR--IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++ C G+ ++ A +LL +M+ G +P T+N K + + A KLY +
Sbjct: 347 YNFLMETHCGKGQSNLDAAMKLLLKMIAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYER 406
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+E C PN+ TYN+L+ +F MDMV I + + ++++Y LI C +
Sbjct: 407 MQELQ-CKPNVITYNLLMKLFGKDKSMDMVLRIKKDMDAQGVEPNVNTYGALIETFCGRG 465
Query: 240 KWKEACQYFVEMIE-KGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
WK A EM+E K L P+K ++ + L ++ LR L
Sbjct: 466 NWKRAYATLREMLEVKSLKPKKPVYDMVLVLLRKAGQLRKHEEL 509
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 28/237 (11%)
Query: 51 RRASLHPNERFEKTIRNAEKVFDEM-----RVRGIEPDVTSFSIVLHVYSRAHKPQLSL- 104
RRA HP T A FD + + G+ P S + HV+ R + +
Sbjct: 61 RRA--HP-----ATPLPASPPFDPLPSLSTTLTGLLPSTPSPHLTFHVFGRLLALRRGIP 113
Query: 105 --DKLNFMKEKGICPTVAT------YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ L F + P++ T Y S++ L A LL EM + + S++
Sbjct: 114 FPEALAFFNH--VLPSLPTDSLPELYASMMDLLAKHHHFPLARHLLDEMRKRSIPISSQV 171
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+ Y ++ A L+R M+E VP+ L+G + +++
Sbjct: 172 ILALIRRYVRAGMSSEASDLFRSMEEYGGGVPDPAVLASLLGALSKKRLASEAQALFDSY 231
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF----ETLYRG 269
K S D+ YT L+H C +A Q F EM + G++P T+ + +YR
Sbjct: 232 K-SVFTPDVVLYTTLVHAWCRSGCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRA 287
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 142/278 (51%), Gaps = 14/278 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ +TSL+YGWC+ ++ A+ L +M E G+EP++V + LL+G +
Sbjct: 234 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA----- 288
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT-VA 120
+A + ++MR RG EP+V +++++ R K ++ E+ C +
Sbjct: 289 -----DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIV 343
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ C G I+ +L +M + GV PS TY + ++ ++L +M
Sbjct: 344 TYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM 403
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K C P++ YN++I + L + +WN ++ + L +D++ ++I+G +
Sbjct: 404 KRRG-CHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGF 462
Query: 241 WKEACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
EAC +F EM+ +G+ PQ T ++L L++ D L
Sbjct: 463 LIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKL 500
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 151/310 (48%), Gaps = 19/310 (6%)
Query: 2 PNVKMYTSLIYGWCKI-NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
PNV YT LI C+ R+D A R EM G E ++VTY L++G C+
Sbjct: 304 PNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG------- 356
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I V D+MR +G+ P ++ ++ + + + + L+ + MK +G P +
Sbjct: 357 ---MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 413
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y V++ C G +++A L EM NG+SP +T+ + + A +++M
Sbjct: 414 IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 473
Query: 181 KEDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCE 237
+ P T L+ + ++++M +++W+ + K S L++ ++T+ IH L
Sbjct: 474 VSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYA 533
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
K KEAC Y ++M+E L+PQ T+ L +GL + L R + ++ E+ + SE
Sbjct: 534 KGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGL---NKLYN-RTIAAEITEKVVKMASE- 588
Query: 298 QNYHFKPYRR 307
+ FK Y++
Sbjct: 589 REMSFKMYKK 598
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y ++ K + + + +M RG P+++ YNV++ C+
Sbjct: 374 MPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGE------ 427
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI--CPT 118
++ A ++++EM G+ P V +F I+++ ++ + + M +GI P
Sbjct: 428 ----VKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQ 483
Query: 119 VATYTSVVKCLCSCGRIEDAEEL 141
T S++ L ++E A+++
Sbjct: 484 YGTLKSLLNNLVRDDKLEMAKDV 506
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 146/304 (48%), Gaps = 22/304 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT L+ CK + A + L EM +G P+++TYNV++NG+C+
Sbjct: 188 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQ--------- 238
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + +A + + G EP+ S++IVL A + + + + M +KG P V
Sbjct: 239 -EGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVV 297
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++ LC G +E A E+L ++ + G +P++ +YN + +K + AM M
Sbjct: 298 TFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 357
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C P+I +YN L+ +D E+ + +K L SY +I GL + K
Sbjct: 358 VSRG-CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 416
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
KEA + EM+ KGL P +T+ T+ GL + D + EE+I + Q+
Sbjct: 417 TKEALELLNEMVTKGLQPDIITYSTISSGLCREDRI-----------EEAIRAFCKVQDM 465
Query: 301 HFKP 304
+P
Sbjct: 466 GIRP 469
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 137/291 (47%), Gaps = 14/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ G+C ++D A R + +M +EP+ TYN L+ G+C R
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRTG----- 173
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA V D+M RG PDV +++I+L + + ++ L+ M+ KG P + T
Sbjct: 174 -----NALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIIT 228
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y VV +C GR++DA E L + +G P+ +YN K + A KL +M
Sbjct: 229 YNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMS 288
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN+ T+N+LI ++ E+ + + + SY ++H C+++K
Sbjct: 289 QKGY-PPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKM 347
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + M+ +G P V++ TL L + + L +L ++ T
Sbjct: 348 DRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 398
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 132/271 (48%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++ G C+ R+D A FL + G EPN V+YN++L G+C ER+
Sbjct: 224 PDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTA------ERW 277
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +AEK+ EM +G P+V +F++++ R + +++ L+ + + G P +
Sbjct: 278 E----DAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLS 333
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C +++ A + MV G P +YN + + A++L Q+K
Sbjct: 334 YNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 393
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C P + +YN +I + E+ N + L D+ +Y+ + GLC + +
Sbjct: 394 -DKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRI 452
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+EA + F ++ + G+ P V + + GL +
Sbjct: 453 EEAIRAFCKVQDMGIRPNTVLYNAILLGLCK 483
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 133/313 (42%), Gaps = 67/313 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ G C R + AE+ + EM ++G PNVVT+N+L++ +CRR + P
Sbjct: 259 PNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEV 318
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+K + A + M RG PD+ S++ +L R
Sbjct: 319 LDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCR 378
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +++ L+ +K+KG P + +Y +V+ L G+ ++A ELL EMV G+ P T
Sbjct: 379 GGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIIT 438
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE-IWNH 215
Y+ LC R D + E I
Sbjct: 439 YSTI---------------------SSGLC------------------REDRIEEAIRAF 459
Query: 216 VKGSELGLDLDS--YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
K ++G+ ++ Y ++ GLC++++ A F+ MI G +P + T+ L GL
Sbjct: 460 CKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYE 519
Query: 274 DMLRTWRRLKKKL 286
+++ R L +L
Sbjct: 520 GLVKEARELLGEL 532
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 149/313 (47%), Gaps = 27/313 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS-LHPNER 60
PNV + SL+ G+CK +D A + LG M+ +G+ PNVVTY+ L++G+C+ L E
Sbjct: 125 PNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 184
Query: 61 FEKT------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E+ I AE++ M G PDV +S ++H + +
Sbjct: 185 LEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 244
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG-VSPSAE 155
+ K + L M+++ P V TY +V+ LC G+I +A+ +L +M +G V P
Sbjct: 245 SGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVV 304
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY+ A KL +M + C P++ TY +I R++ +
Sbjct: 305 TYSTVINGLCKSDMLVEAQKLLDRMCKAG-CNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 363
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+K + ++ +YT LI GLC+ +K EA + EM G P VT+ T+ GL S
Sbjct: 364 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 423
Query: 276 LRTWRRLKKKLDE 288
++ ++L +++ +
Sbjct: 424 IKEAQQLVQRMKD 436
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 131/253 (51%), Gaps = 14/253 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +Y+S+I+ +CK ++ A++ L EM ++ P+VVTYN +++G+C+
Sbjct: 230 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK------- 282
Query: 62 EKTIRNAEKVFDEMRVRG-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A+ + D+M+ G + PDV ++S V++ ++ + L+ M + G P V
Sbjct: 283 ---IAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVV 339
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ LC CGR+E+AE LL M R G +P+ TY + + A ++ +M
Sbjct: 340 TYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 399
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG--SELGLDLDSYTMLIHGLCEK 238
+ C PN+ TYN ++ R+ +++ +K +E D +Y +++ L
Sbjct: 400 RNAG-CPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSS 458
Query: 239 QKWKEACQYFVEM 251
+EA Q +M
Sbjct: 459 DLVQEAEQLLEQM 471
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 124/269 (46%), Gaps = 14/269 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T +I +D A L M G +PNVVTY L+ R
Sbjct: 23 PDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFAR---------- 69
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A K+ +EMR RG P++ ++++++ + + D + M E G P V T
Sbjct: 70 AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 129
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S+V C G ++DA +LLG MV G+ P+ TY+ + A ++ +MK
Sbjct: 130 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 189
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ TY+ LI ++++ ++ + GS D+ Y+ +IH C+ K
Sbjct: 190 ASGV-TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 248
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA + EM ++ P VT+ T+ GL
Sbjct: 249 LEAQKTLQEMRKQRKSPDVVTYNTVIDGL 277
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 4/228 (1%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ A ++ +EM+ G PD + + ++ + A ++D L M G P V TYT+
Sbjct: 6 LHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTA 62
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ ++E+A +LL EM G P+ TYN A + ++M E
Sbjct: 63 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
PN+ T+N L+ F +D R++ + + ++ +Y+ LI GLC+ QK+ EA
Sbjct: 123 F-APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEA 181
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ EM G+ P T+ L GL ++D + ++ +++ T
Sbjct: 182 KEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCT 229
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+++I G CK + + A++ L M + G P+VVTY +++G+C+ L
Sbjct: 300 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLE---- 355
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
AE + M+ G P+V +++ ++ +A K + + M+ G P +
Sbjct: 356 ------EAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLV 409
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMV--RNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
TY ++V LC GRI++A++L+ M R SP A TY A +L
Sbjct: 410 TYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLE 469
Query: 179 QM 180
QM
Sbjct: 470 QM 471
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 4/153 (2%)
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C+ G + A ELL EM G +P A T+ D +GAM R M C PN
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG----CDPN 56
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+ TY LI F +++ ++ ++ +L +Y +L+ LC+ A
Sbjct: 57 VVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 116
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+MIE G P +TF +L G + + R+L
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKL 149
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 145/327 (44%), Gaps = 49/327 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YT+LI G+CK + LGE+ RG P++VTY+ +++G+C+ L
Sbjct: 177 PDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRL------ 230
Query: 62 EKTIRNAEKVFDEM--------------------------RVRG------IEPDVTSFSI 89
R+A +F+EM R+ G PDV +++
Sbjct: 231 ----RDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTT 286
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ + + + + + M + P V T+TS+V LC GR+EDA ELL E+ R G
Sbjct: 287 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 346
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P+ TYNC Y A +L + VPN TYNIL+ R D
Sbjct: 347 CPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGF-VPNTVTYNILVAGCCRAGRTDQA 405
Query: 210 REIWNHV--KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ + + +G + Y +++ LC + +A Q++ EMI++G +P TF T+
Sbjct: 406 LQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVV 465
Query: 268 RGLIQSDMLRTWRRLKKKLDEESITFG 294
L ++ + L EE I +G
Sbjct: 466 FALCKAHQPQQAHELL----EEMIKYG 488
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 145/307 (47%), Gaps = 29/307 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ T ++ C +R+D A + EM+ RG+ N +TY+ L++G+C+ L
Sbjct: 71 VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVA 130
Query: 61 FEKT-------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+T + A ++M G PD+ +++ ++ +
Sbjct: 131 LVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFC 190
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
++ L+ L + +G P + TY++V+ LC GR+ DA ++ EM +P+A
Sbjct: 191 KSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAI 247
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN Y D + A++L +M DD C P++ TY L+ F + R+D E++
Sbjct: 248 TYNSLIGGYCRAGDMDEAIRLLGKMV-DDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQ 306
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ ++L D+ ++T L+ GLC + + ++A + E+ +G P T+ + G +++
Sbjct: 307 MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQ 366
Query: 276 LRTWRRL 282
+R L
Sbjct: 367 VRKAEEL 373
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 14/266 (5%)
Query: 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P + +NV++ G+CR L R+A V+ +M PD +++ ++H S+
Sbjct: 3 PGTLLHNVVIGGLCRAGRL----------RHALGVYRQMN-DAHPPDFLTYTKLVHGLSK 51
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + ++ L M P T T VV+ LC R++DA EL+ EM+ G++ +A T
Sbjct: 52 ARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAIT 111
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ + + A+ L M E C P + TYN +I F R+D +
Sbjct: 112 YSALVDGLCKCERLDEAVALVETMAERG-CAPTVVTYNSIITGFCRARRVDEAHGFMEQM 170
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
D+ +YT LI G C+ + + E+ +G P VT+ T+ GL ++ L
Sbjct: 171 VAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRL 230
Query: 277 RTWRRLKKKLD--EESITFGSEFQNY 300
R + +++ +IT+ S Y
Sbjct: 231 RDAVDIFEEMSCAPTAITYNSLIGGY 256
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y ++ G+CK N++ AE + + RG PN VTYN+L+ G CR
Sbjct: 349 PTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTD----- 403
Query: 62 EKTIRNAEKVFDEMRVRG--IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
A + D++ G V ++I+L R + ++ M ++G P
Sbjct: 404 -----QALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAA 458
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
AT+ +VV LC + + A ELL EM++ G +P T + Y
Sbjct: 459 ATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAY 503
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 149/303 (49%), Gaps = 22/303 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T LI G CK ++ A++ L M +G EP+++TYN L+NG+C L
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLE----- 303
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+F+ + RGI+ +V S++I+++ Y + K + M+ KG+ P+ T
Sbjct: 304 -----DATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVT 358
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GR+ A++L EM G TY A+ L++ +K
Sbjct: 359 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIK 418
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PNI ++IL+ +++ + ++ + + L D +Y +LI+GLC K
Sbjct: 419 KTE-HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGML 477
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
EA + +M EKG LP +TF + + L++ + + E+I E +N +
Sbjct: 478 SEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIH-----------EAIQLLEEMRNRN 526
Query: 302 FKP 304
F P
Sbjct: 527 FSP 529
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 149/339 (43%), Gaps = 51/339 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +Y+SL+ G C+ R+ A F EM RG+ +V TYN L++G+ R
Sbjct: 178 LPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTW 237
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F + M RG PD +F+I++ + K + L M KG P +
Sbjct: 238 F----------LNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDIL 287
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC G++EDA +L + G+ + +YN Y + + A +L+ +M
Sbjct: 288 TYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEM 347
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVR------------------------------ 210
+ L P+ TYN LIG R+ +
Sbjct: 348 RPKGL-KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGH 406
Query: 211 -----EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+++ +K +E +++ +++L+ G+C K +EA + F E+ + GL P + +
Sbjct: 407 LEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNI 466
Query: 266 LYRGLIQSDMLRTWRRLKKKLDE-----ESITFGSEFQN 299
L GL ML +L +++E +SITF QN
Sbjct: 467 LINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQN 505
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 132/280 (47%), Gaps = 46/280 (16%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +I CK A EMI G+ P+VV Y+ L++G+CR L
Sbjct: 145 DVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRL------- 197
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A + F EM RGI DV +++ ++H SRA + LN M ++G P T+
Sbjct: 198 ---KEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTF 254
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++ LC G++ +A+++L M ++G++
Sbjct: 255 TILIDGLCKEGKVGEAQQILELM-----------------HHKGKE-------------- 283
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P+I TYN L+ + +++ +++ + + L++ SY +LI+G C+ QK
Sbjct: 284 -----PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID 338
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
EA + F EM KGL P VT+ TL L QS +RT ++L
Sbjct: 339 EAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKL 378
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 121/254 (47%), Gaps = 11/254 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y LI G+CK +ID A R EM +G++P+ VTYN L+ +C+
Sbjct: 320 NVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGR-------- 371
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+R A+K+F EM+ G ++++ ++L + + ++D +K+ P + +
Sbjct: 372 --VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVF 429
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ ++ +C G++E+A + E+ +NG+ P YN + + A+KL QM+E
Sbjct: 430 SILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE 489
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C+P+ T+N++I + N + ++ ++ D +ML+ +W
Sbjct: 490 KG-CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWH 548
Query: 243 EACQYFVEMIEKGL 256
A ++KG+
Sbjct: 549 AALVSLPNALQKGV 562
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
++G P T T++VK + I DA +L EM G+ A+TY +
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMF----MALNRMDMVREIWNHVKGSELGLDLDS 227
A+KL+ +MK + C ++ TY ++I M +DM E+ G+ + D+
Sbjct: 130 LAIKLHEKMKGN--CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMI----GAGILPDVVV 183
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR--TW 279
Y+ L+ GLC + KEA ++F EM +G+ T+ +L GL ++ + + TW
Sbjct: 184 YSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTW 237
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
++ G P A T K A++L+ +M E L + TY ILI +
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGL-FGDAKTYGILINGLCKARK 127
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ ++ +KG+ G D+ +Y M+I LC+ EA F EMI G+LP V + +
Sbjct: 128 TGLAIKLHEKMKGNCKG-DVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSS 186
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESIT 292
L GL + L+ K+++ I+
Sbjct: 187 LMDGLCRFGRLKEALEFFKEMEGRGIS 213
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI G C + A + L +M E+G P+ +T+NV++ + + +H
Sbjct: 459 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIH----- 513
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
A ++ +EMR R PD S++L + S + +L L +KG+
Sbjct: 514 -----EAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 562
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 133/268 (49%), Gaps = 13/268 (4%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y +LI G+C+ RID A+ M G EP++VTYNV LN C E +
Sbjct: 222 VYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCD----------ELML 271
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLS-LDKLNFMKEKGICPTVATYTS 124
+A+K+ M GIEPDV S++ +L + + P + L N M KG+C V +Y +
Sbjct: 272 DDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVV-SYNT 330
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++K C G A +L EM + G+ P T+ F K + G+ N A KL QM E
Sbjct: 331 IIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMG 390
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
L P+ Y +I +++M I+ + + D+ S+ LI+G C+ + EA
Sbjct: 391 LS-PDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEA 449
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ EM +G P +VT++ + GLI+
Sbjct: 450 MHLYEEMQNRGSYPDEVTYKLIIGGLIE 477
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 125/293 (42%), Gaps = 61/293 (20%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------L 55
P++ Y + +C +D A++ L M G+EP+V +YN LL G+C+ L
Sbjct: 253 PDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLL 312
Query: 56 HPNERFEKTI-------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
N+ + K + +A K+F+EM +GI PDV +F+I + +
Sbjct: 313 MTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLG 372
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ L+ M E G+ P YT+++ LC G++E A + +MV G+SP +
Sbjct: 373 KGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVIS 432
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N + + AM LY +M+ P+ TY ++IG
Sbjct: 433 FNALINGFCKCSRVSEAMHLYEEMQNRG-SYPDEVTYKLIIG------------------ 473
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
GL E++K AC + +M++KG + +TL RG
Sbjct: 474 -----------------GLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRG 509
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 129/282 (45%), Gaps = 24/282 (8%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
RID+A ++++ G +P+VVTY ++++GVC+ ++F+ I + + +M
Sbjct: 128 GRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKI------KKFDTAI----QFWRDMIH 177
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKL-NFMKEKGICPTVATYTSVVKCLCSCGRIE 136
+G PD + ++ K L+ + + + MK + + Y +++ C GRI+
Sbjct: 178 KGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRID 237
Query: 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
A+ + M RNG P TYN F + + A KL + M+ + P++++YN L
Sbjct: 238 KAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGI-EPDVYSYNQL 296
Query: 197 IGMFMALNRMD-----MVREIWNHVKGSELGL-DLDSYTMLIHGLCEKQKWKEACQYFVE 250
+ N D M ++W GL D+ SY +I C+ A + F E
Sbjct: 297 LKGICKGNCPDKAYLLMTNKMWPK------GLCDVVSYNTIIKAFCKIGDTTSAYKLFEE 350
Query: 251 MIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
M +KG+ P VTF + + ++L ++ E ++
Sbjct: 351 MGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLS 392
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 110/257 (42%), Gaps = 10/257 (3%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
+R D+A + +M RG + TY+ + G+C+ K +++ +M
Sbjct: 58 SRFDLANHYYSQMGTRGFSLSSFTYSRFITGLCK----------VKNFTFIDELLHDMET 107
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
PD+ +F+I LH+ + L+L+ + + G P V TYT ++ +C + +
Sbjct: 108 LNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDT 167
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A + +M+ G SP + + + A +L + + + YN LI
Sbjct: 168 AIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALI 227
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
F R+D + I + ++ + DL +Y + ++ C++ +A + M G+
Sbjct: 228 SGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIE 287
Query: 258 PQKVTFETLYRGLIQSD 274
P ++ L +G+ + +
Sbjct: 288 PDVYSYNQLLKGICKGN 304
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + L + R + A +M G S S+ TY+ F K+ +L M+
Sbjct: 47 YNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDME 106
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C+P+I +NI + + R+D+ E++ + + D+ +YT++IHG+C+ +K+
Sbjct: 107 TLN-CLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKF 165
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A Q++ +MI KG P + GL
Sbjct: 166 DTAIQFWRDMIHKGFSPDNKACGAIVVGL 194
>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 135/284 (47%), Gaps = 12/284 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + I+GWCK NR+D AE + EM G P V++Y+ ++ CR+++
Sbjct: 213 PNTHTFNIFIHGWCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNF------ 266
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R ++ D+M+ +G P+V +++ ++ ++ + + +L M+ G P
Sbjct: 267 ----RKVYELLDDMQAQGCAPNVVTYTTIMCSLTKVEQFEEALQIAERMRSVGCKPDTLF 322
Query: 122 YTSVVKCLCSCGRIEDAEELLG-EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ L G++ +A + EM + GV P+ TYN + A+ L R++
Sbjct: 323 YNALIHTLGRAGQLREAVRVFEVEMPKTGVPPNTSTYNSMIAMFCHHSQEQKALNLLREI 382
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH-VKGSELGLDLDSYTMLIHGLCEKQ 239
+ C P+I TY ++ ++D + + V L LD+ +YT+LIHGLC
Sbjct: 383 ENSTFCKPDIQTYYPVLKSCFKTGKIDSLSNFLDDMVNKHHLSLDVSAYTLLIHGLCRAN 442
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
K + F EM+ K + P+ T L + Q +M R++
Sbjct: 443 KCEWGYNLFEEMVGKAITPRYKTCALLLDEIKQKNMHDAAERIE 486
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/231 (19%), Positives = 98/231 (42%), Gaps = 10/231 (4%)
Query: 60 RFEKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE---KGI 115
RF+ ++A +F R G E ++ +++ + + + +DK+ + E +G
Sbjct: 87 RFKDDWKSALGLFRWAESRLGYEHAPEAYDMMVDILGKLKQ----VDKMRALMEEMRQGN 142
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
++T ++ L G EDA + ++ + + E+ N + A
Sbjct: 143 LVRLSTVAKAMRRLAGAGEWEDAVRVFDDLGNFELEKNTESMNLLLDTLCKERKVEQARA 202
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
++ ++K PN HT+NI I + NR+D +KG + SY+ +I
Sbjct: 203 IFLELKPH--ISPNTHTFNIFIHGWCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSY 260
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
C + +++ + +M +G P VT+ T+ L + + ++ +++
Sbjct: 261 CRQSNFRKVYELLDDMQAQGCAPNVVTYTTIMCSLTKVEQFEEALQIAERM 311
>gi|449505615|ref|XP_004162522.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73400, mitochondrial-like [Cucumis sativus]
Length = 559
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 139/288 (48%), Gaps = 14/288 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y + +GWC++ R L EMIE G +P+ TYN + C+ L
Sbjct: 257 PDANTYNIMXFGWCRVRNPGRGMRVLEEMIELGFDPDNFTYNTAIASFCKAGML------ 310
Query: 62 EKTIRNAEKVFDEMRVRGI---EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ A ++F+ MR +G P +++I++ + + L +M + G P
Sbjct: 311 ----KEACELFEFMRTKGSALSSPTAKTYAIMIVALVNNGRMEECFKFLEYMIKSGCLPD 366
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V+TY +++ +C G++++A L EM + G P TYNCF K K ++ A++
Sbjct: 367 VSTYKEMIEGICVAGKVQEAYMFLEEMGKKGYPPDIVTYNCFLKVLCDNKMSDDALRHCD 426
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M E C+P++ TYN+LI MF +N + +IW + D+DSY ++I GL
Sbjct: 427 RMIEVG-CLPSVQTYNMLISMFFEMNDHNGAFQIWLEMDRYGCTRDVDSYCIMIEGLFGC 485
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
K +AC E++ KG+ F++ L + L+ RL + +
Sbjct: 486 NKVGDACLLLEEVVNKGMKLPFRKFDSFLMQLSVNGNLKGIHRLSEHM 533
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +I G C ++ A FL EM ++G P++VTYN L +C N+
Sbjct: 364 LPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKGYPPDIVTYNCFLKVLC------DNKM 417
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +R+ D M G P V ++++++ ++ + + M G V
Sbjct: 418 SDDALRHC----DRMIEVGCLPSVQTYNMLISMFFEMNDHNGAFQIWLEMDRYGCTRDVD 473
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y +++ L C ++ DA LL E+V G+ ++ F + + G +L M
Sbjct: 474 SYCIMIEGLFGCNKVGDACLLLEEVVNKGMKLPFRKFDSFLMQLSVNGNLKGIHRLSEHM 533
Query: 181 KE 182
++
Sbjct: 534 RK 535
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 72/195 (36%), Gaps = 36/195 (18%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEE----------------------------------LL 142
P + + ++ LC C +EDAE +L
Sbjct: 223 PEINAFNLLLDALCKCSLVEDAEALLKKVKKKLKPDANTYNIMXFGWCRVRNPGRGMRVL 282
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM--KEDDLCVPNIHTYNILIGMF 200
EM+ G P TYN + A +L+ M K L P TY I+I
Sbjct: 283 EEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIVAL 342
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+ RM+ + ++ S D+ +Y +I G+C K +EA + EM +KG P
Sbjct: 343 VNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKGYPPDI 402
Query: 261 VTFETLYRGLIQSDM 275
VT+ + L + M
Sbjct: 403 VTYNCFLKVLCDNKM 417
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 154/320 (48%), Gaps = 26/320 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
P+V +++LIYG+C + +++ A EM+ + + P+ T+N+L++ +C+ +L
Sbjct: 241 PDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNM 300
Query: 57 ----------PNER----------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN + A+ V + + G P+ S+ +++ + +
Sbjct: 301 LVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCK 360
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L N M+ KGI P TY S++ LC GRI A EL+ EM NG + T
Sbjct: 361 IKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFT 420
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YNC + A+ L +++K+ + P+++T+NILI + R+ ++++ +
Sbjct: 421 YNCLIDALCKNHHVDQAIALVKKIKDQGI-QPDMYTFNILIYGLCKVGRLKNAQDVFQDL 479
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
++ +Y ++++GLC++ + EA +M + G++P VT+ETL + L D
Sbjct: 480 LSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDEN 539
Query: 277 RTWRRLKKKLDEESITFGSE 296
+L +++ + + E
Sbjct: 540 EKAEKLLREMIARDVVYALE 559
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 138/323 (42%), Gaps = 44/323 (13%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV MY ++I CK + A +MI + + P+VVT++ L+ G C L
Sbjct: 207 NVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQL------- 259
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A +F EM ++ I PD +F+I++ + + + + L M ++G+ P V TY
Sbjct: 260 ---EEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTY 316
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK- 181
+S++ C ++ A+ +L + + G +P+A +Y + K + A+ L+ M+
Sbjct: 317 SSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQF 376
Query: 182 -------------EDDLC--------------------VPNIHTYNILIGMFMALNRMDM 208
D LC NI TYN LI + +D
Sbjct: 377 KGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQ 436
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+ +K + D+ ++ +LI+GLC+ + K A F +++ KG T+ +
Sbjct: 437 AIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVN 496
Query: 269 GLIQSDMLRTWRRLKKKLDEESI 291
GL + + L K+D+ I
Sbjct: 497 GLCKEGLFDEAEALLSKMDDNGI 519
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 138/297 (46%), Gaps = 26/297 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
P++ + LI +C + ++ A + ++++ G EP+ +T+N L+ G+C
Sbjct: 101 PDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHF 160
Query: 54 -------SLHPNERFEKTIRNAEKVFDEMR-----VRGIEPDVTSFSIVLH--VYSRAHK 99
H ++ T+ N E R +R I+ + ++V++ + K
Sbjct: 161 HDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCK 220
Query: 100 PQLSLDKLNF---MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L +D M K I P V T+++++ C G++E+A L EMV ++P T
Sbjct: 221 HKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYT 280
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N + GA + M ++ + +PN+ TY+ L+ + +N+++ + + N +
Sbjct: 281 FNILVDALCKEGNLKGAKNMLVVMMKEGV-MPNVVTYSSLMDGYCLVNQVNKAKHVLNTI 339
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ SY +I+G C+ + EA F +M KG+ P KVT+ +L GL +S
Sbjct: 340 SQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKS 396
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 98/217 (45%), Gaps = 1/217 (0%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
+ GI PD+ +F+I+++ Y + + + + + G P T+ +++K LC G+
Sbjct: 94 LEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGK 153
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+++A ++ G +Y + A+++ R++ + L N+ YN
Sbjct: 154 VKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKI-DGKLVKINVVMYN 212
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
+I + E+++ + ++ D+ +++ LI+G C + +EA F EM+ K
Sbjct: 213 TIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLK 272
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ P TF L L + L+ + + + +E +
Sbjct: 273 NINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGV 309
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 25/121 (20%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
P++ + LIYG CK+ R+ A+ +++ +G N TYN+++NG+C+ E
Sbjct: 451 PDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEAL 510
Query: 61 ---------------FEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+E I+ AEK+ EM R + + +VLH+ S
Sbjct: 511 LSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYALEGLEMVLHLESE 570
Query: 97 A 97
A
Sbjct: 571 A 571
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 134/287 (46%), Gaps = 10/287 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++K YT L+ GW + + + EM + G EP+ VTY +L+N C+ R+
Sbjct: 247 PDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCK------ARRY 300
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + ++F +M P + +++ + +L K G P T
Sbjct: 301 DAAV----ELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPT 356
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +VV C R++DA ++ EM + GV P TY+ + A ++++ M
Sbjct: 357 YNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMS 416
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P++ TY I++ MF R+DM +W+ +K + + ++ LI+ LC + K
Sbjct: 417 SEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKL 476
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
EAC+YF EM++ G+ P F L + L+ L +KLD+
Sbjct: 477 DEACKYFHEMLDMGIRPPAAMFSNLKQTLLDEGKQDMVLILAQKLDK 523
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 99/203 (48%), Gaps = 2/203 (0%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+ ++MR +G+ T F+++ Y+RA K + +++ M++ G+ P ++ + ++ LC
Sbjct: 167 LVNDMRSKGLLTQET-FALISRRYARARKVKEAVETFEKMEKFGLQPVLSDFNRLLDALC 225
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
+E A+E+ +M P ++Y + + ++ ++YR+MK++ P+
Sbjct: 226 KSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGF-EPDA 284
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
TY ILI R D E+++ ++ ++ Y LI+GL +++ EA Q+F
Sbjct: 285 VTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQFFER 344
Query: 251 MIEKGLLPQKVTFETLYRGLIQS 273
G P+ T+ + QS
Sbjct: 345 SKASGFTPEAPTYNAVVGSYCQS 367
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 125/283 (44%), Gaps = 12/283 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI KI + M + +M +G+ T+ ++ R + ++
Sbjct: 148 YNALIEALGKIKQFKMIWNLVNDMRSKGLLTQE-TFALISRRYAR----------ARKVK 196
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + F++M G++P ++ F+ +L ++ + + + + MK++ P + +YT ++
Sbjct: 197 EAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILL 256
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ + +E+ EM G P A TY + + + A++L+ +M E + C
Sbjct: 257 EGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKM-EANKC 315
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+P H Y LI + R+ + + K S + +Y ++ C+ + +A +
Sbjct: 316 MPTPHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYR 375
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
EM + G+ PQ T++ + LI++ + R+ + + E
Sbjct: 376 IVDEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSE 418
>gi|326524037|dbj|BAJ97029.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 599
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 134/276 (48%), Gaps = 13/276 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+++ YT+L+YGWC++ ++D A+ L M GV P+VV +N LL G + RFE
Sbjct: 191 SLRHYTALLYGWCRLAKLDEAKHVLARMKAAGVAPDVVVFNTLLAGFVA------DGRFE 244
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A ++ EM R P+ S++ ++ + + M+ KG P TY
Sbjct: 245 ----DAFELAREMERRDCPPNAVSYTTLMQGLGSKGRVDEVMRVFVEMRRKGCTPDSVTY 300
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++V C GR+ E L M R+G+ Y FF + + ++L +M+E
Sbjct: 301 GTLVTAFCKAGRLSQGYEFLDSMSRDGLRVDPGVYLGFFVAHEKEQQLEECLELMERMRE 360
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P+++ YN++I + L +WN + S L +D++ ++++GL +
Sbjct: 361 CR-CPPDLNIYNVVIRLSCKLGETKQAIALWNETENSGLSPGVDTFAIMVNGLVGQGSLV 419
Query: 243 EACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
+AC YF +M+ +GL PQ + L L++ + L
Sbjct: 420 DACNYFKDMVGRGLFVAPQYGVLKDLLNALVRDEKL 455
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 149/313 (47%), Gaps = 27/313 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS-LHPNER 60
PNV + SL+ G+CK +D A + LG M+ +G+ PNVVTY+ L++G+C+ L E
Sbjct: 247 PNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 306
Query: 61 FEK------------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E+ I AE++ M G PDV +S ++H + +
Sbjct: 307 LEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 366
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG-VSPSAE 155
+ K + L M+++ P V TY +V+ LC G+I +A+ +L +M +G V P
Sbjct: 367 SGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVV 426
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY+ A KL +M + C P++ TY +I R++ +
Sbjct: 427 TYSTVINGLCKSDMLVEAQKLLDRMCKAG-CNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 485
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+K + ++ +YT LI GLC+ +K EA + EM G P VT+ T+ GL S
Sbjct: 486 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 545
Query: 276 LRTWRRLKKKLDE 288
++ ++L +++ +
Sbjct: 546 IKEAQQLVQRMKD 558
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 132/288 (45%), Gaps = 18/288 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +I G+C + A L EM G P+ T+ ++ + L
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDL------ 163
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ D +R G +P+V +++ ++ ++RA K + ++ L M+E+G P + T
Sbjct: 164 -------DGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVT 216
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V LC + A++++ +M+ G +P+ T+N + R + + A KL M
Sbjct: 217 YNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMV 276
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN+ TY+ LI + +E+ +K + D +Y+ LIHGLC+ K
Sbjct: 277 AKGM-RPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKI 335
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML----RTWRRLKKK 285
+EA Q M G P V + ++ +S L +T + ++K+
Sbjct: 336 EEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQ 383
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 131/253 (51%), Gaps = 14/253 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +Y+S+I+ +CK ++ A++ L EM ++ P+VVTYN +++G+C+
Sbjct: 352 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK------- 404
Query: 62 EKTIRNAEKVFDEMRVRG-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A+ + ++M+ G + PDV ++S V++ ++ + L+ M + G P V
Sbjct: 405 ---IAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVV 461
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ LC CGR+E+AE LL M R G +P+ TY + + A ++ +M
Sbjct: 462 TYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 521
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG--SELGLDLDSYTMLIHGLCEK 238
+ C PN+ TYN ++ R+ +++ +K +E D +Y +++ L
Sbjct: 522 RNAG-CPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSS 580
Query: 239 QKWKEACQYFVEM 251
+EA Q +M
Sbjct: 581 DLVQEAEQLLEQM 593
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 131/278 (47%), Gaps = 16/278 (5%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
CK +R + + F E++ EP+V +YN++++G C LH A ++ +E
Sbjct: 90 CKKHR-EAGDLFRSELLA-SCEPDVCSYNIVISGFCNAGDLHA----------ALELLEE 137
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
M+ G PD + + ++ + A ++D L M G P V TYT+++ +
Sbjct: 138 MKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKK 194
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+E+A +LL EM G P+ TYN A + ++M E PN+ T+N
Sbjct: 195 LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGF-APNVMTFN 253
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
L+ F +D R++ + + ++ +Y+ LI GLC+ QK+ EA + EM +
Sbjct: 254 SLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTR 313
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
G+ P T+ L GL ++D + ++ +++ T
Sbjct: 314 GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCT 351
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 124/269 (46%), Gaps = 14/269 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T +I +D A L M G +PNVVTY L+ R
Sbjct: 145 PDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFAR---------- 191
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A K+ +EMR RG P++ ++++++ + + D + M E G P V T
Sbjct: 192 AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 251
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S+V C G ++DA +LLG MV G+ P+ TY+ + A ++ +MK
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 311
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ TY+ LI ++++ ++ + GS D+ Y+ +IH C+ K
Sbjct: 312 TRGV-TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 370
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA + EM ++ P VT+ T+ GL
Sbjct: 371 LEAQKTLQEMRKQRKSPDVVTYNTVIDGL 399
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNER 60
P+V Y ++I G CK+ +I A+ L +M E G V P+VVTY+ ++NG+C+
Sbjct: 387 PDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCK--------- 437
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A+K+ D M G PDV +++ ++ + + + + L MK G P V
Sbjct: 438 -SDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 496
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ LC ++++AE ++ EM G P+ TYN A +L ++M
Sbjct: 497 TYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 556
Query: 181 KEDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
K+ C P+ TY ++ M+ + + ++ +K +
Sbjct: 557 KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKST 596
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+++I G CK + + A++ L M + G P+VVTY +++G+C+ L
Sbjct: 422 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLE---- 477
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
AE + M+ G P+V +++ ++ +A K + + M+ G P +
Sbjct: 478 ------EAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLV 531
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMV--RNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
TY ++V LC GRI++A++L+ M R SP A TY A +L
Sbjct: 532 TYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLE 591
Query: 179 QMK 181
QMK
Sbjct: 592 QMK 594
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 92/219 (42%), Gaps = 13/219 (5%)
Query: 79 GIEPDVTSFS-------IVLHVYSRAHKPQLSLDKLNFMKEK--GICPTVATYTSVVKCL 129
IEPD++ FS IV V + +L+L + G T ++ S+++ L
Sbjct: 28 AIEPDLSPFSGASTTPRIVGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVL 87
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C + +A +L + P +YN + D + A++L +MK P+
Sbjct: 88 VRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGF-APD 146
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
T+ +I +D +H++ ++ +YT LI +K +EA +
Sbjct: 147 AFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLE 203
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
EM E+G P VT+ L L + M+ + + KK+ E
Sbjct: 204 EMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 242
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 11/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + L+ G+CK R+ A+ L M+++G++P+V TYN L++ C
Sbjct: 280 PNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYC----------L 329
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A+ +F+ + RG+ P++ S+SI++H + + K +++ M I P V T
Sbjct: 330 VKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVT 389
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC G+I A +L+ EM GV TYN + A+ L +MK
Sbjct: 390 YNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 449
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + P+I TY L+ R++ R ++ + LD++ YT +I G C +
Sbjct: 450 DEGI-QPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLF 508
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
E+ +M E G +P VT+E + L D
Sbjct: 509 DESLDLLSKMEENGCIPNAVTYEIIICSLFDKD 541
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 143/279 (51%), Gaps = 11/279 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV MY ++I CK+ ++ A EM+ +G+ P+VVTYN L++G C +
Sbjct: 210 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKM------ 263
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A +F++M I P+V +F+I++ + + + + + + L M ++GI P V T
Sbjct: 264 ----KDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFT 319
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C + A+ + + + GV+P+ +Y+ + K + AM L+++M
Sbjct: 320 YNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMH 379
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+++ +P++ TYN LI L ++ ++ + + + D +Y ++ LC+ +
Sbjct: 380 CNNI-IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQV 438
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR 280
+A +M ++G+ P T+ TL GL ++ L R
Sbjct: 439 DKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDAR 477
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 144/285 (50%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CK+ + A + L + + V+PNVV YN +++ +C+ K +
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKV----------KLVN 229
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++ EM +GI PDV +++ ++ + K + + D N M + I P V T+ +V
Sbjct: 230 EAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C R+++A+ +L M++ G+ P TYN Y K+ N A ++ + + +
Sbjct: 290 DGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVN 349
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PNIH+Y+I+I F + ++D ++ + + + D+ +Y LI GLC+ K A +
Sbjct: 350 -PNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALK 408
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM ++G+ K+T+ ++ L ++ + L K+ +E I
Sbjct: 409 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 453
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 46/296 (15%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI + ++ + ++ L ++++ G EPNV+T L+ G+C + +H +F
Sbjct: 113 LINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFH------- 165
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
D++ G + S+ +++ + + +L L + K + P V Y +++ +
Sbjct: 166 ---DKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSM 222
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C + +A +L EMV G+SP TYN + A L+ +M +++ PN
Sbjct: 223 CKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENIN-PN 281
Query: 190 IHTYNILIGMF-----------------------------MALNRMDMVRE------IWN 214
++T+NIL+ F ++R +V+E I+N
Sbjct: 282 VYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFN 341
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + ++ SY+++IHG C+ +K EA F EM ++P VT+ +L GL
Sbjct: 342 TISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGL 397
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y SLI G CK+ +I A + + EM +RGV + +TYN +L+ +C+ N +
Sbjct: 384 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCK------NHQ 437
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K I K+ DE GI+PD+ +++ ++ + + + + + KG V
Sbjct: 438 VDKAIALLTKMKDE----GIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVN 493
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT++++ CS G +++ +LL +M NG P+A TY + + + A KL R+M
Sbjct: 494 IYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 6/232 (2%)
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
+M GI D+ SI+++ +S+ + LS L + + G P V T T+++K LC G
Sbjct: 97 QMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKG 156
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
+I A + ++V G + +Y + A++L R++ + L PN+ Y
Sbjct: 157 QIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRV-DGKLVQPNVVMY 215
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N +I + ++ ++++ + + D+ +Y LI G C K K+A F +MI
Sbjct: 216 NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIF 275
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGSEFQNY 300
+ + P TF L G + L+ + +K+ + + T+ S Y
Sbjct: 276 ENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRY 327
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y S++ CK +++D A L +M + G++P++ TY L++G+C+ N R E
Sbjct: 425 YNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCK------NGRLE---- 474
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A VF+++ V+G DV ++ ++ + SLD L+ M+E G P TY ++
Sbjct: 475 DARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIII 534
Query: 127 KCLCSCGRIEDAEELLGEMVRNGV 150
L + AE+LL EM+ G+
Sbjct: 535 CSLFDKDENDKAEKLLREMITRGL 558
>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 139/263 (52%), Gaps = 12/263 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ YT+L+ WC + A R EM+E G++P+VV +N ++ G+ R P
Sbjct: 68 PDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLR-GQRRPE--- 123
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+F+ M+ +G P+V ++++++ + + K +++ M++ G P VAT
Sbjct: 124 ------AVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVAT 177
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + R++ LL EM + G P TYN K R + A ++Y++M
Sbjct: 178 YTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMI 237
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVR-EIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L P IHTYN+++ + R M+ +W + + D++SYT+ I+G +
Sbjct: 238 KKGL-EPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGR 296
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
+EAC+Y EMI+KG+ ++ +
Sbjct: 297 PEEACKYIEEMIQKGMKTPQIDY 319
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 4/242 (1%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
I+NA VF+ MR G + V SF+ +L ++ + + + M+++ P + +YT+
Sbjct: 17 IKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTA 75
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMKED 183
++ C+ + +A + EM+ NG+ P +N + RG++ A+K++ MK
Sbjct: 76 LMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPE-AVKMFELMKAK 134
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
PN+ TY +LI +MDM + ++ D+ +YT L+ G ++
Sbjct: 135 GP-APNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDR 193
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFK 303
EM +KG P T+ L + L +M R+ KK+ ++ + N K
Sbjct: 194 VTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMK 253
Query: 304 PY 305
Y
Sbjct: 254 SY 255
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT L+ G+ R+D L EM ++G P+ TYN L+ + R P++
Sbjct: 173 PDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNM--PDD-- 228
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP-QLSLDKLNFMKEKGICPTVA 120
A +++ +M +G+EP + ++++++ Y + + M KGICP V
Sbjct: 229 ------AARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVN 282
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
+YT + GR E+A + + EM++ G+ YN F ++
Sbjct: 283 SYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADF 326
>gi|125570550|gb|EAZ12065.1| hypothetical protein OsJ_01947 [Oryza sativa Japonica Group]
Length = 348
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 131/249 (52%), Gaps = 11/249 (4%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
GV P VVTY L+ G+C + P++ A + DEMR GIE ++ + + +++
Sbjct: 5 GVRPTVVTYGTLIEGLCVKR--RPDQ--------AIALLDEMREEGIEANLLTCNPIVYA 54
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
++A + Q + L G+ P ++T+ S+V C G + A +L M G+SP+
Sbjct: 55 LAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPT 114
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
TYN FF + D M Y +M + P+ TY +L+ M NR+++V ++
Sbjct: 115 TRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYS-PDQLTYVLLVKMLSRANRLELVVQMI 173
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ DL + TMLIH LC + +++EAC F +M ++G++PQ +T++ L R L +
Sbjct: 174 QEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRL 233
Query: 274 DMLRTWRRL 282
++ ++L
Sbjct: 234 GLVHLIQKL 242
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 25/169 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + SL+ G+CK + A L M ERG+ P TYN + + + F
Sbjct: 78 PNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNF 137
Query: 62 -EKTIRNA------------------------EKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
K I N ++ EMR G EPD+ + ++++H+ R
Sbjct: 138 YSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCR 197
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
H+ + + + M ++GI P TY +++ L G + ++L M
Sbjct: 198 RHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVHLIQKLTNLM 246
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 148/287 (51%), Gaps = 12/287 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ K Y+ L+ GW K + A EM++ G +P++VTY ++++ +C+
Sbjct: 177 IPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGR------ 230
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A + EM +P +S+++H Y ++ + ++ M+ I VA
Sbjct: 231 ----VDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVA 286
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C ++++A +L EM G+ P++ T N D + A +++R+M
Sbjct: 287 VYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRM 346
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +C P+ TY ++I MF ++++M ++W +++ + + ++++LI+GLC+K
Sbjct: 347 IK--VCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGN 404
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+AC EMIEKG+ P VTF L + LI+ L++K++
Sbjct: 405 ASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGREDVLEFLQEKMN 451
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 137/331 (41%), Gaps = 51/331 (15%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV+ + ++ + + ++ A M + V PN+ +N LL+ +C+
Sbjct: 110 NVETFCIIMRKYARSQKVKEAVYTFNIMEKYDVPPNLAAFNSLLSALCK----------S 159
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + A+++F+ M+ + I PD ++SI+L + +A + + M + G P + TY
Sbjct: 160 KNVVKAQEIFNGMKDQFI-PDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTY 218
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+V LC GR+++A ++ EM + P++ Y+ Y A+ + M+
Sbjct: 219 GIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMER 278
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL--------------------- 221
+++ ++ YN LIG F +N++ + N + +
Sbjct: 279 NEI-EADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTD 337
Query: 222 -------------GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
D D+YTM+I CE K + A + + M K +P TF L
Sbjct: 338 EAFRVFRRMIKVCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLIN 397
Query: 269 GLIQSD-----MLRTWRRLKKKLDEESITFG 294
GL + + ++K + S+TFG
Sbjct: 398 GLCKKGNASKACILLEEMIEKGIRPSSVTFG 428
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 141/263 (53%), Gaps = 12/263 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ YT+L+ WC + A R EM+E G++P+VV +N ++ G+ R +R
Sbjct: 322 PDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLR------GQRR 375
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + K+F+ M+ +G P+V ++++++ + + K +++ M++ G P VAT
Sbjct: 376 PEAV----KMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVAT 431
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + R++ LL EM + G P TYN K R + A ++Y++M
Sbjct: 432 YTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMI 491
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVR-EIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L P IHTYN+++ + R M+ +W + + D++SYT+ I+G +
Sbjct: 492 KKGL-EPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGR 550
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
+EAC+Y EMI+KG+ ++ +
Sbjct: 551 PEEACKYIEEMIQKGMKTPQIDY 573
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 4/242 (1%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
I+NA VF+ MR G + V SF+ +L ++ + + + M+++ P + +YT+
Sbjct: 271 IKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTA 329
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMKED 183
++ C+ + +A + EM+ NG+ P +N + RG++ A+K++ MK
Sbjct: 330 LMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPE-AVKMFELMKAK 388
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
PN+ TY +LI +MDM + ++ D+ +YT L+ G ++
Sbjct: 389 GP-APNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDR 447
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFK 303
EM +KG P T+ L + L +M R+ KK+ ++ + N K
Sbjct: 448 VTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMK 507
Query: 304 PY 305
Y
Sbjct: 508 SY 509
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT L+ G+ R+D L EM ++G P+ TYN L+ + R
Sbjct: 427 PDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNR--------- 477
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP-QLSLDKLNFMKEKGICPTVA 120
+A +++ +M +G+EP + ++++++ Y + + M KGICP V
Sbjct: 478 -NMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVN 536
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
+YT + GR E+A + + EM++ G+ YN F ++
Sbjct: 537 SYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADF 580
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 125/268 (46%), Gaps = 11/268 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +LI G C +D A LGEM GV PNV+ Y+ LL G CR + R++
Sbjct: 149 DVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCR------SGRWQ 202
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ KVF+EM G+EPDV F+ + + + ++ + M ++G+ P V TY
Sbjct: 203 ----DVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTY 258
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ CLC G + +A L EM GV+P TYN G + +GAM L +M +
Sbjct: 259 NVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQ 318
Query: 183 DDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D V P++ T+N +I + RM + + +L +Y LI G K
Sbjct: 319 GDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKV 378
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
A E+I GL P T+ L G
Sbjct: 379 NMAMNLMSELISSGLEPDSFTYSILING 406
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 144/321 (44%), Gaps = 47/321 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V M+T I CK RI A + M++RG+EPNVVTYNVL+N +C+
Sbjct: 218 PDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCK---------- 267
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG--ICPTV 119
E ++R A + +EM +G+ PDV +++ ++ S + ++ L M + + P V
Sbjct: 268 EGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDV 327
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+ SV+ LC GR+ A + M G + TYN + N AM L +
Sbjct: 328 VTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSE 387
Query: 180 MKEDDLCVPNIHTYNILIGMFMAL---NRMDM-VREIWNHVKGSEL-------------- 221
+ L P+ TY+ILI F L +R +M +R + +EL
Sbjct: 388 LISSGL-EPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLG 446
Query: 222 ----------------GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
GLD +Y+ +++G C+ K A Q +M+++GL P VT+
Sbjct: 447 MMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSI 506
Query: 266 LYRGLIQSDMLRTWRRLKKKL 286
L + L R+ K++
Sbjct: 507 LINMFAKLGDLEEAERVLKQM 527
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 117/267 (43%), Gaps = 12/267 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + S+I+G CKI R+ A M ERG N+VTYN L+ G R +H
Sbjct: 325 PDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLR---VH----- 376
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + E+ G+EPD ++SI+++ +S+ + + L M ++GI +
Sbjct: 377 --KVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFH 434
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G +E A L EM N A Y+ D A +L + M
Sbjct: 435 YIPLLAALCQLGMMEQAMVLFNEMDMN-CGLDAVAYSTMMYGACKSGDIKAAKQLLQDML 493
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ L P+ TY+ILI MF L ++ + + S D+ + LI G + +
Sbjct: 494 DEGL-APDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQI 552
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYR 268
+ EM K + TL R
Sbjct: 553 NKILDLIHEMRAKNVAIDPKFICTLVR 579
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 110/236 (46%), Gaps = 13/236 (5%)
Query: 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG---IEPDVTSFSIVLHVY 94
+ V+YN++L +CRR +R A + +M P+ S+++V+
Sbjct: 75 DAVSYNIVLAALCRRGG---------DLRQALSLLADMSREAHPAARPNAVSYTMVMRGL 125
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ + ++ L M+ G+ V TY ++++ LC ++ A ELLGEM +GV P+
Sbjct: 126 CASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNV 185
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
Y+C + Y K++ +M + P++ + I R+ ++ +
Sbjct: 186 IVYSCLLRGYCRSGRWQDVSKVFEEMSRLGV-EPDVIMFTGFIDDLCKKGRIGKAVKVKD 244
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ L ++ +Y +LI+ LC++ +EA EM +KG+ P VT+ TL GL
Sbjct: 245 IMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGL 300
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 111/224 (49%), Gaps = 12/224 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
M N+ Y LI G+ ++++++MA + E+I G+EP+ TY++L+NG + + E
Sbjct: 359 MCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEM 418
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F +T M RGI ++ + +L + + ++ N M VA
Sbjct: 419 FLRT----------MTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVA 468
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y++++ C G I+ A++LL +M+ G++P A TY+ + D A ++ +QM
Sbjct: 469 -YSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQM 527
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
VP++ ++ LI + A +++ + ++ + ++ + +D
Sbjct: 528 AASGF-VPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAID 570
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 145/279 (51%), Gaps = 17/279 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ YT+L+ WC + A R EM+E G++P+VV +N ++ G+ R +R
Sbjct: 322 PDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLR------GQRR 375
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + K+F+ M+ +G P+V ++++++ + + K +++ M++ G P VAT
Sbjct: 376 PEAV----KMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVAT 431
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + R++ LL EM + G P TYN K R + A ++Y++M
Sbjct: 432 YTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMI 491
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVR-EIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L P IHTYN+++ + R M+ +W + + D++SYT+ I+G +
Sbjct: 492 KKGL-EPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGR 550
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 279
+EAC+Y EMI+KG+ ++ + +D + W
Sbjct: 551 PEEACKYIEEMIQKGMKTPQIDYNKF-----AADFSKGW 584
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 4/242 (1%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
I+NA VF+ MR G + V SF+ +L ++ + + + M+++ P + +YT+
Sbjct: 271 IKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTA 329
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMKED 183
++ C+ + +A + EM+ NG+ P +N + RG++ A+K++ MK
Sbjct: 330 LMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPE-AVKMFELMKAK 388
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
PN+ TY +LI +MDM + ++ D+ +YT L+ G ++
Sbjct: 389 GP-APNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDR 447
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFK 303
EM +KG P T+ L + L +M R+ KK+ ++ + N K
Sbjct: 448 VTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMK 507
Query: 304 PY 305
Y
Sbjct: 508 SY 509
>gi|15239018|ref|NP_196692.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174149|sp|Q9LFM6.1|PP375_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g11310, mitochondrial; Flags: Precursor
gi|8953393|emb|CAB96666.1| putative protein [Arabidopsis thaliana]
gi|110738090|dbj|BAF00978.1| hypothetical protein [Arabidopsis thaliana]
gi|332004275|gb|AED91658.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 144/284 (50%), Gaps = 15/284 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V+++ L+ GW + ++ AE+ EM V+P VVTY L+ G CR
Sbjct: 247 VPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRM-------- 298
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN--FMKEKGICPT 118
+ ++ A +V +EM++ +E + F+ ++ A + +L + F+ E G PT
Sbjct: 299 --RRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESG--PT 354
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ TY S+VK C G + A ++L M+ GV P+ TYN FFK + M LY
Sbjct: 355 IVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYF 414
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
++ E P+ TY++++ M ++ + ++ +K + DL + TMLIH LC
Sbjct: 415 KLIEAGHS-PDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRL 473
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ +EA + F + +G++PQ +TF+ + GL M +RL
Sbjct: 474 EMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSR-AHKPQL--SLDKLNFMKEKGICPTVATYTSV 125
E DE GIEP V +V ++ R + P L S+ K MK G + + + SV
Sbjct: 89 ESALDET---GIEPSV---ELVHALFDRLSSSPMLLHSVFKWAEMK-PGFTLSPSLFDSV 141
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSP---SAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
V LC E A L+ + VR+ SA+T+ + Y A++ + +
Sbjct: 142 VNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARS 201
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--------YTMLIHG 234
+ + +L + AL + VRE +++ +G +DS + +L++G
Sbjct: 202 YEPVCKSATELRLLEVLLDALCKEGHVREASMYLE--RIGGTMDSNWVPSVRIFNILLNG 259
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+K K+A + + EM + P VT+ TL G
Sbjct: 260 WFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEG 294
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 148/291 (50%), Gaps = 12/291 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y +LI G CK +++ AE L EM +GV+ N+V +N ++G CRR + R
Sbjct: 354 VPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALR 413
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ M +GI DV +++I+ + + H+ + LN M EKG+ P V
Sbjct: 414 LQAI----------MEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVV 463
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T ++ C G + +AE L +M + G P+ TYN Y ++ A K+ +M
Sbjct: 464 TFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEM 523
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L +P+++TY+ LI + R+D +++N ++ + ++ +YT +I GL ++ +
Sbjct: 524 INKGL-LPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGR 582
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EA + + EM++ GL+P F +L G + ++K D +S+
Sbjct: 583 ADEAFKLYDEMMKIGLIPDDRVFTSLV-GSFHKPLTHAGLDIQKASDSDSV 632
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 143/309 (46%), Gaps = 27/309 (8%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNERFE 62
V+ T +I C+ ++ A+ + EM+ +G V+PNV TYN LLN R +
Sbjct: 216 VQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEIL 275
Query: 63 K-------------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
K I AEK+F+EMR + IE DV +S ++ R
Sbjct: 276 KLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRL 335
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ + + M ++ I P TY +++ +C G++E AE LL EM GV + +
Sbjct: 336 GNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIF 395
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
N Y R + A++L M++ + ++ TYNIL L+R D + I N +
Sbjct: 396 NTTMDGYCRRGKMDEALRLQAIMEKKGIN-ADVFTYNILANGLCKLHRYDEAKCILNSMV 454
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+ ++ ++TM I C++ EA + F +M +KG +P +T+ TL + + ++
Sbjct: 455 EKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVK 514
Query: 278 TWRRLKKKL 286
++K ++
Sbjct: 515 QAHKIKSEM 523
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 12/250 (4%)
Query: 58 NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
N F++TIR V+D + +G+ + S ++L R + + + M E
Sbjct: 158 NRLFDETIR----VYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFE 213
Query: 118 T-VATYTSVVKCLCSCGRIEDAEELLGEMVRNG-VSPSAETYNCFFKEYRGRKDANGAMK 175
V + T V+ LC G +E A+EL+ EMV G V P+ TYN Y GRKD G +
Sbjct: 214 IRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDE 273
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
+ + M+++ + V ++ TY+ILI + + ++ +I+ ++ + +D+ Y+ +I
Sbjct: 274 ILKLMEKEQV-VFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWS 332
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEES 290
K A F EM ++ ++P T+ L G+ ++ + L K +D
Sbjct: 333 RRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNL 392
Query: 291 ITFGSEFQNY 300
+ F + Y
Sbjct: 393 VIFNTTMDGY 402
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 122/285 (42%), Gaps = 50/285 (17%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
L+ + +D RF M+E E V + ++++ +CRR + A
Sbjct: 186 LLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGE----------VEKA 235
Query: 69 EKVFDEMRVRGI-EPDVTSFSIVLHVYSRAHKPQLSLDK-LNFMKEKGICPTVATYTSVV 126
+++ DEM +GI +P+V +++ +L+ Y K + +D+ L M+++ + +VATY+ ++
Sbjct: 236 KELMDEMVGKGIVKPNVFTYNTLLNAYV-GRKDRKGVDEILKLMEKEQVVFSVATYSILI 294
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ S G IE+AE++ EM + Y+ R + A L+ +M + D+
Sbjct: 295 QWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDI- 353
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VPN HTY LI G+C+ + + A
Sbjct: 354 VPNAHTYG-----------------------------------ALIGGVCKAGQMEAAEI 378
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+EM KG+ V F T G + + RL+ ++++ I
Sbjct: 379 LLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGI 423
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 149/296 (50%), Gaps = 16/296 (5%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI G+CK+ R++ A ++ + I G EP+ VTYN ++G+C+ + +A
Sbjct: 273 LINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGH----------VSHAL 322
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
KV D M G +PDV +++ V++ S+ + + +N M ++G P T+ +++ L
Sbjct: 323 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 382
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
S R+E+A +L E+ G+SP T+N D + ++L+ +MK C P+
Sbjct: 383 SSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG-CTPD 441
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
TYNILI ++ ++ ++ N ++ + +Y +I LC+K + +EA + F
Sbjct: 442 EVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFD 501
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNY 300
+M +G+ VTF TL GL ++ + L K+ L +IT+ S +Y
Sbjct: 502 QMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHY 557
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 13/289 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + +LI NR++ A E+ +G+ P+V T+N+L+N +C+ H R
Sbjct: 369 LPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 428
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP-TV 119
F+EM+ G PD +++I++ K +LD LN M+ G CP +
Sbjct: 429 L----------FEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG-CPRST 477
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY +++ LC RIE+AEE+ +M G+S SA T+N K + A +L Q
Sbjct: 478 VTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQ 537
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M ++ L PN TYN ++ + + +I + + +D+ +Y LI+GLC+
Sbjct: 538 MVKEGL-QPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAG 596
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ + A + M KG+ P + + + L + + LR L +++ E
Sbjct: 597 RTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTE 645
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 126/278 (45%), Gaps = 18/278 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI C + ++ A L EM G + VTYN +++ +C++
Sbjct: 440 PDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMR------- 492
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I AE+VFD+M +GI +F+ ++ +A + + + + M ++G+ P T
Sbjct: 493 ---IEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNIT 549
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C G I+ A ++L M NG TY A+KL R M+
Sbjct: 550 YNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 609
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG-SELGLDLDS--YTMLIHGLCEK 238
+ P YN +I +L R + +R+ N + +E+G D+ Y ++ LC
Sbjct: 610 IKGI-RPTPKAYNPVI---QSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRG 665
Query: 239 Q-KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
KEA + VEM+ KG +P+ +F L GL+ M
Sbjct: 666 GGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGM 703
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 128/284 (45%), Gaps = 20/284 (7%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIER---GVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
S + + ++ R D A + ++ GV+ + V +N LLN + + L
Sbjct: 129 SFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKL---------- 178
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+ E V++EM RGI+PDV + + ++ RAH+ + ++ L M G+ P T+T++
Sbjct: 179 KLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTL 238
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGR-KDANGAMKLYRQMKE 182
++ G IE A + +M+ G SP+ T N Y GR +DA G Y Q +
Sbjct: 239 MQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALG----YIQQEI 294
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D P+ TYN + + ++ + + D+ +Y +I+ L + +
Sbjct: 295 ADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELD 354
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EA +M+++G LP TF TL L + L L ++L
Sbjct: 355 EAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAREL 398
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 3/192 (1%)
Query: 100 PQLSLDKLN-FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
P+ +L LN + + P+ A Y +V+ L + G + E L+ EM R G A
Sbjct: 69 PEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVR 128
Query: 159 CFFKEY-RGRKDANGAMKLYRQMKEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHV 216
F + Y R R+ + + Q+ D V + +N L+ + + +++ ++ ++N +
Sbjct: 129 SFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEM 188
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
G + D+ + LI LC + + A EM G+ P + TF TL +G I+ +
Sbjct: 189 TGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSI 248
Query: 277 RTWRRLKKKLDE 288
R+K K+ E
Sbjct: 249 EAALRVKAKMME 260
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 137/298 (45%), Gaps = 26/298 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
P+V Y+ L+ G+C + +++ A L EM+ + P++ TY +L++ +C+ + E
Sbjct: 231 PDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENV 290
Query: 61 ------------------------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ NA++VF M G+ PDV +SI+++ +
Sbjct: 291 LAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCK 350
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +L+ + +K + P TYTS++ CLC GRI +L EM+ G P T
Sbjct: 351 IKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVIT 410
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + A+ L+ +MK D PN++T+ IL+ + R+ E + +
Sbjct: 411 YNNLIDALCKNGHLDRAIALFNKMK-DQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDL 469
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
L++ +YT++I+GLC++ EA M + G + VTFE + R D
Sbjct: 470 LTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKD 527
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 150/315 (47%), Gaps = 26/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PN +L+ G C ++ A RF +++ +G + ++Y +L+NGVC+
Sbjct: 126 PNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRL 185
Query: 52 -----RASLHPN--------ERF--EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R S+ PN +R + + A ++ EM +GI PDV ++SI++ +
Sbjct: 186 LRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCI 245
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ ++D LN M + I P + TYT +V LC G++++AE +L MV+ V+
Sbjct: 246 VGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVV 305
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ Y + N A +++ M + + P++H Y+I+I + R+D ++ +
Sbjct: 306 YSTLMDGYCLVNEVNNAKRVFYTMTQMGV-TPDVHCYSIMINGLCKIKRVDEALNLFEEI 364
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ D +YT LI LC+ + F EM+++G P +T+ L L ++ L
Sbjct: 365 HQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHL 424
Query: 277 RTWRRLKKKLDEESI 291
L K+ +++I
Sbjct: 425 DRAIALFNKMKDQAI 439
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 130/276 (47%), Gaps = 11/276 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y+ +I CK +D A EM+ +G+ P+VVTY++L++G C L+
Sbjct: 196 PNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLN----- 250
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +EM + I PD+ +++I++ + K + + + L M + + V
Sbjct: 251 -----RAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVV 305
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C + +A+ + M + GV+P Y+ K + A+ L+ ++
Sbjct: 306 YSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIH 365
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ VP+ TY LI R+ V ++++ + D+ +Y LI LC+
Sbjct: 366 QKNM-VPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHL 424
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
A F +M ++ + P TF L GL + L+
Sbjct: 425 DRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLK 460
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YTSLI CK RI EM++RG P+V+TYN L++ +C+ L
Sbjct: 370 VPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLD---- 425
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +F++M+ + I P+V +F+I+L + + + +L+ + KG C V
Sbjct: 426 ------RAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVR 479
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ LC G +++A L M NG A T+ + + + + + A KL R+M
Sbjct: 480 TYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREM 539
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 147/322 (45%), Gaps = 47/322 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +I +C ++ +A + ++++ G +PN +T N L+ G+C
Sbjct: 91 PDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLC----------L 140
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ A + D++ +G S+ I+++ + + + ++ L ++ I P V
Sbjct: 141 EGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVI 200
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ LC +++A +L EMV G+SP TY+ + N A+ L +M
Sbjct: 201 YSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMV 260
Query: 182 EDDLCVPNIHTYNILIG-----------------MFMALNRMD------------MVREI 212
+++ P+I+TY IL+ M A +D +V E+
Sbjct: 261 LENI-NPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEV 319
Query: 213 WNHVK----GSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
N + +++G+ D+ Y+++I+GLC+ ++ EA F E+ +K ++P VT+ +L
Sbjct: 320 NNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSL 379
Query: 267 YRGLIQSDMLR-TWRRLKKKLD 287
L +S + W + LD
Sbjct: 380 IDCLCKSGRISYVWDLFDEMLD 401
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 94/203 (46%), Gaps = 1/203 (0%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A ++ +M + +EPD + +I+++ + + L+ ++ + + G P T +++K
Sbjct: 77 AISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMK 136
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
LC G++++A +++ G S +Y + A++L R+++ +
Sbjct: 137 GLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSI-R 195
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
PN+ Y+++I +D +++ + G + D+ +Y++L+ G C + A
Sbjct: 196 PNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDL 255
Query: 248 FVEMIEKGLLPQKVTFETLYRGL 270
EM+ + + P T+ L L
Sbjct: 256 LNEMVLENINPDIYTYTILVDAL 278
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 137/306 (44%), Gaps = 47/306 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+ LI G+CKI+ + AE+ +MI+ PNV TYN LNG+ R+
Sbjct: 479 VPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGR------ 532
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS------RAH---------------- 98
I +A+ V++EM G PDV ++S ++H +S +AH
Sbjct: 533 ----IADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAV 588
Query: 99 -------------KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
KP + + M E+G P TYT+++ C+ G+IE A E+ EM
Sbjct: 589 TYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEM 648
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
V G P YNC K + R G K Q+ C P+ ++NI+I R
Sbjct: 649 VSKGHDPDVVAYNCLLKGFF-RAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKR 707
Query: 206 MDMVREIWNHVKGSE-LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+D E++ ++ DL +Y LI GLC +Q+ EA + F E+ L P F
Sbjct: 708 LDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFN 767
Query: 265 TLYRGL 270
L +
Sbjct: 768 VLLEAI 773
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 142/350 (40%), Gaps = 64/350 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEM-IERGVEPNVVTYNVLLNGVCRRA----SLH 56
P+ +Y+ ++ CK+ +D A + EM +E N V + L+G+C+ +
Sbjct: 267 PDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFE 326
Query: 57 PNERFEKTIRNAEKVFD--------------------EMRVRGIEPDVTSFSIVLHVYSR 96
++++ +++ V+D E+ R I+P + V+ +
Sbjct: 327 ACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCK 386
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN-------- 148
A + +L L M ++G CP +AT++ ++ LC +I++A+E L M R
Sbjct: 387 AGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSC 446
Query: 149 ------------------------------GVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
P +Y+ + + A KLY+
Sbjct: 447 FSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYK 506
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
QM + + CVPN+ TYN + M R+ + ++ + + D+ +Y+ LIHG
Sbjct: 507 QMIDLN-CVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLA 565
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+K +A + F MI +G P VT+ L GL + L +K+ E
Sbjct: 566 RKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 615
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 114/290 (39%), Gaps = 17/290 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y L+ C D A RF GEM+++G +P+ Y + C +A+ E
Sbjct: 161 VPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTE--CLKATGKEGEF 218
Query: 61 FEKTIRNAEK-VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL-NFMKEKGICPT 118
R+ EK V EM ++ + + +F I + KL M + G P
Sbjct: 219 SRVFGRDLEKRVAVEMMLK--KALLVNFVI--------QDKAIEASKLFRAMVKSGCKPD 268
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP-SAETYNCFFKEYRGRKDANGAMKLY 177
Y+ +V C +++A +L EM +P + + F A +
Sbjct: 269 ATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEAC 328
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
R M+E + Y++LI + + R+D E + G + + +I LC+
Sbjct: 329 RTMQES--LSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCK 386
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+ A MI++G P T L L ++D ++ + + +D
Sbjct: 387 AGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMD 436
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 94/238 (39%), Gaps = 38/238 (15%)
Query: 72 FDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCS 131
F ++ R + DV +++ +L R + + M +G+ P TY +V+ C
Sbjct: 117 FRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCY 176
Query: 132 CGRIEDAEELLGEMVRNGVSPSAETYN----CF--------FKEYRGR------------ 167
++A GEMV G PS+ Y C F GR
Sbjct: 177 ERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMML 236
Query: 168 -----------KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
A A KL+R M + C P+ Y+ ++ L +D +++ +
Sbjct: 237 KKALLVNFVIQDKAIEASKLFRAMVKSG-CKPDATIYSYMVLAHCKLENLDEAFKLFLEM 295
Query: 217 K-GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
S+ L+ ++T + GLC+ K ++A + +++ L + ++ L R LI+S
Sbjct: 296 AVESKAPLNNVAWTAFLSGLCKSGKIEQAFEA-CRTMQESLSSSQPVYDMLIRLLIES 352
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 143/283 (50%), Gaps = 11/283 (3%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
SL+ G K+ +D+A E++ GV+ NV T N+++N +C+ + I N
Sbjct: 67 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKN----------QKIENT 116
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
+ +M +G+ PDV +++ +++ Y R + + + ++ M KG+ P V TY +++
Sbjct: 117 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 176
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC G+ A+ +L EM++ G+SP TYN E + A +++ +M + VP
Sbjct: 177 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGV-VP 235
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
++ +++ LIG+ +D + + +K + L D YT+LI G C EA +
Sbjct: 236 DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVR 295
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM+E+G + VT+ T+ GL + ML L ++ E +
Sbjct: 296 DEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 338
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 137/303 (45%), Gaps = 46/303 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y ++I G CK + A+ L EM++ G+ P+ TYN+LL CR ++
Sbjct: 165 PCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMM----- 219
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP---- 117
+AE++FDEM +G+ PD+ SFS ++ + S+ +L MK G+ P
Sbjct: 220 -----DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 274
Query: 118 -------------------------------TVATYTSVVKCLCSCGRIEDAEELLGEMV 146
V TY +++ LC + +A+EL EM
Sbjct: 275 YTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMT 334
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
GV P T+ Y + N A+ L+ M + +L P++ TYN LI F + M
Sbjct: 335 ERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL-KPDVVTYNTLIDGFCKGSEM 393
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ V E+WN + + + SY +LI+G C EA + + EM+EKG +T T+
Sbjct: 394 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 453
Query: 267 YRG 269
+G
Sbjct: 454 VKG 456
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 147/319 (46%), Gaps = 44/319 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YT LI G+C+ + A + EM+E+G +VVTYN +LNG+C+
Sbjct: 270 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK---------- 319
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + A+++F EM RG+ PD +F+ +++ YS+ ++ M ++ + P V T
Sbjct: 320 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 379
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +E EL +M+ + P+ +Y Y + A +L+ +M
Sbjct: 380 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 439
Query: 182 EDDL----------------------------------CVPNIHTYNILIGMFMALNRMD 207
E VP+ TYN LI F+ MD
Sbjct: 440 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMD 499
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ N ++ S L D+ +Y ++++G + + +EA ++MIE+G+ P + T+ +L
Sbjct: 500 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 559
Query: 268 RGLIQSDMLRTWRRLKKKL 286
G + + L+ R+ ++
Sbjct: 560 NGHVTQNNLKEAFRVHDEM 578
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 125/258 (48%), Gaps = 11/258 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI G+ K ++ A MI+R ++P+VVTYN L++G C+ + +
Sbjct: 340 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK---- 395
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+++++M R I P+ S+ I+++ Y + + M EKG T+ T
Sbjct: 396 ------VNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 449
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++VK C G A+E L M+ G+ P TYN + ++ + A L +M+
Sbjct: 450 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME 509
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L +P++ TYN+++ F RM I + + D +YT LI+G +
Sbjct: 510 NSGL-LPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL 568
Query: 242 KEACQYFVEMIEKGLLPQ 259
KEA + EM+++G +P
Sbjct: 569 KEAFRVHDEMLQRGFVPD 586
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 1/206 (0%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F +++ Y +A K + + +K KG+C ++ S++ L G ++ A E+ E+V
Sbjct: 30 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 89
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
R+GV + T N + M+E + P++ TYN LI + +
Sbjct: 90 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGV-FPDVVTYNTLINAYCRQGLL 148
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ E+ + + G L + +Y +I+GLC+ K+ A EM++ G+ P T+ L
Sbjct: 149 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 208
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESIT 292
++D + R+ ++ + +
Sbjct: 209 LVECCRNDNMMDAERIFDEMPSQGVV 234
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +LI G+ K +D A + +M G+ P+V+TYNV+LNG R+ +
Sbjct: 479 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQE--- 535
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
AE + +M RG+ PD ++++ +++ + + + + + M ++G P
Sbjct: 536 -------AELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 585
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y ++ G+ + R+ AE + +MIERGV P+ TY L+NG + +L
Sbjct: 514 LPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL----- 568
Query: 61 FEKTIRNAEKVFDEMRVRGIEPD 83
+ A +V DEM RG PD
Sbjct: 569 -----KEAFRVHDEMLQRGFVPD 586
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 143/283 (50%), Gaps = 11/283 (3%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
SL+ G K+ +D+A E++ GV+ NV T N+++N +C+ + I N
Sbjct: 224 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCK----------NQKIENT 273
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
+ +M +G+ PDV +++ +++ Y R + + + ++ M KG+ P V TY +++
Sbjct: 274 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 333
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC G+ A+ +L EM++ G+SP TYN E + A +++ +M + VP
Sbjct: 334 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGV-VP 392
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
++ +++ LIG+ +D + + +K + L D YT+LI G C EA +
Sbjct: 393 DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVR 452
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM+E+G + VT+ T+ GL + ML L ++ E +
Sbjct: 453 DEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 495
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 137/303 (45%), Gaps = 46/303 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y ++I G CK + A+ L EM++ G+ P+ TYN+LL CR ++
Sbjct: 322 PCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMM----- 376
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP---- 117
+AE++FDEM +G+ PD+ SFS ++ + S+ +L MK G+ P
Sbjct: 377 -----DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 431
Query: 118 -------------------------------TVATYTSVVKCLCSCGRIEDAEELLGEMV 146
V TY +++ LC + +A+EL EM
Sbjct: 432 YTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMT 491
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
GV P T+ Y + N A+ L+ M + +L P++ TYN LI F + M
Sbjct: 492 ERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL-KPDVVTYNTLIDGFCKGSEM 550
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ V E+WN + + + SY +LI+G C EA + + EM+EKG +T T+
Sbjct: 551 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 610
Query: 267 YRG 269
+G
Sbjct: 611 VKG 613
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 147/319 (46%), Gaps = 44/319 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YT LI G+C+ + A + EM+E+G +VVTYN +LNG+C+
Sbjct: 427 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK---------- 476
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + A+++F EM RG+ PD +F+ +++ YS+ ++ M ++ + P V T
Sbjct: 477 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 536
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +E EL +M+ + P+ +Y Y + A +L+ +M
Sbjct: 537 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 596
Query: 182 EDDL----------------------------------CVPNIHTYNILIGMFMALNRMD 207
E VP+ TYN LI F+ MD
Sbjct: 597 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMD 656
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ N ++ S L D+ +Y ++++G + + +EA ++MIE+G+ P + T+ +L
Sbjct: 657 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 716
Query: 268 RGLIQSDMLRTWRRLKKKL 286
G + + L+ R+ ++
Sbjct: 717 NGHVTQNNLKEAFRVHDEM 735
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 11/257 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI G+ K ++ A MI+R ++P+VVTYN L++G C+ + +
Sbjct: 497 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK---- 552
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+++++M R I P+ S+ I+++ Y + + M EKG T+ T
Sbjct: 553 ------VNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 606
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++VK C G A+E L M+ G+ P TYN + ++ + A L +M+
Sbjct: 607 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME 666
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L +P++ TYN+++ F RM I + + D +YT LI+G +
Sbjct: 667 NSGL-LPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL 725
Query: 242 KEACQYFVEMIEKGLLP 258
KEA + EM+++G +P
Sbjct: 726 KEAFRVHDEMLQRGFVP 742
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 1/205 (0%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F +++ Y +A K + + +K KG+C ++ S++ L G ++ A E+ E+V
Sbjct: 187 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 246
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
R+GV + T N + M+E + P++ TYN LI + +
Sbjct: 247 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGV-FPDVVTYNTLINAYCRQGLL 305
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ E+ + + G L + +Y +I+GLC+ K+ A EM++ G+ P T+ L
Sbjct: 306 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 365
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESI 291
++D + R+ ++ + +
Sbjct: 366 LVECCRNDNMMDAERIFDEMPSQGV 390
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +LI G+ K +D A + +M G+ P+V+TYNV+LNG R+ +
Sbjct: 636 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQ---- 691
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
AE + +M RG+ PD ++++ +++ + + + + + M ++G P
Sbjct: 692 ------EAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y ++ G+ + R+ AE + +MIERGV P+ TY L+NG + +L
Sbjct: 671 LPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL----- 725
Query: 61 FEKTIRNAEKVFDEMRVRGIEPD 83
+ A +V DEM RG PD
Sbjct: 726 -----KEAFRVHDEMLQRGFVPD 743
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 138/268 (51%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV+ YT LI+G CK +++ A M+E G+EPNVVTY L+ G C
Sbjct: 245 PNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN---------- 294
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ A ++ M G+ P+ +FS+++ + K + + L + +KG+
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ LC G+I+ A+EL+ +M+ G P A +Y+ +K + A + M
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + + TY I+I + + ++I++ + + + D+ +YT+ + CE+ +
Sbjct: 415 EKGIQASPV-TYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRM 473
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
++A V+M+++G+ P VT+ TL RG
Sbjct: 474 EDAESMIVQMVDRGVFPNLVTYNTLIRG 501
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 130/271 (47%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +Y ++++G C+ R + AE L E + G EPN+V YN L++G C +
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEM------ 228
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A KVF+ M P+V +++ ++H ++ K + ++ + M E G+ P V T
Sbjct: 229 ----EHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++++ C+ G ++ A LL M NG+ P+ T++ R+ A +
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLV 344
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + V + Y LI ++D E+ + D SY+ LI GLC ++K
Sbjct: 345 KKGVKVNEV-VYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKL 403
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+A +M+EKG+ VT+ + L++
Sbjct: 404 SQATLMLEDMMEKGIQASPVTYTIIIDELVR 434
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 127/290 (43%), Gaps = 35/290 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN ++ LI CK +++ A+ FLG ++++GV+ N V Y L++G+C+ + +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373
Query: 61 F-------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+K + A + ++M +GI+ +++I++
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433
Query: 96 R---AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
R + P+ DK M GI P + TYT V+ C GR+EDAE ++ +MV GV P
Sbjct: 434 REVGSEGPKKIFDK---MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
+ TYN + Y + A + M PN +Y +L+ + + + D +I
Sbjct: 491 NLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGW-KPNEDSYTVLLRLVVKKSSSDNSVDI 549
Query: 213 WNHVKGSEL---GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
W +L D + +LI+GL +K E M E G P
Sbjct: 550 WKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS 599
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 23/297 (7%)
Query: 1 MP--NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
MP N++ YT+LI +C I A++ L ++ G+ P+ Y + G CR L
Sbjct: 67 MPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGML--- 123
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+A +VF M +RG +++ +LH A + ++ M+ P
Sbjct: 124 -------THACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
Y ++V LC GR E+AE LL E + NG P+ YN Y + A+K++
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M + + C PN+ TY LI +++ +++ + + L ++ +YT LI G C +
Sbjct: 237 GM-DGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
+ A + M GL+P TF L L + ++K++E + GS
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK----------REKVEEAQLFLGS 342
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 130/315 (41%), Gaps = 26/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
P+ YTS + G+C+ + A R M RG TY LL+G+
Sbjct: 105 PDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAV 164
Query: 51 ----RRASLHPNERFEKTIRNA----------EKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R S P+ T+ + E + +E G EP++ ++ ++ Y
Sbjct: 165 FVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCN 224
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + +L M P V TYT ++ LC G++E A L MV G+ P+ T
Sbjct: 225 AGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + A +L M+ + L VPN T+++LI +++ + +
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGL-VPNDWTFSVLIDALCKREKVEEAQLFLGSL 343
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ ++ YT LI GLC+ K A + +MI +G +P ++ +L GL + L
Sbjct: 344 VKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKL 403
Query: 277 RTWRRLKKKLDEESI 291
+ + + E+ I
Sbjct: 404 SQATLMLEDMMEKGI 418
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 138/268 (51%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV+ YT LI+G CK +++ A M+E G+EPNVVTY L+ G C
Sbjct: 245 PNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN---------- 294
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ A ++ M G+ P+ +FS+++ + K + + L + +KG+
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ LC G+I+ A+EL+ +M+ G P A +Y+ +K + A + M
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + + TY I+I + + ++I++ + + + D+ +YT+ + CE+ +
Sbjct: 415 EKGIQASPV-TYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRM 473
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
++A V+M+++G+ P VT+ TL RG
Sbjct: 474 EDAESMIVQMVDRGVFPNLVTYNTLIRG 501
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 134/306 (43%), Gaps = 44/306 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN ++ LI CK +++ A+ FLG ++++GV+ N V Y L++G+C+ + +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373
Query: 61 F-------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+K + A + ++M +GI+ +++I++
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433
Query: 96 R---AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
R + P+ DK M GI P + TYT V+ C GR+EDAE ++ +MV GV P
Sbjct: 434 REVGSEGPKKIFDK---MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
+ TYN + Y + A + M PN +Y +L+ + + + D +I
Sbjct: 491 NLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGW-KPNEDSYTVLLRLVVKKSSSDNSVDI 549
Query: 213 WN------------HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
W + +L L D Y+ I LC + +EA +F+ M L P +
Sbjct: 550 WKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSE 609
Query: 261 VTFETL 266
+ ++
Sbjct: 610 DVYTSI 615
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 142/316 (44%), Gaps = 36/316 (11%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR-----ASLHP 57
N +YTSLI G CK +ID A+ + +MI G P+ +Y+ L++G+CR+ A+L
Sbjct: 351 NEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLML 410
Query: 58 NERFEKTIRNA--------------------EKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+ EK I+ + +K+FD+M GI PD+ ++++ + Y
Sbjct: 411 EDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEE 470
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ + + + M ++G+ P + TY ++++ + G + A MV G P+ ++Y
Sbjct: 471 GRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSY 530
Query: 158 NCFFKEYRGRKDANGAMKLYR--QMKEDDLCVPNI---------HTYNILIGMFMALNRM 206
+ + ++ ++ +++ MK+ + + +I Y+ I ++R+
Sbjct: 531 TVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRL 590
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + + ++ + L D YT +I C + +A M + G LP ++ +
Sbjct: 591 EEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRII 650
Query: 267 YRGLIQSDMLRTWRRL 282
L + RT + +
Sbjct: 651 ISSLCEGGNFRTAKEV 666
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 23/297 (7%)
Query: 1 MP--NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
MP N++ YT+LI +C I A++ L ++ G+ P+ Y + G CR L
Sbjct: 67 MPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGML--- 123
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+A +VF M +RG +++ +LH A + ++ M+ P
Sbjct: 124 -------THACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
Y ++V LC GR E+AE LL E + NG P+ YN Y + A+K++
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M + + C PN+ TY LI +++ +++ + + L ++ +YT LI G C +
Sbjct: 237 GM-DGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
+ A + M GL+P TF L L + ++K++E + GS
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK----------REKVEEAQLFLGS 342
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 130/315 (41%), Gaps = 26/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
P+ YTS + G+C+ + A R M RG TY LL+G+
Sbjct: 105 PDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAV 164
Query: 51 ----RRASLHPNERFEKTIRNA----------EKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R S P+ T+ + E + +E G EP++ ++ ++ Y
Sbjct: 165 FVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCN 224
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + +L M P V TYT ++ LC G++E A L MV G+ P+ T
Sbjct: 225 AGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + A +L M+ + L VPN T+++LI +++ + +
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGL-VPNDWTFSVLIDALCKREKVEEAQLFLGSL 343
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ ++ YT LI GLC+ K A + +MI +G +P ++ +L GL + L
Sbjct: 344 VKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKL 403
Query: 277 RTWRRLKKKLDEESI 291
+ + + E+ I
Sbjct: 404 SQATLMLEDMMEKGI 418
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 23/270 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YT + +C+ R++ AE + +M++RGV PN+VTYN L+ G
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG-------- 506
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLD--KLNFMKEKGIC--- 116
+ A F+ M +G +P+ S++++L + + S+D K+ MK+ +
Sbjct: 507 --LVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLED 564
Query: 117 ------PTVA-TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
P A Y+ ++CLC R+E+A+ M ++PS + Y K
Sbjct: 565 ITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKI 624
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A+ L M + +P++ +Y I+I +E++ + E D +
Sbjct: 625 LTDALTLLDSMTKSGY-LPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWK 683
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+LI+GL +K E M E G P
Sbjct: 684 ILIYGLLQKGSVAEFSSLLSVMKEHGYQPS 713
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 146/291 (50%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ MY +LI G+C + ++D+A ++ +M++RG+ V TYN+L++ +
Sbjct: 217 PSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALF----------M 266
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A V +EM+ G PDV +++I+++ Y + + +L+ M +KG+ T T
Sbjct: 267 DARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVT 326
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ G++++ + L V+ G+ P YN + D A ++ +M+
Sbjct: 327 YTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEME 386
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+ TYN L+ F L R+D R + + + + DL SY LI G K
Sbjct: 387 KKRI-PPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDI 445
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
K+A + EM++KG P +T+ L +GL + L K++ + IT
Sbjct: 446 KDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGIT 496
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 139/309 (44%), Gaps = 18/309 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNER 60
PN Y ++I G+C R+ A + EM ERG + P+ TY L++G C+ +
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRME---- 200
Query: 61 FEKTIRNAEKVFDEMRVRG-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+A KVFDEM +G + P ++ ++ Y K ++L M ++GI TV
Sbjct: 201 ------DAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTV 254
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
ATY ++ L R DA +L EM +NG SP TYN Y + A++++ +
Sbjct: 255 ATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEE 314
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + + + TY LI +F ++ ++N + D+ Y LI+ C
Sbjct: 315 MSQKGVRATAV-TYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGG 373
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFG 294
+ A + EM +K + P +T+ TL RG L R L K+ + + +++
Sbjct: 374 DMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYN 433
Query: 295 SEFQNYHFK 303
+ Y K
Sbjct: 434 TLISGYSMK 442
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V MY +LI C ++ A + EM ++ + P+ +TYN L+ G C L
Sbjct: 357 PDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLD----- 411
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + DEM RGI+PD+ S++ ++ YS + +L + M +KG PT+ T
Sbjct: 412 -----EARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMT 466
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
Y ++++ LC + +DAE L+ EMV G++P TY
Sbjct: 467 YNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTY 502
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
+C T T+ +++ LC+ G+ A ELL +M R P+A TYN + R A+
Sbjct: 114 LCTT--TFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAAL 167
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRM-DMVREIWNHVKGSELGLDLDSYTMLIH 233
++ R+M+E P+ +TY LI + + RM D V+ + E+ Y LI
Sbjct: 168 EVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIG 227
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
G C+ K A QY +M+++G+ T+ L L
Sbjct: 228 GYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHAL 264
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV 49
P + Y +LI G CKI + D AE + EM+ +G+ P+ TY L+ G+
Sbjct: 462 PTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 150/297 (50%), Gaps = 19/297 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN YTSL+ G CK R+D A L EM+ +G+ PNVVTY V+++G+C+
Sbjct: 337 MPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCK--------- 387
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A+ V M G++ + ++ ++H + + + +LD LN MK KG+ V+
Sbjct: 388 -EGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVS 446
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE-YRGRKDANGAMKLYRQ 179
Y +++ LC ++++A+ LL +M G+ P+ Y ++ K++ L++
Sbjct: 447 LYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKI 506
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV-KGSELGLD--LDSYTMLIHGLC 236
+ D PN+ TY LI L + + E +H K ELGLD + +YT LI G C
Sbjct: 507 L--DSGFQPNVVTYCALID---GLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFC 561
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
+ +A EMI+KG+ KV + +L G ++ L+ LK K+ E +
Sbjct: 562 KIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQL 618
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y SLI G+ K ++ E+ + EM + G +VVTYN L+N + R
Sbjct: 233 PDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFG------RM 286
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK A F EM+ +G+ +V +FS + + + Q ++ M+ +G+ P T
Sbjct: 287 EK----AYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFT 342
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS+V C GR++DA LL EMV G+ P+ TY A + M+
Sbjct: 343 YTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLME 402
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + ++ G FM N + ++ N +K + LD+ Y LI GLC+ QK
Sbjct: 403 RGGVKANELLYTTLIHGHFMN-NNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKV 461
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA +M GL P V + T+ L ++
Sbjct: 462 DEAKSLLHKMAGCGLRPNTVIYTTIMDALFKA 493
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 133/271 (49%), Gaps = 11/271 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +LI + K R++ A + GEM +GV NVVT++ ++ C+ E
Sbjct: 269 DVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK----------E 318
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++ A K+F +MRVRG+ P+ +++ ++ +A + ++ L+ M +G+ P V TY
Sbjct: 319 GLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 378
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T +V LC G++ +A+ +L M R GV + Y + ++ A+ L QMK
Sbjct: 379 TVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKN 438
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ + ++ Y LI ++D + + + + G L + YT ++ L + K
Sbjct: 439 KGMEL-DVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKES 497
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA ++++ G P VT+ L GL ++
Sbjct: 498 EAVALLHKILDSGFQPNVVTYCALIDGLCKA 528
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 11/233 (4%)
Query: 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PNV T+N++++ +C+ E + A +F M+ G PDV +++ ++ Y +
Sbjct: 198 PNVFTFNIVIDFLCK----------EGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGK 247
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ ++ M++ G V TY +++ C GR+E A GEM R GV + T
Sbjct: 248 CGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVT 307
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
++ F + AMKL+ QM+ + +PN TY L+ R+D + + +
Sbjct: 308 FSTFVDAFCKEGLVQEAMKLFAQMRVRGM-MPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 366
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
L ++ +YT+++ GLC++ K EA M G+ ++ + TL G
Sbjct: 367 VHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHG 419
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 10/181 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI G CK I A +M E G++PNV Y L++G C+ SL+
Sbjct: 513 PNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLN----- 567
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +EM +G+ D ++ ++ Y + Q + M E G+ +
Sbjct: 568 -----KAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYC 622
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT + C+ +++A +L EM+ G++P YNC ++Y+ + A L +M+
Sbjct: 623 YTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEME 682
Query: 182 E 182
Sbjct: 683 S 683
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P V T+ V+ LC G + +A L M G SP TYN Y D +L
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+M++ C ++ TYN LI F RM+ + +K + ++ +++ + C
Sbjct: 258 VSEMRKSG-CAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFC 316
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
++ +EA + F +M +G++P + T+ +L G ++ L
Sbjct: 317 KEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRL 356
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 11/176 (6%)
Query: 97 AHKPQLSLDKLNFMKEKGIC--PTVATYTSVVKCLCSC----GRIEDAEELLGEMVRNGV 150
H+P L+ ++ + + P + SVV L S G ++DA L + + V
Sbjct: 106 GHRPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADHGLLDDAVRALARVRQLRV 165
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
P+ T N + +L+ D L VPN+ T+NI+I + R
Sbjct: 166 PPNTRTCNHILLRLARNRQGGLVRRLF-----DLLPVPNVFTFNIVIDFLCKEGELVEAR 220
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ +K D+ +Y LI G + +E Q EM + G VT+ L
Sbjct: 221 ALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNAL 276
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 139/306 (45%), Gaps = 47/306 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+ LI G+CKI+ + AE+ +MI+ PNV TYN LNG+ R+
Sbjct: 154 VPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGR------ 207
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS------RAH---------------- 98
I +A+ V++EM G PDV ++S ++H +S +AH
Sbjct: 208 ----IADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAV 263
Query: 99 -------------KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
KP + + M E+G P TYT+++ C+ G+IE A E+ EM
Sbjct: 264 TYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEM 323
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
V G P YNC K + A +L++ M + C P+ ++NI+I R
Sbjct: 324 VSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE-CKPDTVSHNIMIDGLSKAKR 382
Query: 206 MDMVREIWNHVKGSE-LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+D E++ ++ DL +Y LI GLC +Q+ EA + F E+ L P F
Sbjct: 383 LDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFN 442
Query: 265 TLYRGL 270
L +
Sbjct: 443 VLLEAM 448
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 132/293 (45%), Gaps = 27/293 (9%)
Query: 7 YTSLIYGWCKINRIDMAE---RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
+T+ + G CK +I+ A R + E + P+ T + ++ +C+
Sbjct: 14 WTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGR--------- 64
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT-- 121
+ +A + + M RG PD+ + S++++ +A K Q + + L +G+ T++T
Sbjct: 65 -VDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFL-----QGMNRTISTRA 118
Query: 122 -----YTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMK 175
Y S++ LC ++ A + MV V P +Y+ + + A K
Sbjct: 119 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEK 178
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
LY+QM + + CVPN+ TYN + M R+ + ++ + + D+ +Y+ LIHG
Sbjct: 179 LYKQMIDLN-CVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGF 237
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+K +A + F MI +G P VT+ L GL + L +K+ E
Sbjct: 238 SLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 136/270 (50%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y LI G C R AE+ L +M+ RG P+VVT+N+L+N +CR+ L
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLG---- 206
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A V ++M G P+ S++ +LH + + K + +++ L M +G P +
Sbjct: 207 ------RAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIV 260
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC G+++ A ELL ++ G SP TYN + A KL +M
Sbjct: 261 TYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEM 320
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L P+I TY+ L+G ++D + ++ ++ + + +Y ++ GLC+ +K
Sbjct: 321 RAKGL-KPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARK 379
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A + M+++G P + ++ L GL
Sbjct: 380 TDRAIDFLAYMVQRGCKPTEASYTILIEGL 409
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 11/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ TSLI G+CKI + A R + + + G P+V+TYNVL++G+C
Sbjct: 116 IPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWM---- 171
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+AEK+ +M RG P V +F+I+++ R ++D L M + G P
Sbjct: 172 ------DAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSL 225
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y ++ C ++E A E LG+M G P TYN + A++L Q+
Sbjct: 226 SYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQL 285
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C P + TYN +I + + D ++ + ++ L D+ +Y+ L+ GL + K
Sbjct: 286 SSKG-CSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGK 344
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA ++F ++ G+ P +T+ + GL ++
Sbjct: 345 VDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKA 377
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 8/222 (3%)
Query: 55 LHPNERFEKTIRNAE-----KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF 109
+ N K +RN E + + M RG PD+ + ++ + + K + + +
Sbjct: 85 IESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEI 144
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
+++ G P V TY ++ +CS GR DAE+LL +MVR G SPS T+N + RK
Sbjct: 145 IEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILI-NFLCRKG 203
Query: 170 ANG-AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
G A+ + +M + C PN +YN L+ F +M+ E + D+ +Y
Sbjct: 204 LLGRAIDVLEKMPKHG-CTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTY 262
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
L+ LC+ K A + ++ KG P +T+ T+ GL
Sbjct: 263 NTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 304
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%)
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+P+I LI F + + I ++ S D+ +Y +LI G+C +W +A +
Sbjct: 116 IPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEK 175
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+M+ +G P VTF L L + +L
Sbjct: 176 LLADMVRRGCSPSVVTFNILINFLCRKGLL 205
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 138/287 (48%), Gaps = 11/287 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++K YT L+ GW + M + EMI+ G+ P+VV Y +L++ C+
Sbjct: 263 VPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCD---- 318
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVF EM G P + ++++ + +L K+ G V
Sbjct: 319 ------EAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEHYKKSGFPMEVP 372
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +VV C + + A +++ EM + V P++ TY+ + A ++++M
Sbjct: 373 TCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRM 432
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D C P ++TY +++GMF + R+DM ++W + + + ++ LI+GLC + +
Sbjct: 433 GIDG-CEPQLNTYTMMVGMFCSNGRVDMALKVWKQMGEKGVLPCMHMFSALINGLCFENR 491
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+EAC YF EM++KG+ P F L L+Q + + + KLD
Sbjct: 492 LEEACVYFQEMLDKGIRPPGQLFSNLKEALVQGGRISLAQEVALKLD 538
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 125/260 (48%), Gaps = 22/260 (8%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG-IEPDVTSFSIVLH 92
G++ + YN L++ + + K ++ A+ ++ EM+ +G PD+ ++++++
Sbjct: 225 GLKTELSDYNWLIDTLSK----------SKQVKKAQAIYKEMKRKGKFVPDLKTYTVLME 274
Query: 93 VYSRAHKPQLSLDKLNF--MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+ H+ L + K + M + GI P V Y ++ C G+ ++A ++ EM +G
Sbjct: 275 GW--GHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGC 332
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
PS Y + + A+K + K+ + + T N ++G + ++
Sbjct: 333 MPSPHVYCMLINGLGSEERLDEALKYFEHYKKSGFPM-EVPTCNAVVGAYCRASKFQHAF 391
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ + ++ ++G + +Y +++H L + QK++EA F M G PQ T+ T+ G+
Sbjct: 392 KMVDEMRKCKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTY-TMMVGM 450
Query: 271 IQSD-----MLRTWRRLKKK 285
S+ L+ W+++ +K
Sbjct: 451 FCSNGRVDMALKVWKQMGEK 470
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%)
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ +V+ ++++A E +M G+ YN K A +Y++M
Sbjct: 197 TFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEM 256
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K VP++ TY +L+ + + MV+ ++ + + + D+ +Y MLI C+ K
Sbjct: 257 KRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGK 316
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA + F EM G +P + L GL
Sbjct: 317 CDEAIKVFYEMEASGCMPSPHVYCMLINGL 346
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 137/287 (47%), Gaps = 11/287 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G CKI A +M E G +P+VVTY+ +++ +C+
Sbjct: 8 PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCK---------- 57
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A +F M+ +GI P++ +++ ++ + + + LN M I P + T
Sbjct: 58 DRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVT 117
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ ++ C G + +A +L M GV P+ TY+ Y + + A KL+ M
Sbjct: 118 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMI 177
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P++ +YNILI + R+ ++++N + L D+ SY LI GLC+ +
Sbjct: 178 TKG-CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 236
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+EA F M+ G LP T+ L G + L RL + +
Sbjct: 237 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 283
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 136/261 (52%), Gaps = 19/261 (7%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M+ RG +P+V TY ++NG+C+ +T+ A +F +M G +PDV ++S
Sbjct: 1 MVARGYQPDVHTYTTIINGLCK---------IGETVA-AAGLFKKMGEAGCQPDVVTYST 50
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ + + +LD ++MK KGI P + TY S+++ LC+ R +A +L EM+
Sbjct: 51 IIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN 110
Query: 150 VSPSAETY----NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+ P+ T+ N F KE +A G +K +M + PN+ TY+ L+ +
Sbjct: 111 IMPNIVTFSLLINIFCKE-GNVFEARGVLKTMTEMGVE----PNVVTYSSLMNGYSLQAE 165
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ R++++ + D+ SY +LI+G C+ ++ EA Q F EMI +GL P V++ T
Sbjct: 166 VFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNT 225
Query: 266 LYRGLIQSDMLRTWRRLKKKL 286
L GL Q LR L K +
Sbjct: 226 LIDGLCQLGRLREAHDLFKNM 246
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 134/285 (47%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I CK R++ A M +G+ PN+ TYN L+ G+C +
Sbjct: 43 PDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRW------ 96
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R A + +EM I P++ +FS++++++ + + L M E G+ P V T
Sbjct: 97 ----REASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVT 152
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ + +A +L M+ G P +YN Y K A +L+ +M
Sbjct: 153 YSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMI 212
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I +YN LI L R+ +++ ++ + DL +Y++L+ G C++
Sbjct: 213 HQGL-TPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYL 271
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A + F M L P V + L + +S L+ R+L +L
Sbjct: 272 AKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL 316
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 121/259 (46%), Gaps = 46/259 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN+ ++ LI +CK + A L M E GVEPNVVTY+ L+NG +A E
Sbjct: 112 MPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQA-----EV 166
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
FE A K+FD M +G +PDV S++I+++ Y +A + + N M +G+ P +
Sbjct: 167 FE-----ARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIV 221
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y +++ LC GR+ +A +L M+ NG P TY+ + + A +L+R M
Sbjct: 222 SYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM 281
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L PN+ YNI LI +C+ +
Sbjct: 282 QSTYL-KPNMVMYNI-----------------------------------LIDAMCKSRN 305
Query: 241 WKEACQYFVEMIEKGLLPQ 259
KEA + F E+ +GL P
Sbjct: 306 LKEARKLFSELFVQGLQPN 324
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 25/108 (23%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +LI G C++ R+ A M+ G P++ TY++LL+G C++ L R
Sbjct: 218 PDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRL 277
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDV 84
+ ++ A K+F E+ V+G++P++
Sbjct: 278 FRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 142/283 (50%), Gaps = 11/283 (3%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
SL+ G K+ +D+A E++ GV+ NV T N+++N +C+ + I N
Sbjct: 328 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCK----------NQKIENT 377
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
+ +M +G+ PDV +++ +++ Y R + + + ++ M KG+ P V TY +++
Sbjct: 378 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 437
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC G+ A+ +L EM++ G+SP TYN E + A +++ +M + VP
Sbjct: 438 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGV-VP 496
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
++ +++ LIG+ +D + + +K + L D YT+LI G C EA +
Sbjct: 497 DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVR 556
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM+E+G VT+ T+ GL + ML L ++ E +
Sbjct: 557 DEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 599
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 137/303 (45%), Gaps = 46/303 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y ++I G CK + A+ L EM++ G+ P+ TYN+LL CR ++
Sbjct: 426 PCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMM----- 480
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP---- 117
+AE++FDEM +G+ PD+ SFS ++ + S+ +L MK G+ P
Sbjct: 481 -----DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 535
Query: 118 -------------------------------TVATYTSVVKCLCSCGRIEDAEELLGEMV 146
V TY +++ LC + +A+EL EM
Sbjct: 536 YTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMT 595
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
GV P T+ Y + N A+ L+ M + +L P++ TYN LI F + M
Sbjct: 596 ERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNL-KPDVVTYNTLIDGFCKGSEM 654
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ V E+WN + + + SY +LI+G C EA + + EM+EKG +T T+
Sbjct: 655 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 714
Query: 267 YRG 269
+G
Sbjct: 715 VKG 717
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 44/319 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YT LI G+C+ + A + EM+E+G +VVTYN +LNG+C+
Sbjct: 531 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCK---------- 580
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + A+++F EM RG+ PD +F+ +++ Y + ++ M ++ + P V T
Sbjct: 581 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVT 640
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +E EL +M+ + P+ +Y Y + A +L+ +M
Sbjct: 641 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 700
Query: 182 EDDL----------------------------------CVPNIHTYNILIGMFMALNRMD 207
E VP+ TYN LI F+ MD
Sbjct: 701 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMD 760
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ N ++ S L D+ +Y ++++G + + +EA ++MIE+G+ P + T+ +L
Sbjct: 761 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 820
Query: 268 RGLIQSDMLRTWRRLKKKL 286
G + + L+ R+ ++
Sbjct: 821 NGHVTQNNLKEAFRVHDEM 839
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 11/257 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI G+ K ++ A MI+R ++P+VVTYN L++G C+ + +
Sbjct: 601 PDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME----- 655
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+++++M R I P+ S+ I+++ Y + + M EKG T+ T
Sbjct: 656 -----KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 710
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++VK C G A+E L M+ G+ P TYN + ++ + A L +M+
Sbjct: 711 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME 770
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L +P++ TYN+++ F RM I + + D +YT LI+G +
Sbjct: 771 NSGL-LPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL 829
Query: 242 KEACQYFVEMIEKGLLP 258
KEA + EM+++G +P
Sbjct: 830 KEAFRVHDEMLQRGFVP 846
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 1/205 (0%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F +++ Y +A K + + +K KG+C ++ S++ L G ++ A E+ E+V
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 350
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
R+GV + T N + M+E + P++ TYN LI + +
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGV-FPDVVTYNTLINAYCRQGLL 409
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ E+ + + G L + +Y +I+GLC+ K+ A EM++ G+ P T+ L
Sbjct: 410 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 469
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESI 291
++D + R+ ++ + +
Sbjct: 470 LVECCRNDNMMDAERIFDEMPSQGV 494
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +LI G+ K +D A + +M G+ P+V+TYNV+LNG R+ +
Sbjct: 740 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRM----- 794
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
+ AE + +M RG+ PD ++++ +++ + + + + + M ++G P
Sbjct: 795 -----QEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y ++ G+ + R+ AE + +MIERGV P+ TY L+NG + +L
Sbjct: 775 LPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL----- 829
Query: 61 FEKTIRNAEKVFDEMRVRGIEPD 83
+ A +V DEM RG PD
Sbjct: 830 -----KEAFRVHDEMLQRGFVPD 847
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 139/297 (46%), Gaps = 26/297 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT LI CK + + A + L EM ++G +P+VVTYNVL+NG+C+ L RF
Sbjct: 245 PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRF 304
Query: 62 EKTI-------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ +AEK EM +G P V +F+I+++ R
Sbjct: 305 LNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCR 364
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++D L M + G P +Y ++ LC ++E A E L MV G P T
Sbjct: 365 KGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVT 424
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + A+++ Q+ C P + TYN +I + + D ++ + +
Sbjct: 425 YNTLLTALCKDGKVDVAVEILNQLGSKG-CSPVLITYNTVIDGLSKVGKTDDAIKLLDEM 483
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
KG L D+ +Y+ L+ GL + K EA +F ++ E G+ P +T+ ++ GL ++
Sbjct: 484 KGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKA 540
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 146/310 (47%), Gaps = 20/310 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + ++ C R AE+FL EMI +G P+VVT+N+L+N +CR+
Sbjct: 315 PNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKG-------- 366
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A V ++M G P+ S++ +LH + K + +++ L+ M +G P + T
Sbjct: 367 --LIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVT 424
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G+++ A E+L ++ G SP TYN + A+KL +MK
Sbjct: 425 YNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMK 484
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I TY+ L+G ++D ++ ++ + + +Y ++ GLC+ ++
Sbjct: 485 GKGL-KPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQT 543
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR---------TWRRLKKKLDEESIT 292
A + M+ +G P + ++ L GL + + R + KK E +
Sbjct: 544 VRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVV 603
Query: 293 FGSEFQNYHF 302
F ++F
Sbjct: 604 VKIPFNVFYF 613
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 150/338 (44%), Gaps = 57/338 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ C ++ A L ++R P+V+TY +L+ C+
Sbjct: 210 PDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCK---------- 259
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A K+ DEMR +G +PDV +++++++ + + ++ LN M G P V T
Sbjct: 260 ESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVIT 319
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM------- 174
+ +++ +CS GR DAE+ L EM+R G SPS T+N + RK G
Sbjct: 320 HNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILIN-FLCRKGLIGRAIDVLEKM 378
Query: 175 -----------------------KLYRQMKEDDL-----CVPNIHTYNILIGMFMALNRM 206
K+ R ++ D+ C P+I TYN L+ ++
Sbjct: 379 PQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 438
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D+ EI N + L +Y +I GL + K +A + EM KGL P +T+ TL
Sbjct: 439 DVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTL 498
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
GL + + K+D E+I F + + KP
Sbjct: 499 VGGLSR----------EGKVD-EAIAFFHDLEEMGVKP 525
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 130/271 (47%), Gaps = 14/271 (5%)
Query: 25 RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84
+FL +M+ RG P+++ L+ G+C+ KT + A +V + + G PDV
Sbjct: 131 KFLEDMVCRGDIPDIIACTSLIRGLCKTG---------KTWK-ATRVMEILEDSGAVPDV 180
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++++++ Y + + +L L+ M + P V TY ++++ LC G++++A E+L
Sbjct: 181 ITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDR 237
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
++ P TY + AMKL +M+ D C P++ TYN+LI
Sbjct: 238 QMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMR-DKGCKPDVVTYNVLINGICKEG 296
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
R+D NH+ ++ ++ +++ +C +W +A ++ EMI KG P VTF
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
L L + ++ + +K+ + T S
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNS 387
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 133/307 (43%), Gaps = 49/307 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ TSLI G CK + A R + + + G P+V+TYNVL++G C+
Sbjct: 142 IPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGE------ 195
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I +A ++ D M V PDV +++ +L + K + +++ L+ ++ P V
Sbjct: 196 ----IGSALQLLDRMSV---SPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVI 248
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT +++ C + A +LL EM G P TYN + A++ M
Sbjct: 249 TYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHM 308
Query: 181 KEDDLCVPNIHTYNILIGMFMALNR--------MDMVRE------------IWNHVKGSE 220
C PN+ T+NI++ + R +M+R+ I +
Sbjct: 309 PSYG-CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGL 367
Query: 221 LGLDLD---------------SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+G +D SY L+H LC+ +K + A +Y M+ +G P VT+ T
Sbjct: 368 IGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNT 427
Query: 266 LYRGLIQ 272
L L +
Sbjct: 428 LLTALCK 434
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 132/272 (48%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +LI G C R D A L +M+ RG P+VVTY +LL C+R+
Sbjct: 150 PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGY------ 203
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+ DEMR +G PD+ ++++V++ + + +++ L + G P +
Sbjct: 204 ----KQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVS 259
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V+K LC+ R EDAE+L+ EM R G P+ T+N R AM++ Q+
Sbjct: 260 YNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIP 319
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C PN +YN ++ F +MD + S D+ SY L+ LC +
Sbjct: 320 KYG-CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEV 378
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
A + ++ +KG P +++ T+ GL ++
Sbjct: 379 DAAVELLHQLKDKGCTPVLISYNTVIDGLTKA 410
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 145/304 (47%), Gaps = 22/304 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT L+ CK + A + L EM ++G P++VTYNV++NG+C+
Sbjct: 184 VPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ--------- 234
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + +A + + G EP+ S++IVL A + + + + M KG P V
Sbjct: 235 -EGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVV 293
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++ LC G +E A E+L ++ + G +P++ +YN + +K + AM M
Sbjct: 294 TFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 353
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C P+I +YN L+ +D E+ + +K L SY +I GL + K
Sbjct: 354 VSSG-CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 412
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
+EA + EM+ KGL P +T+ T+ GL + + EE+I + Q+
Sbjct: 413 TEEALELLNEMVTKGLQPDIITYSTISSGLCREGRI-----------EEAIKAFCKVQDM 461
Query: 301 HFKP 304
+P
Sbjct: 462 GIRP 465
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 134/291 (46%), Gaps = 14/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ G+C ++D A R + M +EP+ TYN L+ G+C R
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTD----- 169
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA V D+M RG PDV +++I+L + + ++ L+ M++KG P + T
Sbjct: 170 -----NALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVT 224
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y VV +C GR++DA E L + G P+ +YN K + A KL +M
Sbjct: 225 YNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMS 284
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
PN+ T+N+LI ++ EI + + + SY ++H C+++K
Sbjct: 285 RKGR-PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKM 343
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + M+ G P V++ TL L + + L +L ++ T
Sbjct: 344 DRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 394
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 134/271 (49%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++ G C+ R+D A FL + G EPN V+YN++L G+C ER+
Sbjct: 220 PDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTA------ERW 273
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +AEK+ EM +G P+V +F++++ R + +++ L+ + + G P +
Sbjct: 274 E----DAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLS 329
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C +++ A + MV +G P +YN + + A++L Q+K
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C P + +YN +I + + E+ N + L D+ +Y+ + GLC + +
Sbjct: 390 -DKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRI 448
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+EA + F ++ + G+ P V + + GL +
Sbjct: 449 EEAIKAFCKVQDMGIRPNTVLYNAILLGLCK 479
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 28/286 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ G C R + AE+ + EM +G PNVVT+N+L++ +CRR + P
Sbjct: 255 PNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEI 314
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+K + A + M G PD+ S++ +L R
Sbjct: 315 LDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCR 374
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +++ L+ +K+KG P + +Y +V+ L G+ E+A ELL EMV G+ P T
Sbjct: 375 GGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIIT 434
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN-ILIGMFMALNRMDMVREIWNH 215
Y+ A+K + ++++ + PN YN IL+G+ + +++ +
Sbjct: 435 YSTISSGLCREGRIEEAIKAFCKVQDMGI-RPNTVLYNAILLGLCKRRATHSAI-DLFTY 492
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
+ + + +YT+LI GL + KEA + E+ +G++ + +
Sbjct: 493 MVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTL 538
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 138/268 (51%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV+ YT LI+G CK +++ A M+E G+EPNVVTY L+ G C
Sbjct: 245 PNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN---------- 294
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ A ++ M G+ P+ +FS+++ + K + + L + +KG+
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ LC G+I+ A+EL+ +M+ G P A +Y+ +K + A + M
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + + TY I+I + + ++I++ + + + D+ +YT+ + CE+ +
Sbjct: 415 EKGIQASPV-TYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRM 473
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
++A V+M+++G+ P VT+ TL RG
Sbjct: 474 EDAESMIVQMVDRGVFPNLVTYNTLIRG 501
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 130/271 (47%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +Y ++++G C+ R + AE L E + G EPN+V YN L++G C +
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEME----- 229
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A KVF+ M P+V +++ ++H ++ K + ++ + M E G+ P V T
Sbjct: 230 -----HALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++++ C+ G ++ A LL M NG+ P+ T++ R+ A +
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLV 344
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + V + Y LI ++D E+ + D SY+ LI GLC ++K
Sbjct: 345 KKGVKVNEV-VYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKL 403
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+A +M+EKG+ VT+ + L++
Sbjct: 404 SQATLMLEDMMEKGIQASPVTYTIIIDELVR 434
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 134/306 (43%), Gaps = 44/306 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN ++ LI CK +++ A+ FLG ++++GV+ N V Y L++G+C+ + +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373
Query: 61 F-------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+K + A + ++M +GI+ +++I++
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433
Query: 96 R---AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
R + P+ DK M GI P + TYT V+ C GR+EDAE ++ +MV GV P
Sbjct: 434 REVGSEGPKKIFDK---MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
+ TYN + Y + A + M PN +Y +L+ + + + D +I
Sbjct: 491 NLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGW-KPNEDSYTVLLRLVVKKSSSDNSVDI 549
Query: 213 WN------------HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
W + +L L D Y+ I LC + +EA +F+ M L P +
Sbjct: 550 WKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSE 609
Query: 261 VTFETL 266
+ ++
Sbjct: 610 DVYTSI 615
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 23/297 (7%)
Query: 1 MP--NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
MP N++ YT+LI +C I A++ L ++ G+ P+ Y + G CR L
Sbjct: 67 MPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGML--- 123
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+A +VF M +RG +++ +LH A + ++ M+ P
Sbjct: 124 -------THACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPD 176
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
Y ++V LC GR E+AE LL E + NG P+ YN Y + A+K++
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M + + C PN+ TY LI +++ +++ + + L ++ +YT LI G C +
Sbjct: 237 GM-DGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
+ A + M GL+P TF L L + ++K++E + GS
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK----------REKVEEAQLFLGS 342
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 130/315 (41%), Gaps = 26/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
P+ YTS + G+C+ + A R M RG TY LL+G+
Sbjct: 105 PDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTV 164
Query: 51 ----RRASLHPNERFEKTIRNA----------EKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R S P+ T+ + E + +E G EP++ ++ ++ Y
Sbjct: 165 FVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCN 224
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + +L M P V TYT ++ LC G++E A L MV G+ P+ T
Sbjct: 225 AGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + A +L M+ + L VPN T+++LI +++ + +
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGL-VPNDWTFSVLIDALCKREKVEEAQLFLGSL 343
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ ++ YT LI GLC+ K A + +MI +G +P ++ +L GL + L
Sbjct: 344 VKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKL 403
Query: 277 RTWRRLKKKLDEESI 291
+ + + E+ I
Sbjct: 404 SQATLMLEDMMEKGI 418
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 147/297 (49%), Gaps = 26/297 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----------- 51
+V Y +LIYG+C + ++ A L EM+ + + PNV TYN+L++ +C+
Sbjct: 233 DVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL 292
Query: 52 ----RASLHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+A + P+ T ++ A+ VF+ M + G+ PDV +++I+++ + +
Sbjct: 293 AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+L+ M +K + P + TY+S++ LC GRI +L+ EM G TY
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITY 412
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
+ + A+ L+ +MK+ ++ PNI T+ IL+ R+ +E++ +
Sbjct: 413 SSLIDGLCKNGHLDRAIALFNKMKDQEI-RPNIFTFTILLDGLCKGGRLKDAQEVFQDLL 471
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
L++ +Y ++I+G C++ +EA +M + G +P TFET+ L + D
Sbjct: 472 TKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKD 528
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CKI A +FL ++ R +P+VV YN +++ +C+ + +
Sbjct: 167 YATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKY----------QLVS 216
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +F EM V+GI DV +++ +++ + K + ++ LN M K I P V TY +V
Sbjct: 217 EAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G++++A+ +L M++ V P TY+ Y + A ++ M +
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV- 335
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++HTY ILI F +D ++ + + + +Y+ LI GLC+ +
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWD 395
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM ++G +T+ +L GL ++ L L K+ ++ I
Sbjct: 396 LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 134/285 (47%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V MY ++I CK + A EM +G+ +VVTYN L+ G C L
Sbjct: 197 PDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKL------ 250
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + +EM ++ I P+V +++I++ + K + + L M + + P V T
Sbjct: 251 ----KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ ++ A+ + M GV+P TY + K + A+ L+++M
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ VP I TY+ LI R+ V ++ + ++ D+ +Y+ LI GLC+
Sbjct: 367 QKNM-VPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHL 425
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A F +M ++ + P TF L GL + L+ + + + L
Sbjct: 426 DRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 132/298 (44%), Gaps = 28/298 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ LI +C + +I L ++++RG P+ VT N L+ G+C + + F
Sbjct: 92 PDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHF 151
Query: 62 EKTI-------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ R A K ++ R +PDV ++ ++ +
Sbjct: 152 HDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCK 211
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + M KGI V TY +++ C G++++A LL EMV ++P+ T
Sbjct: 212 YQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYT 271
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNH 215
YN A + M + CV P++ TY+ L+ + + + + ++N
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKA--CVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + D+ +YT+LI+G C+ + EA F EM +K ++P VT+ +L GL +S
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT LI G+CK +D A EM ++ + P +VTY+ L++G+C+
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR------- 389
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I + DEMR RG DV ++S ++ + ++ N MK++ I P + T
Sbjct: 390 ---ISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFT 446
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T ++ LC GR++DA+E+ +++ G + TYN + + A+ + +M
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKM- 505
Query: 182 EDDLCVPNIHTY-NILIGMF 200
ED+ C+PN T+ I+I +F
Sbjct: 506 EDNGCIPNAFTFETIIIALF 525
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + Y+SLI G CK RI + EM +RG +V+TY+ L++G+C+ L
Sbjct: 371 VPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD---- 426
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +F++M+ + I P++ +F+I+L + + + + + + KG V
Sbjct: 427 ------RAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVY 480
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ C G +E+A +L +M NG P+A T+ + + + A KL RQM
Sbjct: 481 TYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 86/219 (39%), Gaps = 1/219 (0%)
Query: 52 RASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK 111
+ H + + +A F+ M P + F+ +L +++ ++ + ++
Sbjct: 27 HSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLE 86
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
KGI P + T ++ C C G+I +L ++++ G P T N K +
Sbjct: 87 LKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVK 146
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A+ + ++ + + +Y LI + + + G D+ Y +
Sbjct: 147 KALHFHDKLLAQGFQLNQV-SYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTI 205
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
I +C+ Q EA F EM KG+ VT+ TL G
Sbjct: 206 IDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGF 244
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PNV +YT+LI G CK + +A+ +M G+ PN TY+VL+NG +
Sbjct: 191 PNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQM 250
Query: 52 -----RASLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R+ + PN + + A KVF EMR +GI V +++I++ R
Sbjct: 251 YENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K ++ ++ + + G+ P + TY ++ C G+++ A L ++ +G+SP+ T
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT 370
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN Y ++ GA+ L ++M+E + + TY ILI F LN D E+ + +
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIARSKV-TYTILIDAFARLNYTDKACEMHSLM 429
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ S L D+ +Y++LIHG C KEA + F + E L P V + T+ G
Sbjct: 430 EKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHG 482
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 125/263 (47%), Gaps = 11/263 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y LI +C +D A + EM E+G+ V+TYN+L+ G+CR ++
Sbjct: 260 VPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR------GKK 313
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F + ++ KV G+ P++ +++I+++ + K ++ N +K G+ PT+
Sbjct: 314 FGEAVKLVHKV----NKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLV 369
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ + A +L+ EM ++ S TY + + A +++ M
Sbjct: 370 TYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLM 429
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L VP+++TY++LI M + + + L + Y +IHG C++
Sbjct: 430 EKSGL-VPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGS 488
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
A + EM+ G++P +F
Sbjct: 489 SYRALRLLNEMVHSGMVPNVASF 511
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 122/290 (42%), Gaps = 46/290 (15%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + +I G C+ R L + E G+ PNVV Y L++G C+
Sbjct: 157 NAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGD-------- 208
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A+ +F +M G+ P+ ++S++++ F K+
Sbjct: 209 --VMLAKNLFCKMDRLGLVPNQHTYSVLMN---------------GFFKQ---------- 241
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
G + ++ M R+G+ P+A YNC EY + A K++ +M+E
Sbjct: 242 ----------GLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMRE 291
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ + TYNILIG + ++ + V L ++ +Y +LI+G C+ K
Sbjct: 292 KGIAC-GVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMD 350
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + F ++ GL P VT+ TL G + + L L K+++E I
Sbjct: 351 TAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIA 400
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 20/291 (6%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y +++ + + D A FL MI G P T+N LL + R + F+K
Sbjct: 91 LYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIR------SNYFDK-- 142
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
A +F+ ++ + + + SF I++ A L ++E G+ P V YT++
Sbjct: 143 --AWWIFNVLKSK-VVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTL 199
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKDANGAMKLYRQMK 181
+ C G + A+ L +M R G+ P+ TY N FFK+ R+ ++Y M
Sbjct: 200 IDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQRE----GFQMYENMN 255
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ VPN + YN LI + +D +++ ++ + + +Y +LI GLC +K+
Sbjct: 256 RSGI-VPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKF 314
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EA + ++ + GL P VT+ L G + T RL +L ++
Sbjct: 315 GEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 10/151 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT LI + ++N D A M + G+ P+V TY+VL++G C ++ +
Sbjct: 406 YTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNM----------K 455
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A K F + ++P+ ++ ++H Y + +L LN M G+ P VA++ S +
Sbjct: 456 EASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTM 515
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
LC + ++AE LLG+M+ +G+ PS Y
Sbjct: 516 GLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +Y ++I+G+CK A R L EM+ G+ PNV ++ + +CR +E++
Sbjct: 471 PNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCR------DEKW 524
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIV 90
+ AE + +M G++P V+ + +V
Sbjct: 525 ----KEAELLLGQMINSGLKPSVSLYKMV 549
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 161/350 (46%), Gaps = 65/350 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
PNV Y +L+ + + +D AER +G M E G++PN+VT+N ++NG+C+ + +
Sbjct: 223 PNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKV 282
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F++ +R A VF EM +GI PDV +F+ ++HV +
Sbjct: 283 FDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCK 342
Query: 97 AHKPQLSLDKLNFMKEKG-----------------------------------ICPTVAT 121
A + ++ + M+E+G I P+V
Sbjct: 343 AGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVC 402
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C GR+++A ELL EM G+ P TY+ Y D + A +L +QM
Sbjct: 403 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 462
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLCEKQ 239
E + +P+ TY+ LI + R+ ++ ++ +LGL D +YT LI G C++
Sbjct: 463 EKGV-LPDAITYSSLIRVLCGEKRLSDAHVLFKNMI--KLGLQPDEFTYTSLIDGHCKEG 519
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
+ A +M++ G+LP VT+ L GL +S ++L KL E
Sbjct: 520 NVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 569
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 142/305 (46%), Gaps = 17/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +++ + + A RF M+ GV PNV TYN+L+ +C R H E
Sbjct: 153 VPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRG--HRKE- 208
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + +MR G P+V +++ ++ + RA + + + M+E G+ P +
Sbjct: 209 -------ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLV 261
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ S+V +C G++EDA ++ EMVR G++P +YN Y ++ A+ ++ +M
Sbjct: 262 TFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM 321
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + +P++ T+ LI + ++ + ++ L ++ ++T LI G C+K
Sbjct: 322 TQKGI-MPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 380
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
+A M + + P V + L G + R L K L + +T+ +
Sbjct: 381 LDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 440
Query: 296 EFQNY 300
Y
Sbjct: 441 IISAY 445
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 149/361 (41%), Gaps = 76/361 (21%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---- 56
MP+V +TSLI+ CK ++ A + +M ERG++ N VT+ L++G C++ L
Sbjct: 327 MPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 386
Query: 57 -----------PNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
P+ + N A ++ EM +G++PDV ++S ++ Y
Sbjct: 387 AVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 446
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + M EKG+ P TY+S+++ LC R+ DA L M++ G+ P
Sbjct: 447 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEF 506
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI-------------------- 195
TY + + A+ L+ +M + + +P++ TY++
Sbjct: 507 TYTSLIDGHCKEGNVESALSLHDKMVKAGV-LPDVVTYSVLINGLSKSARAMEAQQLLFK 565
Query: 196 ------------------------------LIGMFMALNRMDMVREIWNHVKGSELGLDL 225
L+ F M+ +++ + LD
Sbjct: 566 LYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDG 625
Query: 226 DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK 285
Y++LIHG C +A + +M++ G P + +L RGL ++ M+ ++ ++
Sbjct: 626 SVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQ 685
Query: 286 L 286
L
Sbjct: 686 L 686
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 116/256 (45%), Gaps = 18/256 (7%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G P+V+ YN +L + + ++ +A + FD M G+ P+V +++I++
Sbjct: 151 GYVPSVLAYNAVLLALS-----------DASLTSARRFFDSMLSDGVAPNVYTYNILVRA 199
Query: 94 Y-SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
R H+ + +L L M+ G P V TY ++V G ++ AE L+G M G+ P
Sbjct: 200 LCGRGHRKE-ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKP 258
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
+ T+N A K++ +M + L P+ +YN L+G + +
Sbjct: 259 NLVTFNSMVNGMCKAGKMEDARKVFDEMVREGL-APDGVSYNTLVGGYCKAGCSHEALSV 317
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ + + D+ ++T LIH +C+ + A +M E+GL +VTF L G +
Sbjct: 318 FAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCK 377
Query: 273 ----SDMLRTWRRLKK 284
D L R +K+
Sbjct: 378 KGFLDDALLAVRGMKQ 393
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/277 (18%), Positives = 114/277 (41%), Gaps = 32/277 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+SLI C R+ A MI+ G++P+ TY L++G C+
Sbjct: 467 LPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCK--------- 517
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + +A + D+M G+ PDV ++S++++ S++ + + L + + P
Sbjct: 518 -EGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANT 576
Query: 121 TYTSVVKC---------------LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR 165
Y +++ C C G + +A+++ M+ + Y+ +
Sbjct: 577 KYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHC 636
Query: 166 GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF---MALNRMDMVREIWNHVKGSELG 222
+ A+ ++QM + + T +++ G+F M + +++++ N+ +
Sbjct: 637 RAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLA--- 693
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
D ++ LI + M + GLLP
Sbjct: 694 -DAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 134/309 (43%), Gaps = 48/309 (15%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y+ I G CK +I A EM E+G P+ TYN+L+NG+C+ A L
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLE------ 143
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ DEM+ RG P V +++ ++H + A + ++D L+ M+ +GI P TY
Sbjct: 144 ----MGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTY 199
Query: 123 TSVVKCLCSCGRIEDA-------------------------------------EELLGEM 145
T++++ LC CG +E A E L EM
Sbjct: 200 TALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEM 259
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+ +G P+ TY + A L +M C ++ YN LI +
Sbjct: 260 IISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIG-CELDVVIYNSLIDGLCKMGE 318
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+D RE+ + + D+ +YT LI GLC+ EA EM KG++P VT+ T
Sbjct: 319 LDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTT 378
Query: 266 LYRGLIQSD 274
L G Q+D
Sbjct: 379 LINGFTQAD 387
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 125/271 (46%), Gaps = 13/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V YT+LI+G+C R+D A L EM RG+ PN VTY L+ G+C
Sbjct: 159 PTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGE------- 211
Query: 62 EKTIRNAEKVFDEMRVRGIE--PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ A V EM++RG E P+V +++ ++H + ++ ++ L+ M G P
Sbjct: 212 ---VERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNN 268
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
ATYT+++ LC G +A LL EMV G YN + + A ++
Sbjct: 269 ATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQIL 328
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E + P++ TY LI +D + ++ + + +YT LI+G +
Sbjct: 329 MVEKGV-APDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQAD 387
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ A Q EM GL+P ++ L++ L
Sbjct: 388 RTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 129/258 (50%), Gaps = 11/258 (4%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ +V++Y+ +NG+C++ I A ++F EM +G PD +++I+++
Sbjct: 88 DTDVISYSRKINGLCKKGQ----------IAEAMEIFREMEEKGSAPDSFTYNILINGLC 137
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + ++ + ++ M+ +G PTV TYT+++ C+ GR++ A ++L EM G++P+
Sbjct: 138 KDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTV 197
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMK-EDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TY + + A+ + ++MK + C PN+ TY LI +M E +
Sbjct: 198 TYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLD 257
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ S + +YT LIHGLC+K + EA EM+ G V + +L GL +
Sbjct: 258 EMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMG 317
Query: 275 MLRTWRRLKKKLDEESIT 292
L R ++ + E+ +
Sbjct: 318 ELDFAREMQILMVEKGVA 335
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 7/217 (3%)
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
R + I ++ +++ + + DV S+S ++ + + +++ M+EKG P
Sbjct: 67 RRRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDS 126
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLY 177
TY ++ LC ++E L+ EM G SP+ TY + GR DA AM +
Sbjct: 127 FTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDA--AMDIL 184
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK--GSELGLDLDSYTMLIHGL 235
+M+ + PN TY LI ++ + +K G+E ++ +YT LIHGL
Sbjct: 185 DEMEHRGI-TPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGL 243
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
C+K ++ ++ EMI G P T+ L GL Q
Sbjct: 244 CQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQ 280
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V +Y SLI G CK+ +D A M+E+GV P+V TY L+ G+C L
Sbjct: 302 DVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLD------ 355
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A + EMR +GI P+ +++ +++ +++A + +L +N MK G+ P Y
Sbjct: 356 ----EALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIY 411
Query: 123 TSVVKCLCS 131
+ K L S
Sbjct: 412 KILFKSLYS 420
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 134/273 (49%), Gaps = 11/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT L+ CK ++D A L M RG+ PN+ TYN L++G+
Sbjct: 365 PDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNL--------- 415
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A ++F+ M G+ P S+ + + Y + P+ +LD MK++GI P++A
Sbjct: 416 -RRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAA 474
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ + L GRI +A+++ ++ G+SP + TYN K Y + A KL +M
Sbjct: 475 CNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEML 534
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P+I N LI R+D +++ +K +L + +Y +LI GL ++ K
Sbjct: 535 SEG-CEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKL 593
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+A F M E G P VTF L L ++D
Sbjct: 594 LKALDLFGSMKESGCPPNTVTFNALLDCLCKND 626
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 149/322 (46%), Gaps = 31/322 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PN+ YT I + RID A L M + G P+VVTY VL++ +C
Sbjct: 260 PNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKEL 319
Query: 52 ----RASLH-PN--------ERFEK--TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
RAS H P+ +F + ++ + EM G PDV +++I++ +
Sbjct: 320 YTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCK 379
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ K + D L+ M+ +GI P + TY +++ L + R+++A EL M GV+P+A +
Sbjct: 380 SGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYS 439
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y F Y D A+ + +MK+ + +P+I N + + R+ ++I+N +
Sbjct: 440 YVLFIDYYGKLGDPEKALDTFEKMKKRGI-MPSIAACNASLYSLAEMGRIREAKDIFNDI 498
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT----FETLYRGLIQ 272
L D +Y M++ + + +A + EM+ +G P + +TLY+
Sbjct: 499 HNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRV 558
Query: 273 SDMLRTWRRLKK-KLDEESITF 293
+ + + RLK KL +T+
Sbjct: 559 DEAWQMFGRLKDLKLAPTVVTY 580
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y L+ G N + A + EM G PN+ TYN+LL+ S +E F
Sbjct: 786 PTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDA--HGKSKRIDELF 843
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +++EM RG +P++ + +I++ +++ +LD + PT T
Sbjct: 844 E--------LYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCT 895
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ L GR E+A ++ EM P+ YN + + N A L+++M
Sbjct: 896 YGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMI 955
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + P++ +Y IL+ R+D + +K + L D SY ++I+GL + ++
Sbjct: 956 KEGI-RPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRL 1014
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+EA F EM +G+ P+ T+ L
Sbjct: 1015 EEALSLFSEMKNRGISPELYTYNAL 1039
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 25/292 (8%)
Query: 3 NVKMYTSLIY-----GWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP 57
N Y LIY G+CK A + MI G++P++ TY+ L+ + RR
Sbjct: 191 NAYSYNGLIYFLLQPGFCK-----EALKVYKRMISEGLKPSMKTYSALMVALGRR----- 240
Query: 58 NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
R TI + + +EM G+ P++ +++I + V RA + + L M+++G P
Sbjct: 241 --RDTGTIMD---LLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGP 295
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V TYT ++ LC+ G+++ A+EL +M + P TY ++ D + +
Sbjct: 296 DVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFW 355
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+M+ D P++ TY IL+ ++D ++ + ++ + +L +Y LI GL
Sbjct: 356 SEMEADGY-APDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLN 414
Query: 238 KQKWKEACQYFVEMIEKGLLPQK---VTFETLYRGLIQSD-MLRTWRRLKKK 285
++ EA + F M G+ P V F Y L + L T+ ++KK+
Sbjct: 415 LRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKR 466
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 26/290 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PN+ Y L+ K RID EM+ RG +PN++T+N++++ + + S++
Sbjct: 821 PNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDL 880
Query: 58 -----NERFEKT----------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ F T A K+F+EM +P+ ++I+++ + +
Sbjct: 881 YYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGK 940
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A ++ D M ++GI P + +YT +V+CL GR++DA E+ G+ P +
Sbjct: 941 AGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVS 1000
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + A+ L+ +MK + P ++TYN LI F +D +++ +
Sbjct: 1001 YNLMINGLGKSRRLEEALSLFSEMKNRGIS-PELYTYNALILHFGNAGMVDQAGKMFEEL 1059
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ L ++ +Y LI G + A F +M+ G P TF L
Sbjct: 1060 QFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 134/297 (45%), Gaps = 27/297 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA----SLH 56
+PN+ Y +LI G + R+D A M GV P +Y + ++ + +L
Sbjct: 399 VPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALD 458
Query: 57 PNERFEK---------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E+ +K IR A+ +F+++ G+ PD ++++++ YS
Sbjct: 459 TFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYS 518
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A + + L M +G P + S++ L GR+++A ++ G + ++P+
Sbjct: 519 KAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVV 578
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN A+ L+ MKE C PN T+N L+ + +D+ +++
Sbjct: 579 TYNILITGLGKEGKLLKALDLFGSMKESG-CPPNTVTFNALLDCLCKNDAVDLALKMFCR 637
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ D+ +Y +I+GL ++ + A ++ +M +K L P VT TL G+++
Sbjct: 638 MTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVK 693
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 23/296 (7%)
Query: 10 LIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
LI CK + A++ + + G P +YN L++G+ L N A
Sbjct: 758 LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGL-----LGCN-----ITEAA 807
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
K+F EM+ G P++ +++++L + ++ + + N M +G P + T+ ++
Sbjct: 808 LKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISA 867
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
L I A +L E++ SP+ TY + AMK++ +M D C P
Sbjct: 868 LVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMP-DYQCKP 926
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
N YNILI F +++ +++ + + DL SYT+L+ L + +A YF
Sbjct: 927 NCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYF 986
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
E+ GL P V++ + GL +S RRL EE+++ SE +N P
Sbjct: 987 EELKLTGLDPDTVSYNLMINGLGKS------RRL-----EEALSLFSEMKNRGISP 1031
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 1/231 (0%)
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
R + + VFD M+ + I + ++ + S + + L M++ G
Sbjct: 133 RVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNA 192
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+Y ++ L G ++A ++ M+ G+ PS +TY+ R+D M L +
Sbjct: 193 YSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEE 252
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ L PNI+TY I I + R+D I ++ G D+ +YT+LI LC
Sbjct: 253 METLGL-RPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAG 311
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
K +A + + +M P VT+ TL L T +R +++ +
Sbjct: 312 KLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 127/309 (41%), Gaps = 47/309 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y LI G K ++ A G M E G PN VT+N LL+ +C+ +
Sbjct: 575 PTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDA------- 627
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+F M + PDV +++ +++ + + + + MK K + P T
Sbjct: 628 ---VDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK-KFLSPDHVT 683
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMV-RNGVSPS----AETYNCFFKEYR----------- 165
+++ + GR+EDA +++ E V ++G+ S E C E
Sbjct: 684 LYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGL 743
Query: 166 --------------------GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+K A A KL+ + + P +YN L+ + N
Sbjct: 744 VCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNI 803
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ +++ +K + ++ +Y +L+ + ++ E + + EM+ +G P +T
Sbjct: 804 TEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNI 863
Query: 266 LYRGLIQSD 274
+ L++S+
Sbjct: 864 IISALVKSN 872
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 149/304 (49%), Gaps = 30/304 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +L GWC++ A L +M E G+ P TYNV+L G R L
Sbjct: 202 PDVVTYNTLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVILKGFFRAGQLQ----- 256
Query: 62 EKTIRNAEKVFDEMRVRG-----IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
+A F +M+ RG +PDV S++ ++H A + + + M ++G
Sbjct: 257 -----HAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCP 311
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
PT+ATY ++++ +C G +EDA + +M+R P+ TY + + AMKL
Sbjct: 312 PTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKL 371
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV-KGSELGLDLDSYTMLIHGL 235
+MK + C P + TYN+LI MD ++ + KG E + D+Y ++I +
Sbjct: 372 MERMKNEG-CEPVVQTYNVLIRYSFEEGEMDKALHLFERMSKGEECLPNQDTYNIVISAM 430
Query: 236 CEKQKWKE---ACQYFVEMIEKGLLPQKVTFETLYRGL-------IQSDMLR---TWRRL 282
+++ ++ A + +EM+E+G LP++ + GL + D+LR +RRL
Sbjct: 431 FVRKRAEDMAIAARMVMEMVERGYLPRRFMLNRVLNGLMLTGNQQLSRDLLRMQEKYRRL 490
Query: 283 KKKL 286
++++
Sbjct: 491 RREI 494
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 4/163 (2%)
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
E+ P V TY ++ C A +LL +M +G++P+ TYN K +
Sbjct: 197 ERRFPPDVVTYNTLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVILKGFFRAGQLQ 256
Query: 172 GAMKLYRQMKE----DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS 227
A + QMK+ D+ C P++ +Y +I ++D R++++ + + +
Sbjct: 257 HAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIAT 316
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
Y LI +C+K ++A F +MI K +P VT+ L RGL
Sbjct: 317 YNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGL 359
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV YT LI G C + +ID A + + M G EP V TYNVL+ R S E
Sbjct: 346 IPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNVLI-----RYSFEEGE- 399
Query: 61 FEKTIRNAEKVFDEMRVRGIE--PDVTSFSIVLH---VYSRAHKPQLSLDKLNFMKEKGI 115
+ A +F+ M +G E P+ +++IV+ V RA ++ + M E+G
Sbjct: 400 ----MDKALHLFERMS-KGEECLPNQDTYNIVISAMFVRKRAEDMAIAARMVMEMVERGY 454
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELL 142
P V+ L G + + +LL
Sbjct: 455 LPRRFMLNRVLNGLMLTGNQQLSRDLL 481
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 150/304 (49%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ +T LI G+C++ I+ A + EM RG++P++V+++ L+ RR +
Sbjct: 259 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD----- 313
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A EMR G+ PD +++V+ + RA +L + M G P V T
Sbjct: 314 -----HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT 368
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC R+ DAE LL EM GV P T+ Y + A++L+ M
Sbjct: 369 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 428
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I TYN LI +D ++W+ + E+ + +Y++LI CEK +
Sbjct: 429 NQRL-RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 487
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL-----DEESITFGSE 296
++A + EMI KG+LP +T+ ++ +G +S + ++ +K+ + IT+ +
Sbjct: 488 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 547
Query: 297 FQNY 300
Y
Sbjct: 548 IHGY 551
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 150/308 (48%), Gaps = 46/308 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT +I G+C+ + A R EM+ G P+VVTYN LLNG+C+
Sbjct: 328 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK--------- 378
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-----------------SRAHKP--- 100
E+ + +AE + +EMR RG+ PD+ +F+ ++H Y ++ +P
Sbjct: 379 -ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 437
Query: 101 -----------QLSLDKLN----FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
Q LDK N M + I P TY+ ++ C G++EDA L EM
Sbjct: 438 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 497
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+ G+ P+ TYN K Y + + K ++M + + P++ TYN LI ++ ++
Sbjct: 498 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVS-PDLITYNTLIHGYIKEDK 556
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
M ++ N ++ ++ D+ +Y MLI+G +EA F +M KG+ P + T+ +
Sbjct: 557 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 616
Query: 266 LYRGLIQS 273
+ G + +
Sbjct: 617 MINGHVTA 624
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 130/258 (50%), Gaps = 11/258 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +T+LI+G+C ++D A + M+ + + P++VTYN L++G+CR+ L
Sbjct: 399 PDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLD----- 453
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++D+M R I P+ ++SI++ + + + + L+ M KGI P + T
Sbjct: 454 -----KANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 508
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++K C G + ++ L +M+ N VSP TYN Y + A KL M+
Sbjct: 509 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 568
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + P++ TYN+LI F + I+ + + D +Y +I+G
Sbjct: 569 KEKV-QPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 627
Query: 242 KEACQYFVEMIEKGLLPQ 259
KEA Q EM+++G P
Sbjct: 628 KEAFQLHDEMLQRGFAPD 645
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 125/260 (48%), Gaps = 11/260 (4%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
+++ +CK D + + EM +R V P+VVT+NV+++ R A
Sbjct: 162 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEA----------AM 211
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+ D M +G++P + +++ VL R+ + + M + G+ P V ++T ++
Sbjct: 212 ALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGF 271
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C G IE+A ++ EM G+ P +++C + R + AM R+M+ L VP+
Sbjct: 272 CRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGL-VPD 330
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
Y ++IG F M + + + G D+ +Y L++GLC++++ +A
Sbjct: 331 GVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLN 390
Query: 250 EMIEKGLLPQKVTFETLYRG 269
EM E+G+ P TF TL G
Sbjct: 391 EMRERGVPPDLCTFTTLIHG 410
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 16/270 (5%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E N T N++++ C+ F+K + V EM R + PDV + ++++
Sbjct: 153 EVNTYTLNIMVHNYCKALE------FDKV----DAVISEMEKRCVFPDVVTHNVMVDARF 202
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
RA + ++ ++ M KG+ P + TY SV+K LC G + A E+ EM GV+P
Sbjct: 203 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 262
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
++ + + A+K+Y++M+ + P++ +++ LIG+F +MD
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGI-KPDLVSFSCLIGLFARRGKMDHAMAYLRE 321
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
++ L D YTM+I G C +A + EM+ G LP VT+ TL GL +
Sbjct: 322 MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 381
Query: 276 LRTWRRLKKKLDEESI-----TFGSEFQNY 300
L L ++ E + TF + Y
Sbjct: 382 LLDAEGLLNEMRERGVPPDLCTFTTLIHGY 411
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 81/153 (52%), Gaps = 10/153 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y S+I G+C+ + ++FL +M+ V P+++TYN L++G + +H
Sbjct: 503 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH---- 558
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A K+ + M ++PDV +++++++ +S Q + M KGI P
Sbjct: 559 ------DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRY 612
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
TY S++ + G ++A +L EM++ G +P
Sbjct: 613 TYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 1/171 (0%)
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
RA P L+ D + T +V C + + ++ EM + V P
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 192
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
T+N DA AM L M L P I TYN ++ D E++
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGL-KPGIVTYNSVLKGLCRSGMWDKAWEVFKE 251
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + D+ S+T+LI G C + +EA + + EM +G+ P V+F L
Sbjct: 252 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL 302
>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 130/269 (48%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT +I G+CK+ I+ A ++LGEM++ G+ P+V TY +L+N C+ +
Sbjct: 389 PDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDM------ 442
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE + M + G+ PDV +F+ ++ + + Q + + L+ M+ G+ P T
Sbjct: 443 ----AMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVT 498
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ L + G +A+++L E++R G+SP T+ + + + A ++ M
Sbjct: 499 YNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMS 558
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + P++ T + L+ + RMD ++ + + L DL Y LIHG C
Sbjct: 559 ERHV-KPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNM 617
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
AC MI+ G LP T G
Sbjct: 618 NAACNLVAMMIDDGFLPNITTHRAFALGF 646
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 14/257 (5%)
Query: 13 GWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
G+CK R D A L V PN+ Y+ + +C+ + + A K F
Sbjct: 333 GYCKKGRSDKAINLLNFF---NVRPNIFVYSSFMTKLCK----------DGNMLEASKTF 379
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
EM G+ PD ++I++ Y + + L M + GI P+V TYT ++ C
Sbjct: 380 QEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKS 439
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G + AE LL M+ G+ P T+NC + + A +L M+ + P+ T
Sbjct: 440 GDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMS-PDTVT 498
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
YN LI +A + ++I + + L D+ ++T +I G +K ++EA + M
Sbjct: 499 YNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMS 558
Query: 253 EKGLLPQKVTFETLYRG 269
E+ + P VT L G
Sbjct: 559 ERHVKPDVVTCSALLNG 575
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + LI G+ K + A L M G+ P+ VTYN L++ + R +PNE
Sbjct: 458 IPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARG--YPNE- 514
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A+ + E+ RG+ PDV +F+ V+ +S+ + + ++M E+ + P V
Sbjct: 515 -------AKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVV 567
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T ++++ C R+++A L +M+ G+ P YN + + N A L M
Sbjct: 568 TCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMM 627
Query: 181 KEDDLCVPNIHTY 193
+D +PNI T+
Sbjct: 628 IDDGF-LPNITTH 639
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 14/269 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + + I +C I + L EM G++ +V+ Y ++++ +C+ +
Sbjct: 253 NASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKIS--------- 303
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++ A + +M GI D S S V+ Y + + +++ LNF + P + Y
Sbjct: 304 -CVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVR---PNIFVY 359
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+S + LC G + +A + EM G+ P Y Y D N A + +M +
Sbjct: 360 SSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLK 419
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ P++ TY +LI M M + + L D+ ++ LI G +K +
Sbjct: 420 FGI-TPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQ 478
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+A + M G+ P VT+ L LI
Sbjct: 479 KAFELLDIMRSAGMSPDTVTYNALIHSLI 507
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 126/309 (40%), Gaps = 27/309 (8%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y+ L+ + +++ +A + E+ + P++ N LL + R L
Sbjct: 186 VYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDL-------- 237
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
A + + M+ G+ + + S+ + Y Q L MK GI V YT V
Sbjct: 238 --AWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIV 295
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYRQMKED 183
+ LC ++ A LL +M+ G+S + + + Y +GR D + + ++
Sbjct: 296 IDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVR-- 353
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQKW 241
PNI Y+ + M + + + SE GL D YT++I G C+
Sbjct: 354 ----PNIFVYSSFMTKLCKDGNMLEASKTFQEM--SEFGLYPDCFCYTIIIGGYCKVGDI 407
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRLKKKLDE----ESITFGSE 296
+A QY EM++ G+ P T+ L +S DM L++ + E + +TF
Sbjct: 408 NKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCL 467
Query: 297 FQNYHFKPY 305
+ K Y
Sbjct: 468 IDGFGKKGY 476
>gi|297599556|ref|NP_001047351.2| Os02g0601600 [Oryza sativa Japonica Group]
gi|255671066|dbj|BAF09265.2| Os02g0601600 [Oryza sativa Japonica Group]
Length = 466
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 18/266 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + ++GWC I RID A + EM RG P+V+TY +L C+
Sbjct: 183 PDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCK---------- 232
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ R +V D M +G P+V ++++++ ++ + + +L + MK G P
Sbjct: 233 QRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLF 292
Query: 122 YTSVVKCLCSCGRIEDAEELLG-EMVRNGVSPSAETYNCFFKE--YRGRKDANGAMKLYR 178
Y S++ L G + +A ++ EM NGVS + TYN Y GR D A+ + +
Sbjct: 293 YNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISIFCYYGRDD--DALNVLK 350
Query: 179 QMKEDDLCVPNIHTYNILIGMFMA-LNRMDMVREIWNHVKGSE-LGLDLDSYTMLIHGLC 236
+M E C P+I +Y L+ +F++ + D VR + + + LGLDLD+YT+LIHGLC
Sbjct: 351 EM-EAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLGLDLDTYTLLIHGLC 409
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVT 262
A Q F EM+ + P+ T
Sbjct: 410 RVGDTVWAYQLFDEMVSSEIAPRSKT 435
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 107/252 (42%), Gaps = 14/252 (5%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75
K+ +ID L +M RG+ VT + + R A + ++ +FD++
Sbjct: 94 KMRQIDQMWELLSDMHGRGL----VTVETVAKSIRRLAG-------ARRWKDVVLLFDKL 142
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
G+E + + +++L V + K +++ + + I P T+ V CS RI
Sbjct: 143 EDMGLERNTETMNVLLDVLCKERKIEVAREVFAVLSPH-IPPDAYTFNIFVHGWCSIRRI 201
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
++A + EM R G PS TY + Y +++ ++ M C PN+ TY +
Sbjct: 202 DEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQG-CHPNVITYTM 260
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF-VEMIEK 254
++ R + + + +K S D Y LI+ L + EA Q F VEM
Sbjct: 261 IMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMN 320
Query: 255 GLLPQKVTFETL 266
G+ T+ T+
Sbjct: 321 GVSHNLATYNTM 332
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
+I+ ELL +M G+ + ET + G + + L+ ++ ED N T
Sbjct: 97 QIDQMWELLSDMHGRGL-VTVETVAKSIRRLAGARRWKDVVLLFDKL-EDMGLERNTETM 154
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N+L+ + ++++ RE++ V + D ++ + +HG C ++ EA EM
Sbjct: 155 NVLLDVLCKERKIEVAREVFA-VLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKR 213
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+G P +T+ T+ + R +RR+ + LD
Sbjct: 214 RGFPPSVITYTTVLEAYCKQ---RNFRRVYEVLDS 245
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 140/280 (50%), Gaps = 8/280 (2%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ + I G C+ +++ AE + +M G+ PNVVTYN L++G C+R S
Sbjct: 199 NLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGS-------A 251
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ AE EM I P+ +F+ ++ + + + M+++G+ P + TY
Sbjct: 252 GKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTY 311
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S++ LC+ G++E+A +L +MV G+ P+ TYN + +K A K++ + +
Sbjct: 312 NSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSK 371
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+L VPN+ T+N +I + M+ + + + + ++ +Y LI GLC KQ +
Sbjct: 372 QEL-VPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQ 430
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
A + EM KGL VT+ L GL ++D R +L
Sbjct: 431 AAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKL 470
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 131/265 (49%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y SLI G C +++ A +M+ G++PN+VTYN L+NG C++
Sbjct: 306 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKK--------- 356
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K ++ A KVFD++ + + P+V +F+ ++ Y + + + M ++GI P V+T
Sbjct: 357 -KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVST 415
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC ++ A+ELL EM G+ TYN + A KL +M
Sbjct: 416 YNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMF 475
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L PN TYN L+ + ++ + ++ ++ +Y +LI G C+ K
Sbjct: 476 NLGL-KPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKL 534
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+ A EM+EKGL P + T++ +
Sbjct: 535 EAANGLLNEMLEKGLNPNRTTYDIV 559
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 143/290 (49%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + +LI G+CK + A++ EM ++G++PN+VTYN L+NG+C N +
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCN------NGKL 324
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ I ++D+M G++P++ +++ +++ + + + + + + ++ + P V T
Sbjct: 325 EEAI----DLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVIT 380
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C G +E+ L M+ G+ P+ TYNC ++D A +L +M+
Sbjct: 381 FNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEME 440
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L ++ TYNILI ++ ++ N + L + +Y L+ G C + K
Sbjct: 441 NKGL-KGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKL 499
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K A M ++ P VT+ L +G + + L L ++ E+ +
Sbjct: 500 KAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGL 549
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 119/233 (51%), Gaps = 4/233 (1%)
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I + E V+ EM R I ++ +F+I ++ RA K + D + MK GI P V T
Sbjct: 178 ENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVT 237
Query: 122 YTSVVKCLC---SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
Y ++V C S G++ AE + EM+ N + P+ T+N + ++ A K +
Sbjct: 238 YNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFE 297
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M++ L PNI TYN LI +++ ++W+ + G L ++ +Y LI+G C+K
Sbjct: 298 EMQKQGL-KPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKK 356
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ KEA + F ++ ++ L+P +TF T+ + M+ L + +E I
Sbjct: 357 KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGI 409
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 130/285 (45%), Gaps = 14/285 (4%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
L+ K N+I E EMI+R + N+ T+N+ +NG+CR L+ AE
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNK----------AE 220
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE---KGICPTVATYTSVV 126
++M+ GI P+V +++ ++ Y + FMKE ICP T+ +++
Sbjct: 221 DAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLI 280
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C + A++ EM + G+ P+ TYN A+ L+ +M L
Sbjct: 281 DGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGL- 339
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PNI TYN LI F M ++++ V EL ++ ++ +I C++ +E
Sbjct: 340 KPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFS 399
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
M+++G+LP T+ L GL + L+ + L +++ + +
Sbjct: 400 LCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGL 444
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 91/158 (57%), Gaps = 10/158 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y LI G C+ + A+ L EM +G++ +VVTYN+L++G+C+ N++
Sbjct: 410 LPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCK------NDK 463
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
RNAEK+ +EM G++P+ +++ ++ Y K + +L+ M+++ P V
Sbjct: 464 S----RNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVV 519
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
TY ++K C ++E A LL EM+ G++P+ TY+
Sbjct: 520 TYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYD 557
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 108/275 (39%), Gaps = 46/275 (16%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQL--SLDKLNFMKEKGICPTVATYTSVVKC 128
VF + + G P T+ I + V + +L + + K+ G ++ + ++
Sbjct: 115 VFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSA 174
Query: 129 LCSCGRIEDAEELLGEMVRN-----------------------------------GVSPS 153
L +I D E + EM++ G+SP+
Sbjct: 175 LVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPN 234
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKE---DDLCVPNIHTYNILIGMFMALNRMDMVR 210
TYN Y R A K MKE + +C PN T+N LI F + +
Sbjct: 235 VVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKIC-PNEVTFNTLIDGFCKDENVAAAK 293
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + ++ L ++ +Y LI+GLC K +EA + +M+ GL P VT+ L G
Sbjct: 294 KAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGF 353
Query: 271 IQSDMLRTWRRL-----KKKLDEESITFGSEFQNY 300
+ M++ ++ K++L ITF + Y
Sbjct: 354 CKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAY 388
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 134/255 (52%), Gaps = 11/255 (4%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
C+ ++ A FLG+M++ G EP++VT+ LL+G C H N I +A +FD+
Sbjct: 128 CRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFC-----HWNR-----IEDALALFDQ 177
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
+ G P+V +++ ++H + +++ N M + GI P V TY S+V LC GR
Sbjct: 178 IVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGR 237
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
DA LL +M++ G+ P+ T+ + A +LY+ M + + P++ TY
Sbjct: 238 WSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSV-YPDVFTYT 296
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
LI R+D R+++ ++ + + +YT LIHG C+ ++ ++ + F EM +K
Sbjct: 297 ALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQK 356
Query: 255 GLLPQKVTFETLYRG 269
GL+ +T+ L +G
Sbjct: 357 GLVANTITYTVLIQG 371
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 147/323 (45%), Gaps = 44/323 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+LI+ CK ++ A +M + G+ PNVVTYN L++G+C
Sbjct: 185 PNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRW------ 238
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A + +M RGI+P+V +F+ ++ + + K + + M + + P V T
Sbjct: 239 ----SDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFT 294
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC+ GR+++A ++ M NG P+ TY + K K++ +M
Sbjct: 295 YTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMS 354
Query: 182 EDDLCV----------------------------------PNIHTYNILIGMFMALNRMD 207
+ L P+I TYN+L+ ++
Sbjct: 355 QKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVE 414
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
I+ +++ E+ +++ +YT++I G+C+ K ++A F + KG+ P +T+ T+
Sbjct: 415 KALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMI 474
Query: 268 RGLIQSDMLRTWRRLKKKLDEES 290
G + + L KK+ E+
Sbjct: 475 SGFCRRGFIHEADALFKKMKEDG 497
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 143/305 (46%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ +T L+ K+ R D+ +M G+ P + T N+++N VCR S P
Sbjct: 79 LPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCR--SSQPCR- 135
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +M G EPD+ +F+ +LH + ++ + +L + + G P V
Sbjct: 136 -------ASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVV 188
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ CLC + A E+ +M NG+ P+ TYN + A L R M
Sbjct: 189 TYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDM 248
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + PN+ T+ LI F+ + ++ +E++ + + D+ +YT LI+GLC +
Sbjct: 249 MKRGI-QPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGR 307
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
EA Q F M G P +VT+ TL G +S + ++ +K L +IT+
Sbjct: 308 LDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTV 367
Query: 296 EFQNY 300
Q Y
Sbjct: 368 LIQGY 372
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 122/259 (47%), Gaps = 11/259 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+LI + K+ +I A+ MI+ V P+V TY L+NG+C L
Sbjct: 255 PNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLD----- 309
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F M G P+ +++ ++H + ++ + + M +KG+ T
Sbjct: 310 -----EARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTIT 364
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ C GR + A+E+ +M P TYN A+ +++ M+
Sbjct: 365 YTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMR 424
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ + NI TY I+I + +++ +++ + + ++ +YT +I G C +
Sbjct: 425 KREMDI-NIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFI 483
Query: 242 KEACQYFVEMIEKGLLPQK 260
EA F +M E G LP +
Sbjct: 484 HEADALFKKMKEDGFLPNE 502
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 103 SLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
+LD M P++ +T ++ + R + L +M G+SP T N
Sbjct: 66 ALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMN 125
Query: 163 EY-RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
R + + L + MK P++ T+ L+ F NR++ +++ + G
Sbjct: 126 CVCRSSQPCRASCFLGKMMKLG--FEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLR 277
++ +YT LIH LC+ + A + F +M + G+ P VT+ +L GL + SD
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243
Query: 278 TWR-RLKKKLDEESITFGS 295
R +K+ + ITF +
Sbjct: 244 LLRDMMKRGIQPNVITFTA 262
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 151/300 (50%), Gaps = 17/300 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + SLI G C + ++A EM E+G +P+ TY++L+ +C
Sbjct: 404 LPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCS--------- 454
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ ++ A + EM + G +V ++ ++ + ++ + D + M+ G+ +
Sbjct: 455 -ERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSV 513
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC R+E+A +L+ +M+ G+ P TY K + + D A + + M
Sbjct: 514 TYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNM 573
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P+I TY LIG R+D+ ++ V+ + L +Y +I LC++++
Sbjct: 574 TLNG-CEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKR 632
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL------IQSDMLRTWRRLKKKLDEESITFG 294
KEA + F EM+EKG P +T++ ++RGL IQ + T L+K + E +FG
Sbjct: 633 TKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFG 692
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 138/276 (50%), Gaps = 19/276 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K +T+L+ G+ + ++ A R M+E G E V+ NVL+NG+C+ + RF
Sbjct: 232 PDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRF 291
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+++E G PD +F+ +++ R + L+ ++FM EKG V T
Sbjct: 292 ---------IYEE---EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYT 339
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC G I++A E+L MV P+ TYN A +L R +
Sbjct: 340 YNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLT 399
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLCEK 238
+ +P++ T+N LI G+ + NR ++ E++ +K E G D D +Y++LI LC +
Sbjct: 400 SKGV-LPDVCTFNSLIQGLCLTSNR-EIAMELFEEMK--EKGCDPDEFTYSILIESLCSE 455
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
++ KEA EM G V + TL GL +++
Sbjct: 456 RRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNN 491
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 129/281 (45%), Gaps = 47/281 (16%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV +Y +LI G CK NR+ AE +M GV + VTYN L+NG+C+
Sbjct: 476 NVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCK----------S 525
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + A ++ D+M + G++PD +++ +L + + + + D + M G P + TY
Sbjct: 526 KRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTY 585
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC GR++ A +LL + G+ + + YN + RK AM+L+R+M E
Sbjct: 586 GTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMME 645
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE-KQKW 241
KG D+ +Y ++ GLC
Sbjct: 646 ----------------------------------KGDP--PDVITYKIVFRGLCNGGGPI 669
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+EA + VEM+EKG+LP+ +F L GL M T +L
Sbjct: 670 QEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQL 710
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 11/297 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y SLI G CK+ ID A L M+ R EPN VTYN L+ +C+ E
Sbjct: 336 DVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCK----------E 385
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A ++ + +G+ PDV +F+ ++ +++++ MKEKG P TY
Sbjct: 386 NHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTY 445
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ +++ LCS R+++A LL EM +G + + YN A ++ QM+
Sbjct: 446 SILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEM 505
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ ++ TYN LI R++ ++ + + L D +YT ++ C++ K
Sbjct: 506 LGVSRSSV-TYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIK 564
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
A M G P VT+ TL GL ++ + +L + + + + + N
Sbjct: 565 RAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYN 621
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 136/309 (44%), Gaps = 32/309 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
P+ + Y + K N++ + E +M+ V P+V T+N+L+ +C+ L P
Sbjct: 162 PDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILM 221
Query: 58 -NERFEKTIRNAEKVF--------DEMRVRG--------IEP--DVTSFSIVLHVYSRAH 98
+ +R EK F +E V G +E ++TS S+ + V
Sbjct: 222 LEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCK 281
Query: 99 KPQLSLDKLNFM-KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ ++ + L F+ +E+G CP T+ ++V LC G I+ E++ M+ G TY
Sbjct: 282 EGRIE-EALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTY 340
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
N + + A+++ M D C PN TYN LIG N ++ E+ +
Sbjct: 341 NSLISGLCKLGEIDEAVEILHHMVSRD-CEPNTVTYNTLIGTLCKENHVEAATELARVLT 399
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+ D+ ++ LI GLC + A + F EM EKG P + T+ L L
Sbjct: 400 SKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLC------ 453
Query: 278 TWRRLKKKL 286
+ RRLK+ L
Sbjct: 454 SERRLKEAL 462
>gi|47848296|dbj|BAD22160.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 454
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 18/266 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + ++GWC I RID A + EM RG P+V+TY +L C+
Sbjct: 171 PDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCK---------- 220
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ R +V D M +G P+V ++++++ ++ + + +L + MK G P
Sbjct: 221 QRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLF 280
Query: 122 YTSVVKCLCSCGRIEDAEELLG-EMVRNGVSPSAETYNCFFKE--YRGRKDANGAMKLYR 178
Y S++ L G + +A ++ EM NGVS + TYN Y GR D A+ + +
Sbjct: 281 YNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISIFCYYGRDD--DALNVLK 338
Query: 179 QMKEDDLCVPNIHTYNILIGMFMA-LNRMDMVREIWNHVKGSE-LGLDLDSYTMLIHGLC 236
+M E C P+I +Y L+ +F++ + D VR + + + LGLDLD+YT+LIHGLC
Sbjct: 339 EM-EAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLGLDLDTYTLLIHGLC 397
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVT 262
A Q F EM+ + P+ T
Sbjct: 398 RVGDTVWAYQLFDEMVSSEIAPRSKT 423
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 107/252 (42%), Gaps = 14/252 (5%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75
K+ +ID L +M RG+ VT + + R A + ++ +FD++
Sbjct: 82 KMRQIDQMWELLSDMHGRGL----VTVETVAKSIRRLAG-------ARRWKDVVLLFDKL 130
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
G+E + + +++L V + K +++ + + I P T+ V CS RI
Sbjct: 131 EDMGLERNTETMNVLLDVLCKERKIEVAREVFAVLSPH-IPPDAYTFNIFVHGWCSIRRI 189
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
++A + EM R G PS TY + Y +++ ++ M C PN+ TY +
Sbjct: 190 DEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQG-CHPNVITYTM 248
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF-VEMIEK 254
++ R + + + +K S D Y LI+ L + EA Q F VEM
Sbjct: 249 IMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMN 308
Query: 255 GLLPQKVTFETL 266
G+ T+ T+
Sbjct: 309 GVSHNLATYNTM 320
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
+I+ ELL +M G+ + ET + G + + L+ ++ ED N T
Sbjct: 85 QIDQMWELLSDMHGRGL-VTVETVAKSIRRLAGARRWKDVVLLFDKL-EDMGLERNTETM 142
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N+L+ + ++++ RE++ V + D ++ + +HG C ++ EA EM
Sbjct: 143 NVLLDVLCKERKIEVAREVFA-VLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKR 201
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+G P +T+ T+ + R +RR+ + LD
Sbjct: 202 RGFPPSVITYTTVLEAYCKQ---RNFRRVYEVLDS 233
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 155/317 (48%), Gaps = 27/317 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRR-----ASL 55
PN Y ++I GWCK+ R+D A + EM+ +G V+P V YN L+ G C + A L
Sbjct: 179 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 238
Query: 56 HPNERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ + E+ + A ++ +EM +G+ PDV +++I+++ +
Sbjct: 239 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 298
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + +L+ M +G+ TV TYT+++ L G++++ ++L E VR G+ P
Sbjct: 299 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 358
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
YN + + + A ++ +M++ + P+ TYN L+ L R+D R++ +
Sbjct: 359 LYNALINSHSTSGNIDRAFEIMGEMEKKRIA-PDDVTYNTLMRGLCLLGRVDEARKLIDE 417
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ + DL +Y LI G K K+A + EM+ KG P +T+ L +GL ++
Sbjct: 418 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 477
Query: 276 LRTWRRLKKKLDEESIT 292
+ K++ E IT
Sbjct: 478 GDDAENMVKEMVENGIT 494
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 46/273 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI G CK + A M RGV VVTY L+ + ++
Sbjct: 285 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ------- 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ +K+FDE RGI PD+ ++ +++ +S + + + + M++K I P T
Sbjct: 338 ---VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 394
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ LC GR+++A +L+ EM G+ P TYN Y + D A+++ +M
Sbjct: 395 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 454
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P + TYN LI GLC+ +
Sbjct: 455 NKGFN-PTLLTYN-----------------------------------ALIQGLCKNGQG 478
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+A EM+E G+ P T+ +L GL D
Sbjct: 479 DDAENMVKEMVENGITPDDSTYISLIEGLTTED 511
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 10/220 (4%)
Query: 53 ASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
ASLHP + D R+R + T+F+I+L A KP +L+ L M
Sbjct: 84 ASLHPLLSALPSAPAFALFADMFRLR-LPLCTTTFNIMLRHLCSAGKPARALELLRQMPR 142
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEM-VRNGVSPSAETYNCFFKEY--RGRKD 169
P TY +V+ CS GR++ A +++ EM R G++P+ TY + GR D
Sbjct: 143 ----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVD 198
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A+K++ +M P YN LIG + ++D + + + + + +Y
Sbjct: 199 E--AVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYN 256
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+L+H L + EA + EM KGL P T+ L G
Sbjct: 257 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILING 296
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 146/294 (49%), Gaps = 28/294 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV------------ 49
PNV +YT+LI G CK + +A+ +M G+ PN TY+VL+NG
Sbjct: 191 PNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250
Query: 50 ---CRRASLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+R+ + PN + + A KVF EMR +GI V +++I++ R
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K ++ ++ + + G+ P + TY ++ C +++ A L ++ +G+SP+ T
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVT 370
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNH 215
YN Y ++ GA+ L ++M+E C+ P+ TY ILI F LN + E+ +
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEER--CIAPSKVTYTILIDAFARLNHTEKACEMHSL 428
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ S L D+ +Y++L+HGLC KEA + F + E L P V + T+ G
Sbjct: 429 MEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHG 482
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 127/263 (48%), Gaps = 11/263 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y LI +C +D A + EM E+G+ V+TYN+L+ G+CR ++
Sbjct: 260 VPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR------GKK 313
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F + ++ KV G+ P++ +++I+++ + K ++ N +K G+ PT+
Sbjct: 314 FGEAVKLVHKV----NKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLV 369
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ + A +L+ EM ++PS TY + A +++ M
Sbjct: 370 TYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLM 429
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L VP+++TY++L+ M +++ + L + Y +IHG C++
Sbjct: 430 EKSGL-VPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGS 488
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
A + EM++ G++P +F
Sbjct: 489 SYRALRLLNEMVQSGMVPNVASF 511
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 46/267 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y LI G+C + ++D A R ++ G+ P +VTYN L+ G + +L
Sbjct: 331 PNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENL------ 384
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + EM R I P +++I++ ++R + + + + + M++ G+ P V T
Sbjct: 385 ----AGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYT 440
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ LC G +++A +L + + P++ YN Y + A++L +M
Sbjct: 441 YSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMV 500
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + VPN+ ++ IG+ LC +KW
Sbjct: 501 QSGM-VPNVASFCSTIGL-----------------------------------LCRDEKW 524
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYR 268
KEA +MI GL P ++ +++
Sbjct: 525 KEAELLLGQMINSGLKPSVSLYKMVHK 551
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 134/291 (46%), Gaps = 20/291 (6%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y +++ + + D A FL MI G P T+N LL + R + F+K
Sbjct: 91 LYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIR------SNYFDK-- 142
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
A +F+E++ + + D SF I++ A L ++E G+ P V YT++
Sbjct: 143 --AWWIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTL 199
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKDANGAMKLYRQMK 181
+ C G + A+ L +M R G+ P+ TY N FFK+ R+ ++Y MK
Sbjct: 200 IDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQRE----GFQMYENMK 255
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ VPN + YN LI + +D +++ ++ + + +Y +LI GLC +K+
Sbjct: 256 RSGI-VPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKF 314
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EA + ++ + GL P VT+ L G + + RL +L ++
Sbjct: 315 GEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLS 365
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 27/295 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNER 60
P+ Y ++I GWCK+ +++ A + EM+ G VEPN V YN L+ G C + +L R
Sbjct: 181 PDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALR 240
Query: 61 F-------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ E A + +EM +G+ PD +++I+++ Y
Sbjct: 241 YRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYC 300
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ K + ++ M KGI TV TYTS++ L G +++ + L + VR G+ P
Sbjct: 301 KEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLF 360
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
YN + D + A ++ +M++ + P+ TYN L+ L R+D R +
Sbjct: 361 MYNALINSHCTGGDMDRAFEIMGEMEKKRI-TPDDVTYNTLMRGLCLLGRLDEARGLIEE 419
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + DL SY LI G K K+A + EM+ KG P +T+ + +GL
Sbjct: 420 MTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGL 474
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 139/312 (44%), Gaps = 24/312 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNER 60
PN Y ++I G+C R+ + EM ERG + P+ TY +++G C+
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGK------ 198
Query: 61 FEKTIRNAEKVFDEMRVRG-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ +A KVFDEM G +EP+ ++ ++ Y +++L M ++G+ TV
Sbjct: 199 ----VEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTV 254
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
ATY V L GR +A L+ EM G++P A TYN Y AMK++
Sbjct: 255 ATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEV 314
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVRE---IWNHVKGSELGLDLDSYTMLIHGLC 236
M + + TY LI AL+ MV+E ++N + DL Y LI+ C
Sbjct: 315 MVGKGIRA-TVVTYTSLI---HALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHC 370
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESI 291
A + EM +K + P VT+ TL RGL L R L K+ + + +
Sbjct: 371 TGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLV 430
Query: 292 TFGSEFQNYHFK 303
++ + Y K
Sbjct: 431 SYNTLISGYSMK 442
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 86/156 (55%), Gaps = 10/156 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ MY +LI C +D A +GEM ++ + P+ VTYN L+ G+C L
Sbjct: 357 PDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLD----- 411
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +EM RGI+PD+ S++ ++ YS + ++ + M KG PT+ T
Sbjct: 412 -----EARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLT 466
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
Y +++K LC G+ DAE+L+ EMV NG++P TY
Sbjct: 467 YNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTY 502
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 75/141 (53%), Gaps = 7/141 (4%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ T+ +++ LC+ G+ A ELL +M SP+A TYN + R +++
Sbjct: 115 STTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAGIEIM 170
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGL 235
R+M+E P+ +TY +I + + +++ ++++ + +E ++ ++ Y LI G
Sbjct: 171 REMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEML-TEGKVEPNAVMYNALIGGY 229
Query: 236 CEKQKWKEACQYFVEMIEKGL 256
C++ + A +Y EM+++G+
Sbjct: 230 CDQGNLEVALRYRGEMVDRGV 250
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 142/285 (49%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +Y ++ G C+ +++ A +M+++ + PNVVTYN L+NG+C+
Sbjct: 42 PDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR------- 94
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A ++F EM +G P S++ ++ + + + D + M P V T
Sbjct: 95 ---IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVT 151
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ L G+++ A E+L MV+ GV+P+ TY+C + + + A KL QM
Sbjct: 152 YTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMV 211
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P + TYNIL+ ++++ +++ + + +Y L+ LC ++
Sbjct: 212 TQGI-APTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQL 270
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A + + EMI KG P +T++TL GL ++ + + L +K+
Sbjct: 271 DGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 132/281 (46%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y ++ CK RID A + EM RG++P+ YN +L+G+C+
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQ---------- 56
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + A +F++M + I P+V +++ +++ +A + + + + M KG PT +
Sbjct: 57 EEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVS 116
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C + A+++ +MVR+ P+ TY A ++ M
Sbjct: 117 YNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMV 176
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN+ TY+ LI F + R+D ++ + + + +Y +L++ LC K
Sbjct: 177 KKGV-TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKL 235
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++A + F M ++ P VT+ TL R L L RL
Sbjct: 236 EDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRL 276
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 119/252 (47%), Gaps = 11/252 (4%)
Query: 31 IERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIV 90
+ R P+ +TY ++ +C+ K I +A +EM RGI+PD ++ V
Sbjct: 1 MARYAPPDALTYGPIVERLCK----------TKRIDDALATVEEMATRGIKPDAFIYNFV 50
Query: 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
L + K + + M ++ I P V TY +++ LC RIE A EL EM G
Sbjct: 51 LSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGY 110
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
P+ +YN + +KD A ++ +M + CVPN+ TY LI ++
Sbjct: 111 VPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSN-CVPNVVTYTTLIDGLSKSGKVQAAA 169
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
E+ + + + ++ +Y+ LI G C+ ++ EA + +M+ +G+ P VT+ L L
Sbjct: 170 EVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSL 229
Query: 271 IQSDMLRTWRRL 282
++D L +L
Sbjct: 230 CRADKLEDAFKL 241
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 10/158 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV YT+LI G K ++ A L M+++GV PNV TY+ L++G C+
Sbjct: 146 VPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK--------- 196
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A K+ ++M +GI P V +++I+L+ RA K + + M ++ PTV
Sbjct: 197 -VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVV 255
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
TY ++++ LC +++ A L EM+ G P A TY+
Sbjct: 256 TYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYD 293
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P Y +LI G+CK + A+ +M+ PNVVTY L++G+ +
Sbjct: 111 VPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGK------ 164
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A +V D M +G+ P+V ++S ++ + + + + L M +GI PTV
Sbjct: 165 ----VQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVV 220
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC ++EDA +L M + P+ TYN + K +GA +LY +M
Sbjct: 221 TYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEM 280
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
C P+ TY+ L ++ +E+ +K
Sbjct: 281 IAKG-CPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 1/176 (0%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P TY +V+ LC RI+DA + EM G+ P A YN + A L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+ +M + + PN+ TYN LI R++ E++ + G SY LI G C
Sbjct: 67 FEKMVKQRI-NPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+K+ A F +M+ +P VT+ TL GL +S ++ + + ++ +T
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVT 181
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 140/288 (48%), Gaps = 11/288 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ Y LI G+C R D + L +MI+R + PNVVT++VL++ + E
Sbjct: 395 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK----------E 444
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+R AE++ EM RGI PD +++ ++ + + + + ++ M KG P + T+
Sbjct: 445 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 504
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ C RI+D EL +M GV TYN + + N A +L+++M
Sbjct: 505 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 564
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ PNI TY IL+ + EI+ ++ S++ LD+ Y ++IHG+C K
Sbjct: 565 RKV-PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 623
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+A F + KG+ P T+ + GL + L L +K++E+
Sbjct: 624 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 671
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 133/269 (49%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ CK + +A L +M ER ++ + V Y+++++G+C+ SL
Sbjct: 324 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD----- 378
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA +F+EM ++GI ++ +++I++ + A + L M ++ I P V T
Sbjct: 379 -----NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 433
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ ++ G++ +AEEL EM+ G++P TY + + A ++ M
Sbjct: 434 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 493
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PNI T+NILI + NR+D E++ + + D +Y LI G CE K
Sbjct: 494 SKG-CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 552
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A + F EM+ + + P VT++ L GL
Sbjct: 553 NVAKELFQEMVSRKVPPNIVTYKILLDGL 581
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 135/268 (50%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV ++ LI + K ++ AE EMI RG+ P+ +TY L++G C+
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK---------- 478
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A ++ D M +G +P++ +F+I+++ Y +A++ L+ M +G+ T
Sbjct: 479 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 538
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ C G++ A+EL EMV V P+ TY ++ A++++ +++
Sbjct: 539 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 598
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + +I YNI+I +++D +++ + + + +Y ++I GLC+K
Sbjct: 599 KSKMEL-DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 657
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA F +M E G P T+ L R
Sbjct: 658 SEAELLFRKMEEDGHAPDGWTYNILIRA 685
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 146/306 (47%), Gaps = 20/306 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +++LI G C R+ A + M+E G +P+++T N L+NG+C
Sbjct: 254 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG-------- 305
Query: 62 EKTIRNAEKVF--DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ AE + D+M G +P+ ++ VL+V ++ + L+++ L M+E+ I
Sbjct: 306 ----KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 361
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y+ ++ LC G +++A L EM G++ + TYN + + KL R
Sbjct: 362 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 421
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + + PN+ T+++LI F+ ++ E+ + + D +YT LI G C++
Sbjct: 422 MIKRKIN-PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 480
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLK-KKLDEESITFG 294
+A Q M+ KG P TF L G ++ D L +R++ + + +++T+
Sbjct: 481 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 540
Query: 295 SEFQNY 300
+ Q +
Sbjct: 541 TLIQGF 546
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 96/175 (54%), Gaps = 10/175 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G+C++ ++++A+ EM+ R V PN+VTY +LL+G+C N EK +
Sbjct: 539 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD------NGESEKAL- 591
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
++F+++ +E D+ ++I++H A K + D + KG+ P V TY ++
Sbjct: 592 ---EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 648
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
LC G + +AE L +M +G +P TYN + + G DA ++KL ++K
Sbjct: 649 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 703
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 130/293 (44%), Gaps = 13/293 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPNE 59
+P V ++ L K + D+ +M +G+ N+ T ++++N CR R
Sbjct: 183 LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFS 242
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
K I+ G EP+ +FS +++ + +L+ ++ M E G P +
Sbjct: 243 AMGKIIK-----------LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL 291
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T ++V LC G+ +A L+ +MV G P+A TY AM+L R+
Sbjct: 292 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 351
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+E ++ + + Y+I+I +D ++N ++ + ++ +Y +LI G C
Sbjct: 352 MEERNIKLDAVK-YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 410
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+W + + +MI++ + P VTF L ++ LR L K++ I
Sbjct: 411 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 463
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 124/280 (44%), Gaps = 16/280 (5%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
+ D A +MI P V+ ++ L + + + ++++ + + +M ++
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAK------TKQYDLVL----ALCKQMELK 215
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI ++ + SI+++ + R K L+ + + + G P T+++++ LC GR+ +A
Sbjct: 216 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 275
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
EL+ MV G P T N AM L +M E C PN TY ++
Sbjct: 276 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG-CQPNAVTYGPVLN 334
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
+ + + E+ ++ + LD Y+++I GLC+ A F EM KG+
Sbjct: 335 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 394
Query: 259 QKVTFETLYRGLIQS----DMLRTWRRL-KKKLDEESITF 293
+T+ L G + D + R + K+K++ +TF
Sbjct: 395 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 434
>gi|125540181|gb|EAY86576.1| hypothetical protein OsI_07956 [Oryza sativa Indica Group]
gi|125582780|gb|EAZ23711.1| hypothetical protein OsJ_07414 [Oryza sativa Japonica Group]
gi|215768726|dbj|BAH00955.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 500
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 18/266 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + ++GWC I RID A + EM RG P+V+TY +L C+
Sbjct: 217 PDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCK---------- 266
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ R +V D M +G P+V ++++++ ++ + + +L + MK G P
Sbjct: 267 QRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLF 326
Query: 122 YTSVVKCLCSCGRIEDAEELLG-EMVRNGVSPSAETYNCFFKE--YRGRKDANGAMKLYR 178
Y S++ L G + +A ++ EM NGVS + TYN Y GR D A+ + +
Sbjct: 327 YNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISIFCYYGRDD--DALNVLK 384
Query: 179 QMKEDDLCVPNIHTYNILIGMFMA-LNRMDMVREIWNHVKGSE-LGLDLDSYTMLIHGLC 236
+M E C P+I +Y L+ +F++ + D VR + + + LGLDLD+YT+LIHGLC
Sbjct: 385 EM-EAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLGLDLDTYTLLIHGLC 443
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVT 262
A Q F EM+ + P+ T
Sbjct: 444 RVGDTVWAYQLFDEMVSSEIAPRSKT 469
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 107/252 (42%), Gaps = 14/252 (5%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75
K+ +ID L +M RG+ VT + + R A + ++ +FD++
Sbjct: 128 KMRQIDQMWELLSDMHGRGL----VTVETVAKSIRRLAG-------ARRWKDVVLLFDKL 176
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
G+E + + +++L V + K +++ + + I P T+ V CS RI
Sbjct: 177 EDMGLERNTETMNVLLDVLCKERKIEVAREVFAVLSPH-IPPDAYTFNIFVHGWCSIRRI 235
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
++A + EM R G PS TY + Y +++ ++ M C PN+ TY +
Sbjct: 236 DEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQG-CHPNVITYTM 294
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF-VEMIEK 254
++ R + + + +K S D Y LI+ L + EA Q F VEM
Sbjct: 295 IMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMN 354
Query: 255 GLLPQKVTFETL 266
G+ T+ T+
Sbjct: 355 GVSHNLATYNTM 366
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
+I+ ELL +M G+ + ET + G + + L+ ++ ED N T
Sbjct: 131 QIDQMWELLSDMHGRGLV-TVETVAKSIRRLAGARRWKDVVLLFDKL-EDMGLERNTETM 188
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N+L+ + ++++ RE++ V + D ++ + +HG C ++ EA EM
Sbjct: 189 NVLLDVLCKERKIEVAREVFA-VLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKR 247
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+G P +T+ T+ + R +RR+ + LD
Sbjct: 248 RGFPPSVITYTTVLEAYCKQ---RNFRRVYEVLDS 279
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 135/302 (44%), Gaps = 11/302 (3%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
MY I K+ + M FL M +RGV PNV YNVL+ G+CR EK I
Sbjct: 178 MYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCR----------EKRI 227
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
R+AEK+FDEM + + +++ ++ Y + + + MKEK + P + T+ S+
Sbjct: 228 RDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSL 287
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ LC ++++A LL EM NG P TY+ F D NGAM+LY Q E +
Sbjct: 288 LSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGI 347
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
+ N +T +IL+ +++ EI + L D Y ++G C +A
Sbjct: 348 RINN-YTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAI 406
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPY 305
M GL P +TF +L + KK+ E+ +T E N Y
Sbjct: 407 LTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGY 466
Query: 306 RR 307
+
Sbjct: 467 GK 468
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 141/291 (48%), Gaps = 12/291 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN ++Y LI G C + ++ A RF EM+ + P +VTYNVL++G+C++ L E
Sbjct: 523 LPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAED 582
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F I ++ G PDV +++ ++ Y+ A L MK GI PTV
Sbjct: 583 FLTQITSS----------GHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVR 632
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ CS IE E+L EM++ + P YN Y + A L++ M
Sbjct: 633 TYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGM 691
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P+ TYN LI ++ ++++ N++K EL D+Y +L+ G C+ +
Sbjct: 692 LDQGI-HPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKD 750
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ A ++ EM+E LP L GL Q L+ + + +++ + I
Sbjct: 751 FSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGI 801
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 137/281 (48%), Gaps = 12/281 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ Y +LI G+ K+ D + L +M E GV+PNVV+Y L+N +C+
Sbjct: 454 PSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCK---------- 503
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I AE V +M RG+ P+ +++++ K + +L + M I PT+ T
Sbjct: 504 DGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVT 563
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G++ +AE+ L ++ +G SP TYN Y + + + LY MK
Sbjct: 564 YNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMK 623
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P + TY+ LI + +++V +++N + L D Y +IH E
Sbjct: 624 NLGI-KPTVRTYHPLIS-GCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNT 681
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++A M+++G+ P K+T+ +L G + L + L
Sbjct: 682 QKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDL 722
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 124/268 (46%), Gaps = 11/268 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++ Y +LI G+CK+ +D A + M E+ V PN++T+N LL+G+C+
Sbjct: 245 SIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKM---------- 294
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ ++ A + EM V G PD ++SI+ R +++ EKGI T
Sbjct: 295 RKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTG 354
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ ++ LC G++E AEE+L + NG+ YN F Y D N A+ +M+
Sbjct: 355 SILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMES 414
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L PN T+N LI F + MD E + + +++Y LI G + +
Sbjct: 415 FGL-RPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFD 473
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGL 270
Q +M E G+ P V++ +L L
Sbjct: 474 RCFQILEQMEEIGVKPNVVSYGSLINCL 501
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 118/264 (44%), Gaps = 11/264 (4%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y + + G+C+I ++ A + M G+ PN +T+N L++ C K +
Sbjct: 388 IYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDM----------KEM 437
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
AE+ +M +G+ P V +++ ++ Y + L M+E G+ P V +Y S+
Sbjct: 438 DKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSL 497
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ CLC G+I +AE +L +M+ GV P+A+ YN A++ + +M ++
Sbjct: 498 INCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEI 557
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
P + TYN+LI ++ + + S D+ +Y LI G +
Sbjct: 558 S-PTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCL 616
Query: 246 QYFVEMIEKGLLPQKVTFETLYRG 269
+ M G+ P T+ L G
Sbjct: 617 GLYETMKNLGIKPTVRTYHPLISG 640
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 127/303 (41%), Gaps = 44/303 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y+ L G + + + A + E+G+ N T ++LLNG+C++
Sbjct: 313 MPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGK------ 366
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ AE++ + G+ D ++ ++ Y R ++ + M+ G+ P
Sbjct: 367 ----VEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSI 422
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ S++ C ++ AEE + +M GV+PS ETYN Y + ++ QM
Sbjct: 423 TFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQM 482
Query: 181 KE-------------------------------DDLC---VPNIHTYNILIGMFMALNRM 206
+E D +C +PN YN+LI + ++
Sbjct: 483 EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKV 542
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ + SE+ L +Y +LI GLC+K K EA + ++ G P +T+ +L
Sbjct: 543 KDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSL 602
Query: 267 YRG 269
G
Sbjct: 603 ISG 605
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 1/246 (0%)
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK +F E+ G D ++ + + ++ ++ L+ M+++G+ P V
Sbjct: 154 EKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFI 213
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC RI DAE++ EM + S TYN Y + + A K+ +MK
Sbjct: 214 YNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMK 273
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + PNI T+N L+ + +M R + ++ + D +Y++L GL
Sbjct: 274 EKSV-APNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG 332
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
A + + + EKG+ T L GL + + + KK E + N
Sbjct: 333 NGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTF 392
Query: 302 FKPYRR 307
Y R
Sbjct: 393 VNGYCR 398
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 103/269 (38%), Gaps = 39/269 (14%)
Query: 44 VLLNGVCRRASLHPNERF---EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP 100
+LL C A+ + + T + +F I +T ++L V ++
Sbjct: 63 ILLQQNCNEAAYSLAKSLILTKSTFSSPSDLFSCFSACSIPLRITLSDMLLSVCCKSKML 122
Query: 101 QLSLDKLNFMKEKGICPTVAT-----------------------------------YTSV 125
+ +++ FM+ G P++ + Y
Sbjct: 123 REAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKA 182
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
++ ++ E L M + GV P+ YN K A K++ +M +L
Sbjct: 183 IQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINL 242
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
V +I TYN LI + + +D ++ +K + ++ ++ L+ GLC+ +K KEA
Sbjct: 243 -VGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEAR 301
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EM G +P T+ L+ GL++ D
Sbjct: 302 SLLKEMEVNGFMPDGYTYSILFDGLLRCD 330
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 150/304 (49%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ +T LI G+C++ I+ A + EM RG++P++V+++ L+ RR +
Sbjct: 198 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD----- 252
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A EMR G+ PD +++V+ + RA +L + M G P V T
Sbjct: 253 -----HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT 307
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC R+ DAE LL EM GV P T+ Y + A++L+ M
Sbjct: 308 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 367
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I TYN LI +D ++W+ + E+ + +Y++LI CEK +
Sbjct: 368 NQRL-RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 426
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL-----DEESITFGSE 296
++A + EMI KG+LP +T+ ++ +G +S + ++ +K+ + IT+ +
Sbjct: 427 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 486
Query: 297 FQNY 300
Y
Sbjct: 487 IHGY 490
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 150/308 (48%), Gaps = 46/308 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT +I G+C+ + A R EM+ G P+VVTYN LLNG+C+
Sbjct: 267 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK--------- 317
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-----------------SRAHKP--- 100
E+ + +AE + +EMR RG+ PD+ +F+ ++H Y ++ +P
Sbjct: 318 -ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 376
Query: 101 -----------QLSLDKLN----FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
Q LDK N M + I P TY+ ++ C G++EDA L EM
Sbjct: 377 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 436
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+ G+ P+ TYN K Y + + K ++M + + P++ TYN LI ++ ++
Sbjct: 437 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVS-PDLITYNTLIHGYIKEDK 495
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
M ++ N ++ ++ D+ +Y MLI+G +EA F +M KG+ P + T+ +
Sbjct: 496 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 555
Query: 266 LYRGLIQS 273
+ G + +
Sbjct: 556 MINGHVTA 563
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 129/254 (50%), Gaps = 11/254 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +T+LI+G+C ++D A + M+ + + P++VTYN L++G+CR+ L
Sbjct: 338 PDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLD----- 392
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++D+M R I P+ ++SI++ + + + + L+ M KGI P + T
Sbjct: 393 -----KANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 447
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++K C G + ++ L +M+ N VSP TYN Y + A KL M+
Sbjct: 448 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 507
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + P++ TYN+LI F + I+ + + D +Y +I+G
Sbjct: 508 KEKV-QPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 566
Query: 242 KEACQYFVEMIEKG 255
KEA Q EM+++G
Sbjct: 567 KEAFQLHDEMLQRG 580
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 125/260 (48%), Gaps = 11/260 (4%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
+++ +CK D + + EM +R V P+VVT+NV+++ R A
Sbjct: 101 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEA----------AM 150
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+ D M +G++P + +++ VL R+ + + M + G+ P V ++T ++
Sbjct: 151 ALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGF 210
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C G IE+A ++ EM G+ P +++C + R + AM R+M+ L VP+
Sbjct: 211 CRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGL-VPD 269
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
Y ++IG F M + + + G D+ +Y L++GLC++++ +A
Sbjct: 270 GVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLN 329
Query: 250 EMIEKGLLPQKVTFETLYRG 269
EM E+G+ P TF TL G
Sbjct: 330 EMRERGVPPDLCTFTTLIHG 349
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 11/256 (4%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E N T N++++ C+ F+K + V EM R + PDV + ++++
Sbjct: 92 EVNTYTLNIMVHNYCKAL------EFDKV----DAVISEMEKRCVFPDVVTHNVMVDARF 141
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
RA + ++ ++ M KG+ P + TY SV+K LC G + A E+ EM GV+P
Sbjct: 142 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 201
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
++ + + A+K+Y++M+ + P++ +++ LIG+F +MD
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGI-KPDLVSFSCLIGLFARRGKMDHAMAYLRE 260
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
++ L D YTM+I G C +A + EM+ G LP VT+ TL GL +
Sbjct: 261 MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 320
Query: 276 LRTWRRLKKKLDEESI 291
L L ++ E +
Sbjct: 321 LLDAEGLLNEMRERGV 336
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y S+I G+C+ + ++FL +M+ V P+++TYN L++G + +H
Sbjct: 442 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH---- 497
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A K+ + M ++PDV +++++++ +S Q + M KGI P
Sbjct: 498 ------DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRY 551
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
TY S++ + G ++A +L EM++ G
Sbjct: 552 TYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 1/171 (0%)
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
RA P L+ D + T +V C + + ++ EM + V P
Sbjct: 72 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 131
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
T+N DA AM L M L P I TYN ++ D E++
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKGL-KPGIVTYNSVLKGLCRSGMWDKAWEVFKE 190
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + D+ S+T+LI G C + +EA + + EM +G+ P V+F L
Sbjct: 191 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL 241
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 135/284 (47%), Gaps = 12/284 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y SLI G C + + + EMI RG++ +V + VL++G+C+ L
Sbjct: 218 PNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGML------ 271
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++FDEM RG EP++ + + ++ Y ++ + + + E G V T
Sbjct: 272 ----VEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWT 327
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + C GR+ DA + EM R GV P+ TYN + +GA ++ + M
Sbjct: 328 YNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMH 387
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I T IL+ R+D ++N + S L D+ SYT+LIHG C ++
Sbjct: 388 RSGL-TPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRM 446
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKK 284
EA +M K L+P VT+ L GL +S + WR L +
Sbjct: 447 GEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNE 490
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 135/291 (46%), Gaps = 21/291 (7%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V ++T LI G CK + A EM+ RG EPN+VT L+ G C + +
Sbjct: 254 SVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGN-------- 305
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A ++FD + G + DV ++++ +H Y + + + ++ + M +G+ P + TY
Sbjct: 306 --VDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTY 363
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S++ CLC G + A E++ M R+G++P T K + A+ L+ Q+ E
Sbjct: 364 NSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVE 423
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L P++ +Y ILI RM + + L + +Y+ LI GLC +
Sbjct: 424 SGL-TPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRIS 482
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
A + EM KG LP +T+ L L W+ K+ LDE F
Sbjct: 483 NAWRLLNEMHVKGPLPDTITYSILLDAL--------WK--KQHLDEAVFLF 523
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 129/271 (47%), Gaps = 11/271 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y I+G+CK+ R+ A R EM GV PN+VTYN L++ +C+
Sbjct: 324 DVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGE-------- 375
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A ++ M G+ PD+ + I+L ++ + ++ N + E G+ P V +Y
Sbjct: 376 --VSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSY 433
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++ C+ R+ +A LL +M + P TY+C + A +L +M
Sbjct: 434 TILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHV 493
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+P+ TY+IL+ +D ++N + L D+ YT++I G C+ ++
Sbjct: 494 KGP-LPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERID 552
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA F EM K L+P VT+ L+ + +S
Sbjct: 553 EAINLFREMHMKNLVPDIVTYTILFNAVFKS 583
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 134/275 (48%), Gaps = 15/275 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ T+L+ G+C +DMA + E G + +V TYNV ++G C+
Sbjct: 288 PNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGR------- 340
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+R+A +VFDEM G+ P++ +++ ++ +A + + + + M G+ P + T
Sbjct: 341 ---VRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVT 397
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ LC R++ A L ++V +G++P +Y + AM L R M
Sbjct: 398 CCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMH 457
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWN--HVKGSELGLDLDSYTMLIHGLCEKQ 239
+L VP+I TY+ LI R+ + N HVKG D +Y++L+ L +KQ
Sbjct: 458 LKNL-VPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPL--PDTITYSILLDALWKKQ 514
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA F +MI++GL P + + + G +S+
Sbjct: 515 HLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSE 549
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 132/288 (45%), Gaps = 11/288 (3%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
+++ G C + A F E++ G N V+Y +L+NG+C ++ + I
Sbjct: 112 TVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKE 171
Query: 69 EKVF-DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
++ D V+G +V +SIV+ R + N M G+CP TY S+++
Sbjct: 172 KEKEKDGFFVKG---NVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIR 228
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL-- 185
LC G+ + L+ EM+R G+ S + NG + R+M ++ +
Sbjct: 229 GLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLC----KNGMLVEAREMFDEMVNR 284
Query: 186 -CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
PNI T L+G + +DM RE+++ + D+ +Y + IHG C+ + ++A
Sbjct: 285 GYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDA 344
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ F EM +G++P VT+ +L L ++ + + K + +T
Sbjct: 345 VRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLT 392
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y+ LI G C+ RI A R L EM +G P+ +TY++LL+ + ++ L
Sbjct: 462 VPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLD---- 517
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +F++M RG+EPDV ++I++ Y ++ + +++ M K + P +
Sbjct: 518 ------EAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIV 571
Query: 121 TYT 123
TYT
Sbjct: 572 TYT 574
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 8/172 (4%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
TVA T V+K LC G + A E E+V NG S + +Y N A+ L
Sbjct: 107 TVALNT-VLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLL 165
Query: 178 RQMKE------DDLCVP-NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
R +++ D V N+ Y+I+I +D E +N + G+ + + +Y
Sbjct: 166 RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGS 225
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
LI GLC K+ E EMI +GL F L GL ++ ML R +
Sbjct: 226 LIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREM 277
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT +I G+CK RID A EM + + P++VTY +L N V + S +F
Sbjct: 533 PDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKF 592
Query: 62 EKTIRN 67
IR+
Sbjct: 593 VNVIRD 598
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 140/288 (48%), Gaps = 11/288 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ Y LI G+C R D + L +MI+R + PNVVT++VL++ + E
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK----------E 346
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+R AE++ EM RGI PD +++ ++ + + + + ++ M KG P + T+
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ C RI+D EL +M GV TYN + + N A +L+++M
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ PNI TY IL+ + EI+ ++ S++ LD+ Y ++IHG+C K
Sbjct: 467 RKV-PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+A F + KG+ P T+ + GL + L L +K++E+
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 133/269 (49%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ CK + +A L +M ER ++ + V Y+++++G+C+ SL
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD----- 280
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA +F+EM ++GI ++ +++I++ + A + L M ++ I P V T
Sbjct: 281 -----NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ ++ G++ +AEEL EM+ G++P TY + + A ++ M
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PNI T+NILI + NR+D E++ + + D +Y LI G CE K
Sbjct: 396 SKG-CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A + F EM+ + + P VT++ L GL
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 135/268 (50%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV ++ LI + K ++ AE EMI RG+ P+ +TY L++G C+
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK---------- 380
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A ++ D M +G +P++ +F+I+++ Y +A++ L+ M +G+ T
Sbjct: 381 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ C G++ A+EL EMV V P+ TY ++ A++++ +++
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + +I YNI+I +++D +++ + + + +Y ++I GLC+K
Sbjct: 501 KSKMEL-DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA F +M E G P T+ L R
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRA 587
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 151/306 (49%), Gaps = 20/306 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +++LI G C R+ A + M+E G +P+++T N L+NG+C L E
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC----LSGKEA- 210
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + D+M G +P+ ++ VL+V ++ + L+++ L M+E+ I
Sbjct: 211 -----EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYRQ 179
Y+ ++ LC G +++A L EM G++ + TYN + GR D +GA KL R
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD-DGA-KLLRD 323
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + + PN+ T+++LI F+ ++ E+ + + D +YT LI G C++
Sbjct: 324 MIKRKI-NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 382
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLK-KKLDEESITFG 294
+A Q M+ KG P TF L G ++ D L +R++ + + +++T+
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 295 SEFQNY 300
+ Q +
Sbjct: 443 TLIQGF 448
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 96/175 (54%), Gaps = 10/175 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G+C++ ++++A+ EM+ R V PN+VTY +LL+G+C N EK
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC------DNGESEK--- 491
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++F+++ +E D+ ++I++H A K + D + KG+ P V TY ++
Sbjct: 492 -ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
LC G + +AE L +M +G +P TYN + + G DA ++KL ++K
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 136/306 (44%), Gaps = 18/306 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPNE 59
+P V ++ L K + D+ +M +G+ N+ T ++++N CR R
Sbjct: 85 LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFS 144
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
K I+ G EP+ +FS +++ + +L+ ++ M E G P +
Sbjct: 145 AMGKIIK-----------LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL 193
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T ++V LC G+ +A L+ +MV G P+A TY AM+L R+
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+E ++ + + Y+I+I +D ++N ++ + ++ +Y +LI G C
Sbjct: 254 MEERNIKLDAVK-YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 312
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL-----DEESITFG 294
+W + + +MI++ + P VTF L ++ LR L K++ ++IT+
Sbjct: 313 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 372
Query: 295 SEFQNY 300
S +
Sbjct: 373 SLIDGF 378
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 132/264 (50%), Gaps = 14/264 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +I G CK+ + A L I +G P++ T+N L++G C+R +
Sbjct: 396 PDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMD----- 450
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA + D M G+ PDV +++ +L+ +A KP+ ++ + EKG P + T
Sbjct: 451 -----NAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIIT 505
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC ++ +A +LL E+ G+ P ++ + D + A +L+R+M+
Sbjct: 506 YNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRME 565
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT--MLIHGLCEKQ 239
+ + TYNI+I F MDM +++++ + + G D DSYT ++I G C+
Sbjct: 566 QQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEM--GDKGCDPDSYTYRVMIDGFCKVG 623
Query: 240 KWKEACQYFVEMIEKGLLPQKVTF 263
+ ++ IE G +P TF
Sbjct: 624 NVNSGYDFLLKEIEIGFVPSLTTF 647
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 139/288 (48%), Gaps = 8/288 (2%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + L++ CK + E+ L ++++ GV PN+ T+N+ + G+CR+ L E
Sbjct: 214 PHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVL---EGA 270
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ AE +M +G+EPD +++ +++ YS+ K Q + L K KG P T
Sbjct: 271 NSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFT 330
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ +C G I+ A L E + G+ PS YN K + A++L M
Sbjct: 331 YCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMS 390
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + P+I TYN++I + + + N D+ ++ LI G C++ K
Sbjct: 391 KEGMS-PDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKM 449
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK 285
A M G+ P +T+ ++ GL ++ D++ T++ + +K
Sbjct: 450 DNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEK 497
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 137/288 (47%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y ++IYG+ K+ +I A R L + +G P+ TY L+ GVC+
Sbjct: 291 PDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQ---------- 340
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I +A +F+E +G++P + ++ ++ S+ +L +N M ++G+ P + T
Sbjct: 341 DGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWT 400
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V+ LC G + DA LL + G P T+N Y R + A+ + M
Sbjct: 401 YNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMW 460
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P++ TYN ++ + + V E + + ++ +Y +LI LC+ +K
Sbjct: 461 SHGV-TPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKV 519
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
EA E+ +GL+P V+F T+ G + L +L ++++++
Sbjct: 520 TEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQ 567
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 135/265 (50%), Gaps = 16/265 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ + +LI G+CK ++D A L M GV P+V+TYN +LNG+C+ A P +
Sbjct: 430 LPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAK--PEDV 487
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E F + +G P++ +++I++ +A K +LD L ++ +G+ P
Sbjct: 488 ME--------TFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPV 539
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
++ +V+ C+ G +++A +L M + + + TYN + + D + A KL+ +
Sbjct: 540 SFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHE 599
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCE 237
M D C P+ +TY ++I F + ++ + +K E+G L ++ +I+ LC
Sbjct: 600 MG-DKGCDPDSYTYRVMIDGFCKVGNVNSGYDFL--LKEIEIGFVPSLTTFGRVINCLCV 656
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVT 262
+ + EA M+ G++P+ V
Sbjct: 657 QHRVHEAVGIVHLMVRTGVVPEAVV 681
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 11/251 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y SLI G C+ ID A E + +G++P++V YN L+ G+ ++
Sbjct: 325 VPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQG------- 377
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++ ++M G+ PD+ ++++V++ + + + LN KG P +
Sbjct: 378 ---LVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIF 434
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ +++ C ++++A +L M +GV+P TYN M+ ++ +
Sbjct: 435 TFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMI 494
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E C+PNI TYNILI ++ ++ ++ L D S+ +I G C
Sbjct: 495 MEKG-CLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGD 553
Query: 241 WKEACQYFVEM 251
EA Q F M
Sbjct: 554 LDEAYQLFRRM 564
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 134/328 (40%), Gaps = 51/328 (15%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y S + + + ++ A M EP++ +YN ++N + +
Sbjct: 78 VYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFN--------- 128
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG----------- 114
A KV+ M+ GI PDV +F+I + + R +P +L LN M +G
Sbjct: 129 -QAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTV 187
Query: 115 ------------------------ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
I P +AT+ ++ LC G +++ E+LL ++++NGV
Sbjct: 188 ISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGV 247
Query: 151 SPSAETYNCFFKEYRGRKDANGA------MKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
P+ T+N F + + GA + Y + P+ TYN +I + +
Sbjct: 248 CPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVG 307
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
++ I K D +Y LI G+C+ A F E + KGL P V +
Sbjct: 308 KIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYN 367
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDEESIT 292
TL +GL Q ++ +L + +E ++
Sbjct: 368 TLIKGLSQQGLVLKALQLMNDMSKEGMS 395
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 117/277 (42%), Gaps = 29/277 (10%)
Query: 21 DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80
D ER L EM + N LL GV S N + ++ A VF+ M
Sbjct: 57 DAMERVLMEM-------RLNVDNSLLEGV--YVSAMRNYGRKGKVQEAVDVFERMDFYNC 107
Query: 81 EPDVTSFSIVLHV------YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
EP + S++ ++++ +++AHK L MK +GI P V T+T +K C R
Sbjct: 108 EPSIFSYNAIMNILVEYGYFNQAHKVYLR------MKHEGIAPDVCTFTIRIKSFCRTKR 161
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
A LL M G +A Y + A +L+ +M + P+I T+N
Sbjct: 162 PLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGI-FPHIATFN 220
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK-------QKWKEACQY 247
L+ + + ++ N V + + +L ++ + I GLC K K EA Y
Sbjct: 221 KLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENY 280
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
+M+ KGL P T+ T+ G + ++ R+ K
Sbjct: 281 LHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILK 317
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 142/285 (49%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +Y ++ G C+ +++ A +M+++ + PNVVTYN L+NG+C+
Sbjct: 147 PDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR------- 199
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A ++F EM +G P S++ ++ + + + D + M P V T
Sbjct: 200 ---IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVT 256
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ L G+++ A E+L MV+ GV+P+ TY+C + + + A KL QM
Sbjct: 257 YTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMV 316
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P + TYNIL+ ++++ +++ + + +Y L+ LC ++
Sbjct: 317 TQGI-APTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQL 375
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A + + EMI KG P +T++TL GL ++ + + L +K+
Sbjct: 376 DGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 133/270 (49%), Gaps = 12/270 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+++I CK+NR++ A R L E + R P+ +TY ++ +C+ K I
Sbjct: 83 YSTIINWLCKLNRVEEA-RELIEKMARYAPPDALTYGPIVERLCK----------TKRID 131
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A +EM RGI+PD ++ VL + K + + M ++ I P V TY +++
Sbjct: 132 DALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLI 191
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC RIE A EL EM G P+ +YN + +KD A ++ +M + C
Sbjct: 192 NGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSN-C 250
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VPN+ TY LI ++ E+ + + + ++ +Y+ LI G C+ ++ EA +
Sbjct: 251 VPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHK 310
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+M+ +G+ P VT+ L L ++D L
Sbjct: 311 LLEQMVTQGIAPTVVTYNILLNSLCRADKL 340
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 132/281 (46%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y ++ CK RID A + EM RG++P+ YN +L+G+C+
Sbjct: 112 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQ---------- 161
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + A +F++M + I P+V +++ +++ +A + + + + M KG PT +
Sbjct: 162 EEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVS 221
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C + A+++ +MVR+ P+ TY A ++ M
Sbjct: 222 YNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMV 281
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN+ TY+ LI F + R+D ++ + + + +Y +L++ LC K
Sbjct: 282 KKGV-TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKL 340
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++A + F M ++ P VT+ TL R L L RL
Sbjct: 341 EDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRL 381
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 10/158 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV YT+LI G K ++ A L M+++GV PNV TY+ L++G C+
Sbjct: 251 VPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK--------- 301
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A K+ ++M +GI P V +++I+L+ RA K + + M ++ PTV
Sbjct: 302 -VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVV 360
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
TY ++++ LC +++ A L EM+ G P A TY+
Sbjct: 361 TYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYD 398
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P Y +LI G+CK + A+ +M+ PNVVTY L++G+ +
Sbjct: 216 VPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGK------ 269
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A +V D M +G+ P+V ++S ++ + + + + L M +GI PTV
Sbjct: 270 ----VQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVV 325
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC ++EDA +L M + P+ TYN + K +GA +LY +M
Sbjct: 326 TYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEM 385
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
C P+ TY+ L ++ +E+ +K
Sbjct: 386 IAKG-CPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 126/292 (43%), Gaps = 12/292 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + ++ G+ K R++ + M+E G Y +L++ +C+ +
Sbjct: 7 IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFD---- 62
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+ MR++ + ++S +++ + ++ + + + + M P
Sbjct: 63 ------EAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDAL 115
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +V+ LC RI+DA + EM G+ P A YN + A L+ +M
Sbjct: 116 TYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKM 175
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + PN+ TYN LI R++ E++ + G SY LI G C+K+
Sbjct: 176 VKQRIN-PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 234
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A F +M+ +P VT+ TL GL +S ++ + + ++ +T
Sbjct: 235 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVT 286
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 2/212 (0%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
M +R + P +F+ V +++A + + + M E G + Y ++ CLC G
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
++A +LL M A Y+ A +L +M P+ TY
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMAR--YAPPDALTYG 118
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
++ R+D + + D Y ++ GLC+++K +EA F +M+++
Sbjct: 119 PIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQ 178
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ P VT+ TL GL ++ + T L K++
Sbjct: 179 RINPNVVTYNTLINGLCKAWRIETAYELFKEM 210
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 139/280 (49%), Gaps = 14/280 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT++I+G+ K + + A EM++RG+ P+VVT N +++G+C+ ++
Sbjct: 119 PNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMD----- 173
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE+V +M + I PD T+++ ++H Y + + + ++ L M G P T
Sbjct: 174 -----KAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVT 228
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ CLC G +A E+L M+++ +P+ TY Y + D L M
Sbjct: 229 YSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMV 288
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + P+ H +NI I ++ R+D +N ++ L D+ SY +I GLC+ +
Sbjct: 289 QNGV-RPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRL 347
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 281
A F +MI+ GL P V F L G M W +
Sbjct: 348 DAAMSQFCQMIDDGLSPDIVVFTNLIHGF---SMYGKWEK 384
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 132/297 (44%), Gaps = 26/297 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------- 51
MP+ Y SL++G+ ++ A R L +M G PN VTY++L++ +C+
Sbjct: 188 MPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEARE 247
Query: 52 ------RASLHPNERFEKTIRNA----------EKVFDEMRVRGIEPDVTSFSIVLHVYS 95
++ +PN + + + D M G+ PD F+I ++ Y
Sbjct: 248 ILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYV 307
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + ++ N M+++G+ P + +Y +++ LC GR++ A +M+ +G+SP
Sbjct: 308 KCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIV 367
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+ + A +L+ +M + + P + + +I ++ + +++
Sbjct: 368 VFTNLIHGFSMYGKWEKAEELFYEMMDRGI-RPTVVVFTTMIDKLFKEGKVTEAKTLFDL 426
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ + + ++ SY +IHG K E + +M+ GL P VTF TL ++
Sbjct: 427 MPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLS 483
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 136/327 (41%), Gaps = 34/327 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RRASLHPN- 58
P YT LI C + +++A LG++I+ G+ N +++ +L +C +R S N
Sbjct: 11 PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI 70
Query: 59 ------------ERFEKTI--------RNAEKVFDEMRVRG-----IEPDVTSFSIVLHV 93
+ F T+ + E+ D + + P+V S++ V+H
Sbjct: 71 VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHG 130
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ + + + M ++GI P V T S++ LC ++ AEE+L +M + P
Sbjct: 131 FFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPD 190
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
TYN Y A+++ +QM PN TY++LI REI
Sbjct: 191 CTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQ-PPNGVTYSMLIDCLCKFGGHTEAREIL 249
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET-LYR---- 268
N + S ++ +Y L+HG K E M++ G+ P F +Y
Sbjct: 250 NSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKC 309
Query: 269 GLIQSDMLRTWRRLKKKLDEESITFGS 295
G + ML + ++ L + I++G+
Sbjct: 310 GRLDEAMLTFNKMRQQGLMPDIISYGT 336
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 115/261 (44%), Gaps = 27/261 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ ++ IY + K R+D A +M ++G+ P++++Y +++G+C+ L
Sbjct: 294 PDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDA---- 349
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A F +M G+ PD+ F+ ++H +S K + + + M ++GI PTV
Sbjct: 350 ------AMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVV 403
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ L G++ +A+ L M V P+ +YN Y + +KL M
Sbjct: 404 FTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDML 463
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L PN T+N L+ +++ L D+ + LI CE +
Sbjct: 464 SVGL-KPNAVTFNTLLDDMLSMG----------------LKPDVATCNTLIDSCCEDGRI 506
Query: 242 KEACQYFVEMIEKGLLPQKVT 262
++ F EM+ K VT
Sbjct: 507 EDVLTLFREMLSKAAKTDTVT 527
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 29/176 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++T+LI+G+ + + AE EM++RG+ P VV + +++ + +
Sbjct: 364 PDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFK---------- 413
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK---------PQLSLDK------ 106
E + A+ +FD M + ++P+V S++ ++H Y A K LS+
Sbjct: 414 EGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVT 473
Query: 107 ----LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
L+ M G+ P VAT +++ C GRIED L EM+ T N
Sbjct: 474 FNTLLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTEN 529
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
K + PT TYT ++ C C G + A LG++++ G+ +A ++ + K +
Sbjct: 6 SKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTS 65
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFM-------ALNRMDMVREIWNHVKGSELGLD 224
AM + + C P++ +Y +L+ A++ + M+ E +H + +
Sbjct: 66 DAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVV--- 122
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
SYT +IHG ++ + +A F EM+++G+ P VT ++ GL + + + +
Sbjct: 123 --SYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLR 180
Query: 285 KLDEESI 291
++ ++ I
Sbjct: 181 QMFDKHI 187
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
+ + P +++I++ L+ L + + G+ ++T +++ LC+ R D
Sbjct: 7 KKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSD 66
Query: 138 AEELLGEMV-RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED-DLCVPNIHTYNI 195
A ++ + G +P +Y K K A+ L M ED D C PN+ +Y
Sbjct: 67 AMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTT 126
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
+I F + + ++ + + D+ + +I GLC+ Q +A + +M +K
Sbjct: 127 VIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKH 186
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
++P T+ +L G + S L+ R+ K++
Sbjct: 187 IMPDCTTYNSLVHGYLSSGQLKEAVRILKQM 217
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 143/291 (49%), Gaps = 12/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + L+ CK RI A+ M++RG +P++VTYN L+ G C
Sbjct: 263 PDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFC----------L 312
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++F+ M RG+EPDV +++++++ Y + ++ ++ K + P +AT
Sbjct: 313 SNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLAT 372
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR+ +EL+ EM G SP TYN F + K A+ L+RQ+
Sbjct: 373 YNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV 432
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ + Y++++ F ++ + E H+ ++ +YT++I+ LC+ +
Sbjct: 433 QG--IWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSF 490
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EA +M + P VTFET+ L + + +L+ ++ E +
Sbjct: 491 DEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLV 541
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 132/297 (44%), Gaps = 32/297 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
P++ T LI +C + A LG +++ G +PN+VT+N L+NG C
Sbjct: 88 PSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAF 147
Query: 53 -----ASLHPNERFE-----------KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
A +P + F R+A ++ +M + P++ ++S V+ +
Sbjct: 148 RLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCK 207
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L + + +GI V Y S++ CS G+ +A LL MVR ++P T
Sbjct: 208 DRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYT 267
Query: 157 YNCFFKEY--RGR-KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
+N GR +A G + + E P+I TYN L+ F N + RE++
Sbjct: 268 FNILVDALCKEGRIVEAQGVFAVMMKRGEK----PDIVTYNALMEGFCLSNNVSEARELF 323
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
N + L D+ +Y +LI+G C+ EA F E+ K L+P T+ +L GL
Sbjct: 324 NRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGL 380
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y SLI G CK+ R+ + + EM +RG P++VTYN+ L+ C+ ++
Sbjct: 367 VPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCK------SKP 420
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+EK I ++ V+GI PD + +++ + + K +++ + L + G CP V
Sbjct: 421 YEKAISLFRQI-----VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVR 475
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ LC ++A LL +M N P A T+ + R + + A KL +M
Sbjct: 476 TYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEM 535
Query: 181 KEDDL 185
E L
Sbjct: 536 IERGL 540
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 38/251 (15%)
Query: 55 LHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG 114
LHP +F T+ + F+ M + P + F +L R ++ + + KG
Sbjct: 28 LHP-PKFH-TVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKG 85
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF-------------- 160
I P++AT T ++ C C + A LLG +++ G P+ T+N
Sbjct: 86 ITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAM 145
Query: 161 ------------FKEYRGRKDANG---------AMKLYRQMKEDDLCVPNIHTYNILIGM 199
E+ NG A++L ++M E+DL PN+ TY+ +I
Sbjct: 146 AFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKM-EEDLVRPNLITYSTVIDG 204
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ +++ V + +D+ +Y LIHG C +W+EA + M+ + P
Sbjct: 205 LCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPD 264
Query: 260 KVTFETLYRGL 270
TF L L
Sbjct: 265 DYTFNILVDAL 275
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV--CRRASLHPNE 59
PN++ YT L+ GWC+I + A R EMI++G +P+++ ++ +L G+ C++ S
Sbjct: 370 PNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKS----- 424
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+A K+F+ M+ +G P+V +++I++ + K + +++ + M + G P
Sbjct: 425 -------DAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDA 477
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
A YT ++ + +++ LL EM G TYN K R+ + A+++Y++
Sbjct: 478 AVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKK 537
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M ++ + P +HTYN+++ + +M +W + D +SY + I GL
Sbjct: 538 MIQNGI-QPTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHG 596
Query: 240 KWKEACQYFVEMIEKGL-LPQ 259
+ +EAC+Y EMIEKG+ PQ
Sbjct: 597 RSEEACRYLEEMIEKGMKAPQ 617
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 10/180 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YT LI G+ ++D L EM E+G + TYN L+ + R
Sbjct: 475 PDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNR--------- 525
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A +++ +M GI+P + ++++++ Y ++ M KG CP +
Sbjct: 526 -QMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKGCCPDDNS 584
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + L GR E+A L EM+ G+ YN F ++ + +L R+MK
Sbjct: 585 YIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELARKMK 644
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 95/243 (39%), Gaps = 8/243 (3%)
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---KPQLSLDKLNFMKEKGICPTVATY 122
+ A VF+ M+ + V + + +L RA + Q +KL E P + TY
Sbjct: 320 KKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKL----EDRFTPNLRTY 375
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++ C + +A EM+ G P ++ + K + A+KL+ MK
Sbjct: 376 TVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKA 435
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
PN+ TY ILI +M E ++ + S D YT LI G ++K
Sbjct: 436 KGPS-PNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMD 494
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
+ EM EKG T+ L + + M R+ KK+ + I N
Sbjct: 495 KVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMM 554
Query: 303 KPY 305
K Y
Sbjct: 555 KSY 557
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 146/286 (51%), Gaps = 12/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K Y+ L+ GW K + A EM++ G P++VTY+++++ +C+
Sbjct: 200 PDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGR------- 252
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + M +P +S+++H Y + + ++D M+ G+ VA
Sbjct: 253 ---VDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAV 309
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++ C R+++ +L EM GV+P++++ N + R + + A ++R+M
Sbjct: 310 FNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFRKMI 369
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +C P+ TY ++I MF M+ ++W +++ + + ++++LI+GLCE+
Sbjct: 370 K--VCEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEPNT 427
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
++AC EMIE G+ P TF L + L++ D + L +K++
Sbjct: 428 QKACVLLEEMIEMGIRPSGATFGRLRQLLLKEDREDVLKFLNEKMN 473
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 131/306 (42%), Gaps = 46/306 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
M NV+ + ++ + + ++D A M + + PN+V +N LL+ +C+
Sbjct: 130 MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCK--------- 180
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K +R A+++F+ MR R PD ++SI+L + + + + M + G P +
Sbjct: 181 -SKNVRKAQEIFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIV 238
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+ +V LC GR+++A ++ M + P+ Y+ Y A+ + +M
Sbjct: 239 TYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEM 298
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG------------------ 222
+ + ++ +N LIG F NRM V + +K +
Sbjct: 299 ERSGM-KADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGE 357
Query: 223 ----------------LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D D+YTM+I CEK++ + A + + M +KG+ P TF L
Sbjct: 358 KDEAFDVFRKMIKVCEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVL 417
Query: 267 YRGLIQ 272
GL +
Sbjct: 418 INGLCE 423
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 105/217 (48%), Gaps = 2/217 (0%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
+V +F IV+ Y+RA K ++ N M++ + P + + ++ LC + A+E+
Sbjct: 132 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIF 191
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
M R+ +P ++TY+ + + + A +++R+M D +P+I TY+I++ +
Sbjct: 192 ENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMV-DAGSLPDIVTYSIMVDILCK 249
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
R+D I + S Y++L+H + + +EA F+EM G+
Sbjct: 250 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAV 309
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
F +L +++ ++ R+ K++ + +T S+ N
Sbjct: 310 FNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCN 346
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 153/293 (52%), Gaps = 20/293 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YTSL+ CKI + A R EM+E GVE NVVTY L++G+C ER
Sbjct: 270 VPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDA------ER 323
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ AEK+F +M G+ P++ S++ ++H + +A +L+ LN +K +GI P +
Sbjct: 324 ----MKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLL 379
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y + + LC +IE A+ ++ EM NG+ + Y Y + + L +M
Sbjct: 380 LYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEM 439
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK--GSELGLDLDS--YTMLIHGLC 236
+E D V + T+ +LI L + +V + ++ ++ GL ++ YT +I GLC
Sbjct: 440 QELDHEV-TVVTFCVLID---GLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLC 495
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG-LIQSDMLRTWRRLKKKLDE 288
++ + K A F +M ++GL+P + + +L G L Q +ML L+ K+ E
Sbjct: 496 KENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEAL-ALRDKMAE 547
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 126/273 (46%), Gaps = 11/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y S+I G+ K+ R+D F EM EP+V+TYN L+N C+ L
Sbjct: 165 IPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLE 224
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F + EM+ G++P+V S+S ++ + + Q ++ M+ G P
Sbjct: 225 F----------YREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEF 274
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS+V C G + DA L EM+ GV + TY + A KL+ +M
Sbjct: 275 TYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKM 334
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +PN+ +YN LI F+ MD E+ N +KG + DL Y I GLC +K
Sbjct: 335 VTAGV-IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEK 393
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ A EM E G+ + + TL +S
Sbjct: 394 IEAAKVVMNEMQENGIKANTLIYTTLMDAYFKS 426
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 131/272 (48%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + L++ + K+ + D +RF +MI G +P V TYN++++ + +
Sbjct: 96 PKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWK---------- 145
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A +F+EM+ RG+ PD +++ ++ Y + + ++ MK P V T
Sbjct: 146 EGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVIT 205
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C C G++ E EM ++G+ P+ +Y+ + A+K Y M+
Sbjct: 206 YNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMR 265
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
VPN TY L+ + + + N + + ++ +YT LI GLC+ ++
Sbjct: 266 RVGH-VPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERM 324
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
KEA + F +M+ G++P ++ L G +++
Sbjct: 325 KEAEKLFGKMVTAGVIPNLASYNALIHGFVKA 356
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 16/264 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y +LI+G+ K +D A L E+ RG++P+++ Y + G+C
Sbjct: 340 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCG--------- 390
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK I A+ V +EM+ GI+ + ++ ++ Y ++ P L L M+E TV
Sbjct: 391 LEK-IEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVV 449
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+ ++ LC + A + G M + G+ P+A Y A L+ Q
Sbjct: 450 TFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQ 509
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLCE 237
M ++ L VP+ Y L M L + +M+ + K +E+G+ LD +YT L+ G +
Sbjct: 510 MAQEGL-VPDRTAYTSL--MDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQ 566
Query: 238 KQKWKEACQYFVEMIEKGLLPQKV 261
+ ++A + EMI + +LP +V
Sbjct: 567 CNQLQKARSFLEEMIGEEILPDEV 590
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 9/172 (5%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN----CFFKEYR 165
MK + P + ++ G+ + + +M+ G P+ TYN C +KE
Sbjct: 89 MKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKE-- 146
Query: 166 GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL 225
D A L+ +MK L +P+ TYN +I + + R+D + +K D+
Sbjct: 147 --GDIEAARGLFEEMKFRGL-IPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDV 203
Query: 226 DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+Y LI+ C+ K + +++ EM + GL P V++ TL + DM++
Sbjct: 204 ITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQ 255
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 140/263 (53%), Gaps = 12/263 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ YT+L+ WC + A R +M+E+G++P+VV +N +++G+ R +R
Sbjct: 339 PDLRSYTALMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLR------GQRR 392
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + K+F+ M+ +G P+V ++++++ + + K +++ M+ G P VAT
Sbjct: 393 PEAV----KMFELMKAKGPPPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVAT 448
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + R++ +L EM + G P TYN K R + A+++Y++M
Sbjct: 449 YTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKMI 508
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L P IHTYN+++ F+ M +W + + D++SYT+ I+G +
Sbjct: 509 TKGL-EPTIHTYNMMMKSYFLGGRNYAMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGR 567
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
EAC++ EMI+KG+ ++ +
Sbjct: 568 PAEACKFLEEMIQKGMKAPQIDY 590
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V YT L+ G+ R+D L EM ++G P+ TYN L+ + R
Sbjct: 444 PEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRTYNALIKLLTNR--------- 494
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP-QLSLDKLNFMKEKGICPTVA 120
+A +++ +M +G+EP + ++++++ Y + + M KGICP V
Sbjct: 495 -NMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGRNYAMGCAVWEEMHRKGICPDVN 553
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR--GRKD 169
+YT + GR +A + L EM++ G+ YN F ++ G+ D
Sbjct: 554 SYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKFAADFSKAGKPD 604
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 4/223 (1%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
I+NA VF+ MRV G + V SF+ +L ++ + + + M+++ P + +YT+
Sbjct: 288 IKNAVGVFEMMRVHGFDDGVESFNCLLVALAQEGLGKEAARVFDRMRDQ-YTPDLRSYTA 346
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMKED 183
++ C+ + +A + +M+ G+ P +N RG++ A+K++ MK
Sbjct: 347 LMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPE-AVKMFELMKAK 405
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
PN+ TY +LI ++DM + ++ + ++ +YT L+ G ++
Sbjct: 406 GP-PPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDR 464
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EM +KG P T+ L + L +M R+ KK+
Sbjct: 465 VTAMLEEMAQKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKM 507
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 137/293 (46%), Gaps = 26/293 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PN YTSLI G C+ + +D+A M++ G +PN VTY+ L+NG+C L
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294
Query: 58 -NERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E +K I A ++ +M+ RG P++ +F+ ++ SR
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K ++++ + M G+ PT TY +++ LC GR E A + M+ +G PS +T
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN K + D AM ++ +M + PN+ TYN LI + ++ + +
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAG-SSPNVITYNTLIYGYCKQGNLNNAMRLLEIM 473
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
KG+ L D +YT LI G K + A F M+E G+ P VT+ + G
Sbjct: 474 KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 26/297 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC---------- 50
+PN++ +T+LI G + + ++A +M+ G+ P VTYN L+N +C
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFT 398
Query: 51 ------RRASLHPNERFEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
SL + + + I+ A +FD+M G P+V +++ +++ Y
Sbjct: 399 IFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC 458
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ ++ L MK G+ P TYT ++ G++E A L M+ +G+SP+
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHV 518
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY Y + A+ L+ +M E +P+ TYN++I F N +
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVESG-NLPSSQTYNVMISGFSKTNSISEAENFCGK 577
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ L ++ +YT I GLC + A + F EM ++ P T+ +L GL Q
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 143/299 (47%), Gaps = 16/299 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+T+L+ K + +D+A +M+ G+ P+++T+N ++N +C++ ++
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGR----------VQ 219
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A+ + + P+ +++ ++ + R H L+ + M + G P TY++++
Sbjct: 220 EAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLI 279
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LCS GR+E+A ++L EMV+ G+ P+ TY ++ A++L +MK+ C
Sbjct: 280 NGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRG-C 338
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VPNI T+ LI + ++ +++ + L +Y LI+ LC + +++ A
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFT 398
Query: 247 YFVEMIEKGLLPQKVTFETLYR-----GLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
F M+ G LP T+ + + G IQ M+ + LK IT+ + Y
Sbjct: 399 IFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 122/281 (43%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + ++I CK R+ A+ + + PN TY L+ G CR +L
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL---- 255
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +FD M G +P+ ++S +++ + + ++D L M +KGI PTV T
Sbjct: 256 ------AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYT 309
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT + LC G +A ELLG+M + G P+ +T+ A+ LY +M
Sbjct: 310 YTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKML 369
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D L VP TYN LI R + I+ + +Y +I C
Sbjct: 370 ADGL-VPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++A F +M++ G P +T+ TL G + L RL
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRL 469
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 17/302 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT++I G+ + ++D A +M+E G P+ TYNV+++G + S
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS------- 567
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I AE +M +G+ P+V +++ + R + L+ + M+++ P + T
Sbjct: 568 ---ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624
Query: 122 YTSVVKCLCSCGRIEDAE--ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y+S++ LC GR EDAE LL + G P+ +TY K G A +L
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684
Query: 180 MKEDDLCVPNIHTYN-ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M++ L P+ Y +LIG L +++ I+ + L L Y LI LC++
Sbjct: 685 MQKKGL-QPSEEIYRALLIGECKNL-KVESALNIFYSMDTLGFQLHLSDYKALICALCKE 742
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
+EA F M+EK +V + L GL++ +L ++ + T FQ
Sbjct: 743 NFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTL--NFQ 800
Query: 299 NY 300
Y
Sbjct: 801 TY 802
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
SF+ +L + L+ D M GI P++ T+ +++ LC GR+++A+ ++ +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
R P+A TY + + + A ++ +M +D C PN TY+ LI + R
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG-CDPNSVTYSTLINGLCSEGR 287
Query: 206 ----MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
MDM+ E+ KG E + +YT+ + LC+ EA + +M ++G +P
Sbjct: 288 LEEAMDMLEEMVQ--KGIE--PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQ 343
Query: 262 TFETLYRGL 270
TF L GL
Sbjct: 344 TFTALISGL 352
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 139/310 (44%), Gaps = 35/310 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +I G+C R AE+ L EM+ER + P+VVT++ L+N + E
Sbjct: 286 PDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEEL 345
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ + AE +F +G PD+ +F+ ++ Y R
Sbjct: 346 YDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCR 405
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + L+ M E G+ TYT+++ C G + A++LL EM+ +GV P+ T
Sbjct: 406 AKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVT 465
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCV----------PNIHTYNILIGMFMALNRM 206
N A+++++ M++ + + P++ TYNILI + +
Sbjct: 466 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKF 525
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
E++ + + D +Y+ +I GLC++ + EA Q F M K P VTF TL
Sbjct: 526 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTL 585
Query: 267 YRGLIQSDML 276
G ++ M+
Sbjct: 586 ITGYCKAGMV 595
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 134/285 (47%), Gaps = 22/285 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+S+I G+CK NR+D AE +G P+++T+N L+ G CR
Sbjct: 355 IPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCR--------- 405
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K + + K+ EM G+ + +++ ++H + + + D L M G+CP V
Sbjct: 406 -AKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVV 464
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVR-----------NGVSPSAETYNCFFKEYRGRKD 169
T +++ LC G+++DA E+ M + NGV P +TYN
Sbjct: 465 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGK 524
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A +LY +M + VP+ TY+ +I +R+D ++++ + D+ ++
Sbjct: 525 FLEAEELYEEMPHRGI-VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFN 583
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
LI G C+ + + F EM ++G++ +T+ TL G + D
Sbjct: 584 TLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVD 628
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 151/322 (46%), Gaps = 36/322 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------- 54
PNV +T+L+ G C+ R+ A L M+E G++PN +TY +++G+C+
Sbjct: 180 PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNL 239
Query: 55 ---------LHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ PN TI +A +F EM+ + I PD+ +++ +++ +
Sbjct: 240 LRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFC 299
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + L M E+ I P V T+++++ G+ +AEEL EM+ + PS
Sbjct: 300 ISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTV 359
Query: 156 TYNCFFKEY--RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
TY+ + + R DA M K C P+I T+N LI + R+D ++
Sbjct: 360 TYSSMIDGFCKQNRLDAAEHMFYLTPTKG---CSPDIITFNTLIAGYCRAKRVDDGIKLL 416
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + + L + +YT LIHG C+ A EMI G+ P VT TL GL +
Sbjct: 417 HEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDN 476
Query: 274 ----DMLRTWRRLKK-KLDEES 290
D L ++ ++K K+D ++
Sbjct: 477 GKLKDALEMFKAMQKSKMDIDA 498
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 130/283 (45%), Gaps = 22/283 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV +Y ++I G K R A EM E+ + P++VTYN ++NG C
Sbjct: 250 IPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRW----- 304
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+AE++ EM R I PDV +FS +++ + + K + + + M + I P+
Sbjct: 305 -----SDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTV 359
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+S++ C R++ AE + G SP T+N Y K + +KL +M
Sbjct: 360 TYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 419
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E L V N TY LI F + ++ +++ + S + ++ + L+ GLC+ K
Sbjct: 420 TEAGL-VANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGK 478
Query: 241 WKEACQYFVEMIEK-----------GLLPQKVTFETLYRGLIQ 272
K+A + F M + G+ P T+ L GLI
Sbjct: 479 LKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLIN 521
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 136/311 (43%), Gaps = 31/311 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
P V + +L++G C +RI A +M +PNVVT+ L+NG+CR
Sbjct: 149 PTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVAL 204
Query: 54 -------SLHPNERFEKTIRNAE-KVFDEM----------RVRGIEPDVTSFSIVLHVYS 95
L PN+ TI + K+ D + V I P+V ++ ++
Sbjct: 205 LDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLW 264
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + + M+EK I P + TY ++ C GR DAE+LL EM+ ++P
Sbjct: 265 KDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVV 324
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
T++ + A +LY +M + +P+ TY+ +I F NR+D ++
Sbjct: 325 TFSALINAFVKEGKFFEAEELYDEMLPRSI-IPSTVTYSSMIDGFCKQNRLDAAEHMFYL 383
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
D+ ++ LI G C ++ + + EM E GL+ +T+ TL G Q
Sbjct: 384 TPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 443
Query: 276 LRTWRRLKKKL 286
L + L +++
Sbjct: 444 LNAAQDLLQEM 454
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 36/236 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+ N YT+LI+G+C++ ++ A+ L EMI GV PNVVT N LL+G+C L
Sbjct: 425 VANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALE 484
Query: 56 ---------------HPNERFEKTIRN----------------AEKVFDEMRVRGIEPDV 84
P E ++ AE++++EM RGI PD
Sbjct: 485 MFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 544
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++S ++ + + + + M K P V T+ +++ C G ++D EL E
Sbjct: 545 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCE 604
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
M + G+ A TY +R + +GA+ ++++M + I N+L G++
Sbjct: 605 MGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLW 660
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 142/307 (46%), Gaps = 22/307 (7%)
Query: 1 MP-NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE 59
MP N +T L+ +C +++ A G++ + G P VVT+N LL+G+C
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLC--------- 162
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
E I A +F +M +P+V +F+ +++ R + ++ L+ M E G+ P
Sbjct: 163 -VEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQ 217
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVR-NGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
TY ++V +C G A LL +M + + P+ YN + A L+
Sbjct: 218 ITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFI 277
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M+E ++ P+I TYN +I F R ++ + ++ D+ +++ LI+ ++
Sbjct: 278 EMQEKEI-FPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKE 336
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITF 293
K+ EA + + EM+ + ++P VT+ ++ G + + L + K + ITF
Sbjct: 337 GKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITF 396
Query: 294 GSEFQNY 300
+ Y
Sbjct: 397 NTLIAGY 403
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 123/285 (43%), Gaps = 29/285 (10%)
Query: 13 GWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA------SLH--------PN 58
G+ +I +D A G M+ P+V+ + L+ V R SLH P
Sbjct: 55 GFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPC 114
Query: 59 ERFEKTIRN-----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL 107
+ TI A F ++ G P V +F+ +LH + +LD
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174
Query: 108 NFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR 167
+ M + P V T+T+++ LC GR+ +A LL M+ +G+ P+ TY
Sbjct: 175 HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230
Query: 168 KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS 227
D A+ L R+M+E +PN+ YN +I R ++ ++ E+ D+ +
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
Y +I+G C +W +A Q EM+E+ + P VTF L ++
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVK 335
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+S+I G CK +R+D A + M + P+VVT+N L+ G C+
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAG------- 593
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + ++F EM RGI D ++ +++ + + +LD M G+ P
Sbjct: 594 ---MVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTI 650
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEM 145
T +++ L S +E A +L ++
Sbjct: 651 TIRNMLTGLWSKEELERAVAMLEDL 675
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 10/145 (6%)
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
GE G + F E +G DA + L+ M +P++ + L+G+ +
Sbjct: 38 GESDEAGFGGESLKLQSGFHEIKGLDDA---IDLFGYMVRSRP-LPSVIDFCKLMGVVVR 93
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
+ R D+V + ++ + + S+T+L+ C K A F ++ + G P VT
Sbjct: 94 MGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVT 153
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLD 287
F TL GL D R+ + LD
Sbjct: 154 FNTLLHGLCVED------RISEALD 172
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 153/297 (51%), Gaps = 18/297 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +++LI G CK + D E +MI G PNVVTYN L+NG+C+ ++
Sbjct: 223 PDTVTFSTLIDGLCKCGQTD--EACNDDMIAGGYVPNVVTYNALVNGLCKA------DKM 274
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A + + M +G+ PDV ++S+++ + +A + +L+ L+ M +G P V T
Sbjct: 275 ER----AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 330
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++ LC R +A ++ ++ + P T+N + A L+ +M
Sbjct: 331 FNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMV 390
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ P++ T+ LI +++ R+I + + + ++ +Y +L+HGLC+ +
Sbjct: 391 AKNM-QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRI 449
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKK-KLDEESITF 293
+E C++ EM+ G +P+ +T+ +L L ++ D L+ +LK D +++T+
Sbjct: 450 EEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTY 506
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 135/309 (43%), Gaps = 47/309 (15%)
Query: 3 NVKMYTSLIYGWCKINRIDMA-ERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V Y ++ C+ A E F GEM GV P +VTYN ++NG+C+ L
Sbjct: 44 SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGA---- 99
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++F+E+ RG PDV +++ ++ +A + + M +G P V T
Sbjct: 100 ------GMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVT 153
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNG--VSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y+ ++ LC GRI++A EL+ EM R V P+ TYN F + A +L R
Sbjct: 154 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRS 213
Query: 180 MKE----------------DDLC------------------VPNIHTYNILIGMFMALNR 205
+++ D LC VPN+ TYN L+ ++
Sbjct: 214 LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADK 273
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
M+ + + + D+ +Y++L+ C+ + EA + M +G P VTF +
Sbjct: 274 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNS 333
Query: 266 LYRGLIQSD 274
+ GL +SD
Sbjct: 334 IIDGLCKSD 342
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 128/302 (42%), Gaps = 65/302 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+ L+ +CK +R+D A L M RG PNVVT+N +++G+C+ S E F
Sbjct: 291 PDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK--SDRSGEAF 348
Query: 62 EKTIR---------------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
+ ++ A +F+EM + ++PDV +F ++
Sbjct: 349 QIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGL 408
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+A + + + D L+ M G+ P V TY +V LC GRIE+ E L EMV +G
Sbjct: 409 CKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSG----- 463
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
CVP TY L+ +R D ++ +
Sbjct: 464 -------------------------------CVPESMTYGSLVYALCRASRTDDALQLVS 492
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+K D +Y +L+ GL + K ++A EM+ KG P TF + GL +S
Sbjct: 493 KLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSG 552
Query: 275 ML 276
L
Sbjct: 553 NL 554
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 132/310 (42%), Gaps = 32/310 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-HPNER 60
P+V Y +LI CK ++ A R G M RG PNVVTY+VL+NG+C+ + E
Sbjct: 114 PDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEAREL 173
Query: 61 FEKTIRNAEKVF---------------DEMRVRGIE-------------PDVTSFSIVLH 92
++ R + V M E PD +FS ++
Sbjct: 174 IQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLID 233
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+ + + + + M G P V TY ++V LC ++E A ++ MV GV+P
Sbjct: 234 GLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTP 291
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
TY+ + + A++L M C PN+ T+N +I +R +I
Sbjct: 292 DVITYSVLVDAFCKASRVDEALELLHGMASRG-CTPNVVTFNSIIDGLCKSDRSGEAFQI 350
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
V L D ++ +LI G C+ +++A F EM+ K + P +TF L GL +
Sbjct: 351 ALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCK 410
Query: 273 SDMLRTWRRL 282
+ + R +
Sbjct: 411 AGQVEAARDI 420
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 142/338 (42%), Gaps = 57/338 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y ++I G CK N + E+++RG P+VVTYN L++ +C+ L
Sbjct: 79 PTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLE----- 133
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-------- 113
A ++ M RG P+V ++S++++ + + + + + M K
Sbjct: 134 -----EARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNI 188
Query: 114 --------GIC-----------------------PTVATYTSVVKCLCSCGRIEDAEELL 142
G+C P T+++++ LC CG+ ++A
Sbjct: 189 ITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN-- 246
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
+M+ G P+ TYN A + M + + P++ TY++L+ F
Sbjct: 247 DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGV-TPDVITYSVLVDAFCK 305
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
+R+D E+ + + ++ ++ +I GLC+ + EA Q +++ + L+P KVT
Sbjct: 306 ASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVT 365
Query: 263 FETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
F L G ++ L K + + +TFG+
Sbjct: 366 FNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGA 403
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 16/264 (6%)
Query: 33 RGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
R +V YN++L +CR +T R E EM G+ P + +++ +++
Sbjct: 39 RSSSRSVADYNIVLQSLCRAG---------ETARALEIFRGEMARDGVAPTIVTYNTIIN 89
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
++++ ++ + ++G P V TY +++ LC G +E+A L G M G P
Sbjct: 90 GLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVP 149
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQM--KEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
+ TY+ + A +L ++M K D+ +PNI TYN + +
Sbjct: 150 NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDV-LPNIITYNSFLDGLCKQSMTAEAC 208
Query: 211 EIWNHVKGSELGLDLD--SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
E+ ++ L + D +++ LI GLC+ + EAC +MI G +P VT+ L
Sbjct: 209 ELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACND--DMIAGGYVPNVVTYNALVN 266
Query: 269 GLIQSDMLRTWRRLKKKLDEESIT 292
GL ++D + + + + ++ +T
Sbjct: 267 GLCKADKMERAHAMIESMVDKGVT 290
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P Y SL+Y C+ +R D A + + ++ G +P+ VTYN+L++G L + +
Sbjct: 465 VPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDG------LWKSGK 518
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ I V +EM +G +PD +F+ R+ +++ L + KG+ P
Sbjct: 519 TEQAI----TVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDAT 574
Query: 121 TYTSVV 126
T +S++
Sbjct: 575 TCSSIL 580
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 151/304 (49%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ + LI G+C++ ++ A +F EM +RGV P+VV+++ L+ R +
Sbjct: 260 PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMD----- 314
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A EM+ G+ PD +++V+ + RA +L + M G P V T
Sbjct: 315 -----HAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVT 369
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC R+ DAEELL EM GV+P T+ Y + A++L+ +
Sbjct: 370 YNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLL 429
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P++ YN LI + E+W+ + E+ + +Y++LI CEK +
Sbjct: 430 HQRL-RPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQV 488
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES-----ITFGSE 296
+EA + EM+ KG LP +T+ ++ +G +S ++ ++ +K+ +++ ITF +
Sbjct: 489 EEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTL 548
Query: 297 FQNY 300
Y
Sbjct: 549 IHGY 552
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 141/273 (51%), Gaps = 11/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +L+ G CK +R+ AE L EM ERGV P++ T+ L++G CR +
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGN------ 417
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
FEK + ++FD + + + PDV +++ ++ R + + + M + I P
Sbjct: 418 FEKAL----QLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHV 473
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+ ++ C G++E+A L EMV G P+ TYN K Y + + ++M
Sbjct: 474 TYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKM 533
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+D++ +P++ T+N LI ++ M ++N ++ + D +Y M+I+G E+
Sbjct: 534 MQDNI-LPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGN 592
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+EA + F +M G+ P + T+ +L G + +
Sbjct: 593 MEEAGRVFKKMGASGIEPDRYTYMSLINGHVTA 625
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 11/271 (4%)
Query: 22 MAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE 81
+AE ++ E N T N++++ C+ + F+K A+ V EM R +
Sbjct: 140 LAEEAYRLVLSSDSEVNAYTLNIMVHSYCK------SLEFDK----ADTVISEMEKRCVF 189
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
PDV + ++++ RA ++ ++ M KG+ P + T+ SV+K LC R + A+E+
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV 249
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
M + V+P ++N + + AMK Y++M++ + P++ +++ LIG+F
Sbjct: 250 FRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGV-TPDVVSFSCLIGLFS 308
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
+MD +KG L D YTM+I G C EA + EM+ G LP V
Sbjct: 309 TRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVV 368
Query: 262 TFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
T+ TL GL + L L ++ E +T
Sbjct: 369 TYNTLLNGLCKQHRLLDAEELLNEMKERGVT 399
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 125/260 (48%), Gaps = 11/260 (4%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
+++ +CK D A+ + EM +R V P+VVT+NVL++ R + A
Sbjct: 163 MVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGD----------VDAAI 212
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+ D M +G++P + +F+ VL + + + + M + + P V ++ ++
Sbjct: 213 ALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGF 272
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C G +E+A + EM + GV+P +++C + R + A R+MK L VP+
Sbjct: 273 CRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGL-VPD 331
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
Y ++IG F M + + + G D+ +Y L++GLC++ + +A +
Sbjct: 332 GVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLN 391
Query: 250 EMIEKGLLPQKVTFETLYRG 269
EM E+G+ P TF TL G
Sbjct: 392 EMKERGVTPDLCTFTTLIHG 411
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 1/171 (0%)
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
RA P L+ + + T +V C + A+ ++ EM + V P
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
T+N D + A+ L M L P I T+N ++ R D +E++
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGL-KPGIVTFNSVLKGLCKHRRFDKAKEVFRA 252
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + D+ S+ +LI G C + +EA +++ EM ++G+ P V+F L
Sbjct: 253 MDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCL 303
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 146/320 (45%), Gaps = 35/320 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN Y LI G+CK + I+ A +M + GV PNVVT N L++G+C+ ++
Sbjct: 413 MPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVE 472
Query: 61 F-------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
F I A ++FDEM G PD + ++ S
Sbjct: 473 FFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLS 532
Query: 96 RAHKPQLSLDKLNF----MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+A K LD+ +F MKE G P + ++ ++ C ++++A E+L EM G+
Sbjct: 533 QAGK----LDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIK 588
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P TYN + D + A +L ++M ++ L VP + TY LI + +D +
Sbjct: 589 PDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGL-VPTVVTYGALIHAYCLNGNLDEAMK 647
Query: 212 IWNHVKG-SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
I+ + S++ + Y +LI+ LC K + A +M KG+ P TF +++GL
Sbjct: 648 IFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGL 707
Query: 271 IQSDMLRTWRRLKKKLDEES 290
+ + L L ++ E +
Sbjct: 708 QEKNWLSKAFELMDRMTEHA 727
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 144/309 (46%), Gaps = 20/309 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFL-----GEMIERGVEPNVVTYNVLLNGVCRRASLH 56
PNV + LI CK R+D A GE VEP+V+TYN L++G+C+
Sbjct: 338 PNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVG--- 394
Query: 57 PNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
R E+ + E++ + R P+ +++ ++ Y +A + + + + M + G+
Sbjct: 395 ---RQEEGLGLVERMRSQPRCM---PNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVP 448
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P V T ++V +C GRI A E EM G+ +A TY + + + AM+L
Sbjct: 449 PNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMEL 508
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+ +M E C P+ Y LI ++D + + +K + D+ S+ +LI+G C
Sbjct: 509 FDEMLEAG-CSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFC 567
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES-----I 291
K K EA + EM G+ P VT+ TL ++ T RL KK+ +E +
Sbjct: 568 RKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVV 627
Query: 292 TFGSEFQNY 300
T+G+ Y
Sbjct: 628 TYGALIHAY 636
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 10/264 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N YT+LI +C +N I+ A EM+E G P+ + Y L++G+ + L
Sbjct: 485 NAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLD------ 538
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A V +M+ G PD+ SF+++++ + R +K + + L M+ GI P TY
Sbjct: 539 ----RASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTY 594
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ G A L+ +MV+ G+ P+ TY Y + + AMK++R M
Sbjct: 595 NTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSS 654
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
PN YNILI N++D+ + + +K + + +++ + GL EK
Sbjct: 655 TSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLS 714
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
+A + M E P +T E L
Sbjct: 715 KAFELMDRMTEHACNPDYITMEIL 738
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 16 KINRIDMAERFLG---EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
K+ R E +G + E V PN + L++ +CR +T R + +
Sbjct: 244 KVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSG---------RTDRAWDVLH 294
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
M++ G+ + S + +L RA + + L MKE I P V T+ ++ LC
Sbjct: 295 GLMKLGGVM-EAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKF 353
Query: 133 GRIEDAEELLGEM---VRNG--VSPSAETYNCFFKEY--RGRKDANGAMKLYRQMKEDDL 185
R+++A E+ +M NG V P TYN GR++ + L +M+
Sbjct: 354 RRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEE--GLGLVERMRSQPR 411
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
C+PN TYN LI + + ++ RE+++ + + ++ + L+ G+C+ + A
Sbjct: 412 CMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAV 471
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGL 270
++F EM KGL VT+ L R
Sbjct: 472 EFFNEMQGKGLKGNAVTYTALIRAF 496
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNE 59
+P V Y +LI+ +C +D A + +M V PN V YN+L+N +CR+
Sbjct: 623 VPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRK------- 675
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ A + D+M+V+G++P+ +F+ + + + + ++ M E P
Sbjct: 676 ---NQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDY 732
Query: 120 ATYTSVVKCLCSCG 133
T + + L + G
Sbjct: 733 ITMEILTEWLSAVG 746
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 142/293 (48%), Gaps = 13/293 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +Y L+ K R+D +M+ GV P T+NVL+ +C L
Sbjct: 19 PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLD----- 73
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++FD+M +G EP+ SF I++ Y RA L+ L M+ G P
Sbjct: 74 -----DARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVV 128
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C G+ +DAE+L+ EM ++G+SP T+N A +++R M+
Sbjct: 129 YNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQ 188
Query: 182 EDD---LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
D+ L PNI TYN+++G F ++ R ++ +K SE ++ +SY + + GL
Sbjct: 189 IDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRI 248
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K EA EM++ G+ P ++ + GL ++ +L R L + + +
Sbjct: 249 GKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGV 301
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 151/376 (40%), Gaps = 88/376 (23%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGV-------------------------- 35
PN +Y +LI +CK + D AE+ + EM + G+
Sbjct: 124 PNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRI 183
Query: 36 -------------EPNVVTYNVLLNGVCRRASLH-PNERFEK------------------ 63
+PN++TYN++L G C+ L FEK
Sbjct: 184 FRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLL 243
Query: 64 ------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
+ A+ V EM G+EP+V S++IV+ + + + M G+ P
Sbjct: 244 GLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLP 303
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
TYT+++ C G++ +A +L EM+R+G SP+ T N + A +L
Sbjct: 304 DTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELL 363
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI----WNH-------VKGSELGL--- 223
++M E + + T NI+I ++D EI W H + S +GL
Sbjct: 364 QKMNEKGYVIDTV-TCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDD 422
Query: 224 ---------DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
DL SY+ +I GLC+ + EA + F+EM+ K L P ++ +
Sbjct: 423 SDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEG 482
Query: 275 MLRTWRRLKKKLDEES 290
+ + R+ K ++++
Sbjct: 483 KISSAFRVLKDMEKKG 498
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 40/299 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YT+L++G+C ++ A L EM+ G PN T N+LL + +
Sbjct: 302 LPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWK--------- 352
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC---- 116
E I AE++ +M +G D + +IV+ K +++ +N M G
Sbjct: 353 -EGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGN 411
Query: 117 -------------------PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
P + +Y++++ LC GR+ +A++ EM+ + P + Y
Sbjct: 412 LGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIY 471
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW---N 214
+ F + + A ++ + M E C + TYN LI M L + + EI+ +
Sbjct: 472 DVFIHSFCKEGKISSAFRVLKDM-EKKGCNKTLQTYNSLI---MGLGSKNQIFEIYGLID 527
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ + D+ Y ++ LCE + K+A EM++KG+ P +F L + ++
Sbjct: 528 EMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKA 586
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 132/271 (48%), Gaps = 14/271 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP++ Y+++I G CK R+ A++ EM+ + ++P+ Y+V ++ C+
Sbjct: 430 MPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCK--------- 480
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSF-SIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
E I +A +V +M +G + ++ S+++ + S+ ++ ++ M+E+G+ P V
Sbjct: 481 -EGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEI-YGLIDEMRERGVSPDV 538
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+ Y +V+ LC GR++DA +L EM++ G+SP+ +++ K + D + +++
Sbjct: 539 SIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEI 598
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
++C Y++ + + +E++ + Y LI LC+ +
Sbjct: 599 AL--NVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDE 656
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
K +A ++I+KG +F + GL
Sbjct: 657 KLDDASGILHKLIDKGYWFDPASFMPVIDGL 687
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 155/317 (48%), Gaps = 27/317 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRR-----ASL 55
PN Y ++I GWCK+ R+D A + EM+ +G V+P V YN L+ G C + A L
Sbjct: 548 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 607
Query: 56 HPNERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ + E+ + A ++ +EM +G+ PDV +++I+++ +
Sbjct: 608 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 667
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + +L+ M +G+ TV TYT+++ L G++++ ++L E VR G+ P
Sbjct: 668 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 727
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
YN + + + A ++ +M++ + P+ TYN L+ L R+D R++ +
Sbjct: 728 LYNALINSHSTSGNIDRAFEIMGEMEKKRI-APDDVTYNTLMRGLCLLGRVDEARKLIDE 786
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ + DL +Y LI G K K+A + EM+ KG P +T+ L +GL ++
Sbjct: 787 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 846
Query: 276 LRTWRRLKKKLDEESIT 292
+ K++ E IT
Sbjct: 847 GDDAENMVKEMVENGIT 863
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 46/273 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI G CK + A M RGV VVTY L+ + ++
Sbjct: 654 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ------- 706
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ +K+FDE RGI PD+ ++ +++ +S + + + + M++K I P T
Sbjct: 707 ---VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 763
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ LC GR+++A +L+ EM G+ P TYN Y + D A+++ +M
Sbjct: 764 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 823
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P + TYN LI GLC+ +
Sbjct: 824 NKGFN-PTLLTYN-----------------------------------ALIQGLCKNGQG 847
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+A EM+E G+ P T+ +L GL D
Sbjct: 848 DDAENMVKEMVENGITPDDSTYISLIEGLTTED 880
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 53 ASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
ASLHP + D R+R + T+F+I+L A KP +L+ L M
Sbjct: 453 ASLHPLLSALPSAPAFALFADMFRLR-LPLCTTTFNIMLRHLCSAGKPARALELLRQMPR 511
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEM-VRNGVSPSAETYNCFFKEYRGRKDAN 171
P TY +V+ CS GR++ A +++ EM R G++P+ TY + +
Sbjct: 512 ----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVD 567
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A+K++ +M P YN LIG + ++D + + + + + +Y +L
Sbjct: 568 EAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 627
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+H L + EA + EM KGL P T+ L G
Sbjct: 628 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILING 665
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 145/297 (48%), Gaps = 26/297 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----------- 51
+V YT+LIYG+C +++ A L EM+ + + PNV TYN+L++ +C+
Sbjct: 233 DVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVL 292
Query: 52 ----RASLHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+A + P+ T+ + A+ VF+ M + G+ PDV S++I+++ + +
Sbjct: 293 AVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKN 352
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+L+ M +K + P + TY+S++ LC GRI +L+ EM G+ + TY
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITY 412
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
N + A+ L+ +MK+ + P T+ IL+ R+ +E + +
Sbjct: 413 NSLIDGLCKNGHLDRAIALFNKMKDQGI-RPCSFTFTILLDGLCKGGRLKDAQEAFQDLL 471
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
LD+ Y ++I+G C++ +EA +M E G +P VTF+ + L + D
Sbjct: 472 TKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKD 528
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 148/315 (46%), Gaps = 26/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----RASLH- 56
P+ +T+LI G C +++ A F +++ +G++ + V+Y L+NGVC+ R ++
Sbjct: 127 PHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKL 186
Query: 57 ----------PNERFEKTIRNA----------EKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN TI +A +F EM +GI DV +++ +++ +
Sbjct: 187 VRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCI 246
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A K + ++ LN M K I P V TY +V LC G++++A+ +L M++ V P T
Sbjct: 247 ASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVIT 306
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ Y + A ++ M + P++H+Y ILI F +D ++ +
Sbjct: 307 YSTLMDGYFLVYELKKAQHVFNAMSLMGV-TPDVHSYTILINGFCKNKMVDEALNLFKEM 365
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + +Y+ LI GLC+ + EM ++G+ +T+ +L GL ++ L
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHL 425
Query: 277 RTWRRLKKKLDEESI 291
L K+ ++ I
Sbjct: 426 DRAIALFNKMKDQGI 440
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 133/276 (48%), Gaps = 11/276 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV+MY ++I CK + A EM +G+ +VVTY L+ G C + L
Sbjct: 197 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKL------ 250
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + +EM ++ I P+V +++I++ + K + + + L M + + P V T
Sbjct: 251 ----KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVIT 306
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ ++ A+ + M GV+P +Y + K + A+ L+++M
Sbjct: 307 YSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMH 366
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ VP I TY+ LI R+ V ++ + ++ + ++ +Y LI GLC+
Sbjct: 367 QKNM-VPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHL 425
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
A F +M ++G+ P TF L GL + L+
Sbjct: 426 DRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLK 461
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 135/298 (45%), Gaps = 28/298 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ LI +C + +I L ++++RG +P+ +T+ L+ G+C + ++ F
Sbjct: 92 PDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHF 151
Query: 62 EKTI-------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ R A K+ ++ R +P+V ++ ++ +
Sbjct: 152 HDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCK 211
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + M KGI V TYT+++ C ++++A LL EMV ++P+ T
Sbjct: 212 YQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYT 271
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNH 215
YN A + M + CV P++ TY+ L+ + + + + ++N
Sbjct: 272 YNILVDALCKEGKVKEAKNVLAVMLKA--CVKPDVITYSTLMDGYFLVYELKKAQHVFNA 329
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + D+ SYT+LI+G C+ + EA F EM +K ++P VT+ +L GL +S
Sbjct: 330 MSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + Y+SLI G CK RI + EM +RG+ NV+TYN L++G+C+ L
Sbjct: 371 VPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLD---- 426
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +F++M+ +GI P +F+I+L + + + + + + KG V
Sbjct: 427 ------RAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVY 480
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ C G +E+A +L +M NG P+A T++ + + + A KL RQM
Sbjct: 481 KYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 127/292 (43%), Gaps = 22/292 (7%)
Query: 17 INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR 76
I +D A M+ P ++ +N +L+ + K A + +
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKI----------KHYSTAVSLSHRLE 86
Query: 77 VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
++GI+PD+ + +I+++ + + L + ++G P T+T+++K LC G++
Sbjct: 87 LKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVN 146
Query: 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
A +++ G+ +Y D GA+KL R++ + L PN+ YN +
Sbjct: 147 KALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKI-DGRLTKPNVEMYNTI 205
Query: 197 IGMFMALNRMDMVRE---IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
I AL + +V E +++ + + D+ +YT LI+G C K KEA EM+
Sbjct: 206 ID---ALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVL 262
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGSEFQNY 300
K + P T+ L L + ++ + LK + + IT+ + Y
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGY 314
>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 145/294 (49%), Gaps = 24/294 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + Y +L+ G CKI A L +M++R + PNVV YN +L+G+C+R
Sbjct: 179 NARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRG--------- 229
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLH-VYSRAHKPQLSLDKLNFM-KEKGICPTVA 120
+ A + EM V +EP+V +++ ++ + + + N M EKGI P V
Sbjct: 230 -LVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQ 288
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T++ +V C G + AE ++G MVR GV P+ TYN Y R AM+++ M
Sbjct: 289 TFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLM 348
Query: 181 -KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+E + C+P++ T+N LI + + +D + + + G L D+ ++T LI G CE +
Sbjct: 349 VREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVK 408
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
K A + F M E G +P T + GL L+ W LD E++T
Sbjct: 409 KPLAARELFFTMKEHGQVPNLQTCAVVLDGL-----LKCW------LDSEAVTL 451
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 143/327 (43%), Gaps = 48/327 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y +++ G CK + A L EM VEPNVVTYN L+ G+C
Sbjct: 213 PNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFG------- 265
Query: 62 EKTIRNAEKVFDEMRV-RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
R +F+EM +GI PDV +FSI++ + + + + FM G+ P V
Sbjct: 266 --GWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVV 323
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVS--PSAETYNCFFKEYRGRKDANGAMKLYR 178
TY S++ C ++E+A + G MVR G PS T+N + K+ + AM L
Sbjct: 324 TYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLS 383
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK--------------------- 217
+M L P++ T+ LIG F + + RE++ +K
Sbjct: 384 EMVGKGL-DPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKC 442
Query: 218 --------------GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
S L LD+ Y +++ G+C+ K +A + ++ KGL T+
Sbjct: 443 WLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTY 502
Query: 264 ETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ +GL + +L L +K+ E
Sbjct: 503 NIMIKGLCREGLLDDAEELLRKMKENG 529
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 142/285 (49%), Gaps = 12/285 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V+ ++ L+ G+CK + AE +G M+ GVEPNVVTYN L+ G C R+ + R
Sbjct: 284 VPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMR 343
Query: 61 -FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
F +R E G P V + + ++H + + + ++ L+ M KG+ P V
Sbjct: 344 VFGLMVREGE---------GCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDV 394
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+TS++ C + A EL M +G P+ +T + A+ L+R
Sbjct: 395 FTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRA 454
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + L + +I YNI++ + +++ R++ + V L +D +Y ++I GLC +
Sbjct: 455 MMKSGLDL-DIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREG 513
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRLK 283
+A + +M E G P K ++ +GL++ D+ R+ + L+
Sbjct: 514 LLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQ 558
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 133/297 (44%), Gaps = 24/297 (8%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
C + + + LG M + G+EP +VT N ++NG+C E + +A + ++
Sbjct: 121 CHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLC----------IEGDVNHALWLVEK 170
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
M G + ++ +++ + +L+ L M ++ + P V Y +++ LC G
Sbjct: 171 MENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGL 230
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFK----EYRGRKDANGAMKLYRQMKEDDLCVPNI 190
+ +A LL EM V P+ TYNC + E+ G ++ G L+ +M + VP++
Sbjct: 231 VGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVG---LFNEMVAEKGIVPDV 287
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
T++IL+ F + + + + ++ +Y LI G C + + +EA + F
Sbjct: 288 QTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGL 347
Query: 251 MIE--KGLLPQKVTFETLYRGL-----IQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
M+ +G LP VT +L G + M + K LD + T+ S +
Sbjct: 348 MVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGF 404
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
DV + +I ++ K L L M + G+ PT+ T ++V LC G + A L+
Sbjct: 109 DVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLV 168
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
+M G +A TY D +GA++ ++M + +L PN+ YN ++
Sbjct: 169 EKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLG-PNVVVYNAILD---G 224
Query: 203 LNRMDMVREIWNHVKGSELGL-----DLDSYTMLIHGLC-EKQKWKEACQYFVEMI-EKG 255
L + +V E + E+G+ ++ +Y LI GLC E W+E F EM+ EKG
Sbjct: 225 LCKRGLVGEALGLLH--EMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKG 282
Query: 256 LLPQKVTFETLYRGLIQSDML 276
++P TF L G + +L
Sbjct: 283 IVPDVQTFSILVDGFCKEGLL 303
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 137/293 (46%), Gaps = 26/293 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PN YTSLI G C+ + +D+A M++ G +PN VTY+ L+NG+C L
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294
Query: 58 -NERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E +K I A ++ +M+ RG P++ +F+ ++ SR
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K ++++ + M G+ PT TY +++ LC GR E A + M+ +G PS +T
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN K + D AM ++ +M + PN+ TYN LI + ++ + +
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAG-SSPNVITYNTLIYGYCKQGNLNNAMRLLEIM 473
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
KG+ L D +YT LI G K + A F M+E G+ P VT+ + G
Sbjct: 474 KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 26/297 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC---------- 50
+PN++ +T+LI G + + ++A +M+ G+ P VTYN L+N +C
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFT 398
Query: 51 ------RRASLHPNERFEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
SL + + + I+ A +FD+M G P+V +++ +++ Y
Sbjct: 399 IFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC 458
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ ++ L MK G+ P TYT ++ G++E A L M+ +G+SP+
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHV 518
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY Y + A+ L+ +M E +P+ TYN++I F N +
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVESG-NLPSSQTYNVMISGFSKTNSISEAENFCGK 577
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ L ++ +YT I GLC + A + F EM ++ P T+ +L GL Q
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 143/299 (47%), Gaps = 16/299 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+T+L+ K + +D+A +M+ G+ P+++T+N ++N +C++ ++
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGR----------VQ 219
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A+ + + P+ +++ ++ + R H L+ + M + G P TY++++
Sbjct: 220 EAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLI 279
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LCS GR+E+A ++L EMV+ G+ P+ TY ++ A++L +MK+ C
Sbjct: 280 NGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRG-C 338
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VPNI T+ LI + ++ +++ + L +Y LI+ LC + +++ A
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFT 398
Query: 247 YFVEMIEKGLLPQKVTFETLYR-----GLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
F M+ G LP T+ + + G IQ M+ + LK IT+ + Y
Sbjct: 399 IFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 122/281 (43%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + ++I CK R+ A+ + + PN TY L+ G CR +L
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL---- 255
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +FD M G +P+ ++S +++ + + ++D L M +KGI PTV T
Sbjct: 256 ------AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYT 309
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT + LC G +A ELLG+M + G P+ +T+ A+ LY +M
Sbjct: 310 YTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKML 369
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D L VP TYN LI R + I+ + +Y +I C
Sbjct: 370 ADGL-VPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++A F +M++ G P +T+ TL G + L RL
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRL 469
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 17/302 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT++I G+ + ++D A +M+E G P+ TYNV+++G + S
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS------- 567
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I AE +M +G+ P+V +++ + R + L+ + M+++ P + T
Sbjct: 568 ---ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624
Query: 122 YTSVVKCLCSCGRIEDAE--ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y+S++ LC GR EDAE LL + G P+ +TY K G A +L
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684
Query: 180 MKEDDLCVPNIHTYN-ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M++ L P+ Y +LIG L +++ I+ + L L Y LI LC++
Sbjct: 685 MQKKGL-QPSEEIYRALLIGECKNL-KVESALNIFYSMDTLGFQLHLSDYKALICALCKE 742
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
+EA F M+EK +V + L GL++ +L ++ + T FQ
Sbjct: 743 NFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTL--NFQ 800
Query: 299 NY 300
Y
Sbjct: 801 TY 802
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
SF+ +L + L+ D M GI P++ T+ +++ LC GR+++A+ ++ +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
R P+A TY + + + A ++ +M +D C PN TY+ LI + R
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG-CDPNSVTYSTLINGLCSEGR 287
Query: 206 ----MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
MDM+ E+ KG E + +YT+ + LC+ EA + +M ++G +P
Sbjct: 288 LEEAMDMLEEMVQ--KGIE--PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQ 343
Query: 262 TFETLYRGL 270
TF L GL
Sbjct: 344 TFTALISGL 352
>gi|357117116|ref|XP_003560320.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Brachypodium distachyon]
Length = 598
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 134/276 (48%), Gaps = 13/276 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+++ YT+L+YGWC++ ++D A+ L M GV P+VV +N LL G +RFE
Sbjct: 190 SIRHYTALLYGWCRLGKLDEAKHVLARMKAAGVAPDVVVFNTLLAGFV------AADRFE 243
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A ++ EM R P+ S++ ++ + + M+ KG P TY
Sbjct: 244 ----DAFELAREMERRDCPPNAVSYTTLMQGLGSRGRVDEVMRVFVEMRRKGCAPDSVTY 299
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++V C GR+ E L M R+ + Y FF + ++ ++L +M+E
Sbjct: 300 GTLVSAFCKAGRLSQGYEFLDAMSRDALRVDPGVYLGFFVAHEKKEQLEECLELMERMRE 359
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P++ YN+++ + L +WN ++ S L +D++ ++++GL +
Sbjct: 360 CR-CPPDLGIYNVVLRLSCKLGETKQAMALWNEMENSGLSPGVDTFAIMVNGLVGQGSLV 418
Query: 243 EACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
+AC +F +M+ +GL PQ + L L++ + L
Sbjct: 419 DACSFFKDMVGRGLFVAPQYGVLKDLLNALVRDEKL 454
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
L L + YT L++G C K EA M G+ P V F TL G + +D
Sbjct: 187 LPLSIRHYTALLYGWCRLGKLDEAKHVLARMKAAGVAPDVVVFNTLLAGFVAAD 240
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 129/268 (48%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y S+I G CK +++ A+ +L EMIERG++PNV TY L++G C+ + +R+
Sbjct: 514 PDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRY 573
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
F EM GI P+ + ++ Y + + M + + P V T
Sbjct: 574 ----------FKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRT 623
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ L G+++ A ELL E + G+ P TYN + + A +L+ M
Sbjct: 624 YSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMC 683
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PNI TYN LI ++ RE+++ + G L + +Y +I G C+
Sbjct: 684 QKGIS-PNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNL 742
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
+A + F EM KG+ P + L G
Sbjct: 743 SKAFRLFDEMTLKGVPPDSFVYSALIDG 770
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 137/291 (47%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + Y ++I G+ K + L EM + + P T +++NG+CR S
Sbjct: 409 PDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGS------- 461
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I +A +VF+ M G++P+ ++ ++ + + + Q ++ L M +KG+ P V
Sbjct: 462 ---IEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLC 518
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y SV+ LC ++E+A++ L EM+ G+ P+ TY Y + A + +++M
Sbjct: 519 YNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEML 578
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN LI + I+ + G + D+ +Y+ LIHGL K
Sbjct: 579 GCGI-APNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKL 637
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ A + E +EKGL+P T+ ++ G + + +L + + ++ I+
Sbjct: 638 QGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGIS 688
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +YT+LI G + R A R L M ++GV+P+V+ YN ++ G+C+
Sbjct: 479 PNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCK---------- 528
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A+ EM RG++P+V ++ ++H Y ++ + Q++ M GI P
Sbjct: 529 SRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVV 588
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T+++ C G +A + M+ V P TY+ GAM+L +
Sbjct: 589 CTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFL 648
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L VP++ TYN +I F + ++ ++ + ++ +Y LI+GLC+ +
Sbjct: 649 EKGL-VPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEI 707
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ A + F + KGL VT+ T+ G +S L RL
Sbjct: 708 ERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRL 748
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 126/268 (47%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P YT+LI G+ + A R EM+ RGV+ N+ TYN L+ GVC+ +
Sbjct: 339 PGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEK---- 394
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ + +EM + GI+PD +++ ++ Y + D L+ MK+ + PT T
Sbjct: 395 ------ADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYT 448
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ LC G IEDA + MV GV P+A Y K + A+++ + M
Sbjct: 449 CGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMD 508
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P++ YN +I +M+ ++ + L ++ +Y LIHG C+ +
Sbjct: 509 KKGV-QPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEM 567
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ A +YF EM+ G+ P V L G
Sbjct: 568 QVADRYFKEMLGCGIAPNDVVCTALIDG 595
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 130/268 (48%), Gaps = 12/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ Y++LI+G + ++ A L E +E+G+ P+V TYN +++G C++
Sbjct: 619 PDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGG------- 671
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A ++ + M +GI P++ +++ +++ +A + + + + + + KG+ T
Sbjct: 672 ---IGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVT 728
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C G + A L EM GV P + Y+ R + A+ L+ +
Sbjct: 729 YATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESV 788
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + N L+ F ++ ++ + + D +YT+LI C+
Sbjct: 789 QKGF--ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFL 846
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
KEA Q+FV+M ++ L+P +T+ L G
Sbjct: 847 KEAEQFFVDMQKRNLMPNALTYTALLSG 874
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 145/320 (45%), Gaps = 46/320 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +I G C+ +D A M ++G+ +V TY++L++G +
Sbjct: 269 PSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGK---------- 318
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K A+ + +EM +G++P +++ ++ + R + M +G+ + T
Sbjct: 319 QKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFT 378
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++VK +C G +E A+ LL EM+ G+ P +TYN + Y ++ + L +MK
Sbjct: 379 YNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMK 438
Query: 182 EDDLCVPNIHT--------------------YNILIGMFMALNRMDMVREIWNHVKGSEL 221
+ +L VP +T + I++ + + N + I HV+
Sbjct: 439 KSNL-VPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRF 497
Query: 222 -------------GL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
G+ D+ Y +I GLC+ +K +EA Y VEMIE+GL P T+ L
Sbjct: 498 QEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGAL 557
Query: 267 YRGLIQSDMLRTWRRLKKKL 286
G +S ++ R K++
Sbjct: 558 IHGYCKSGEMQVADRYFKEM 577
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 139/291 (47%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ +V YT LI + +R L EM E+G P++VTYNV++ G+CR + +E
Sbjct: 233 LHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEV--DEA 290
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
FE +K+ D+ +G+ DV ++SI++ + + + + L M KG+ P
Sbjct: 291 FE-----LKKLMDK---KGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHV 342
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT+++ G +A + EM+ GV + TYN K D A L +M
Sbjct: 343 AYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEM 402
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P+ TYN +I ++ V+++ + +K S L + M+I+GLC
Sbjct: 403 IMVGI-KPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGS 461
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++A + F M+ G+ P V + TL +G +Q + R+ K +D++ +
Sbjct: 462 IEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGV 512
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 142/318 (44%), Gaps = 27/318 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH-PNE 59
+P+V Y S+I G+CK I A + M ++G+ PN++TYN L+NG+C+ + E
Sbjct: 653 VPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARE 712
Query: 60 RFEK------------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
F+ + A ++FDEM ++G+ PD +S ++
Sbjct: 713 LFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCR 772
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + +L +KG T ++ +++ C G++ +A +LL +MV V P
Sbjct: 773 KEGNTEKALSLFLESVQKGFAST-SSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHV 831
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY + A + + M++ +L +PN TY L+ + R + +++
Sbjct: 832 TYTILIDYHCKTGFLKEAEQFFVDMQKRNL-MPNALTYTALLSGYNMAGRRSEMFALFDE 890
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ ++ D +++++I ++ + + +M++KG K L L + +
Sbjct: 891 MIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEH 950
Query: 276 LRTWRRLKKKLDEESITF 293
+ ++ +K++E+ +
Sbjct: 951 VSEVLKVLEKIEEQGLNL 968
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 14/283 (4%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
++ LI G+ K D A F G ++ N LL+ + + L RF
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRF---- 223
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
++ M + DV +++ +++ + RA + L M+EKG P++ TY V
Sbjct: 224 ------YNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVV 277
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ LC G +++A EL M + G+ TY+ + +K A + +M L
Sbjct: 278 IGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGL 337
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
P Y LI FM + + + L+L +Y L+ G+C+ ++A
Sbjct: 338 -KPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKAD 396
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
EMI G+ P T+ + G ++ + R+K L E
Sbjct: 397 ALLNEMIMVGIKPDTQTYNNMIEGYLKE---QNTSRVKDLLSE 436
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 51/223 (22%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNG---VCRRASLHPN 58
P+ YT LI CK + AE+F +M +R + PN +TY LL+G RR+ +
Sbjct: 828 PDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFA- 886
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL--HVYSRAHKPQLSL------------ 104
+FDEM + IEPD ++S+++ H+ H L L
Sbjct: 887 ------------LFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVS 934
Query: 105 ---------------------DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLG 143
L ++E+G+ ++AT +++V+C G+++ A +L
Sbjct: 935 KNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLK 994
Query: 144 EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
MVR P + N + D+ A +QM + C
Sbjct: 995 SMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQMAWEVAC 1037
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 118/293 (40%), Gaps = 35/293 (11%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR---------- 52
N Y ++I G+CK + A R EM +GV P+ Y+ L++G CR+
Sbjct: 725 NAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDG-CRKEGNTEKALSL 783
Query: 53 ------------ASLHP-NERFEKT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+SL+ + F K+ + A ++ ++M + ++PD +++I++ + +
Sbjct: 784 FLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKT 843
Query: 98 ----HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Q +D M+++ + P TYT+++ GR + L EM+ + P
Sbjct: 844 GFLKEAEQFFVD----MQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPD 899
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
T++ + D +KL M + V + ++LI + V ++
Sbjct: 900 GVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSK-NVCHVLIDPLCRKEHVSEVLKVL 958
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ L L L + + L+ + K A + M+ +P L
Sbjct: 959 EKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDL 1011
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%)
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N L+ + N++++ +N + + + D+ +YT LI+ KE + EM E
Sbjct: 205 NGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEE 264
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
KG P VT+ + GL ++ + LKK +D++ +
Sbjct: 265 KGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLV 303
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 155/317 (48%), Gaps = 27/317 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRR-----ASL 55
PN Y ++I GWCK+ R+D A + EM+ +G V+P V YN L+ G C + A L
Sbjct: 553 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 612
Query: 56 HPNERFEKTI--------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ + E+ + A ++ +EM +G+ PDV +++I+++ +
Sbjct: 613 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 672
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + +L+ M +G+ TV TYT+++ L G++++ ++L E VR G+ P
Sbjct: 673 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 732
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
YN + + + A ++ +M++ + P+ TYN L+ L R+D R++ +
Sbjct: 733 LYNALINSHSTSGNIDRAFEIMGEMEKKRIA-PDDVTYNTLMRGLCLLGRVDEARKLIDE 791
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ + DL +Y LI G K K+A + EM+ KG P +T+ L +GL ++
Sbjct: 792 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 851
Query: 276 LRTWRRLKKKLDEESIT 292
+ K++ E IT
Sbjct: 852 GDDAENMVKEMVENGIT 868
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 46/273 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI G CK + A M RGV VVTY L+ + ++
Sbjct: 659 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ------- 711
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ +K+FDE RGI PD+ ++ +++ +S + + + + M++K I P T
Sbjct: 712 ---VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 768
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ LC GR+++A +L+ EM G+ P TYN Y + D A+++ +M
Sbjct: 769 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 828
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P + TYN LI GLC+ +
Sbjct: 829 NKGFN-PTLLTYN-----------------------------------ALIQGLCKNGQG 852
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+A EM+E G+ P T+ +L GL D
Sbjct: 853 DDAENMVKEMVENGITPDDSTYISLIEGLTTED 885
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 53 ASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
ASLHP + D R+R + T+F+I+L A KP +L+ L M
Sbjct: 458 ASLHPLLSALPSAPAFALFADMFRLR-LPLCTTTFNIMLRHLCSAGKPARALELLRQMPR 516
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEM-VRNGVSPSAETYNCFFKEYRGRKDAN 171
P TY +V+ CS GR++ A +++ EM R G++P+ TY + +
Sbjct: 517 ----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVD 572
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A+K++ +M P YN LIG + ++D + + + + + +Y +L
Sbjct: 573 EAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 632
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+H L + EA + EM KGL P T+ L G
Sbjct: 633 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILING 670
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 145/307 (47%), Gaps = 11/307 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P +Y +LI G+C++ + A +M R + P+ +TYN L+NG+C+
Sbjct: 188 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL-------- 239
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + AE + EM G++P V +F+ ++ Y A + + L+ M++KGI V
Sbjct: 240 --EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVI 297
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++ SVVK C G+I +A +L +M+ V+P+A+ YN Y D A L +M
Sbjct: 298 SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 357
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + +I TYN+L+ +++D E+ ++ L D+ SY +I C K
Sbjct: 358 KNSGVSA-SIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 416
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
+A + EM + G+ P T+ TL L + + L +++ +++ S
Sbjct: 417 TDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGI 476
Query: 301 HFKPYRR 307
Y R
Sbjct: 477 MVDAYVR 483
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 133/307 (43%), Gaps = 44/307 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y ++I G K ++ R +M+ G +PN+VTYNVLL+G+CR R
Sbjct: 48 VPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAG------R 101
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++T + DEM + PD ++SI+ +R + + L +KG+
Sbjct: 102 MDET----RVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAY 157
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T + ++ LC G++ AE++L +V G+ P+ YN Y +D GA ++ QM
Sbjct: 158 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 217
Query: 181 KE--------------------------DDLCV--------PNIHTYNILIGMFMALNRM 206
K +DL + P++ T+N LI + ++
Sbjct: 218 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 277
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + + ++ + D+ S+ ++ C+ K EA +MI K + P + ++
Sbjct: 278 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 337
Query: 267 YRGLIQS 273
I+S
Sbjct: 338 IDAYIES 344
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN ++Y S+I + + + A + +M GV ++VTYN+LL G+CR + + E
Sbjct: 329 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 388
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
T+RN +G+ PDV S++ ++ +L+ L M + GI PT+ T
Sbjct: 389 IYTLRN----------QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 438
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V L S GR+ D E L +M+ V PS+ Y Y ++ + L ++M
Sbjct: 439 YHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMS 498
Query: 182 E 182
E
Sbjct: 499 E 499
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 116/274 (42%), Gaps = 11/274 (4%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
E P+ +YNV++ G+ R +A KVFDEM G+ P+ +++ ++
Sbjct: 9 EGAPPPDAFSYNVVIAGLWRSGKG----------SDALKVFDEMVDMGVVPNWITYNTMI 58
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ + + + M G P + TY ++ LC GR+++ L+ EM + +
Sbjct: 59 DGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMF 118
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P TY+ F ++ + L+ + + + + +T +IL+ ++ +
Sbjct: 119 PDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVML-GAYTCSILLNGLCKDGKVAKAEQ 177
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ + + L Y LI+G C+ + + A F +M + + P +T+ L GL
Sbjct: 178 VLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLC 237
Query: 272 QSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPY 305
+ +M+ L ++++ + E N Y
Sbjct: 238 KLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAY 271
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 135/261 (51%), Gaps = 15/261 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH-PNERFEKTI 65
Y +LI G+CK ++ A + L EM ERG P+VVT++ ++ +C +L + F +++
Sbjct: 108 YNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESV 167
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
A PD F+I++H +A++ + + M E+GI P V TY S+
Sbjct: 168 ECA-------------PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSL 214
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ LC R+E+A +LL MV+ V P+ TYN Y A +L +M +
Sbjct: 215 IDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGT 274
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
P++ T+N LI F +++D E+ + +K +L +Y +LI GLC+ + EAC
Sbjct: 275 -HPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEAC 333
Query: 246 QYFVEMIEKGLLPQKVTFETL 266
+ EM +G+LP +T+ +L
Sbjct: 334 ELLSEMDGRGILPDIITYNSL 354
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 141/281 (50%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ ++ L++G CK N++ A + + EM ERG+ P+VVTYN L++G+C+ + R
Sbjct: 171 PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCK------SYRM 224
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A ++ + M R + P++ +++ +++ Y + L+ + M + G P V T
Sbjct: 225 EE----ARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVT 280
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++ C +I+ A E+L M + +P+ TYN AN A +L +M
Sbjct: 281 FNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMD 340
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +P+I TYN LIG+F +++ +I N + + D SY L L + +++
Sbjct: 341 GRGI-LPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERF 399
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
EA M + G +P TF +L GL S L R L
Sbjct: 400 DEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHL 440
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 129/274 (47%), Gaps = 13/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y SLI G CK R++ A + L M++R V PN+VTYN L+ G C+
Sbjct: 205 VPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGL--- 261
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTV 119
A ++ + M G PDV +F+ ++ + + K + + L+ MK KG+C P +
Sbjct: 262 -------AHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMK-KGLCAPNL 313
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY ++ LC GR +A ELL EM G+ P TYN + A ++
Sbjct: 314 VTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNL 373
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E + +P+ +Y L + R D + +++ + +L ++ L+ GLC +
Sbjct: 374 MVERGV-IPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSR 432
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ EA M G P T+E L GL ++
Sbjct: 433 RLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKA 466
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 11/257 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +LIYG+CK +A + + MI+ G P+VVT+N L++G C+++
Sbjct: 241 PNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSK------- 293
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A +V M+ P++ ++++++ A + + + L+ M +GI P + T
Sbjct: 294 ---IDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIIT 350
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C +IE A ++ MV GV P +Y + + A L M
Sbjct: 351 YNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMF 410
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D +PN+ T+N L+ R+D R + ++ +Y +L+ GLC+ +
Sbjct: 411 -DAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRV 469
Query: 242 KEACQYFVEMIEKGLLP 258
+A + V M+ +G+ P
Sbjct: 470 DDAKEVLVMMVSEGIQP 486
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 68 AEKVF-DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++F DE+ + + + +++ ++ + +A + + L MKE+G P V T++S+V
Sbjct: 88 AYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIV 147
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ LC+ G + A + E V +P + +N + A ++ +M E +
Sbjct: 148 QALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGI- 204
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VP++ TYN LI RM+ R++ + ++ +L +Y LI+G C+ A Q
Sbjct: 205 VPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQ 264
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQ 272
MI+ G P VTF +L G Q
Sbjct: 265 LIERMIQSGTHPDVVTFNSLISGFCQ 290
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 8/185 (4%)
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ C G +E A +LL EM G SP T++ + + + AM+ +R+
Sbjct: 107 TYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRES 166
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E C P+ +NIL+ N++ R++ + + D+ +Y LI GLC+ +
Sbjct: 167 VE---CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYR 223
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFGS 295
+EA Q M+++ + P VT+ TL G ++ +L +++ + + +TF S
Sbjct: 224 MEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNS 283
Query: 296 EFQNY 300
+
Sbjct: 284 LISGF 288
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ + SL+ G C R+D A L M G +P TY VL+ G+C+
Sbjct: 415 IPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGR------ 468
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL---DKLNFMKEKGICP 117
+ +A++V M GI+P V+S ++H +R K L+L D++ + K P
Sbjct: 469 ----VDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDP 524
Query: 118 TVATYTSVVKCL 129
+ VK L
Sbjct: 525 SYQKLLEFVKVL 536
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 7/150 (4%)
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
GE + N T NC + + + A +++R C N TYN LIG F
Sbjct: 63 GESIHNNF-----TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCK 117
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
M+ ++ +K D+ +++ ++ LC A QYF E +E P V
Sbjct: 118 AGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVL 175
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
F L GL +++ L R++ +++ E I
Sbjct: 176 FNILVHGLCKANQLSEARQMIEEMSERGIV 205
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 145/307 (47%), Gaps = 11/307 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P +Y +LI G+C++ + A +M R + P+ +TYN L+NG+C+
Sbjct: 366 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL-------- 417
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + AE + EM G++P V +F+ ++ Y A + + L+ M++KGI V
Sbjct: 418 --EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVI 475
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++ SVVK C G+I +A +L +M+ V+P+A+ YN Y D A L +M
Sbjct: 476 SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 535
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + +I TYN+L+ +++D E+ ++ L D+ SY +I C K
Sbjct: 536 KNSGVSA-SIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
+A + EM + G+ P T+ TL L + + L +++ +++ S
Sbjct: 595 TDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGI 654
Query: 301 HFKPYRR 307
Y R
Sbjct: 655 MVDAYVR 661
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 133/307 (43%), Gaps = 44/307 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y ++I G K ++ R +M+ G +PN+VTYNVLL+G+CR R
Sbjct: 226 VPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAG------R 279
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++T + DEM + PD ++SI+ +R + + L +KG+
Sbjct: 280 MDET----RVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAY 335
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T + ++ LC G++ AE++L +V G+ P+ YN Y +D GA ++ QM
Sbjct: 336 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395
Query: 181 KE--------------------------DDLCV--------PNIHTYNILIGMFMALNRM 206
K +DL + P++ T+N LI + ++
Sbjct: 396 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 455
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + + ++ + D+ S+ ++ C+ K EA +MI K + P + ++
Sbjct: 456 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 515
Query: 267 YRGLIQS 273
I+S
Sbjct: 516 IDAYIES 522
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN ++Y S+I + + + A + +M GV ++VTYN+LL G+CR + + E
Sbjct: 507 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 566
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
T+RN +G+ PDV S++ ++ +L+ L M + GI PT+ T
Sbjct: 567 IYTLRN----------QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 616
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V L S GR+ D E L +M+ V PS+ Y Y ++ + L ++M
Sbjct: 617 YHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMS 676
Query: 182 E 182
E
Sbjct: 677 E 677
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 127/306 (41%), Gaps = 13/306 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEM--IERGVEPNVVTYNVLLNGVCRRASLHPNE 59
P+ + ++ +D+A + M E P+ +YNV++ G+ R
Sbjct: 155 PDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGK----- 209
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+A KVFDEM G+ P+ +++ ++ + + + + M G P +
Sbjct: 210 -----GSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNI 264
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY ++ LC GR+++ L+ EM + + P TY+ F ++ + L+ +
Sbjct: 265 VTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAE 324
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ + + +T +IL+ ++ ++ + + L Y LI+G C+ +
Sbjct: 325 SLKKGVML-GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVR 383
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ A F +M + + P +T+ L GL + +M+ L ++++ + E N
Sbjct: 384 DLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFN 443
Query: 300 YHFKPY 305
Y
Sbjct: 444 TLIDAY 449
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 11/300 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V YT LI G+CK + A R EM+ R V PNVVTY L +G+C++
Sbjct: 426 DVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGD-------- 477
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+R A ++ EM +G+E +V +++ +++ + + ++ + M+ G V TY
Sbjct: 478 --VRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTY 535
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ LC G + A +L EM+ G+ PS TYN + G KL M E
Sbjct: 536 TTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLE 595
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
++ PN+ TYN L+ + M EI+ + E+ + ++Y +LI G C+ + K
Sbjct: 596 KNV-RPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMK 654
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
EA + EMIEKGL ++ L R L + R K+ E +T + +++
Sbjct: 655 EALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYM 714
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 135/258 (52%), Gaps = 17/258 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+L G CK + A L EM +G+E NV TYN L+NG+C+ +L
Sbjct: 460 PNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNL------ 513
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ EM G DV +++ ++ ++ + + + L M +KGI P++AT
Sbjct: 514 ----EQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIAT 569
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C GR+E ++LL M+ V P+ TYN K+Y K+ ++Y+ M
Sbjct: 570 YNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMH 629
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDL--DSYTMLIHGLCEK 238
++ PN +TYNILI G A N M ++ H + E GL L SY+ LI L +K
Sbjct: 630 SQEV-APNENTYNILIKGHCKARN---MKEALYFHQEMIEKGLRLTASSYSALIRLLNKK 685
Query: 239 QKWKEACQYFVEMIEKGL 256
+K+ EA +F +M +GL
Sbjct: 686 KKFSEARVFFDKMRNEGL 703
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 138/303 (45%), Gaps = 16/303 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N +YTS+I C ++ A R L +M GV + V + +++G C + L
Sbjct: 321 NATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDL------- 373
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A ++F+EM+ RG+ D + + +++ RA + + + L M +KG+ V TY
Sbjct: 374 ---AAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTY 430
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++ C G + +A + EMV V+P+ TY + D A +L +M
Sbjct: 431 TVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCN 490
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L + N++TYN LI ++ I ++ + D+ +YT LI LC+ ++
Sbjct: 491 KGLEL-NVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFD 549
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGSEF 297
A EM++KG+ P T+ L G S + ++ L+K + +T+ S
Sbjct: 550 RAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLM 609
Query: 298 QNY 300
+ Y
Sbjct: 610 KQY 612
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 14/245 (5%)
Query: 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
NV ++N+LL + L ++A + FDEM PDV ++ ++H Y
Sbjct: 254 NVCSHNILLKALLSAGRL----------KDACQHFDEM---SSPPDVVTYGTMVHGYCVR 300
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ + ++ L+ M KG+ YTSV+ LC+ G++ DA +L +M +GV+ A +
Sbjct: 301 GELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVF 360
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
+ + D A +L+ +M++ L + T+ LI + + +
Sbjct: 361 TTVISGFCSKGDLAAARRLFEEMQKRGLAADRV-THTALINGLCRAGELKEADRVLQEMV 419
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
L +D+ +YT+LI G C++ EA + EM+ + + P VT+ L GL + +R
Sbjct: 420 DKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVR 479
Query: 278 TWRRL 282
L
Sbjct: 480 AANEL 484
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 124/285 (43%), Gaps = 14/285 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV + L+ R+ A + EM P+VVTY +++G C R L
Sbjct: 254 NVCSHNILLKALLSAGRLKDACQHFDEM---SSPPDVVTYGTMVHGYCVRGEL------- 303
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
NA K+ DEM +G+E + T ++ V+ + + +L L M G+ +
Sbjct: 304 ---ENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVF 360
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+V+ CS G + A L EM + G++ T+ + A ++ ++M +
Sbjct: 361 TTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVD 420
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L V ++ TY +LI + M + N + G + ++ +YT L GLC++ +
Sbjct: 421 KGLDV-DVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVR 479
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
A + EM KGL T+ +L GL + L R+ +++
Sbjct: 480 AANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEME 524
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 80/207 (38%), Gaps = 38/207 (18%)
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
K A++ ++ CL S ELL + + G+SPS E+ N R +
Sbjct: 194 KAFSSDPASFDLLLLCLPSA-------ELLRRLRQYGLSPSPESCNAVL----SRLPLDE 242
Query: 173 AMKLYRQMKEDDLCV---------------------------PNIHTYNILIGMFMALNR 205
A+ L+R++ + ++C P++ TY ++ +
Sbjct: 243 AIALFRELPDKNVCSHNILLKALLSAGRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGE 302
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
++ ++ + + L + YT +I LC K + +A + +M G+ V F T
Sbjct: 303 LENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTT 362
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ G L RRL +++ + +
Sbjct: 363 VISGFCSKGDLAAARRLFEEMQKRGLA 389
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ NV + +L+ CK +++ A E+I +G+ PNVV+YN ++ G CR+
Sbjct: 364 LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRK-------- 415
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A KV+ EM G P+ +F+I++ Y + + + + MK+ I PT
Sbjct: 416 --DNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT 473
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T ++K LC GR + +L + V G P+ YN + + N A +YR+M
Sbjct: 474 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREM 533
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + P+ TY LI F N +D+ ++ N +K L +D+ +Y LI G C+++
Sbjct: 534 CEVGI-TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRD 592
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K A + E+ GL P + + ++ G + + L KK+ E I
Sbjct: 593 MKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGI 643
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 142/290 (48%), Gaps = 12/290 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ + TSL+ G+C + A + E+ E G+ PN VTY+VL++G C+ +
Sbjct: 262 NLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGN-------- 313
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I A + + EM+ +GI V S + +L Y + Q + N E G+ V T+
Sbjct: 314 --IEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTF 370
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC G++ +A L E++ G+SP+ +YN + + + N A K+Y++M +
Sbjct: 371 NTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD 430
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ PN T+ IL+ + ++ I++ +K + + + ++I GLC+ +
Sbjct: 431 NGF-TPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSF 489
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
E F + + +G +P + + T+ G I+ + + +++ E IT
Sbjct: 490 EGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGIT 539
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 138/325 (42%), Gaps = 46/325 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I G C+ + I+ A + EM++ G PN VT+ +L++G ++
Sbjct: 400 PNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGD------- 452
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN------------- 108
I NA +F M+ I P T+ I++ +A + D N
Sbjct: 453 ---IENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMP 509
Query: 109 -------FMKEK---------------GICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F+KE GI P+ TYTS++ C I+ A +LL +M
Sbjct: 510 YNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMK 569
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
R G+ + Y + R+D A +L +++ L PN YN +I F +N +
Sbjct: 570 RKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLS-PNRFIYNSMITGFKNMNNV 628
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ +++ + + DL +YT LI GL + + A EM+ KG+LP L
Sbjct: 629 EEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVL 688
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESI 291
GL R++ + ++ +++
Sbjct: 689 INGLCNKGQFENARKILEDMNGKNM 713
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 131/287 (45%), Gaps = 13/287 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P +I G CK R + + +G P + YN +++G +
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIK--------- 519
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I A V+ EM GI P +++ ++ + + + L+L LN MK KG+ +
Sbjct: 520 -EGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIK 578
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C ++ A ELL E+ G+SP+ YN ++ + A+ LY++M
Sbjct: 579 AYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 638
Query: 181 KEDDLCVP-NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ +P ++ TY LI + R+ +I + + D ++T+LI+GLC K
Sbjct: 639 VNEG--IPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKG 696
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+++ A + +M K ++P + + TL G + L+ RL ++
Sbjct: 697 QFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEM 743
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 28/222 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
P+ YTSLI G+CK N ID+A + L +M +G++ ++ Y L++G C+R
Sbjct: 540 PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHEL 599
Query: 53 ------ASLHPNERFE--------KTIRNAEKVFD---EMRVRGIEPDVTSFSIVLHVYS 95
A L PN RF K + N E+ D +M GI D+ +++ ++
Sbjct: 600 LNELRGAGLSPN-RFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 658
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
++ + + D M KGI P +T ++ LC+ G+ E+A ++L +M + PS
Sbjct: 659 KSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVL 718
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
YN + + A +L+ +M + L VP+ TY+IL+
Sbjct: 719 IYNTLIAGHFKEGNLQEAFRLHDEMLDRGL-VPDNITYDILV 759
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 2/217 (0%)
Query: 50 CRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF 109
C + P + E I AE+ F + + RG+E D ++SI +H+ +L L
Sbjct: 159 CTKLYNFPLDIQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLRE 218
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M+ G P T+TSV+ G + +A L +MV G S + K Y + +
Sbjct: 219 MRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGN 278
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A+ L ++ E L VPN TY++LI ++ E ++ +K + + S
Sbjct: 279 LRSALVLVNEISESGL-VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLN 337
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ G + Q W+ A F + +E G L TF TL
Sbjct: 338 SILEGYLKCQSWQNAFTMFNDALESG-LANVFTFNTL 373
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNG 48
+P+V +Y +LI G K + A R EM++RG+ P+ +TY++L+NG
Sbjct: 714 IPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G I +AE+ + GV E Y+ F + ++ A+ L R+M+ P
Sbjct: 172 GNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTF 231
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
+++ N + +R + V + ++L T L+ G C + + A E+
Sbjct: 232 TSVITACVKEGNVAEALRLKDDMVNCGK-SMNLAVATSLMKGYCMQGNLRSALVLVNEIS 290
Query: 253 EKGLLPQKVTFETLYRG 269
E GL+P KVT+ L G
Sbjct: 291 ESGLVPNKVTYSVLIDG 307
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 137/294 (46%), Gaps = 26/294 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y +L+ G C+ +++A++ EMI G+ P++VTY +L+NG C+ SL + F
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466
Query: 62 ----------------------EKTIRNAEKVF---DEMRVRGIEPDVTSFSIVLHVYSR 96
E + + + F +EM +G PD+ +++V+ +
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + L M G+ P TYTS++ GR+ E+ EM+ G++PS T
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVT 586
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + G+ A + +M+E + +PN+ TYN LI + RMD + +
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQEKGI-LPNVITYNSLINGLCKVRRMDQAYNFFAEM 645
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + SYT+LI+ C W+EA + +M+++G+ P T L + L
Sbjct: 646 VEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 138/297 (46%), Gaps = 38/297 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +LIYG+C++ + A E+ + P +VTYN LL+G+CR+ L ++
Sbjct: 371 LPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQ 430
Query: 61 FEKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFS------I 89
+ + N A++ FDEM G+E D +++ +
Sbjct: 431 LKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL 490
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
L SRA Q M KG P + Y VV LC G +E+A ELL +MV +G
Sbjct: 491 KLGDTSRAFSLQ------EEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDG 544
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
V P TY + +++ +M L P++ TY +LI R++
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGL-TPSVVTYTVLIHGHAGKGRLERA 603
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ ++ + ++ +Y LI+GLC+ ++ +A +F EM+EKG+ P K ++ L
Sbjct: 604 FIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTIL 660
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 132/303 (43%), Gaps = 44/303 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y S IYG CK+ R+ A + L +M+ + P+VV+YN L+ G CR +L
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNL------ 390
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +FDE+R + P + +++ +L R + +++ M +GI P + T
Sbjct: 391 ----MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVT 446
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +V C G + A+E EM+ G+ + Y D + A L +M
Sbjct: 447 YTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEML 506
Query: 182 E--------------DDLC--------------------VPNIHTYNILIGMFMALNRMD 207
D LC +P+ TY +I + R+
Sbjct: 507 AKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLR 566
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
REI+ + L + +YT+LIHG K + + A YF EM EKG+LP +T+ +L
Sbjct: 567 KGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLI 626
Query: 268 RGL 270
GL
Sbjct: 627 NGL 629
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 125/255 (49%), Gaps = 11/255 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y +L+ +CK ++ L EM RG PN VTYNVL+NG+ ++ F
Sbjct: 232 PTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKG------EF 285
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A+ + EM G++ +++ +++ Y +L M KG PTVAT
Sbjct: 286 EQ----AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVAT 341
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S + LC GR+ DA + L +M+ N + P +YN Y + A L+ +++
Sbjct: 342 YNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELR 401
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P I TYN L+ +++ +++ + + D+ +YT+L++G C+
Sbjct: 402 SIYL-FPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSL 460
Query: 242 KEACQYFVEMIEKGL 256
A ++F EM+ +GL
Sbjct: 461 SMAQEFFDEMLHEGL 475
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 132/290 (45%), Gaps = 11/290 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+VK+ LI+ + K + ++ +MI+ + P+V N +L + R L
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILR-ILRDKDL------- 214
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A +V+ M GI+P + +++ +L Y + K Q LD L+ M+ +G P TY
Sbjct: 215 --MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTY 272
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ L G E A+ L+GEM++ G+ SA TYN Y + A+ L +M
Sbjct: 273 NVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVL 332
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P + TYN I L RM + + + + L D+ SY LI+G C
Sbjct: 333 KG-ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLM 391
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A F E+ L P VT+ TL GL + L ++LK ++ E I
Sbjct: 392 KAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 28/171 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y SLI G CK+ R+D A F EM+E+G+ PN +Y +L+N C +
Sbjct: 616 LPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNW----- 670
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLD-KLNFMKEKGICPT- 118
+ A ++ +M RG++PD + S +L QL D KL + PT
Sbjct: 671 -----QEALSLYKQMLDRGVQPDSCTHSALLK--------QLGKDCKLQAVHGTSTMPTA 717
Query: 119 ----VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR 165
++ L S I + + E +R + T F YR
Sbjct: 718 KVDLLSQTVGAATALTSVSSIAENGHITKEQLRQNIP----TKKQFVDPYR 764
>gi|224107981|ref|XP_002314676.1| predicted protein [Populus trichocarpa]
gi|222863716|gb|EEF00847.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 136/278 (48%), Gaps = 11/278 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y L G+CK A + + EM ERG PNVV+Y + +K R
Sbjct: 278 YNILSSGYCKARMFGDARKTMEEMEERGFHPNVVSYTAFIEAYGE----------QKDFR 327
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
N E + +EM+ +G PD+ ++++ + +A + +L+ +K G Y S++
Sbjct: 328 NVEIILNEMQEKGCPPDLITYTVYIRALGKARQINKALEICEEIKRNGFVLGTQFYCSLI 387
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC GR++DA + ++ + GV Y A+KL +M+ED C
Sbjct: 388 HSLCLSGRLKDAWNIFEDVEKQGVGRDLGMYKAMISAACALSQDESALKLLHKMEEDS-C 446
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++ TY L+ M M M++ + NH+ +++ +D+ +Y +L+HGL ++ K K AC
Sbjct: 447 KPDVQTYAPLLKMCCRKKSMKMLKFLLNHMFENDVSIDIVTYDLLVHGLRKQGKLKYACF 506
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
+F E + KG++P T++ L L + +M +++K
Sbjct: 507 FFQEAVLKGMVPCDKTYKILLEELERKNMAEMKGKIEK 544
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 1/186 (0%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
D S++I+ Y +A + + M+E+G P V +YT+ ++ + E +L
Sbjct: 274 DYRSYNILSSGYCKARMFGDARKTMEEMEERGFHPNVVSYTAFIEAYGEQKDFRNVEIIL 333
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
EM G P TY + + + N A+++ ++K + V Y LI
Sbjct: 334 NEMQEKGCPPDLITYTVYIRALGKARQINKALEICEEIKRNGF-VLGTQFYCSLIHSLCL 392
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
R+ I+ V+ +G DL Y +I C + + A + +M E P T
Sbjct: 393 SGRLKDAWNIFEDVEKQGVGRDLGMYKAMISAACALSQDESALKLLHKMEEDSCKPDVQT 452
Query: 263 FETLYR 268
+ L +
Sbjct: 453 YAPLLK 458
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 10/177 (5%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
+ Y SLI+ C R+ A ++ ++GV ++ Y +++ C +L +E
Sbjct: 380 TQFYCSLIHSLCLSGRLKDAWNIFEDVEKQGVGRDLGMYKAMISAAC---ALSQDE---- 432
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+A K+ +M +PDV +++ +L + R ++ LN M E + + TY
Sbjct: 433 ---SALKLLHKMEEDSCKPDVQTYAPLLKMCCRKKSMKMLKFLLNHMFENDVSIDIVTYD 489
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+V L G+++ A E V G+ P +TY +E + A K+ + M
Sbjct: 490 LLVHGLRKQGKLKYACFFFQEAVLKGMVPCDKTYKILLEELERKNMAEMKGKIEKLM 546
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ Y L+ C+ + M + L M E V ++VTY++L++G+ R
Sbjct: 448 PDVQTYAPLLKMCCRKKSMKMLKFLLNHMFENDVSIDIVTYDLLVHGL----------RK 497
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQL 102
+ ++ A F E ++G+ P ++ I+L R + ++
Sbjct: 498 QGKLKYACFFFQEAVLKGMVPCDKTYKILLEELERKNMAEM 538
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 145/286 (50%), Gaps = 12/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ YT+L+ WC + A R EM+E+G++P+VV +N ++ G+ R H
Sbjct: 327 PDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQH----- 381
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+F+ M+ +G P+V ++++++ + + K ++++ M+E P VAT
Sbjct: 382 -----EAVKMFELMKAKGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVAT 436
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + R++ +L EM + G P A TYN K RK + A ++Y++M
Sbjct: 437 YTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMI 496
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L P IHTYN+++ F+ M +W + + D++SYT+ I G +
Sbjct: 497 KKGL-DPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTVFISGHIRHGR 555
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+EA +Y EMI KG+ ++ L ++ L L +K+
Sbjct: 556 PEEAYKYIEEMINKGMKAPQIDCNKFAADLSKAGKLDMLYELAQKV 601
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 7/241 (2%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
I+NA VF+ MR G + V SF+ +L + + + + M + P + +YT+
Sbjct: 276 IKNAVGVFELMRKNGFDDGVESFNCLLVALANEGLGREARQVFDKMLGQ-YSPDLRSYTA 334
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ C+ + +A + EM+ G+ P +N + + + A+K++ MK
Sbjct: 335 LMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKG 394
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
PN+ TY +LI +MDM E + ++ + D+ +YT L+ G ++
Sbjct: 395 P-PPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRV 453
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGL----IQSDMLRTWRRL-KKKLDEESITFGSEFQN 299
EM +KG P T+ L + L + D R ++++ KK LD T+ ++
Sbjct: 454 TAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKS 513
Query: 300 Y 300
Y
Sbjct: 514 Y 514
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 96/242 (39%), Gaps = 5/242 (2%)
Query: 27 LGEMIERGVEPNV-VTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVT 85
+ ++I G + N+ + L +C L RF+ R + + F G T
Sbjct: 167 IADVIAAGADANLEAALSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATASGGFTHTT 226
Query: 86 -SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++ +L + + + + + L M + G ++ + +K + G I++A +
Sbjct: 227 ITYCKMLLILGKTRQFESMVALLQEMGKAGTL-SMDAFKVAIKSFAAAGEIKNAVGVFEL 285
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
M +NG E++NC A +++ +M P++ +Y L+ +
Sbjct: 286 MRKNGFDDGVESFNCLLVALANEGLGREARQVFDKMLGQ--YSPDLRSYTALMLAWCNAR 343
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+ +WN + + D+ + +I GL Q+ EA + F M KG P T+
Sbjct: 344 NLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPPPNVWTYT 403
Query: 265 TL 266
L
Sbjct: 404 ML 405
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 149/290 (51%), Gaps = 14/290 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YTSLI CKI + A R EM++ GVE NVVTY L++G+C
Sbjct: 267 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD--------- 317
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ ++ AE++F +M G+ P++ S++ ++H + +A +L+ LN +K +GI P +
Sbjct: 318 -AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 376
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y + + LCS +IE A+ ++ EM G+ ++ Y Y + + L +M
Sbjct: 377 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 436
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEK 238
KE D+ V + T+ +LI + + +N + ++ GL ++ +T +I GLC+
Sbjct: 437 KELDIEV-TVVTFCVLIDGLCKNKLVSKAVDYFNRIS-NDFGLQANAAIFTAMIDGLCKD 494
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ + A F +M++KGL+P + + +L G + + L+ K+ E
Sbjct: 495 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 544
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 135/275 (49%), Gaps = 17/275 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + L++ + K+ + D +RF +MI G P V TYN++++ +C+
Sbjct: 93 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK---------- 142
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE-KGIC--PT 118
E + A +F+EM+ RG+ PD +++ ++ + + + D + F +E K +C P
Sbjct: 143 EGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD---DTVCFFEEMKDMCCEPD 199
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V TY +++ C C G++ E EM NG+ P+ +Y+ + A+K Y
Sbjct: 200 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 259
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M+ L VPN +TY LI + + + N + + ++ +YT LI GLC+
Sbjct: 260 DMRRVGL-VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA 318
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ KEA + F +M G++P ++ L G +++
Sbjct: 319 ERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 353
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 11/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y S+I G+ K+ R+D F EM + EP+V+TYN L+N C+ L
Sbjct: 162 VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 221
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F + EM+ G++P+V S+S ++ + + Q ++ M+ G+ P
Sbjct: 222 F----------YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 271
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS++ C G + DA L EM++ GV + TY + A +L+ +M
Sbjct: 272 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 331
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +PN+ +YN LI F+ MD E+ N +KG + DL Y I GLC +K
Sbjct: 332 DTAGV-IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 390
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ A EM E G+ + + TL +S
Sbjct: 391 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 423
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 7/205 (3%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE---KGICPTVAT 121
+ A + F +M+ + P S + +LH +++ K D F K+ G PTV T
Sbjct: 76 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD---DVKRFFKDMIGAGARPTVFT 132
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C+C G +E A L EM G+ P TYN + + + + +MK
Sbjct: 133 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 192
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C P++ TYN LI F ++ + E + +KG+ L ++ SY+ L+ C++
Sbjct: 193 -DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 251
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
++A +++V+M GL+P + T+ +L
Sbjct: 252 QQAIKFYVDMRRVGLVPNEYTYTSL 276
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 18/265 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y +LI+G+ K +D A L E+ RG++P+++ Y + G+C
Sbjct: 337 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS--------- 387
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK I A+ V +EM+ GI+ + ++ ++ Y ++ P L L+ MKE I TV
Sbjct: 388 LEK-IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 446
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+ ++ LC + A + + + G+ +A + A L+ Q
Sbjct: 447 TFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQ 506
Query: 180 MKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLC 236
M + L VP+ Y L+ G F N ++ + K +E+G+ LD +YT L+ GL
Sbjct: 507 MVQKGL-VPDRTAYTSLMDGNFKQGN---VLEALALRDKMAEIGMKLDLLAYTSLVWGLS 562
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKV 261
+ ++A + EMI +G+ P +V
Sbjct: 563 HCNQLQKARSFLEEMIGEGIHPDEV 587
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 1/168 (0%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
MK + P + ++ G+ +D + +M+ G P+ TYN D
Sbjct: 86 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 145
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A L+ +MK L VP+ TYN +I F + R+D + +K D+ +Y
Sbjct: 146 VEAARGLFEEMKFRGL-VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 204
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
LI+ C+ K +++ EM GL P V++ TL + M++
Sbjct: 205 ALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 252
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ NV + +L+ CK +++ A E+I +G+ PNVV+YN ++ G CR+
Sbjct: 246 LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRK-------- 297
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A KV+ EM G P+ +F+I++ Y + + + + MK+ I PT
Sbjct: 298 --DNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT 355
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T ++K LC GR + +L + V G P+ YN + + N A +YR+M
Sbjct: 356 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREM 415
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + P+ TY LI F N +D+ ++ N +K L +D+ +Y LI G C+++
Sbjct: 416 CEVGI-TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRD 474
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K A + E+ GL P + + ++ G + + L KK+ E I
Sbjct: 475 MKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGI 525
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 142/290 (48%), Gaps = 12/290 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ + TSL+ G+C + A + E+ E G+ PN VTY+VL++G C+ +
Sbjct: 144 NLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGN-------- 195
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I A + + EM+ +GI V S + +L Y + Q + N E G+ V T+
Sbjct: 196 --IEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTF 252
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC G++ +A L E++ G+SP+ +YN + + + N A K+Y++M +
Sbjct: 253 NTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD 312
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ PN T+ IL+ + ++ I++ +K + + + ++I GLC+ +
Sbjct: 313 NGF-TPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSF 371
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
E F + + +G +P + + T+ G I+ + + +++ E IT
Sbjct: 372 EGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGIT 421
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 138/325 (42%), Gaps = 46/325 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I G C+ + I+ A + EM++ G PN VT+ +L++G ++
Sbjct: 282 PNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGD------- 334
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN------------- 108
I NA +F M+ I P T+ I++ +A + D N
Sbjct: 335 ---IENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMP 391
Query: 109 -------FMKEK---------------GICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F+KE GI P+ TYTS++ C I+ A +LL +M
Sbjct: 392 YNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMK 451
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
R G+ + Y + R+D A +L +++ L PN YN +I F +N +
Sbjct: 452 RKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLS-PNRFIYNSMITGFKNMNNV 510
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ +++ + + DL +YT LI GL + + A EM+ KG+LP L
Sbjct: 511 EEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVL 570
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESI 291
GL R++ + ++ +++
Sbjct: 571 INGLCNKGQFENARKILEDMNGKNM 595
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 131/287 (45%), Gaps = 13/287 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P +I G CK R + + +G P + YN +++G +
Sbjct: 351 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIK--------- 401
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I A V+ EM GI P +++ ++ + + + L+L LN MK KG+ +
Sbjct: 402 -EGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIK 460
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C ++ A ELL E+ G+SP+ YN ++ + A+ LY++M
Sbjct: 461 AYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 520
Query: 181 KEDDLCVP-NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ +P ++ TY LI + R+ +I + + D ++T+LI+GLC K
Sbjct: 521 VNEG--IPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKG 578
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+++ A + +M K ++P + + TL G + L+ RL ++
Sbjct: 579 QFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEM 625
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 28/222 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
P+ YTSLI G+CK N ID+A + L +M +G++ ++ Y L++G C+R
Sbjct: 422 PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHEL 481
Query: 53 ------ASLHPNERFE--------KTIRNAEKVFD---EMRVRGIEPDVTSFSIVLHVYS 95
A L PN RF K + N E+ D +M GI D+ +++ ++
Sbjct: 482 LNELRGAGLSPN-RFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 540
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
++ + + D M KGI P +T ++ LC+ G+ E+A ++L +M + PS
Sbjct: 541 KSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVL 600
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
YN + + A +L+ +M + L VP+ TY+IL+
Sbjct: 601 IYNTLIAGHFKEGNLQEAFRLHDEMLDRGL-VPDNITYDILV 641
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 12/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ L+ + N A +M+ GV + T +V+L RA L
Sbjct: 3 PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVML-----RACLK----- 52
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I AE+ F + + RG+E D ++SI +H+ +L L M+ G P T
Sbjct: 53 EGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGT 112
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+TSV+ G + +A L +MV G S + K Y + + A+ L ++
Sbjct: 113 FTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEIS 172
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L VPN TY++LI ++ E ++ +K + + S ++ G + Q W
Sbjct: 173 ESGL-VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 231
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+ A F + +E G L TF TL
Sbjct: 232 QNAFTMFNDALESG-LANVFTFNTL 255
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNG 48
+P+V +Y +LI G K + A R EM++RG+ P+ +TY++L+NG
Sbjct: 596 IPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 133/270 (49%), Gaps = 11/270 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + LI G CK+ R+ A + MI+RG +P++V+YN L+NG C S
Sbjct: 279 PDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGS------- 331
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A++VFD+M R P+V S+ +++ Y + ++ L M K + P T
Sbjct: 332 ---VGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVT 388
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ L GR +L+ M +G TYN +Y + + A+ L++ +
Sbjct: 389 YNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHII 448
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + PNI TYNIL+ R+ +EI+ + ++ +Y ++IHGLC++
Sbjct: 449 EIGIS-PNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFL 507
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
EA +M+ LP +TF+T+ R ++
Sbjct: 508 DEAEALLYKMVNNNYLPNYITFDTIVRAIL 537
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 142/290 (48%), Gaps = 12/290 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ MY ++I G CK +D A EM+E G+E +V +YN +++G C RF
Sbjct: 208 PNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVG------RF 261
Query: 62 EKTIRNAEKVFDEMRVRG-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K+ DEM VRG + PDV +F+I++ + + + + + M ++G P +
Sbjct: 262 QA----AVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIV 317
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y +++ C G + +A+++ +MV P+ +Y Y + + AM L +M
Sbjct: 318 SYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEM 377
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+L VP+ TYN L+ R ++ ++ S DL +Y +L+ + +K
Sbjct: 378 HNKNL-VPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEK 436
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ +A F +IE G+ P T+ L GL +S L+ + + + L +
Sbjct: 437 FDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKG 486
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 28/293 (9%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNERF 61
+V Y S+I+G+C + R A + L EM+ RG V P+V T+N+L++G+C+
Sbjct: 244 DVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGR------- 296
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A V M RG +PD+ S++ +++ Y + + + M E+ P V +
Sbjct: 297 ---VSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVIS 353
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +++A LL EM + P TYNC +G K R +
Sbjct: 354 YCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLL---------DGLSKSGRSLY 404
Query: 182 EDDLC--------VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
E DL ++ TYN+L+ + + D ++ H+ + ++ +Y +L+
Sbjct: 405 EWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLD 464
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
GLC+ + K A + F + KG P T+ + GL + L L K+
Sbjct: 465 GLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKM 517
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 131/303 (43%), Gaps = 21/303 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++ LI + ++ ++ A LG +++ G + +V L+ G+C +
Sbjct: 103 PSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGR------- 155
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + E RG D + +++ + K + ++ MK+ + P +
Sbjct: 156 ---VLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIM 212
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V+ LC G +++A L EMV NG+ +YN + A+KL +M
Sbjct: 213 YNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMV 272
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P+++T+NILI L R+ + + D+ SY L++G C
Sbjct: 273 VRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSV 332
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
EA Q F +M+E+ LP +++ TL G + M+ +E++ +E N +
Sbjct: 333 GEAKQVFDKMVERTALPNVISYCTLINGYCKVRMV-----------DEAMVLLTEMHNKN 381
Query: 302 FKP 304
P
Sbjct: 382 LVP 384
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-SLHPNE 59
+PNV Y +LI G+CK+ +D A L EM + + P+ VTYN LL+G+ + SL+ +
Sbjct: 348 LPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWD 407
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
E MR G D+ +++++L Y + K +L + E GI P +
Sbjct: 408 LVE-----------AMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNI 456
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLY 177
TY ++ LC GR++ A+E+ + G P+ TYN G D A+ LY
Sbjct: 457 RTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEAL-LY 515
Query: 178 RQMKEDDLCVPNIHTYNILI 197
+ + + L PN T++ ++
Sbjct: 516 KMVNNNYL--PNYITFDTIV 533
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 2/192 (1%)
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
I+P + +FSI+++ +++ + + L + + G V T+++K LC GR+ +A
Sbjct: 101 IKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAV 160
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
LL E V G Y A++++ +MK+ + PN+ YN +I
Sbjct: 161 SLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRV-YPNLIMYNTVIDG 219
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG-LLP 258
+D + + + + LD+ SY +IHG C +++ A + EM+ +G + P
Sbjct: 220 LCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYP 279
Query: 259 QKVTFETLYRGL 270
TF L GL
Sbjct: 280 DVYTFNILIDGL 291
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 168 KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS 227
K N + LY ++ P++ T++ILI F L +M + ++ +D+
Sbjct: 83 KRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRI 142
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLK 283
T L+ GLC K + EA E +++G +V + T+ GL + D ++ + ++K
Sbjct: 143 LTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMK 202
Query: 284 K 284
K
Sbjct: 203 K 203
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 155/345 (44%), Gaps = 56/345 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNER 60
P++ Y+++I G+CK +D A L EM+ R G+ P+VVTY +++G+CR + +R
Sbjct: 43 PDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKM---DR 99
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLD----------KLNFM 110
+ +R EM+++G+EPD +FS ++ + A K +L +L+ +
Sbjct: 100 ACEMVR-------EMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAV 152
Query: 111 KEK----GIC------------------------PTVATYTSVVKCLCSCGRIEDAEELL 142
G+C P V TYT+++ C G +E A ++L
Sbjct: 153 SSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKML 212
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
G M P+ TY+ D + A+ L+R+M CVPN+ TY LI A
Sbjct: 213 GVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG-CVPNVVTYTTLIHGLCA 271
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
+++D R + + + + D SY L+ G C + +EA Q F EM K LP ++T
Sbjct: 272 AHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRIT 331
Query: 263 FETLYRGLIQSDMLRTWRRL------KKKLDEESITFGSEFQNYH 301
+ L RG + L R L +D + +T+ Y
Sbjct: 332 YTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYS 376
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 130/284 (45%), Gaps = 17/284 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y+SL++G CK +D A M +G PNVVTY L++G+C + H
Sbjct: 221 VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLC---AAHK--- 274
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A + DEM D S++ +L Y R + + + M K P
Sbjct: 275 ----VDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRI 330
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEM-VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYT +V+ C+ R+E+A LL M G+ P TY+ Y K A + ++
Sbjct: 331 TYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQE 390
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M ++ PN TY+ LI R++ E+ +V D+ +YT++I GLC
Sbjct: 391 MIARNV-APNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKP----DVVTYTIVIEGLCGTD 445
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRTWRRL 282
+ +EA EM+ K + P TF ++ L + DM W+ L
Sbjct: 446 RTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLL 489
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 139/307 (45%), Gaps = 33/307 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT+LI G+CK ++ A + LG M R PNVVTY+ LL+G+C+ L
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD----- 241
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK---PQLSLDKLNFMKEKGICPT 118
A +F M +G P+V +++ ++H AHK +L +D++ CP
Sbjct: 242 -----QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT----CCPA 292
Query: 119 -VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+Y +++ C GRIE+A++L EM P TY C + + A L
Sbjct: 293 DTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLL 352
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
MK P++ TY+I++ + R E + + + +Y+ LI GLC+
Sbjct: 353 ENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCK 412
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
+ A +E+++ P VT+ + GL +D RT EE++T E
Sbjct: 413 AGRVNHA----MEVLKNVDKPDVVTYTIVIEGLCGTD--RT---------EEALTLLEEM 457
Query: 298 QNYHFKP 304
N +P
Sbjct: 458 VNKRVEP 464
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 130/293 (44%), Gaps = 23/293 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV YT+LI+G C +++D A + EM + V+YN LL+G CR
Sbjct: 256 VPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR------ 309
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK-EKGICPTV 119
I A+++F EM + PD +++ ++ + A + + + L MK GI P V
Sbjct: 310 ----IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 365
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY+ VV R +A E + EM+ V+P+A TY+ N AM++ +
Sbjct: 366 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKN 425
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ + P++ TY I+I +R + + + + + ++ +I LC
Sbjct: 426 VDK-----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLG 480
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL-------IQSDMLRTWRRLKKK 285
EA + V M GL P VT+ TL G I ++ RR KK
Sbjct: 481 DMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKK 533
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 52/297 (17%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR-VRGIEPDVTSFSIVLHV 93
V PN TYNV++NG+C+ + A +V EMR + + PD+ ++S V++
Sbjct: 5 VAPNERTYNVVVNGLCK----------ARLTSKAYEVLKEMRDGKSVAPDLVTYSTVING 54
Query: 94 YSRAHKPQLSLDKLNFMKEK-GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+ + + + + L M + G+ P V TYTSVV LC G+++ A E++ EM GV P
Sbjct: 55 FCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEP 114
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYR---------------------------------- 178
T++ + + + A+KLY+
Sbjct: 115 DKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELF 174
Query: 179 ---QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
+M+ED P++ TY LI F ++ ++ ++G + ++ +Y+ L+HGL
Sbjct: 175 QEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGL 234
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
C+ +A F M KG +P VT+ TL GL + + R L +DE + T
Sbjct: 235 CKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL---MDEMTAT 288
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+R V+P+ TYN + + A ++ ++M++ P++ TY+ +I F
Sbjct: 1 MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60
Query: 206 MDMVREIWNH-VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
MD EI V + D+ +YT ++ GLC K AC+ EM KG+ P K TF
Sbjct: 61 MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120
Query: 265 TLYRG 269
L G
Sbjct: 121 ALITG 125
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 52/191 (27%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT +I G C +R + A L EM+ + VEP+V T+N ++ +CR +
Sbjct: 429 PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMD----- 483
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-------- 113
A K+ M G+EP + +++ +L +SR + +++ + M+ K
Sbjct: 484 -----EAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAA 538
Query: 114 -------------GIC---------------------PTVATYTSVVKCLCSCGRIEDAE 139
G+C P ++V L GR E+A
Sbjct: 539 NLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAG 598
Query: 140 ELLGEMVRNGV 150
+L+ + + G+
Sbjct: 599 KLINSISKVGL 609
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 132/269 (49%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT++I+G+ K + A +M++ G+ PNVVT N +++G+C+ ++
Sbjct: 250 PNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMD----- 304
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE V +M I P+ T+++ ++H Y + + ++ L M G P V T
Sbjct: 305 -----KAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVT 359
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ CLC G +A E+ M+++G P+A TY Y + + M
Sbjct: 360 YSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMV 419
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + P H +NI I + R+D +N ++ D+ +YT +I GLC+ +
Sbjct: 420 QNGM-RPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRL 478
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+A F +MI+ GL P +TF TL G
Sbjct: 479 DDAMSRFCQMIDDGLSPDIITFNTLIHGF 507
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 140/298 (46%), Gaps = 28/298 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN Y SLI+G+ + A R L EM G PNVVTY++L++ +C+ + LH R
Sbjct: 319 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCK-SGLHAEAR 377
Query: 61 --FEKTIRNAEK------------------------VFDEMRVRGIEPDVTSFSIVLHVY 94
F I++ +K V D M G+ P F+I ++ Y
Sbjct: 378 EIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAY 437
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ + + N M+++G P + YT+V+ LC GR++DA +M+ +G+SP
Sbjct: 438 CKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDI 497
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
T+N + A +L+ +M + + PN++T+N +I ++ R++++
Sbjct: 498 ITFNTLIHGFALHGKWEKAEELFYEMMDRGI-PPNVNTFNSMIDKLFKEGKVTEARKLFD 556
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ + ++ SY +IHG + E + +M+ GL P VTF TL G++
Sbjct: 557 LMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVS 614
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 38/330 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + LI C +++ LG++I+ G+ VT+ LL +C
Sbjct: 142 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAE--------- 192
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG--ICPTV 119
++T V M G PDV S++ +L K + + + ++ M E G P V
Sbjct: 193 KRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNV 252
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+YT+V+ G + A L +M+ +G+ P+ T N + + A + +Q
Sbjct: 253 VSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQ 312
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M ++ + +PN TYN LI +++ + I + ++ +Y+MLI LC+
Sbjct: 313 MIDEHI-MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSG 371
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRG---------------LIQSDMLRTWRRLKK 284
EA + F MI+ G P T+ +L G L+ + +R R +
Sbjct: 372 LHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFN 431
Query: 285 ----------KLDEESITFGSEFQNYHFKP 304
+LDE S+TF ++ Q F P
Sbjct: 432 IEIYAYCKCGRLDEASLTF-NKMQQQGFMP 460
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 110/251 (43%), Gaps = 17/251 (6%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA-------HKPQLSLDKLNFMKEKG---IC 116
+A +FDE+ R + + + +L +RA P L++ N M G +
Sbjct: 82 DALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVA 141
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P +AT+ ++ C C G + LG++++ G+ A T+ + K + AM +
Sbjct: 142 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNI 201
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK--GSELGLDLDSYTMLIHG 234
+ + C P++ +Y L+ A + + E+ + + G ++ SYT +IHG
Sbjct: 202 VLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHG 261
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI--- 291
++ +A F +M++ G+ P VT ++ GL + + + +++ +E I
Sbjct: 262 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 321
Query: 292 --TFGSEFQNY 300
T+ S Y
Sbjct: 322 CTTYNSLIHGY 332
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 44/190 (23%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP++ YT++I G CKI R+D A +MI+ G+ P+++T+N L++G E
Sbjct: 459 MPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEE 518
Query: 61 F-------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E + A K+FD M G +P+V S++ ++H Y
Sbjct: 519 LFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYF 578
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTS-------------VVKC------LCSCGRIE 136
A + + L+ M G+ PT T+ + VV C C GRIE
Sbjct: 579 IAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIE 638
Query: 137 DAEELLGEMV 146
D L EM+
Sbjct: 639 DILTLFREML 648
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 138/274 (50%), Gaps = 11/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ + +L+ CK + A + MI+ ++P+VVTYN L++G C R+ +
Sbjct: 261 MPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEM----- 315
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
KT+ VFD M +G P V S++ +++ Y + ++ M ++G+ P
Sbjct: 316 -GKTV----NVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTV 370
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC GR+ DA L EMV G P TY F AM L + +
Sbjct: 371 TYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVI 430
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +L P+IH Y+I++ ++ R++++ + L D+ +YT++I+GLC++
Sbjct: 431 EGTNL-DPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGL 489
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA + F EM E G P T+ + RG ++++
Sbjct: 490 LAEASKLFGEMDENGCSPNACTYNLITRGFLRNN 523
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 11/266 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G CK+ A RFL M +R P VV Y+ +++ +C+
Sbjct: 157 PDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCK---------- 206
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A +F +M +GI P+ ++S ++H + ++ M + I P T
Sbjct: 207 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 266
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++V LC G + A ++ M+++ + P TYN + R + + ++ M
Sbjct: 267 FNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMV 326
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
CVP++ +Y LI + + MD ++ + L D +Y LIHGLC +
Sbjct: 327 RKG-CVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 385
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLY 267
++A F EM+ G +P VT+ L+
Sbjct: 386 RDAIALFHEMVVYGQIPDLVTYRILF 411
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 121/253 (47%), Gaps = 11/253 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT+LI G+CKI +D A EM ++G+ P+ VTYN L++G+C L
Sbjct: 331 VPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL----- 385
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
R+A +F EM V G PD+ ++ I+ + H+ ++ L ++ + P +
Sbjct: 386 -----RDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIH 440
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y+ V+ +C G +E A +L ++ G+ P TY + A KL+ +M
Sbjct: 441 IYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 500
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E+ C PN TYN++ F+ N +++ + +D+ + T+L+ L +
Sbjct: 501 DENG-CSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGL 559
Query: 241 WKEACQYFVEMIE 253
+ Q E ++
Sbjct: 560 DQSVKQILCEFVQ 572
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 134/287 (46%), Gaps = 11/287 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+SLI+G C + A R MI R + P+ +T+N L++ +C+
Sbjct: 227 PNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCK---------- 276
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A V D M ++PDV +++ ++ + + +++ + M KG P+V +
Sbjct: 277 EGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVIS 336
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C ++ A L EM + G+ P TYN A+ L+ +M
Sbjct: 337 YTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMV 396
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+P++ TY IL +R+ + ++G+ L D+ Y++++ G+C +
Sbjct: 397 VYGQ-IPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGEL 455
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ A F ++ KGL P T+ + GL Q +L +L ++DE
Sbjct: 456 EAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 502
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 46/303 (15%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI +C +NR+ A LG++++ G +P+ T+ L+ G+C E I A
Sbjct: 95 LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLC----------VEGKIGEAL 144
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
++FD+M G +PDV ++ +++ + ++ L M+++ PTV Y++++ L
Sbjct: 145 QLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSL 204
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C ++ +A L +M+ G+SP+ TY+ A++L+ M + +P+
Sbjct: 205 CKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKI-MPD 263
Query: 190 IHTYNILI------GMFM-------ALNRMDMVREIWN-------HVKGSELGLDLD--- 226
T+N L+ GM + + + D+ ++ H SE+G ++
Sbjct: 264 QLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFD 323
Query: 227 ------------SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
SYT LI+G C+ Q +A F EM ++GL+P VT+ TL GL
Sbjct: 324 TMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVG 383
Query: 275 MLR 277
LR
Sbjct: 384 RLR 386
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 11/260 (4%)
Query: 17 INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR 76
+N ID A M+ P++V ++ LL + R K ++ +M
Sbjct: 32 VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRM----------KHYSTVLSLYKQMD 81
Query: 77 VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
GI + + +I+++ + ++ + L + + G P+ AT+T++++ LC G+I
Sbjct: 82 SFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIG 141
Query: 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
+A +L +M G P TY + + A++ R M++ + C P + Y+ +
Sbjct: 142 EALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRN-CRPTVVVYSTI 200
Query: 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
I ++ +++ + + + +Y+ LIHGLC WKEA + F MI + +
Sbjct: 201 IDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKI 260
Query: 257 LPQKVTFETLYRGLIQSDML 276
+P ++TF TL L + M+
Sbjct: 261 MPDQLTFNTLVDALCKEGMV 280
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 136/288 (47%), Gaps = 24/288 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V YT+++ G CK R A + L EM ++G PN+ TYNV++ G+C
Sbjct: 77 LPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE--------- 127
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ + A+K+ +EM VRG PDV +++ + + + + F+ + P V
Sbjct: 128 -ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVD---EARKFLARMPVTPDVV 183
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+YT+V+ LC G ++ A +L +M G +P TY+ + + AM L M
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C PN+ YN L+G L + ++ ++ D+ SY I GLC+ ++
Sbjct: 244 LKLG-CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 302
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
K+A F M+E+G P ++ L L + KK+LD+
Sbjct: 303 VKKAKAVFDRMVERGCTPNASSYSMLVEELCK----------KKELDD 340
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 137/306 (44%), Gaps = 46/306 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G CK +D A R L +M RG P+VVTY+ L++G C+
Sbjct: 180 PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGE------- 232
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + D M G P++ +++ +L R + D L M+ +G P V +
Sbjct: 233 ---VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVS 289
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + + LC R++ A+ + MV G +P+A +Y+ +E +K+ + A+ L Q +
Sbjct: 290 YNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAR 349
Query: 182 E-----------------------------------DDLCVPNIHTYNILIGMFMALNRM 206
E + +C P++ YN+++ ++
Sbjct: 350 EKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQI 409
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D +I + ++ ++ +L+HGLC + +A + M+++G +P VT+ TL
Sbjct: 410 DKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTL 468
Query: 267 YRGLIQ 272
+ +
Sbjct: 469 VDAMCK 474
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 138/287 (48%), Gaps = 13/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y SL+ ++ I AE L EM RG P+VV+YN ++G+C+ ER
Sbjct: 250 PNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA------ER- 302
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A+ VFD M RG P+ +S+S+++ + + ++ + +EK +
Sbjct: 303 ---VKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILL 359
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGV-SPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT ++ LC GR ++A L +++ + P YN + R+ + A+++++QM
Sbjct: 360 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 419
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + C N+ T+NIL+ +R+ + + D +Y L+ +C+ K
Sbjct: 420 LERNCC--NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGK 477
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
A + F E ++ G +P VT+ L GL+ +M L KLD
Sbjct: 478 SAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLD 524
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 14/244 (5%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
MI++ +P+ T+ +LL G+CR L A ++ M+ G PD ++
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLE----------KARQLLGRMKEMGCVPDDAIYNA 50
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ YS+A + L M + PTV TYT++V LC GR +DA +LL EM G
Sbjct: 51 LISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKG 110
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
SP+ TYN + + + A K+ +M P++ TYN I +R+D
Sbjct: 111 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGY-FPDVVTYNSFIKGLCKCDRVDEA 169
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
R+ + + D+ SYT +I+GLC+ A + +M +G P VT+ +L G
Sbjct: 170 RKFLARMPVTP---DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDG 226
Query: 270 LIQS 273
+
Sbjct: 227 FCKG 230
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 129/311 (41%), Gaps = 42/311 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
P+V Y + I G CK R+ A+ M+ERG PN +Y++L+ +C++ L
Sbjct: 285 PDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITL 344
Query: 58 -------------------------NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
RF++ KV DE + EPDV ++++L
Sbjct: 345 VEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDE---KICEPDVFFYNVMLD 401
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+ + + +L M E+ C V T+ +V LC R+ DAE +L MV G P
Sbjct: 402 SHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIP 460
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
TY + A++L+ + + CVP++ TY+ LI + N + +
Sbjct: 461 DFVTYGTLVDAMCKCGKSAAALELFEEAVKGG-CVPDVVTYSALITGLVHENMAEEAYLL 519
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG-LI 271
+ LD+ + +I G E + FVE+IE + P TF G L+
Sbjct: 520 FTK-------LDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLV 572
Query: 272 QSDMLRTWRRL 282
+++ L R L
Sbjct: 573 KAESLGKARGL 583
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 3/178 (1%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M +K P T+ +++ LC ++E A +LLG M G P YN Y KD
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTY-NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
A K +M ++ C+P + TY NI+ G+ A D V+ + + ++ ++ +Y
Sbjct: 61 FGQAFKFLAEMVKNH-CLPTVVTYTNIVDGLCKAGRTKDAVK-LLDEMRDKGCSPNIYTY 118
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+++ GLCE++K EA + EM +G P VT+ + +GL + D + R+ ++
Sbjct: 119 NVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM 176
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 70/183 (38%), Gaps = 18/183 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +L+ CK + A E ++ G P+VVTY+ L+ G+ +H N
Sbjct: 459 IPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGL-----VHENMA 513
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + +F ++ DV ++ ++ Y+ L L + E + P
Sbjct: 514 EEAYL-----LFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNAR 561
Query: 121 TYTSVVKC-LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+ + L + A L V+ G P N + D A +++
Sbjct: 562 TFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYS 621
Query: 180 MKE 182
MK+
Sbjct: 622 MKQ 624
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 135/273 (49%), Gaps = 11/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT LI CK +D A L M +G+ PN+ TYN ++ G+ +
Sbjct: 373 PDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLK---------- 422
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A ++ + M G++P S+ + + Y ++ P ++D MK++GI P++A
Sbjct: 423 ARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAA 482
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ + L GRI +AE++ ++ + G+SP + TYN K Y + A +L +M
Sbjct: 483 CNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMI 542
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P++ N LI R+D +++ +K +L + +Y +L+ GL ++ K
Sbjct: 543 SKG-CEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKI 601
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+A + F M E G P +TF +L L ++D
Sbjct: 602 LKALELFGSMTESGCPPNTITFNSLLDCLSKND 634
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 145/322 (45%), Gaps = 31/322 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PN+ YT I + RID A EM + G P+V+TY VL++ +C
Sbjct: 268 PNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKEL 327
Query: 52 ----RASLHPNER---------FEKT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
RAS H +R F K + ++ ++EM V G PDV +++I++ +
Sbjct: 328 YVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCK 387
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D L+ M KGI P + TY +++ L R+++A ELL M GV P+A +
Sbjct: 388 SGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFS 447
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y F Y D A+ + MK+ + +P+I N + R+ +I+N +
Sbjct: 448 YVLFIDYYGKSGDPAKAIDTFETMKKRGI-MPSIAACNASLYTLAETGRISEAEDIFNDL 506
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
L D +Y ML+ + + +A Q EMI KG P + +L L ++ +
Sbjct: 507 HKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRV 566
Query: 277 -RTWR---RLKK-KLDEESITF 293
W+ RLK KL +T+
Sbjct: 567 DAAWKMFGRLKNLKLAPTVVTY 588
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P ++ Y L+ G N + A +M G PN TYN+LL+ +
Sbjct: 794 PTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGK---------- 843
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K I ++ EMR RG EP+ + +I++ +++ +LD + PT T
Sbjct: 844 SKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCT 903
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ L GR E A ++ EM+ G P++ YN + + + A +L+++M
Sbjct: 904 YGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMV 963
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + P++ +Y IL+ R+D + + +K + L D SY +I+GL + ++
Sbjct: 964 KEGI-RPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRL 1022
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
EA F EM +G+ P T+ L
Sbjct: 1023 DEALSLFSEMKNRGISPDLYTYNAL 1047
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 22/271 (8%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G+ P + +YN L++G L + EK A ++F++M+ G P+ +++++L
Sbjct: 791 GIHPTLESYNCLMDG------LLGSNFTEK----ALELFEDMKSAGTHPNNFTYNLLLDA 840
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ ++ + D + M+ +G P T+ ++ L + A +L E++ SP+
Sbjct: 841 HGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPT 900
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
TY + AMK++ +M D C PN YNILI F +D E++
Sbjct: 901 PCTYGPLIDGLLKAGRSEQAMKIFEEML-DYGCGPNSVIYNILINGFGKSGEIDFACELF 959
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + DL SYT+L+ LC + EA QYF E+ GL P V++ + GL +S
Sbjct: 960 KKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKS 1019
Query: 274 DMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
RRL +E+++ SE +N P
Sbjct: 1020 ------RRL-----DEALSLFSEMKNRGISP 1039
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 131/290 (45%), Gaps = 26/290 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PN Y L+ K RI+ EM RG EPN +T+N++++ + + +L+
Sbjct: 829 PNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDL 888
Query: 58 -----NERFEKT----------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ F T A K+F+EM G P+ ++I+++ + +
Sbjct: 889 YYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGK 948
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + + M ++GI P + +YT +V+CLC GRI++A + E+ G+ P +
Sbjct: 949 SGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVS 1008
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + A+ L+ +MK + P+++TYN LI ++D+ +++ +
Sbjct: 1009 YNFIINGLGKSRRLDEALSLFSEMKNRGIS-PDLYTYNALILHLGIAGKVDVAVKMYEEL 1067
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ L + +Y LI G +A F +M+ G P TF L
Sbjct: 1068 QLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 120/265 (45%), Gaps = 20/265 (7%)
Query: 3 NVKMYTSLIY----GWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
N Y LI+ G+C + A + MI G++P++ TY+ L+ + RR
Sbjct: 200 NAYSYNGLIHLLLPGFC-----NEALKVYKRMISEGMKPSMKTYSALMVALGRRGD---- 250
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
R + +EM+ G+ P++ +++I + RA + + M ++G P
Sbjct: 251 ------TRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPD 304
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V TYT ++ LC+ G+++ A+EL +M + SP TY ++ D + +
Sbjct: 305 VITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWN 364
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M+ D P++ TY ILI +D ++ + + + +L +Y +I GL +
Sbjct: 365 EMEVDGY-APDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKA 423
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTF 263
++ EA + M G+ P ++
Sbjct: 424 RRLDEALELLENMESLGVKPTAFSY 448
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 117/263 (44%), Gaps = 12/263 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP++ + +Y + RI AE ++ + G+ P+ VTYN+L+ +
Sbjct: 477 MPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQ------ 530
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A ++ EM +G EPDV + +++ +A + + +K + PTV
Sbjct: 531 ----IDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVV 586
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ L G+I A EL G M +G P+ T+N + A+K++ +M
Sbjct: 587 TYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRM 646
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P++ TYN +I + R+D ++ +K L D + LI G+ +
Sbjct: 647 TMMN-CNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGR 704
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
++A + +E + + L F
Sbjct: 705 VEDAIKVVMEFVHQACLQTNSQF 727
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 121/311 (38%), Gaps = 47/311 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y L+ G K +I A G M E G PN +T+N LL+ + + +
Sbjct: 583 PTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDA------- 635
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+F M + PDV +++ +++ R + + + MK K + P T
Sbjct: 636 ---VDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVT 691
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS-----AETYNCFFKEYR----------- 165
+++ + GR+EDA +++ E V + E C E
Sbjct: 692 LCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEIL 751
Query: 166 --------------------GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
RK A A ++ + ++ P + +YN L+ + N
Sbjct: 752 VCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNF 811
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ E++ +K + + +Y +L+ + ++ + + EM +G P +T
Sbjct: 812 TEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNI 871
Query: 266 LYRGLIQSDML 276
+ L++S+ L
Sbjct: 872 IISALVKSNNL 882
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 107 LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRG 166
+ M++K I + TY ++ K L G I A L +M G +A +YN
Sbjct: 154 FDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLL- 212
Query: 167 RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN---HVKGSELGL 223
N A+K+Y++M + + P++ TY+ L+ +AL R R+I N +K L
Sbjct: 213 PGFCNEALKVYKRMISEGM-KPSMKTYSALM---VALGRRGDTRKIMNLLEEMKSIGLRP 268
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
++ +YT+ I L ++ +A F EM ++G P +T+ L L + L + L
Sbjct: 269 NIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELY 328
Query: 284 KKLDEES 290
K+ S
Sbjct: 329 VKMRASS 335
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 14/283 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+++I G+ ++D EM++RG+ P+VVTY +++G+C+ + F
Sbjct: 201 PNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKA------QLF 254
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ AE VF +M G++P++ +++ ++H Y K + + L M G P T
Sbjct: 255 DR----AEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCT 310
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR +A M+ G+ PS TY Y + + L M
Sbjct: 311 YGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMV 370
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN H +NI + +D +I+N ++ L D SY LI LC+ +
Sbjct: 371 ANGIS-PNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRV 429
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
+A F +MI +G+ P V F +L GL D W ++++
Sbjct: 430 DDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVD---KWEKVEE 469
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 144/286 (50%), Gaps = 11/286 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G CK D AE +MI+ GV+PN+ TYN L++G ++
Sbjct: 236 PDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIG------KW 289
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ +R + +EM G +P+ ++ +L+ + + + + + M KGI P+V T
Sbjct: 290 KEVVR----MLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTT 345
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ + G + + +LL MV NG+SP+ +N FF Y + AM ++ +M+
Sbjct: 346 YGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMR 405
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L P+ +Y LI L R+D +N + + D+ ++ L++GLC KW
Sbjct: 406 QQGLS-PDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKW 464
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
++ + F EM+ G+ P V F T+ L + + +RL ++
Sbjct: 465 EKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIE 510
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 143/317 (45%), Gaps = 28/317 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +++SL+YG C +++ + E EM+ G+ PN+V +N +L +C+ + +R
Sbjct: 446 PDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRL 505
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
TI A K+ + M G++PD S++ +LH Y +
Sbjct: 506 VDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCK 565
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + M GI P V TY +++ L R +A+EL M+ +G T
Sbjct: 566 AGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYT 625
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + A+K+++ + L + NI T+NI+IG + R + +++ +
Sbjct: 626 YNIILNGLCKSNCVDEAIKMFQNLCSKGLQL-NIITFNIMIGALLKGGRKEDAMDLFAAI 684
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI-QSDM 275
+ L ++ +Y +++ L E+ +E F M + G P L R L+ + D+
Sbjct: 685 PANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 744
Query: 276 LRTWRRLKKKLDEESIT 292
R L KLDE + +
Sbjct: 745 SRAGAYL-SKLDERNFS 760
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 14/292 (4%)
Query: 10 LIYGWCKINRIDMA-ERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
L+ G C R+ A + L M E G P+ V+YN+LL G+C +R E+ +
Sbjct: 135 LLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNE------KRAEEALELL 188
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
+ D+ +V P+V S+S V++ + + + M ++GI P V TYT+V+
Sbjct: 189 HMMADD-QVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDG 247
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC + AE + +M+ NGV P+ +TYNC Y +++ +M P
Sbjct: 248 LCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGG-PKP 306
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
N TY L+ R R ++ + G + + +Y +++HG K E
Sbjct: 307 NCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLL 366
Query: 249 VEMIEKGLLPQKVTFETLYR-----GLIQSDMLRTWRRLKKKLDEESITFGS 295
M+ G+ P F + G+I M + ++ L +++++G+
Sbjct: 367 NLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGA 418
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 135/309 (43%), Gaps = 39/309 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +L++G+CK RID A +M+ G+ P VVTYN +L+G+ + +
Sbjct: 551 PDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKEL 610
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ A K+F + +G++ ++ +F+I++ +
Sbjct: 611 YLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLK 670
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + ++D + G+ V TY VV+ L G +E+ + L M +NG +P+++
Sbjct: 671 GGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQM 730
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
N + R D + A ++ E + V T ++LI +F + E +H
Sbjct: 731 LNALVRRLLHRGDISRAGAYLSKLDERNFSV-EASTTSMLISIFSS-------DEYQHHA 782
Query: 217 KGSELG---LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
K L+ + + LI + ++ +A F EM+ KGL P VT+ T+ GL Q+
Sbjct: 783 KSLPKKYRILNEANSSALIK---KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQT 839
Query: 274 DMLRTWRRL 282
+ L
Sbjct: 840 GRFSEAKEL 848
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 135/309 (43%), Gaps = 13/309 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+ LI +C++ ++ G +++ G + + N LLNG+C +R
Sbjct: 92 PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLC------DGKRV 145
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI--CP-T 118
+ + + + M G PD S++I+L + + +L+ L+ M + + CP
Sbjct: 146 GEAM---DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPN 202
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V +Y++V+ + G+++ L EM+ G+ P TY + + A +++
Sbjct: 203 VVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQ 262
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
QM D+ PNI TYN LI ++++ + V + + + +Y L++ LC+
Sbjct: 263 QMI-DNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKN 321
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
+ +EA +F MI KG+ P T+ + G L L + I+
Sbjct: 322 GRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIF 381
Query: 299 NYHFKPYRR 307
N F Y +
Sbjct: 382 NIFFSAYAK 390
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 121/275 (44%), Gaps = 14/275 (5%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG--- 79
A + E++ +VV +N LL V R + +T+ + +F+ M VR
Sbjct: 33 ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVS---LFNRM-VRDCYI 88
Query: 80 -IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
+ P+ ++SI++ + R + + + G ++ LC R+ +A
Sbjct: 89 KVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEA 148
Query: 139 EE-LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL--CVPNIHTYNI 195
+ LL M G P +YN K K A A++L M +D + C PN+ +Y+
Sbjct: 149 MDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYST 208
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
+I F ++D ++ + + D+ +YT +I GLC+ Q + A F +MI+ G
Sbjct: 209 VINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNG 268
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ P T+ L G + + W+ + + L+E S
Sbjct: 269 VKPNIDTYNCLIHGYLS---IGKWKEVVRMLEEMS 300
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++++G + R A+ MI + N+ TYN++LNG+C+
Sbjct: 824 PDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCK---------- 873
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+F + +G++ ++ +F+I++ + + + ++D + G+ P V T
Sbjct: 874 SNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVT 933
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V + L G +E+ + L M ++G + N + R D + A ++
Sbjct: 934 YRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLD 993
Query: 182 EDDLCVPNIHTYNILIGMF 200
E + + T + LI +F
Sbjct: 994 EKNFSL-EASTTSELISLF 1011
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 138/353 (39%), Gaps = 60/353 (16%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR---------- 52
++ Y ++ G CK N +D A + + +G++ N++T+N+++ + +
Sbjct: 622 DIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLF 681
Query: 53 ASLHPNERF---------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIV----LHV 93
A++ N E ++ + +F M G P+ + + LH
Sbjct: 682 AAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHR 741
Query: 94 --YSRAHKPQLSLDKLNFMKEKGICPTV-------------------------ATYTSVV 126
SRA LD+ NF E + A ++++
Sbjct: 742 GDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALI 801
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
K RI+DA L EM+ G++P TYN + A +LY M
Sbjct: 802 K---KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQ 858
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+ NI+TYNI++ N +D +++ + L L++ ++ ++I L + + ++A
Sbjct: 859 M-NIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMD 917
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
F + GL+P VT+ + LI+ L + L +++ S N
Sbjct: 918 LFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLN 970
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 125/293 (42%), Gaps = 20/293 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +M +L+ I A +L ++ ER T ++L+ S+ ++ +
Sbjct: 726 PNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLI-------SIFSSDEY 778
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ ++ K + I + S +++ +A + + M KG+ P V T
Sbjct: 779 QHHAKSLPKKYR------ILNEANSSALI----KKARRIDDAYSLFREMLMKGLTPDVVT 828
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ L GR +A+EL M+ + + TYN + A K+++ +
Sbjct: 829 YNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLC 888
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L + NI T+NI+IG + R + +++ + + L D+ +Y ++ L E+
Sbjct: 889 SKGLQL-NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSL 947
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRTWRRLKKKLDEESITF 293
+E F+ M + G L R L+Q D+ R L KLDE++ +
Sbjct: 948 EEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYL-SKLDEKNFSL 999
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 152/313 (48%), Gaps = 22/313 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ +TSL+YGWC+ ++ A+ L +M E G EP++V +N LL+ +
Sbjct: 243 PSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKM------ 296
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A + EM +G EP+ S++I++ + K ++ M+ G V T
Sbjct: 297 ----TDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVT 352
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G+I ++L M + G P+ TY + +++ ++L M+
Sbjct: 353 YTALISGFCKWGKINRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMR 412
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
CVP++ YN++I + L + +IWN ++ S+ +LD++ ++IHG +
Sbjct: 413 MVG-CVPDLSIYNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCL 471
Query: 242 KEACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML----RTWRRLKKK-----LDEES 290
EAC+YF EMI +GLL PQ + L L++ + L W + K D +
Sbjct: 472 VEACEYFKEMIGRGLLTTPQYGILKELLNALLRGEKLGMAKDVWSCIVTKGCELNADAWT 531
Query: 291 ITFGSEFQNYHFK 303
I S F N H K
Sbjct: 532 IWIHSLFSNGHVK 544
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 11/270 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT +I +C ++D A R EM G E +VVTY L++G C+
Sbjct: 313 PNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFCKWGK------- 365
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I ++ D M+ +G P+ ++ +L + + + + L+ + M+ G P ++
Sbjct: 366 ---INRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVPDLSI 422
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
Y V++ C G ++ ++ EM + SP +T+ + G+ A + +++M
Sbjct: 423 YNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEACEYFKEMI 482
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L P L+ + ++ M +++W+ + L+ D++T+ IH L
Sbjct: 483 GRGLLTTPQYGILKELLNALLRGEKLGMAKDVWSCIVTKGCELNADAWTIWIHSLFSNGH 542
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
KEAC Y ++M+E ++P+ TF L RGL
Sbjct: 543 VKEACSYCLDMMEADIMPKPETFAKLMRGL 572
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 12/213 (5%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
+++ LI + ++ A L EM + G EP+ + LL+ +C+ S
Sbjct: 177 ELFIVLIRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGS---------- 226
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
++ A +F++MRVR P + F+ +L+ + R K + L M+E G P + + +
Sbjct: 227 VKQAASLFEDMRVR-FSPSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNN 285
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ G++ DA +LL EMVR G P+A +Y + + ++ + AM+++ +M E
Sbjct: 286 LLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEM-ERT 344
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
C ++ TY LI F +++ +I + +K
Sbjct: 345 GCEADVVTYTALISGFCKWGKINRGYQILDAMK 377
>gi|242038267|ref|XP_002466528.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
gi|241920382|gb|EER93526.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
Length = 595
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 135/276 (48%), Gaps = 13/276 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+++ YT+L+YGWC+ ++D A+ L M V +VV +N LL G + RFE
Sbjct: 188 SLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVVAFNTLLAGFV------ADGRFE 241
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A ++ +M RG P+ S++ ++ + ++ M+ KG P TY
Sbjct: 242 ----DAFELTGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTY 297
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++V C G+I E L + R+G+ A Y+ FF + ++ ++L +M+E
Sbjct: 298 GTLVSTFCKAGKISQGYEFLDAISRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRE 357
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P++ YN++I + L +WN ++ L +D++ ++++GL +
Sbjct: 358 CR-CPPDLKIYNVVIRLACRLGETKQAMSLWNEMETGGLSPGVDTFAIMVNGLVGQGLLV 416
Query: 243 EACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
EAC YF +M+ +GL PQ + L L++ + L
Sbjct: 417 EACSYFKDMVGRGLFVAPQYGVLKDLLNALVRDEKL 452
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Query: 88 SIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147
S++ V R +P+L L+ + + A + S+++ L G + AE+L+ E +
Sbjct: 124 SLLCPVLRRLPQPRLLPFALSLLSARPDHDQPALFLSLLESLSKAGHVVTAEQLV-EEPQ 182
Query: 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
S Y + + + A + +MK D+ + ++ +N L+ F+A R +
Sbjct: 183 TRFPLSLRHYTALLYGWCRQGKLDEAKHVLARMKAADVAL-DVVAFNTLLAGFVADGRFE 241
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
E+ ++ + SYT LI GL + + EA + FVEM KG P VT+ TL
Sbjct: 242 DAFELTGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTL 300
>gi|414872586|tpg|DAA51143.1| TPA: empty pericarp4 [Zea mays]
Length = 595
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 13/276 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+++ YT+L+YGWC+ ++D A+ L M V +VV +N LL G RFE
Sbjct: 188 SLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVVVFNTLLAGFVAEG------RFE 241
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A ++ +M RG P+ S++ ++ + ++ M+ KG P TY
Sbjct: 242 ----DAFELAGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTY 297
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++V C G+I E L M R+G+ A Y+ FF + ++ ++L +M+E
Sbjct: 298 GTLVNTFCKAGKISQGYEFLDAMSRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRE 357
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P++ YN++I + L +WN ++ + L +D++ +++ GL +
Sbjct: 358 CR-CPPDLKIYNVVIRLACRLGETKQAMTLWNEMESAGLSPVVDTFAIVVSGLVGQGLLI 416
Query: 243 EACQYFVEMIEKGL--LPQKVTFETLYRGLIQSDML 276
EAC YF +M+ +GL +PQ + L L++ + L
Sbjct: 417 EACSYFKDMVGRGLFVVPQYGVLKDLLNALVRDEKL 452
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 122/272 (44%), Gaps = 15/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+LI G R+D A R EM +G P+ VTY L+N C+ + F
Sbjct: 257 PNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLVNTFCKAGKISQGYEF 316
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
D M G+ D + + + + + L+ + M+E P +
Sbjct: 317 ----------LDAMSRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPPDLKI 366
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V++ C G + A L EM G+SP +T+ G+ A ++ M
Sbjct: 367 YNVVIRLACRLGETKQAMTLWNEMESAGLSPVVDTFAIVVSGLVGQGLLIEACSYFKDMV 426
Query: 182 EDDLCVPNIHTYNILIGMFMALNR---MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
L V + Y +L + AL R +++ +++W + L++ ++T+ IH L K
Sbjct: 427 GRGLFV--VPQYGVLKDLLNALVRDEKLELAKDVWKCIVSKGCELNVSAWTIWIHALFAK 484
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ KEAC Y ++M+E GL+PQ TF L +GL
Sbjct: 485 KHVKEACLYCLDMLEAGLMPQPDTFAKLMKGL 516
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 2/179 (1%)
Query: 88 SIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147
S++ V R +P+L L+ + + A + S+++ L G + AE+L+ E+ +
Sbjct: 124 SLLCPVLRRLPQPRLLPFALSLLSARPDHDQPALFLSLLESLSKAGHVLTAEQLVEEL-Q 182
Query: 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
+ S Y + + + A + +MK D+ + ++ +N L+ F+A R +
Sbjct: 183 PRLPLSLRHYTALLYGWCRQGKLDEAKHVLARMKAADVAL-DVVVFNTLLAGFVAEGRFE 241
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
E+ ++ + SYT LI GL + + EA + FVEM KG P VT+ TL
Sbjct: 242 DAFELAGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTL 300
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 140/283 (49%), Gaps = 11/283 (3%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
+LI +I +++A R E+ GV NV T N+++N +C+ + F
Sbjct: 195 ALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTF------- 247
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
E++ +G+ PD+ +++ ++ YS + + + ++ M KG P V TY +V+
Sbjct: 248 ---LSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVING 304
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC G+ E A+E+ EM+R+G+SP + TY E + DA ++ M+ D+ VP
Sbjct: 305 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDV-VP 363
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
++ ++ ++ +F +D +N VK + L D YT+LI G C K EA
Sbjct: 364 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLR 423
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM+++G VT+ T+ GL + ML +L ++ E +
Sbjct: 424 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGL 466
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 139/313 (44%), Gaps = 30/313 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P++ Y +LI + ++ A + M +G P V TYN ++NG+C+
Sbjct: 258 PDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEV 317
Query: 52 -----RASLHPNERFEKTIR----------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R+ L P+ +++ E +F +MR R + PD+ FS ++ +++R
Sbjct: 318 FAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTR 377
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +L N +KE G+ P YT +++ C G I +A L EM++ G + T
Sbjct: 378 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVT 437
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN RK A KL+ +M E L P+ +T ILI L + E++ +
Sbjct: 438 YNTILHGLCKRKMLGEADKLFNEMTERGL-FPDSYTLTILIDGHCKLGNLQNAMELFKKM 496
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ---- 272
K + LD+ +Y L+ G + A + + +M+ K +LP ++F L L
Sbjct: 497 KEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHL 556
Query: 273 SDMLRTWRRLKKK 285
S+ R W + K
Sbjct: 557 SEAFRVWDEMISK 569
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 155/335 (46%), Gaps = 50/335 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT LI G+C+ I A EM+++G +VVTYN +L+G+C+R
Sbjct: 397 IPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKR-------- 448
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIV-------------LHVYSRAHKPQLSLDKL 107
K + A+K+F+EM RG+ PD + +I+ + ++ + + ++ LD +
Sbjct: 449 --KMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVV 506
Query: 108 NF----------------------MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
+ M K I PT +++ +V LCS G + +A + EM
Sbjct: 507 TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEM 566
Query: 146 VRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
+ + P+ N K Y R ++G + L + + E VP+ +YN LI F+
Sbjct: 567 ISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEG--FVPDCISYNTLIYGFVKEE 624
Query: 205 RMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
M + ++ + GL D+ +Y ++HG C + + KEA +MIE+G+ P + T
Sbjct: 625 NMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRST 684
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
+ +L G + D L R ++ + + +F
Sbjct: 685 YTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDKF 719
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 136/307 (44%), Gaps = 46/307 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y ++I G CK + + A+ EM+ G+ P+ TY LL C++
Sbjct: 293 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD------- 345
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +F +MR R + PD+ FS ++ +++R+ +L N +KE G+ P
Sbjct: 346 ---AVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 402
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK------------- 168
YT +++ C G I +A L EM++ G + TYN RK
Sbjct: 403 YTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 462
Query: 169 ----------------------DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+ AM+L+++MKE + + ++ TYN L+ F + +
Sbjct: 463 ERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKL-DVVTYNTLLDGFGKVGDI 521
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D +EIW + E+ S+++L++ LC K EA + + EMI K + P + ++
Sbjct: 522 DTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSM 581
Query: 267 YRGLIQS 273
+G +S
Sbjct: 582 IKGYCRS 588
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F +++ + +A K + + + ++ KG ++ +++ L G +E A + E+
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
R+GV + T N +++E + P+I TYN LI + + M
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGV-YPDIVTYNTLISAYSSQGLM 276
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ E+ + + + +Y +I+GLC+ K++ A + F EM+ GL P T+ +L
Sbjct: 277 EEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 336
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 1/204 (0%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ +R A + F +R +G + + + ++ R +L+ + G+ V T
Sbjct: 169 RKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTL 228
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+V LC G++E L E+ GV P TYN Y + A +L M
Sbjct: 229 NIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPS 288
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P ++TYN +I + + +E++ + S L D +Y L+ C+K
Sbjct: 289 KGFS-PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAV 347
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
E F +M + ++P V F ++
Sbjct: 348 ETENIFSDMRSRDVVPDLVCFSSM 371
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 24/169 (14%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVR-NGVS------PSAETY-NC---------- 159
T + ++++ L GR+ DA+ + M+R +GVS TY NC
Sbjct: 102 TSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLL 161
Query: 160 --FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
F + R ++A A L R +I N LIG + + +++ I+ +
Sbjct: 162 IRTFVQARKLREAYEAFTLLRSKGY----TVSIDACNALIGSLVRIGWVELAWRIYQEIS 217
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
S +G+++ + ++++ LC+ K ++ + E+ EKG+ P VT+ TL
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTL 266
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 147/300 (49%), Gaps = 16/300 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y SLIYG K+ R A L EM G P+V+TY+ L+ G+ +
Sbjct: 146 VPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDG------- 198
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+T++ A K+F EM+ RG +PD +F+ ++ +A + +L+ L+ MKE+G+ P V
Sbjct: 199 --ETVK-AFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVV 255
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ G + +A LL EM RNG P TY+C + A ++ ++M
Sbjct: 256 TYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKM 315
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + C P+ TYN LI ++ +++ +K D+ +Y+ LI L + +
Sbjct: 316 -EKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAAR 374
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
+ AC F EM G+ P T+ ++ L ++ + RL K L + IT+ +
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 139/294 (47%), Gaps = 11/294 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+L+ K R+D A L EM ERGV+P VVTYN L+ G + L
Sbjct: 217 PDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLV----- 271
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + DEM+ G +PDV ++S ++ +A + + L M+++G P T
Sbjct: 272 -----EAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTIT 326
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ L G + DA L M G +P TY+ A L+ +M+
Sbjct: 327 YNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEME 386
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P++ TY +I + ++D +++ ++G L D+ +Y ++ L ++
Sbjct: 387 SVGI-QPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRF 445
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
KEA + F +M E GLLP T++ L GL ++ + L K+L E+ F S
Sbjct: 446 KEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDS 499
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 141/288 (48%), Gaps = 15/288 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +L+ K + D A R L EM + G P+V TYN L++ + + L +E F
Sbjct: 77 PNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRL--SEAF 134
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+F EMR RG PD +++ +++ + + Q +++ L M+ G P V T
Sbjct: 135 --------TLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ L G A +L EM R G P + T+ + A++L +MK
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + P + TYN LI F + + + + +K + D+ +Y+ LI GL + +
Sbjct: 247 ERGV-KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML----RTWRRLKKK 285
EACQ +M ++G P +T+ TL GL ++ +L R + R+K K
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSK 353
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 11/258 (4%)
Query: 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PNVVTYN LLN + + A+ +F+E++ PDV S+S +++ R
Sbjct: 7 PNVVTYNSLLNALAKAGQCE----------EAQLLFEELKAAKWTPDVVSYSCLINSLGR 56
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A K + +L+ + M+ KG P + TY ++V CL G+ ++A LL EM NG P T
Sbjct: 57 AGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRT 116
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YNC + A L+ +M+E CVP+ TYN LI + R E+ +
Sbjct: 117 YNCLISTLGKAGRLSEAFTLFAEMRERG-CVPDTFTYNSLIYGLGKVGRSQKAMELLEEM 175
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ D+ +Y+ LI GL + + +A + F EM +G P +TF L L ++ +
Sbjct: 176 ERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRV 235
Query: 277 RTWRRLKKKLDEESITFG 294
L ++ E + G
Sbjct: 236 DDALELLDEMKERGVKPG 253
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 26/294 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN--- 58
P+ Y +LI G K ++ A R M +G P+VVTY+ L+ + + A +
Sbjct: 322 PDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVL 381
Query: 59 -ERFEKT---------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E E + +A+++F EMR +G+ PDV +++ L+ R
Sbjct: 382 FEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGR 441
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + MKE G+ P VATY +++ L ++DA LL E++ G + +
Sbjct: 442 GGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLK 501
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
++ + + + A +L + L P +YN LI R+ +
Sbjct: 502 FDECLEILTSWGNVDEAHELLQFANSKGLW-PGASSYNALIDALAKAGRVSEAFNTLEDL 560
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
K D+ SY+ LI L + + A + EM ++GL ++ L R L
Sbjct: 561 KEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +L+ G K +D A L E+IE+G C SL +E
Sbjct: 461 LPDVATYDALLLGLSKTKEVDDACGLLKELIEQG---------------CAFDSLKFDEC 505
Query: 61 FE-----KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
E + A ++ +G+ P +S++ ++ ++A + + + L +KE+G
Sbjct: 506 LEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGG 565
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
P + +Y+S++ L G+I+ A ELL EM + G+ S +Y+
Sbjct: 566 KPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYS 608
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 136/270 (50%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN + +LI G CK +++ AE L EM +GV+ NVV +N +++G C+R + R
Sbjct: 319 VPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFR 378
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ D M +G E DV +++I+ + H+ + + LN M EKG+ P V
Sbjct: 379 LQ----------DIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVV 428
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T + ++ C G + + E L + + GV P+ TYN Y + A L +M
Sbjct: 429 TCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEM 488
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E L +P++ TY LI ++++D +++N + + ++ +YT +I GL ++ +
Sbjct: 489 VEKGL-LPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGR 547
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA + + EM+ GL+P FE L L
Sbjct: 548 ADEALKLYDEMMRMGLIPDDRVFEALVGSL 577
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 139/317 (43%), Gaps = 34/317 (10%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR----------- 52
V+ T ++ C+ + A+ + EM RGV P V TYN LLN R
Sbjct: 182 VQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILG 241
Query: 53 --------ASL----------HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
ASL +ER I AEKV++EM R +E DV ++ ++
Sbjct: 242 LMEREGVVASLVTYTILIEWYASSER----IGEAEKVYEEMCERNVEMDVYVYTSMISWN 297
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
RA + + + M +GI P T+ +++ +C G++E AE LL EM GV +
Sbjct: 298 CRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNV 357
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
+N Y R + A +L M+ ++ TYNIL L+R + + + N
Sbjct: 358 VIFNTMMDGYCKRGMMDEAFRLQDIMERKGF-EADVFTYNILASGLCKLHRYEEAKRVLN 416
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ + ++ + I C++ E ++ + ++G++P VT+ TL +++
Sbjct: 417 VMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNE 476
Query: 275 MLRTWRRLKKKLDEESI 291
++ LK ++ E+ +
Sbjct: 477 KVKQAHXLKAEMVEKGL 493
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
++ V S +IV+ V R + + + +N M +G+ PTV TY +++ E +
Sbjct: 178 VDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVD 237
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
E+LG M R GV S TY + Y + A K+Y +M E ++ + +++ Y +I
Sbjct: 238 EILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEM-DVYVYTSMISW 296
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ +++ + + + ++ LI G+C+ + + A EM KG+
Sbjct: 297 NCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLN 356
Query: 260 KVTFETLYRGLIQSDMLRTWRRLK 283
V F T+ G + M+ RL+
Sbjct: 357 VVIFNTMMDGYCKRGMMDEAFRLQ 380
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 147/317 (46%), Gaps = 27/317 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PN+ Y+S+I G CK + A L EM++ G +PNV T+ L++G+C++
Sbjct: 899 PNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRL 958
Query: 54 --------SLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ PN E+ + AE +F+ M+ +G+ P+ +++ ++ +
Sbjct: 959 FLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHC 1018
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A + + + M +G P TY S+V LC GR E+A +LL +N +
Sbjct: 1019 KAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGV 1078
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY E R D N A+ +M + P+IH Y LI F N M ++++
Sbjct: 1079 TYTILISEQCKRADMNQALVFLNKMFKVGF-QPDIHLYTTLIAAFCRQNMMKDSEKLFDE 1137
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
V L ++YT +I G C ++K A ++F +M + G P +++ L GL +
Sbjct: 1138 VIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESR 1197
Query: 276 LRTWRRLKKKLDEESIT 292
L R+L + ++ ++
Sbjct: 1198 LDEARQLYDTMIDKGLS 1214
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 126/290 (43%), Gaps = 50/290 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YT+LI G CK A + M G PN TYN +++G+C+R R
Sbjct: 1004 VPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRG------R 1057
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ + F IE D +++I++ + +L LN M + G P +
Sbjct: 1058 AEEAFKLLNTGFQNQ----IEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIH 1113
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT+++ C ++D+E+L E+++ G++P+ ETY Y K + A+K +++M
Sbjct: 1114 LYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKM 1173
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D C P+ +Y LI GLC++ +
Sbjct: 1174 S-DHGCAPDSISYGALIS-----------------------------------GLCKESR 1197
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT----WRRLKKKL 286
EA Q + MI+KGL P +VT TL +++ + RL KKL
Sbjct: 1198 LDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKL 1247
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 10/251 (3%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
++ A EM RGV P+ TY ++ G CR + + A++ EM RG
Sbjct: 812 VEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGN----------VLEADRWICEMMERG 861
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
D + ++++ + ++ + + + G+ P + Y+S++ LC G ++ A
Sbjct: 862 FVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAF 921
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
ELL EMV+NG P+ T+ + A +L+ ++ D PN+HTY +I
Sbjct: 922 ELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISG 981
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ ++ ++ +K L + ++YT LI G C+ + +A + M +G P
Sbjct: 982 YCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPN 1041
Query: 260 KVTFETLYRGL 270
T+ ++ GL
Sbjct: 1042 TCTYNSIVDGL 1052
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PN Y S++ G CK R + A + L + +E + VTY +L++ C+RA ++
Sbjct: 1040 PNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVF 1099
Query: 58 -NERF--------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
N+ F + ++++EK+FDE+ G+ P +++ ++ Y R
Sbjct: 1100 LNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCR 1159
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K L++ M + G P +Y +++ LC R+++A +L M+ G+SP T
Sbjct: 1160 EKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVT 1219
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
EY +D AM + ++ + L + +HT
Sbjct: 1220 RVTLTYEYCKTEDFASAMVILERLNK-KLWIRTVHT 1254
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
V++ K + ++D + M+ +G+ T ++ +E A + EM GV P
Sbjct: 770 VFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYP 829
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
+ TY Y + A + +M E V N T ++I F + ++ R +
Sbjct: 830 DSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNA-TLTLIITAFCEKSLVN--RAV 886
Query: 213 WNHVKGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
W K +++GL +L +Y+ +I GLC++ K+A + EM++ G P T +L GL
Sbjct: 887 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 946
Query: 271 IQSDMLRTWRRLKKKL 286
+ RL KL
Sbjct: 947 CKKGWTERAFRLFLKL 962
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 145/293 (49%), Gaps = 11/293 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V ++ L+ G+CK R+ A+ L M+++G++P+VVTY L++G C
Sbjct: 264 PDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYC----------L 313
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A+ +F+ M G+ +V S++I+++ + + K +++ M K I P V T
Sbjct: 314 VKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVT 373
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC G+I A +L+ EM GV TYN + A+ L +MK
Sbjct: 374 YNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 433
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + P+++TY ILI R+ + I+ + + + +YT++I G C+ +
Sbjct: 434 DEGI-QPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLF 492
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
+A +M + G +P T+E + L + D +L +++ + FG
Sbjct: 493 DKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLLFG 545
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 144/285 (50%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV MY ++I CK+ ++ A EM+ +G+ P+VVTY+ L++G C L+
Sbjct: 194 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLN----- 248
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A +F++M I PDV +FSI++ + + + + + + L M ++GI P V T
Sbjct: 249 -----DAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVT 303
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C ++ A+ + M + GV+ + ++YN + K + AM L+++M
Sbjct: 304 YCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMH 363
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ +P++ TYN LI ++ ++ + + + D +Y ++ LC+ +
Sbjct: 364 CKNI-IPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQV 422
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A +M ++G+ P T+ L GL + L+ + + + L
Sbjct: 423 DKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDL 467
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 140/285 (49%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CK+ + A + L + + V+PNVV YN +++ +C+ K +
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKV----------KLVN 213
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++ EM +GI PDV ++S ++ + K ++ N M + I P V T++ +V
Sbjct: 214 EAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILV 273
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C GR+++A+ +L M++ G+ P TY Y K N A ++ M + +
Sbjct: 274 DGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGV- 332
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
N+ +YNI+I F + ++D ++ + + D+ +Y LI GLC+ K A +
Sbjct: 333 TANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALK 392
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM ++G+ K+T+ ++ L ++ + L K+ +E I
Sbjct: 393 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 437
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 137/320 (42%), Gaps = 46/320 (14%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ LI + ++ + ++++G EPN +T L+ G+C + +H F
Sbjct: 94 FNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFH---- 149
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
D++ G + + +++ + + +L L + K + P V Y +++
Sbjct: 150 ------DKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTII 203
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+C + +A +L EMV G+SP TY+ + N A+ L+ +M +++
Sbjct: 204 DSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEIN 263
Query: 187 VPNIHTYNILIGMFMALNRM-----------------DMV------------------RE 211
P+++T++IL+ F R+ D+V +
Sbjct: 264 -PDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKS 322
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
I+N + + ++ SY ++I+G C+ +K EA F EM K ++P VT+ +L GL
Sbjct: 323 IFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLC 382
Query: 272 QSDMLRTWRRLKKKLDEESI 291
+S + +L ++ + +
Sbjct: 383 KSGKISYALKLVDEMHDRGV 402
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y SLI G CK +I A + + EM +RGV + +TYN +L+ +C+ N +
Sbjct: 368 IPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCK------NHQ 421
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K I K+ DE GI+PD+ +++I++ + + + + + + KG TV
Sbjct: 422 VDKAIALLTKMKDE----GIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVY 477
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT +++ C + A LL +M NG P+A+TY + + + A KL R+M
Sbjct: 478 TYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREM 537
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 36/239 (15%)
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+ A + EM GI D+ +F+I+++ +S+ S + +KG P T T++
Sbjct: 73 QTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTL 132
Query: 126 VKCLCSCGRIEDAEELLGEMVRNG-----------------------------------V 150
+K LC G+I A ++V G V
Sbjct: 133 IKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLV 192
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
P+ YN K N A LY +M + P++ TY+ LI F L +++
Sbjct: 193 QPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGIS-PDVVTYSALISGFCILGKLNDAI 251
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++N + E+ D+ ++++L+ G C++ + KEA M+++G+ P VT+ +L G
Sbjct: 252 GLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDG 310
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 83/162 (51%), Gaps = 10/162 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y S++ CK +++D A L +M + G++P++ TY +L++G+C+ L +
Sbjct: 409 YNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRL----------K 458
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A+ +F+++ V+G V ++++++ + +L L+ M++ G P TY ++
Sbjct: 459 DAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIII 518
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168
L + AE+LL EM+ G+ + C F + R+
Sbjct: 519 LSLFEKDENDMAEKLLREMIARGLLFGWKKAYCLFTRFFQRR 560
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 81/210 (38%), Gaps = 1/210 (0%)
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
P + F +L + + Q ++ M+ GI + T+ ++ C G + +
Sbjct: 54 PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
+++ G P+A T K + + A+ + ++ + + Y LI
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKV-CYGTLINGLC 172
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
+ + ++ V G + ++ Y +I +C+ + EA + EM+ KG+ P V
Sbjct: 173 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 232
Query: 262 TFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
T+ L G L L K+ E I
Sbjct: 233 TYSALISGFCILGKLNDAIGLFNKMISEEI 262
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 141/263 (53%), Gaps = 12/263 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ YT+L+ WC + A R EM+E+G++P+VV +N ++ G+ R +R
Sbjct: 331 PDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLR------GQRR 384
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + K+F+ M+ +G P+V ++++++ + + K ++++ M+E P VAT
Sbjct: 385 PEAL----KMFELMKAKGPPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQPDVAT 440
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + R++ +L EM + G P A TYN K RK + A ++Y++M
Sbjct: 441 YTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMI 500
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L P IHTYN+++ F+ M +W + + D++SYT+ I+G +
Sbjct: 501 KKGL-EPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTVFINGHIRHGR 559
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
+EA +Y EMI KG+ ++ +
Sbjct: 560 PEEAYKYIEEMINKGMTAPQIDY 582
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 12/245 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M + G + V ++N LL + E R A +VFD+M + PD+ S++
Sbjct: 290 MKKNGFDDGVESFNCLLVALAN----------EGLGREARQVFDKMHGQ-YSPDLRSYTA 338
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ + A + N M EKG+ P V + ++++ L R +A ++ M G
Sbjct: 339 LMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKG 398
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P+ TY +++ R + AM+ + +M+E C P++ TY L+ + RMD V
Sbjct: 399 PPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEAR-CQPDVATYTCLLVGYGNAKRMDRV 457
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + D +Y LI L ++ +A + + +MI+KGL P T+ + +
Sbjct: 458 TAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKS 517
Query: 270 LIQSD 274
D
Sbjct: 518 YFLGD 522
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT L+ G+ R+D L EM ++G P+ TYN L+ + R
Sbjct: 436 PDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNR--------- 486
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP-QLSLDKLNFMKEKGICPTVA 120
K +A +++ +M +G+EP + ++++++ Y + + M +GICP V
Sbjct: 487 -KMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPDVN 545
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR--GRKD 169
+YT + GR E+A + + EM+ G++ YN F ++ G+ D
Sbjct: 546 SYTVFINGHIRHGRPEEAYKYIEEMINKGMTAPQIDYNKFAADFSKAGKPD 596
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 108/235 (45%), Gaps = 14/235 (5%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR---AHKPQLSLDKLNFMKEKGICPTVAT 121
I+NA VF+ M+ G + V SF+ +L + + + DK++ P + +
Sbjct: 280 IKNAVGVFELMKKNGFDDGVESFNCLLVALANEGLGREARQVFDKMHGQYS----PDLRS 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQM 180
YT+++ C+ + +A + EM+ G+ P +N + RG++ A+K++ M
Sbjct: 336 YTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRRPE-ALKMFELM 394
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K PN+ TY +LI +MDM E + ++ + D+ +YT L+ G ++
Sbjct: 395 KAKGP-PPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKR 453
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL----IQSDMLRTWRRLKKKLDEESI 291
EM +KG P T+ L + L + D R ++++ KK E +I
Sbjct: 454 MDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLEPTI 508
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 91/227 (40%), Gaps = 4/227 (1%)
Query: 43 NVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVT-SFSIVLHVYSRAHKPQ 101
+ L +C L RF+ R + + F G T ++ +LH+ + + +
Sbjct: 188 SALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLHILGKTRQFE 247
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
+ + + M + G ++ + +K + G I++A + M +NG E++NC
Sbjct: 248 MMVAIIQEMGKVGAL-SMDAFKVAIKSFAAAGEIKNAVGVFELMKKNGFDDGVESFNCLL 306
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
A +++ +M P++ +Y L+ + + +WN + +
Sbjct: 307 VALANEGLGREARQVFDKMHGQ--YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGM 364
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
D+ + +I GL Q+ EA + F M KG P T+ L R
Sbjct: 365 KPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTMLIR 411
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 129/281 (45%), Gaps = 46/281 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+L+ G CK +D+A L EM E+G++PNV TYN L+NG+C+ +
Sbjct: 460 PNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGN------- 512
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A K+ +EM + G PD +++ ++ Y + + + + L M +KG+ PT+ T
Sbjct: 513 ---IEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVT 569
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C G +ED E L+ M+ G+
Sbjct: 570 FNVLMNGFCMSGMLEDGERLIKWMLDKGI------------------------------- 598
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+PN T+N L+ + N M EI+ + + D ++Y +LI G C+ +
Sbjct: 599 -----MPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNM 653
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
KEA EM+EKG ++ +L +G + R+L
Sbjct: 654 KEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKL 694
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 143/293 (48%), Gaps = 15/293 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YT+LI G+ K + + + EM + + P+ VTY +++G+C+
Sbjct: 355 PDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGK------- 407
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+F EM +G++PD +++ ++ Y +A + + + N M EKG+ P V T
Sbjct: 408 ---VVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVT 464
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++V LC CG ++ A ELL EM G+ P+ TYN + A+KL M+
Sbjct: 465 YTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKL---ME 521
Query: 182 EDDLC--VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
E DL P+ TY ++ + + M E+ + L + ++ +L++G C
Sbjct: 522 EMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSG 581
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
++ + M++KG++P TF +L + + +R + K + + +
Sbjct: 582 MLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVV 634
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 154/330 (46%), Gaps = 31/330 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+ ++ G+C++ ++ + + E+ +G++PN TYN +++ +C+ + E+
Sbjct: 284 VPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQ 343
Query: 61 FEKTIRNAE-------------------------KVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ ++N K+FDEM+ + I PD +++ ++H
Sbjct: 344 VLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLC 403
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A K + + M KG+ P TYT+++ C G +++A L +MV G++P+
Sbjct: 404 QAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVV 463
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY + + A +L +M E L PN+ TYN LI + ++ ++
Sbjct: 464 TYTALVDGLCKCGEVDIANELLHEMSEKGL-QPNVCTYNALINGLCKVGNIEQAVKLMEE 522
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ + D +YT ++ C+ + +A + M++KGL P VTF L G S M
Sbjct: 523 MDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGM 582
Query: 276 LRTWRRLKKKLDEESI-----TFGSEFQNY 300
L RL K + ++ I TF S + Y
Sbjct: 583 LEDGERLIKWMLDKGIMPNATTFNSLMKQY 612
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 26/289 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC------------ 50
N Y +++ C++ ++ A L +M RG P+VV+Y+V+++G C
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLM 310
Query: 51 ---RRASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+R L PN+ +I + AE+V M+ + I PD ++ ++ + ++
Sbjct: 311 EELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKS 370
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ + MK K I P TYTS++ LC G++ +A +L EM+ G+ P TY
Sbjct: 371 GNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
Y + A L+ QM E L PN+ TY L+ +D+ E+ + +
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGL-TPNVVTYTALVDGLCKCGEVDIANELLHEMS 489
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
L ++ +Y LI+GLC+ ++A + EM G P +T+ T+
Sbjct: 490 EKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTI 538
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 11/272 (4%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
I A R E E GV N V+YN++L+ +C+ ++ A + +M RG
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGK----------VKEAHSLLIQMEFRG 282
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
PDV S+S+++ Y + + L + ++ KG+ P TY S++ LC GR+ +AE
Sbjct: 283 NVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAE 342
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
++L M + P Y + + + KL+ +MK + VP+ TY +I
Sbjct: 343 QVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKI-VPDFVTYTSMIHG 401
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
++ R++++ + L D +YT LI G C+ + KEA +M+EKGL P
Sbjct: 402 LCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPN 461
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
VT+ L GL + + L ++ E+ +
Sbjct: 462 VVTYTALVDGLCKCGEVDIANELLHEMSEKGL 493
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+++ +CK+ + A L M+++G++P +VT+NVL+NG C L ER
Sbjct: 530 PDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERL 589
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + + +GI P+ T+F+ ++ Y + + +++ M +G+ P T
Sbjct: 590 IKWMLD----------KGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNT 639
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++K C +++A L EMV G S +A +YN K + RK A KL+ +M+
Sbjct: 640 YNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMR 699
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 59/160 (36%), Gaps = 45/160 (28%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN + SL+ +C N + M +GV P+ TYN+L+ G C+
Sbjct: 599 MPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKA-------- 650
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
RN ++ + HK M EKG T A
Sbjct: 651 -----RNMKEAW-----------------------FLHKE---------MVEKGFSLTAA 673
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
+Y S++K + E+A +L EM +G E Y+ F
Sbjct: 674 SYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIF 713
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 127/257 (49%), Gaps = 10/257 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +I G CK+ + A + + I +G P+V T+N L++G C++ + E TI+
Sbjct: 429 YNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQL------KMETTIQ 482
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ ++M G+ PDV +++ VL+ S+A K + ++ M EKG P TY +
Sbjct: 483 ----ILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILT 538
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ LC G++ +A +L+ E++ G++P ++ + D GA +L+R+M E
Sbjct: 539 ESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKV 598
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
TYNI+I F + M +++ + D +Y ++I G C +
Sbjct: 599 SHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYK 658
Query: 247 YFVEMIEKGLLPQKVTF 263
+ +EMIEKG +P TF
Sbjct: 659 FLLEMIEKGFIPSLTTF 675
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 143/297 (48%), Gaps = 23/297 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G CK + + AE++L +++ G+EP+ TYN L++G C+ L
Sbjct: 284 PDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGML------ 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+NAEK+ +G PD ++ +++ + + +L N KG+ PTV
Sbjct: 338 ----QNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVIL 393
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK---EYRGRKDANGAMKLYR 178
Y ++K LC G I A +++ EM NG S TYN + DAN M
Sbjct: 394 YNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLM---- 449
Query: 179 QMKEDDLC---VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
D + VP++ T+N LI + +M+ +I N + + D+ +Y +++GL
Sbjct: 450 ---NDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGL 506
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ K ++ + F M+EKG +P K+T+ L L ++ + L ++ + IT
Sbjct: 507 SKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGIT 563
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 11/292 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +T I +C+ R A R L M+ +G + N V Y ++ G N R
Sbjct: 143 VPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGF-----YEENYR 197
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E A ++F++M GI PDV++F+ +LH + + Q S LN + +KG+C +
Sbjct: 198 VE-----AYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLF 252
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++ LC G + A +L ++R G++P TYN + A K ++
Sbjct: 253 TFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL 312
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L P+ TYN LI + + + +I D +Y LI+GLC+ +
Sbjct: 313 VNGGL-EPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDE 371
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A F + KGL P + + L +GL Q ++ ++ ++ E +
Sbjct: 372 IDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCS 423
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 127/264 (48%), Gaps = 16/264 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + +LI G+CK +++ + L +M GV P+V+TYN +LNG+ + NE
Sbjct: 458 VPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVK---NED 514
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+T F+ M +G P+ +++I+ +A K +LD ++ + KGI P
Sbjct: 515 LMET-------FETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTV 567
Query: 121 TYTSVVKCLCSCGRIEDAEEL---LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
++ +++ + G ++ A +L +GE + VS + TYN + + D + KL+
Sbjct: 568 SFATIISGFANNGDLKGAYQLFRRMGEQYK--VSHTTATYNIMINAFAEKLDLHMGEKLF 625
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+M C P+ +TY ++I F D + + L ++ +I+ LC
Sbjct: 626 LEMGAGG-CAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCV 684
Query: 238 KQKWKEACQYFVEMIEKGLLPQKV 261
+ + EA M+ G++P+ V
Sbjct: 685 QHRVHEAVDIIHFMVHNGIVPEVV 708
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 111/247 (44%), Gaps = 11/247 (4%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
EP+V++YN ++N + + A KVF M+ GI PDV +F+I + +
Sbjct: 108 EPSVLSYNAIMNILVESGYF----------KQAHKVFLRMKNVGIVPDVYTFTIRIKSFC 157
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
R +P +L LN M +G Y +VV +A EL +M+R G+ P
Sbjct: 158 RTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVS 217
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
T+N + + + +L ++ + +C N+ T+NI I + + +
Sbjct: 218 TFNKLLHTLCKKGEVQESERLLNKVLKKGMC-SNLFTFNIFIQGLCRKGMLSGAMSMLDS 276
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
V L D+ +Y LI GLC+ EA +Y +++ GL P T+ TL G + M
Sbjct: 277 VIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGM 336
Query: 276 LRTWRRL 282
L+ ++
Sbjct: 337 LQNAEKI 343
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 1/199 (0%)
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Y R K Q ++D M P+V +Y +++ L G + A ++ M G+ P
Sbjct: 86 YGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPD 145
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
T+ K + K + A++L M C N Y ++ F N E++
Sbjct: 146 VYTFTIRIKSFCRTKRPHSALRLLNNMVSQG-CQLNAVAYCTVVAGFYEENYRVEAYELF 204
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
N + + D+ ++ L+H LC+K + +E+ + ++++KG+ TF +GL +
Sbjct: 205 NDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRK 264
Query: 274 DMLRTWRRLKKKLDEESIT 292
ML + + E +T
Sbjct: 265 GMLSGAMSMLDSVIREGLT 283
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +I + + + M E+ EM G P+ TY V+++G C + +F
Sbjct: 605 YNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKF----- 659
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
EM +G P +T+F V++ H+ ++D ++FM GI P V S
Sbjct: 660 -----LLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVNSIS 712
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 137/276 (49%), Gaps = 20/276 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +T+LI G C NR+ A + GEM+E V PN VTYNVL+ G C+ +
Sbjct: 493 PNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGN------- 545
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIV---LHVYSRAHKPQLSLDKLNFMKEK----- 113
T+R A ++ DEM +G+ PD ++ + L R + + ++ L ++K
Sbjct: 546 --TVR-AFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIE 602
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGA 173
G P V TYT+++ LC G ++ AE L EM+ + P+ TY CF + A
Sbjct: 603 GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKA 662
Query: 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
++L+ + E L N TYNILI F L R+ E+ ++ S + D SY+ +I+
Sbjct: 663 IQLHDVLLEGFL--ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIY 720
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
C + KEA + + M+ +G+ P V + L G
Sbjct: 721 EYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYG 756
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 138/323 (42%), Gaps = 46/323 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG--------------------------- 34
+V Y +L+ G CK+ + E + EMIE G
Sbjct: 283 ADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDL 342
Query: 35 --------VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTS 86
V P++ YN L+N +C+ L AE +F+ M +G+ P+ +
Sbjct: 343 VNKVKKFGVAPSLFVYNALINSMCKDGKLD----------EAESLFNNMGHKGLFPNDVT 392
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
+SI++ + + K ++L L M E GI TV Y+S++ C G++ A+ L EM+
Sbjct: 393 YSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMI 452
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
NG+ P+ Y Y + + A +LY +M + PN +T+ LI NRM
Sbjct: 453 ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGIS-PNTYTFTALISGLCHANRM 511
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+++ + + + +Y +LI G C++ A + EM+EKGL+P T+ L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571
Query: 267 YRGLIQSDMLRTWRRLKKKLDEE 289
GL + + R L E
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGE 594
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT+++ C++ A +G M G + +V TYNV + G+C+ N+R
Sbjct: 213 PDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCK------NQR- 265
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++ + + +G+ DV ++ ++ + + + + +N M E G P+ A
Sbjct: 266 ---VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAA 322
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++V L G I A +L+ ++ + GV+PS YN + A L+ M
Sbjct: 323 VSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMG 382
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L PN TY+ILI F ++D+ + + + Y+ LI G C+ K
Sbjct: 383 HKGL-FPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ A F EMI GL P V + +L G + L RL ++ + I+
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGIS 492
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 122/282 (43%), Gaps = 11/282 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P ++ + ++ G +I + MA E++ G+ P+V Y ++ +C
Sbjct: 177 LPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCEL-------- 228
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K A +V M G + V ++++ + + + +++ N + KG+ V
Sbjct: 229 --KDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVG 286
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V LC E EE++ EM+ G PS + R + + A L ++
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV 346
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K+ + P++ YN LI ++D ++N++ L + +Y++LI C++ K
Sbjct: 347 KKFGV-APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
A + +M E G+ + +L G + LR + L
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 22/257 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEM---------IERGVEPNVVTYNVLLNGVCR 51
+P+ Y LI G C R+ A F+ ++ IE G PNVVTY L+NG+C+
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIE-GCLPNVVTYTALINGLCK 620
Query: 52 RASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK 111
+ AE + EM P+ +++ L + + ++ + +
Sbjct: 621 IG----------LMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL 670
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
E G TY +++ C GRI++A E+L M+ +G+SP +Y+ EY R D
Sbjct: 671 E-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLK 729
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A+KL+ M + P+ YN LI + E+ + + + + +Y L
Sbjct: 730 EAIKLWESMLNRGV-NPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSL 788
Query: 232 IHGLCEKQKWKEACQYF 248
IHG C YF
Sbjct: 789 IHGTCLMSSVSSTADYF 805
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 95/247 (38%), Gaps = 34/247 (13%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI P + + S VL+ R + +++L + + G+ P V YT+VV+ LC A
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL-----YRQMKED---------D 184
E++G M +G S TYN F + + A+++ Y+ ++ D
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLG 294
Query: 185 LC--------------------VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
LC VP+ + L+ + ++ N VK +
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
L Y LI+ +C+ K EA F M KGL P VT+ L + L
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414
Query: 285 KLDEESI 291
K+ E I
Sbjct: 415 KMTEVGI 421
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 136/264 (51%), Gaps = 11/264 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ +LI+G C+ + A + + M+ +G+E + +TYN+++ G C+ + + E
Sbjct: 466 NLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCK------DSKME 519
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ I K+ +M RG +PD+ +F+ +LH Y K + + L+ MK +G+ P + +Y
Sbjct: 520 EAI----KLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSY 575
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C I A+E L E++ G+ P+ YN Y D +GA+ MK
Sbjct: 576 GTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKS 635
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ + N+ TY L+ ++ + I++ + + + L + YT++I G C+ K
Sbjct: 636 NGIQPTNV-TYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMV 694
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
EA YF EM +G+ P K+T+ TL
Sbjct: 695 EAVAYFEEMRSRGISPNKLTYTTL 718
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 136/337 (40%), Gaps = 64/337 (18%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT++I CK ++D L E+ G++P VVTYNVL++ +C+ R E+ R
Sbjct: 224 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSG------RVEEAFR 277
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ M G+ P V +F I+++ +R + L M++ G+ P Y ++
Sbjct: 278 ----LKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 333
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G A L EMV + P+A TYN K G M+ ++ ED L
Sbjct: 334 GWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKAL----CKEGEMERAERILEDMLS 389
Query: 187 VP-NIH--TYNILIGMFMALNRM---------DMV---------------RE-------- 211
+ +H +N ++ + R +MV RE
Sbjct: 390 IGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQ 449
Query: 212 ----IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
IW LG++L + LIHGLCE + KEA + M+ KG+ +T+ +
Sbjct: 450 EAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMI 509
Query: 268 RGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
RG + + EE+I + FKP
Sbjct: 510 RGCCKDSKM-----------EEAIKLHGDMTRRGFKP 535
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 127/295 (43%), Gaps = 29/295 (9%)
Query: 2 PNVKMYTSLIYGW-CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
PN +Y LI GW C+ A R EM+ + ++P VTYN++ +C+ + ER
Sbjct: 324 PNEVIYNELI-GWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAER 382
Query: 61 F--------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
+ + + + +EM RG+ P+ + +
Sbjct: 383 ILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMREL 442
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ K Q ++ KG+ +AT +++ LC +++A +++ M+ G+ +
Sbjct: 443 CKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDS 502
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TYN + A+KL+ M P++ T+N L+ + L +M+ + +
Sbjct: 503 ITYNIMIRGCCKDSKMEEAIKLHGDMTRRGF-KPDLFTFNTLLHAYCNLGKMEETFHLLD 561
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+K L D+ SY +I G C+ + ++A +Y E++++GL P + L G
Sbjct: 562 QMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGG 616
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 15/247 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++I G CK I A+ +L E+++RG++PNV YN L+ G R
Sbjct: 570 PDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGD------- 622
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + M+ GI+P ++ +++ A + + + +E + V
Sbjct: 623 ---ISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIG 679
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ C G++ +A EM G+SP+ TY Y ++ A KL+ +M
Sbjct: 680 YTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMV 739
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEKQ 239
+ +P+ TY LI +N +D ++I + + S L D Y +L +G+
Sbjct: 740 GSGV-IPDNITYGTLIARCSEVNSLD--KDIGHTAELSSGALTKDDRMYNILSNGINAPW 796
Query: 240 KWKEACQ 246
KEA
Sbjct: 797 CQKEAAS 803
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 12/241 (4%)
Query: 33 RGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR-VRGIEPDVTSFSIVL 91
RG P++ T N L + R L A +VFDEMR R + + S++ ++
Sbjct: 179 RGAPPSIKTCNAFLEALVRAGQLDA----------AREVFDEMRESRNVALNEYSYTAMI 228
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+A K + L + G+ PTV TY ++ LC GR+E+A L G M + G++
Sbjct: 229 KALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMT 288
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
PS T+ R + G + + Q E PN YN LIG
Sbjct: 289 PSVVTFGILINGL-ARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALR 347
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+++ + ++ +Y ++ LC++ + + A + +M+ G+ F T+ L+
Sbjct: 348 LFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLL 407
Query: 272 Q 272
Q
Sbjct: 408 Q 408
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 139/279 (49%), Gaps = 20/279 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +L GWC++ A L +M+E G+ P TYN++L G R L
Sbjct: 207 PDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKATYNIILKGFFRSGQL------ 260
Query: 62 EKTIRNAEKVFDEMRVRG-----IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
++A F +M+ RG +PDV S++ VLH A + + + M +G
Sbjct: 261 ----QHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCK 316
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P+ ATY ++++ C G +EDA + +MVR G P+ TY + AMKL
Sbjct: 317 PSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKL 376
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV-KGSELGLDLDSYTMLIHGL 235
+MK + C PN+ TYN+LI + ++ +++ + KG E + D+Y ++I +
Sbjct: 377 LDRMKSEG-CEPNVQTYNVLIRYSLEEGEIEKGLDLFETMSKGEECLPNQDTYNIIISAM 435
Query: 236 CEKQKWKE---ACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+++ ++ A + VEM+++G LP+K F + GL+
Sbjct: 436 FVRKRAEDMAVAARMVVEMVDRGYLPRKFMFNRVLNGLM 474
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 108/239 (45%), Gaps = 9/239 (3%)
Query: 59 ERFEKTIRNAE---KVFDEM-RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG 114
ERF + R + ++F + R GI D+ F+ +L ++ + + + ++++
Sbjct: 146 ERFAMSHRRPDLAIRLFLSLHRSHGIAQDLPLFNSLLDALVKSRRASKAASLVRALEQR- 204
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
P TY ++ C A ++L +MV +G++P+ TYN K + A
Sbjct: 205 FPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAW 264
Query: 175 KLYRQMKE----DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
+ QMK D+ C P++ +Y ++ ++D R++++ + +Y
Sbjct: 265 DFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNA 324
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
LI C+K ++A F +M+ KG +P VT+ L RGL + + +L ++ E
Sbjct: 325 LIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSE 383
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV YT LI G C ++ A + L M G EPNV TYNVL+ R SL E
Sbjct: 351 IPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLI-----RYSLEEGE- 404
Query: 61 FEKTIRNAEKVFDEMRVRGIE--PDVTSFSIVLH---VYSRAHKPQLSLDKLNFMKEKGI 115
I +F+ M +G E P+ +++I++ V RA ++ + M ++G
Sbjct: 405 ----IEKGLDLFETMS-KGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGY 459
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELL 142
P + V+ L G E + ELL
Sbjct: 460 LPRKFMFNRVLNGLMLTGNQELSRELL 486
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 136/287 (47%), Gaps = 11/287 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++K YT L+ GW + M + EMI+ G+ P+VV Y +L++ C+
Sbjct: 267 VPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCD---- 322
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVF EM G P + ++++ + +L K+ G V
Sbjct: 323 ------EAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVP 376
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +VV C + E A +++ EM + P++ TY+ + A ++++M
Sbjct: 377 TCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRM 436
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D C P ++TY +++GMF + R+DM +W + + + ++ LI+GLC + +
Sbjct: 437 GMDG-CEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERGVLPCMHMFSALINGLCFENR 495
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+EAC YF EM++KG+ P F L L++ + + + KLD
Sbjct: 496 LEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRISLAQEMASKLD 542
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%)
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ +V+ ++++A E +M G+ YN K A +Y++M
Sbjct: 201 TFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEM 260
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K VP++ TY +L+ + + MV+ ++ + + + D+ +Y MLI C+ K
Sbjct: 261 KRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGK 320
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA + F EM G +P + L GL
Sbjct: 321 CDEAIKVFYEMEASGCMPSPHVYCMLINGL 350
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 147/290 (50%), Gaps = 10/290 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V YT+LI + + + +++ L M + V P+++TYN ++N C R L+ +E
Sbjct: 176 SVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINS-CARGGLN----WE 230
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ +F EMR GI+PD+ +++ +L+ + + M E G+ P + TY
Sbjct: 231 GLL----SLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTY 286
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++V+ ++E ELL EM +G P +YN + Y + D AM ++RQM+E
Sbjct: 287 RNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQE 346
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
CVPN TY++L+ ++ R D VRE++ +K S D+ +Y +LI E +K
Sbjct: 347 AR-CVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFK 405
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
E F +M+E+ + P T+E L + + +++ +DE+ I
Sbjct: 406 EVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIV 455
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 26/291 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---- 56
+P++ Y +L+ + K+N+++ L EM G P++ +YNVLL + +
Sbjct: 280 VPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMG 339
Query: 57 -----------PNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
PN + N ++F EM+V EPDV ++++++ V+
Sbjct: 340 VFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFG 399
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + M E+ + P + TY ++ G EDA+++L M G+ PS +
Sbjct: 400 EGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTK 459
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
Y + Y A+ ++ M E P + TYN LI MF I
Sbjct: 460 AYTGVIEAYGQAASYEEALVMFNTMNEMG-SKPTVETYNSLINMFARGGLYKESEAIMWK 518
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ S + D DS+ +I G + +++EA + +VE+ + P + TFE +
Sbjct: 519 MGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAV 569
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 14/233 (6%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+PN Y ++++ + R E + + ++F+EM G+ V S++ +++ Y
Sbjct: 139 KPNEHIYTIIISLLGR----------EGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYG 188
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI--EDAEELLGEMVRNGVSPS 153
R + ++SL+ L MK++ + P++ TY +V+ C+ G + E L EM G+ P
Sbjct: 189 RHGQYEVSLELLERMKKEKVTPSILTYNTVINS-CARGGLNWEGLLSLFAEMRHEGIQPD 247
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
TYN R + A ++R M E + VP+I TY L+ F LN+++ V E+
Sbjct: 248 IITYNTLLNACANRGLGDEAEMVFRTMNEGGM-VPDITTYRNLVETFGKLNKLEKVSELL 306
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ S D+ SY +L+ K + A F +M E +P VT+ L
Sbjct: 307 KEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSML 359
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 130/301 (43%), Gaps = 16/301 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI + + +M+E VEPN+ TY L+ C + LH
Sbjct: 386 PDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIY-ACGKGGLH----- 439
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A+K+ M +GI P +++ V+ Y +A + +L N M E G PTV T
Sbjct: 440 ----EDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVET 495
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ G +++E ++ +M +GV+ +++N + YR A+K Y ++
Sbjct: 496 YNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVEL- 554
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E P+ T+ ++ ++ +D E + ++ S + + Y M+I +W
Sbjct: 555 EKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRW 614
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK---KKLDEESITFGSEFQ 298
+A + EM+ + + +G D W+ ++ KL+ E G F
Sbjct: 615 DDAYEVLDEMVTNKVSNIHQVVGKMMKG--DYDDYSNWQMVEYVFDKLNSEGCGLGMRFY 672
Query: 299 N 299
N
Sbjct: 673 N 673
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 7/173 (4%)
Query: 95 SRAHKPQLSLDKLNFMKEKG-ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+RA +L L + + EKG V T + + L G I E+ + S
Sbjct: 52 ARAKTKELVLGNPSVVVEKGKYSYDVETLINKLSSLPPRGSIARCLEIFKNKL------S 105
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
+ FKE+ R D +++L++ M+ C PN H Y I+I + ++ EI+
Sbjct: 106 LNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIF 165
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + + SYT LI+ +++ + + M ++ + P +T+ T+
Sbjct: 166 EEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTV 218
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 144/273 (52%), Gaps = 11/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +L+ G CK +R+ AE+ L EM ERGV P++ T+ L++G CR+ +
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGN------ 417
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
FE NA ++FD + + + PDV +++ ++ R + + + M + I P
Sbjct: 418 FE----NALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHI 473
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+ ++ C G++EDA L EMV+ G P+ TYN K Y + + ++M
Sbjct: 474 TYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKM 533
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++D++ P++ T+N LI ++ M ++N ++ + D +Y M+I+G E+
Sbjct: 534 RQDNV-FPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGN 592
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++A + F M + G+ P + T+ +L G + +
Sbjct: 593 MQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTA 625
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 151/304 (49%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ + LI G+C++ + A +F EM R V P+VV+++ L+ RR +
Sbjct: 260 PDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMD----- 314
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A EM+ G+ PD +++V+ + RA +L + M G P V T
Sbjct: 315 -----HAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVT 369
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC R+ DAE+LL EM GV+P T+ Y + + A++L+ +
Sbjct: 370 YNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLL 429
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P++ TYN LI + E+W+ + E+ + +Y++LI CEK +
Sbjct: 430 RQRL-RPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQV 488
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES-----ITFGSE 296
++A + EM++KG LP T+ ++ +G +S ++ ++ +K+ +++ ITF +
Sbjct: 489 EDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTL 548
Query: 297 FQNY 300
Y
Sbjct: 549 IHGY 552
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 11/257 (4%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E N T N++++ C+ A+ V EM R + PDV + ++++
Sbjct: 154 EVNAYTLNIMVHSYCKTLEFD----------GADTVISEMEKRCVFPDVVTHNVLIDARF 203
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
RA ++ ++ M +G+ P + TY SV+K LC R + A+E+ M + V+P
Sbjct: 204 RAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVR 263
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
++N + + A+K Y++M+ P++ +++ LIG+F MD
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQH-RYVTPDVVSFSCLIGLFSRRGEMDHAGAYLRE 322
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+KG L D YTM+I G C EA + EM+ G LP VT+ TL GL +
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHR 382
Query: 276 LRTWRRLKKKLDEESIT 292
L +L +++E +T
Sbjct: 383 LLDAEKLLNEMEERGVT 399
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 132/274 (48%), Gaps = 13/274 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V ++ LI + + +D A +L EM G+ P+ V Y +++ G CR S+
Sbjct: 295 PDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMS----- 349
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +V DEM G PDV +++ +L+ + H+ + LN M+E+G+ P + T
Sbjct: 350 -----EALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCT 404
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ C G E+A +L ++R + P TYN + D A +L+ M
Sbjct: 405 FTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMH 464
Query: 182 EDDLCVPNIHTYNILIGMFMALNRM-DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ +PN TY+ILI ++ D + VK L ++ +Y +I G C
Sbjct: 465 AREI-LPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLP-NIRTYNSIIKGYCRSGN 522
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
K+ Q+ +M + + P +TF TL G I+ +
Sbjct: 523 VKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEE 556
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 136/291 (46%), Gaps = 16/291 (5%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
+++ +CK D A+ + EM +R V P+VVT+NVL++ R + A
Sbjct: 163 MVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGD----------VDAAI 212
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+ D M RG++P + +++ VL + + + + M + + P V ++ ++
Sbjct: 213 ALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGF 272
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C G +++A + EM V+P +++C + R + + A R+MK L VP+
Sbjct: 273 CRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGL-VPD 331
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
Y ++IG F M + + + G D+ +Y L++GLC++ + +A +
Sbjct: 332 GVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLN 391
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGS 295
EM E+G+ P TF TL G + + L+++L + +T+ S
Sbjct: 392 EMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNS 442
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 1/183 (0%)
Query: 84 VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLG 143
++ + +L V SRA P L+ + + T +V C + A+ ++
Sbjct: 122 ASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVIS 181
Query: 144 EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL 203
EM + V P T+N D + A+ L M L P I TYN ++
Sbjct: 182 EMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGL-KPGIVTYNSVLKGLCKH 240
Query: 204 NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
R D +E++ + + D+ S+ +LI G C + KEA +++ EM + + P V+F
Sbjct: 241 RRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSF 300
Query: 264 ETL 266
L
Sbjct: 301 SCL 303
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 137/270 (50%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ NV Y +LI G CK ++ AE + EM RG++ N + YN L++G C+R
Sbjct: 68 VANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG------- 120
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A KV M +G E D+ + + + + ++P+ + L M EKG+ P V
Sbjct: 121 ---LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVV 177
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+YT+++ C G +A++L EM + G P+A TYN + + A +L +M
Sbjct: 178 SYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEM 237
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P+I+TY L+ ++D E++N V+ L L++ +YT +I GL ++ +
Sbjct: 238 RAKGI-FPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGR 296
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+EA + + EM E GL P + +L L
Sbjct: 297 SEEAFKLYDEMTEAGLTPDDRVYTSLVSSL 326
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 134/291 (46%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
++ +YT +I CKI A E+ E+G+ NV TY L++GVC+ +
Sbjct: 34 ADIHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALIDGVCKAGEMEA---- 89
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE + +EM+ RG++ + ++ ++ Y + + M++KG + T
Sbjct: 90 ------AEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYT 143
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ L + E+A+ L M+ GV P+ +Y Y + A KL+++MK
Sbjct: 144 LNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMK 203
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN TYN+LI RM E+ + ++ + D+ +YT L+HG C K
Sbjct: 204 KAG-GEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKL 262
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A + F E+ +KGL VT+ + GL + +L ++ E +T
Sbjct: 263 DDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLT 313
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 1/227 (0%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
I E++F+EM +GI+ D+ +++V++ + + + + + EKG+ V TY +
Sbjct: 17 IDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGA 76
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ +C G +E AE L+ EM G+ + YN Y R + A K+ M++
Sbjct: 77 LIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKG 136
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
+I+T N + LN+ + + + + ++ SYT LI C++ + EA
Sbjct: 137 F-ENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEA 195
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ F EM + G P VT+ L G + ++ L+ ++ + I
Sbjct: 196 KKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGI 242
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 139/282 (49%), Gaps = 32/282 (11%)
Query: 3 NVKMYTSLIYGWCK-INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+ K + ++ GWC I AER EM GV+ +VV+Y+ +++ + SL+
Sbjct: 214 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLN----- 268
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK----EKGICP 117
K+FD M+ IEPD ++ V+H ++A + N MK EKG+ P
Sbjct: 269 -----KVLKLFDRMKKESIEPDRKVYNAVIHALAKA---SFVSEARNLMKTMEEEKGMEP 320
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V TY S++K LC + E+A+++ EM+ G+ P+ TY+ F + R ++ +
Sbjct: 321 NVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKM 380
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
R+M C P + TY +LI D V +WN +K +G DL SY ++IHGL
Sbjct: 381 RKMG----CQPTVDTYIMLIRKLCRWRDFDNVLLLWNEMKEKGVGPDLSSYIVMIHGLFL 436
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 279
K +EA Y+ EM EKG+ P + DM+++W
Sbjct: 437 NGKIEEAYGYYKEMKEKGMRPNENV----------EDMIQSW 468
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 19/172 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI CK + + A++ EM+E+G+ P + TY+ F
Sbjct: 320 PNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHA----------------F 363
Query: 62 EKTIRNAEKVFD---EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ +R E+VF+ +MR G +P V ++ +++ R L N MKEKG+ P
Sbjct: 364 MRILRTGEEVFELLAKMRKMGCQPTVDTYIMLIRKLCRWRDFDNVLLLWNEMKEKGVGPD 423
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
+++Y ++ L G+IE+A EM G+ P+ + + G++ A
Sbjct: 424 LSSYIVMIHGLFLNGKIEEAYGYYKEMKEKGMRPNENVEDMIQSWFSGKQYA 475
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 141/287 (49%), Gaps = 14/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + L++ + ++ + D +RF +MI G +P V TYN++++ +C+
Sbjct: 96 PKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCK---------- 145
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A +F+EM+ RG+ PD +++ ++ Y + + ++ MK P V T
Sbjct: 146 EGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVIT 205
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C C G++ E EM ++G+ P+ +Y+ + A+K Y M+
Sbjct: 206 YNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMR 265
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L VPN HTY L+ + + + + + + + ++ +YT LI GLC+ ++
Sbjct: 266 RLGL-VPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERI 324
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
KEA + F +M+ G++P ++ L G +++ + R + LDE
Sbjct: 325 KEAEELFGKMVTAGVIPNLASYTALIHGFVKA---KNMDRALELLDE 368
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 18/303 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YTSL+ +CKI + A R EM + GVE NVVTY L++G+C ER
Sbjct: 270 VPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDV------ER 323
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I+ AE++F +M G+ P++ S++ ++H + +A +L+ L+ MK +GI P +
Sbjct: 324 ----IKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLL 379
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y + + LC +IE A+ ++ EM G+ + Y Y ++ + + L +M
Sbjct: 380 LYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEM 439
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK--GSELGLDLDS--YTMLIHGLC 236
E D+ V + T+ +LI L + +V + ++ ++ GL ++ YT +I GLC
Sbjct: 440 LELDIEVTAV-TFCVLID---GLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLC 495
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSE 296
++ + + A F +M +KGL+P + + +L G ++ + L+ K+ E + G+
Sbjct: 496 KEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGAR 555
Query: 297 FQN 299
F +
Sbjct: 556 FGD 558
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 126/274 (45%), Gaps = 11/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y S+I G+ K+ R+D F EM EP+V+TYN L+N C+ L
Sbjct: 165 IPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLE 224
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F F EM+ G++P+V S+S ++ + + Q +L M+ G+ P
Sbjct: 225 F----------FREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEH 274
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS+V C G + DA L EM + GV + TY + A +L+ +M
Sbjct: 275 TYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKM 334
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +PN+ +Y LI F+ MD E+ + +KG + DL Y I LC +K
Sbjct: 335 VTAGV-IPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEK 393
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ A EM EKG+ + TL +S+
Sbjct: 394 IEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSE 427
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 16/207 (7%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
VFD + IE D+ F L +S+ MK + P + ++
Sbjct: 65 VFDALFSVLIEEDM--FEEALQCFSK-------------MKRCRVFPKTRSCNGLLHKFA 109
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
G+ + + +M+ G P+ TYN D A L+ +MK L +P+
Sbjct: 110 RLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGL-IPDT 168
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
TYN +I + + R+D + +K D+ +Y LI+ C+ K + ++F E
Sbjct: 169 VTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFRE 228
Query: 251 MIEKGLLPQKVTFETLYRGLIQSDMLR 277
M + GL P V++ TL + DM++
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQ 255
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 152/298 (51%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN ++ SL+YG C ++R + AE EM ++GV PNVV +N ++ +C
Sbjct: 512 PNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCN---------- 561
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A+++ D M G+ P+V S++ ++ + A + + L+ M G+ P + +
Sbjct: 562 EGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLIS 621
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ C GRI++A L EM+R GV+P A TY+ + + + A +LY M
Sbjct: 622 YDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMI 681
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +I+TYNI++ N +D +I+ + +L ++ ++T++I L + +
Sbjct: 682 KSGQ-QWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRK 740
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
K+A F + GL+P VT+ + + +IQ +L + L +++ T S N
Sbjct: 741 KDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLN 798
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 14/272 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERG---VEPNVVTYNVLLNGVCRRASLHP 57
MPNV +L+ G C R++ A L M E G PNVVTYN +++G+C+
Sbjct: 158 MPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCK------ 211
Query: 58 NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
+ + AE V M +G++ DV ++S ++ +A + L M +KG+ P
Sbjct: 212 ----AQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 267
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V TY +++ LC ++ AE +L M+ GV P TYN + + A +
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVL 327
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+ M + D+ P+I TYN LI +++ V + L D+ +Y++L+ LC+
Sbjct: 328 QHMIDKDV-KPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCK 386
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
K EA + F MI KG+ P + L G
Sbjct: 387 NGKCTEARKIFYCMIRKGIKPNVTIYGILLHG 418
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 138/298 (46%), Gaps = 16/298 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I G CK +D AE L MI++GV+ +VVTY+ +++G+C+
Sbjct: 197 PNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCK---------- 246
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + AE V M +G++PDV +++ ++ +A + L M +KG+ P V T
Sbjct: 247 AQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVT 306
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC ++ A+ +L M+ V P +TYNC Y + ++ +M
Sbjct: 307 YNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMY 366
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P++ TY++L+ + R+I+ + + ++ Y +L+HG +
Sbjct: 367 ARGL-DPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAI 425
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFG 294
+ M+ G+ P F + + +I M R + L + +T+G
Sbjct: 426 ADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYG 483
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 140/331 (42%), Gaps = 59/331 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+++ Y LI+G+ R L EM RG++P+VVTY++LL+ +C+
Sbjct: 337 PDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKI 396
Query: 52 -----RASLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R + PN I + + D M GI P+ F+IVL Y++
Sbjct: 397 FYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAK 456
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ + M + G+ P V TY ++ LC GR++DA +M+ +GV+P++
Sbjct: 457 KAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVV 516
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKED--------------DLCV--------------- 187
+N A +L+ +M + +LC
Sbjct: 517 FNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSME 576
Query: 188 -----PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
PN+ +YN LIG R D ++ + + L DL SY L+ G C+ +
Sbjct: 577 RVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRID 636
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
A F EM+ KG+ P VT+ T+ +GL +
Sbjct: 637 NAYCLFREMLRKGVTPGAVTYSTILQGLFHT 667
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 30/294 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
P++ Y+ L +C++ RI+ G +++ G N V N LLNG+C
Sbjct: 88 PDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDI 147
Query: 51 --RRA---SLHPNERF----------EKTIRNAEKVFDEMRVRG---IEPDVTSFSIVLH 92
RR PN EK + A ++ M G P+V +++ ++
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIID 207
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+A + L M +KG+ V TY++++ LC ++ AE +L M+ GV P
Sbjct: 208 GLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 267
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
TYN + + A + + M + + P++ TYN +I +D +
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGV-KPDVVTYNTIIDGLCKAQAVDRADGV 326
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
H+ ++ D+ +Y LIHG +WKE + EM +GL P VT+ L
Sbjct: 327 LQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLL 380
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 111/260 (42%), Gaps = 13/260 (5%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR--- 76
ID A + E++ +V +N LLN V R R T A +F+ M
Sbjct: 30 IDDALKLFDELLPHARPASVRAFNHLLNVVAR-------ARCSSTSELAVSLFNRMARAC 82
Query: 77 VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
+ PD+ ++SI+ + R + + + + G ++ LC R++
Sbjct: 83 SNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVD 142
Query: 137 DAEE-LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL--CVPNIHTY 193
+A + LL M G P+ + N K K A++L M ED C PN+ TY
Sbjct: 143 EAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTY 202
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N +I +D + H+ + LD+ +Y+ +I GLC+ Q A MI+
Sbjct: 203 NTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMID 262
Query: 254 KGLLPQKVTFETLYRGLIQS 273
KG+ P VT+ T+ GL ++
Sbjct: 263 KGVKPDVVTYNTIIDGLCKA 282
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV--CRRASLHPNE 59
P++ Y +L+ G+CK RID A EM+ +GV P VTY+ +L G+ RR S E
Sbjct: 617 PDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFS-EAKE 675
Query: 60 RFEKTIRNAE------------------------KVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ I++ + K+F + + + P++ +F+I++ V
Sbjct: 676 LYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLF 735
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + ++D + G+ P V TY ++K + G +++ + L M ++G +P +
Sbjct: 736 KGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSV 795
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
N + GR + A ++ E + + T ++LI +F
Sbjct: 796 MLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSL-EASTTSLLISLF 839
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 147/317 (46%), Gaps = 27/317 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PN+ Y+S+I G CK + A L EM++ G +PNV T+ L++G+C++
Sbjct: 312 PNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRL 371
Query: 54 --------SLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ PN E+ + AE +F+ M+ +G+ P+ +++ ++ +
Sbjct: 372 FLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHC 431
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A + + + M +G P TY S+V LC GR E+A +LL +N +
Sbjct: 432 KAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGV 491
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY E R D N A+ +M + P+IH Y LI F N M ++++
Sbjct: 492 TYTILISEQCKRADMNQALVFLNKMFKVGF-QPDIHLYTTLIAAFCRQNMMKDSEKLFDE 550
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
V L ++YT +I G C ++K A ++F +M + G P +++ L GL +
Sbjct: 551 VIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESR 610
Query: 276 LRTWRRLKKKLDEESIT 292
L R+L + ++ ++
Sbjct: 611 LDEARQLYDTMIDKGLS 627
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 117/266 (43%), Gaps = 46/266 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YT+LI G CK A + M G PN TYN +++G+C+R R
Sbjct: 417 VPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRG------R 470
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ + F IE D +++I++ + +L LN M + G P +
Sbjct: 471 AEEAFKLLNTGFQNQ----IEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIH 526
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT+++ C ++D+E+L E+++ G++P+ ETY Y K + A+K +++M
Sbjct: 527 LYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKM 586
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D C P+ +Y LI GLC++ +
Sbjct: 587 -SDHGCAPDSISYGALIS-----------------------------------GLCKESR 610
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
EA Q + MI+KGL P +VT TL
Sbjct: 611 LDEARQLYDTMIDKGLSPCEVTRVTL 636
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 10/251 (3%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
++ A EM RGV P+ TY ++ G CR + + A++ EM RG
Sbjct: 225 VEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGN----------VLEADRWICEMMERG 274
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
D + ++++ + ++ + + + G+ P + Y+S++ LC G ++ A
Sbjct: 275 FVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAF 334
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
ELL EMV+NG P+ T+ + A +L+ ++ D PN+HTY +I
Sbjct: 335 ELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISG 394
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ ++ ++ +K L + ++YT LI G C+ + +A + M +G P
Sbjct: 395 YCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPN 454
Query: 260 KVTFETLYRGL 270
T+ ++ GL
Sbjct: 455 TCTYNSIVDGL 465
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PN Y S++ G CK R + A + L + +E + VTY +L++ C+RA ++
Sbjct: 453 PNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVF 512
Query: 58 -NERF--------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
N+ F + ++++EK+FDE+ G+ P +++ ++ Y R
Sbjct: 513 LNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCR 572
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K L++ M + G P +Y +++ LC R+++A +L M+ G+SP T
Sbjct: 573 EKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVT 632
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
EY +D AM + ++ + L + +HT
Sbjct: 633 RVTLTYEYCKTEDFASAMVILERLNK-KLWIRTVHT 667
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
V++ K + ++D + M+ +G+ T ++ +E A + EM GV P
Sbjct: 183 VFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYP 242
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
+ TY Y + A + +M E V N T ++I F + ++ R +
Sbjct: 243 DSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNA-TLTLIITAFCEKSLVN--RAV 299
Query: 213 WNHVKGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
W K +++GL +L +Y+ +I GLC++ K+A + EM++ G P T +L GL
Sbjct: 300 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 359
Query: 271 IQSDMLRTWRRLKKKL 286
+ RL KL
Sbjct: 360 CKKGWTERAFRLFLKL 375
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 136/273 (49%), Gaps = 11/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V ++ L+ CK I A+ L M+++GV P+VVTY+ L++G C
Sbjct: 267 PDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYC----------L 316
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+ VF M G+ P S++I+++ + +L M KGI P T
Sbjct: 317 VNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVT 376
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GRI A +L+ EM NG+ TYN + A+ L +++K
Sbjct: 377 YNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIK 436
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+++TYNILI R+ ++++ + ++ +Y ++I+GLC++ +
Sbjct: 437 DQGI-QPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLF 495
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA +M G++P VT+ET+ R L + D
Sbjct: 496 NEAEVLLSKMENNGIIPDAVTYETIIRALFRKD 528
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 11/284 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V MY +I CK + A + EMI + + P+VVT+N L+ G C L
Sbjct: 198 DVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQL------- 250
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A +F EM ++ I PDV +FSI++ + + + L M ++G+ P V TY
Sbjct: 251 ---KEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTY 307
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+S++ C + A+ + M R GV+P A +YN K + A+ L+++M
Sbjct: 308 SSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCC 367
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ P+ TYN LI L R+ ++ + + + + D+ +Y LI LC+
Sbjct: 368 KGI-APDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHID 426
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A ++ ++G+ P T+ L GL + L+ + + + L
Sbjct: 427 KAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDL 470
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 135/285 (47%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CKI A + L ++ + V +VV YN+++N +C+ +K +
Sbjct: 167 YRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCK----------DKAVS 216
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A +++ EM + I PDV +F+ ++ + + + + + M K I P V T++ +V
Sbjct: 217 DAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILV 276
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G I A+ +L M++ GV P TY+ Y + N A ++ M +
Sbjct: 277 DALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGV- 335
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+ H+YNI+I + +D ++ + + D +Y LI GLC+ + A Q
Sbjct: 336 APHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQ 395
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM G+ +T+ +L L ++ + L KK+ ++ I
Sbjct: 396 LVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGI 440
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y SLI G CK+ RI A + + EM G+ +++TYN L++ +C+ N
Sbjct: 372 PDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCK------NHHI 425
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K I +K+ D+ GI+P + +++I++ + + + + D + KG T
Sbjct: 426 DKAIALVKKIKDQ----GIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWT 481
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ LC G +AE LL +M NG+ P A TY + + + A KL R+M
Sbjct: 482 YNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 94/222 (42%), Gaps = 9/222 (4%)
Query: 55 LHP----NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ--LSLDKLN 108
LHP + F+ + N F M P + F+ +L +A+ ++ +
Sbjct: 26 LHPFIPKSNDFD--VNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSH 83
Query: 109 FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168
++ KGI PT+ T+ +V C C G + A + ++++ G P+ T+N
Sbjct: 84 QLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNG 143
Query: 169 DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
A+ + + + + +Y LI + ++ ++G + D+ Y
Sbjct: 144 KLKEALHFHDHVIALGFHLDQV-SYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMY 202
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++I+ LC+ + +A Q + EMI K + P VTF +L G
Sbjct: 203 NIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGF 244
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A+ L Q++ + P I T+NIL+ + L M I+ + ++ LI
Sbjct: 78 AISLSHQLELKGI-TPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLI 136
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+G+C K KEA + +I G +V++ TL GL + R ++ KK++
Sbjct: 137 NGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIE 191
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 15/269 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +I G+C R A+R L +MIER + P+V+T+N L++ AS+ + F
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS-----ASVKEGKLF 383
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AEK+ DEM R I PD +++ +++ + + ++ D M + P V T
Sbjct: 384 E-----AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR----FDDAKHMFDLMASPDVVT 434
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C R+++ +LL E+ R G+ + TYN + + N A L+++M
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+C P+ T NIL+ F +++ E++ ++ S++ LD +Y ++IHG+C+ K
Sbjct: 495 SHGVC-PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA F + G+ P T+ + G
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 145/334 (43%), Gaps = 63/334 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLG---------------EMIERGVEPNVVTYNVLL 46
P+V + +L++G C +RI A G +M+E G+ P V+T+N L+
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233
Query: 47 NGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK 106
NG+C E + A + ++M +G+ DV ++ +++ + + +L+
Sbjct: 234 NGLC----------LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 107 LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRG 166
L+ M+E I P V Y++++ LC G DA+ L EM+ G++P+ TYNC +
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 167 RKDANGAMKLYRQMKEDDL---------------------------------CV-PNIHT 192
+ A +L R M E ++ C+ P+ T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
YN +I F NR D + +++ + D+ ++ +I C ++ E Q E+
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+GL+ T+ TL G + D L + L +++
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 128/305 (41%), Gaps = 40/305 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V + +LI G C R+ A + +M+ +G+ +VVTY ++NG+C+
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD------- 276
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A + +M I+PDV +S ++ + + + M EKGI P V T
Sbjct: 277 ---TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
Y ++ CS GR DA+ LL +M+ ++P T+N A KL +M
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 181 ----------------------KEDD-------LCVPNIHTYNILIGMFMALNRMDMVRE 211
+ DD + P++ T+N +I ++ R+D +
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ + L + +Y LIHG CE A F EMI G+ P +T L G
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 272 QSDML 276
+++ L
Sbjct: 514 ENEKL 518
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 6/277 (2%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF- 61
N+ + LI +C +++ + G++ + G +P+VVT+N LL+G+C +
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 62 ----EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
E A +FD+M G+ P V +F+ +++ + + +N M KG+
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V TY ++V +C G + A LL +M + P Y+ + A L+
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+M E + PN+ TYN +I F + R + + + E+ D+ ++ LI +
Sbjct: 320 SEMLEKGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ K EA + EM+ + + P VT+ ++ G + +
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + ++I +C+ R+D + L E+ RG+ N TYN L++G C +L+
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA---- 485
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ +F EM G+ PD + +I+L+ + K + +L+ ++ I
Sbjct: 486 ------AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ +C ++++A +L + +GV P +TYN + G+ + A L+ +MK
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
D+ P+ TYN LI + +D E+ + ++ + G D++T+
Sbjct: 600 -DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN--GFSGDAFTI 645
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 119/284 (41%), Gaps = 26/284 (9%)
Query: 14 WCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFD 73
+ ++NR D+A +M R + N+ ++N+L+ C L + F
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKL----------SFSLSTFG 165
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK---------------GICPT 118
++ G +PDV +F+ +LH + +L +M E G+ P
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V T+ +++ LC GR+ +A L+ +MV G+ TY D A+ L
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M+E + P++ Y+ +I + +++ + + ++ +Y +I G C
Sbjct: 286 KMEETHI-KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+W +A + +MIE+ + P +TF L ++ L +L
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N +IG+F+ +NR D+ ++ ++ + L++ S+ +LI C+ K + F ++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 254 KGLLPQKVTFETLYRGLIQSD 274
G P VTF TL GL D
Sbjct: 170 LGFQPDVVTFNTLLHGLCLED 190
>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 393
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 132/273 (48%), Gaps = 11/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ +T+L+ G CK + A L MI++ VEPN+VTYN L++G
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYF----------L 170
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A+++F+ + +RG+ P+V S+ ++++ + + + M K + P
Sbjct: 171 VKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVA 230
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC RI D + +GEM G + TYN + A+ L ++K
Sbjct: 231 YNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIK 290
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PNI+TY IL+ R+ +E++ + LD YT++I+GLC++
Sbjct: 291 NQGI-RPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFL 349
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA +M + P VT+E R L +SD
Sbjct: 350 DEALSLLSKMEDNKCTPDGVTYEITIRALFESD 382
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 140/298 (46%), Gaps = 37/298 (12%)
Query: 22 MAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80
+A+ F IER V+P+VV YN +++ +C+ +K + + ++ EM + I
Sbjct: 21 IAKGFHLNHIERLLVKPDVVMYNTIIDILCK----------DKLVSDGCDLYSEMIDKKI 70
Query: 81 EPDVTSFSIVLH-----VYSRAHKP---------QLSLDKLNFMKEKGICPTVATYTSVV 126
PDV +++ +++ VY + K + ++ LN M K + P + T+T++V
Sbjct: 71 YPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLV 130
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G ++ A +L M++ V P+ TYN Y K+ N A +L+ + +
Sbjct: 131 DGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGM- 189
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+ +Y ++I +D ++ + + D +Y LI GLC+ ++ +
Sbjct: 190 TPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWD 249
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
+ EM ++G +T+ +L GL ++ + +++IT ++ +N +P
Sbjct: 250 FIGEMHDRGQPANIITYNSLLDGLCKNHQV-----------DKAITLLTKIKNQGIRP 296
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 10/157 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y SLI G CK RI F+GEM +RG N++TYN LL+G+C+ N +
Sbjct: 225 VPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCK------NHQ 278
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K I + +++ +GI P++ +++I++ + + + + + + KG
Sbjct: 279 VDKAI----TLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDAR 334
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
YT ++ LC G +++A LL +M N +P TY
Sbjct: 335 IYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTY 371
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 135/265 (50%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+S+I CK +D A L M++ GV PN +TYN +L+G C +S P E
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYC--SSEQPKE-- 284
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +MR G+EPDV +++ ++ + + + + M ++G+ P +AT
Sbjct: 285 ------AIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIAT 338
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ + G + + LL MVRNG+ P +N Y ++ + AM ++ +M+
Sbjct: 339 YCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMR 398
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L PN+ TY +IG+ +D + + L ++ YT LIH LC KW
Sbjct: 399 QHGL-NPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKW 457
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+A + +EM+++G+ + F ++
Sbjct: 458 DKAEELILEMLDRGICLNTIFFNSI 482
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 146/299 (48%), Gaps = 11/299 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ +YTSLI+ C ++ D AE + EM++RG+ N + +N +++ C+
Sbjct: 439 PNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCK---------- 488
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +EK+FD M G++P+V ++S ++ Y A K + L+ M G+ P T
Sbjct: 489 EGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVT 548
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R++DA L EMV +GVSP+ TYN + + A +LY +
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGIT 608
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + TYNI++ N D ++ ++ ++L L+ ++ ++I L + +
Sbjct: 609 KSGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 667
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
EA FV GL+P T+ + +I +L +L +++ T S N+
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNF 726
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 141/298 (47%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G+ K D A EM++R + P+VVTY+ ++ +C+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCK---------- 243
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A +V M G+ P+ +++ +LH Y + +P+ ++ L M+ G+ P V T
Sbjct: 244 GQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR +A ++ M + G+ P TY + Y K A M +
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY-ATKGALVEMHALLDLM 362
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ H +NILI + ++D +++ ++ L ++ +Y +I LC+
Sbjct: 363 VRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSV 422
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+A YF +MI++GL P + + +L L D L ++ + I + F N
Sbjct: 423 DDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFN 480
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 147/348 (42%), Gaps = 91/348 (26%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN Y S+++G+C + A FL +M GVEP+VVTYN L++ +C+ N R
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCK------NGR 316
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTS---------------------------------- 86
+ A K+FD M RG+EPD+ +
Sbjct: 317 STE----ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHH 372
Query: 87 -FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
F+I++ Y++ K ++ + M++ G+ P V TY +V+ LC G ++DA +M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432
Query: 146 VRNGVSPSAETYN------CFFKEYRGRKDANGAMKLYRQMKEDDLCV------------ 187
+ G++P+ Y C F ++ + A +L +M + +C+
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKW------DKAEELILEMLDRGICLNTIFFNSIIHSH 486
Query: 188 ----------------------PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL 225
PN+ TY+ LI + +MD ++ + + + D
Sbjct: 487 CKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDC 546
Query: 226 DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+Y LI+G C + +A F EM+ G+ P +T+ + +GL +
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 594
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 139/333 (41%), Gaps = 43/333 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RRAS----- 54
P V Y LI C+ R+D+ LG ++++G +T+ LL G+C +R S
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 55 -----------------------LHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
L R ++ + + D+ R G PDV S++ V+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD-RGGGSAPDVVSYTTVI 203
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ + + + + M ++ I P V TY+S++ LC ++ A E+L MV+NGV
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVM 263
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P+ TYN Y + A+ ++M+ D + P++ TYN L+ R R+
Sbjct: 264 PNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGV-EPDVVTYNSLMDYLCKNGRSTEARK 322
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
I++ + L D+ +Y L+ G K E M+ G+ P F L
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382
Query: 272 QSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
+ ++K+DE + F S+ + + P
Sbjct: 383 K----------QEKVDEAMLVF-SKMRQHGLNP 404
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
+A VFDE+ RG + + L +R H P ++ + N M G + PTV TY
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYG 91
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C C GR++ LG +V+ G A T+ K K + AM + + +
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV---KGSELGLDLDSYTMLIHGLCEKQK 240
C+P++ + IL+ NR E+ + + +G D+ SYT +I+G ++
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+A + EM+++ + P VT+ ++ L
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAAL 241
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 122/282 (43%), Gaps = 28/282 (9%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V P V TY +L+ CR L + + N K +G + +F+ +L
Sbjct: 83 VTPTVHTYGILIGCCCRAGRL---DLGFAALGNVVK-------KGFRVEAITFTPLLKGL 132
Query: 95 SRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN---GV 150
+ ++D L M E P V + T ++K LC R ++A ELL M + G
Sbjct: 133 CADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGS 192
Query: 151 SPSAETY----NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+P +Y N FFKE D++ A Y +M D P++ TY+ +I M
Sbjct: 193 APDVVSYTTVINGFFKE----GDSDKAYSTYHEML-DRRISPDVVTYSSIIAALCKGQAM 247
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D E+ + + + + +Y ++HG C ++ KEA + +M G+ P VT+ +L
Sbjct: 248 DKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSL 307
Query: 267 YRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNYHFK 303
L ++ R++ K+ L+ + T+ + Q Y K
Sbjct: 308 MDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATK 349
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 25/197 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV--CRRASL---- 55
P+ Y +LI G+C+++R+D A EM+ GV PN++TYN++L G+ RR +
Sbjct: 544 PDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 603
Query: 56 -----HPNERFEKTIRN--------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ E + N A ++F + + ++ + +F+I++ +
Sbjct: 604 YVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 663
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D G+ P TY + + + G +E+ ++L M NG + +
Sbjct: 664 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGM 723
Query: 157 YNCFFKEYRGRKDANGA 173
N +E R + A
Sbjct: 724 LNFIVRELLQRGEITRA 740
>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 151/283 (53%), Gaps = 12/283 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV+ + L+ +CK I A+ +G M+ GVEP+VVTYN +++G C + +
Sbjct: 279 MPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQM----- 333
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A KVF+ M +G P++ ++S ++H + + +L L M G+ P V
Sbjct: 334 -----GDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVV 388
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+++++ C G+ E A+EL M + P+ +T + + A+ L+R+M
Sbjct: 389 TWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREM 448
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ +L + N+ YNI++ + +++ +E+++ + + +D+ +YT +I GLC++
Sbjct: 449 EKMNLEL-NVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGL 507
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRL 282
+A ++M E G LP + T+ RGL+Q D+ R+ + L
Sbjct: 508 LDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYL 550
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 135/298 (45%), Gaps = 27/298 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V T +I C +N LG M + GV+P VVT+ L+NG+C ++ RF
Sbjct: 104 PDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARF 163
Query: 62 EKTIRN-------------------------AEKVFDEMRVRGIEPDVT-SFSIVLHVYS 95
++ + A ++++ R + DV ++S ++
Sbjct: 164 ADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLC 223
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ +L+ + M KGI P + Y S++ LC+ GR ++A LLG M+R G+ P+ +
Sbjct: 224 KDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQ 283
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
T+N + + A + M + P++ TYN +I L++M +++
Sbjct: 284 TFNVLVDNFCKDGMISRAKTIMGFMVHVGV-EPDVVTYNSVISGHCLLSQMGDAVKVFEL 342
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ +L +Y+ LIHG C+ + +A EM+ GL P VT+ TL G ++
Sbjct: 343 MIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKA 400
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 107/227 (47%), Gaps = 26/227 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA------- 53
+PN+ Y+SLI+GWCK I+ A LGEM+ G+ P+VVT++ L+ G C+
Sbjct: 349 LPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKE 408
Query: 54 --------SLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
HPN + I + A +F EM +E +V ++IVL
Sbjct: 409 LFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMC 468
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
K + + + + KGI V YT+++K LC G ++DAE LL +M NG P+
Sbjct: 469 SFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEF 528
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
TYN F + R D + + K MK L + T +LI F A
Sbjct: 529 TYNVFVRGLLQRYDISRSTKYLLLMKGKGLS-ADATTTELLISYFSA 574
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 122/290 (42%), Gaps = 46/290 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SLI+G C R A LG M+ +G+ PNV T+NVL++ C+
Sbjct: 245 PDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCK---------- 294
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I A+ + M G+EPDV +++ V+ + + ++ M KG P + T
Sbjct: 295 DGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVT 354
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ C I A LLGEMV +G++
Sbjct: 355 YSSLIHGWCKTKNINKALFLLGEMVNSGLN------------------------------ 384
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P++ T++ LIG F + + +E++ + + +L + +++ GL + Q
Sbjct: 385 ------PDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFH 438
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EA F EM + L V + + G+ L + L L + I
Sbjct: 439 SEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGI 488
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 6/207 (2%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI+PDV + +I+++ + L M + G+ PTV T+ +++ LC+ G + A
Sbjct: 101 GIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARA 160
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
+ G ++ TY D +GA+ ++K + + + Y+ ++
Sbjct: 161 ARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMD 220
Query: 199 MFMALNRMDMVREIWNHVKG-SELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
+L + MV E N G + G+ DL +Y LIHGLC +WKEA M+ KG
Sbjct: 221 ---SLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKG 277
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRL 282
++P TF L + M+ + +
Sbjct: 278 IMPNVQTFNVLVDNFCKDGMISRAKTI 304
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ ++ G K A EM + +E NVV YN++L+G+C L+
Sbjct: 420 PNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLN----- 474
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A+++F + +GI+ DV +++ ++ + + + L M+E G P T
Sbjct: 475 -----DAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFT 529
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y V+ L I + + L M G+S A T + K+ N A+ ++ Q
Sbjct: 530 YNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYFSANKE-NSALHVFLQ 586
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 130/264 (49%), Gaps = 11/264 (4%)
Query: 11 IYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEK 70
+ +CK ++ A+ M+++G +PNVVTY+ L++G C K + A+
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYC----------LVKEVNKAKS 275
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+F+ M G+ PD+ S++I+++ + + +++ M + I P V TY S++ LC
Sbjct: 276 IFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLC 335
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
G+I A +L+ EM G P TY+ + A+ L ++K+ L PN+
Sbjct: 336 KSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGL-QPNM 394
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
+TY ILI R + + I+ + +++++YT++IH C + EA +
Sbjct: 395 YTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSK 454
Query: 251 MIEKGLLPQKVTFETLYRGLIQSD 274
M E G +P VT+E + R L D
Sbjct: 455 MEENGCIPNAVTYEIIIRSLFDKD 478
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ Y LI G+CKI D A EM R + PNVVTYN L++G+C+
Sbjct: 287 PDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGK------- 339
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A K+ DEM RG PD+ ++S +L + H ++ L +K++G+ P + T
Sbjct: 340 ---ISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYT 396
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ LC GR EDA+ + +++ G + + TY + A+ + +M+
Sbjct: 397 YTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKME 456
Query: 182 EDDLCVPNIHTYNILI 197
E+ C+PN TY I+I
Sbjct: 457 ENG-CIPNAVTYEIII 471
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y SLI G CK +I A + + EM +RG P+++TY+ LL+ +C+ HP ++
Sbjct: 321 IPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKN---HPGDK 377
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + +++ +G++P++ +++I+++ + +P+ + + + KG V
Sbjct: 378 -------AIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVN 430
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ C+ G +A +L +M NG P+A TY + + + + A KL +M
Sbjct: 431 TYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEM 490
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 141/280 (50%), Gaps = 11/280 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+T LI+ +C+ +R +A LG+M++ G +P++VT LLNG C+ RF++ +
Sbjct: 653 FTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQ------GNRFQEAV- 705
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ D M G+EP+V ++ V++ + +L+ M++KGI TY +++
Sbjct: 706 ---SLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLI 762
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC+ GR DA LL +MV+ + P+ + + + A LY++M +
Sbjct: 763 SGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSV- 821
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PNI TYN LI F R+ + +++ + D+ +Y LI G C+ ++ ++ +
Sbjct: 822 HPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 881
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
F EM +GL+ T+ TL G Q+ L +++ ++
Sbjct: 882 LFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 921
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 146/314 (46%), Gaps = 26/314 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PNV +Y ++I G CK ++ A M ++G+ + VTYN L++G+C
Sbjct: 718 PNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARL 777
Query: 54 -------SLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ PN F E + A+ ++ EM R + P++ +++ +++ +
Sbjct: 778 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCI 837
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + M KG P V TY +++ C R+ED +L EM G+ A T
Sbjct: 838 QGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFT 897
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN Y N A K++ +M + + P+I TYNIL+ +++ + +
Sbjct: 898 YNTLIHGYCQAGKLNVAQKVFNRMVDCGV-PPDIVTYNILLDCLCNNGKIEKALVMVEDL 956
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ +++ +D+ +Y ++I G+C K KEA F + KG+ + + T+ GL ++ +
Sbjct: 957 QKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLR 1016
Query: 277 RTWRRLKKKLDEES 290
R +L ++ E+
Sbjct: 1017 READKLCTRMKEDG 1030
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 139/277 (50%), Gaps = 12/277 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+T LI+ +C+ +R+ +A LG+M++ G +P++VT+ LL+G C R +H
Sbjct: 103 FTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIH---------- 152
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG-ICPTVATYTSV 125
+A + M G EP+V ++ ++ + ++L+ LN M++KG + + TY ++
Sbjct: 153 DAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTL 212
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ LC G A +L +M + ++P T+ + + + + A +LY+QM + +
Sbjct: 213 LTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSI 272
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
PN TYN LI R+ ++ ++ + ++ +Y LI+G C+ ++ ++
Sbjct: 273 G-PNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGM 331
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ F M +GL+ T+ TL G Q LR + +
Sbjct: 332 KLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDI 368
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 141/302 (46%), Gaps = 16/302 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ SL+ G+C+ NR A + M E G+EPNVV YN ++NG+C+ L+
Sbjct: 683 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLN----- 737
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA ++F M +GI D +++ ++ + + + L M ++ I P V
Sbjct: 738 -----NALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIF 792
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ G + +A+ L EM+R V P+ TYN + + A ++ M
Sbjct: 793 FTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMV 852
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P++ TYN LI F R++ +++ + L D +Y LIHG C+ K
Sbjct: 853 SKG-CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKL 911
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFGSE 296
A + F M++ G+ P VT+ L G I+ ++ K ++D + IT+
Sbjct: 912 NVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNII 971
Query: 297 FQ 298
Q
Sbjct: 972 IQ 973
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 153/356 (42%), Gaps = 62/356 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
P++ + SL++G+C NRI A + M++ G EPNVV YN L++ +C+ ++
Sbjct: 133 PSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALEL 192
Query: 58 -NER---------------------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
NE + R A ++ +M R I PDV +F+ ++ +
Sbjct: 193 LNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFV 252
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + M + I P TY S++ LC GR+ A++ M G P+
Sbjct: 253 KQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVV 312
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI--- 212
TYN + + MKL+++M + L V + TYN LI + + ++ + ++I
Sbjct: 313 TYNTLINGFCKSRRVEDGMKLFQRMYREGL-VGDTFTYNTLIHGYCQVGKLRVAKDIFSW 371
Query: 213 --------------------------------WNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+N ++ E L + +Y ++IHGLC+ K
Sbjct: 372 MVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADK 431
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSE 296
+EA + F + +G+ P T+ + GL ++ R L +++ E+ I +E
Sbjct: 432 VEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAE 487
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 130/270 (48%), Gaps = 17/270 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+LI + K + A+ EMI R V PN++TYN L+NG C + L
Sbjct: 788 PNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLG----- 842
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A+ +FD M +G PDV +++ ++ + ++ + + + M +G+ T
Sbjct: 843 -----DAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFT 897
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C G++ A+++ MV GV P TYN A+ + ++
Sbjct: 898 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 957
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG-SELGLDLDS--YTMLIHGLCEK 238
++ + V +I TYNI+I + R D V+E W + + G+ LD+ Y +I GLC
Sbjct: 958 KNQMDV-DIITYNIII---QGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRN 1013
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+EA + M E G +P + ++ R
Sbjct: 1014 GLRREADKLCTRMKEDGFMPSERIYDETLR 1043
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 145/320 (45%), Gaps = 51/320 (15%)
Query: 21 DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80
D + FL EM++ P+VV + LL + A+L R+E I ++ +M + GI
Sbjct: 48 DALDLFL-EMVQSQPLPSVVDFTRLLTAI---ANL---RRYETVIYFSQ----QMELFGI 96
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
D+ SF+I++H + R + L+L L M + G P++ T+ S++ C RI DA
Sbjct: 97 SHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFS 156
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE---------------DDL 185
L+ MV++G P+ YN D N A++L +M++ L
Sbjct: 157 LVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGL 216
Query: 186 CV--------------------PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL 225
C P++ T+ LI F+ +D +E++ + S +G +
Sbjct: 217 CYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNT 276
Query: 226 DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRR 281
+Y LI+GLC + A + F M KG P VT+ TL G +S D ++ ++R
Sbjct: 277 VTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQR 336
Query: 282 L-KKKLDEESITFGSEFQNY 300
+ ++ L ++ T+ + Y
Sbjct: 337 MYREGLVGDTFTYNTLIHGY 356
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 119/289 (41%), Gaps = 44/289 (15%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
+ D A EM++ P++V + +L + + +F+ I +F +M
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKM------NKFDIVIY----LFHKMENL 644
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI D+ SF+I++H + R + L+L L M + G P++ T S++ C R ++A
Sbjct: 645 GISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEA 704
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV----------- 187
L+ M G+ P+ YN +D N A++++ M++ +
Sbjct: 705 VSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISG 764
Query: 188 -----------------------PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
PN+ + LI F+ + + ++ + + +
Sbjct: 765 LCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPN 824
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ +Y LI+G C + + +A F M+ KG P VT+ TL G +S
Sbjct: 825 ILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKS 873
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 128/313 (40%), Gaps = 43/313 (13%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
+ Y +I+G CK ++++ A + GV+P+ TY +++ G+C+ P
Sbjct: 416 IVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNG---PR----- 467
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF-------MKEKGIC 116
R A+++F M+ GI H+ Q+SL + + E G
Sbjct: 468 --READELFRRMKEDGIICQAEDG----HLGEHGTNNQVSLGTIIICPKRRRSIMESGDL 521
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRN------GVSPSAETYN--------CFFK 162
+ T++ L I + + G + R+ G +P + +++
Sbjct: 522 YYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHH 581
Query: 163 EYRGRKDA-------NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
YR R + + A L+ +M + +P+I + ++ +N+ D+V +++
Sbjct: 582 HYRERLRSELHCIKFDDAFGLFCEMLQSRP-IPSIVDFTRVLTAIAKMNKFDIVIYLFHK 640
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
++ + DL S+T+LIH C ++ A +M++ G P VT +L G Q +
Sbjct: 641 MENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNR 700
Query: 276 LRTWRRLKKKLDE 288
+ L + E
Sbjct: 701 FQEAVSLVDSMAE 713
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 133/277 (48%), Gaps = 10/277 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+L++G + N+ A + M+ +G +P++VTY ++NG+C+R P+
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG--EPDL-- 233
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M IE DV ++ ++ + + D N M+ KGI P V T
Sbjct: 234 ------ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ CLC+ GR DA LL +M+ ++P +N + A KLY +M
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P++ YN LI F R++ E++ + L + +YT LIHG + +
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
A F +M+ G+ P +T+ L GL + + T
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 133/271 (49%), Gaps = 14/271 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V +Y ++I G CK +D A +M +G++P+V TYN L++ +C
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW------ 301
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL--NFMKEKGICPTV 119
+A ++ +M + I PD+ F+ ++ + + K + +KL +K K P V
Sbjct: 302 ----SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK-LVEAEKLYDEMVKSKHCFPDV 356
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++K C R+E+ E+ EM + G+ + TY + +D + A +++Q
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M D + P+I TYNIL+ ++ ++ +++ ++ LD+ +YT +I LC+
Sbjct: 417 MVSDGVH-PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
K ++ F + KG+ P VT+ T+ G
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 506
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G+CK R++ EM +RG+ N VTY L++G +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ---------- 403
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ NA+ VF +M G+ PD+ +++I+L + +L +M+++ + + T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++++ LC G++ED +L + GV P+ TY + + A L+ +MK
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 182 EDDLCVPNIHTYNILI 197
ED +PN TYN LI
Sbjct: 524 EDG-PLPNSGTYNTLI 538
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N YT+LI+G+ + D A+ +M+ GV P+++TYN+LL+G+C +
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN-------- 441
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A VF+ M+ R ++ D+ +++ ++ +A K + D + KG+ P V TY
Sbjct: 442 --VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY 499
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ C G E+A+ L EM +G P++ TYN + D + +L ++M+
Sbjct: 500 TTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRS 559
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 11/273 (4%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
++D A G+M++ P++V ++ LL+ + + +F+ I E +M+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKM------NKFDLVISLGE----QMQNL 104
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI ++ ++SI ++ + R + L+L L M + G P++ T S++ C RI +A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ +MV G P T+ A+ A+ L +M C P++ TY +I
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVIN 223
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
D+ + N ++ ++ D+ Y +I GLC+ + +A F +M KG+ P
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 259 QKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
T+ L L RL + E++I
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 137/271 (50%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + L+ CK+ + A G MI+RG+EP+VV+ N L+NG C R +
Sbjct: 265 PDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMS----- 319
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A++VFD M RG P+V S+S +++ Y + +L L M ++ + P T
Sbjct: 320 -----EAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVT 374
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ L GR+ +L+ M +G +P TYN +Y R+ + A+ L++ +
Sbjct: 375 YNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIV 434
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PNI TYNILI RM +EI+ + ++ +Y ++I+GL +
Sbjct: 435 DTGIS-PNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLL 493
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA +EM++ G P VTF+ L R L++
Sbjct: 494 DEAEALLLEMVDDGFPPNAVTFDPLVRALLE 524
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 28/277 (10%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMI-ERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V Y SLI+G+C + A R L EM+ + V P+V T+N+L++ +C+
Sbjct: 230 DVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLG-------- 281
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A VF M RG+EPDV S + +++ + + + + M E+G P V +
Sbjct: 282 --MVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVIS 339
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C +++A LL EM + + P TYNC +G K R +
Sbjct: 340 YSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLL---------DGLSKSGRVLY 390
Query: 182 EDDLC--------VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
E DL P++ TYN+L+ ++ +D ++ H+ + + ++ +Y +LI
Sbjct: 391 EWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILID 450
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
GLC+ + K A + F + KG P T+ + GL
Sbjct: 451 GLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGL 487
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 133/291 (45%), Gaps = 10/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + I + ++ +A + ++++RG + T L+ G+C + F
Sbjct: 89 PSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKG-----RTF 143
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A ++D +G D + +++ + K + +++ L M++ G+ P +
Sbjct: 144 E-----ALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIM 198
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y VV LC G + +A L EMV G+ TYN + G GA++L +M
Sbjct: 199 YNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMV 258
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+++T+NIL+ L + R ++ + L D+ S L++G C +
Sbjct: 259 MKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCM 318
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EA + F M+E+G LP +++ TL G + M+ RL ++ + ++
Sbjct: 319 SEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLV 369
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 135/282 (47%), Gaps = 12/282 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ MY ++ G CK + A EM+ +G+ +V TYN L++G C +F
Sbjct: 194 PNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAG------QF 247
Query: 62 EKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +R + +EM ++ + PDV +F+I++ + + + M ++G+ P V
Sbjct: 248 QGAVR----LLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVV 303
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ +++ C G + +A+E+ MV G P+ +Y+ Y K + A++L +M
Sbjct: 304 SCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEM 363
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +L VP+ TYN L+ R+ ++ ++ S DL +Y +L+ +++
Sbjct: 364 HQRNL-VPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKREC 422
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+A F +++ G+ P T+ L GL + ++ + +
Sbjct: 423 LDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEI 464
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y++LI G+CK+ +D A R L EM +R + P+ VTYN LL+G+ +
Sbjct: 334 LPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGR------ 387
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + + MR G PD+ +++++L Y + +L + + GI P +
Sbjct: 388 ----VLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIR 443
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC GR++ A+E+ + G P+ TYN R R+ +
Sbjct: 444 TYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLR-REGLLDEAEALLLE 502
Query: 181 KEDDLCVPNIHTYNILI 197
DD PN T++ L+
Sbjct: 503 MVDDGFPPNAVTFDPLV 519
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 60/156 (38%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
+DA M+ PS + N K + L + P++ T +I
Sbjct: 37 DDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSI 96
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
I L +M + + + G+D + T L+ GLC K + EA + + KG
Sbjct: 97 FINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKG 156
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+V + TL GL + R L +K+++ +
Sbjct: 157 FSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGV 192
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 150/290 (51%), Gaps = 14/290 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YTSLI CKI + A R EM++ GVE NVVTY L++G+C ER
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA------ER 452
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ AE++F +M G+ P++ S++ ++H + +A +L+ LN +K +GI P +
Sbjct: 453 ----MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y + + LCS +IE A+ ++ EM G+ ++ Y Y + + L +M
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEK 238
KE D+ V + T+ +LI + + +N + ++ GL ++ +T +I GLC+
Sbjct: 569 KELDIEV-TVVTFCVLIDGLCKNKLVSKAVDYFNRIS-NDFGLQANAAIFTAMIDGLCKD 626
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ + A F +M++KGL+P + + +L G + + L+ K+ E
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 132/272 (48%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + L++ + K+ + D +RF +MI G P V TYN++++ +C+
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK---------- 274
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A +F+EM+ RG+ PD +++ ++ + + + ++ MK+ P V T
Sbjct: 275 EGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVIT 334
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C C G++ E EM NG+ P+ +Y+ + A+K Y M+
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L VPN +TY LI + + + N + + ++ +YT LI GLC+ ++
Sbjct: 395 RVGL-VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
KEA + F +M G++P ++ L G +++
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 11/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y S+I G+ K+ R+D F EM + EP+V+TYN L+N C+ L
Sbjct: 294 VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 353
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F + EM+ G++P+V S+S ++ + + Q ++ M+ G+ P
Sbjct: 354 F----------YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS++ C G + DA L EM++ GV + TY + A +L+ +M
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +PN+ +YN LI F+ MD E+ N +KG + DL Y I GLC +K
Sbjct: 464 DTAGV-IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 522
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ A EM E G+ + + TL +S
Sbjct: 523 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 7/205 (3%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE---KGICPTVAT 121
+ A + F +M+ + P S + +LH +++ K D F K+ G PTV T
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD---DVKRFFKDMIGAGARPTVFT 264
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C+C G +E A L EM G+ P TYN + + + + +MK
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C P++ TYN LI F ++ + E + +KG+ L ++ SY+ L+ C++
Sbjct: 325 -DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
++A +++V+M GL+P + T+ +L
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSL 408
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 18/265 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y +LI+G+ K +D A L E+ RG++P+++ Y + G+C
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS--------- 519
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK I A+ V +EM+ GI+ + ++ ++ Y ++ P L L+ MKE I TV
Sbjct: 520 LEK-IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 578
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+ ++ LC + A + + + G+ +A + A L+ Q
Sbjct: 579 TFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQ 638
Query: 180 MKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLC 236
M + L VP+ Y L+ G F N ++ + K +E+G+ LD +YT L+ GL
Sbjct: 639 MVQKGL-VPDRTAYTSLMDGNFKQGNVLEALAL---RDKMAEIGMKLDLLAYTSLVWGLS 694
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKV 261
+ ++A + EMI +G+ P +V
Sbjct: 695 HCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 1/168 (0%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
MK + P + ++ G+ +D + +M+ G P+ TYN D
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A L+ +MK L VP+ TYN +I F + R+D + +K D+ +Y
Sbjct: 278 VEAARGLFEEMKFRGL-VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 336
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
LI+ C+ K +++ EM GL P V++ TL + M++
Sbjct: 337 ALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 145/307 (47%), Gaps = 11/307 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P +Y +LI G+C++ + A +M R + P+ +TYN L+NG+C+
Sbjct: 366 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL-------- 417
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + AE + EM G++P V +F+ ++ Y A + + L+ M++KGI V
Sbjct: 418 --EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVI 475
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++ SVVK C G+I +A +L +M+ V+P+A+ YN Y D A+ L +M
Sbjct: 476 SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKM 535
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + +I TYN+L+ +++D E+ ++ L D+ SY +I C K
Sbjct: 536 KNSGVSA-SIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGD 594
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
+A + EM + G+ P T TL L + + L +++ +++ S
Sbjct: 595 TDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGI 654
Query: 301 HFKPYRR 307
Y R
Sbjct: 655 MVDAYVR 661
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 137/325 (42%), Gaps = 44/325 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++I G K ++ R +M+ G +PNVVTYNVLL+G+CR R
Sbjct: 227 PNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTG------RM 280
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++T + DEM + PD ++SI+ +R + Q L +KG+ T
Sbjct: 281 DET----RALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYT 336
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G++ A+++ +V G+ P+ YN Y +D GA ++ QMK
Sbjct: 337 CSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMK 396
Query: 182 E--------------------------DDLCV--------PNIHTYNILIGMFMALNRMD 207
+DL + P++ T+N LI + +++
Sbjct: 397 SRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLE 456
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ + ++ + D+ S+ ++ C+ K EA +MI K + P + ++
Sbjct: 457 KCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSII 516
Query: 268 RGLIQSDMLRTWRRLKKKLDEESIT 292
I+S L +K+ ++
Sbjct: 517 DAYIESGDTEQALLLVEKMKNSGVS 541
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN ++Y S+I + + + A + +M GV ++VTYN+LL G+CR + + E
Sbjct: 507 PNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 566
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
T+RN +G+ PDV S++ ++ +L+ L M + GI PT+ T
Sbjct: 567 IYTLRN----------QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 616
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++V L S GR+ D E L +M+ V PS+ Y Y ++ + L ++M
Sbjct: 617 CHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMS 676
Query: 182 E 182
E
Sbjct: 677 E 677
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 125/324 (38%), Gaps = 59/324 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PNV Y L+ G C+ R+D + EM + P+ TY++L +G+ R
Sbjct: 262 PNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSL 321
Query: 58 -NERFEK--------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E +K + A++VF+ + G+ P ++ +++ Y +
Sbjct: 322 FAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQ 381
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + MK + I P TY +++ LC + AE+L+ EM ++GV PS ET
Sbjct: 382 VRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVET 441
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKE------------------------------DDL- 185
+N Y + M++ DD+
Sbjct: 442 FNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI 501
Query: 186 ---CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
PN YN +I ++ + + +K S + + +Y +L+ GLC +
Sbjct: 502 YKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQID 561
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
EA + + +GL P V++ T+
Sbjct: 562 EAEELIYTLRNQGLRPDVVSYNTI 585
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 129/306 (42%), Gaps = 13/306 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEM--IERGVEPNVVTYNVLLNGVCRRASLHPNE 59
P+ + ++ +D+A L M E P+ +YNV++ G+ R
Sbjct: 155 PDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGK----- 209
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+A KVFDEM G+ P+ +++ ++ + + + + M G P V
Sbjct: 210 -----GSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNV 264
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY ++ LC GR+++ L+ EM + + P TY+ F ++ + L+ +
Sbjct: 265 VTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAE 324
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ + + +T +IL+ ++ ++++ + + L Y LI+G C+ +
Sbjct: 325 SLKKGVML-GAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVR 383
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ A F +M + + P +T+ L GL + +M+ L ++++ + E N
Sbjct: 384 DLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFN 443
Query: 300 YHFKPY 305
Y
Sbjct: 444 TLIDAY 449
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 84/231 (36%), Gaps = 38/231 (16%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFM--KEKGICPTVATYTS 124
+ F + G PD +++ V+ A ++L L M E P +Y
Sbjct: 140 DVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNV 199
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
V+ L G+ DA ++ EMV GV+P+ TYN + D +L QM D
Sbjct: 200 VIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDG 259
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
PN+ TYN+ L+ GLC + E
Sbjct: 260 P-KPNVVTYNV-----------------------------------LLSGLCRTGRMDET 283
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
EM +LP T+ L+ GL ++ +T L + ++ + G+
Sbjct: 284 RALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGA 334
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 25/138 (18%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA--------- 53
++ Y L+ G C+ ++ID AE + + +G+ P+VV+YN +++ C +
Sbjct: 543 SIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELL 602
Query: 54 ------SLHPNERFEKTIRNA----------EKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+ P R T+ +A E ++ +M + +EP + + I++ Y R
Sbjct: 603 QEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRC 662
Query: 98 HKPQLSLDKLNFMKEKGI 115
M EKGI
Sbjct: 663 ENDSKVASLKKEMSEKGI 680
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 136/294 (46%), Gaps = 11/294 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y LI+ C+ ++ A L +M+ RG P+VVTYN+LL C+
Sbjct: 165 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK---------- 214
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ R A ++ D MR G P+ ++++++ +L+ L + G P+
Sbjct: 215 GRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVN 274
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V+K LCS R DA+EL+ EM+R P+ T+N + A++L +M
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 334
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C NI TYN +I +D + + +K D+ +Y L+ GLC +W
Sbjct: 335 KHG-CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQW 393
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
+A + M + G LP VTF TL L Q ++ + K++ ++ T S
Sbjct: 394 VDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNS 447
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 12/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y L+ G C +D A L + G +P+ V YN +L G+C ER+
Sbjct: 235 PNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSA------ERW 288
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A+++ EM P+ +F++V++ R Q ++ L M + G + T
Sbjct: 289 G----DADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 344
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC ++ A LL +M G P TYN K A +L M
Sbjct: 345 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMT 404
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ C+P+ T+N LIG M E++ + + +Y+ +I GL + K
Sbjct: 405 QNG-CLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKL 463
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A + F EM KG P K+ ++ L L D + + +KL + I+
Sbjct: 464 DQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGIS 513
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + +LI C+ + A +M ++G PN +TY+ +++G+ + L
Sbjct: 409 LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD---- 464
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++F+EM +G PD + ++ + + ++ + +++ GI P
Sbjct: 465 ------QALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTV 517
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
Y +++ LC G+ E A +++ MV +G P TY
Sbjct: 518 LYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTY 554
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+++I G K ++D A EM +G P+ + Y +L L+ ++
Sbjct: 445 PNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAE------CLNDDDTI 497
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ I+ K+ D GI P ++ +L R K + ++D + +M G P T
Sbjct: 498 EEAIQTVRKLQDS----GISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLT 553
Query: 122 YTSVVKCLCSCGRIEDAEELL 142
Y +++ L G + +A ELL
Sbjct: 554 YVILIEGLAYEGYLNEARELL 574
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 83/239 (34%), Gaps = 63/239 (26%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEM----------------VRNG----------- 149
P A +V+ LC GR +DAE ++G R G
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAERVVGACGPAATVVAYGALTDGYCRAGRLGDARRVVGG 160
Query: 150 --VSPSAETYNCFFKEYRGRKDANGAMKL----------------------------YRQ 179
V P+A TYN R A+ + YRQ
Sbjct: 161 MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 220
Query: 180 MKE------DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
E + C PN TYN+L+ +D E+ ++ +Y ++
Sbjct: 221 AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 280
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
GLC ++W +A + EM+ + P + TF + L + +L+ +L +K+ + T
Sbjct: 281 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT 339
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 15/269 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +I G+C R A+R L +MIER + P+V+T+N L++ AS+ + F
Sbjct: 324 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS-----ASVKEGKLF 378
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AEK+ DEM R I PD +++ +++ + + ++ D M + P V T
Sbjct: 379 E-----AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR----FDDAKHMFDLMASPDVVT 429
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C R+++ +LL E+ R G+ + TYN + + N A L+++M
Sbjct: 430 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 489
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+C P+ T NIL+ F +++ E++ ++ S++ LD +Y ++IHG+C+ K
Sbjct: 490 SHGVC-PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 548
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA F + G+ P T+ + G
Sbjct: 549 DEAWDLFCSLPIHGVEPDVQTYNVMISGF 577
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 58/329 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLG----------EMIERGVEPNVVTYNVLLNGVCR 51
P+V + +L++G C +RI A G +M+E G+ P V+T+N L+NG+C
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLC- 232
Query: 52 RASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK 111
E + A + ++M +G+ DV ++ +++ + + +L+ L+ M+
Sbjct: 233 ---------LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 283
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
E I P V Y++++ LC G DA+ L EM+ G++P+ TYNC + +
Sbjct: 284 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 343
Query: 172 GAMKLYRQMKEDDL---------------------------------CV-PNIHTYNILI 197
A +L R M E ++ C+ P+ TYN +I
Sbjct: 344 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 403
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
F NR D + +++ + D+ ++ +I C ++ E Q E+ +GL+
Sbjct: 404 YGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 459
Query: 258 PQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
T+ TL G + D L + L +++
Sbjct: 460 ANTTTYNTLIHGFCEVDNLNAAQDLFQEM 488
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 136/327 (41%), Gaps = 45/327 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V + +LI G C R+ A + +M+ +G+ +VVTY ++NG+C+
Sbjct: 219 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD------- 271
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A + +M I+PDV +S ++ + + + M EKGI P V T
Sbjct: 272 ---TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 328
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
Y ++ CS GR DA+ LL +M+ ++P T+N A KL +M
Sbjct: 329 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 388
Query: 181 ----------------------KEDD-------LCVPNIHTYNILIGMFMALNRMDMVRE 211
+ DD + P++ T+N +I ++ R+D +
Sbjct: 389 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 448
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ + L + +Y LIHG CE A F EMI G+ P +T L G
Sbjct: 449 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 508
Query: 272 QSDMLRTWRRL-----KKKLDEESITF 293
+++ L L K+D +++ +
Sbjct: 509 ENEKLEEALELFEVIQMSKIDLDTVAY 535
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 122/268 (45%), Gaps = 1/268 (0%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ + LI +C +++ + G++ + G +P+VVT+N LL+G+C +
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ +FD+M G+ P V +F+ +++ + + +N M KG+ V TY
Sbjct: 200 GYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 259
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++V +C G + A LL +M + P Y+ + A L+ +M E
Sbjct: 260 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 319
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ PN+ TYN +I F + R + + + E+ D+ ++ LI ++ K
Sbjct: 320 KGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 378
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA + EM+ + + P VT+ ++ G
Sbjct: 379 EAEKLCDEMLHRCIFPDTVTYNSMIYGF 406
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + ++I +C+ R+D + L E+ RG+ N TYN L++G C +L+
Sbjct: 425 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA---- 480
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ +F EM G+ PD + +I+L+ + K + +L+ ++ I
Sbjct: 481 ------AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 534
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ +C ++++A +L + +GV P +TYN + G+ + A L+ +MK
Sbjct: 535 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 594
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
D+ P+ TYN LI + +D E+ + ++ + G D++T+
Sbjct: 595 -DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN--GFSGDAFTI 640
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 119/279 (42%), Gaps = 21/279 (7%)
Query: 14 WCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFD 73
+ ++NR D+A +M R + N+ ++N+L+ C L + F
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKL----------SFSLSTFG 165
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK----------GICPTVATYT 123
++ G +PDV +F+ +LH + +L +M E G+ P V T+
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFN 225
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
+++ LC GR+ +A L+ +MV G+ TY D A+ L +M+E
Sbjct: 226 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 285
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
+ P++ Y+ +I + +++ + + ++ +Y +I G C +W +
Sbjct: 286 HI-KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 344
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
A + +MIE+ + P +TF L ++ L +L
Sbjct: 345 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 383
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 107/243 (44%), Gaps = 16/243 (6%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A ++ +M +R I ++ SF+I++ + HK SL + + G P V T+ +++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 128 CLCSCGRIEDAEELLG----------EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
LC RI +A L G +MV G++P T+N A L
Sbjct: 185 GLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 244
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+M L + ++ TY ++ + + + ++ + + D+ Y+ +I LC+
Sbjct: 245 NKMVGKGLHI-DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 303
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRR-LKKKLDEESIT 292
+A F EM+EKG+ P T+ + G SD R R ++++++ + +T
Sbjct: 304 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 363
Query: 293 FGS 295
F +
Sbjct: 364 FNA 366
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 15/250 (6%)
Query: 28 GEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSF 87
G + E+G + V G L + K++ +A FD M VR P T+
Sbjct: 52 GRVAEKGTKSLPSLTQVTFEG--EELKLKSGSHYFKSLDDAIDFFDYM-VRS-RPFYTAV 107
Query: 88 SI--VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
V+ V+ R ++P +++ M+ + I + ++ ++KC C C ++ + G++
Sbjct: 108 DCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKL 167
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE-----DDLC----VPNIHTYNIL 196
+ G P T+N + A+ L+ M E D + P + T+N L
Sbjct: 168 TKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTL 227
Query: 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
I R+ + N + G L +D+ +Y +++G+C+ K A +M E +
Sbjct: 228 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 287
Query: 257 LPQKVTFETL 266
P V + +
Sbjct: 288 KPDVVIYSAI 297
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N +IG+F+ +NR D+ ++ ++ + L++ S+ +LI C+ K + F ++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 254 KGLLPQKVTFETLYRGLIQSD 274
G P VTF TL GL D
Sbjct: 170 LGFQPDVVTFNTLLHGLCLED 190
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 15/269 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +I G+C R A+R L +MIER + P+V+T+N L++ AS+ + F
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS-----ASVKEGKLF 383
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AEK+ DEM R I PD +++ +++ + + ++ D M + P V T
Sbjct: 384 E-----AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR----FDDAKHMFDLMASPDVVT 434
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C R+++ +LL E+ R G+ + TYN + + N A L+++M
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+C P+ T NIL+ F +++ E++ ++ S++ LD +Y ++IHG+C+ K
Sbjct: 495 SHGVC-PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA F + G+ P T+ + G
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 145/334 (43%), Gaps = 63/334 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLG---------------EMIERGVEPNVVTYNVLL 46
P+V + +L++G C +RI A G +M+E G+ P V+T+N L+
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233
Query: 47 NGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK 106
NG+C E + A + ++M +G+ DV ++ +++ + + +L+
Sbjct: 234 NGLC----------LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 107 LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRG 166
L+ M+E I P V Y++++ LC G DA+ L EM+ G++P+ TYNC +
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 167 RKDANGAMKLYRQMKEDDL---------------------------------CV-PNIHT 192
+ A +L R M E ++ C+ P+ T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
YN +I F NR D + +++ + D+ ++ +I C ++ E Q E+
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+GL+ T+ TL G + D L + L +++
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 136/327 (41%), Gaps = 45/327 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V + +LI G C R+ A + +M+ +G+ +VVTY ++NG+C+
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD------- 276
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A + +M I+PDV +S ++ + + + M EKGI P V T
Sbjct: 277 ---TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
Y ++ CS GR DA+ LL +M+ ++P T+N A KL +M
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 181 ----------------------KEDD-------LCVPNIHTYNILIGMFMALNRMDMVRE 211
+ DD + P++ T+N +I ++ R+D +
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ + L + +Y LIHG CE A F EMI G+ P +T L G
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 272 QSDMLRTWRRL-----KKKLDEESITF 293
+++ L L K+D +++ +
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAY 540
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 123/273 (45%), Gaps = 6/273 (2%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF- 61
N+ + LI +C +++ + G++ + G +P+VVT+N LL+G+C +
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 62 ----EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
E A +FD+M G+ P V +F+ +++ + + +N M KG+
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V TY ++V +C G + A LL +M + P Y+ + A L+
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+M E + PN+ TYN +I F + R + + + E+ D+ ++ LI +
Sbjct: 320 SEMLEKGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ K EA + EM+ + + P VT+ ++ G
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + ++I +C+ R+D + L E+ RG+ N TYN L++G C +L+
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA---- 485
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ +F EM G+ PD + +I+L+ + K + +L+ ++ I
Sbjct: 486 ------AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ +C ++++A +L + +GV P +TYN + G+ + A L+ +MK
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
D+ P+ TYN LI + +D E+ + ++ + G D++T+
Sbjct: 600 -DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN--GFSGDAFTI 645
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 119/284 (41%), Gaps = 26/284 (9%)
Query: 14 WCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFD 73
+ ++NR D+A +M R + N+ ++N+L+ C L + F
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKL----------SFSLSTFG 165
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK---------------GICPT 118
++ G +PDV +F+ +LH + +L +M E G+ P
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V T+ +++ LC GR+ +A L+ +MV G+ TY D A+ L
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M+E + P++ Y+ +I + +++ + + ++ +Y +I G C
Sbjct: 286 KMEETHI-KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+W +A + +MIE+ + P +TF L ++ L +L
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N +IG+F+ +NR D+ ++ ++ + L++ S+ +LI C+ K + F ++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 254 KGLLPQKVTFETLYRGLIQSD 274
G P VTF TL GL D
Sbjct: 170 LGFQPDVVTFNTLLHGLCLED 190
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 142/289 (49%), Gaps = 11/289 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI C R A R L +MIER + P+V T++ L++ +
Sbjct: 84 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK---------- 133
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK++DEM R I+P + ++S +++ + + + FM K P V T
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 193
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+E+ E+ EM + G+ + TYN + D + A +++++M
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + PNI TYN L+ +++ ++ +++ S++ + +Y ++I G+C+ K
Sbjct: 254 SDGV-PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 312
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
++ F + KG+ P V + T+ G + L K++ E+
Sbjct: 313 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 361
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 128/248 (51%), Gaps = 11/248 (4%)
Query: 26 FLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVT 85
+ M+ +G +P++VTY V++NG+C+R A + ++M +EP V
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL----------AFNLLNKMEQGKLEPGVL 52
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
++ ++ + +L+ M+ KGI P V TY+S++ CLC+ GR DA LL +M
Sbjct: 53 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 112
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+ ++P T++ + A KLY +M + + P+I TY+ LI F +R
Sbjct: 113 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI-DPSIVTYSSLINGFCMHDR 171
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+D ++++ + D+ +Y LI G C+ ++ +E + F EM ++GL+ VT+
Sbjct: 172 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 231
Query: 266 LYRGLIQS 273
L +GL Q+
Sbjct: 232 LIQGLFQA 239
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 136/275 (49%), Gaps = 11/275 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++ G CK D+A L +M + +EP V+ YN +++G+C+
Sbjct: 14 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY--------- 64
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + +A +F EM +GI P+V ++S ++ + + L+ M E+ I P V T
Sbjct: 65 -KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 123
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++++ G++ +AE+L EMV+ + PS TY+ + + A +++ M
Sbjct: 124 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 183
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P++ TYN LI F R++ E++ + L + +Y +LI GL +
Sbjct: 184 SKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
A + F EM+ G+ P +T+ TL GL ++ L
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 277
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y LI G + DMA+ EM+ GV PN++TYN LL+G+C+ N + E
Sbjct: 225 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK------NGKLE 278
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K A VF+ ++ +EP + +++I++ +A K + D + KG+ P V Y
Sbjct: 279 K----AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 334
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++ C G E+A+ L EM +G P++ YN + D + +L ++M+
Sbjct: 335 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 393
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 6/165 (3%)
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
L+ MV G P TY R D + A L +M++ L P + YN +I
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL-EPGVLIYNTIIDGL 61
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
MD ++ ++ + ++ +Y+ LI LC +W +A + +MIE+ + P
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121
Query: 261 VTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNY 300
TF L ++ L +L K+ +D +T+ S +
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 166
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G+C+ + A+ EM E G PN YN L+ RA L +R
Sbjct: 329 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI-----RARLRDGDR- 382
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
+ ++ EMR G D ++ +V ++ + LD L+
Sbjct: 383 ----EASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 425
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV--CRRASLHPNE 59
PN++ YT L+ GWC+I + A R EMI++G +P+++ ++ +L G+ C++ S
Sbjct: 370 PNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKS----- 424
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+A K+F+ M+ +G P+V +++I++ + K Q +++ + M + G P
Sbjct: 425 -------DAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDA 477
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
A YT ++ + +++ LL EM G TYN K R+ + A+++Y++
Sbjct: 478 AVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKK 537
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M ++ + +HTYN+++ + +M +W + D +SY + I GL
Sbjct: 538 MIQNGI-QSTLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKGCCPDDNSYIVFIGGLIRHG 596
Query: 240 KWKEACQYFVEMIEKGL-LPQ 259
+ +EAC+Y EMIEKG+ PQ
Sbjct: 597 RSEEACRYLEEMIEKGMKAPQ 617
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 10/180 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YT LI G+ ++D L EM E+G + TYN L+ + R
Sbjct: 475 PDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNR--------- 525
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A +++ +M GI+ + ++++++ Y ++ M KG CP +
Sbjct: 526 -QMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKGCCPDDNS 584
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + L GR E+A L EM+ G+ YN F ++ + +L R+MK
Sbjct: 585 YIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELARKMK 644
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 95/243 (39%), Gaps = 8/243 (3%)
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---KPQLSLDKLNFMKEKGICPTVATY 122
+ A VF+ M+ + V + + +L RA + Q +KL E P + TY
Sbjct: 320 KKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKL----EDRFTPNLRTY 375
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++ C + +A EM+ G P ++ + K + A+KL+ MK
Sbjct: 376 TVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKA 435
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
PN+ TY ILI +M E ++ + S D YT LI G ++K
Sbjct: 436 KGPS-PNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMD 494
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
+ EM EKG T+ L + + M R+ KK+ + I N
Sbjct: 495 KVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMM 554
Query: 303 KPY 305
K Y
Sbjct: 555 KSY 557
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 102/263 (38%), Gaps = 40/263 (15%)
Query: 59 ERFEKTIRNAEKVFD-EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
ERF+ + A + F + G + +++ ++ V R + + + L M EKG+
Sbjct: 243 ERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLL- 301
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T+ T++ +K + + A + M R +T NC K A L+
Sbjct: 302 TMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALF 361
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV--------------------- 216
++ +D PN+ TY +L+ + + + WN +
Sbjct: 362 EKL--EDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLK 419
Query: 217 --------------KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
K ++ +YT+LI LC++ K +EA +YF EM++ G P
Sbjct: 420 CKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAV 479
Query: 263 FETLYRGLI-QSDMLRTWRRLKK 284
+ L G Q M + + LK+
Sbjct: 480 YTCLITGFGNQKKMDKVYALLKE 502
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 136/294 (46%), Gaps = 11/294 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y LI+ C+ ++ A L +M+ RG P+VVTYN+LL C+
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKG--------- 55
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ R A ++ D MR G P+ ++++++ +L+ L + G P+
Sbjct: 56 -RGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVN 114
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V+K LCS R DA+EL+ EM+R P+ T+N + A++L +M
Sbjct: 115 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 174
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C NI TYN +I +D + + +K D+ +Y L+ GLC +W
Sbjct: 175 KHG-CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARW 233
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
+A + M + G LP VTF TL L Q ++ + K++ ++ T S
Sbjct: 234 VDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNS 287
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 128/273 (46%), Gaps = 14/273 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +++ G C R A+ + EM+ PN T+NV++ +CR+ L
Sbjct: 110 PSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLL------ 163
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++ ++M G ++ +++ +++ ++ L+ MK G P + T
Sbjct: 164 ----QQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVT 219
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K LCS R DAEEL+ M +NG P T+N + A+++++QM
Sbjct: 220 YNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMP 279
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS-YTMLIHGLCEKQK 240
D C PN TY+ +I ++D E++N + G + D Y +L L +
Sbjct: 280 -DKGCTPNSITYSTIISGLAKATKLDQALELFNEM--GHKGFNPDKIYQLLAECLNDDDT 336
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+EA Q ++ + G+ P V + + GL ++
Sbjct: 337 IEEAIQTVRKLQDSGISPHTVLYNAILLGLCRN 369
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + +LI C+ + A +M ++G PN +TY+ +++G+ + L
Sbjct: 249 LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD---- 304
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++F+EM +G PD + ++ + + ++ + +++ GI P
Sbjct: 305 ------QALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTV 357
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
Y +++ LC G+ E A +++ MV +G P TY
Sbjct: 358 LYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTY 394
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+++I G K ++D A EM +G P+ + Y +L L+ ++
Sbjct: 285 PNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLL------AECLNDDDTI 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ I+ K+ D GI P ++ +L R K + ++D + +M G P T
Sbjct: 338 EEAIQTVRKLQDS----GISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLT 393
Query: 122 YTSVVKCLCSCGRIEDAEELL 142
Y +++ L G + +A ELL
Sbjct: 394 YVILIEGLAYEGYLNEARELL 414
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 147/297 (49%), Gaps = 26/297 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----------- 51
+V Y++LIYG+C ++ A L EM+ + + PNV TYN+L++ +C+
Sbjct: 233 DVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL 292
Query: 52 ----RASLHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+A + P+ T ++ A+ VF+ M + G+ PDV +++I+++ + +
Sbjct: 293 AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+L+ M +K + P + TY+S++ LC GRI +L+ EM G TY
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITY 412
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
+ + A+ L+ +MK+ ++ PNI T+ IL+ R+ +E++ +
Sbjct: 413 SSLIDGLCKNGHLDRAIALFNKMKDQEI-RPNIFTFTILLDGLCKGGRLKDAQEVFQDLL 471
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
L++ +Y ++I+G C++ +EA +M + G +P TFET+ L + D
Sbjct: 472 TKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKD 528
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CKI A + L ++ R +PNV Y+ +++ +C+ + +
Sbjct: 167 YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKY----------QLVS 216
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +F EM V+GI DV ++S +++ + K + ++ LN M K I P V TY +V
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G++++A+ +L M++ V P TY+ Y + A ++ M +
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV- 335
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++HTY ILI F +D ++ + + + +Y+ LI GLC+ +
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWD 395
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM ++G +T+ +L GL ++ L L K+ ++ I
Sbjct: 396 LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 134/298 (44%), Gaps = 28/298 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ LI +C + +I L ++++RG P+ VT N L+ G+C + + F
Sbjct: 92 PDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHF 151
Query: 62 EKTI-------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ R A K+ ++ R +P+V +S ++ +
Sbjct: 152 HDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCK 211
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + M KGI V TY++++ C G++++A LL EMV ++P+ T
Sbjct: 212 YQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYT 271
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNH 215
YN A + M + CV P++ TY+ L+ + + + + ++N
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKA--CVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + D+ +YT+LI+G C+ + EA F EM +K ++P VT+ +L GL +S
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT LI G+CK +D A EM ++ + P +VTY+ L++G+C+
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR------- 389
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I + DEMR RG DV ++S ++ + ++ N MK++ I P + T
Sbjct: 390 ---IPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFT 446
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T ++ LC GR++DA+E+ +++ G + TYN + + A+ + +M
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKM- 505
Query: 182 EDDLCVPNIHTY-NILIGMF 200
ED+ C+PN T+ I+I +F
Sbjct: 506 EDNGCIPNAFTFETIIIALF 525
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + Y+SLI G CK RI + EM +RG +V+TY+ L++G+C+ L
Sbjct: 371 VPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD---- 426
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +F++M+ + I P++ +F+I+L + + + + + + KG V
Sbjct: 427 ------RAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVY 480
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ C G +E+A +L +M NG P+A T+ + + + A KL RQM
Sbjct: 481 TYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 117/294 (39%), Gaps = 51/294 (17%)
Query: 52 RASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK 111
+ H + + +A F+ M P + F+ +L +++ ++ + ++
Sbjct: 27 HSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLE 86
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE--YRGR-- 167
KGI P + T ++ C C G+I +L ++++ G P T N K +G+
Sbjct: 87 LKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVK 146
Query: 168 -------------------------------KDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
D GA+KL R++ + L PN+ Y+ +
Sbjct: 147 KALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKI-DGRLTKPNVEMYSTI 205
Query: 197 IGMFMALNRMDMVREIWN-----HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251
I AL + +V E + VKG + D+ +Y+ LI+G C + K KEA EM
Sbjct: 206 ID---ALCKYQLVSEAYGLFSEMTVKG--ISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260
Query: 252 IEKGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGSEFQNY 300
+ K + P T+ L L + ++ + LK + + IT+ + Y
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 147/294 (50%), Gaps = 17/294 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN YTSL+ G CK R+D A L EM+ +G+ PNVVTY V+++G+C+
Sbjct: 336 MPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCK--------- 386
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A+ V M G++ + ++ ++H + + +LD LN MK KG+ V+
Sbjct: 387 -EGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVS 445
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ LC ++++A+ LL +M G+ P+ Y + + A+ L ++
Sbjct: 446 LYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKI 505
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV-KGSELGLD--LDSYTMLIHGLCE 237
+ L PN+ TY LI L + + E +H K ELGLD + YT LI G C+
Sbjct: 506 PDSGL-QPNVVTYCALID---GLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCK 561
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+A EM++KG+ KV + +L G ++ L+ LK K+ E +
Sbjct: 562 IGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGL 615
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 15/274 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y SLI G+ K ++ E + EM + G +VVTYN L+N C F
Sbjct: 232 PDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALIN--C----------F 279
Query: 62 EKT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
K I A F EM+ G+ +V + S + + + + ++ M+ +G+ P
Sbjct: 280 SKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNE 339
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYTS+V C GR++DA LL EMV G+ P+ TY A +
Sbjct: 340 FTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSL 399
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ + + ++ G FM N + ++ N +K + LD+ Y LI GLC+ Q
Sbjct: 400 MERAGVKANELLYTTLIHGHFMNKNS-ERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQ 458
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
K EA +M + GL P V + T+ ++
Sbjct: 459 KLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKA 492
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 130/271 (47%), Gaps = 11/271 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +LI + K I+ A + GEM GV NVVT + ++ C+ E
Sbjct: 268 DVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK----------E 317
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+R A K+F +MRVRG+ P+ +++ ++ +A + ++ L+ M +G+ P V TY
Sbjct: 318 GLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 377
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T +V LC G++ A+++L M R GV + Y + K++ A+ L +MK
Sbjct: 378 TVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKN 437
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ + ++ Y LI + ++D + + + + L + YT ++ + K
Sbjct: 438 KGMEL-DVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKES 496
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA ++ + GL P VT+ L GL ++
Sbjct: 497 EAVALLHKIPDSGLQPNVVTYCALIDGLCKA 527
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 11/233 (4%)
Query: 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PNV T+N++++ +C++ L A +F M+ G PDV +++ ++ Y +
Sbjct: 197 PNVFTFNIVIDFLCKQGEL----------VEARALFVRMKAMGCSPDVVTYNSLIDGYGK 246
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + ++ M++ G V TY +++ C G IE A GEM R GV + T
Sbjct: 247 CGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVT 306
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+ F + AMKL+ QM+ + +PN TY L+ R+D + + +
Sbjct: 307 LSTFVDAFCKEGLVREAMKLFAQMRVRGM-MPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 365
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
L ++ +YT+++ GLC++ K A M G+ ++ + TL G
Sbjct: 366 VHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHG 418
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 45/216 (20%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +YT+++ + K + A L ++ + G++PNVVTY L++G+C+ S++
Sbjct: 477 PNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIY----- 531
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVT-------------SFSIVLHVYSRAHKPQLSLDKLN 108
A FD+MR G++P+V S S +H+ + +SLDK+
Sbjct: 532 -----EAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVV 586
Query: 109 F----------------------MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
+ M E G+ + YT + C+ +++A +L EM+
Sbjct: 587 YTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI 646
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
G++P YNC ++Y+ + A L +M+
Sbjct: 647 GTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 1/160 (0%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P V T+ V+ LC G + +A L M G SP TYN Y + L
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+M++ C ++ TYN LI F ++ + +K + ++ + + + C
Sbjct: 257 VSEMRKSG-CAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFC 315
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
++ +EA + F +M +G++P + T+ +L G ++ L
Sbjct: 316 KEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRL 355
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
+P+ T+N + + A L+ +MK C P++ TYN LI + ++ V
Sbjct: 196 APNVFTFNIVIDFLCKQGELVEARALFVRMKAMG-CSPDVVTYNSLIDGYGKCGELEEVE 254
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + ++ S D+ +Y LI+ + ++A YF EM G++ VT T
Sbjct: 255 LLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAF 314
Query: 271 IQSDMLRTWRRL 282
+ ++R +L
Sbjct: 315 CKEGLVREAMKL 326
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 143/275 (52%), Gaps = 11/275 (4%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
L+ +C+ +++ +A FLG+M++ G EP++VT+ LLNG CR ++ +A
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY----------DAL 171
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+FD M G EP+V ++ ++ ++ + +LD LN M+ GI P TY S++ L
Sbjct: 172 YMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGL 231
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C+ GR +DA ++ M + + P T+N + A +LY +M L P+
Sbjct: 232 CNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSL-DPD 290
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
I TY++LI +R+D +++ + D+ +Y++LI+G C+ +K + + F
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
EM ++G++ VT+ L +G ++ L + K
Sbjct: 351 EMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFK 385
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 147/320 (45%), Gaps = 36/320 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y ++I G CK ++D A L M G+ P+ VTYN L++G+C R
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRM 243
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH---V 93
E I AE++++EM R ++PD+ ++S++++ +
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
YSR + + FM KG P V TY+ ++ C ++E +L EM + GV +
Sbjct: 304 YSRLDEAE---QMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC--VPNIHTYNILIGMFMALNRMDMVRE 211
TY + Y N A ++++ M C PNI TYN+L+ +++
Sbjct: 361 TVTYTVLIQGYCRAGKLNVAEEIFKWMV---FCGVPPNIITYNVLLHGLCDNGKIEKALV 417
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
I ++ S + D+ +Y ++I G+C+ + +A + + KGL P T+ + GL
Sbjct: 418 ILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLY 477
Query: 272 QSDMLRTWRRLKKKLDEESI 291
+ + L +K+ E+ I
Sbjct: 478 KKGLRGEADALFRKMKEDGI 497
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 141/305 (46%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ ++ L+ K+ + D+ +M G+ N+ T N+LLN CR + L
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F +M G EPD+ +F +L+ + R + +L + M E G P V
Sbjct: 138 F----------LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVV 187
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ LC ++++A +LL M +G+ P A TYN + A ++ M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCM 247
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ ++ P++ T+N LI + R+ E++ + L D+ +Y++LI+GLC +
Sbjct: 248 TKREI-YPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
EA Q F M+ KG P VT+ L G +S + +L ++ + ++T+
Sbjct: 307 LDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTV 366
Query: 296 EFQNY 300
Q Y
Sbjct: 367 LIQGY 371
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 131/260 (50%), Gaps = 13/260 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + +LI K RI AE EMI R ++P++VTY++L+ G+C + L
Sbjct: 254 PDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD----- 308
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE++F M +G PDV ++SI+++ Y ++ K + + M ++G+ T
Sbjct: 309 -----EAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ C G++ AEE+ MV GV P+ TYN A+ + M+
Sbjct: 364 YTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + +I TYNI+I GM A D +++ + L D+ +YT ++ GL +K
Sbjct: 424 KSGM-DADIVTYNIIIRGMCKAGEVAD-AWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGL 481
Query: 241 WKEACQYFVEMIEKGLLPQK 260
EA F +M E G+LP +
Sbjct: 482 RGEADALFRKMKEDGILPNE 501
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 46/297 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +Y SL+ G C+ I A + + EM+E G P++ TYN+++NG+C+ +
Sbjct: 383 PDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGN------- 435
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I +A V ++ V+G PDV +F+ ++ Y + K +L + M GI P V T
Sbjct: 436 ---ISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVIT 492
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF---------FKEYRG------ 166
Y SV+ LC G+ ++ E EM+ G P+A TYN +E G
Sbjct: 493 YNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMC 552
Query: 167 --------------------RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
D +GA L++++ E T+NILIG + + M
Sbjct: 553 QDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSA-TADTFNILIGAYSSKLNM 611
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
M +I+ + DL +Y +L+ GLC+ A + EMI KG +P TF
Sbjct: 612 QMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATF 668
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 146/329 (44%), Gaps = 26/329 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +L+ G CK +++ A ++LG M+ +G P+ TYN +++G C+ L
Sbjct: 278 PDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATEL 337
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E I A ++F+E + + ++PD+ ++ ++ R
Sbjct: 338 LKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCR 397
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L +N M E+G P + TY ++ LC G I DA ++ + + G P T
Sbjct: 398 QGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 457
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N Y R + A++L +M + P++ TYN ++ + V E + +
Sbjct: 458 FNTLIDGYCKRLKLDSALQLVERMWTYGI-APDVITYNSVLNGLCKAGKAKEVNETFEEM 516
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ +Y +LI C+ + +EA V M + GL+P V+F TL G ++ L
Sbjct: 517 ILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDL 576
Query: 277 RTWRRLKKKLDEESITFGSEFQNYHFKPY 305
L +KLDE+ + ++ N Y
Sbjct: 577 DGAYLLFQKLDEKGYSATADTFNILIGAY 605
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 12/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + ++++ C+ + + L ++++RG+ N T N+ + G+C + R
Sbjct: 209 PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCE------DGRL 262
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + E++ + PDV +++ ++ + K Q + L M +G P T
Sbjct: 263 EEAVALVERMGAY-----VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFT 317
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C G +++A ELL + V G P TY D A++L+ + +
Sbjct: 318 YNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQ 377
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
DL P++ YN L+ + ++ N + D+ +Y ++I+GLC+
Sbjct: 378 AKDL-KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNI 436
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
+A + I KG LP TF TL G
Sbjct: 437 SDAAVVMNDAIVKGYLPDVFTFNTLIDG 464
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 12/279 (4%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y + I + + R+ A M P YN +++ + A+ H
Sbjct: 73 LYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVN-AAYH--------- 122
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
A KV+ M G+ PD + ++ L + +P ++L L + E+G A Y +V
Sbjct: 123 DQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTV 182
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
V+ L + G +A L EM+ V P T+N + D + L ++ + +
Sbjct: 183 VRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGM 242
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
N T NI I R++ + + G+ + D+ +Y L+ GLC+ K +EA
Sbjct: 243 SA-NKFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAA 300
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
QY M+ +G +P T+ T+ G +S ML+ L K
Sbjct: 301 QYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLK 339
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
PN Y LI +CKIN+++ A + M + G+ P+ V++N L++G CR L
Sbjct: 523 PNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLL 582
Query: 61 FEK------------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F+K ++ AEK+F EM +G +PD+ ++ I++ +
Sbjct: 583 FQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCK 642
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
A + L M KG P++AT+ ++ L R+ +A ++ MVR GV P
Sbjct: 643 AANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVP 698
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 135/265 (50%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+S+I CK +D A L M++ GV PN +TYN +L+G C +S P E
Sbjct: 229 PDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYC--SSEQPKE-- 284
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +MR G+EPDV +++ ++ + + + + M ++G+ P +AT
Sbjct: 285 ------AIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIAT 338
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ + G + + LL MVRNG+ P +N Y ++ + AM ++ +M+
Sbjct: 339 YCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMR 398
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L PN+ TY +IG+ +D + + L ++ YT LIH LC KW
Sbjct: 399 QHGL-NPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKW 457
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+A + +EM+++G+ + F ++
Sbjct: 458 DKAEELILEMLDRGICLNTIFFNSI 482
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 145/298 (48%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ +YTSLI+ C ++ D AE + EM++RG+ N + +N +++ C+
Sbjct: 439 PNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCK---------- 488
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +EK+FD M G++P+V ++S ++ Y A K + L+ M G+ P T
Sbjct: 489 EGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVT 548
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R++DA L EMV +GVSP+ TYN + + A +LY +
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGIT 608
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + TYNI++ N D ++ ++ ++L L+ ++ ++I L + +
Sbjct: 609 KSGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 667
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
EA F + GL+P T+ + LI+ +L L ++E T S N
Sbjct: 668 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 725
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 132/269 (49%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G+ K D A EM++R + P+VVTY+ ++ +C+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCK---------- 243
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A +V M G+ P+ +++ +LH Y + +P+ ++ L M+ G+ P V T
Sbjct: 244 GQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR +A ++ M + G+ P TY + Y K A M +
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY-ATKGALVEMHALLDLM 362
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ H +NILI + ++D +++ ++ L ++ +Y +I LC+
Sbjct: 363 VRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSV 422
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+A YF +MI++GL P + + +L L
Sbjct: 423 DDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 147/348 (42%), Gaps = 91/348 (26%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN Y S+++G+C + A FL +M GVEP+VVTYN L++ +C+ N R
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCK------NGR 316
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTS---------------------------------- 86
+ A K+FD M RG+EPD+ +
Sbjct: 317 STE----ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHH 372
Query: 87 -FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
F+I++ Y++ K ++ + M++ G+ P V TY +V+ LC G ++DA +M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432
Query: 146 VRNGVSPSAETYN------CFFKEYRGRKDANGAMKLYRQMKEDDLCV------------ 187
+ G++P+ Y C F ++ + A +L +M + +C+
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKW------DKAEELILEMLDRGICLNTIFFNSIIHSH 486
Query: 188 ----------------------PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL 225
PN+ TY+ LI + +MD ++ + + + D
Sbjct: 487 CKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDC 546
Query: 226 DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+Y LI+G C + +A F EM+ G+ P +T+ + +GL +
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 594
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 139/333 (41%), Gaps = 43/333 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RRAS----- 54
P V Y LI C+ R+D+ LG ++++G +T+ LL G+C +R S
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 55 -----------------------LHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
L R ++ + + D+ R G PDV S++ V+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD-RGGGSAPDVVSYTTVI 203
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ + + + + M ++ I P V TY+S++ LC ++ A E+L MV+NGV
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVM 263
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P+ TYN Y + A+ ++M+ D + P++ TYN L+ R R+
Sbjct: 264 PNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGV-EPDVVTYNSLMDYLCKNGRSTEARK 322
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
I++ + L D+ +Y L+ G K E M+ G+ P F L
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382
Query: 272 QSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
+ ++K+DE + F S+ + + P
Sbjct: 383 K----------QEKVDEAMLVF-SKMRQHGLNP 404
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
+A VF+E+ RG + + L +R H P ++ + N M G + PTV TY
Sbjct: 33 DARHVFEELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYG 91
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C C GR++ LG +V+ G A T+ K K + AM + + +
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV---KGSELGLDLDSYTMLIHGLCEKQK 240
C+P++ + IL+ NR E+ + + +G D+ SYT +I+G ++
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+A + EM+++ + P VT+ ++ L
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAAL 241
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 122/282 (43%), Gaps = 28/282 (9%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V P V TY +L+ CR L + + N K +G + +F+ +L
Sbjct: 83 VTPTVHTYGILIGCCCRAGRL---DLGFAALGNVVK-------KGFRVEAITFTPLLKGL 132
Query: 95 SRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN---GV 150
+ ++D L M E P V + T ++K LC R ++A ELL M + G
Sbjct: 133 CADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGS 192
Query: 151 SPSAETY----NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+P +Y N FFKE D++ A Y +M D P++ TY+ +I M
Sbjct: 193 APDVVSYTTVINGFFKE----GDSDKAYSTYHEML-DRRISPDVVTYSSIIAALCKGQAM 247
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D E+ + + + + +Y ++HG C ++ KEA + +M G+ P VT+ +L
Sbjct: 248 DKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSL 307
Query: 267 YRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNYHFK 303
L ++ R++ K+ L+ + T+ + Q Y K
Sbjct: 308 MDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATK 349
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 25/193 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV--CRRASL---- 55
P+ Y +LI G+C+++R+D A EM+ GV PN++TYN++L G+ RR +
Sbjct: 544 PDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 603
Query: 56 -----HPNERFEKTIRN--------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ E + N A ++F + + ++ + +F+I++ +
Sbjct: 604 YVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 663
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D + G+ P V TY+ + + L G +E+ ++L M NG + ++
Sbjct: 664 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRM 723
Query: 157 YNCFFKEYRGRKD 169
N ++ R D
Sbjct: 724 LNSIVRKLLQRGD 736
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 140/288 (48%), Gaps = 15/288 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y SLIYG C + A EM+E ++P+VVT+++L++ +C+
Sbjct: 277 PTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCK---------- 326
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A VF +M +EPD+ ++S ++H ++ + S LN M + I P V T
Sbjct: 327 EGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVT 386
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ V C G + +A+ ++ M+ G+ P+ TYN Y + A K++ M
Sbjct: 387 FSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMV 446
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P++ +YNILI + R+D +++++ + L + ++T LI GLC+ +
Sbjct: 447 NKG-CAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRP 505
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK 285
A + F +M G P +T+ TL G + + L + LKK
Sbjct: 506 YAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKS 553
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V ++ L+ CK + A G+MI+ +EP++VTY+ L++GVC+ +
Sbjct: 312 PDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSS-------- 363
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + + +EM R I PDV +FSI + V+ + + +N M E+G+ P V T
Sbjct: 364 --LWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVT 421
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C ++++A ++ MV G +P +YN K Y + + A +L+ +M
Sbjct: 422 YNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMS 481
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L PN T+ LI R +E++ + DL +Y+ L+ G C+
Sbjct: 482 HKGL-TPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHL 540
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EA F + + L P V + L G+ ++ L + L L E +
Sbjct: 541 DEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEEL 590
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 145/310 (46%), Gaps = 26/310 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
P V +T ++ G CKI + A ++ +M+E EP VV+Y+++++ +C
Sbjct: 207 PTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDL 266
Query: 51 ----RRASLHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R + P ++ + A +F EM ++PDV +FSI++ +
Sbjct: 267 FYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCK 326
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L M + + P + TY+S++ +C +++ LL EM+ + P T
Sbjct: 327 EGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVT 386
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
++ + + + + A + M E L PN+ TYN L+ + ++MD R++++ +
Sbjct: 387 FSIWVDVFCKKGMVSEAQSIINLMIERGL-RPNVVTYNSLMDGYCLHSQMDEARKVFDIM 445
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
D+ SY +LI G C+ ++ EA Q F EM KGL P +T TL GL Q+
Sbjct: 446 VNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRP 505
Query: 277 RTWRRLKKKL 286
+ L KK+
Sbjct: 506 YAAKELFKKM 515
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 127/257 (49%), Gaps = 11/257 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y+SLI+G CK + + L EM+ R + P+VVT+++ ++ C++
Sbjct: 347 PDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKG-------- 398
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+ + + M RG+ P+V +++ ++ Y + + + M KG P V +
Sbjct: 399 --MVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLS 456
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++K C RI++A++L EM G++P++ T+ A +L+++M
Sbjct: 457 YNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMG 516
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P++ TY+ L+ F +D ++ +K S+L + +L+ G+C+ K
Sbjct: 517 SHG-CPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKL 575
Query: 242 KEACQYFVEMIEKGLLP 258
++A + F + + L P
Sbjct: 576 EDAKELFSSLSIEELQP 592
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 130/265 (49%), Gaps = 17/265 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V T LI C ++ + + LG++ + G +P+++T+N L+NG+C E
Sbjct: 138 SVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLC----------IE 187
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I A + D + RG +P V + +++++ + K ++ + M E P V +Y
Sbjct: 188 GRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSY 247
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ ++ LC + +A +L M G+SP+ TYN A L+++M E
Sbjct: 248 SIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLE 307
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVRE---IWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
++ P++ T++IL+ AL + +V E ++ + + D+ +Y+ LIHG+C+
Sbjct: 308 WNM-KPDVVTFSILVD---ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSS 363
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFE 264
WKE+ EM+ + + P VTF
Sbjct: 364 LWKESSTLLNEMLSRNIRPDVVTFS 388
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 122/268 (45%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + +LI G C RI A L ++ RG +P V T+ +++NG+C+ +
Sbjct: 172 PSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVW 231
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K +M EP+V S+SI++ + ++D M+ GI PTV T
Sbjct: 232 MK----------KMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVT 281
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ +C+ G+ + A L EM+ + P T++ A+ ++ +M
Sbjct: 282 YNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMI 341
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TY+ LI + + N + + D+ ++++ + C+K
Sbjct: 342 QIAM-EPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMV 400
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA MIE+GL P VT+ +L G
Sbjct: 401 SEAQSIINLMIERGLRPNVVTYNSLMDG 428
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 112/253 (44%), Gaps = 11/253 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
+ D A + +M+ P + +N LL + R K + ++ +M
Sbjct: 83 SNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRM----------KHYDSVVSIYRKMEF 132
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
G+ V + +I+++ H L L + + G P++ T+ +++ LC GRI +
Sbjct: 133 FGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVE 192
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A E L ++ G P+ T+ + A+ ++M E D C P + +Y+I+I
Sbjct: 193 AMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELD-CEPEVVSYSIII 251
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
++ +++ H++ + + +Y LI+G+C +WK+A F EM+E +
Sbjct: 252 DSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMK 311
Query: 258 PQKVTFETLYRGL 270
P VTF L L
Sbjct: 312 PDVVTFSILVDAL 324
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 131/257 (50%), Gaps = 11/257 (4%)
Query: 14 WCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFD 73
+C+ ++ +A FLG++++ G EP++ T+ L+NG C I A + +
Sbjct: 116 FCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFC----------LGNRIEEAMSMVN 165
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
+M GI+PDV ++ ++ + +L N M+ GI P V YTS+V LC+ G
Sbjct: 166 QMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSG 225
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
R DA+ LL M++ + P T+N + A +LY +M + + PNI TY
Sbjct: 226 RWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSI-APNIFTY 284
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
LI R+D R+++ ++ D+ +YT LI+G C+ +K ++A + F EM +
Sbjct: 285 TSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQ 344
Query: 254 KGLLPQKVTFETLYRGL 270
KGL +T+ TL +G
Sbjct: 345 KGLTGNTITYTTLIQGF 361
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 148/293 (50%), Gaps = 12/293 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + +LI + K ++ A+ EMI+ + PN+ TY L+NG+C
Sbjct: 244 PDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLC----------M 293
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A ++F M +G PDV +++ +++ + + K + ++ M +KG+ T
Sbjct: 294 EGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTIT 353
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
YT++++ G+ A+E+ G MV GV P+ TYN N A+ ++ M
Sbjct: 354 YTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQ 413
Query: 181 -KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+E D PNI TYN+L+ +++ ++ ++ ++ + + +YT++I G+C+
Sbjct: 414 KREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAG 473
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
K K+A F + KG+ P VT+ T+ GL + ++ L +K+ E+ ++
Sbjct: 474 KVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 140/317 (44%), Gaps = 49/317 (15%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82
A M+E P+++ + LLN + + ++F+ I + +++ G+
Sbjct: 55 ALDLFSHMVESRPLPSIIDFTRLLNVIAKM------KKFDVVI----NLCKHLQIMGVSN 104
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
D+ + +++++ + ++ +P L+ L + + G P + T+TS++ C RIE+A ++
Sbjct: 105 DLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMV 164
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM---------------------- 180
+MV G+ P Y + A+ L+ QM
Sbjct: 165 NQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNS 224
Query: 181 ---KEDDLCV---------PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
++ DL + P++ T+N LI F+ ++ +E++N + + ++ +Y
Sbjct: 225 GRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTY 284
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKK 284
T LI+GLC + + EA Q F M KG P V + +L G + D ++ + + +
Sbjct: 285 TSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQ 344
Query: 285 K-LDEESITFGSEFQNY 300
K L +IT+ + Q +
Sbjct: 345 KGLTGNTITYTTLIQGF 361
>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 574
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 136/274 (49%), Gaps = 14/274 (5%)
Query: 2 PNVKMYTSLIYGWCK---INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
P+V Y +LI G+CK + ++ + L EMI+ G+ P+VVT+NVL+NG C+
Sbjct: 221 PSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLINGYCK------- 273
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
E I A KVF EMR +GI +V +++ ++ R K + S+ + M+E G+
Sbjct: 274 ---EPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACI 330
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
++T SV+ C G + +AE + + + G+ P+ TYN YR R +
Sbjct: 331 LSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYR-RLGKMKEAAAAK 389
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
PN+ TYN LI F V + + +K + D+ +Y +LI LC K
Sbjct: 390 DAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCK 449
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ ++A + EM+E GL P+ V + T+ G +
Sbjct: 450 GEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCE 483
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 46/264 (17%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
S++ G+CK + AE ++ + +RG++PNV+TYN L++G R ++ A
Sbjct: 336 SVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGY----------RRLGKMKEA 385
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
D M +GI P+V +++ ++ ++ + + L+ MKEKG+ V TY ++
Sbjct: 386 AAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGA 445
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC G + A +LL EMV G+ P YN + + DA GA ++ +M E
Sbjct: 446 LCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRM-EKRKKRA 504
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
N+ TYN+ + F + +MD + N
Sbjct: 505 NVVTYNVFLKYFCKMGKMDEANVVLN---------------------------------- 530
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQ 272
EM+EKGL+P ++T+E + G+I+
Sbjct: 531 -EMLEKGLVPNRITYEIINSGMIE 553
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 45/182 (24%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNVK Y LI G+ L EM E+GV+ +VVTYNVL+ +C +
Sbjct: 399 PNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGE------- 451
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR------AHKPQLSLDK--------- 106
+R A K+ DEM G+EP +++ +++ + AH+ +L ++K
Sbjct: 452 ---VRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVT 508
Query: 107 --------------------LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
LN M EKG+ P TY + + G + D ++
Sbjct: 509 YNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDISGYAADVS 568
Query: 147 RN 148
+N
Sbjct: 569 KN 570
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ---KWKEA 244
P++ T+NI+I F ++ ++ ++ + + +Y LI G C++ K
Sbjct: 186 PDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHV 245
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EMI+ G+ P VTF L G + + ++ +++ ++ I
Sbjct: 246 DALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGI 292
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 143/287 (49%), Gaps = 15/287 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +I G+C R A+R L +MIER + P+V+T+N L++ AS+ + F
Sbjct: 113 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS-----ASVKEGKLF 167
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AEK+ DEM R I PD +++ +++ + + ++ D M + P V T
Sbjct: 168 E-----AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR----FDDAKHMFDLMASPDVVT 218
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C R+++ +LL E+ R G+ + TYN + + N A L+++M
Sbjct: 219 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 278
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+C P+ T NIL+ F +++ E++ ++ S++ LD +Y ++IHG+C+ K
Sbjct: 279 SHGVC-PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 337
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
EA F + G+ P T+ + G + L K+ +
Sbjct: 338 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 384
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 134/327 (40%), Gaps = 45/327 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V + +LI G C R+ A + +M+ +G+ +VVTY ++NG+C+
Sbjct: 8 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD------- 60
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A + +M I+PDV +S ++ + + + M EKGI P V T
Sbjct: 61 ---TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 117
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ CS GR DA+ LL +M+ ++P T+N A KL +M
Sbjct: 118 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 177
Query: 182 E------------------------------DDLCVPNIHTYNILIGMFMALNRMDMVRE 211
D + P++ T+N +I ++ R+D +
Sbjct: 178 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 237
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ + L + +Y LIHG CE A F EMI G+ P +T L G
Sbjct: 238 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 297
Query: 272 QSDMLRTWRRL-----KKKLDEESITF 293
+++ L L K+D +++ +
Sbjct: 298 ENEKLEEALELFEVIQMSKIDLDTVAY 324
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 129/291 (44%), Gaps = 48/291 (16%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M+E G+ P V+T+N L+NG+C E + A + ++M +G+ DV ++
Sbjct: 1 MVEIGLTPVVITFNTLINGLC----------LEGRVLEAAALVNKMVGKGLHIDVVTYGT 50
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+++ + + +L+ L+ M+E I P V Y++++ LC G DA+ L EM+ G
Sbjct: 51 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 110
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL------------------------ 185
++P+ TYNC + + A +L R M E ++
Sbjct: 111 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 170
Query: 186 ---------CV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
C+ P+ TYN +I F NR D + +++ + D+ ++ +I
Sbjct: 171 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVY 226
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
C ++ E Q E+ +GL+ T+ TL G + D L + L +++
Sbjct: 227 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 277
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + ++I +C+ R+D + L E+ RG+ N TYN L++G C +L+
Sbjct: 214 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA---- 269
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ +F EM G+ PD + +I+L+ + K + +L+ ++ I
Sbjct: 270 ------AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 323
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ +C ++++A +L + +GV P +TYN + G+ + A L+ +MK
Sbjct: 324 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 383
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
D+ P+ TYN LI + +D E+ + ++ + G D++T+
Sbjct: 384 -DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN--GFSGDAFTI 429
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 41/191 (21%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M E G+ P V T+ +++ LC GR+ +A L+ +MV G+ TY D
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A+ L +M+E H+K D+ Y+
Sbjct: 61 TKSALNLLSKMEE-------------------------------THIKP-----DVVIYS 84
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRL-KK 284
+I LC+ +A F EM+EKG+ P T+ + G SD R R + ++
Sbjct: 85 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 144
Query: 285 KLDEESITFGS 295
+++ + +TF +
Sbjct: 145 EINPDVLTFNA 155
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 139/272 (51%), Gaps = 15/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + Y LI G+CKI +++ AE L +M RGV N + +N +++G CR+
Sbjct: 270 PNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQG-------- 321
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ NA KV M GIE DV +++ + R ++ + L+ M EKG+ P T
Sbjct: 322 --MVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVT 379
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G + +A L EM G PS TYN Y + A + ++M+
Sbjct: 380 YTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEME 439
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L VP+++TY L+ ++D+ +++ +K ++ +YT LI GL ++ +
Sbjct: 440 KKGL-VPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRS 498
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+EA Q + +M++ GL P ++LY L+ S
Sbjct: 499 EEAFQLYDDMLKAGLTPD----DSLYSALVGS 526
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 139/308 (45%), Gaps = 26/308 (8%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS---------LHPNER 60
++ G+CK R+D A L EM GV N + YN LL+ RR + N
Sbjct: 138 VVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGG 197
Query: 61 FEKT----------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL 104
E T I E V DEM+ + + DV ++ V++ Y RA + +
Sbjct: 198 IEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRAS 257
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
+ + GI P TY ++ C G++E AE LL +M GV + +N Y
Sbjct: 258 EVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGY 317
Query: 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
+ + A+K+ M++ + + +++TYN L +NRM + + + + + +
Sbjct: 318 CRQGMVDNALKVKAAMEKMGIEL-DVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPN 376
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
+YT LI C++ EA + F EM KG +P VT+ + G I+ +R R +K
Sbjct: 377 YVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRK 436
Query: 285 KLDEESIT 292
+++++ +
Sbjct: 437 EMEKKGLV 444
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V Y ++ G+ K I AERF EM ++G+ P+V TY L++G C
Sbjct: 409 MPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHC---------- 458
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K+F+EM+ RG EP+V +++ ++ ++ + + + + M + G+ P +
Sbjct: 459 VNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDS 518
Query: 121 TYTSVVKCL 129
Y+++V L
Sbjct: 519 LYSALVGSL 527
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 132/269 (49%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + SL++G+C +NRI A + M++ G EPNVV YN L++G+C+ L+
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNI---- 194
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ +EM +G+ DV +++ +L + + + L M ++ I P V T
Sbjct: 195 ------ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ G +++A+EL EM+++ V P+ TYN A K + M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN+ TYN LI F +D +++ + D+ +Y LIHG C+ K
Sbjct: 309 SKG-CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ A F M+ + + P +T L GL
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGL 396
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 154/339 (45%), Gaps = 46/339 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y +LI G CK +++A L EM ++G+ +VVTYN LL G+C +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC----------Y 223
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ +M R I PDV +F+ ++ V+ + + + M + + P T
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR+ DA++ M G P+ TYN + + + MKL+++M
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIW---------------------------- 213
+ +I TYN LI + + ++ + +I+
Sbjct: 344 CEGF-NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 214 -------NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ SE + + +Y ++IHGLC+ K ++A + F + +G+ P T+ +
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPY 305
GL ++ R L +++ EE I ++ H + +
Sbjct: 463 ILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEH 501
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 146/315 (46%), Gaps = 26/315 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------- 51
+PNV +Y ++I G CK ++ A M ++G+ + VTYN L++G+
Sbjct: 706 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 765
Query: 52 ------RASLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ + PN F E + A ++ EM R + P+V +++ +++ +
Sbjct: 766 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 825
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + M KG P V TY +++ C R+ED +L EM G+ A
Sbjct: 826 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 885
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN Y N A K++ +M + + P+I TYNIL+ +++ +
Sbjct: 886 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS-PDIVTYNILLDCLCNNGKIEKALVMVED 944
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
++ SE+ +D+ +Y ++I GLC K KEA F + KG+ P + + T+ GL + +
Sbjct: 945 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 1004
Query: 276 LRTWRRLKKKLDEES 290
R +L +++ E+
Sbjct: 1005 QREADKLCRRMKEDG 1019
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 17/270 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+LI + K + A EMI R V PNV TYN L+NG C L
Sbjct: 777 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG----- 831
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A+ +FD M +G PDV +++ ++ + ++ + + + M +G+ T
Sbjct: 832 -----DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 886
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C G++ A+++ MV GVSP TYN A+ + ++
Sbjct: 887 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 946
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG-SELGLDLDS--YTMLIHGLCEK 238
+ ++ V +I TYNI+I L R D ++E W + + G+ D+ Y +I GLC K
Sbjct: 947 KSEMDV-DIITYNIII---QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 1002
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+EA + M E G +P + ++ R
Sbjct: 1003 GLQREADKLCRRMKEDGFMPSERIYDETLR 1032
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 138/280 (49%), Gaps = 11/280 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+T LI+ +C+ +R+ +A LG+M++ G P++VT LLNG C+ RF++ +
Sbjct: 642 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQ------GNRFQEAV- 694
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ D M G P+V ++ V++ + +L+ M++KGI TY +++
Sbjct: 695 ---SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 751
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
L + GR DA LL +MV+ + P+ + + + A LY++M +
Sbjct: 752 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV- 810
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VPN+ TYN LI F + + +++ + D+ +Y LI G C+ ++ ++ +
Sbjct: 811 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 870
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
F EM +GL+ T+ TL G Q+ L +++ ++
Sbjct: 871 LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 910
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 139/303 (45%), Gaps = 17/303 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ +T L+ + R + F +M G+ ++ ++ +L++ CR + L
Sbjct: 68 LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSF--- 124
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A V +M G EP + +F +LH + ++ + + M + G P V
Sbjct: 125 -------ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVV 177
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE--YRGRKDANGAMKLYR 178
Y +++ LC G + A ELL EM + G+ TYN Y GR + A ++ R
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR--WSDAARMLR 235
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M + + P++ T+ LI +F+ +D +E++ + S + + +Y +I+GLC
Sbjct: 236 DMMKRSI-NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
+ +A + F M KG P VT+ TL G + M+ +L +++ E F ++
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG--FNADIF 352
Query: 299 NYH 301
Y+
Sbjct: 353 TYN 355
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 120/279 (43%), Gaps = 46/279 (16%)
Query: 13 GWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
G+ R + A EM+ P++V + LL A+L R+E I ++K
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTAT---ANL---RRYETVIYFSQK-- 96
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
M + GI D+ SF+I++H + R + +L L M + G P++ T+ S++ C
Sbjct: 97 --MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
RI DA L+ MV++G P N+
Sbjct: 155 NRIGDAFSLVILMVKSGYEP------------------------------------NVVV 178
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
YN LI +++ E+ N ++ LG D+ +Y L+ GLC +W +A + +M+
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++ + P VTF L ++ L + L K++ + S+
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 117/253 (46%), Gaps = 13/253 (5%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
+ D A EM++ P++V + +L + + +F+ I ++ +M
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKM------NKFDIVIY----LYHKMENL 633
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI D+ SF+I++H + R + L+L L M + G P++ T S++ C R ++A
Sbjct: 634 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 693
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI- 197
L+ M G P+ YN +D N A++++ M++ + + TYN LI
Sbjct: 694 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV-TYNTLIS 752
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
G+ + D R + + VK ++ ++ +T LI ++ EA + EMI + ++
Sbjct: 753 GLSNSGRWTDAARLLRDMVK-RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 811
Query: 258 PQKVTFETLYRGL 270
P T+ +L G
Sbjct: 812 PNVFTYNSLINGF 824
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 125/300 (41%), Gaps = 41/300 (13%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +I+G CK ++++ A + GV+P+ TY +++ G+C+ P R
Sbjct: 424 YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG---PR-------R 473
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP-QLSL------DKLNFMKEKGICPTV 119
A+++ M+ GI + + L +S ++K LSL K N + + P
Sbjct: 474 EADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPI- 532
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF-----FKEYRGRK------ 168
++S VK G + LL G +P F YR R
Sbjct: 533 -AFSSSVK-----GFVRRHYLLL----ERGNNPETSLSRSFSGASHHHHYRERLRNELHC 582
Query: 169 -DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS 227
+ A L+ +M + +P+I + ++ + +N+ D+V +++ ++ + DL S
Sbjct: 583 IKFDDAFSLFCEMLQSRP-IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 641
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+T+LIH C + A +M++ G P VT +L G Q + + L +D
Sbjct: 642 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 701
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 142/284 (50%), Gaps = 14/284 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YTSLI G+C+ + ++ + EM+ + + PNV T+NVL++ CR+ +
Sbjct: 257 PDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKM------ 310
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL-NFMKEKGICPTVA 120
A+ +F+ M RG +PD+ +F+ ++ + H L KL + + E+GI P V
Sbjct: 311 ----IEAQGMFNLMVKRGQQPDIVTFNTLISGHC-LHGNVLEARKLFDTVFERGILPDVW 365
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+YT ++ C C RI++A L EM + Y+ + A +L+ +
Sbjct: 366 SYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTI 425
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D PN+ TYNILI F + +DM E++ + G L + +Y +LI+G C+ ++
Sbjct: 426 NNDGP-PPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKR 484
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR-TWRRLK 283
+EA M K L P +T+ +L+ GL +S + W K
Sbjct: 485 IREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFK 528
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT LI G+CK RID A EM + + ++V Y+ L++G+C+
Sbjct: 361 LPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGR------ 414
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A ++F + G P+V +++I++ + + + ++ M KG+ PTV
Sbjct: 415 ----ISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVL 470
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ C RI +A LL M ++P + TYN F + A +L++ M
Sbjct: 471 TYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVM 530
Query: 181 KEDDLCVPNIHTYNILIGMF 200
V ++ TYN+L+ F
Sbjct: 531 HVGGPPV-DVATYNVLLDAF 549
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 137/300 (45%), Gaps = 32/300 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + I +C + + A LG +++RG +PN +T ++ G+C + F
Sbjct: 117 PSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDF 176
Query: 62 EKTIR-------------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ +A ++ EM + ++P++ +++++ + +
Sbjct: 177 HDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCK 236
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ D + + GI P + TYTS+++ C G+ + ++L+ EMV ++P+ T
Sbjct: 237 DELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYT 296
Query: 157 YNCFFKEY--RGRK-DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
+N + +G+ +A G L + + P+I T+N LI + R+++
Sbjct: 297 FNVLIDAFCRKGKMIEAQGMFNLMVKRGQQ----PDIVTFNTLISGHCLHGNVLEARKLF 352
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ V + D+ SYT+LI G C+ ++ EA F EM K ++ V + +L GL +S
Sbjct: 353 DTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKS 412
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++ +Y+SLI G CK RI A + G PNV+TYN+L++ C+
Sbjct: 398 DIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKI---------- 447
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ I ++F M +G+ P V +++I+++ Y ++ + + +++ L+ M+ K + P TY
Sbjct: 448 QDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITY 507
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
S+ LC GRI DA EL M G TYN + +D
Sbjct: 508 NSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 13/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + ++I K+ +A L +M+ +GV P++ T ++ +N C +
Sbjct: 81 LPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMG---- 136
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A V + RG +P+ + + V+ + Q ++D + + +G+
Sbjct: 137 ------FAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEV 190
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ LC GR DA +LL EM V P+ YN + + A LY +
Sbjct: 191 CYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLY--L 248
Query: 181 KEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
K D+ + P+I TY LI F + V+++ + + ++ ++ +LI C K
Sbjct: 249 KIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKG 308
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
K EA F M+++G P VTF TL G
Sbjct: 309 KMIEAQGMFNLMVKRGQQPDIVTFNTLISG 338
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 15/251 (5%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N ID A +I P+V+ +N ++ V + K A + +M
Sbjct: 63 NGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKM----------KHCPVAISLLKQMVF 112
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
+G+ P + + SI ++ Y + + L + ++G P T T+V+K LC G ++
Sbjct: 113 KGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQK 172
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A + + G+ Y + A +L ++M E + PNI YN++I
Sbjct: 173 AMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEM-EGQVVKPNIVIYNMII 231
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
F R+++ +K ++G+D D +YT LI G C +W E Q EM+ K
Sbjct: 232 DSFCKDELTCKARDLY--LKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKN 289
Query: 256 LLPQKVTFETL 266
+ P TF L
Sbjct: 290 INPNVYTFNVL 300
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
K L S I+DA L ++ PS +N K A+ L +QM +
Sbjct: 57 KILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGV- 115
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+I T +I I + L M + V + + T ++ GLC + ++A
Sbjct: 116 TPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMD 175
Query: 247 YFVEMIEKGLLPQKVTFETLYRGL 270
+ + +G+L +V + TL GL
Sbjct: 176 FHDNVAAQGMLLDEVCYGTLINGL 199
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 131/270 (48%), Gaps = 15/270 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y +LI G+C++ + A R EM+E+G P+V TY +L+NG R
Sbjct: 411 PTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNG----------SRK 460
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A + FDEM +G++PD +++ + ++ M KGI P T
Sbjct: 461 VRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVT 520
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G ++DA+ L +MV +G+ P TY C + R A KL M
Sbjct: 521 YNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMV 580
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLCEKQ 239
D L P++ TY IL+ R ++ K ++G++ + +Y +LIH LC
Sbjct: 581 SDGL-QPSVVTYTILV--HTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTG 637
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ A ++F EM+E+GL P K T+ L G
Sbjct: 638 RTPLAFRHFHEMLERGLAPNKYTYTLLIDG 667
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 140/316 (44%), Gaps = 27/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG--VEPNVVTYNVLLNGVCRRASLH--- 56
P + Y +L+ + K R D A L EM +G N VT+NV+++ + R L
Sbjct: 235 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAV 294
Query: 57 ---PNERFEKT------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ R K +R AE + EM GI P V +++ ++H
Sbjct: 295 KLVDSMRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLL 354
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + + K M+ G+ P V TY S++ C G +++A LLG++ R G++P+
Sbjct: 355 KCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVL 414
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN Y D A +L +M E C P++ TY IL+ + + M RE ++
Sbjct: 415 TYNTLIDGYCRLGDLAEARRLKEEMVEQG-CFPDVCTYTILMNGSRKVRNLAMAREFFDE 473
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ L D +Y I A Q M+ KG+ P VT+ + GL ++
Sbjct: 474 MLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 533
Query: 276 LRTWRRLKKKLDEESI 291
L+ +RLK K+ + +
Sbjct: 534 LKDAKRLKTKMVSDGL 549
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 15/278 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV--CRRASLHPNERFEKT 64
Y LI + + AE EM G+ P VVTYN +++G+ C +A
Sbjct: 311 YNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQA----------- 359
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
A+ F EMR G+ PDV +++ +L+ Y +A + +L L ++ G+ PTV TY +
Sbjct: 360 -EAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNT 418
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ C G + +A L EMV G P TY R ++ A + + +M
Sbjct: 419 LIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKG 478
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
L P+ YN I + L+ M ++ + + D +Y ++I GLC+ K+A
Sbjct: 479 L-QPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDA 537
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ +M+ GL P +T+ L + +LR R+L
Sbjct: 538 KRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKL 575
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 10/163 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT LI+ C+ + A + L M+ G++P+VVTY +L++ CRR +L+
Sbjct: 551 PDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLY----- 605
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A F +M GIEP+ ++++++H + L+ + M E+G+ P T
Sbjct: 606 -----SAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYT 660
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
YT ++ C G DA L EM +NG+ P T+N FK +
Sbjct: 661 YTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 703
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 4/175 (2%)
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
L L + G+ P V V++ L R +D + GEM++ V P+ TYN
Sbjct: 185 LCLAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLL 244
Query: 162 KEY--RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
+ GRKD +M L + N T+N++I ++ ++ + ++ S
Sbjct: 245 DSFLKEGRKD-EASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLS 303
Query: 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ +Y LI L E+ ++A +EM +G++P VT+ + GL++ +
Sbjct: 304 KKASSF-TYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCE 357
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 10/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ MYT ++ CK R+ A L EMI G P ++T+N L++G CR
Sbjct: 115 PDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCR---------- 164
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + A+ + +M G++ DV +++ ++ +A + Q + L MK G P V
Sbjct: 165 EKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVA 224
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S V LC G++ DA ++L +M + P+ TYN + A+++ QM
Sbjct: 225 YSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMA 284
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C N+ Y+ ++ L R R + + + D+ +Y+ L++GLC+ K
Sbjct: 285 SSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKI 344
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+EA + EM +G P VT+ +L GL L R+ +++
Sbjct: 345 EEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 139/287 (48%), Gaps = 13/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + +L+ G+ K R ER L M R ++PNVV+YN LL G+C+ H
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWH----- 62
Query: 62 EKTIRNAEKVFDEMRVRG--IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
AE++ +M RG PD+ ++S +L Y +A K + S + L + +G+ P
Sbjct: 63 -----EAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDA 117
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
YT VV LC R+ +A ELL EM+R G P+ T+N K+ A L ++
Sbjct: 118 LMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQK 177
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + ++ TYN L+ R+ ++ +K S D+ +Y+ ++GLC+
Sbjct: 178 MAASGV-KADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSG 236
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
K +A Q +M + P VT+ T+ GL +S + T + +++
Sbjct: 237 KVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQM 283
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 15/248 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+S +YG CK ++ A + L +M + +PNVVTYN +L+G+C+
Sbjct: 220 PDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGK------- 272
Query: 62 EKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A ++ ++M G +V +S V+ + + Q + + M G P V
Sbjct: 273 ---IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV 329
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+S+V LC G+IE+A E + EM G P+A TY A ++ +M
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Query: 181 KEDDL----CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
C P++ TYN LIG R+D + + ++ D SY+ ++ GL
Sbjct: 390 SSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLA 449
Query: 237 EKQKWKEA 244
+ +A
Sbjct: 450 RSGRALQA 457
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 92/231 (39%), Gaps = 36/231 (15%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G P+ +F+ +++ +S+ +P L M + I P V +Y +++ LC R +A
Sbjct: 5 GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEA 64
Query: 139 EELLGEMVRNG--VSPSAETYNCFFKEYRGRKDANGAMKLY-----RQMKEDDL------ 185
EEL+ +M+ G +P TY+ Y + +L R ++ D L
Sbjct: 65 EELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVV 124
Query: 186 -----------------------CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222
C P + T+N LI ++M + + S +
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVK 184
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
D+ +Y L+ GLC+ + +EA Q M G P V + + GL +S
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS 235
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 134/263 (50%), Gaps = 11/263 (4%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
L+ +C+ ++ +A FLG+M++ G EP++VT+ L+NG C R E+ A
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL------GNRMEE----AM 162
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+ ++M GI+PDV ++ ++ + +L + M+ GI P V YTS+V L
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C+ GR DA+ LL M + + P T+N + A +LY +M + PN
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI-APN 281
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
I TY LI F +D R+++ ++ D+ +YT LI+G C+ +K +A + F
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 250 EMIEKGLLPQKVTFETLYRGLIQ 272
EM +KGL +T+ TL +G Q
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQ 364
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 150/318 (47%), Gaps = 27/318 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+V MYTSL+ G C R A+ L M +R ++P+V+T+N L++ +
Sbjct: 210 PDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL 269
Query: 52 -----RASLHPNER----------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R S+ PN E + A ++F M +G PDV +++ +++ + +
Sbjct: 270 YNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK 329
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K ++ M +KG+ TYT++++ G+ A+E+ MV GV P+ T
Sbjct: 330 CKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRT 389
Query: 157 YNCFFKEYRGRKDANGAMKLYRQM--KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
YN A+ ++ M +E D PNI TYN+L+ +++ ++
Sbjct: 390 YNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFE 449
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
++ E+ + + +YT++I G+C+ K K A F + KG+ P VT+ T+ GL +
Sbjct: 450 DMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509
Query: 275 MLRTWRRLKKKLDEESIT 292
+ L +K+ E+ ++
Sbjct: 510 LKHEAHVLFRKMKEDGVS 527
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 136/317 (42%), Gaps = 49/317 (15%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82
A M+E P+++ + LLN + + ++F+ I + D +++ G+
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKM------KKFDVVI----NLCDHLQIMGVSH 105
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
D+ + +++++ + ++ +P L+ L M + G P + T+TS++ C R+E+A ++
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--------------DDLC-- 186
+MV G+ P Y N A+ L+ QM+ + LC
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 187 ------------------VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
P++ T+N LI F+ + E++N + + ++ +Y
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKK 284
T LI+G C + EA Q F M KG P V + +L G + D ++ + + +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 285 K-LDEESITFGSEFQNY 300
K L +IT+ + Q +
Sbjct: 346 KGLTGNTITYTTLIQGF 362
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 136/266 (51%), Gaps = 11/266 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+S+I CK +D A L M++ GV P+ +TYN +L+G C +S P E
Sbjct: 233 LPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC--SSGQPKE- 289
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +MR G+EP+V ++S +++ + + + + M ++G+ P +A
Sbjct: 290 -------AIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++++ + G + + LL MVRNG+ P +N Y ++ + AM ++ +M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L PN+ Y +I + +D + + L ++ YT LIHGLC K
Sbjct: 403 RQHGL-NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
W +A + +EM+++G+ + F ++
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSI 487
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 143/298 (47%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ G+ K D A EM++RG+ P+VVTY+ ++ +C+
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK---------- 248
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A +V + M G+ PD +++ +LH Y + +P+ ++ L M+ G+ P V T
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ LC GR +A ++ M + G+ P TY + Y K A M +
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGY-ATKGALVEMHALLDLM 367
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ H +NILI + ++D +++ ++ L ++ Y +I LC+
Sbjct: 368 VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSV 427
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+A YF +MI++GL P + + +L GL D L ++ + I + F N
Sbjct: 428 DDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFN 485
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 143/298 (47%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ +YTSLI+G C ++ D AE + EM++RG+ N + +N +++ C+
Sbjct: 444 PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK---------- 493
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +EK+FD M G++PD+ +++ ++ A K + L M G+ P + T
Sbjct: 494 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 553
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R++DA L EMV +GVSP+ TYN + + A +LY +
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 613
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + TYNI++ N D ++ ++ ++L L+ ++ ++I L + +
Sbjct: 614 KSGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 672
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
EA F GL+P T+ + LI+ L L ++E + S N
Sbjct: 673 DEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLN 730
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 9/261 (3%)
Query: 7 YTSLIYGWCKINRI-DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+T L+ G C R D + L M E G P+V +YN LL G+C R ++ +
Sbjct: 130 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLC------DENRSQEAL 183
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+ D+ R G PDV S++ VL+ + + + + M ++GI P V TY+S+
Sbjct: 184 ELLHMMADD-RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSI 242
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ LC ++ A E+L MV+NGV P TYN Y A+ ++M+ D +
Sbjct: 243 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 302
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
PN+ TY+ L+ R R+I++ + L D+ +Y L+ G K E
Sbjct: 303 -EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361
Query: 246 QYFVEMIEKGLLPQKVTFETL 266
M+ G+ P F L
Sbjct: 362 ALLDLMVRNGIQPDHHVFNIL 382
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 143/345 (41%), Gaps = 61/345 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PNV Y+SL+ CK R A + M +RG+EP++ TY LL G + +L
Sbjct: 304 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHAL 363
Query: 56 ---------HPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P+ ++ + A VF +MR G+ P+V + V+ V +
Sbjct: 364 LDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 423
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC------------------------ 132
+ ++ M ++G+ P + YTS++ LC+C
Sbjct: 424 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIF 483
Query: 133 -----------GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
GR+ ++E+L MVR GV P TYN + A KL M
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I TY LI + ++RMD ++ + S + ++ +Y +++ GL ++
Sbjct: 544 SVGV-KPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 602
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A + +V + + G + T+ + GL ++++ R+ + L
Sbjct: 603 AAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 7/216 (3%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
+A VFDE+ RG + + L +R H P ++ + N M G + PTV TY
Sbjct: 38 DARHVFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYA 96
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C C GR++ LG +V+ G A T+ K K + AM + + +
Sbjct: 97 ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV---KGSELGLDLDSYTMLIHGLCEKQK 240
C+P++ +YN L+ NR E+ + + +G D+ SY +++G ++
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+A + EM+++G+LP VT+ ++ L ++ +
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 20/278 (7%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V P V TY +L+ CR L + + N K +G D +F+ +L
Sbjct: 88 VTPTVHTYAILIGCCCRAGRL---DLGFAALGNVVK-------KGFRVDAITFTPLLKGL 137
Query: 95 SRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN---GV 150
+ ++D L M E G P V +Y +++K LC R ++A ELL M + G
Sbjct: 138 CADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGS 197
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
P +YN + D++ A Y +M + + +P++ TY+ +I MD
Sbjct: 198 PPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGI-LPDVVTYSSIIAALCKAQAMDKAM 256
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
E+ N + + + D +Y ++HG C + KEA +M G+ P VT+ +L L
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 316
Query: 271 IQSDMLRTWRRL-----KKKLDEESITFGSEFQNYHFK 303
++ R++ K+ L+ + T+ + Q Y K
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATK 354
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 25/193 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV--CRRASL---- 55
P++ Y +LI G+C+++R+D A EM+ GV PN++TYN++L G+ RR +
Sbjct: 549 PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 608
Query: 56 -----HPNERFEKTIRN--------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ E + N A ++F + + ++ + +F+I++ +
Sbjct: 609 YVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 668
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D G+ P V TY+ + + L G +E+ ++L M NG S +
Sbjct: 669 CGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRM 728
Query: 157 YNCFFKEYRGRKD 169
N ++ R D
Sbjct: 729 LNSIVRKLLQRGD 741
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 26/312 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LIYG CK ++ AE +LG+M+ G+EP+ TYN L+ G C+ + ER
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E A +F+E +GI+P+V ++ ++ S
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ N M EKG+ P V T+ +V LC G + DA+ L+ M+ G P T
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N Y + A+++ M D+ P+++TYN L+ ++ + V E + +
Sbjct: 464 FNILIHGYSTQLKMENALEILDVML-DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+L ++ +L+ LC +K EA EM K + P VTF TL G ++ L
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Query: 277 RTWRRLKKKLDE 288
L +K++E
Sbjct: 583 DGAYTLFRKMEE 594
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 133/297 (44%), Gaps = 45/297 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y +LI G I A + EM E+G+ P V T+N+L+NG+C+
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC------- 441
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A+ + M +G PD+ +F+I++H YS K + +L+ L+ M + G+ P V T
Sbjct: 442 ---VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 122 YTSVVKCLCSCGRIEDAEE-----------------------------------LLGEMV 146
Y S++ LC + ED E LL EM
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
V+P A T+ + D +GA L+R+M+E + TYNI+I F +
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNV 618
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
M +++ + LG D +Y +++ G C+ ++ +EM+E G +P T
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTL 675
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 152/339 (44%), Gaps = 49/339 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y I G C+ +D A R +G +IE+G +P+V+TYN L+ G+C+ N +
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK------NSK 301
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F++ AE +M G+EPD +++ ++ Y + QL+ + G P
Sbjct: 302 FQE----AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S++ LC G A L E + G+ P+ YN K + A +L +M
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 181 KEDDL------------------CV----------------PNIHTYNILIGMFMALNRM 206
E L CV P+I T+NILI + +M
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ EI + + + + D+ +Y L++GLC+ K+++ + + M+EKG P TF L
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 267 YRGLIQ----SDMLRTWRRLK-KKLDEESITFGSEFQNY 300
L + + L +K K ++ +++TFG+ +
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 134/324 (41%), Gaps = 44/324 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y +++ D A + M +RG+ P+V ++ + + C+ + H
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHA---- 164
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ + M +G E +V ++ V+ + + + M G+ ++T
Sbjct: 165 ------ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLST 218
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK----LY 177
+ +++ LC G +++ E+LL ++++ GV P+ TYN F + R + +GA++ L
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 178 RQMKEDDLCV------------------------------PNIHTYNILIGMFMALNRMD 207
Q + D+ P+ +TYN LI + +
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ I + D +Y LI GLC + + A F E + KG+ P + + TL
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 268 RGLIQSDMLRTWRRLKKKLDEESI 291
+GL M+ +L ++ E+ +
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGL 422
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 108/259 (41%), Gaps = 48/259 (18%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHV------YSRAHKPQLSLDKLNFMKEKGICPT 118
++ A VF+ M EP V S++ ++ V + +AHK + M+++GI P
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR------MRDRGITPD 145
Query: 119 VATYTSVVKCLCSCGRIEDA-----------------------------------EELLG 143
V ++T +K C R A EL G
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 144 EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL 203
+M+ +GVS T+N + + D KL ++ + + +PN+ TYN+ I
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV-LPNLFTYNLFIQGLCQR 264
Query: 204 NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
+D + + D+ +Y LI+GLC+ K++EA Y +M+ +GL P T+
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 264 ETLYRGLIQSDMLRTWRRL 282
TL G + M++ R+
Sbjct: 325 NTLIAGYCKGGMVQLAERI 343
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 30/186 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PN+ + L+ C+ ++D A L EM + V P+ VT+ L++G C+ L
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 58 ------------------------NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
E+ T+ AEK+F EM R + PD ++ +++
Sbjct: 589 FRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTM--AEKLFQEMVDRCLGPDGYTYRLMVDG 646
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ + L L M E G P++ T V+ CLC R+ +A ++ MV+ G+ P
Sbjct: 647 FCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Query: 154 AETYNC 159
A C
Sbjct: 707 AVNTIC 712
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 1/197 (0%)
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Y R K Q +++ M PTV +Y +++ L G + A ++ M G++P
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
++ K + + A++L M C N+ Y ++G F N E++
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQG-CEMNVVAYCTVVGGFYEENFKAEGYELF 204
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ S + L L ++ L+ LC+K KE + ++I++G+LP T+ +GL Q
Sbjct: 205 GKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQR 264
Query: 274 DMLRTWRRLKKKLDEES 290
L R+ L E+
Sbjct: 265 GELDGAVRMVGCLIEQG 281
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 100 PQLSLDKLNFM-KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETY 157
P +L+ N M KE G T++TY SV++ L G+ E EE+L +M N G Y
Sbjct: 20 PMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVY 79
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
K Y + A+ ++ +M D C P + +YN ++ + + D +++ ++
Sbjct: 80 VGAMKNYGRKGKVQEAVNVFERMDFYD-CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ D+ S+T+ + C+ + A + M +G V + T+ G + +
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 11/286 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ +T LI G ++ A MI+ G EPNVV YN L++G+C SL
Sbjct: 313 NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLE------ 366
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A +V D+M+ G P+VT++SI++ ++++ + + N M G P V TY
Sbjct: 367 ----EALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T +V LC + A L+ +M G +P+ T+N F K G AMKL +M+
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG 482
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C+PNI TYN L+ +N+ + ++ ++ L +L +Y +++G
Sbjct: 483 HG-CLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 541
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
EA Q F + + +G P +T+ T+ + ++ +L +++
Sbjct: 542 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSS 587
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 134/286 (46%), Gaps = 22/286 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V++Y L+ N+ M M + G+ PNV TYN+LL +C+ N+R
Sbjct: 142 PTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCK------NDRV 195
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+F EM +G PD +++ ++ +A K + + K P+V
Sbjct: 196 DA----AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPV 246
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ +C GRIE A +LLGEM+ NGV P+ +Y+C + A L+ QM
Sbjct: 247 YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMF 306
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C NIHT+ LI G FM ++ ++W + ++ +Y LIHGLC
Sbjct: 307 LRG-CDANIHTFTPLIKGCFMR-GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGS 364
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML----RTWRRL 282
+EA Q +M G LP T+ L G +S L TW R+
Sbjct: 365 LEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRM 410
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 153/338 (45%), Gaps = 49/338 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +Y +LI G CK RI++A + LGEM++ GV+PNVV+Y+ ++N +C +
Sbjct: 242 PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGN------- 294
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +F +M +RG + ++ +F+ ++ K +LD M + G P V
Sbjct: 295 ---VELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
Y +++ LCS G +E+A ++ +M R+G P+ TY+ + D GA + + +M
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411
Query: 181 -------------------------KEDDL--------CVPNIHTYNILIGMFMALNRMD 207
+ + L C PN T+N I R++
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVE 471
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
++ ++G ++ +Y L+ L K++EA F E+ + L P VT+ T+
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531
Query: 268 RGLIQSDMLRT-----WRRLKKKLDEESITFGSEFQNY 300
G ++ M+ + L + +SIT+ + Y
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAY 569
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 21/290 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE- 59
+PNV Y L+ CK +R+D A + EM +G P+ VTY +++ +C+ +
Sbjct: 176 IPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARE 235
Query: 60 ---RF----------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP 100
RF E I A K+ EM G++P+V S+S +++ +
Sbjct: 236 LAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNV 295
Query: 101 QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
+L+ M +G + T+T ++K G++ +A +L M+++G P+ YN
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTL 355
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
A+++ QM+ C+PN+ TY+ILI F + E WN +
Sbjct: 356 IHGLCSNGSLEEALQVCDQMQRSG-CLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ +YT ++ LC+ + +A +M +G P +TF T +GL
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGL 464
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 128/312 (41%), Gaps = 55/312 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI+G C ++ A + +M G PNV TY++L++G + L
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDL------ 400
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK----GICP 117
A + ++ M G P+V +++ ++ V + D+ N + EK G P
Sbjct: 401 ----VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSM----FDQANSLVEKMTLEGCTP 452
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T+ + +K LC GR+E A +LL M +G P+ TYN A L+
Sbjct: 453 NTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLF 512
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH--VKGS---------------- 219
++++ +L PN+ TYN ++ F M +++ V+G+
Sbjct: 513 QEIEARNL-QPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK 571
Query: 220 ------------------ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
E D+ +YT LI G C +EA + + I +G+ P
Sbjct: 572 QGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFA 631
Query: 262 TFETLYRGLIQS 273
T+ L R S
Sbjct: 632 TWNALVRCFFDS 643
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 87/168 (51%), Gaps = 19/168 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y L+ ++N+ + A E+ R ++PN+VTYN +L G R +
Sbjct: 486 LPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG---- 541
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLS---LDKLNFMKEKGICP 117
A ++F + VRG PD +++ ++H Y + K +++ +++++ MKE P
Sbjct: 542 ------EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWH--P 593
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN----CFF 161
+ TYTS++ C+ IE+A L + + G+ P+ T+N CFF
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 641
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T +TY +++ L ++ + +L +M +G++ + + C Y+ A A+K++
Sbjct: 73 TASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF 132
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
++ E C P + YN L+ ++ N+ M+ ++ ++K L ++ +Y +L+ LC+
Sbjct: 133 YRIGEFG-CKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCK 191
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ A + FVEM KG P VT+ T+ L ++ + R L +
Sbjct: 192 NDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240
>gi|297807171|ref|XP_002871469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317306|gb|EFH47728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 602
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 141/284 (49%), Gaps = 15/284 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V+++ L+ GW + ++ AE+ EM V+P VVTY L+ G CR
Sbjct: 247 VPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRM-------- 298
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN--FMKEKGICPT 118
+ + A ++ +EM++ +E F+ ++ A + +L + F+ E G PT
Sbjct: 299 --RRVEIAMEILEEMKMAEMELTFMVFNPIIDGLGEAGRLSEALGMMERFFVCESG--PT 354
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ TY S+VK C G + A ++L M+ GV P+ TYN FFK + M LY
Sbjct: 355 IVTYNSLVKNFCKAGDLPGASKILKMMMTRGVEPTTSTYNHFFKYFSKHNKTEEGMNLYF 414
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
++ E P+ TY++++ M ++ + ++ +K + DL + TML+H LC
Sbjct: 415 KLIEAGHS-PDRLTYHLILKMLCEDGKLSLAIQVNKEMKNRGIDPDLLTTTMLMHLLCRL 473
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+EA + F + +G++PQ +TF+ + GL M +RL
Sbjct: 474 DMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMTDMAKRL 517
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 136/282 (48%), Gaps = 12/282 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAER-FLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
PNV +TSLI G CKI ++ A R FL + +PNV TY V++ G C+
Sbjct: 284 PNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCK--------- 334
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + AE + M +G+ P+ +++ ++H + + + + +N MK +G P +
Sbjct: 335 -EGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIY 393
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ C G+I++A ++L G+ TY E+ + A+ L++QM
Sbjct: 394 TYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQM 453
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E C P+IHTY +I M+ +M+ +++++ L +YT +I G C K
Sbjct: 454 AEKS-CHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGK 512
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
A + F M++ G LP +T+ L L + L R L
Sbjct: 513 LTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARAL 554
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 12/260 (4%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRN 67
T ++ +C+ R M E G PN+V Y+ ++G+C R ++
Sbjct: 220 TVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERG----------YVKQ 269
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK-LNFMKEKGICPTVATYTSVV 126
A V +EM +G++P+V + + ++ + + + L +K P V TYT ++
Sbjct: 270 AFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMI 329
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G++ AE LLG MV G++P+ TY + + A +L +MK +
Sbjct: 330 GGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGF- 388
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+PNI+TYN +IG F ++ ++ L LD +YT+LI C++ A
Sbjct: 389 LPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALD 448
Query: 247 YFVEMIEKGLLPQKVTFETL 266
F +M EK P T+ T+
Sbjct: 449 LFKQMAEKSCHPDIHTYTTI 468
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 10/239 (4%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
GV P+ ++ L+ G CR RFE+ A+ + M +G D + ++V+
Sbjct: 176 GVRPDHRSFRALVLGCCREG------RFEE----ADALLAAMWAQGFCLDSATCTVVVRA 225
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ R + + D M E G P + Y++ + LC G ++ A +L EMV G+ P+
Sbjct: 226 FCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPN 285
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
T+ A +L+ ++ + PN+HTY ++IG + ++ +
Sbjct: 286 VYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLL 345
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ L + ++YT LIHG C+ + A + +M +G LP T+ + G +
Sbjct: 346 GRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCK 404
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 26/212 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+LI+G CK D A + +M G PN+ TYN ++ G C++ + +
Sbjct: 355 PNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKV 414
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ I A +F +M + PD+ +++ ++ +Y +
Sbjct: 415 LRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQ 474
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + S + G+ PT TYTS++ C G++ A ++ MV++G P + T
Sbjct: 475 QRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSIT 534
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
Y A L+ M + L VP
Sbjct: 535 YGALISSLCKESRLEEARALFETMLDKHL-VP 565
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 89/233 (38%), Gaps = 47/233 (20%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR-----AHKPQLSLDKLNFMKEKGICPTV 119
+R A + E+R G+ V + + VL V R AH + + D + G+ P
Sbjct: 124 LREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHARE-AFDGMA-RAAGGVRPDH 181
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
++ ++V C GR E+A+ LL M G + T + + + L+R+
Sbjct: 182 RSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRR 241
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCE 237
M SE+G ++ +Y+ I GLCE
Sbjct: 242 M--------------------------------------SEMGTPPNMVNYSAWIDGLCE 263
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ K+A EM+ KGL P T +L GL + + RL KL + S
Sbjct: 264 RGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSS 316
>gi|357142780|ref|XP_003572691.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 132/268 (49%), Gaps = 14/268 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + ++GWC RID A + EM +G P+V+TY +L C+
Sbjct: 218 PDAYTFNIFVHGWCSARRIDEAMWTIEEMKAQGFPPSVITYTTVLEAYCK---------- 267
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ R ++ D M G P+V ++++++ ++ H + +L + MK G P
Sbjct: 268 QHNFRMVYEILDSMSSEGCHPNVITYTMIMTSLAKCHMFEEALSVSHRMKSSGCKPDTLF 327
Query: 122 YTSVVKCLCSCGRIEDAEELLG-EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y S++ L G + +A ++ EM NGV S TYN + + A+ + ++M
Sbjct: 328 YNSLINLLGKAGHLSEASQVFQVEMPMNGVPRSLATYNTMISVFCYKDLDEDALSVLKEM 387
Query: 181 KEDDLCVPNIHTYNILIGMFMAL-NRMDMVREIWNHVKGS-ELGLDLDSYTMLIHGLCEK 238
E C P++ TY L+ +F++ + D VR + N + LGLDLD+YT+LIHGLC
Sbjct: 388 -ETQSCKPDLQTYRPLLRLFLSRRGQDDTVRNLLNELMNKHSLGLDLDTYTLLIHGLCRV 446
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ A + F EM+ ++P+ T E L
Sbjct: 447 GETDWAYRLFDEMVGSEIVPRYRTCELL 474
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 13/170 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAER-FLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P+ Y SLI K + A + F EM GV ++ TYN +++ C
Sbjct: 323 PDTLFYNSLINLLGKAGHLSEASQVFQVEMPMNGVPRSLATYNTMISVFC---------- 372
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-SRAHKPQLSLDKLN-FMKEKGICPT 118
++ +A V EM + +PD+ ++ +L ++ SR + + LN M + +
Sbjct: 373 YKDLDEDALSVLKEMETQSCKPDLQTYRPLLRLFLSRRGQDDTVRNLLNELMNKHSLGLD 432
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168
+ TYT ++ LC G + A L EMV + + P T E + +K
Sbjct: 433 LDTYTLLIHGLCRVGETDWAYRLFDEMVGSEIVPRYRTCELLLSEAQRKK 482
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 70/172 (40%), Gaps = 3/172 (1%)
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
D L+ M +G+ A TS+ + L R +DA L ++ G+ + ET N
Sbjct: 138 DLLSDMHCRGLVTVEAAATSIRR-LAGARRWKDAVLLFDKLGDMGLERNTETMNVLLDAL 196
Query: 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
K A K++ + P+ +T+NI + + + R+D +K
Sbjct: 197 CKEKKVEVARKVFLVLSPH--IQPDAYTFNIFVHGWCSARRIDEAMWTIEEMKAQGFPPS 254
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ +YT ++ C++ ++ + M +G P +T+ + L + M
Sbjct: 255 VITYTTVLEAYCKQHNFRMVYEILDSMSSEGCHPNVITYTMIMTSLAKCHMF 306
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 149/291 (51%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + LI CK ++ A++ LG MIE G+ P++VTYN L+ G C L+
Sbjct: 258 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLN----- 312
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++F M +G EPDV S++++++ YS+ K + ++ N M G P V T
Sbjct: 313 -----SARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 367
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++K + G+++DA++L M +G++ ++ TY F AMKL+ ++K
Sbjct: 368 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 427
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + I N LI +++ E++ + ++ +YT++IHG C + +
Sbjct: 428 SSNFKL-EIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 486
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A +M G P +T+ TL RG +S+ L +L ++ ++ ++
Sbjct: 487 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 537
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 146/298 (48%), Gaps = 15/298 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMI------ERGVEPNVVTYNVLLNGVCRRASL 55
P+V Y +LI G C I++A + EM+ E +PNV+TYN++++G+C+
Sbjct: 172 PDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRE 231
Query: 56 HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
++ + ++ + +EM +G++PD+ +F++++ + K + L M E GI
Sbjct: 232 DEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 291
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P + TY S+++ C G + A EL M G P +YN Y AMK
Sbjct: 292 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMK 351
Query: 176 LYRQMKEDDLCV---PNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
LY +M L V PN+ TY+ L+ G+F+A ++D +++++ +K + + +Y +
Sbjct: 352 LYNEM----LLVGKRPNVITYDSLLKGIFLA-GKVDDAKKLFSVMKAHGIAENSYTYGIF 406
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
+ GLC+ EA + F E+ + L GL ++ L T L +KL E
Sbjct: 407 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE 464
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 134/285 (47%), Gaps = 27/285 (9%)
Query: 15 CKINRIDM--AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
CK + A F M+ P++ ++N LL+G+ + H ++ F ++
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIK--HYSQVFS--------LY 92
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
++MR+ G+ D + +I+L+ ++ + + +G P + TY +++K LC
Sbjct: 93 NQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCME 152
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL-----CV 187
RI +A L M + G +P TY K G + N A+KL+++M D C
Sbjct: 153 HRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCK 212
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL--------GL--DLDSYTMLIHGLCE 237
PN+ TYNI++ + R D ++++ +K + GL D+ ++ +LI LC+
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCK 272
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ K EA + MIE G++P VT+ +L G L + R L
Sbjct: 273 EGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 317
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 128/294 (43%), Gaps = 51/294 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y SLI G+C + ++ A M +G EP+V++YNVL+NG
Sbjct: 292 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLING------------ 339
Query: 61 FEKTIR--NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ KT++ A K+++EM + G P+V ++ +L A K + + MK GI
Sbjct: 340 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 399
Query: 119 VATY-----------------------------------TSVVKCLCSCGRIEDAEELLG 143
TY ++ LC G++E A EL
Sbjct: 400 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 459
Query: 144 EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL 203
++ G P+ TY + + A L ++M E + C P+I TYN L+ F
Sbjct: 460 KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM-EANGCTPDIITYNTLMRGFYES 518
Query: 204 NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM-IEKGL 256
N+++ V ++ + + ++ D + ++++ L + +K++E I+KG+
Sbjct: 519 NKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 572
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 8/151 (5%)
Query: 152 PSAETYNCFFKEY--RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
PS FF + G A A+ + M P++ ++N L+ + V
Sbjct: 30 PSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTP-TPSLSSFNHLLSGLAKIKHYSQV 88
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++N ++ S L D + +L++ LC + +E F ++ +G P VT+ TL +G
Sbjct: 89 FSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKG 148
Query: 270 LIQ----SDMLRTWRRLKK-KLDEESITFGS 295
L S+ R + R++K + +T+G+
Sbjct: 149 LCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 149/291 (51%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + LI CK ++ A++ LG MIE G+ P++VTYN L+ G C L+
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLN----- 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++F M +G EPDV S++++++ YS+ K + ++ N M G P V T
Sbjct: 338 -----SARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 392
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++K + G+++DA++L M +G++ ++ TY F AMKL+ ++K
Sbjct: 393 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 452
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + I N LI +++ E++ + ++ +YT++IHG C + +
Sbjct: 453 SSNFKL-EIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 511
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A +M G P +T+ TL RG +S+ L +L ++ ++ ++
Sbjct: 512 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 562
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 158/304 (51%), Gaps = 19/304 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMI------ERGVEPNVVTYNVLLNGVCRRASL 55
P+V Y +LI G C I++A + EM+ E +PNV+TYN++++G+C+
Sbjct: 172 PDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG-- 229
Query: 56 HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
R ++ A+++F+EM+ +G+ P + S++ ++H + A K + S L+ M ++G+
Sbjct: 230 ----REDE----AKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGL 281
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P + T+ ++ LC G++ +A++LLG M+ +G+ P TYN + + D N A +
Sbjct: 282 QPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARE 341
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
L+ M C P++ +YN+LI + +++ +++N + ++ +Y L+ G+
Sbjct: 342 LFVSMPSKG-CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGI 400
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
K +A + F M G+ T+ GL ++D L +L +L +S F
Sbjct: 401 FLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL--KSSNFKL 458
Query: 296 EFQN 299
E +N
Sbjct: 459 EIEN 462
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 146/298 (48%), Gaps = 10/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +LI G C +RI A R M + G P+VVTY L+ G+C +++ +
Sbjct: 137 PNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKL 196
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + N ++ +P+V +++I++ + + + MK +G+ P++ +
Sbjct: 197 HQEMLNDISRYE----INCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIIS 252
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C G+ E+++ LL EM+ G+ P T+N A KL M
Sbjct: 253 YNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI 312
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + VP++ TYN LI F + ++ RE++ + D+ SY +LI+G + K
Sbjct: 313 ESGI-VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKV 371
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFG 294
+EA + + EM+ G P +T+++L +G+ + + ++L + E S T+G
Sbjct: 372 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYG 429
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 135/284 (47%), Gaps = 17/284 (5%)
Query: 15 CKINRIDM--AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
CK + A F M+ P++ ++N LL+G+ + H ++ F ++
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIK--HYSQVFS--------LY 92
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
++MR+ G+ D + +I+L+ ++ + + +G P + TY +++K LC
Sbjct: 93 NQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCME 152
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL-----CV 187
RI +A L M + G +P TY K G + N A+KL+++M D C
Sbjct: 153 HRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCK 212
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
PN+ TYNI++ + R D ++++ +K + + SY LIHG C KW+E+ +
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRL 272
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM+++GL P VTF L L + + ++L + E I
Sbjct: 273 LDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 316
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 128/294 (43%), Gaps = 51/294 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y SLI G+C + ++ A M +G EP+V++YNVL+NG
Sbjct: 317 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLING------------ 364
Query: 61 FEKTIR--NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ KT++ A K+++EM + G P+V ++ +L A K + + MK GI
Sbjct: 365 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 424
Query: 119 VATY-----------------------------------TSVVKCLCSCGRIEDAEELLG 143
TY ++ LC G++E A EL
Sbjct: 425 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 484
Query: 144 EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL 203
++ G P+ TY + + A L ++M E + C P+I TYN L+ F
Sbjct: 485 KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM-EANGCTPDIITYNTLMRGFYES 543
Query: 204 NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM-IEKGL 256
N+++ V ++ + + ++ D + ++++ L + +K++E I+KG+
Sbjct: 544 NKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 597
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 8/151 (5%)
Query: 152 PSAETYNCFFKEY--RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
PS FF + G A A+ + M P++ ++N L+ + V
Sbjct: 30 PSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTP-TPSLSSFNHLLSGLAKIKHYSQV 88
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++N ++ S L D + +L++ LC + +E F ++ +G P VT+ TL +G
Sbjct: 89 FSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKG 148
Query: 270 LIQ----SDMLRTWRRLKK-KLDEESITFGS 295
L S+ R + R++K + +T+G+
Sbjct: 149 LCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 11/286 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ +T LI G ++ A MI+ G EPNVV YN L++G+C SL
Sbjct: 313 NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLE------ 366
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A +V D+M+ G P+VT++SI++ ++++ + + N M G P V TY
Sbjct: 367 ----EALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T +V LC + A L+ +M G +P+ T+N F K G AMKL +M+
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQG 482
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C+PNI TYN L+ +N+ + ++ ++ L +L +Y +++G
Sbjct: 483 HG-CLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 541
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
EA Q F + + +G P +T+ T+ + ++ +L +++
Sbjct: 542 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSS 587
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 134/286 (46%), Gaps = 22/286 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V++Y L+ N+ M M + G+ PNV TYN+LL +C+ N+R
Sbjct: 142 PTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCK------NDRV 195
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+F EM +G PD +++ ++ +A K + + K P+V
Sbjct: 196 DA----AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPV 246
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ +C GRIE A +LLGEM+ NGV P+ +Y+C + A L+ QM
Sbjct: 247 YNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMF 306
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C NIHT+ LI G FM ++ ++W + ++ +Y LIHGLC
Sbjct: 307 LRG-CDANIHTFTPLIKGCFMR-GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGS 364
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML----RTWRRL 282
+EA Q +M G LP T+ L G +S L TW R+
Sbjct: 365 LEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRM 410
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 153/338 (45%), Gaps = 49/338 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +Y +LI G CK RI++A + LGEM++ GV+PNVV+Y+ ++N +C +
Sbjct: 242 PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGN------- 294
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +F +M +RG + ++ +F+ ++ K +LD M + G P V
Sbjct: 295 ---VELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
Y +++ LCS G +E+A ++ +M R+G P+ TY+ + D GA + + +M
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411
Query: 181 -------------------------KEDDL--------CVPNIHTYNILIGMFMALNRMD 207
+ + L C PN T+N I R++
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVE 471
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
++ ++G ++ +Y L+ L K++EA F E+ + L P VT+ T+
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531
Query: 268 RGLIQSDMLRT-----WRRLKKKLDEESITFGSEFQNY 300
G ++ M+ + L + +SIT+ + Y
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAY 569
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 21/290 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE- 59
+PNV Y L+ CK +R+D A + EM +G P+ VTY +++ +C+ +
Sbjct: 176 IPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARE 235
Query: 60 ---RF----------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP 100
RF E I A K+ EM G++P+V S+S +++ +
Sbjct: 236 LAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNV 295
Query: 101 QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
+L+ M +G + T+T ++K G++ +A +L M+++G P+ YN
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTL 355
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
A+++ QM+ C+PN+ TY+ILI F + E WN +
Sbjct: 356 IHGLCSNGSLEEALQVCDQMQRSG-CLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ +YT ++ LC+ + +A +M +G P +TF T +GL
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGL 464
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 128/312 (41%), Gaps = 55/312 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI+G C ++ A + +M G PNV TY++L++G + L
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDL------ 400
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK----GICP 117
A + ++ M G P+V +++ ++ V + D+ N + EK G P
Sbjct: 401 ----VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSM----FDQANSLVEKMTLEGCTP 452
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T+ + +K LC GR+E A +LL M +G P+ TYN A L+
Sbjct: 453 NTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLF 512
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH--VKGS---------------- 219
++++ +L PN+ TYN ++ F M +++ V+G+
Sbjct: 513 QEIEARNL-QPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK 571
Query: 220 ------------------ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
E D+ +YT LI G C +EA + + I +G+ P
Sbjct: 572 QGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFA 631
Query: 262 TFETLYRGLIQS 273
T+ L R S
Sbjct: 632 TWNALVRCFFDS 643
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 87/168 (51%), Gaps = 19/168 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y L+ ++N+ + A E+ R ++PN+VTYN +L G R +
Sbjct: 486 LPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG---- 541
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLS---LDKLNFMKEKGICP 117
A ++F + VRG PD +++ ++H Y + K +++ +++++ MKE P
Sbjct: 542 ------EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWH--P 593
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN----CFF 161
+ TYTS++ C+ IE+A L + + G+ P+ T+N CFF
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 641
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T +TY +++ L ++ + +L +M +G++ + + C Y+ A A+K++
Sbjct: 73 TASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF 132
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
++ E C P + YN L+ ++ N+ M+ ++ ++K L ++ +Y +L+ LC+
Sbjct: 133 YRIGEFG-CKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCK 191
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ A + FVEM KG P VT+ T+ L ++ + R L +
Sbjct: 192 NDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 148/324 (45%), Gaps = 28/324 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC-----RRA--- 53
PNV Y +LI CK+ R+D AE +MI GV PN+V +N L+ G+C RA
Sbjct: 342 PNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEEL 401
Query: 54 -------SLHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ PN F T + ++ D M G+ PD S++ ++ Y
Sbjct: 402 VYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCL 461
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + + M G+ PT TY +++ CS RI+DA L EM+R GV+P T
Sbjct: 462 AGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVT 521
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNH 215
YN K + A +LY M C +I+TYNI++ N +D +++
Sbjct: 522 YNTILHGLFQTKRFSEAKELYLNMINSGTKC--DIYTYNIILNGLCKSNCVDEAFKMFQS 579
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ L L++ ++T++I L + + ++A F + GL+P VT+ + LI+
Sbjct: 580 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGS 639
Query: 276 LRTWRRLKKKLDEESITFGSEFQN 299
L + L +++ S+ N
Sbjct: 640 LEEFDSLFSAMEKNGTAPNSQMLN 663
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 140/315 (44%), Gaps = 23/315 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PNV YT++I G CK D AE +MI+ GV+PN TYN L++G
Sbjct: 205 PNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQM 264
Query: 54 -------SLHPNERFEKTIRN-------AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK 99
L P+ ++ N D M G+ PD F+I Y++
Sbjct: 265 LEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGM 324
Query: 100 PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC 159
++D N M++ G+ P V Y +++ LC GR++DAE +M+ GV+P+ +N
Sbjct: 325 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNS 384
Query: 160 FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
A +L +M + +C PN +N LI + R+ R + + ++
Sbjct: 385 LVYGLCTVDKWERAEELVYEMLDQGIC-PNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 443
Query: 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 279
+ D SYT LI G C + EA + F M+ GL P +VT+ TL G + +
Sbjct: 444 GVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 503
Query: 280 RRLKKKLDEESITFG 294
L +++ + +T G
Sbjct: 504 YCLFREMLRKGVTPG 518
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 140/332 (42%), Gaps = 43/332 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+ LI C++ R+ + G +++ G N + N LL G+C +R
Sbjct: 96 PNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLC------DGKRV 149
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE---KGICPT 118
+ + + + M G PD S+SI+L + ++ + +L+ L M + P
Sbjct: 150 GEAM---DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPN 206
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-------------- 164
V TYT+V+ LC + AE + +M+ NGV P+ +TYNC Y
Sbjct: 207 VVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLE 266
Query: 165 ----RGRKD-------------ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
RG K A M + + ++ P+ H +NI + +D
Sbjct: 267 KMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMID 326
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+I+N ++ L ++ +Y LI LC+ + +A F +MI +G+ P V F +L
Sbjct: 327 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 386
Query: 268 RGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
GL D L ++ ++ I + F N
Sbjct: 387 YGLCTVDKWERAEELVYEMLDQGICPNAVFFN 418
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y ++++G + R A+ MI G + ++ TYN++LNG+C+
Sbjct: 517 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCK---------- 566
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+F + +G++ ++ +F+I++ + + + ++D + G+ P V T
Sbjct: 567 SNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVT 626
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V + L G +E+ + L M +NG +P+++ N + R D + A ++
Sbjct: 627 YRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLD 686
Query: 182 EDDLCVPNIHTYNILIGMFMA 202
E + V T ++LI +F +
Sbjct: 687 ERNFSV-EASTTSLLISIFTS 706
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ-----------LSLDKLNFMKEK 113
+ +A K+FDE+ + V +F+ +L+ SRA + L + N M +
Sbjct: 30 LDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVRE 89
Query: 114 ---GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
+ P TY+ ++ CLC GR++ + G +++ G + N K K
Sbjct: 90 CSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRV 149
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR----MDMVREIWNHVKGSELGLDLD 226
AM + Q + C P+ +Y+IL+ F NR ++++R + N G ++
Sbjct: 150 GEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAND-HGRSCPPNVV 208
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+YT +I GLC+ Q + A F +MI+ G+ P T+ L G + + W+ + + L
Sbjct: 209 TYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLS---IGKWKEVVQML 265
Query: 287 DEES 290
++ S
Sbjct: 266 EKMS 269
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 132/269 (49%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + SL++G+C +NRI A + M++ G EPNVV YN L++G+C+ L+
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNI---- 194
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ +EM +G+ DV +++ +L + + + L M ++ I P V T
Sbjct: 195 ------ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ G +++A+EL EM+++ V P+ TYN A K + M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN+ TYN LI F +D +++ + D+ +Y LIHG C+ K
Sbjct: 309 SKG-CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ A F M+ + + P +T L GL
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGL 396
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 154/339 (45%), Gaps = 46/339 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y +LI G CK +++A L EM ++G+ +VVTYN LL G+C +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC----------Y 223
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ +M R I PDV +F+ ++ V+ + + + M + + P T
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR+ DA++ M G P+ TYN + + + MKL+++M
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIW---------------------------- 213
+ +I TYN LI + + ++ + +I+
Sbjct: 344 CEGF-NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 214 -------NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ SE + + +Y ++IHGLC+ K ++A + F + +G+ P T+ +
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPY 305
GL ++ R L +++ EE I ++ H + +
Sbjct: 463 ILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEH 501
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 139/303 (45%), Gaps = 17/303 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ +T L+ + R + F +M G+ ++ ++ +L++ CR + L
Sbjct: 68 LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRL----- 122
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A V +M G EP + +F +LH + ++ + + M + G P V
Sbjct: 123 -----SFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVV 177
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE--YRGRKDANGAMKLYR 178
Y +++ LC G + A ELL EM + G+ TYN Y GR + A ++ R
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR--WSDAARMLR 235
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M + + P++ T+ LI +F+ +D +E++ + S + + +Y +I+GLC
Sbjct: 236 DMMKRSI-NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
+ +A + F M KG P VT+ TL G + M+ +L +++ E F ++
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG--FNADIF 352
Query: 299 NYH 301
Y+
Sbjct: 353 TYN 355
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 120/279 (43%), Gaps = 46/279 (16%)
Query: 13 GWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
G+ R + A EM+ P++V + LL A+L R+E I ++K
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTAT---ANL---RRYETVIYFSQK-- 96
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
M + GI D+ SF+I++H + R + +L L M + G P++ T+ S++ C
Sbjct: 97 --MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
RI DA L+ MV++G P N+
Sbjct: 155 NRIGDAFSLVILMVKSGYEP------------------------------------NVVV 178
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
YN LI +++ E+ N ++ LG D+ +Y L+ GLC +W +A + +M+
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++ + P VTF L ++ L + L K++ + S+
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 142/291 (48%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + L++ K + +F +MI G+ P+V TYNV+++ +C+
Sbjct: 251 LPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCK--------- 301
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + N+ ++F +MR G+ PDV +++ ++ Y + + N MK+ G P +
Sbjct: 302 -EGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 360
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ C C ++ A E EM NG+ P+ TY+ + GA+KL+ M
Sbjct: 361 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDM 420
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L +PN TY LI + ++ N + + + L++ +YT L+ GLC+ +
Sbjct: 421 RRTGL-LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGR 479
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EA + F M++ G+ P + + L G I+++ + ++ K++ E +I
Sbjct: 480 MIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 530
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 139/293 (47%), Gaps = 11/293 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YTSLI CK + A + L +M++ GV+ N+VTY LL+G+C+ +
Sbjct: 426 LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI---- 481
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
AE+VF M GI P+ ++ ++H Y +A + + ++ L M E I P +
Sbjct: 482 ------EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLI 535
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y S++ CS ++E+ + +L EM G+S + Y ++ A+ +++M
Sbjct: 536 LYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEM 595
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+D I TY +LI +++ + + + L ++ YT LI GLC+
Sbjct: 596 -QDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNC 654
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
+ A + F EM +G+ P F L G ++ L+ L ++ E +I F
Sbjct: 655 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF 707
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 136/286 (47%), Gaps = 11/286 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN ++YT+L++G+ K R++ A + L +M E ++P+++ Y ++ G C
Sbjct: 497 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCS---------- 546
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + + + +EM+ RGI + + ++ Y +A K +L+ M++ G+ T+ T
Sbjct: 547 QRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVT 606
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G +E A + M+ G+ P+ Y A KL+ +M+
Sbjct: 607 YCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQ 666
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I + LI + + + + + + DL YT L+ G + +
Sbjct: 667 CRGM-TPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGEL 725
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+A ++F EMIEKG+LP++V L R + L LK +++
Sbjct: 726 HQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEME 771
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 2/223 (0%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ A + F MR P S + +LH S++ QL N M GI P+V TY
Sbjct: 235 LEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNV 294
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ LC G +E++ L +M G+SP TYN Y L+ +MK D
Sbjct: 295 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK-DV 353
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
CVP+I TYN LI + +M E ++ +K + L ++ +Y+ LI C++ + A
Sbjct: 354 GCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGA 413
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRLKKKL 286
+ FV+M GLLP + T+ +L ++ ++ W+ L L
Sbjct: 414 IKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 456
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 141/298 (47%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+ +I G+ ++D EMI+RG+ P+VVTY +++G+C+ + F
Sbjct: 197 PNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKA------QLF 250
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ AE VF +M G +P+ +++ ++H Y K + + L M +G+ P T
Sbjct: 251 DR----AEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYT 306
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR +A M+R G+ P TY Y K A M + +
Sbjct: 307 YGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGY-ATKGALSEMHSFLDLM 365
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ P+ H +NI + +D +I+N ++ L ++ +Y LI LC+ +
Sbjct: 366 VENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRV 425
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+A F +MI +G+ P V F +L GL D L ++ ++ I + F N
Sbjct: 426 DDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFN 483
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 147/324 (45%), Gaps = 28/324 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC-----RRA--- 53
PNV Y +LI CK+ R+D AE +MI GV PN+V +N L+ G+C RA
Sbjct: 407 PNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEEL 466
Query: 54 -------SLHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ PN F T + ++ D M G+ PD S++ ++ Y
Sbjct: 467 VYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCL 526
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + M G+ PT TY +++ CS RI+DA L EM+R GV+P T
Sbjct: 527 TGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVT 586
Query: 157 YNCFFKEYRGRKDANGAMKLYRQM-KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
YN K + A +LY M C +I+TYNI++ N +D +++
Sbjct: 587 YNTILHGLFQTKRFSEAKELYLNMINSGTKC--DIYTYNIILNGLCKSNCVDEAFKMFQS 644
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ L L++ ++T++I L + + ++A F + GL+P VT+ + LI+
Sbjct: 645 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGS 704
Query: 276 LRTWRRLKKKLDEESITFGSEFQN 299
L + L +++ S+ N
Sbjct: 705 LEEFDSLFSAMEKNGTAPNSQMLN 728
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 134/293 (45%), Gaps = 11/293 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y SL+ CK R A F MI +G++P V TY +L++G + +L F
Sbjct: 302 PDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSF 361
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
D M G+ PD F+I Y++ ++D N M++ G+ P V
Sbjct: 362 ----------LDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVN 411
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GR++DAE +M+ GV+P+ +N A +L +M
Sbjct: 412 YGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEML 471
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +C PN +N LI + R+ R + + ++ + D SYT LI G C +
Sbjct: 472 DQGIC-PNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRT 530
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
EA + F M+ GL P +VT+ TL G + + L +++ + +T G
Sbjct: 531 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPG 583
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 143/345 (41%), Gaps = 64/345 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLG-------------------------------- 28
MP+ YT L+ G C R + A L
Sbjct: 158 MPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDK 217
Query: 29 ------EMIERGVEPNVVTYNVLLNGVCRRASLHPNER-FEKTIRNAEK----------- 70
EMI+RG+ P+VVTY +++G+C+ E F++ I N K
Sbjct: 218 PYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIH 277
Query: 71 -------------VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
+ +EM RG++PD ++ +L+ + + + + + M KGI P
Sbjct: 278 GYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKP 337
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V+TY ++ + G + + L MV NG+SP +N FF Y + AM ++
Sbjct: 338 KVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIF 397
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+M++ L PN+ Y LI L R+D +N + + ++ + L++GLC
Sbjct: 398 NKMRQHGLS-PNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCT 456
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
KW+ A + EM+++G+ P V F TL L + RRL
Sbjct: 457 VDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL 501
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 136/309 (44%), Gaps = 13/309 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y+ LI +C++ ++ G +++ G + + N LL G+C +R
Sbjct: 88 PNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCH------GKRV 141
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE---KGICPT 118
+ + + + M G PD S++I+L + + +L+ L+ M + + P
Sbjct: 142 GEAM---DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPN 198
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V +Y+ V+ + G+++ L EM+ G+ P TY + + A +++
Sbjct: 199 VVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQ 258
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
QM ++ PN +TYN LI ++++ + V ++ + L D +Y L++ LC+
Sbjct: 259 QMIDNGF-KPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKN 317
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
+ +EA +F MI KG+ P+ T+ L G L + E ++
Sbjct: 318 GRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIF 377
Query: 299 NYHFKPYRR 307
N F Y +
Sbjct: 378 NIFFSAYAK 386
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y ++++G + R A+ MI G + ++ TYN++LNG+C+
Sbjct: 582 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCK---------- 631
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+F + +G++ ++ +F+I++ + + + ++D + G+ P V T
Sbjct: 632 SNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVT 691
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V + L G +E+ + L M +NG +P+++ N + R D + A ++
Sbjct: 692 YRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLD 751
Query: 182 EDDLCVPNIHTYNILIGMFMA 202
E + V T ++L+ +F +
Sbjct: 752 ERNFSV-EASTTSLLMSIFTS 771
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 117/278 (42%), Gaps = 18/278 (6%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGV----CRRASLHPNERFEKTIRNAEKVFDEM 75
+D A + E++ +V +N LL V C AS F + +R
Sbjct: 30 LDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSD----- 84
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
+ P++ ++SI++ + R + + + G ++K LC R+
Sbjct: 85 ---KVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRV 141
Query: 136 EDAEE-LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD--LCVPNIHT 192
+A + LL M G P +Y K K A A++L M +D C PN+ +
Sbjct: 142 GEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVS 201
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
Y+I+I F ++D ++ + + D+ +YT +I GLC+ Q + A F +MI
Sbjct: 202 YSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMI 261
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ G P T+ L G + + W+ + + L+E S
Sbjct: 262 DNGFKPNNYTYNCLIHGYLS---IGKWKEVVQMLEEMS 296
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 138/291 (47%), Gaps = 26/291 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN--- 58
P+V YT LI+G+C + + R L +M++R V NV TYN+L++ +C++ L
Sbjct: 251 PDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDM 310
Query: 59 -----ERFEKT-----------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
ER ++ + A K+FD GI PDV S++I++ Y +
Sbjct: 311 RNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCK 370
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ +L N M K + P + TY+S++ LC GRI A EL + G SP+ T
Sbjct: 371 NNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVIT 430
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + A++L+ M E L PN+ +YNILI + R+D ++ +
Sbjct: 431 YNIMLDALCKIQLVDKAIELFNLMFERGL-TPNVSSYNILINGYCKSKRIDEAMNLFEEM 489
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
L D +Y LI GLC+ + A + F M + G +T+ L+
Sbjct: 490 HRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILF 540
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 135/286 (47%), Gaps = 11/286 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CKI A L +M + V PNVV YN++++G+C+ + +
Sbjct: 186 YGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCK----------DGLVT 235
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++ ++ RGI+PDV +++ ++H + + + L M ++ + V TY ++
Sbjct: 236 EARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILI 295
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G + A ++ M+ G P T+N Y D A KL+ E +
Sbjct: 296 DALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGI- 354
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++ +YNILI + NR+D ++N + +L ++ +Y+ LI GLC+ + A +
Sbjct: 355 TPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWE 414
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
F + + G P +T+ + L + ++ L + E +T
Sbjct: 415 LFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLT 460
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 44/306 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y ++ G CK + A +++ RG++P+V TY L++G C
Sbjct: 216 PNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQW------ 269
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R ++ +M R + +V +++I++ + + D N M E+G P + T
Sbjct: 270 ----REVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVT 325
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C + +A +L G++P +YN Y + A+ L+ +M
Sbjct: 326 FNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMN 385
Query: 182 E--------------DDLC--------------------VPNIHTYNILIGMFMALNRMD 207
D LC PN+ TYNI++ + +D
Sbjct: 386 YKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVD 445
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
E++N + L ++ SY +LI+G C+ ++ EA F EM + L+P VT+ L
Sbjct: 446 KAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLI 505
Query: 268 RGLIQS 273
GL +S
Sbjct: 506 DGLCKS 511
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y+SLI G CK RI A + + G PNV+TYN++L+ +C+
Sbjct: 391 PNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKI--------- 441
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A ++F+ M RG+ P+V+S++I+++ Y ++ + +++ M + + P T
Sbjct: 442 -QLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVT 500
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
Y ++ LC GRI A EL M G TYN F +
Sbjct: 501 YNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAF 543
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 132/307 (42%), Gaps = 46/307 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + LI +C + + A LG +++RG + N +T ++ G+C
Sbjct: 111 PSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLC----------I 160
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+R A + D + +G D ++ +++ + + + + L+ M+ + + P V
Sbjct: 161 NGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVI 220
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V LC G + +A +L ++V G+ P TY C + G +L M
Sbjct: 221 YNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMV 280
Query: 182 EDDLCVPNIHTYNILI------GMFMALNRM-----------DMV--------------- 209
+ ++ + N++TYNILI GM + M D+V
Sbjct: 281 DRNVNL-NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDV 339
Query: 210 ---REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
R++++ + D+ SY +LI G C+ + EA F +M K L P VT+ +L
Sbjct: 340 VEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSL 399
Query: 267 YRGLIQS 273
GL +S
Sbjct: 400 IDGLCKS 406
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 119/288 (41%), Gaps = 16/288 (5%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
+ ID A +I P+VV +N++L + + K A + +M +
Sbjct: 57 DAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKM----------KHYPTAISLSKQMGL 106
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
RGI P + + SI+++ Y + L + ++G T T+++K LC G +
Sbjct: 107 RGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRK 166
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A E +V G TY A +L +M E + PN+ YN+++
Sbjct: 167 ALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKM-EGQVVRPNVVIYNMIV 225
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
+ R++++ V G + D+ +YT LIHG C +W+E + +M+++ +
Sbjct: 226 DGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVN 285
Query: 258 PQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES-----ITFGSEFQNY 300
T+ L L + ML ++ + E +TF + Y
Sbjct: 286 LNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGY 333
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 136/266 (51%), Gaps = 11/266 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+S+I CK +D A L M++ GV P+ +TYN +L+G C +S P E
Sbjct: 233 LPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC--SSGQPKE- 289
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +MR G+EP+V ++S +++ + + + + M ++G+ P +A
Sbjct: 290 -------AIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++++ + G + + LL MVRNG+ P +N Y ++ + AM ++ +M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L PN+ Y +I + +D + + L ++ YT LIHGLC K
Sbjct: 403 RQHGL-NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
W +A + +EM+++G+ + F ++
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSI 487
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 143/298 (47%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ G+ K D A EM++RG+ P+VVTY+ ++ +C+
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK---------- 248
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A +V + M G+ PD +++ +LH Y + +P+ ++ L M+ G+ P V T
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ LC GR +A ++ M + G+ P TY + Y K A M +
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGY-ATKGALVEMHALLDLM 367
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ H +NILI + ++D +++ ++ L ++ Y +I LC+
Sbjct: 368 VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSV 427
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+A YF +MI++GL P + + +L GL D L ++ + I + F N
Sbjct: 428 DDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFN 485
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 143/298 (47%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ +YTSLI+G C ++ D AE + EM++RG+ N + +N +++ C+
Sbjct: 444 PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK---------- 493
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +EK+FD M G++PD+ +++ ++ A K + L M G+ P + T
Sbjct: 494 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 553
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R++DA L EMV +GVSP+ TYN + + A +LY +
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 613
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + TYNI++ N D ++ ++ ++L L+ ++ ++I L + +
Sbjct: 614 KSGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRM 672
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
EA F GL+P T+ + LI+ L L ++E + S N
Sbjct: 673 DEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLN 730
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 9/261 (3%)
Query: 7 YTSLIYGWCKINRI-DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+T L+ G C R D + L M E G P+V +YN LL G+C R ++ +
Sbjct: 130 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDE------NRSQEAL 183
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+ D+ R G PDV S++ VL+ + + + + M ++GI P V TY+S+
Sbjct: 184 ELLHMMADD-RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSI 242
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ LC ++ A E+L MV+NGV P TYN Y A+ ++M+ D +
Sbjct: 243 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 302
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
PN+ TY+ L+ R R+I++ + L D+ +Y L+ G K E
Sbjct: 303 -EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361
Query: 246 QYFVEMIEKGLLPQKVTFETL 266
M+ G+ P F L
Sbjct: 362 ALLDLMVRNGIQPDHHVFNIL 382
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 143/345 (41%), Gaps = 61/345 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PNV Y+SL+ CK R A + M +RG+EP++ TY LL G + +L
Sbjct: 304 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHAL 363
Query: 56 ---------HPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P+ ++ + A VF +MR G+ P+V + V+ V +
Sbjct: 364 LDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 423
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC------------------------ 132
+ ++ M ++G+ P + YTS++ LC+C
Sbjct: 424 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIF 483
Query: 133 -----------GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
GR+ ++E+L MVR GV P TYN + A KL M
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I TY LI + ++RMD ++ + S + ++ +Y +++ GL ++
Sbjct: 544 SVGV-KPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 602
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A + +V + + G + T+ + GL ++++ R+ + L
Sbjct: 603 AAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 7/216 (3%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
+A VFDE+ RG + + L +R H P ++ + N M G + PTV TY
Sbjct: 38 DARHVFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYA 96
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C C GR++ LG +V+ G A T+ K K + AM + + +
Sbjct: 97 ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV---KGSELGLDLDSYTMLIHGLCEKQK 240
C+P++ +YN L+ NR E+ + + +G D+ SY +++G ++
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+A + EM+++G+LP VT+ ++ L ++ +
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 20/278 (7%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V P V TY +L+ CR L + + N K +G D +F+ +L
Sbjct: 88 VTPTVHTYAILIGCCCRAGRL---DLGFAALGNVVK-------KGFRVDAITFTPLLKGL 137
Query: 95 SRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN---GV 150
+ ++D L M E G P V +Y +++K LC R ++A ELL M + G
Sbjct: 138 CADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGS 197
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
P +YN + D++ A Y +M + + +P++ TY+ +I MD
Sbjct: 198 PPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGI-LPDVVTYSSIIAALCKAQAMDKAM 256
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
E+ N + + + D +Y ++HG C + KEA +M G+ P VT+ +L L
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 316
Query: 271 IQSDMLRTWRRL-----KKKLDEESITFGSEFQNYHFK 303
++ R++ K+ L+ + T+ + Q Y K
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATK 354
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 25/193 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV--CRRASL---- 55
P++ Y +LI G+C+++R+D A EM+ GV PN++TYN++L G+ RR +
Sbjct: 549 PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 608
Query: 56 -----HPNERFEKTIRN--------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ E + N A ++F + + ++ + +F+I++ +
Sbjct: 609 YVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 668
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D G+ P V TY+ + + L G +E+ ++L M NG S +
Sbjct: 669 CGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRM 728
Query: 157 YNCFFKEYRGRKD 169
N ++ R D
Sbjct: 729 LNSIVRKLLQRGD 741
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 132/268 (49%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P Y +LI G+ + I+ A R EM+ G+E N++ +N LLNGVC+ +
Sbjct: 318 PEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAG------KM 371
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + ++ EM +G+EPD ++S+++ + R + + L+ MK++ + PTV T
Sbjct: 372 EKAL----EIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLT 427
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ LC CG ++ +L EMV NG+ P+A Y + + + +M+
Sbjct: 428 YSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR 487
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + +P++ YN LI F RM+ R + L + +Y I G + +
Sbjct: 488 EQGI-LPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 546
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ A +YF EM+ G+LP + L G
Sbjct: 547 EIADRYFNEMLSCGVLPNVGIYTALIEG 574
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 145/319 (45%), Gaps = 27/319 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y SLI G CK +D A + L EM +G+ P++VTYN+L++G+C+ + +
Sbjct: 632 LPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKN 691
Query: 61 F-------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
K A ++ +EM +RG+ PD ++++L+
Sbjct: 692 LFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCC 751
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ K + +LD M EKG TV ++ ++++ C G++++A LL EM+ P+
Sbjct: 752 KEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV 810
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY A +L+ +M+E ++ +P TY L+ + + M V ++
Sbjct: 811 TYTSLIDHNCKAGMMGEAKRLWLEMQERNV-MPTAKTYTSLLHGYHNIGNMSEVSALFEE 869
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ + D +Y ++I C + EAC+ E++ KG+ ++ L + L + +
Sbjct: 870 MVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEE 929
Query: 276 LRTWRRLKKKLDEESITFG 294
+L ++ E G
Sbjct: 930 FFEVLKLLNEIGESGFRLG 948
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 148/344 (43%), Gaps = 60/344 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y + I G+ K +++A+R+ EM+ GV PNV Y L+ G C+
Sbjct: 528 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCK---------- 577
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A VF + R + DV ++S+++H SR K + + ++EKG+ P T
Sbjct: 578 EGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFT 637
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC----------------FFKEYR 165
Y S++ C G ++ A +LL EM G++P TYN F +
Sbjct: 638 YNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE 697
Query: 166 GR-------------------KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR- 205
GR K+ A +L +M + P+ YN+++ +
Sbjct: 698 GRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV-PPDAFIYNVILNFCCKEEKF 756
Query: 206 ---MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
+D+ +E+ S + S+ LI G C+ K +EA EMIEK +P VT
Sbjct: 757 EKALDLFQEMLEKGFASTV-----SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVT 811
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEESI-----TFGSEFQNYH 301
+ +L ++ M+ +RL ++ E ++ T+ S YH
Sbjct: 812 YTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 855
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 139/291 (47%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT++I CK+ + A+R L EM E+G PN+VTYNV++ G+CR
Sbjct: 212 LPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR--------- 262
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A ++ M +G+ PD+ ++ I+++ + + + + L M + G+ P
Sbjct: 263 -ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 321
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ G IE A + EMV G+ + +N A+++ ++M
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + P+ TY++LI M E+ + +K +L + +Y+++I+GLC
Sbjct: 382 MEKGV-EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 440
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ EM+ GL P V + TL + + R + +++ E+ I
Sbjct: 441 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI 491
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 12/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +++ G+CK A + L EM+ RGV P+ YNV+LN C+ E+F
Sbjct: 703 PNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKE------EKF 756
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + +F EM +G V SF+ ++ Y ++ K Q + L M EK P T
Sbjct: 757 EKAL----DLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVT 811
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ C G + +A+ L EM V P+A+TY Y + + L+ +M
Sbjct: 812 YTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMV 871
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ TY ++I + + ++ + + + + + +Y LI LC+K+++
Sbjct: 872 AKGI-EPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEF 930
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
E + E+ E G T + RG
Sbjct: 931 FEVLKLLNEIGESGFRLGLPTCSVIARGF 959
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 141/316 (44%), Gaps = 26/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
P+ + Y+ LI G C+ + A L EM +R + P V+TY+V++NG+CR +L
Sbjct: 388 PDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAI 447
Query: 57 ----------PNERFEKTIRNAEK----------VFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN T+ A + + MR +GI PDV ++ ++ + +
Sbjct: 448 LREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCK 507
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + + L M E+ + P TY + + G +E A+ EM+ GV P+
Sbjct: 508 AKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGI 567
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + + + A ++R + + + ++ TY++LI +M I++ +
Sbjct: 568 YTALIEGHCKEGNVTEAFSVFRFILSRRV-LQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 626
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ L + +Y LI G C++ +A Q EM KG+ P VT+ L GL ++ +
Sbjct: 627 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 686
Query: 277 RTWRRLKKKLDEESIT 292
+ L ++ +T
Sbjct: 687 ERAKNLFDDIEGRGLT 702
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 124/269 (46%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ SL+ K N++++ + M V P+V TY +++ C+ +
Sbjct: 178 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGN------- 230
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+++A++V EM +G P++ ++++++ RA +++ M +KG+ P + T
Sbjct: 231 ---VKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYT 287
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C R +A+ +L EM+ G+ P TYN + + D A ++ +M
Sbjct: 288 YDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV 347
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ N+ +N L+ +M+ EI + + D +Y++LI G C Q
Sbjct: 348 ACGI-EANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNM 406
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A + EM ++ L P +T+ + GL
Sbjct: 407 ARAFELLDEMKKRKLAPTVLTYSVIINGL 435
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 6/229 (2%)
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
KVFD M + PDV +++ ++ + + + + L M EKG P + TY ++ L
Sbjct: 201 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGL 260
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C +++A EL MV G+ P TY+ + K + A + +M + L P
Sbjct: 261 CRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGL-KPE 319
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
TYN LI FM ++ I + + + +L + L++G+C+ K ++A +
Sbjct: 320 PITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 379
Query: 250 EMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRL----KKKLDEESITF 293
EM+EKG+ P T+ L G + +M R + L K+KL +T+
Sbjct: 380 EMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTY 428
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 37/200 (18%)
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
P + S + +L + +K +L + M + P V TYT+++ C G ++DA+ +
Sbjct: 178 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 237
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
L EM G C PN+ TYN++IG
Sbjct: 238 LLEMGEKG------------------------------------CSPNLVTYNVIIGGLC 261
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
+D E+ + L DL +Y +LI+G C +++ +EA +EMI+ GL P+ +
Sbjct: 262 RARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 321
Query: 262 TFETLYRGLI-QSDMLRTWR 280
T+ L G + Q D+ + +R
Sbjct: 322 TYNALIDGFMRQGDIEQAFR 341
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP K YTSL++G+ I + EM+ +G+EP+ +TY V+++ CR
Sbjct: 841 MPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCR--------- 891
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A K+ DE+ V+G+ V ++ ++ + + L LN + E G +
Sbjct: 892 -EGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLP 950
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T + + + G +++A E+L MV+ G + + + ++ + L +QM
Sbjct: 951 TCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YTSLI CK + A+R EM ER V P TY LL+G ++
Sbjct: 806 IPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS---- 861
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+F+EM +GIEPD ++ +++ Y R + + + KG+ +VA
Sbjct: 862 ------EVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVA 915
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++++ LC + +LL E+ +G T + + ++ + + A ++ R M
Sbjct: 916 AYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 975
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 83/174 (47%), Gaps = 17/174 (9%)
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+A S+VKC SC NG SP++ ++ YR A+ ++
Sbjct: 126 LAVLGSIVKCYRSC---------------NG-SPNSVIFDMLMDSYRKMGFLVEAVNVFL 169
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
K + P++ + N L+G + N++++ ++++ + ++ D+ +YT +I C+
Sbjct: 170 GPKNFEF-RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKV 228
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
K+A + +EM EKG P VT+ + GL ++ +L LK+ + ++ +
Sbjct: 229 GNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLV 282
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 132/268 (49%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P Y +LI G+ + I+ A R EM+ G+E N++ +N LLNGVC+ +
Sbjct: 309 PEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAG------KM 362
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + ++ EM +G+EPD ++S+++ + R + + L+ MK++ + PTV T
Sbjct: 363 EKAL----EIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLT 418
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ LC CG ++ +L EMV NG+ P+A Y + + + +M+
Sbjct: 419 YSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR 478
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + +P++ YN LI F RM+ R + L + +Y I G + +
Sbjct: 479 EQGI-LPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 537
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ A +YF EM+ G+LP + L G
Sbjct: 538 EIADRYFNEMLSCGVLPNVGIYTALIEG 565
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 12/263 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y SLI G CK +D A + L EM +G+ P++VTYN+L++G+C+
Sbjct: 623 LPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE------ 676
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A+ +FD++ RG+ P+ +++ ++ Y ++ P + L M +G+ P
Sbjct: 677 ----IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAF 732
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ C + E A +L EM+ G + S ++N + Y A L +M
Sbjct: 733 IYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEM 791
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E +PN TY LI M + +W ++ + +YT L+HG
Sbjct: 792 IEKQF-IPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGN 850
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
E F EM+ KG+ P K+T+
Sbjct: 851 MSEVSALFEEMVAKGIEPDKMTY 873
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 148/344 (43%), Gaps = 60/344 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y + I G+ K +++A+R+ EM+ GV PNV Y L+ G C+
Sbjct: 519 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCK---------- 568
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A VF + R + DV ++S+++H SR K + + ++EKG+ P T
Sbjct: 569 EGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFT 628
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC----------------FFKEYR 165
Y S++ C G ++ A +LL EM G++P TYN F +
Sbjct: 629 YNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE 688
Query: 166 GR-------------------KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR- 205
GR K+ A +L +M + P+ YN+++ +
Sbjct: 689 GRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV-PPDAFIYNVILNFCCKEEKF 747
Query: 206 ---MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
+D+ +E+ S + S+ LI G C+ K +EA EMIEK +P VT
Sbjct: 748 EKALDLFQEMLEKGFASTV-----SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVT 802
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEESI-----TFGSEFQNYH 301
+ +L ++ M+ +RL ++ E ++ T+ S YH
Sbjct: 803 YTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 846
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 141/316 (44%), Gaps = 26/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
P+ + Y+ LI G C+ + A L EM +R + P V+TY+V++NG+CR +L
Sbjct: 379 PDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAI 438
Query: 57 ----------PNERFEKTIRNAEK----------VFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN T+ A + + MR +GI PDV ++ ++ + +
Sbjct: 439 LREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCK 498
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + + L M E+ + P TY + + G +E A+ EM+ GV P+
Sbjct: 499 AKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGI 558
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + + + A ++R + + + ++ TY++LI +M I++ +
Sbjct: 559 YTALIEGHCKEGNVTEAFSVFRFILSRRV-LQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 617
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ L + +Y LI G C++ +A Q EM KG+ P VT+ L GL ++ +
Sbjct: 618 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 677
Query: 277 RTWRRLKKKLDEESIT 292
+ L ++ +T
Sbjct: 678 ERAKNLFDDIEGRGLT 693
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 122/276 (44%), Gaps = 22/276 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +++ G+CK A + L EM+ RGV P+ YNV+LN C+ E+F
Sbjct: 694 PNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKE------EKF 747
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + +F EM +G V SF+ ++ Y ++ K Q + L M EK P T
Sbjct: 748 EKAL----DLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVT 802
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ C G + +A+ L EM V P+A+TY Y + + L+ +M
Sbjct: 803 YTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMV 862
Query: 182 EDDLCVPNIHTYNILIGMFM----ALNRMDMVREIWNHVKG----SELGLDLDSYTMLIH 233
+ P+ TY ++I + + + EI VKG S L L + +++
Sbjct: 863 AKGI-EPDKMTYYVMIDAYCREGNVMEACKLKDEIL--VKGMPMKSGFRLGLPTCSVIAR 919
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
G EA + M++ G + + L G
Sbjct: 920 GFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 132/297 (44%), Gaps = 8/297 (2%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ SL+ K N++++ + M V P+V TY +++ C+ ++ +R
Sbjct: 187 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 246
Query: 62 EKTIRNAEKVFDE-------MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG 114
+ ++ DE M +G+ PD+ ++ I+++ + + + + L M + G
Sbjct: 247 LLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG 306
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
+ P TY +++ G IE A + EMV G+ + +N A+
Sbjct: 307 LKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKAL 366
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
++ ++M E + P+ TY++LI M E+ + +K +L + +Y+++I+G
Sbjct: 367 EIMQEMMEKGV-EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIING 425
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
LC + EM+ GL P V + TL + + R + +++ E+ I
Sbjct: 426 LCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI 482
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 23/234 (9%)
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
P + S + +L + +K +L + M + P V TYT+++ C G ++DA+ +
Sbjct: 187 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 246
Query: 142 LGE-----------------MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
L E MV G+ P TY+ + K + A + +M +
Sbjct: 247 LLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG 306
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
L P TYN LI FM ++ I + + + +L + L++G+C+ K ++A
Sbjct: 307 L-KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKA 365
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRL----KKKLDEESITF 293
+ EM+EKG+ P T+ L G + +M R + L K+KL +T+
Sbjct: 366 LEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTY 419
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 18/153 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP K YTSL++G+ I + EM+ +G+EP+ +TY V+++ CR
Sbjct: 832 MPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCR--------- 882
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL---HVYSRAHKPQLSLDK----LNFMKEK 113
E + A K+ DE+ V+G+ P + F + L V +R + ++D+ L M +
Sbjct: 883 -EGNVMEACKLKDEILVKGM-PMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKF 940
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
G + +V + ED++ LL +M
Sbjct: 941 GWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 973
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 154/317 (48%), Gaps = 27/317 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRR-----ASL 55
PN Y ++I GWCK+ R+D A + EM+ +G V+P V YN L+ G C + A L
Sbjct: 219 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 278
Query: 56 HPNERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ + E+ + A ++ +EM +G+ DV +++I+++ +
Sbjct: 279 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHC 338
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + +L+ M +G+ TV TYTS++ L G++++ ++L E VR G+ P
Sbjct: 339 KEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV 398
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
YN + + + A ++ +M++ + P+ TYN L+ L R+D R++ +
Sbjct: 399 LYNALINSHSTSGNIDRAFEIMGEMEKKRIA-PDDVTYNTLMRGLCLLGRVDEARKLIDE 457
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ + DL +Y LI G K K+A + EM+ KG P +T+ L +GL ++
Sbjct: 458 MTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 517
Query: 276 LRTWRRLKKKLDEESIT 292
+ K++ E IT
Sbjct: 518 GDDAENMVKEMVENGIT 534
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 46/272 (16%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y LI G CK + A M RGV VVTY L+ + ++
Sbjct: 326 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQ-------- 377
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++ +K+FDE RGI PD+ ++ +++ +S + + + + M++K I P TY
Sbjct: 378 --VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTY 435
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++++ LC GR+++A +L+ EM + G+ P TYN Y + D A+++ +M
Sbjct: 436 NTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 495
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P + TYN LI GLC+ +
Sbjct: 496 KGFN-PTLLTYN-----------------------------------ALIQGLCKNGQGD 519
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+A EM+E G+ P T+ +L GL D
Sbjct: 520 DAENMVKEMVENGITPDDSTYISLIEGLTTED 551
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 6/218 (2%)
Query: 53 ASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
ASLHP + D R+R + T+F+I+L A KP +L+ L M
Sbjct: 124 ASLHPLLSALPSAPAFALFADMFRLR-LPLCTTTFNIMLRHLCSAGKPARALELLRQMPR 182
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEM-VRNGVSPSAETYNCFFKEYRGRKDAN 171
P TY +V+ CS GR++ A +++ EM R G++P+ TY + +
Sbjct: 183 ----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVD 238
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A+K++ +M P YN LIG + ++D + + + + + +Y +L
Sbjct: 239 EAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 298
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+H L + EA + EM KGL T+ L G
Sbjct: 299 VHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILING 336
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC 50
P + Y +LI G CK + D AE + EM+E G+ P+ TY L+ G+
Sbjct: 500 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 548
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 141/299 (47%), Gaps = 16/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++I G CK +DMAE +M+++GV+P+ VTYN +++G+C+
Sbjct: 258 PNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCK---------- 307
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + AE VF +M RG++PD +++ ++ +A + M +KG+ P T
Sbjct: 308 AQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLT 367
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ LC ++ AE + +M+ GV P+ TYNC Y ++ ++M
Sbjct: 368 YTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMS 427
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
DL P++ TY +L+ + + R +++ + + + Y +++HG +K
Sbjct: 428 AHDL-EPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFGS 295
E M+ G+ P F T+ R +I M + ++ L +T+G+
Sbjct: 487 SEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGT 545
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 141/275 (51%), Gaps = 11/275 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN ++ SL+YG C +++ + E EM+ +G+ P++V +N +L +C+
Sbjct: 573 PNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCK---------- 622
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A ++ D M G++PDV S++ ++ + A + ++ L+ M G+ P + +
Sbjct: 623 EGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVS 682
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C GRI++A L EM+R GV+P ETYN + A +LY M
Sbjct: 683 YNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMI 742
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + +I TY+I++ F N D +I+ + +L LD+ ++ ++I GL + +
Sbjct: 743 KSRK-LWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRK 801
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
++A F + GL+P VT+ + LI+ L
Sbjct: 802 EDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSL 836
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 147/375 (39%), Gaps = 94/375 (25%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNG---------VCRR 52
P+ YT +I G CK +D AE +MI++GV+PN TYN L++G V +R
Sbjct: 363 PDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQR 422
Query: 53 ASLHPNERFEKTI----------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E + A +FD M +GI+P VT + I+LH Y +
Sbjct: 423 IKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGK 482
Query: 97 AHKPQLSLDKLNFM-----------------------------------KEKGICPTVAT 121
D LN M K++G+ P V T
Sbjct: 483 KGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVT 542
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN----------------------- 158
Y +++ LC GR++DA +M+ GV+P+ +N
Sbjct: 543 YGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEML 602
Query: 159 --------CFFKEYRGRKDANGAMKLYRQMKEDDLCV---PNIHTYNILIGMFMALNRMD 207
FF G + R++ + +C+ P++ +YN LI +RMD
Sbjct: 603 NQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMD 662
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
++ + + + L ++ SY L+HG C+ + A F EM+ KG+ P T+ T+
Sbjct: 663 EAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTIL 722
Query: 268 RGLIQSDMLRTWRRL 282
GL +S R L
Sbjct: 723 NGLFRSGRFSEAREL 737
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 129/281 (45%), Gaps = 14/281 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +I G+ ++D A EM GV P+VVTYN +++G+C+
Sbjct: 191 PDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCK---------- 237
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + AE VF +M +G++P+ +++ ++ +A + ++ M +KG+ P+ T
Sbjct: 238 AQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVT 297
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC ++ AE + +M+ GV P TYN + + A +++QM
Sbjct: 298 YNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMI 357
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+ TY I+I +D ++ + + + +Y LIHG +W
Sbjct: 358 DKGV-KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQW 416
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+E Q EM L P T+ L L ++ R L
Sbjct: 417 EEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSL 457
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 137/302 (45%), Gaps = 35/302 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV------------ 49
P+ Y+ +I +C+I R+++ G +++ G + + N LL G+
Sbjct: 82 PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141
Query: 50 ---------CRRASLHPNERFEKTI--RNAEKVFD--EMRVRGIE----PDVTSFSIVLH 92
CR + N + R AE+ + M V G + PDV S++IV++
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201
Query: 93 VYSRAHKPQLSLDKL-NFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ + +DK + E G+ P V TY +++ LC ++ AE++ +MV GV
Sbjct: 202 GFFNEGQ----VDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVK 257
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P+ TYN ++ + A ++++M + + N+ TYN +I +D
Sbjct: 258 PNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNV-TYNTIIDGLCKAQAVDRAEG 316
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
++ + + D +Y +I GLC+ Q +A F +MI+KG+ P +T+ + GL
Sbjct: 317 VFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLC 376
Query: 272 QS 273
++
Sbjct: 377 KA 378
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 26/224 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-HPNER 60
PN+ Y +L++G+CK RID A EM+ +GV P V TYN +LNG+ R E
Sbjct: 678 PNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL 737
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ I++ A K+F + ++ D+ +F+I++ +
Sbjct: 738 YVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFK 797
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + ++D + G+ P+V TY + + L G +E+ + L M ++G +P++
Sbjct: 798 GGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHM 857
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
N ++ R + A ++ E + + T ++LI +F
Sbjct: 858 LNALIRKLLDRGEIPRAGAYLSKLDEKNFSL-EASTTSMLISLF 900
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 114/268 (42%), Gaps = 51/268 (19%)
Query: 52 RASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA---HKPQLSLDKLN 108
RA++ + +A K+FDE+ + V + + +L V SRA +L++ + N
Sbjct: 11 RAAIGRARSGNLGLHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFN 70
Query: 109 FMK---EKGICPTVATYTSVVKCLCSCGRIE----------------------------- 136
M + P TY+ V+ C C GR+E
Sbjct: 71 RMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLC 130
Query: 137 DAEE-------LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM--KEDDLCV 187
D + LL +M G +YN K R+ A A +L M +D C
Sbjct: 131 DTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCS 190
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKEAC 245
P++ +YNI+I F ++D ++ E+G+ D+ +Y +I GLC+ Q+ A
Sbjct: 191 PDVVSYNIVINGFFNEGQVDKAYSLF-----LEMGVSPDVVTYNTIIDGLCKAQEVDRAE 245
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQS 273
F +M+EKG+ P VT+ T+ GL ++
Sbjct: 246 DVFQQMVEKGVKPNNVTYNTIIDGLCKA 273
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 141/310 (45%), Gaps = 46/310 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y +LI G CK + A+R L EM+ G+ PN T+N +L CR+
Sbjct: 292 PGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRK--------- 342
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP---- 117
+ + AE+VF+EM RG+ PD+ SFS ++ V+SR + +L MK G+ P
Sbjct: 343 -EDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVI 401
Query: 118 -------------------------------TVATYTSVVKCLCSCGRIEDAEELLGEMV 146
V TY +++ LC ++DA+EL EMV
Sbjct: 402 YTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMV 461
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
GV P T Y + A+ L+ M L P++ TYN L+ F + M
Sbjct: 462 ERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSL-KPDVVTYNTLMDGFCKVGEM 520
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ +E+W + E+ S+++LI+G C EA + + EM EKG+ P VT T+
Sbjct: 521 EKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTI 580
Query: 267 YRGLIQSDML 276
+G +++ L
Sbjct: 581 IKGYLRAGNL 590
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 11/258 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ T+LI+G+CK + A M R ++P+VVTYN L++G C+ +
Sbjct: 467 PDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEME----- 521
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A++++ +M R I P SFSI+++ + + + MKEKGI PT+ T
Sbjct: 522 -----KAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVT 576
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++K G + A + L M+ GV P TYN + ++ + A L M+
Sbjct: 577 CNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNME 636
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L +PN+ TYN ++G F RM + + + + D +YT LI+G K
Sbjct: 637 ERGL-LPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNM 695
Query: 242 KEACQYFVEMIEKGLLPQ 259
KEA + EM+++G +P
Sbjct: 696 KEAFRVHDEMLQRGFVPD 713
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 146/305 (47%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT LI G+C+ + + A + EM+ERG +VVTYN LLNG+CR
Sbjct: 396 VPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCR--------- 446
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K + +A+++F EM RG+ PD + + ++H Y + +L M + + P V
Sbjct: 447 -GKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVV 505
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ C G +E A+EL +M+ + PS +++ + + A +L+ +M
Sbjct: 506 TYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEM 565
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
KE + P + T N +I ++ + + N + + D +Y LI+ +++
Sbjct: 566 KEKGI-KPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEEN 624
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL-----IQSDMLRTWRRLKKKLDEESITFGS 295
+ A M E+GLLP VT+ + G +Q + + + K ++ + T+ S
Sbjct: 625 FDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTS 684
Query: 296 EFQNY 300
Y
Sbjct: 685 LINGY 689
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 139/283 (49%), Gaps = 11/283 (3%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
+L+ K+ +D+A + + ++ G NV T N+++N +C+ L N
Sbjct: 194 ALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLD----------NV 243
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
EM +G+ D+ +++ +++ Y R + ++ M KG+ P + TY +++
Sbjct: 244 GVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALING 303
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC G E A+ +L EM+ G+ P+A T+N E ++D A +++ +M + + VP
Sbjct: 304 LCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGV-VP 362
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
++ +++ ++G+F + + +KG L D YT+LI+G C A +
Sbjct: 363 DLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMR 422
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM+E+G + VT+ TL GL + ML L K++ E +
Sbjct: 423 NEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 465
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y +++ G+ + R+ AE L +MI++G+ P+ TY L+NG + ++
Sbjct: 641 LPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNM----- 695
Query: 61 FEKTIRNAEKVFDEMRVRGIEPD 83
+ A +V DEM RG PD
Sbjct: 696 -----KEAFRVHDEMLQRGFVPD 713
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 146/286 (51%), Gaps = 12/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YT +I G CK ++D A +M+++ + P+VVTY L++G+ +
Sbjct: 203 PNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGK---------- 252
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFM-KEKGICPTVA 120
++ ++ A +F+E R +G P V +++ ++ + + + +L + M +E + P +
Sbjct: 253 QRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMF 312
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY++++ L R E A EL EM+ G SP TYN + AM+++R+M
Sbjct: 313 TYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKM 372
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++C PN+ TY +LI F ++R+ ++ ++G L D ++T +I LC++ +
Sbjct: 373 GVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESR 432
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EA + F E I K P V F T+ G + + ++L ++
Sbjct: 433 IDEAHELF-ESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRM 477
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 131/269 (48%), Gaps = 14/269 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMI-ERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P V Y ++I G CK RI+ A +M+ E ++P++ TY+ L+NG L+ + R
Sbjct: 273 PTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALING------LNLSNR 326
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTV 119
EK A ++++EM G PDV +++ +L ++ +++ M +C P V
Sbjct: 327 GEK----AYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNV 382
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYT ++ C R+ DA +L EM + P A T+ ++ + A +L+
Sbjct: 383 ITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFES 442
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ + C P+ +N ++ + + R+D +++ + + S L +YT L+ G C
Sbjct: 443 IGK--TCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTG 500
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++ +A + EMIE G P++ E + R
Sbjct: 501 RYSDALIMYHEMIEMGFPPERHLAELVDR 529
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 16/267 (5%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
+L+ + K R++ A F ++ EP+ V+YN L+NG + ++ A
Sbjct: 107 NLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGD----------VKKA 156
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI-CPTVATYTSVVK 127
+F EM+ GI + S +IVL K ++ + M GI P + +YT ++
Sbjct: 157 LALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDM--SGIFSPNLISYTIMID 213
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
LC +++ A L +MV + P TY ++ A L+ + + C
Sbjct: 214 GLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG-CH 272
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNH-VKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P + TYN +I R++ +++ V+ L D+ +Y+ LI+GL + ++A +
Sbjct: 273 PTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYE 332
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ EM++ G P VT+ TL GL +S
Sbjct: 333 LYEEMLDTGCSPDVVTYNTLLDGLCKS 359
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 9/154 (5%)
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
R+EDA ++N P +YN + D A+ L+ +MK+ + V + ++
Sbjct: 117 RVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV--LRSH 174
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
NI++ + ++ M E++ + G +L SYT++I GLC+ +K +A F +M++
Sbjct: 175 NIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVD 233
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
K + P VT+ L GL + RR+K+ D
Sbjct: 234 KAIYPDVVTYGALIDGLGKQ------RRVKEAYD 261
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 61/152 (40%), Gaps = 46/152 (30%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +T++I CK +RID A E I + +P+ V +N +L G C+
Sbjct: 414 LPDAVTFTTVIQKLCKESRIDEAHELF-ESIGKTCKPDSVLFNTMLAGYCKITR------ 466
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I +A+K+ D M LD G PT+A
Sbjct: 467 ----IDDAKKLHDRM----------------------------LD-------SGCAPTLA 487
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
TYT++V C GR DA + EM+ G P
Sbjct: 488 TYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 135/293 (46%), Gaps = 14/293 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V YT+++ G CK R A + L EM ++G PN+ TYNV++ G+C
Sbjct: 109 LPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE--------- 159
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ + A+K+ +EM VRG PDV +++ + + + + F+ + P V
Sbjct: 160 -ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVD---EARKFLARMPVTPDVV 215
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+YT+V+ LC G ++ A +L M G +P TY+ + + AM L M
Sbjct: 216 SYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 275
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C PN+ YN L+G L + ++ ++ D+ SY I GLC+ ++
Sbjct: 276 LKLG-CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 334
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
K+A F M+E+G P ++ L ++ +L + DE F
Sbjct: 335 VKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALF 387
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 142/323 (43%), Gaps = 38/323 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+V YT++I G CK +D A R L M RG P+VVTY+ L++G C+
Sbjct: 212 PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 271
Query: 52 -----RASLHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ PN + I AE + EM RG PDV S++ + +
Sbjct: 272 LDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 331
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATY----------TSVVKCLCSCGRIEDAEELLGEMV 146
A + + + + M E+G P ++Y T ++ LC GR ++A L +++
Sbjct: 332 AERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVL 391
Query: 147 RNGV-SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+ P YN + R+ + A+++++QM E + C N+ T+NIL+ +R
Sbjct: 392 DEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC--NVVTWNILVHGLCVDDR 449
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ + + D +Y L+ +C+ K A + F E ++ G +P VT+
Sbjct: 450 LSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSA 509
Query: 266 LYRGLIQSDMLRTWRRLKKKLDE 288
L GL+ +M L KL E
Sbjct: 510 LITGLVHENMAEEAYLLFTKLVE 532
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 39/262 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y S I G CK +R+D A +FL M V P+VV+Y ++NG+C+ L
Sbjct: 180 PDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLD----- 231
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ D M RG PDV ++S ++ + + + + ++ L+ M + G P +
Sbjct: 232 -----SASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 286
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ L G I AE++L EM R G +P +YN + A ++ +M
Sbjct: 287 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 346
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C PN +Y++LI +D+ YT+L+ GLC+ ++
Sbjct: 347 ERG-CTPNASSYSMLI-------------------------VDILLYTVLLDGLCKGGRF 380
Query: 242 KEACQYFVEMIEKGLLPQKVTF 263
EAC F +++++ + V F
Sbjct: 381 DEACALFSKVLDEKICEPDVFF 402
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 122/271 (45%), Gaps = 14/271 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y L+ + +R D A EMI++ +P+ T+ +LL G+CR L
Sbjct: 6 NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLE------ 59
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A K+ M+ G PD ++ ++ YS+A + L M + PTV TY
Sbjct: 60 ----KARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTY 115
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T++V LC R DA +LL EM G SP+ TYN + + + A K+ +M
Sbjct: 116 TNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAV 175
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P++ TYN I +R+D R+ + + D+ SYT +I+GLC+
Sbjct: 176 RGY-FPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP---DVVSYTTVINGLCKSGDLD 231
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
A + M +G P VT+ +L G +
Sbjct: 232 SASRMLDHMSNRGCTPDVVTYSSLIDGFCKG 262
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 3/209 (1%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G E +V +++ +L +R H+ + M +K P T+ +++ LC ++E A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY-NILI 197
+LLG M G P YN Y KD A K +M ++ C+P + TY NI+
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH-CLPTVVTYTNIVD 120
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
G+ A D V+ + + ++ ++ +Y +++ GLCE++K EA + EM +G
Sbjct: 121 GLCKAERTRDAVK-LLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYF 179
Query: 258 PQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
P VT+ + +GL + D + R+ ++
Sbjct: 180 PDVVTYNSFIKGLCKCDRVDEARKFLARM 208
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 98/248 (39%), Gaps = 54/248 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPN----------VVTYNVLLNGVCR 51
P+V Y + I G CK R+ A+ M+ERG PN ++ Y VLL+G+C+
Sbjct: 317 PDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCK 376
Query: 52 RASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR---------AHKPQL 102
RF++ KV DE + EPDV ++++L + + HK L
Sbjct: 377 GG------RFDEACALFSKVLDE---KICEPDVFFYNVMLDSHCKRRQIDKALQIHKQML 427
Query: 103 SLDKLNF-------------------------MKEKGICPTVATYTSVVKCLCSCGRIED 137
+ N M ++G P TY ++V +C CG+
Sbjct: 428 EKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAA 487
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A EL E V+ G P TY+ A A L+ ++ E VP+ T +L
Sbjct: 488 ALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRW-VPDDKTLGLLH 546
Query: 198 GMFMALNR 205
LN+
Sbjct: 547 RKLKLLNK 554
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+Y L+ L + + +A F EMI+K P TF L RGL +S+ L R+L ++
Sbjct: 9 TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68
Query: 287 DEESITFGSEFQNYHFKPYRR 307
E N Y +
Sbjct: 69 KEMGCVPDDAIYNALISGYSK 89
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 141/293 (48%), Gaps = 26/293 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y S I CK RI+ A L +++E G+ PN VTYN L++G C + L +
Sbjct: 285 PDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAY 344
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
EK I AE + EMR +G+EPDV +++I ++ Y R
Sbjct: 345 RDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCR 404
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +L + M EK I PTV TYTS++ R+ +AEE + ++ G+ P
Sbjct: 405 CGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIM 464
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N + + + A +L ++M ++ VP+ T+N L+ + +++ +++ + +
Sbjct: 465 FNALIDGHCVNGNIDRAFQLLKEM-DNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEM 523
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
K + D SY LI G ++ K+A + F EM+ G P +T+ L +G
Sbjct: 524 KERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQG 576
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 123/247 (49%), Gaps = 11/247 (4%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
I MA EM++ ++ ++VT+N+++N +CR E + A+ M V G
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCR----------EGKWKKAKDFIGHMEVYG 247
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
++P+V +++ V++ Y K + + MK+K + P TY S + LC RIE+A
Sbjct: 248 VKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEAS 307
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
+L +++ +G+ P+A TYN + D + A YR + V ++ TYN+LI
Sbjct: 308 GVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFA-YRDEMMNRGIVASVFTYNLLIHA 366
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
R++ ++ ++ + D+ +Y + I+G C K+A F EM+EK + P
Sbjct: 367 LFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPT 426
Query: 260 KVTFETL 266
T+ +L
Sbjct: 427 VETYTSL 433
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 86/157 (54%), Gaps = 10/157 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ M+ +LI G C ID A + L EM V P+ VT+N L+ G CR
Sbjct: 459 LPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCR--------- 509
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ + A+K+ DEM+ RGI+PD S++ ++ YS+ + +L+ + M G PT+
Sbjct: 510 -ERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLL 568
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
TY ++++ G + AEELL EM G++P TY
Sbjct: 569 TYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 45/256 (17%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICP----------------------------- 117
F ++L Y + KP +L+ LN MKE I P
Sbjct: 150 FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMV 209
Query: 118 ------TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
++ T+ ++ LC G+ + A++ +G M GV P+ TYN Y R
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFE 269
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A K+++ MK+ +L P+ +TYN I R++ + + S L + +Y L
Sbjct: 270 AASKIFKTMKDKNL-KPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNAL 328
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI-------QSDMLRTWRRLKK 284
I G C K +A Y EM+ +G++ T+ L L DM++ R +K
Sbjct: 329 IDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMR--EK 386
Query: 285 KLDEESITFGSEFQNY 300
++ + +T+ + Y
Sbjct: 387 GVEPDVVTYNIQINGY 402
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 76/129 (58%), Gaps = 10/129 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + +L+ G+C+ +++ A++ L EM ERG++P+ ++YN L++G +R +
Sbjct: 494 VPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDM----- 548
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++A +VFDEM G +P + +++ ++ YS+ + + + L M+ KGI P +
Sbjct: 549 -----KDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDS 603
Query: 121 TYTSVVKCL 129
TY V++ +
Sbjct: 604 TYLYVIEAM 612
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 137/270 (50%), Gaps = 13/270 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + + LI G+C+ + + A L EM +R + P+ V+Y ++NG+C
Sbjct: 312 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHC--------- 362
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A K+ ++M G++P+V +S ++ Y+ + + + L+ M G+ P +
Sbjct: 363 -KDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFC 421
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ CL G++E+A L E+ G+ P A T+ F Y A K + +M
Sbjct: 422 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 481
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L +PN Y +LI G F A N M+ + I+ H+ + D+ + + IHGL + +
Sbjct: 482 DHGL-MPNNPLYTVLINGHFKAGNLMEAL-SIFRHLHALGVLPDVQTCSAFIHGLLKNGR 539
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+EA + F E+ EKGL+P T+ +L G
Sbjct: 540 VQEALKVFSELKEKGLVPDVFTYSSLISGF 569
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 139/286 (48%), Gaps = 12/286 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+SLI G+CK ++ A EM +G+ PN+ YN L++G+C+
Sbjct: 556 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD------ 609
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I+ A K+FD M +G+EPD ++S ++ Y ++ + + M KG+ P
Sbjct: 610 ----IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 665
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++V C G +E A L EM++ G + + ++N Y A +L+++M
Sbjct: 666 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEM 724
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P+ TY +I +M+ ++ ++ L +D +YT L++G + +
Sbjct: 725 IAKQI-MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQ 783
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
E F +M+ KG+ P +VT+ + + D L +L+ ++
Sbjct: 784 SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 829
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 12/290 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + + I G+ K ++ A ++ EM++ G+ PN Y VL+NG + +L
Sbjct: 452 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL------ 505
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F + G+ PDV + S +H + + Q +L + +KEKG+ P V T
Sbjct: 506 ----MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 561
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ C G +E A EL EM G++P+ YN D A KL+ M
Sbjct: 562 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 621
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L P+ TY+ +I + + +++ + + Y L+HG C++
Sbjct: 622 EKGL-EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 680
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++A F EM++KG ++F TL G +S ++ +L +++ + I
Sbjct: 681 EKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 729
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 126/268 (47%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ ++LI G+ + ID R M+ G+ N++TYNVL++G+C +F
Sbjct: 242 PDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLC---------KF 292
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + AE + M G +P+ +F +++ Y R H +L+ L+ M+++ + P+ +
Sbjct: 293 GKMEKAAE-ILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 351
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC C + A +LL +M +G+ P+ Y+ Y A +L M
Sbjct: 352 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMS 411
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I YN +I +M+ ++G L D ++ I G + K
Sbjct: 412 CSGV-APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 470
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA +YF EM++ GL+P + L G
Sbjct: 471 TEAAKYFDEMLDHGLMPNNPLYTVLING 498
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 146/305 (47%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I G C + +A + L +M G++PNVV Y+ L+ G
Sbjct: 346 VPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYAS--------- 396
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I A ++ D M G+ PD+ ++ ++ S+A K + + L ++ +G+ P
Sbjct: 397 -EGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAV 455
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ + + G++ +A + EM+ +G+ P+ Y + + A+ ++R +
Sbjct: 456 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL 515
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P++ T + I + R+ ++++ +K L D+ +Y+ LI G C++ +
Sbjct: 516 HALGV-LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 574
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
++A + EM KG+ P + L GL +S ++ R+L +K L+ +S+T+ +
Sbjct: 575 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 634
Query: 296 EFQNY 300
Y
Sbjct: 635 MIDGY 639
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 143/299 (47%), Gaps = 17/299 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V+ ++ I+G K R+ A + E+ E+G+ P+V TY+ L++G C++
Sbjct: 521 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE------ 574
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++ DEM ++GI P++ ++ ++ ++ Q + + M EKG+ P
Sbjct: 575 ----VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 630
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY++++ C + +A L EM GV P + YN D AM L+R+M
Sbjct: 631 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 690
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ ++N LI + ++ +++ + ++ D +YT +I C+ K
Sbjct: 691 LQKGFAT--TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 748
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL---YRGLIQSDMLRTW--RRLKKKLDEESITFG 294
+EA F EM E+ L+ VT+ +L Y L QS + + + K + + +T+G
Sbjct: 749 MEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYG 807
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 44/277 (15%)
Query: 27 LGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTS 86
L M E+G+ PN TY ++ G+CR K + A+ F+EM+ G++PD +
Sbjct: 197 LRSMGEKGLVPNTYTYTIITAGLCR----------AKRMNEAKLTFEEMQKTGLKPDYNA 246
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
S ++ + R L + M GI + TY ++ LC G++E A E+L M+
Sbjct: 247 CSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMI 306
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV------------------- 187
G P++ T+ + Y + A++L +M++ +L
Sbjct: 307 TLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLS 366
Query: 188 ---------------PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
PN+ Y+ LI + + R++ R + + + S + D+ Y +I
Sbjct: 367 LANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII 426
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
L + K +EA Y +E+ +GL P VTF G
Sbjct: 427 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 463
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 13/225 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ +LI G+CK +I A + EMI + + P+ VTY +++ C+ +
Sbjct: 701 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKM----------E 750
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +F EM+ R + D +++ +++ Y++ + M KG+ P TY V+
Sbjct: 751 EANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVI 810
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C + +A +L E+V G+ ++ R+D A KL +M E L
Sbjct: 811 YAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGL- 869
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
P++ + L+ F +MD ++ VK LGL D+ T++
Sbjct: 870 KPSLAACSTLVRSFHEAGKMDEATRVFEGVK--SLGLVPDTTTLI 912
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 1/182 (0%)
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
+ L M EKG+ P TYT + LC R+ +A+ EM + G+ P + +
Sbjct: 195 NSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGF 254
Query: 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
D + +++ M + + N+ TYN+LI +M+ EI + +
Sbjct: 255 MREGDIDEVLRIKDVMVSCGIPI-NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN 313
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
++ +LI G C + A + EM ++ L+P V++ + GL L +L +
Sbjct: 314 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 373
Query: 285 KL 286
K+
Sbjct: 374 KM 375
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +IY CK + + A + E++ +G+ +++L+ +C+R L
Sbjct: 801 PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDL------ 854
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+ DEM G++P + + S ++ + A K + +K G+ P T
Sbjct: 855 ----TEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 910
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMV 146
+V + EDA L+ ++V
Sbjct: 911 LIDLVNGNLNDTDSEDARNLIKQLV 935
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 153/313 (48%), Gaps = 22/313 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++K +T L+YGWCK ++ A+ L +M E G EP++V YN LL+G +
Sbjct: 218 PSLKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMG----- 272
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A + E+R +G +P+ TS++I++ K ++ M+ G V T
Sbjct: 273 -----DAFDLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVT 327
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++V C I+ ++L M++ G P+ TY + +++ +L +M+
Sbjct: 328 YTALVSGFCKWRMIDKGYQILQSMIQKGHMPNQLTYLHLMLAHEKKEELEECKELMGEMQ 387
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C+P++ YN++I + L ++ + WN ++ S L LD++ ++I+G
Sbjct: 388 KIG-CIPDLSIYNVVIRLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYL 446
Query: 242 KEACQYFVEMIEKGLLP--QKVTFETLYRGLIQSDMLRTWRRL---------KKKLDEES 290
EACQYF EM+E+GLL Q + L L++ + L + L + +D +
Sbjct: 447 VEACQYFKEMVERGLLSSRQYGILKDLLNALLRGEKLELAKDLWSCIVTKGCELNVDSWT 506
Query: 291 ITFGSEFQNYHFK 303
I + F N H K
Sbjct: 507 IWIHALFSNGHVK 519
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 108/244 (44%), Gaps = 47/244 (19%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
++ A L EM + G EP+ + LL+ +C+ S ++ A +F++MRVR
Sbjct: 167 VNKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGS----------VKEAASLFEDMRVR- 215
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
P + F+ +L+ + + K + L M+E G P + Y +++ + G++ DA
Sbjct: 216 FSPSLKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAF 275
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
+LL E+ R G P+A +Y + G++ + AM+++ +M E C ++ T
Sbjct: 276 DLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEM-ERSGCDADVVT------- 327
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
YT L+ G C+ + + Q MI+KG +P
Sbjct: 328 ----------------------------YTALVSGFCKWRMIDKGYQILQSMIQKGHMPN 359
Query: 260 KVTF 263
++T+
Sbjct: 360 QLTY 363
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 137/273 (50%), Gaps = 21/273 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +L+ G C R+ A+ MI+ G P+VVTYN LL+G C+ L
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELD----- 62
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+FD RG PDV +++ +++ + +A K + L M + + P V T
Sbjct: 63 -----EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVT 117
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF----KEYRGRKDANGAMKLY 177
Y S+V LC GR+++A L+ V G SP+ TY+ +E RG + A+KL+
Sbjct: 118 YNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSE---ALKLF 171
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+ + P + TYNILI + +R++ E+++ + L D +YT+ I GLC+
Sbjct: 172 GSVLKQGY-EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCK 230
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ ++A +M EKG +P V+ + GL
Sbjct: 231 AGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 263
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 143/308 (46%), Gaps = 27/308 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA------- 53
+P+V Y +LI G+CK +++D A+R L M+ + P+VVTYN L+NG+C+
Sbjct: 77 VPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARM 136
Query: 54 -----SLHPNE-----------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
PN R + + A K+F + +G EP+V +++I++ +
Sbjct: 137 LIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKE 196
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ + + + + + G+ P TYT + LC GR+EDA +L +M G P ++
Sbjct: 197 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSH 256
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
N K + A L M E C PN ++N LI + + +
Sbjct: 257 NAVINGLCKEKRVDEAEVLLSGM-EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 315
Query: 218 GSELGLDLDSYTMLIHGLC---EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ + +Y +L+ GLC ++ + KEA F MIEKG +P VT+ L GL ++
Sbjct: 316 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG 375
Query: 275 MLRTWRRL 282
L RRL
Sbjct: 376 KLDDARRL 383
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 143/303 (47%), Gaps = 48/303 (15%)
Query: 2 PNVKMYTSLIYGWCK-INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
PNV Y++LI G C+ + + A + G ++++G EP V TYN+L++G+ + + NE
Sbjct: 145 PNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRV--NEA 202
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
FE +F + G+EPD ++++ + +A + + +L L M EKG P V
Sbjct: 203 FE--------LFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVV 254
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++ +V+ LC R+++AE LL M G SP+A ++N AM +++M
Sbjct: 255 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 314
Query: 181 KE--------------DDLC-----------------------VPNIHTYNILIGMFMAL 203
+ D LC VP++ TY+ LI
Sbjct: 315 LKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKA 374
Query: 204 NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
++D R + ++ ++ +Y LI GLC +K EA + FV M+EKG +P +T+
Sbjct: 375 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITY 434
Query: 264 ETL 266
T+
Sbjct: 435 GTI 437
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 145/308 (47%), Gaps = 27/308 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +L++G+CK+ +D A + ++RG P+VVTYN L+NG C+ L +R
Sbjct: 43 PDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRI 102
Query: 62 EKTIRNAEKV------------------FDEMRV----RGIEPDVTSFSIVLHVYSRAHK 99
+ + + V DE R+ +G P+V ++S ++ R +
Sbjct: 103 LQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELR 162
Query: 100 P-QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
+L + ++G P V TY ++ L R+ +A EL +V++G+ P A TY
Sbjct: 163 GVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYT 222
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
F A+ + + M E CVP++ ++N +I R+D + + ++
Sbjct: 223 VFIDGLCKAGRVEDALLMLKDMDEKG-CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA 281
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
+ S+ LI G C KWK+A F EM+++G+ P VT+ L GL ++ R
Sbjct: 282 KGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKA---RQ 338
Query: 279 WRRLKKKL 286
R+K+ +
Sbjct: 339 EGRIKEAI 346
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 123/262 (46%), Gaps = 15/262 (5%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M + G PN +TYN LL+G+C + +A+ +++ M G PDV +++
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMS----------DAQALYERMIKAGYSPDVVTYNT 50
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+LH + + + +L + ++G P V TY +++ C ++++A+ +L MV
Sbjct: 51 LLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSEN 110
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDM 208
+ P TYN NG + R + D PN+ TY+ LI G+ L +
Sbjct: 111 LVPDVVTYNSLVNGLC----KNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSE 166
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+++ V ++ +Y +LI GL ++ + EA + F +++ GL P +T+
Sbjct: 167 ALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 226
Query: 269 GLIQSDMLRTWRRLKKKLDEES 290
GL ++ + + K +DE+
Sbjct: 227 GLCKAGRVEDALLMLKDMDEKG 248
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 42/160 (26%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + +LI G C+ + A EM++RGV+P VVTYN+L++G+C+ R
Sbjct: 286 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCK-------ARQ 338
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK-----------------PQL-- 102
E I+ A +FD M +G PDV ++S ++ +A K P +
Sbjct: 339 EGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYT 398
Query: 103 ----------------SLDKLNFMKEKGICPTVATYTSVV 126
+L+ M EKG P TY +++
Sbjct: 399 YNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%)
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
PN TYN L+ RM + ++ + + D+ +Y L+HG C+ + EA +
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
F +++G +P VT+ L G ++D L +R+ +++ E++
Sbjct: 68 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLV 112
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y++LI G K ++D A R LG M +G PNV TYN L++G+C
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLC---------G 408
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
EK + A ++F M +G PD ++ ++
Sbjct: 409 LEK-VDEALELFVAMVEKGCVPDTITYGTIISA 440
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 141/263 (53%), Gaps = 12/263 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ YT+L+ WC + A R EM+E+G++P+VV +N ++ G+ R +R
Sbjct: 329 PDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLR------GQRR 382
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + K+F+ M+ +G P+V ++++++ + + K ++++ M+E P VAT
Sbjct: 383 PEAV----KMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVAT 438
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + +++ +L EM + G P A TYN K R + A ++Y++M
Sbjct: 439 YTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMI 498
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L P IHTYN+++ F+ + M +W + + D++SYT+ I+G +
Sbjct: 499 KKGL-EPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINGHIRHGR 557
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
+EA +Y EMI KG+ ++ +
Sbjct: 558 PEEAYKYIEEMINKGMKAPQIDY 580
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 10/245 (4%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR---AHKPQLSLDKLNFMKEKGICPTVAT 121
I+NA VF+ MR G + V SF+ +L ++ + + DK++ P + +
Sbjct: 278 IKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQ----YSPDLRS 333
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQM 180
YT+++ C+ + +A + EM+ G+ P +N + RG++ A+K++ M
Sbjct: 334 YTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPE-AVKMFELM 392
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K PN+ TY +LI +MDM E + ++ ++ D+ +YT L+ G ++
Sbjct: 393 KAKGP-PPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQ 451
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
EM +KG P T+ L + L +M R+ KK+ ++ + N
Sbjct: 452 MDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNM 511
Query: 301 HFKPY 305
K Y
Sbjct: 512 MMKSY 516
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 110/245 (44%), Gaps = 12/245 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M + G + V ++N LL + + E R A +VFD+M + PD+ S++
Sbjct: 288 MRKNGFDDGVESFNCLLVALAK----------EGLGREARQVFDKMHGQ-YSPDLRSYTA 336
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ + A + N M EKG+ P V + ++++ L R +A ++ M G
Sbjct: 337 LMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKG 396
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P+ TY +++ + + AM+ + +M+E C P++ TY L+ + +MD V
Sbjct: 397 PPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAK-CQPDVATYTCLLVGYGNAKQMDRV 455
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + D +Y LI L + +A + + +MI+KGL P T+ + +
Sbjct: 456 TAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKS 515
Query: 270 LIQSD 274
D
Sbjct: 516 YFVGD 520
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT L+ G+ ++D L EM ++G P+ TYN L+ + R
Sbjct: 434 PDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNR--------- 484
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP-QLSLDKLNFMKEKGICPTVA 120
+A +++ +M +G+EP + ++++++ Y + M ++GICP V
Sbjct: 485 -NMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVN 543
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR--GRKD 169
+YT + GR E+A + + EM+ G+ YN F ++ G+ D
Sbjct: 544 SYTVFINGHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSKAGKPD 594
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 104/255 (40%), Gaps = 13/255 (5%)
Query: 20 IDMAERFLGEMIERGVEPNV-VTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
+D + +++ G + N+ + L +C L RF+ R + + F V
Sbjct: 162 VDRVCAAIADVVASGADANLEAALSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATVS 221
Query: 79 GIEPDVT-SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
G T ++ +LH+ + + + + + M + G ++ + +K + G I++
Sbjct: 222 GGFTHTTITYCKMLHILGKTRQFESMVAMIQEMGKAGAL-SMDAFKVAIKSFAAAGEIKN 280
Query: 138 AEELLGEMVRNGVSPSAETYNCFF----KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
A + M +NG E++NC KE GR+ K++ Q P++ +Y
Sbjct: 281 AVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYS------PDLRSY 334
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
L+ + + +WN + + D+ + +I GL Q+ EA + F M
Sbjct: 335 TALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKA 394
Query: 254 KGLLPQKVTFETLYR 268
KG P T+ L R
Sbjct: 395 KGPPPNVWTYTMLIR 409
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 144/304 (47%), Gaps = 16/304 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P +Y +LI G+C++ + A +M R + P+ +TYN L+NG+C+
Sbjct: 367 VPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKM-------- 418
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ I AE + EM G++P V +F+ ++ Y RA + + L+ M++KGI V
Sbjct: 419 --EMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVI 476
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++ SVVK C G+I +A +L +M+ V P+A+ YN Y A L +M
Sbjct: 477 SFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKM 536
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + +I TYN+L+ +++D E+ ++ L D+ SY +I C K
Sbjct: 537 KSSGVSA-SIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGD 595
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRL-KKKLDEESITFGS 295
A + EM + + P T+ L L + DM ++ + K ++ S +G+
Sbjct: 596 TDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGT 655
Query: 296 EFQN 299
+N
Sbjct: 656 RCEN 659
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 139/325 (42%), Gaps = 44/325 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++I G K ++ R +M++ G +PNVVTYNVLL+G+CR R
Sbjct: 228 PNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAG------RM 281
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++T + DEM + PD ++SI+ +R + L +KG+ T
Sbjct: 282 DET----RALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYT 337
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G++ AE++L +V G+ P+ YN Y +D GA ++ QMK
Sbjct: 338 CSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMK 397
Query: 182 E--------------------------DDLCV--------PNIHTYNILIGMFMALNRMD 207
+DL + P++ T+N LI + +++
Sbjct: 398 SRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLE 457
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ + ++ + ++ S+ ++ C+ K EA +MI K ++P + ++
Sbjct: 458 KCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSII 517
Query: 268 RGLIQSDMLRTWRRLKKKLDEESIT 292
I+S L +K+ ++
Sbjct: 518 DAYIESGGTEQAFLLVEKMKSSGVS 542
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 131/325 (40%), Gaps = 61/325 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PNV Y L+ G C+ R+D + EM + P+ TY++L +G+ R
Sbjct: 263 PNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSL 322
Query: 58 -NERFEK--------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E +K + AE+V + + G+ P ++ +++ Y +
Sbjct: 323 FGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQ 382
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
Q + MK + I P TY +++ LC I +AE+L+ EM ++GV PS ET
Sbjct: 383 VRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVET 442
Query: 157 YNCFFKEY------------------RGRKD-------------ANG----AMKLYRQMK 181
+N Y +G K NG A+ + M
Sbjct: 443 FNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMI 502
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D+ VPN YN +I ++ + + +K S + + +Y +L+ GLC+ +
Sbjct: 503 HKDV-VPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQI 561
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
EA + + +GL P V++ T+
Sbjct: 562 DEAEELIYNLTNQGLRPDVVSYNTI 586
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 118/276 (42%), Gaps = 11/276 (3%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
E P+ +YNV++ G+ R +A KVFDEM RG+ P+ +++ ++
Sbjct: 188 EGAPPPDAFSYNVVIAGLWRSGK----------GSDALKVFDEMVDRGVAPNQITYNTMI 237
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ + + + M + G P V TY ++ LC GR+++ L+ EM +
Sbjct: 238 DGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSML 297
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P TY+ F D+ + L+ + + + + +T +IL+ ++ +
Sbjct: 298 PDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVII-GAYTCSILLNGLCKDGKVAKAEQ 356
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ + + L Y LI+G C+ + + A F +M + + P +T+ L GL
Sbjct: 357 VLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLC 416
Query: 272 QSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPYRR 307
+ +M+ L ++++ + E N Y R
Sbjct: 417 KMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGR 452
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 135/268 (50%), Gaps = 11/268 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +L+ G CKI A + L + +R P+VV Y+ +++G+C+ +K +
Sbjct: 173 YGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCK----------DKIVN 222
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A F EM RGI P+V ++S ++ + A + + LN M K I P V TY ++
Sbjct: 223 QAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILI 282
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G++++A++LL EM G TYN ++ + A L+ +MK+ +
Sbjct: 283 DALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGI- 341
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN +TY LI R+ ++++ H+ +D+ +Y ++I GLC++ + +A
Sbjct: 342 QPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALA 401
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+M + G +P VTF+ + R L + D
Sbjct: 402 MKSKMEDNGCIPNAVTFDIIIRSLFEKD 429
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 19/200 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y++LI+G+C ++ A L EMI + + PNV TYN+L++ +C+
Sbjct: 238 PNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCK---------- 287
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN--FMKEK--GICP 117
E ++ A+K+ EM +G DV +++ VL ++ +LDK FMK K GI P
Sbjct: 288 EGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQ----NLDKATALFMKMKKWGIQP 343
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
TYT+++ LC GR+++A++L ++ G TYN + A+ +
Sbjct: 344 NKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMK 403
Query: 178 RQMKEDDLCVPNIHTYNILI 197
+M ED+ C+PN T++I+I
Sbjct: 404 SKM-EDNGCIPNAVTFDIII 422
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 135/285 (47%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ LI +C + ++ + LG++++ G +P+ +T N L+ G+C + + + F
Sbjct: 98 PNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHF 157
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
D++ +G + + S+ +L+ + + + ++ L ++++ P V
Sbjct: 158 H----------DKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVM 207
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ LC + A + EM G+ P+ TY+ + GA L +M
Sbjct: 208 YSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMI 267
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ PN++TYNILI ++ +++ + D+ +Y ++ GLC+ Q
Sbjct: 268 LKNI-NPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNL 326
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A F++M + G+ P K T+ L GL + L+ ++L + L
Sbjct: 327 DKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHL 371
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y LI CK ++ A++ L EM +G +VVTYN +L+G+C+ +L
Sbjct: 273 PNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLD----- 327
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F +M+ GI+P+ +++ ++ + + + + + KG C V T
Sbjct: 328 -----KATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRT 382
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ LC G + A + +M NG P+A T++ + + + + A KL M
Sbjct: 383 YNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGM 441
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 34/252 (13%)
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
+M V+GIEP++ + +I+++ + + S L + + G P T +++K LC G
Sbjct: 90 QMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKG 149
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE----------- 182
++ + ++V G + +Y + A+KL R +++
Sbjct: 150 EVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYS 209
Query: 183 ---DDLC--------------------VPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
D LC PN+ TY+ LI F ++ + N +
Sbjct: 210 TIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILK 269
Query: 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 279
+ ++ +Y +LI LC++ K KEA + EM KG VT+ ++ GL +S L
Sbjct: 270 NINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKA 329
Query: 280 RRLKKKLDEESI 291
L K+ + I
Sbjct: 330 TALFMKMKKWGI 341
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 138/306 (45%), Gaps = 26/306 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+ Y +I CK ++ A + +MIE G P+VVTYN +++G+C+
Sbjct: 78 PSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLL 137
Query: 52 -----RASLHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R PN R TI A +VF EM R I PD S+ I++ ++
Sbjct: 138 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAK 197
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A K + M + GI P+ TY V+ +C +++A EL M G PS T
Sbjct: 198 AGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFT 257
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N + R + A +L ++M DD VP++ TY+ LI ++ R+D R + +
Sbjct: 258 FNILIDAHCKRGKMDEAFRLLKRMT-DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + + LIHGLC+ + KEA + M+ G P VT+ TL G ++
Sbjct: 317 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 376
Query: 277 RTWRRL 282
R L
Sbjct: 377 ERAREL 382
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 23/280 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y++LI G C I R+D A L +M++R +P VVT N L++G+C+
Sbjct: 287 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR------ 340
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I+ A +V D M G PDV +++ ++H + RA + + + + L+ M +G+ P V
Sbjct: 341 ----IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 396
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT++V LC R+ +A + +M +G +P+ TY + +G +KL+ +M
Sbjct: 397 TYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM 456
Query: 181 KEDDLCV---PNIHTYNILIGMFMALNR----MDMVREIWNHVKGSELGLDLDSYTMLIH 233
+C P+ Y L R ++++RE ++ G ++ Y +
Sbjct: 457 ----VCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV--YRFAVD 510
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
GL + K + A + +M+ G LP +L GL +S
Sbjct: 511 GLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKS 550
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 12/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI G K +++ A +++ GV P+ V Y L++G+C
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLC----------M 57
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A ++F +M RG P ++++++ + + + D + M E G P V T
Sbjct: 58 ANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 117
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V+ LC GR+E+A L EM R G +P+ ++N + + A +++ +M+
Sbjct: 118 YNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D+ P+ +Y ILI +++ +++ + S + +Y ++IHG+C
Sbjct: 178 ARDI-PPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTL 236
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRTWRRLKKKLDEESI 291
EA + F M KG P + TF L + M +R LK+ D+ +
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV 287
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 1/218 (0%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
M R + PD S+ I++ ++A K + D + G+ P+ YTS++ LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+DA EL +M R G PS TYN R A L ++M ED VP++ TYN
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGH-VPDVVTYN 119
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
++ R++ ++N ++ + S+ +I GLC++ K +ACQ F EM +
Sbjct: 120 TVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAR 179
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ P ++ L GL ++ L +L +++ + IT
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGIT 217
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 136/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y L++G CK + A + EM RG EPNV+TY +L+NG+C+ L
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLL------ 441
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V EM RG+ + ++ ++ R K ++L+ L+ M KG P + T
Sbjct: 442 ----EEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFT 497
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC RI++A L M+ +G + TYN R A+ L M
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C + TYN LI F + ++ E++ + LG D S ++I+GLC+ K
Sbjct: 558 FRG-CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKV 616
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A ++ + I +G +P VT+ ++ GL + ++ L +L E +
Sbjct: 617 DNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGV 666
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 145/295 (49%), Gaps = 27/295 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---- 56
MP+V+ + +I+G CK+N+I A + + M+ RG P+ +TY LL+G+CR L+
Sbjct: 285 MPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARK 344
Query: 57 -------PNERFEKTIRN----------AEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAH 98
PN T+ N A+ +E + G +PD+ +++I++H +
Sbjct: 345 ILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEG 404
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
+ D +N M +G P V TY +V LC G +E+A +L EM G++ ++ YN
Sbjct: 405 SLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYN 464
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
C ++ + A+ L +M C P++ TYN LI ++R+D +++++
Sbjct: 465 CLICALCRKEKVHVALNLLSEMCTKG-CKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLL 523
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ +Y LIH L + +++A +M+ +G K+T Y GLI++
Sbjct: 524 DGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKIT----YNGLIKA 574
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 16/283 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +Y +LI+ + N++ A + L EM G P+V T+N +++G+C+ +H
Sbjct: 250 VPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIH---- 305
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A K+ D M +RG PD ++ +LH R K L++ + K CP A
Sbjct: 306 ------DATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGK----LNEARKILIKIPCPNNA 355
Query: 121 TYTSVVKCLCSCGRIEDAEELLGE-MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+++ G++++A+ L E M+ G P TYN + A L +
Sbjct: 356 ILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 415
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M C PN+ TY IL+ ++ + + + L ++ Y LI LC K+
Sbjct: 416 MSRRG-CEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKE 474
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
K A EM KG P T+ +L GL + D + RL
Sbjct: 475 KVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRL 517
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
P++ Y SLIYG CK++RID A R M+ G N VTYN L++ + RR +
Sbjct: 493 PDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTL 552
Query: 58 -NERFEK-----------------TIRNAEK---VFDEMRVRGIEPDVTSFSIVLHVYSR 96
N+ + + N EK ++++M + G+ D S +I+++ +
Sbjct: 553 VNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + + L +G P + TY SV+ LC GRI++A L + GV P A T
Sbjct: 613 VGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFT 672
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
YN F N A + + E+ VP+ T+N+L+
Sbjct: 673 YNTFISWQCKEGMVNDACLFFYRGIENGF-VPSNLTWNVLV 712
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 8/214 (3%)
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
EP S+ +VL + + PQ++ + M KG+ PTV T+ V+K LC ++ A
Sbjct: 180 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACS 239
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
LL +M ++G P++ Y + + A+KL +M C+P++ T+N +I
Sbjct: 240 LLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMG-CMPDVQTFNDVIHGL 298
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+N++ ++ + + D +Y L+HGLC K EA + +++ P
Sbjct: 299 CKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNN 354
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
TL G + S L+ + L+E I FG
Sbjct: 355 AILNTLINGYVMSGQLKEAQSF---LNETMINFG 385
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 122/300 (40%), Gaps = 18/300 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P K Y ++ N +A +M+ +GV P V T+ +++ +C NE
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMF-----NE-- 233
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A + +M G P+ + ++H S+ ++ +L L M G P V T
Sbjct: 234 ---VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQT 290
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ V+ LC +I DA +L+ M+ G P TY N A K+ ++
Sbjct: 291 FNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP 350
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQ 239
PN N LI ++ ++ + N G D+ +Y +L+HGLC++
Sbjct: 351 -----CPNNAILNTLINGYVMSGQLKEAQSFLNETM-INFGFQPDIFTYNILMHGLCKEG 404
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
A EM +G P +T+ L GL ++ +L + ++ +T S N
Sbjct: 405 SLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYN 464
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/175 (18%), Positives = 77/175 (44%)
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
+KG C T Y + L + G+ + ++LL +M G+ + K Y
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPG 164
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A++L M+ LC P +Y++++ + + N + ++ + + + ++ ++
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIV 224
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ LC + AC +M + G +P + ++TL L Q + + +L +++
Sbjct: 225 MKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM 279
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA 53
+P++ Y S++ G CK+ RI A + GV P+ TYN ++ C+
Sbjct: 632 VPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEG 684
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 137/277 (49%), Gaps = 11/277 (3%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
CK + A + L EM ++G P++VTYNV++NG+C+ E + +A +
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ----------EGRVDDAIEFLKN 52
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
+ G EP+ S++IVL A + + + + + M +KG P V T+ ++ LC G
Sbjct: 53 LPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGL 112
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+E A E+L ++ + G +P++ +YN + +K + AM M C P+I +YN
Sbjct: 113 VEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG-CYPDIVSYN 171
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
L+ +D+ E+ + +K L SY +I GL + K KEA + EM+ K
Sbjct: 172 TLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 231
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
GL P +T+ T+ GL + D + R K+ + I
Sbjct: 232 GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 268
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 137/285 (48%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ G C R + AE +GEM ++G PNVVT+N+L++ +CR+ + P
Sbjct: 60 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEP---- 115
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +V +++ G P+ S++ +LH + + K ++ L+ M +G P + +
Sbjct: 116 ------ALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 169
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G ++ A ELL ++ G +P +YN A++L +M
Sbjct: 170 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 229
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I TY+ + +R++ + V+ + + Y +I GLC++++
Sbjct: 230 SKGL-QPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 288
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A F MI G +P + T+ L GL +++ R L +L
Sbjct: 289 HSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 333
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 131/271 (48%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++ G C+ R+D A FL + G EPN V+YN++L G+C ER+
Sbjct: 25 PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTA------ERW 78
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +AE++ EM +G P+V +F++++ R + +L+ L + + G P +
Sbjct: 79 E----DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 134
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C +++ A L MV G P +YN + + A++L Q+K
Sbjct: 135 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 194
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C P + +YN +I + E+ N + L D+ +Y+ + GLC + +
Sbjct: 195 -DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 253
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++A + F ++ + G+ P V + + GL +
Sbjct: 254 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 284
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 147/311 (47%), Gaps = 36/311 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------- 54
PNV +T+L+ G C+ R+ A L M+E G++PN +TY +++G+C+
Sbjct: 79 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 138
Query: 55 ---------LHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ P+ I +A+ +F EM+ +GI PD+ ++S +++ +
Sbjct: 139 LRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFC 198
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ K + L M + I P V T++ ++ L G + A++LL EM+ +GV P+
Sbjct: 199 SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVV 258
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV----------PNIHTYNILIGMFMALNR 205
T N A+++++ M++ + + P++ TYNILI + +
Sbjct: 259 TCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGK 318
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
E++ + + D +Y+ +I+GLC++ + EA Q F M K P VTF T
Sbjct: 319 FLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNT 378
Query: 266 LYRGLIQSDML 276
L G ++ M+
Sbjct: 379 LITGYCKAGMV 389
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 133/280 (47%), Gaps = 22/280 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +Y+++I G K R A+ EM ++G+ P++VTY+ ++NG C
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKW------ 203
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+++ EM VR I PDV +FS +++ + + D L M G+CP V T
Sbjct: 204 ----SEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVT 259
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVR-----------NGVSPSAETYNCFFKEYRGRKDA 170
+++ LC G+++DA E+ M + NGV P +TYN
Sbjct: 260 CNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKF 319
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
A +LY +M + VP+ TY+ +I +R+D ++++ + ++ ++
Sbjct: 320 LEAEELYEEMPHRGI-VPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNT 378
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
LI G C+ + + F EM +G++ +T+ TL RG
Sbjct: 379 LITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGF 418
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 36/235 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+V ++ LI K ++ A+ L EMI GV PNVVT N LL+G+C L
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEM 279
Query: 56 --------------HPNERFEKTIRN----------------AEKVFDEMRVRGIEPDVT 85
H E ++ AE++++EM RGI PD
Sbjct: 280 FKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTV 339
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
++S +++ + + + + M K P + T+ +++ C G ++D EL EM
Sbjct: 340 TYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEM 399
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
R G+ +A TY + +R + NG++ ++++M + I N+L G++
Sbjct: 400 GRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLW 454
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 115/249 (46%), Gaps = 14/249 (5%)
Query: 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
++ ++N+L+ C + L A F ++ G P + +F+ +LH
Sbjct: 14 DIYSFNILIKCFCSCSKL----------PFALSTFGKLTKLGFHPTLVTFNTLLHGLCVE 63
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ +LD + M + P V T+T+++ LC GR+ +A LL MV +G+ P+ TY
Sbjct: 64 DRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITY 119
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
D A+ L R+M+E P++ Y+ +I R + ++ ++
Sbjct: 120 GTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQ 179
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+ D+ +Y+ +I+G C KW EA + EM+ + + P VTF L L++ L
Sbjct: 180 DKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLN 239
Query: 278 TWRRLKKKL 286
+ + L +++
Sbjct: 240 SAQDLLQEM 248
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 131/289 (45%), Gaps = 20/289 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++ + LI +C +++ A G++ + G P +VT+N LL+G+C E
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLC----------VE 63
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A +F +M +P+V +F+ +++ R + ++ L+ M E G+ P TY
Sbjct: 64 DRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITY 119
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVR-NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++V +C G A LL +M + + P Y+ A L+ +M+
Sbjct: 120 GTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQ 179
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TY+ +I F + + + + + ++ D+ +++ LI+ L ++
Sbjct: 180 DKGI-FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDL 238
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKKL 286
A EMI G+ P VT TL GL S D L ++ ++K +
Sbjct: 239 NSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSM 287
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ Y LI G + AE EM RG+ P+ VTY+ ++NG+C+++ L
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLD----- 355
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++FD M + P++ +F+ ++ Y +A L+ M +GI T
Sbjct: 356 -----EATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ G I + ++ EM+ +GV P T +++ A+ + +++
Sbjct: 411 YITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+S+I G CK +R+D A + M + PN+VT+N L+ G C+
Sbjct: 335 VPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAG------- 387
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + ++F EM RGI + ++ ++ + + SLD M G+ P
Sbjct: 388 ---MVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTI 444
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEM 145
T +++ L S ++ A +L E+
Sbjct: 445 TIRNMLTGLWSKEELKRALAMLEEL 469
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 50/186 (26%)
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ ++ ++KC CSC ++ A G++ + G P+ T+N + A+ L+
Sbjct: 15 IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
QM C PN+ T+ T L++GLC +
Sbjct: 75 QM-----CKPNVVTF-----------------------------------TTLMNGLCRE 94
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
+ EA M+E GL P ++T+ T+ G+ + + L +K++E S
Sbjct: 95 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELS-------- 146
Query: 299 NYHFKP 304
H KP
Sbjct: 147 --HIKP 150
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 141/278 (50%), Gaps = 25/278 (8%)
Query: 3 NVKMYTSLIYGWCK-INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
N K + ++ GWC I +ER EM +RG+ +VV+Y +++ + SL+
Sbjct: 195 NTKSFNIVLNGWCNLIGSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLY----- 249
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+++ +M+ GIEPD ++ V+H ++ + + + M+EKG+ P + T
Sbjct: 250 -----RVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVT 304
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++K LC ++E+A+ +M++ +SP+ TY+ F + R ++ ++ R+M
Sbjct: 305 YNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFLRILRTGEEVFALLEKMRKMG 364
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P TY +LI F +++ V ++W+ + + + D SY +LIHGL +
Sbjct: 365 ----CQPINDTYIMLIRKFCRWRQLENVFKLWDEMSENGISPDRSSYIVLIHGLFLNGEL 420
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 279
A +Y+ EM EK LLP+ +ML+TW
Sbjct: 421 DAAHKYYTEMKEKQLLPEPKI----------DEMLQTW 448
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 13/184 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K+Y ++I+ K ++ A + M E+GV PN+VTYN L+ +CR
Sbjct: 265 PDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCR---------- 314
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A+ FD+M R I P + ++ L + + L+K M++ G P T
Sbjct: 315 ARKVEEAKGAFDDMLKRCISPTIRTYHAFLRILRTGEEVFALLEK---MRKMGCQPINDT 371
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C ++E+ +L EM NG+SP +Y + + A K Y +MK
Sbjct: 372 YIMLIRKFCRWRQLENVFKLWDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYYTEMK 431
Query: 182 EDDL 185
E L
Sbjct: 432 EKQL 435
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 46/332 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT LI G+C+ + A +M+E+G +VV YN +LNG+C++
Sbjct: 357 VPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKK-------- 408
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K + +A +FDEM RG+ PD +F+ ++H + + +L M +K I P +
Sbjct: 409 --KLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIV 466
Query: 121 TYTSVVKCLCSCGRIEDAEEL-------------------------LG----------EM 145
TY ++ C +E A EL LG EM
Sbjct: 467 TYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEM 526
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+R G+ P+ T N K Y D + A + +M + + P+ TYN LI F+
Sbjct: 527 IRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVG-PDSITYNTLINGFVKGEY 585
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
MD + N ++ L D+ +Y ++++G C + + +EA +MIE+G+ P + T+ T
Sbjct: 586 MDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTT 645
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
L G + D L+ R ++ + +F
Sbjct: 646 LINGYVSQDNLKEAFRFHDEMLQRGFVPDDDF 677
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 146/339 (43%), Gaps = 51/339 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y ++I G CK R A+ EM+ G+ P+ TYN LL CR N F
Sbjct: 253 PTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCR------NNNF 306
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT--- 118
+ A+ +F +M RG+ PD+ SFS ++ V SR +L MK G+ P
Sbjct: 307 LE----AKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVI 362
Query: 119 --------------------------------VATYTSVVKCLCSCGRIEDAEELLGEMV 146
V Y +++ LC + DA L EMV
Sbjct: 363 YTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMV 422
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
GV P T+ + + A+ L+ M + ++ P+I TYNILI F M
Sbjct: 423 ERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNI-KPDIVTYNILIDGFCKTTEM 481
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ E+WN + ++ + SY +L++G C EA + + EMI KG+ P VT T+
Sbjct: 482 EKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTV 541
Query: 267 YRGLIQS-DMLRTWRRLKKKLDE----ESITFGSEFQNY 300
+G +S D+ + L K + E +SIT+ + +
Sbjct: 542 IKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGF 580
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 133/296 (44%), Gaps = 46/296 (15%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
SL+ G K+ +D+A E+ G+E NV T N+++N +C+ + I +
Sbjct: 155 SLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCK----------DHKIDDV 204
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
+ +M +GI D+ +++ +++ Y R + + +N M KG+ PT+ TY +V+
Sbjct: 205 KPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVING 264
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCF---------------------------- 160
LC GR A+ + EM+ G+SP TYN
Sbjct: 265 LCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPD 324
Query: 161 ---FKEYRGRKDANG----AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
F G NG A+ +R MK L VP+ Y ILI + M EI
Sbjct: 325 LISFSSLIGVSSRNGHLDQALMYFRDMKTSGL-VPDNVIYTILINGYCRNGMMSEALEIR 383
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + LD+ +Y +++GLC+K+ +A F EM+E+G++P TF TL G
Sbjct: 384 DKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHG 439
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 1/184 (0%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
D F +++ Y +A K D ++ KG ++ S++ L G ++ A E+
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
E+ R+G+ + T N + M++ + +I TYN LI +
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGI-FADIVTYNTLINAYCR 232
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
+ E+ N + G L L +Y +I+GLC+K ++ A F EM+ GL P T
Sbjct: 233 EGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTT 292
Query: 263 FETL 266
+ TL
Sbjct: 293 YNTL 296
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 82/204 (40%), Gaps = 1/204 (0%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ + F +R +G + + + +L + L+ + N + GI V T
Sbjct: 129 RKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTL 188
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+V LC +I+D + L +M + G+ TYN Y A ++ M
Sbjct: 189 NIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSG 248
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L P + TYN +I R + ++N + L D +Y L+ C +
Sbjct: 249 KGL-KPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFL 307
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
EA F +M+ +G+ P ++F +L
Sbjct: 308 EAKDIFSDMLHRGVSPDLISFSSL 331
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 146/285 (51%), Gaps = 12/285 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN ++Y LI C ++++ A RF EMI+ G++ +VTYN L+NG+ R
Sbjct: 498 PNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGR------- 550
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ AE +F +M +G PDV +++ ++ Y+++ Q L+ + MK GI PTV T
Sbjct: 551 ---VKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGT 607
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C + +++ EM++ + P YN Y + AM L++QM
Sbjct: 608 FHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMV 666
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + TYN LI ++ R+ ++ + + +K L +D+Y +LI GLC+ + +
Sbjct: 667 DQGVDCDKV-TYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDF 725
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A ++ EM+E+GLL L GL + MLR + + +L
Sbjct: 726 NGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSEL 770
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 150/358 (41%), Gaps = 59/358 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+PN Y +LI G+CK+ I+ A F M E+ VE N+VTYN LLNG+C +
Sbjct: 224 VPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDARE 283
Query: 56 ----------------------HPNERFE------KTIRNAEK----------------- 70
H N + K IR E+
Sbjct: 284 VLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEK 343
Query: 71 ---VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
V ++ G+ P S++I+++ Y + + ++ M+E+G+ P T+ +V+
Sbjct: 344 AEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVIS 403
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
C G ++ AE + MV GVSP+ ETYN Y + + +M + +
Sbjct: 404 KFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGI-K 462
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
PN+ +Y LI ++ + + G + + + Y MLI C K K+A ++
Sbjct: 463 PNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRF 522
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNY 300
F EMI+ G+ VT+ TL GL ++ ++ L K + + IT+ S Y
Sbjct: 523 FDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGY 580
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 143/309 (46%), Gaps = 23/309 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y + + +D + M++ G+ P+V YN++L G+C+
Sbjct: 155 PDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKV--------- 205
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I++A K+FDEM R + P+ +++ ++ Y + + +L MKE+ + + T
Sbjct: 206 -RRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVT 264
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR++DA E+L EM +G P F G D +G ++++
Sbjct: 265 YNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGD-DGLFD-GKEIR 322
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D+ TY IL+ + R++ E+ + + + SY +L++ C++
Sbjct: 323 IDE------RTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDV 376
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS---DMLRTW--RRLKKKLDEESITFGSE 296
K+A +M E+GL P ++TF T+ ++ D TW R ++K + T+ S
Sbjct: 377 KKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSL 436
Query: 297 FQNYHFKPY 305
Y K +
Sbjct: 437 INGYGQKGH 445
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 138/303 (45%), Gaps = 45/303 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V+ Y SLI G+ + FL EM + G++PNV++Y L+N +C+
Sbjct: 428 PTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCK---------- 477
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + +AE V +M RG+ P+ +++++ K + + + M + GI T+ T
Sbjct: 478 DRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVT 537
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ L GR++ AE+L +M G +P TYN Y + ++LY +MK
Sbjct: 538 YNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMK 597
Query: 182 EDDLCVPNIHTYNILI------------GMFMALNRMDMVRE--IWN------------- 214
+ P + T++ LI MF + +MD+V + ++N
Sbjct: 598 ILGI-KPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVM 656
Query: 215 -----HVKGSELGLDLD--SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
H + + G+D D +Y LI ++ E +M KGL+P+ T+ L
Sbjct: 657 KAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILI 716
Query: 268 RGL 270
+GL
Sbjct: 717 KGL 719
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 138/321 (42%), Gaps = 47/321 (14%)
Query: 15 CKINR-IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFD 73
C +++ +D A M + G P+ + N LL +L + FEKT+ VF
Sbjct: 97 CSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLR------TLVDSRHFEKTL----AVFA 146
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
++ G PD ++ + + + M + G+ P+V Y V+ LC
Sbjct: 147 DVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVR 206
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL-CVPNIHT 192
RI+DA +L EM++ + P+ TYN Y A+ +MKE ++ C N+ T
Sbjct: 207 RIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVEC--NLVT 264
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGS----------------------------ELGLD 224
YN L+ R+D RE+ ++GS E+ +D
Sbjct: 265 YNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRID 324
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY-----RGLIQSDMLRTW 279
+Y +L++GLC + ++A + +++E G+ P K+++ L G ++ +L T
Sbjct: 325 ERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTE 384
Query: 280 RRLKKKLDEESITFGSEFQNY 300
+ ++ L+ ITF + +
Sbjct: 385 QMEERGLEPNRITFNTVISKF 405
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +Y +IY + + + A +M+++GV+ + VTYN L+ R
Sbjct: 636 VPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLR--------- 686
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
++ + + + D+M+ +G+ P V +++I++
Sbjct: 687 -DRRVSEIKHLVDDMKAKGLVPKVDTYNILI 716
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 150/304 (49%), Gaps = 17/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V ++T+LI G+ K R+D A L EM ++ ++V YNV ++ +
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK------- 253
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K F E+ G++PD +++ ++ V +A++ +++ +++ P
Sbjct: 254 ---VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ S G+ ++A LL G PS YNC R + A+K++ +MK
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+D PN+ TYNILI M ++D E+ + ++ + L ++ + +++ LC+ QK
Sbjct: 371 KD--AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKKKLDEE----SITFGSE 296
EAC F EM K P ++TF +L GL + + ++ +K LD + SI + S
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 297 FQNY 300
+N+
Sbjct: 489 IKNF 492
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + Y+ LI+G K + M E+G + YN++++G C+
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK------ 602
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++ +EM+ +G EP V ++ V+ ++ + + K K I V
Sbjct: 603 ----VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y+S++ GRI++A +L E+++ G++P+ T+N ++ N A+ ++ M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
KE C PN TY ILI + + + W ++ + SYT +I GL +
Sbjct: 719 KELK-CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA F G +P + + GL
Sbjct: 778 IAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 46/306 (15%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N +YTSLI + R + + +MI + P++ N ++ C + P +
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD--CMFKAGEPEK--- 535
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+F+E++ R PD S+SI++H +A + + MKE+G Y
Sbjct: 536 -----GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
V+ C CG++ A +LL EM G P+ TY + A L+ + K
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 183 DDLCVPNIHTYNILIGMFMALNRMD----MVREI-----------WNH-----VKGSELG 222
+ + N+ Y+ LI F + R+D ++ E+ WN VK E+
Sbjct: 651 KRIEL-NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 223 LDL---------------DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
L +Y +LI+GLC+ +K+ +A ++ EM ++G+ P +++ T+
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 769
Query: 268 RGLIQS 273
GL ++
Sbjct: 770 SGLAKA 775
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 129/300 (43%), Gaps = 17/300 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y ++ K+ ++D A + EM ++ PN+ TYN+L++ +CR L
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLD---- 394
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++ D M+ G+ P+V + +I++ ++ K + M K P
Sbjct: 395 ------TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ S++ L GR++DA ++ +M+ + ++ Y K + K+Y+ M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P++ N + + R ++ +K D SY++LIHGL +
Sbjct: 509 INQN-CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
E + F M E+G + + + G + + +L K + +T+GS
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 15/282 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y SL+ + D ++ LGEM G P+V T ++ G C +A+ +R
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLG-CVKAN---------KLR 150
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
V MR P ++++ ++ +S + + L M+E G PTV +T+++
Sbjct: 151 EGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLI 210
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ GR++ A LL EM + + YN + + A K + +++ + L
Sbjct: 211 RGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL- 269
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+ TY +IG+ NR+D E++ H++ + +Y +I G K+ EA
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 247 YFVEMIEKGLLPQKVTFE---TLYRGLIQSD-MLRTWRRLKK 284
KG +P + + T R + + D L+ + +KK
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV +Y+SLI G+ K+ RID A L E++++G+ PN+ T+N LL+ + +
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK----------A 705
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ I A F M+ P+ ++ I+++ + K + M+++G+ P+ +Y
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ L G I +A L NG P + YN + A A L+ + +
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825
Query: 183 DDLCVPN 189
L + N
Sbjct: 826 RGLPIHN 832
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 76/196 (38%), Gaps = 38/196 (19%)
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET------------------- 156
CP +Y S++ + C + +++LGEM G PS T
Sbjct: 97 CPE--SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYD 154
Query: 157 ----------------YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
Y + ++ + L++QM+E P +H + LI F
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY-EPTVHLFTTLIRGF 213
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
R+D + + +K S L D+ Y + I + K A ++F E+ GL P +
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 261 VTFETLYRGLIQSDML 276
VT+ ++ L +++ L
Sbjct: 274 VTYTSMIGVLCKANRL 289
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y LI G CK+ + + A F EM ++G++P+ ++Y +++G+ + +
Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN------- 777
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
I A +FD + G PD ++ ++ S ++ ++D + +E
Sbjct: 778 ---IAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNR---AMDAFSLFEE 822
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 147/311 (47%), Gaps = 36/311 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------- 54
PNV +T+L+ G C+ R+ A L M+E G++PN +TY +++G+C+
Sbjct: 79 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 138
Query: 55 ---------LHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ P+ I +A+ +F EM+ +GI PD+ ++S +++ +
Sbjct: 139 LRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFC 198
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ K + L M + I P V T++ ++ L G + A++LL EM+ +GV P+
Sbjct: 199 SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVV 258
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV----------PNIHTYNILIGMFMALNR 205
T N A+++++ M++ + + P++ TYNILI + +
Sbjct: 259 TCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGK 318
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
E++ + + D +Y+ +I+GLC++ + EA Q F M K P VTF T
Sbjct: 319 FLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNT 378
Query: 266 LYRGLIQSDML 276
L G ++ M+
Sbjct: 379 LITGYCKAGMV 389
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 133/280 (47%), Gaps = 22/280 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +Y+++I G K R A+ EM ++G+ P++VTY+ ++NG C
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKW------ 203
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+++ EM VR I PDV +FS +++ + + D L M G+CP V T
Sbjct: 204 ----SEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVT 259
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVR-----------NGVSPSAETYNCFFKEYRGRKDA 170
+++ LC G+++DA E+ M + NGV P +TYN
Sbjct: 260 CNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKF 319
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
A +LY +M + VP+ TY+ +I +R+D ++++ + ++ ++
Sbjct: 320 LEAEELYEEMPHRGI-VPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNT 378
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
LI G C+ + + F EM +G++ +T+ TL RG
Sbjct: 379 LITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGF 418
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 36/235 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+V ++ LI K ++ A+ L EMI GV PNVVT N LL+G+C L
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEM 279
Query: 56 --------------HPNERFEKTIRN----------------AEKVFDEMRVRGIEPDVT 85
H E ++ AE++++EM RGI PD
Sbjct: 280 FKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTV 339
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
++S +++ + + + + M K P + T+ +++ C G ++D EL EM
Sbjct: 340 TYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEM 399
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
R G+ +A TY + +R + NG++ ++++M + I N+L G++
Sbjct: 400 GRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLW 454
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 115/249 (46%), Gaps = 14/249 (5%)
Query: 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
++ ++N+L+ C + L A F ++ G P + +F+ +LH
Sbjct: 14 DIYSFNILIKCFCSCSKL----------PFALSTFGKLTKLGFHPTLVTFNTLLHGLCVE 63
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ +LD + M + P V T+T+++ LC GR+ +A LL MV +G+ P+ TY
Sbjct: 64 DRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITY 119
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
D A+ L R+M+E P++ Y+ +I R + ++ ++
Sbjct: 120 GTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQ 179
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+ D+ +Y+ +I+G C KW EA + EM+ + + P VTF L L++ L
Sbjct: 180 DKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLN 239
Query: 278 TWRRLKKKL 286
+ + L +++
Sbjct: 240 SAQDLLQEM 248
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 131/289 (45%), Gaps = 20/289 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++ + LI +C +++ A G++ + G P +VT+N LL+G+C E
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLC----------VE 63
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A +F +M +P+V +F+ +++ R + ++ L+ M E G+ P TY
Sbjct: 64 DRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITY 119
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVR-NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++V +C G A LL +M + + P Y+ A L+ +M+
Sbjct: 120 GTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQ 179
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TY+ +I F + + + + + ++ D+ +++ LI+ L ++
Sbjct: 180 DKGI-FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDL 238
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKKL 286
A EMI G+ P VT TL GL S D L ++ ++K +
Sbjct: 239 NSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSM 287
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ Y LI G + AE EM RG+ P+ VTY+ ++NG+C+++ L
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLD----- 355
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++FD M + P++ +F+ ++ Y +A L+ M +GI T
Sbjct: 356 -----EATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ G I + ++ EM+ +GV P T +++ A+ + +++
Sbjct: 411 YITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+S+I G CK +R+D A + M + PN+VT+N L+ G C+
Sbjct: 335 VPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAG------- 387
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + ++F EM RGI + ++ ++ + + SLD M G+ P
Sbjct: 388 ---MVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTI 444
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEM 145
T +++ L S ++ A +L E+
Sbjct: 445 TIRNMLTGLWSKEELKKALAMLEEL 469
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 50/186 (26%)
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ ++ ++KC CSC ++ A G++ + G P+ T+N + A+ L+
Sbjct: 15 IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
QM C PN+ T+ T L++GLC +
Sbjct: 75 QM-----CKPNVVTF-----------------------------------TTLMNGLCRE 94
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
+ EA M+E GL P ++T+ T+ G+ + + L +K++E S
Sbjct: 95 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELS-------- 146
Query: 299 NYHFKP 304
H KP
Sbjct: 147 --HIKP 150
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 136/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y L++G CK + A + EM RG EPNV+TY +L+NG+C+ L
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLE----- 442
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V EM RG+ + ++ ++ R K ++L+ L+ M KG P + T
Sbjct: 443 -----EAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFT 497
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC RI++A L M+ +G + TYN R A+ L M
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C + TYN LI F + ++ E++ + LG D S ++I+GLC+ K
Sbjct: 558 FRG-CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKV 616
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A ++ + I +G +P VT+ ++ GL + ++ L +L E +
Sbjct: 617 DNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGV 666
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 145/295 (49%), Gaps = 27/295 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---- 56
MP+V+ + +I+G CK+N+I A + + M+ RG P+ +TY LL+G+CR L+
Sbjct: 285 MPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARK 344
Query: 57 -------PNERFEKTIRN----------AEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAH 98
PN T+ N A+ +E + G +PD+ +++I++H +
Sbjct: 345 ILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEG 404
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
+ D +N M +G P V TY +V LC G +E+A +L EM G++ ++ YN
Sbjct: 405 SLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYN 464
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
C ++ + A+ L +M C P++ TYN LI ++R+D +++++
Sbjct: 465 CLICALCRKEKVHVALNLLSEMCTKG-CKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLL 523
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ +Y LIH L + +++A +M+ +G K+T Y GLI++
Sbjct: 524 DGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKIT----YNGLIKA 574
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 16/283 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +Y +LI+ + N++ A + L EM G P+V T+N +++G+C+ +H
Sbjct: 250 VPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIH---- 305
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A K+ D M +RG PD ++ +LH R K L++ + K CP A
Sbjct: 306 ------DATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGK----LNEARKILIKIPCPNNA 355
Query: 121 TYTSVVKCLCSCGRIEDAEELLGE-MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+++ G++++A+ L E M+ G P TYN + A L +
Sbjct: 356 ILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNE 415
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M C PN+ TY IL+ ++ + + + L ++ Y LI LC K+
Sbjct: 416 MSRRG-CEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKE 474
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
K A EM KG P T+ +L GL + D + RL
Sbjct: 475 KVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRL 517
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
P++ Y SLIYG CK++RID A R M+ G N VTYN L++ + RR +
Sbjct: 493 PDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTL 552
Query: 58 -NERFEK-----------------TIRNAEK---VFDEMRVRGIEPDVTSFSIVLHVYSR 96
N+ + + N EK ++++M + G+ D S +I+++ +
Sbjct: 553 VNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + + L +G P + TY SV+ LC GRI++A L + GV P A T
Sbjct: 613 VGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFT 672
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
YN F N A + + E+ VP+ T+N+L+
Sbjct: 673 YNTFISWQCKEGMVNDACSFFYRGIENGF-VPSNLTWNVLV 712
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 8/214 (3%)
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
EP S+ +VL + + PQ++ + M KG+ PTV T+ V+K LC ++ A
Sbjct: 180 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACS 239
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
LL +M ++G P++ Y + + A+KL +M C+P++ T+N +I
Sbjct: 240 LLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMG-CMPDVQTFNDVIHGL 298
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+N++ ++ + + D +Y L+HGLC K EA + +++ P
Sbjct: 299 CKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNN 354
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
TL G + S L+ + L+E I FG
Sbjct: 355 AILNTLINGYVMSGQLKEAQSF---LNETMINFG 385
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 122/300 (40%), Gaps = 18/300 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P K Y ++ N +A +M+ +GV P V T+ +++ +C NE
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMF-----NE-- 233
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A + +M G P+ + ++H S+ ++ +L L M G P V T
Sbjct: 234 ---VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQT 290
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ V+ LC +I DA +L+ M+ G P TY N A K+ ++
Sbjct: 291 FNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP 350
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQ 239
PN N LI ++ ++ + N G D+ +Y +L+HGLC++
Sbjct: 351 -----CPNNAILNTLINGYVMSGQLKEAQSFLNETM-INFGFQPDIFTYNILMHGLCKEG 404
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
A EM +G P +T+ L GL ++ +L + ++ +T S N
Sbjct: 405 SLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYN 464
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/175 (18%), Positives = 77/175 (44%)
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
+KG C T Y + L + G+ + ++LL +M G+ + K Y
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPG 164
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A++L M+ LC P +Y++++ + + N + ++ + + + ++ ++
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIV 224
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ LC + AC +M + G +P + ++TL L Q + + +L +++
Sbjct: 225 MKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM 279
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y S++ G CK+ RI A + GV P+ TYN ++ C+ ++
Sbjct: 632 VPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACS 691
Query: 61 F 61
F
Sbjct: 692 F 692
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 140/280 (50%), Gaps = 14/280 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +LI G C+ +D+A+ +MI+ G+ P+VVT+ +L+ G C+ +L
Sbjct: 379 VPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNL----- 433
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A+++FDEM RG++PD +++ + + P + MK +G P +
Sbjct: 434 -----PMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLI 488
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC G +DA EL+ +M G+ P TY + A +++ M
Sbjct: 489 TYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDM 548
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P++ TY +LI + R+D ++ ++ ++ + ++ +Y LI+GLC++
Sbjct: 549 LKKGIH-PSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENM 607
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR 280
A F EM KG+ P K T+ L ++ L+ W+
Sbjct: 608 MDVAYNLFAEMESKGVSPNKYTYTILIN---ENSNLQYWQ 644
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 126/266 (47%), Gaps = 11/266 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V Y +++Y C++ R+ A R+L M+ + P++V+YN L+ G R +
Sbjct: 309 LPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNF----- 363
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +F E+R + + P V +++ ++ R ++ + M + G+CP V
Sbjct: 364 -----AEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVV 418
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T +V+ C G + A+EL EM+ G+ P Y + + A + +M
Sbjct: 419 TFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEM 478
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + P++ TYN+LI L D E+ ++ + D +YT +IH
Sbjct: 479 KAEGFP-PDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGL 537
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
++A + F +M++KG+ P VT+ L
Sbjct: 538 LRKAEEVFSDMLKKGIHPSVVTYTVL 563
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 130/268 (48%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + + +++ CK + A L M G +PN V+YNVL+NG+ + F
Sbjct: 205 PTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKG------EF 258
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A+++ ++M + G++ +++ ++ + + + + D M +G PTV T
Sbjct: 259 DR----AKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVT 314
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GR+ DA L MV + P +YN Y + A+ L+ +++
Sbjct: 315 YNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+L VP++ TYN LI +D+ + + + + L D+ ++T+L+ G C+
Sbjct: 375 SKNL-VPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNL 433
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
A + F EM+ +GL P + + T G
Sbjct: 434 PMAKELFDEMLSRGLKPDCIAYTTRIVG 461
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 106/239 (44%), Gaps = 60/239 (25%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPN----------------------- 38
P+V +T L+ G+C++ + MA+ EM+ RG++P+
Sbjct: 415 PDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGM 474
Query: 39 ------------VVTYNVLLNGVCRRASLH-PNERFEKT--------------------- 64
++TYNVL+NG+C+ + NE +K
Sbjct: 475 KEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLI 534
Query: 65 ---IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+R AE+VF +M +GI P V ++++++H Y+ + + + M++KG+ P V T
Sbjct: 535 SGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVIT 594
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ LC ++ A L EM GVSP+ TY E + A+KLY+ M
Sbjct: 595 YNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDM 653
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 11/267 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+VK+ LI + K ++ +M+ G+ P+V N +L + ++
Sbjct: 136 SVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKS--------- 186
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ E+V+ M I P + +F+ ++ + + +++ L+ M+ G P +Y
Sbjct: 187 -MVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSY 245
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+V L G + A+EL+ +M G+ SA TYN + + ++ A L R+M
Sbjct: 246 NVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLG 305
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+P + TYN ++ L R+ R + + +L DL SY LI+G +
Sbjct: 306 RG-ALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFA 364
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRG 269
EA F E+ K L+P VT+ TL G
Sbjct: 365 EALLLFSELRSKNLVPSVVTYNTLIDG 391
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 83/162 (51%), Gaps = 10/162 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YTS+I+ + AE +M+++G+ P+VVTY VL++ R L
Sbjct: 519 VPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLD---- 574
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A+K FDEM+ +G+ P+V +++ +++ + + ++ + M+ KG+ P
Sbjct: 575 ------FAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKY 628
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
TYT ++ + +DA +L +M+ + P + T++ K
Sbjct: 629 TYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMK 670
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 1/204 (0%)
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
R E V +++ V+++ + L M G+ P V V+K L + +
Sbjct: 131 RNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNE 190
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
EE+ M++ + P+ T+N + A+++ M+ C PN +YN+L+
Sbjct: 191 VEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFG-CDPNDVSYNVLV 249
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
D +E+ + L + +Y LI G C+K+ ++EA EM+ +G L
Sbjct: 250 NGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGAL 309
Query: 258 PQKVTFETLYRGLIQSDMLRTWRR 281
P VT+ T+ L + + RR
Sbjct: 310 PTVVTYNTIMYSLCRLGRVSDARR 333
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 139/278 (50%), Gaps = 14/278 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ +TSL+YGWC+ ++ A+ L +M E G+EP++V + LL+G +
Sbjct: 237 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA----- 291
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT-VA 120
+A + ++MR RG EP+ +++++ R K ++ E+ C +
Sbjct: 292 -----DAYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIV 346
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ C G I+ +L +M + GV PS TY + ++ ++L +M
Sbjct: 347 TYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKM 406
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K+ C P++ YN++I + + +WN ++ + L D + ++I+G +
Sbjct: 407 KQIG-CHPDLLIYNVVIRLACNFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQGY 465
Query: 241 WKEACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
EAC +F EM+ +G+ PQ T ++L L++ D L
Sbjct: 466 LIEACSHFKEMVSRGIFSAPQYGTLKSLLNTLLRDDKL 503
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 14/273 (5%)
Query: 2 PNVKMYTSLIYGWCKI-NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
PN YT LI C+ R+D A R EM G E ++VTY L++G C+
Sbjct: 307 PNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG------- 359
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I V D+MR +G+ P ++ +L + + + + L+ + MK+ G P +
Sbjct: 360 ---MIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDLL 416
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y V++ C+ +++A L EM NG+SP A+ + + + A +++M
Sbjct: 417 IYNVVIRLACNFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEACSHFKEM 476
Query: 181 KEDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCE 237
+ P T L+ + ++++M +++W+ + K S L++ ++T+ IH L
Sbjct: 477 VSRGIFSAPQYGTLKSLLNTLLRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALFA 536
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
K KEAC Y ++M+E L+PQ T+ L +GL
Sbjct: 537 KGHVKEACSYCLDMMEMDLMPQPNTYVKLMKGL 569
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 139/304 (45%), Gaps = 44/304 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ +LI+G CK + + L +M+ERG+ + +TYN L++G C+
Sbjct: 498 VPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCK--------- 548
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E ++ ++ +EM +GI+PD+ +F+++LH A K + + K+ G P V
Sbjct: 549 -EGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVY 607
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ C ++E+ E LL E+V + ++ YN + Y + N A +L M
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDM 667
Query: 181 KE--------------DDLC--------------------VPNIHTYNILIGMFMALNRM 206
K LC +PN+ Y +IG + L +M
Sbjct: 668 KSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQM 727
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ V + + + + +YT++I G C+ K KEA + EM EKG+LP VT+
Sbjct: 728 NKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAF 787
Query: 267 YRGL 270
GL
Sbjct: 788 TNGL 791
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 137/290 (47%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I+G CK R+D A RF +M++ V P+++TY+V +NG+ +
Sbjct: 289 PNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLI---------KL 339
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK I A V EM G P+ ++ ++ Y + +L + M KGI P T
Sbjct: 340 EK-IDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVT 398
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
S+++ C +I AE +L EM+ G+ + +++ + A+ R+M
Sbjct: 399 LNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREML 458
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+L PN L+ + E+W + G ++ + LIHGLC+
Sbjct: 459 LRNL-RPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNM 517
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+E + +M+E+GL+ ++T+ TL G + ++ LK+++ ++ I
Sbjct: 518 QETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGI 567
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + L++G C ++ID A R E + G PNV TY V+++G C+
Sbjct: 569 PDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCK---------- 618
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ E + +E+ + +E + ++ ++ Y + + MK +G+ + AT
Sbjct: 619 ANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCAT 678
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ LC+ G ++DA+ LL EM + G+ P+ Y Y N + ++M
Sbjct: 679 YSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMS 738
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ PN TY I+I F L + ++ N + + D +Y +GLC++ K
Sbjct: 739 SHNI-HPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKV 797
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+EA + EM + ++T+ TL G Q
Sbjct: 798 EEAFKVCDEMSSGAVCLDEITYTTLIDGCHQ 828
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +Y +LI G+CK+ I A + +M+ +G+ PN VT N L+ G C+
Sbjct: 358 VPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCK--------- 408
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I AE V +EM RG+ + SFS+V++ + +L + M + + P
Sbjct: 409 -SDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDG 467
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T++V LC G+ +A EL ++ G P+ T N + +KL R M
Sbjct: 468 LLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDM 527
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E L I TYN LI ++ E+ + + D+ ++ +L+HGLC K
Sbjct: 528 LERGLVFDRI-TYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADK 586
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
EA + + E + G +P T+ + G +++ + L KKL+ S+ + S
Sbjct: 587 IDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNS 646
Query: 296 EFQNY 300
+ Y
Sbjct: 647 LIRAY 651
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 148/315 (46%), Gaps = 26/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR----ASLH- 56
PN SLI G+CK ++I AE L EMI RG+ N ++++++N +C + +LH
Sbjct: 394 PNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHF 453
Query: 57 ----------PNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN+ T+ + A +++ + +G P++ + + ++H +
Sbjct: 454 IREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCK 513
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A Q +L L M E+G+ TY +++ C G++++ EL EMV+ G+ P T
Sbjct: 514 AGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYT 573
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N + A +L+ + K++ VPN++TY ++I + N+++ + N +
Sbjct: 574 FNLLLHGLCNADKIDEASRLWHECKKNGY-VPNVYTYGVMIDGYCKANKVEEGENLLNEL 632
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+L L+ Y LI C A + +M +G+L T+ +L GL ++
Sbjct: 633 VSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLV 692
Query: 277 RTWRRLKKKLDEESI 291
+ L ++ +E +
Sbjct: 693 DDAKHLLDEMRKEGL 707
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +I G+CK N+++ E L E++ + +E N V YN L+ C +++ R
Sbjct: 603 VPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFR 662
Query: 61 FEKTIR-------------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
++ +A+ + DEMR G+ P+V ++ ++ YS
Sbjct: 663 LRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYS 722
Query: 96 RAHKPQLSLDKLNF----MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ + ++K+N M I P TYT ++ C G+ ++A +LL EM G+
Sbjct: 723 KLGQ----MNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGIL 778
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
P A TYN F A K+ +M +C+ I TY LI
Sbjct: 779 PDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEI-TYTTLI 823
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 130/295 (44%), Gaps = 50/295 (16%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
+ ++G+ P++ T LL+ + + L + + +V+D + + GI PDV FS
Sbjct: 212 LAKKGLFPSLKTCTFLLSSLVKANEL----------KKSYEVYDFICLGGIIPDVHLFST 261
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+++ + + H+ ++ + M++ G+ P V TY +++ LC GR+++A +MV+
Sbjct: 262 MINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEK 321
Query: 150 VSPSAETY----------------NCFFKE-------------------YRGRKDANGAM 174
VSPS TY NC KE Y + + A+
Sbjct: 322 VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEAL 381
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
K+ M + PN T N LI F +++ + + G L ++ S++M+I+
Sbjct: 382 KIRDDMLSKGIS-PNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINW 440
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI----QSDMLRTWRRLKKK 285
LC K ++ A + EM+ + L P TL GL Q + + W RL K
Sbjct: 441 LCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGK 495
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 5/211 (2%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A VF + +G+ P + + + +L +A++ + S + +F+ GI P V +++++
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
C R +DA L +M + GV+P+ TYN + A + +M ++ +
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVS- 323
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEKQKWKEAC 245
P++ TY++ I + L ++D + + SELG + Y LI G C+ EA
Sbjct: 324 PSLITYSVFINGLIKLEKIDEANCVLKEM--SELGFVPNEVVYNTLIDGYCKMGNISEAL 381
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ +M+ KG+ P VT +L +G +SD +
Sbjct: 382 KIRDDMLSKGISPNSVTLNSLIQGFCKSDQI 412
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT +I G+CK+ + A + L EM E+G+ P+ VTYN NG+C+
Sbjct: 744 PNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCK---------- 793
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK 106
E + A KV DEM + D +++ ++ H+P + ++
Sbjct: 794 EGKVEEAFKVCDEMSSGAVCLDEITYTTLI---DGCHQPSTATNQ 835
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 52/105 (49%)
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
P++ T L+ + N + E+++ + + D+ ++ +I+ C+ + +A
Sbjct: 219 PSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGL 278
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
F +M + G+ P VT+ + GL +S L R K+K+ +E ++
Sbjct: 279 FSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVS 323
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 142/291 (48%), Gaps = 12/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAER-FLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
PNV +TSLI G CK + A R FL + +PNV+TY +++G CR
Sbjct: 308 PNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCR--------- 358
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + AE + M+ +G+ P+ +++ ++ + +A + + D +N M +G P +
Sbjct: 359 -EDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLC 417
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V LC GR+++A ++L + +NG+ P TYN E+ +++ A+ L+ +M
Sbjct: 418 TYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKM 477
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P+IH+Y LI +F NRM + + +YT +I G C +
Sbjct: 478 LKIGI-QPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGN 536
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A ++F + + G P +T+ + GL + R L + E+ +
Sbjct: 537 LTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGL 587
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 121/266 (45%), Gaps = 46/266 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YT+LI G CK + A + M G PN+ TYN ++NG+C+R
Sbjct: 378 VPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGR------ 431
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A K+ ++ G++PD +++I++ + + + +L N M + GI P +
Sbjct: 432 ----VQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIH 487
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+YT+++ C R++++E E VR G+ P+ +TY Y + AMK + ++
Sbjct: 488 SYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRL 547
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D C P+ TY +I GLC++ K
Sbjct: 548 -SDHGCAPDSITYGAIIS-----------------------------------GLCKQSK 571
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
EA + MIEKGL+P +VT TL
Sbjct: 572 RDEARSLYDSMIEKGLVPCEVTRITL 597
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 122/270 (45%), Gaps = 10/270 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN + +I ++ ++ AE EM RGV+P+ ++Y V++ C+ +
Sbjct: 167 VPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGN------ 220
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A+K M RG D +F++++ +S +L + + G+ P +
Sbjct: 221 ----ILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLI 276
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+T +++ LC G I+ A E+L EMV G P+ T+ + A +L+ ++
Sbjct: 277 NFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKL 336
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ PN+ TY +I + ++++ + + +K L + ++YT LI G C+
Sbjct: 337 VRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGN 396
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ A M +G P T+ + GL
Sbjct: 397 FERAYDLMNLMSSEGFSPNLCTYNAIVNGL 426
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 17/223 (7%)
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
RN+EK + MR ++ +S + + +++ + M +G+ P T +
Sbjct: 129 RNSEKACEVMRC------------MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWI 176
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+K G +E AE L EM GV P + +Y Y + A K M E
Sbjct: 177 IKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGF 236
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKE 243
V N T+ ++I F + R +W + ++GL +L ++T +I GLC++ K+
Sbjct: 237 VVDNA-TFTLIISRFSG--KGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQ 293
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A + EM+ KG P T +L GL + RL KL
Sbjct: 294 AFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKL 336
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 63/343 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G CK+ A R LG M+++ +PNV YN +++ +C+
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCK---------- 213
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A +F EM +GI PD+ +++ ++H + + LN M + I P V +
Sbjct: 214 DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 273
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL----- 176
+ +VV LC G++ +A +++ +M++ GV P+ TY + + + A+K+
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333
Query: 177 ---------------------------------------YRQMKE-----DDL----CVP 188
Y M E D + C+P
Sbjct: 334 CKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMP 393
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
N+ +YN LI + + R+D ++ + EL D +Y+ LIHGLC ++ ++A F
Sbjct: 394 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 453
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM+ +P VT+ L L ++ L L K ++ ++
Sbjct: 454 HEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 496
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 145/326 (44%), Gaps = 30/326 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V + +++ CK ++ A + +MI+RGVEPNVVTY L++G C + +
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMD---- 323
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ---------------LSLD 105
A KVFD M +G P+V S++ +++ Y + + L++D
Sbjct: 324 ------EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMD 377
Query: 106 K----LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
+ + M KG P V +Y +++ C RI+ A L GEM R + P TY+
Sbjct: 378 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLI 437
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
+ A+ L+ +M +PN+ TY IL+ + + ++GS L
Sbjct: 438 HGLCHVERLQDAIALFHEMVACSQ-IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 496
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 281
D+ + I G+C + + A F + KGL P T+ + GL + +L +
Sbjct: 497 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 556
Query: 282 LKKKLDEESITFGSEFQNYHFKPYRR 307
L +++DE T N + + R
Sbjct: 557 LFREMDENGCTLNGCIYNTITRGFLR 582
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 123/268 (45%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ LI +C +NR+ A L ++++ G +P+ T+ L+ G+C
Sbjct: 94 PNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIC----------V 143
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A +FD+M G PDV ++ +++ + ++ L M +K P V
Sbjct: 144 EGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA 203
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC ++ +A L EMV G+SP TYN + L +M
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + +P++ ++N ++ ++ ++ + + + ++ +YT L+ G C +
Sbjct: 264 DSKI-MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA + F M+ KG +P +++ TL G
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLING 350
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 110/255 (43%), Gaps = 18/255 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV Y +LI G+CKI RID A GEM + + P+ VTY+ L++G+C ER
Sbjct: 392 MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV------ER 445
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ I +F EM P++ ++ I+L + ++ L ++ + P +
Sbjct: 446 LQDAI----ALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 501
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ +C G +E A +L + G+ P TY+ R + A KL+R+M
Sbjct: 502 VNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 561
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE--- 237
E+ C N YN + F+ N ++ + D + T+ + L +
Sbjct: 562 DENG-CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL 620
Query: 238 ----KQKWKEACQYF 248
KQ + C++
Sbjct: 621 DQSLKQILRNGCKWI 635
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 111/253 (43%), Gaps = 11/253 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N ID A M+ P+ V +N LL + + + T+ + D
Sbjct: 40 NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKM-------KHHSTLLSLSHQMDSF-- 90
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
GI P++ + I+++ + ++ + L + + G P AT+T++++ +C G+I +
Sbjct: 91 -GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGE 149
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A L +M+ G P TY + + A++L M + + C PN+ YN +I
Sbjct: 150 ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN-CQPNVFAYNTII 208
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
++ +++ + + D+ +Y LIH LC +WK EM++ ++
Sbjct: 209 DSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM 268
Query: 258 PQKVTFETLYRGL 270
P V+F T+ L
Sbjct: 269 PDVVSFNTVVDAL 281
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 137/270 (50%), Gaps = 13/270 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + + LI G+C+ + + A L EM +R + P+ V+Y ++NG+C
Sbjct: 113 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHC--------- 163
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A K+ ++M G++P+V +S ++ Y+ + + + L+ M G+ P +
Sbjct: 164 -KDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFC 222
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ CL G++E+A L E+ G+ P A T+ F Y A K + +M
Sbjct: 223 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 282
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L +PN Y +LI G F A N M+ + I+ H+ + D+ + + IHGL + +
Sbjct: 283 DHGL-MPNNPLYTVLINGHFKAGNLMEAL-SIFRHLHALGVLPDVQTCSAFIHGLLKNGR 340
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+EA + F E+ EKGL+P T+ +L G
Sbjct: 341 VQEALKVFSELKEKGLVPDVFTYSSLISGF 370
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 12/290 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + + I G+ K ++ A ++ EM++ G+ PN Y VL+NG + +L
Sbjct: 253 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL------ 306
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F + G+ PDV + S +H + + Q +L + +KEKG+ P V T
Sbjct: 307 ----MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 362
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ C G +E A EL EM G++P+ YN D A KL+ M
Sbjct: 363 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 422
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L P+ TY+ +I + + +++ + + Y L+HG C++
Sbjct: 423 EKGL-EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 481
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++A F EM++KG ++F TL G +S ++ +L +++ + I
Sbjct: 482 EKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 530
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 15/285 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ ++LI G+ + ID R M+ G+ N++TYNVL++G+C +F
Sbjct: 43 PDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLC---------KF 93
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + AE + M G +P+ +F +++ Y R H +L+ L+ M+++ + P+ +
Sbjct: 94 GKMEKAAE-ILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 152
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC C + A +LL +M +G+ P+ Y+ Y A +L M
Sbjct: 153 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMS 212
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I YN +I +M+ ++G L D ++ I G + K
Sbjct: 213 CSGV-APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 271
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRL 282
EA +YF EM++ GL+P + L G ++ + L +R L
Sbjct: 272 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL 316
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 146/305 (47%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I G C + +A + L +M G++PNVV Y+ L+ G
Sbjct: 147 VPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYAS--------- 197
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I A ++ D M G+ PD+ ++ ++ S+A K + + L ++ +G+ P
Sbjct: 198 -EGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAV 256
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ + + G++ +A + EM+ +G+ P+ Y + + A+ ++R +
Sbjct: 257 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL 316
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P++ T + I + R+ ++++ +K L D+ +Y+ LI G C++ +
Sbjct: 317 HALGV-LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 375
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
++A + EM KG+ P + L GL +S ++ R+L +K L+ +S+T+ +
Sbjct: 376 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 435
Query: 296 EFQNY 300
Y
Sbjct: 436 MIDGY 440
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 131/297 (44%), Gaps = 47/297 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V+ ++ I+G K R+ A + E+ E+G+ P+V TY+ L++G C++
Sbjct: 322 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE------ 375
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++ DEM ++GI P++ ++ ++ ++ Q + + M EKG+ P
Sbjct: 376 ----VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 431
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY++++ C + +A L EM GV P + YN D AM L+R+M
Sbjct: 432 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 491
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ KG L S+ LI G C+ K
Sbjct: 492 LQ----------------------------------KGFATTL---SFNTLIDGYCKSCK 514
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
+EA Q F EMI K ++P VT+ T+ ++ + L K++ E ++ + F
Sbjct: 515 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVF 571
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 138/305 (45%), Gaps = 29/305 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+SLI G+CK ++ A EM +G+ PN+ YN L++G+C+
Sbjct: 357 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD------ 410
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I+ A K+FD M +G+EPD ++S ++ Y ++ + + M KG+ P
Sbjct: 411 ----IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 466
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++V C G +E A L EM++ G + + ++N Y A +L+++M
Sbjct: 467 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEM 525
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRM-----------------DMVREIWNHVKGSELGL 223
+ +P+ TY +I +M D V ++ + +
Sbjct: 526 IAKQI-MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKP 584
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
D +Y ++I+ C++ EA + E++ KG+L + + L L + + L +L
Sbjct: 585 DEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLL 644
Query: 284 KKLDE 288
++ E
Sbjct: 645 DEMGE 649
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 44/274 (16%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M E+G+ PN TY ++ G+CR K + A+ F+EM+ G++PD + S
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRA----------KRMNEAKLTFEEMQKTGLKPDYNACSA 50
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ + R L + M GI + TY ++ LC G++E A E+L M+ G
Sbjct: 51 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLG 110
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV---------------------- 187
P++ T+ + Y + A++L +M++ +L
Sbjct: 111 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 170
Query: 188 ------------PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
PN+ Y+ LI + + R++ R + + + S + D+ Y +I L
Sbjct: 171 KLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCL 230
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ K +EA Y +E+ +GL P VTF G
Sbjct: 231 SKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 264
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 90/193 (46%), Gaps = 8/193 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH-PNERFEK-- 63
+ +LI G+CK +I A + EMI + + P+ VTY +++ C+ + N F++
Sbjct: 502 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 561
Query: 64 ----TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ +F++M +G++PD ++ +V++ + + + + + KG+
Sbjct: 562 ERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 621
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+ ++ LC + +A +LL EM G+ PS + + + + A +++
Sbjct: 622 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEG 681
Query: 180 MKEDDLCVPNIHT 192
+K L VP+ T
Sbjct: 682 VKSLGL-VPDTTT 693
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 130/280 (46%), Gaps = 16/280 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V+ YT L+ C+ R A GEM ERG EPNV TY VL++ +C+
Sbjct: 288 PTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCK---------- 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A K+ +EM +G+ P V F+ ++ Y + + ++ L M+ K +CP V T
Sbjct: 338 EGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRT 397
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C ++ A LL +MV + +SP TYN + A +L+R M
Sbjct: 398 YNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMI 457
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D P+ T+N + + R+ +I +K + + +YT LI G C+ K
Sbjct: 458 RDGF-SPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKI 516
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL-----IQSDML 276
+ A F M+ + LP +TF + GL +Q ML
Sbjct: 517 EHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAML 556
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 139/317 (43%), Gaps = 34/317 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ +++ +CK+ + +A F ++ P++ TY L+ G CR N+
Sbjct: 187 PNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCR------NDDV 240
Query: 62 EKT---------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
E+ + A + + MR G P V ++++++
Sbjct: 241 ERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCAL 300
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ + +L M+E+G P V TYT ++ LC GR+++A ++L EMV GV+PS
Sbjct: 301 CESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSV 360
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
+N Y R A+ + M+ +C PN+ TYN LI F MD + N
Sbjct: 361 VPFNALIGSYCKRGMMEDAVGVLGLMESKKVC-PNVRTYNELICGFCRGKSMDRAMALLN 419
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ S+L D+ +Y LIHGLCE A + F MI G P + TF L +
Sbjct: 420 KMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMG 479
Query: 275 MLRTWRRLKKKLDEESI 291
+ ++ + L E+ +
Sbjct: 480 RVGEAHQILESLKEKHV 496
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 140/293 (47%), Gaps = 40/293 (13%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N YT+LI G+CK +I+ A M+ PN +T+NV+++G+ R E
Sbjct: 499 NEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGL----------RKE 548
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+++A + ++M ++P + +++I++ + + + + LN + G P V TY
Sbjct: 549 GKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTY 608
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+ +K CS GR+E+AEE++ ++ GV + YN Y + A + R+M
Sbjct: 609 TAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFG 668
Query: 183 DDLCVPNIHTYNIL----------------IGMFMALNRMDMVR-EIWNHV--------- 216
C P+ TY+IL +G+ ++L + + +IW+ +
Sbjct: 669 TG-CEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLF 727
Query: 217 -KGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
K +E G +L++Y+ LI+GLC+ + A + M E G+ P ++ +L
Sbjct: 728 EKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSL 780
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 26/295 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
PNV+ Y LI G+C+ +D A L +M+E + P+VVTYN L++G+C + R
Sbjct: 393 PNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRL 452
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F IR+ A ++ + ++ + ++ + +++ ++ Y +
Sbjct: 453 FRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCK 512
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A K + + M + P T+ ++ L G+++DA L+ +M + V P+ T
Sbjct: 513 AGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHT 572
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN +E D + A ++ ++ PN+ TY I + + R++ E+ +
Sbjct: 573 YNILVEEVLKEYDFDRANEILNRLISSGY-QPNVVTYTAFIKAYCSQGRLEEAEEMVIKI 631
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
K + LD Y +LI+ A M G P +T+ L + L+
Sbjct: 632 KNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLV 686
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 174 MKLYRQMKEDD--LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
+ LY++M D+ PN+ T N ++ + L M + R + + E G DL +YT L
Sbjct: 171 ISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSL 230
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKK 284
+ G C + AC F M + V++ L GL ++ + L W R+++
Sbjct: 231 VLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMRE 283
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 40/178 (22%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y+ LI G CK+ R+++A M E G+ P+ + +N LL+ C+
Sbjct: 736 VPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLG------- 788
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+F E VT ++ AH L ++ A
Sbjct: 789 ----------MFGEA--------VTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEA 830
Query: 121 TYTSVVKC---------------LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163
+ S+++C L G ++ ELL M +NG ETY+ +E
Sbjct: 831 VFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQE 888
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 146/317 (46%), Gaps = 27/317 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
PN+ +T +I G CK + A L EM+ RG +PNV T+ L++G+C++ R
Sbjct: 270 PNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRL 329
Query: 61 FEKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
F K +R+ AE + M+ +G+ P+ +++ ++ +
Sbjct: 330 FLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHC 389
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A + + + +N M E+G P V TY ++V LC GR+++A ++L RNG+
Sbjct: 390 KAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKV 449
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY E+ + + A+ L+ +M + + P+IH+Y LI +F RM +
Sbjct: 450 TYTILISEHCKQAEIKQALVLFNKMVKSGI-QPDIHSYTTLIAVFCREKRMKESEMFFEE 508
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
L +YT +I G C + + A ++F M + G +T+ L GL +
Sbjct: 509 AVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSK 568
Query: 276 LRTWRRLKKKLDEESIT 292
L R L + E+ +T
Sbjct: 569 LDEARCLYDAMIEKGLT 585
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 132/305 (43%), Gaps = 43/305 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+LI G CK + A + M E G PNV TYN +++G+C++
Sbjct: 376 PNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGR------- 428
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A KV G++ D +++I++ + + + + +L N M + GI P + +
Sbjct: 429 ---VQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHS 485
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C R++++E E VR G+ P+ +TY Y + A+K + +M
Sbjct: 486 YTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRM- 544
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGS-------------------- 219
D C + TY LI +++D R +++ + KG
Sbjct: 545 SDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDG 604
Query: 220 ----------ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
E L + + L+ LC ++K A +F ++++K +VT
Sbjct: 605 CSAMVVLERLEKKLWVRTVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTA 664
Query: 270 LIQSD 274
+S+
Sbjct: 665 CYESN 669
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 133/297 (44%), Gaps = 15/297 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K ++ ++ ++ AE EM RGV+PN V+Y V++ G C+ ++ ++R+
Sbjct: 165 PSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRW 224
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
M RG D + S+++ + +L E G+ P +
Sbjct: 225 ----------LGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLIN 274
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T +++ LC G ++ A E+L EMV G P+ T+ + A +L+ ++
Sbjct: 275 FTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 334
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN+ TY +I + +M+ + + +K L + ++YT LI G C+ +
Sbjct: 335 RSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNF 394
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK-----LDEESITF 293
+ A + M E+G P T+ + GL + ++ ++ K LD + +T+
Sbjct: 395 ERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTY 451
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 5/179 (2%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M +G+ P+ T VVK + G +E AE L EM GV P+ +Y Y +
Sbjct: 158 MHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGN 217
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDS 227
+ + M E V N T ++++ F + + R +W + E+GL +L +
Sbjct: 218 VLESDRWLGGMIERGFVVDNA-TLSLIVREF--CEKGFVTRALWYFRRFCEMGLRPNLIN 274
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+T +I GLC++ K+A + EM+ +G P T L GL + RL KL
Sbjct: 275 FTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL 333
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P K YTS+I G+C+ + +A +F M + G + +TY L++G+C+++ L
Sbjct: 515 VPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLD---- 570
Query: 61 FEKTIRNAEKVFDEMRVRGIEP 82
A ++D M +G+ P
Sbjct: 571 ------EARCLYDAMIEKGLTP 586
>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
Length = 448
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 140/307 (45%), Gaps = 12/307 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YT+LI CK NR D A + M+E+ + PNV Y LL CR
Sbjct: 146 VPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCR--------- 196
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A ++F EM RG P +++ ++L + L+ D + M+ +G P
Sbjct: 197 -TRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDEN 255
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY S++ C GRI +A+ L E++ A YN + A+++
Sbjct: 256 TYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAG 315
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M D C+P + TYN LI F N +D +++ ++ + Y+ I GLC+
Sbjct: 316 MV-DKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVG 374
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
K EA ++F + +E+G +P VT+ L RGL ++ + RL +++ E +
Sbjct: 375 KINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGYIADRSLRT 434
Query: 300 YHFKPYR 306
F+ R
Sbjct: 435 LAFQRSR 441
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 140/318 (44%), Gaps = 30/318 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V L+ +C++ R+ E+ GV ++ YN +L + +F
Sbjct: 43 PDVVTCGLLVDKFCEMKRVGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKF 102
Query: 62 E---------------KTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
KT+ R A +V EM + + PD +++ ++ V +
Sbjct: 103 SDIAVGDGSLPHVLAYKTMLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCK 161
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ ++ + M EK I P V YTS++ C +++ A L EM++ G PSA T
Sbjct: 162 HNRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSAST 221
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNH 215
Y + + A ++ M+ VP+ +TY LI G MA R+ + ++
Sbjct: 222 YGLLLRCLCNGGRSYLAYDIHSSMRSRGH-VPDENTYASLIYGCCMA-GRITEAKVLFKE 279
Query: 216 V-KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
V +G + LD Y +LI GLC K +EA + M++KG +P T+ L G +++
Sbjct: 280 VLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKAN 339
Query: 275 MLRTWRRLKKKLDEESIT 292
+ +L + ++E+ +
Sbjct: 340 EVDKALQLFRAMEEKGFS 357
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 108/245 (44%), Gaps = 20/245 (8%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M+E GV P+ +YN+L+ G+ + +S + A + M G +PDV + +
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSS----------VDQARAMLSTMVGEGYDPDVVTCGL 50
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ + + + ++ G+ + Y +++K L G + + V +G
Sbjct: 51 LVDKFCEMKRVGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDG 110
Query: 150 VSPSAETY----NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
P Y +C K + R+ + ++ ++ VP+ TY LI + NR
Sbjct: 111 SLPHVLAYKTMLDCLIKTGKTREASEVVGEMIKK------SVPDGMTYTALISVLCKHNR 164
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
D ++++ + E+ ++D YT L+ C +K A + FVEMI++G P T+
Sbjct: 165 ADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGL 224
Query: 266 LYRGL 270
L R L
Sbjct: 225 LLRCL 229
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 45/91 (49%)
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+D VP+ +YN+L+ L+ +D R + + + G D+ + +L+ CE ++
Sbjct: 3 EDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVG 62
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
E C+ F E+ G+ + + + + L+ S
Sbjct: 63 EVCELFQELESNGVAVGMLAYNAILKALMCS 93
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 137/270 (50%), Gaps = 13/270 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + + LI G+C+ + + A L EM +R + P+ V+Y ++NG+C
Sbjct: 401 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHC--------- 451
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A K+ ++M G++P+V +SI++ Y+ + + + L+ M G+ P +
Sbjct: 452 -KDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFC 510
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ CL G++E+A L E+ G+ P A T+ F Y A K + +M
Sbjct: 511 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 570
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L +PN Y +LI G F A N M+ + I+ + + D+ + + IHGL + +
Sbjct: 571 DHGL-MPNNPLYTVLINGHFKAGNLMEAL-SIFRRLHALGVLPDVQTCSAFIHGLLKNGR 628
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+EA + F E+ EKGL+P T+ +L G
Sbjct: 629 VQEALKVFSELKEKGLVPDVFTYSSLISGF 658
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 139/286 (48%), Gaps = 12/286 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+SLI G+CK ++ A EM +G+ PN+ YN L++G+C+
Sbjct: 645 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD------ 698
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I+ A K+FD M +G+EPD ++S ++ Y ++ + + M KG+ P
Sbjct: 699 ----IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 754
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++V C G +E A L EM++ G + + ++N Y A +L+++M
Sbjct: 755 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEM 813
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P+ TY +I +M+ ++ ++ L +D +YT L++G + +
Sbjct: 814 IAKQI-MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQ 872
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
E F +M+ KG+ P +VT+ + + D L +L+ ++
Sbjct: 873 SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 918
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 12/290 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + + I G+ K ++ A ++ EM++ G+ PN Y VL+NG + +L
Sbjct: 541 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL------ 594
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F + G+ PDV + S +H + + Q +L + +KEKG+ P V T
Sbjct: 595 ----MEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 650
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ C G +E A EL EM G++P+ YN D A KL+ M
Sbjct: 651 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 710
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L P+ TY+ +I + + +++ + + Y L+HG C++
Sbjct: 711 EKGL-EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 769
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++A F EM++KG ++F TL G +S ++ +L +++ + I
Sbjct: 770 EKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 818
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 147/305 (48%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I G C + +A + L +M G++PNVV Y++L+
Sbjct: 435 VPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYAS--------- 485
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I A ++ D M G+ PD+ ++ ++ S+A K + + L ++ +G+ P
Sbjct: 486 -EGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAV 544
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ + + G++ +A + EM+ +G+ P+ Y + + A+ ++R++
Sbjct: 545 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRL 604
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P++ T + I + R+ ++++ +K L D+ +Y+ LI G C++ +
Sbjct: 605 HALGV-LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 663
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
++A + EM KG+ P + L GL +S ++ R+L +K L+ +S+T+ +
Sbjct: 664 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 723
Query: 296 EFQNY 300
Y
Sbjct: 724 MIDGY 728
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 143/299 (47%), Gaps = 17/299 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V+ ++ I+G K R+ A + E+ E+G+ P+V TY+ L++G C++
Sbjct: 610 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE------ 663
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++ DEM ++GI P++ ++ ++ ++ Q + + M EKG+ P
Sbjct: 664 ----VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 719
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY++++ C + +A L EM GV P + YN D AM L+R+M
Sbjct: 720 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 779
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ ++N LI + ++ +++ + ++ D +YT +I C+ K
Sbjct: 780 LQKGF--ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 837
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL---YRGLIQSDMLRTW--RRLKKKLDEESITFG 294
+EA F EM E+ L+ VT+ +L Y L QS + + + K + + +T+G
Sbjct: 838 MEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYG 896
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 139/321 (43%), Gaps = 50/321 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEP----------------------- 37
+PN YT + G C+ R++ A+ EM + G++P
Sbjct: 295 VPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLR 354
Query: 38 ------------NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVT 85
N++TYNVL++G+C +F K + AE + M G +P+
Sbjct: 355 IKDVMVSCGIPINLITYNVLIHGLC---------KFGKMEKAAE-ILKGMVTLGCKPNSR 404
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
+F +++ Y R H +L+ L+ M+++ + P+ +Y +++ LC C + A +LL +M
Sbjct: 405 TFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM 464
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+G+ P+ Y+ Y A +L M + P+I YN +I +
Sbjct: 465 TFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGV-APDIFCYNAIISCLSKAGK 523
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
M+ ++G L D ++ I G + K EA +YF EM++ GL+P +
Sbjct: 524 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 583
Query: 266 LYRGLIQS----DMLRTWRRL 282
L G ++ + L +RRL
Sbjct: 584 LINGHFKAGNLMEALSIFRRL 604
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 132/302 (43%), Gaps = 44/302 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +Y+ +I G C++ ID A M E+G+ PN TY ++ G+CR
Sbjct: 261 PNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCR---------- 310
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A+ F+EM+ G++PD + S ++ + R L + M GI + T
Sbjct: 311 AKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLIT 370
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G++E A E+L MV G P++ T+ + Y + A++L +M+
Sbjct: 371 YNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEME 430
Query: 182 EDDLCV----------------------------------PNIHTYNILIGMFMALNRMD 207
+ +L PN+ Y+ILI + + R++
Sbjct: 431 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIE 490
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
R + + + S + D+ Y +I L + K +EA Y +E+ +GL P VTF
Sbjct: 491 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 550
Query: 268 RG 269
G
Sbjct: 551 LG 552
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 120/278 (43%), Gaps = 11/278 (3%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
SL+ K +++ + M++ + +V TY L+ +C+ L R A
Sbjct: 198 SLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDL----------RGA 247
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
++V EM +G+ P+ +S+V+ + +++ M EKG+ P TYT +
Sbjct: 248 KRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAG 307
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC R+ +A+ EM + G+ P + + D + +++ M + +
Sbjct: 308 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI- 366
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
N+ TYN+LI +M+ EI + + ++ +LI G C + A +
Sbjct: 367 NLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL 426
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EM ++ L+P V++ + GL L +L +K+
Sbjct: 427 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM 464
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 13/225 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ +LI G+CK +I A + EMI + + P+ VTY +++ C+ +
Sbjct: 790 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKME---------- 839
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +F EM+ R + D +++ +++ Y++ + M KG+ P TY V+
Sbjct: 840 EANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVI 899
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C + +A +L E+V G+ ++ R+D A KL +M E L
Sbjct: 900 YAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGL- 958
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
P++ N L+ F +MD ++ VK LGL D+ T++
Sbjct: 959 KPSLAACNTLVRSFHEAGKMDEATRVFEGVK--SLGLVPDTTTLI 1001
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 103/231 (44%), Gaps = 22/231 (9%)
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-GICPTVATYTSVVKCLCSCGRIEDA 138
+ PDV VLH ++ P+ LD + + + G+ + +++ + LC+ A
Sbjct: 69 LNPDV--IRAVLH-QNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLA 125
Query: 139 EELLGEMVRNGVSPSA--ETYNCFFKEYRGRKDA---------------NGAMKLYRQMK 181
+L +M+R S S+ ++ +F+ Y G + A ++ K
Sbjct: 126 NGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAK 185
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + + I N L+ + M++ +++N + +++G D+ +YT L+ LC+
Sbjct: 186 NDSILISLIRC-NSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDL 244
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ A + +EM EKGL P + + + G+ Q + LK+ + E+ +
Sbjct: 245 RGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLV 295
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +IY CK + + A + E++ +G+ +++L+ +C+R L
Sbjct: 890 PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDL------ 943
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+ DEM G++P + + + ++ + A K + +K G+ P T
Sbjct: 944 ----TEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 999
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMV 146
+V + EDA L+ ++V
Sbjct: 1000 LIDLVNGNLNDTDSEDARNLIKQLV 1024
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 148/299 (49%), Gaps = 46/299 (15%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMI----------------------------------- 31
Y +L+YG+C++ ++MA R +MI
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 330
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
+ G+ PNV YN L++ +C+ NERF+ +A+++F EM RG+EP+ +++I++
Sbjct: 331 DLGMVPNVFAYNALIDKLCK------NERFD----DADRLFKEMAGRGLEPNEVTYAILI 380
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
H + + +L + M++KGI TV Y S++ C G ++ A LL MV+ G++
Sbjct: 381 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 440
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P+A +Y+ D + AM+L+R+M E + N +T+ LI F +MD
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNN-YTFTALINGFCKDKKMDEAAR 499
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+++ + S + + ++ ++I G C ++A Q + +M+E GL P T+ +L GL
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 144/278 (51%), Gaps = 23/278 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +LI CK R D A+R EM RG+EPN VTY +L++ +C+R
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG------- 387
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK----LNFMKEKGIC 116
I +A +FD+MR +GI+ V ++ +++ Y + Q SLD+ L+ M ++G+
Sbjct: 388 ---MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCK----QGSLDRARGLLSGMVKEGLT 440
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
PT A+Y+ ++ LC G + A EL EM G++ + T+ + K + A +L
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM--LIHG 234
+ +M + ++ +PN T+N++I + + + ++++ + E+GL D+YT LI G
Sbjct: 501 FDKMIDSNV-IPNEVTFNVMIEGYCLVGNIRKAFQLYDQM--VEMGLKPDNYTYRSLISG 557
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
LC +A ++ ++ + + L GL +
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFR 595
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 135/328 (41%), Gaps = 62/328 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN + +I G+C + I A + +M+E G++P+ TY L++G+C + +
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569
Query: 61 FEKTIRNAEKV-------------------------FDEMRVRGIEPDVTSFSIVLHVYS 95
F + N+ V +DEM VRG++ D+ SF+I+++
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629
Query: 96 RAHKPQLSLDKLNFMKEKGI-----------------------------------CPTVA 120
+ H + S MKE+G+ P
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTV 689
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T ++ LC G + AE L EM+ V P+ TYNCF + D A L+ M
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L +I ++NILI ++ ++ + S D SY+ +IH LC+
Sbjct: 750 LQGHLA--SIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGD 807
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYR 268
+A + + EM+ KGL P V + R
Sbjct: 808 INKAFELWNEMLYKGLKPDVVAYNIFIR 835
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y L+YG CK R+ A M+ GV + VTY L+ G CR E E +R
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM------EELEMALR 289
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ +M G P + S ++ + + + + + G+ P V Y +++
Sbjct: 290 ----ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 345
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC R +DA+ L EM G+ P+ TY R A+ L+ +M++ +
Sbjct: 346 DKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIK 405
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
V ++ YN LI + +D R + + + L SY+ LI GLC A +
Sbjct: 406 V-TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAME 464
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM E+G+ TF L G + + RL K+ + ++
Sbjct: 465 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 141/300 (47%), Gaps = 21/300 (7%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+YT+ I +C+ +D A + M GV+ + V YNVL+ G+C+ N R +
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCK------NMR----V 249
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+ A +V + M G+ D ++ +++ + R + +++L + M G P+ A + +
Sbjct: 250 QEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFM 309
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ L +E+A L ++ G+ P+ YN + + + A +L+++M L
Sbjct: 310 IDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGL 369
Query: 186 CVPNIHTYNILIGMFMALNRMDMVRE---IWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
PN TY ILI AL + M+ + +++ ++ + + + Y LI+G C++
Sbjct: 370 -EPNEVTYAILI---HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
A M+++GL P ++ L GL ++ L + L +++ E I + NY F
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIA----WNNYTF 481
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +T LI CK + AE EM+ V PN TYN L+
Sbjct: 686 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFAT---------- 735
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A+ + M ++G + SF+I++ +A K Q ++D + + E G P +
Sbjct: 736 EGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCIS 794
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ LC G I A EL EM+ G+ P YN F + +++ A+ +Y M
Sbjct: 795 YSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMI 854
Query: 182 EDDLCVPNIHTYNILI 197
+ PN TY L+
Sbjct: 855 RSGV-QPNWDTYRALL 869
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 123/292 (42%), Gaps = 13/292 (4%)
Query: 3 NVKMYTS--LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
V YT+ +++ KI + +A +M++ GV + Y + C
Sbjct: 160 TVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE--------- 210
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A + M G++ ++++++ + + Q +++ N M G+
Sbjct: 211 -SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V C +E A + +M+R G PS + E R ++ A L ++
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + VPN+ YN LI R D ++ + G L + +Y +LIH LC++
Sbjct: 330 GDLGM-VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM 388
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
++A F +M +KG+ + +L G + L R L + +E +T
Sbjct: 389 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 440
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ ++ + LI G CK +I A + ++ E G P+ ++Y+ +++ +C+ + N+
Sbjct: 754 LASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDI--NKA 811
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
FE +++EM +G++PDV +++I + + + +L M G+ P
Sbjct: 812 FE--------LWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWD 863
Query: 121 TYTSVVK 127
TY +++
Sbjct: 864 TYRALLS 870
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 96/248 (38%), Gaps = 36/248 (14%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI + + S +L + + L+ D + M + G+ YT+ ++ C ++ A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ M GV SA YN A+++ M + + TY L+
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV-TYRTLVY 276
Query: 199 MFMALNRMDMVREIWNHV---------------------------------KGSELGL-- 223
F + ++M I + + K +LG+
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
++ +Y LI LC+ +++ +A + F EM +GL P +VT+ L L + M+ L
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396
Query: 284 KKLDEESI 291
K+ ++ I
Sbjct: 397 DKMRDKGI 404
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 12/198 (6%)
Query: 107 LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRG 166
L GI T + ++ L + A +L +M+++GV Y + Y
Sbjct: 151 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 210
Query: 167 RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
++ +GA L +M+ + + + YN+L+ R+ E+ N + + D
Sbjct: 211 SRNLDGARGLVVRMESEGVKASAV-PYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+Y L++G C ++ + A + +MI G +P + + D LR KK+L
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMI------DELR-----KKEL 318
Query: 287 DEESITFGSEFQNYHFKP 304
EE+ + + + P
Sbjct: 319 VEEAFSLACKLGDLGMVP 336
>gi|115451461|ref|NP_001049331.1| Os03g0208600 [Oryza sativa Japonica Group]
gi|26006498|gb|AAN77307.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108706773|gb|ABF94568.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547802|dbj|BAF11245.1| Os03g0208600 [Oryza sativa Japonica Group]
Length = 531
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 14/261 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + + L+ GW + AE F+ EM E GVEP++VTYN L++ C+
Sbjct: 218 NRQTFNILLSGW---KSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCK----------N 264
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ + NA K+ DEMR + I PDV +++ ++ +P + L M E G P V Y
Sbjct: 265 RGVENAYKLLDEMREKDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAY 324
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ ++ R+ DA L+ EM G+ P+A TYN FF+ Y D A +LY +M+
Sbjct: 325 NTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNLFFRCYYWAYDIGSAWQLYERMRS 384
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ C PN + ++ + R+ E+W+ + + G +L LC++ K
Sbjct: 385 EG-CFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLD 443
Query: 243 EACQYFVEMIEKGLLPQKVTF 263
EA + F +MIE G P V F
Sbjct: 444 EAERCFHQMIELGQKPSNVAF 464
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
EDAE + EM GV P TYN + + A KL +M+E D+ P++ TY
Sbjct: 233 EDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDIS-PDVITYTS 291
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
LIG + + D + + + ELG D+ +Y I ++ +A EM
Sbjct: 292 LIGGLGLIGQPDKAKHLLKEMH--ELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMAS 349
Query: 254 KGLLPQKVTFETLYR 268
KGL+P T+ +R
Sbjct: 350 KGLMPNATTYNLFFR 364
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 138/306 (45%), Gaps = 26/306 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+ Y +I CK ++ A + +MIE G P+VVTYN +++G+C+
Sbjct: 78 PSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLL 137
Query: 52 -----RASLHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R PN R TI A +VF EM + I PD S+ I++ ++
Sbjct: 138 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAK 197
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A K + M + GI P+ TY V+ +C +++A EL M G PS T
Sbjct: 198 AGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFT 257
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N + R + A +L ++M DD VP++ TY+ LI ++ R+D R + +
Sbjct: 258 FNILIDAHCKRGKLDEAFRLLKRMT-DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + + LIHGLC+ + KEA + M+ G P VT+ TL G ++
Sbjct: 317 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 376
Query: 277 RTWRRL 282
R L
Sbjct: 377 ERAREL 382
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 23/280 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y++LI G C I R+D A L +M++R +P VVT N L++G+C+
Sbjct: 287 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR------ 340
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I+ A +V D M G PDV +++ ++H + RA + + + + L+ M +G+ P V
Sbjct: 341 ----IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 396
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT++V LC R+ +A + +M +G +P+ TY + +G +KL+ +M
Sbjct: 397 TYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM 456
Query: 181 KEDDLCV---PNIHTYNILIGMFMALNR----MDMVREIWNHVKGSELGLDLDSYTMLIH 233
+C P+ Y L R ++++RE ++ G ++ Y +
Sbjct: 457 ----VCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV--YRFAVD 510
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
GL E K + A + +M+ G LP +L GL +S
Sbjct: 511 GLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKS 550
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 133/289 (46%), Gaps = 11/289 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI G K +++ A +++ GV P+ V Y L++G+C
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLC----------M 57
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A ++F +M RG P ++++++ + + + D + M E G P V T
Sbjct: 58 ANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 117
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V+ LC R+E+A L EM R G +P+ ++N + + A +++ +M+
Sbjct: 118 YNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D+ P+ +Y ILI +++ +++ + S + +Y ++IHG+C
Sbjct: 178 AKDI-PPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTL 236
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
EA + F M KG P + TF L + L RL K++ ++
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDG 285
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 1/218 (0%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
M R + PD S+ I++ ++A K + + + G+ P+ YTS++ LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+DA EL +M R G PS TYN R A L ++M ED VP++ TYN
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGH-VPDVVTYN 119
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
++ +R++ ++N ++ + S+ +I GLC++ K +ACQ F EM K
Sbjct: 120 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAK 179
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ P ++ L GL ++ L +L +++ + IT
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGIT 217
>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 139/282 (49%), Gaps = 32/282 (11%)
Query: 3 NVKMYTSLIYGWCK-INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+ K + ++ GWC I AER EM GV+ +VV+Y+ +++ + SL+
Sbjct: 225 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLN----- 279
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK----EKGICP 117
K+FD M+ IEPD ++ V+H ++A + N MK EKGI P
Sbjct: 280 -----KVLKLFDRMKKECIEPDRKVYNAVVHALAKA---SFVSEARNLMKTMEEEKGIEP 331
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V TY S++K LC + E+A+++ EM+ G+ P+ TY+ F + R ++ +
Sbjct: 332 NVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKM 391
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
R+M C P + TY +LI D V +W+ +K +G DL SY ++IHGL
Sbjct: 392 RKMG----CEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFL 447
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 279
K +EA Y+ EM +KG+ P + DM+++W
Sbjct: 448 NGKIEEAYGYYKEMKDKGMRPNENV----------EDMIQSW 479
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI CK + + A++ EM+E+G+ P + TY+ F
Sbjct: 331 PNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHA----------------F 374
Query: 62 EKTIRNAEKVFD---EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ +R E+VF+ +MR G EP V ++ +++ R L + MKEK + P
Sbjct: 375 MRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPD 434
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
+++Y ++ L G+IE+A EM G+ P+ + + G++ A
Sbjct: 435 LSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYA 486
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 138/285 (48%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + ++ C R AE+ L EM+ +G P+VVT+N+L+N +CR+ L
Sbjct: 84 PNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLG----- 138
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M G P+ S++ +LH + + K ++ L M +G P + T
Sbjct: 139 -----RAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G+++ A ELL ++ G SP TYN + A++L +M+
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P++ TY+ LI +++ + ++ V+G + + +Y ++ GLC+ Q+
Sbjct: 254 GKGL-KPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQT 312
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A + MI KG P +V++ L G+ + + L +L
Sbjct: 313 DRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 142/303 (46%), Gaps = 22/303 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT LI C + + A + L EM RG +P+VVTYNVL+NG+C+ L
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLD----- 68
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K + M G +P+V + +I+L + + L M KG P+V T
Sbjct: 69 -----EAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVT 123
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G + A ++L +M +G +P++ +YN + K + A++ Y ++
Sbjct: 124 FNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQ-YLEIM 182
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P+I TYN ++ ++D E+ N + L +Y +I GL + K
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
+A + EM KGL P +T+ +L GL + + EE+I F + + +
Sbjct: 243 DQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKV-----------EEAIKFFHDVEGFG 291
Query: 302 FKP 304
KP
Sbjct: 292 VKP 294
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 1/223 (0%)
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+V D + PDV +++I++ ++ L+ M +G P V TY +V +
Sbjct: 2 EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C GR+++A + L M G P+ T+N + A KL +M C P+
Sbjct: 62 CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKG-CSPS 120
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+ T+NILI + +I + + SY L+HG C+++K A QY
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
M+ +G P VT+ T+ L + + L +L + +
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCS 223
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 134/271 (49%), Gaps = 12/271 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YT+LI G+ K +++D A + L M+ +G EP VTY +++G C+
Sbjct: 465 VPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKL-------- 516
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A++V +MR RG EP + F+ +L Y + + + L M +G P V
Sbjct: 517 --DMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVI 574
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YTS++ L S GR+ +A + M+ G +P A TY + + + A ++ M
Sbjct: 575 LYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELM 634
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P+ YN L+ ++ L R+D +++ + S + + ++ +L+HGL + K
Sbjct: 635 AKSGVG-PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGK 693
Query: 241 WKEACQYFVEMIEKGLLPQK-VTFETLYRGL 270
A F EM+EK +P V++ L GL
Sbjct: 694 TDRAFSLFKEMLEKDEVPPTLVSYTILIDGL 724
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 17/285 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YTS+I+G+CK +D + L EM+ G P+ Y VL++ +C+
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGR------- 174
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++F+ MR G D +F ++ S K + + M E+G P +
Sbjct: 175 ---VDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEV 231
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
S++ LC G++++A E+ +V V+ S YN Y + +KL QM
Sbjct: 232 QDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMV 291
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E D P+I TYNIL+ F NR+D E++ + + +YT +I GL + Q+
Sbjct: 292 ECD-NFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRM 350
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+EA +F E ++ +++ T+ +GL S + L +KL
Sbjct: 351 EEAKAFFDEALD------VISYTTVIKGLADSKRIDEACELFEKL 389
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 145/304 (47%), Gaps = 22/304 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +++ SLI+ CK ++D A ++ + V + V YN L++G C+
Sbjct: 227 PYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGR------- 279
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + K+ +M PD+ +++I++ +SRA++ +L+ + G P AT
Sbjct: 280 ---VDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAAT 336
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++++ L R+E+A+ E + +Y K K + A +L+ ++K
Sbjct: 337 YTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRIDEACELFEKLK 390
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN+ Y +I + R++ + + + GS +YT++I GLC+ Q
Sbjct: 391 TAG-CSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQML 449
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGSE 296
+AC+ F +M++KG +P +T+ TL G ++ + R+ L K + ++T+GS
Sbjct: 450 PDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSI 509
Query: 297 FQNY 300
+
Sbjct: 510 VHGF 513
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 138/325 (42%), Gaps = 45/325 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT++I G K RI+ + +M P TY V+++G+C+ A + P+
Sbjct: 396 PNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCK-AQMLPD--- 451
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A KVF++M +G PD +++ ++ +S+A K + L+ M KG PT T
Sbjct: 452 ------ACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVT 505
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+V C I +A+E++ +M G P + Y + A A ++ +M
Sbjct: 506 YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 565
Query: 182 ED-------------DL---------------------CVPNIHTYNILIGMFMALNRMD 207
DL C P+ TY +I F + ++
Sbjct: 566 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 625
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
EI + S +G D +Y L+ G + ++ +A + M+ G+ P VTF L
Sbjct: 626 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 685
Query: 268 RGLIQSDML-RTWRRLKKKLDEESI 291
GL + R + K+ L+++ +
Sbjct: 686 HGLFKDGKTDRAFSLFKEMLEKDEV 710
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 47/258 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V ++ G CK +ID A EM G EP +V+YN +++G+ AS+
Sbjct: 17 MPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGL---ASID---- 69
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K F+ M G EPDV +F+ ++H + +A +PQ+ LN K P V
Sbjct: 70 ---KMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLN-QALKRFRPDVF 125
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YTSV+ C G ++ ++L EM+ G
Sbjct: 126 LYTSVIHGYCKAGDLDTGFKILEEMLAAG------------------------------- 154
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C+P+ Y +LI L R+D E++ ++ S D ++ LI L K
Sbjct: 155 -----CIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGK 209
Query: 241 WKEACQYFVEMIEKGLLP 258
EAC+ + EMIE+G P
Sbjct: 210 LDEACELYREMIERGYEP 227
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 12/215 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y SL+ G+ K+ R+D A M+ G++PN VT+NVL++G+ +
Sbjct: 641 PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG-------- 692
Query: 62 EKTIRNAEKVFDEMRVRG-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
KT R A +F EM + + P + S++I++ +A + + + M ++GI P
Sbjct: 693 -KTDR-AFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECH 750
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS++ L GRI +A++L+ +MV+ GV+P + Y+ + A ++++M
Sbjct: 751 TYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEM 810
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+ C PN TY +L F A R + + H
Sbjct: 811 MKRG-CAPNEVTYKVLRRGFRAAGRALDLEAVKQH 844
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 137/350 (39%), Gaps = 69/350 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P Y S+++G+CK++ I+ A+ + +M ERG EP + + LL+ + +
Sbjct: 501 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 560
Query: 62 --EKTIRN-----------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E T R A VFD M +G PD ++ ++ +S+
Sbjct: 561 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSK 620
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + L M + G+ P Y S++ R++ A + MV +G+ P+A T
Sbjct: 621 IGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVT 680
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLC------------------------------ 186
+N + A L+++M E D
Sbjct: 681 FNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEM 740
Query: 187 -----VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+P HTY LI R+ +++ + + D+ +Y+ LI GL +
Sbjct: 741 IDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMV 800
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A F EM+++G P +VT++ L RG +R + LD E++
Sbjct: 801 DTAWDVFQEMMKRGCAPNEVTYKVLRRG---------FRAAGRALDLEAV 841
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 2/164 (1%)
Query: 103 SLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
+LD L M G+ P V V+ LC +I+ A EL EM G P+ +YN
Sbjct: 4 ALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVIS 63
Query: 163 EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222
+ A K + M D+ C P++ + LI F + + + N
Sbjct: 64 GLASIDKMDEAYKFFNSMI-DNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL-KRFR 121
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D+ YT +IHG C+ + EM+ G +P + L
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVL 165
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P YTSLIY K RI A++ + +M++ GV P+V Y+ L+ G+ +
Sbjct: 746 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSS------- 798
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
+ A VF EM RG P+ ++ ++ + RA L L+ + +G+
Sbjct: 799 ---MVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF-RAAGRALDLEAVKQHFSQGV 849
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A+ ++M L +P++ NI++ ++D E++ + + SY +I
Sbjct: 4 ALDCLKEMHTTGL-MPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVI 62
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
GL K EA ++F MI+ G P + F TL G ++
Sbjct: 63 SGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKA 103
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 141/290 (48%), Gaps = 16/290 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +T +I G C+ R+D A L + G EP+ VTYNV ++G+C+
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCK---------- 54
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + +A ++ +M + P +++ ++ +A + ++ L M EKG PT+ T
Sbjct: 55 AERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKT 114
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
YT V+ L GR+E+A + +M+ NG P A Y K A LY++
Sbjct: 115 YTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEAN 174
Query: 181 --KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLC 236
K VP++ TY LI R+ R++++ + E G D +YT +I GLC
Sbjct: 175 ARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDD-EAVERGFIPDAVTYTSIIDGLC 233
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ + +E C+ F EM +G P VT+ L G +++ M+ R+ +++
Sbjct: 234 KLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM 283
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 22/303 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YTS+I G CK+ R++ EM RG EP+ VTY L++G +
Sbjct: 219 IPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMK--------- 269
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K I A +V+ +M G +++I+L +A + + M+E+G TV
Sbjct: 270 -AKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVV 328
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY--- 177
TY++++ CS G + A EL M+ G P+ +YN RG A K Y
Sbjct: 329 TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIII---RGLCRAGKLAKAYFYF 385
Query: 178 RQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
++ + LC P+++T+N + G+ L+ + E++ + +L SY++L+ G+C
Sbjct: 386 EKLLQRRLC-PDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGIC 444
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKKLDEESIT 292
+ A + F EM+ +G+ P V F TL R L + + L +R L+++ ++ +
Sbjct: 445 RAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWS 504
Query: 293 FGS 295
+ S
Sbjct: 505 YWS 507
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 126/283 (44%), Gaps = 22/283 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +K YT +I G K R++ A R +M+ G P+ Y L+ G+C+ S P E +
Sbjct: 110 PTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCK--SGKPEEAY 167
Query: 62 EKTIRNAEKVFDEMRVR----GIEPDVTSFSIVLHVYSRAHK----PQLSLDKLNFMKEK 113
++ E R PDV +++ ++ +A + Q+ D+ E+
Sbjct: 168 --------ALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDE---AVER 216
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGA 173
G P TYTS++ LC GR+E+ E EM G P A TY + K A
Sbjct: 217 GFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKA 276
Query: 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
++YRQM + V + TYNI++ R+ + ++ + +Y+ L+
Sbjct: 277 HRVYRQMLQSGTVVSTV-TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMD 335
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
G C + A + F M+++G P V++ + RGL ++ L
Sbjct: 336 GFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKL 378
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 60/212 (28%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE- 59
+ V Y++L+ G+C + A M++RG EPN+V+YN+++ G+CR L
Sbjct: 324 VATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYF 383
Query: 60 RFEK-------------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
FEK T+ + ++F+ M +G P++ S+SI++
Sbjct: 384 YFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGI 443
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC------------------------ 130
RA +++L+ M +G+ P V + ++++ LC
Sbjct: 444 CRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAW 503
Query: 131 ----------SCGRIEDAEELLGEMVRNGVSP 152
C R+E+A L M G +P
Sbjct: 504 SYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
C P++ + ++I R+D + + D +Y + I GLC+ ++ +A
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
Q +M EK LP VT+ L GL+++ L
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRL 93
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%)
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
D+ ++T++I+GLC +++ EA + G P VT+ GL +++ + +L
Sbjct: 6 DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65
Query: 284 KKLDEE 289
KK+DE+
Sbjct: 66 KKMDEK 71
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 134/271 (49%), Gaps = 12/271 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YT+LI G+ K +++D A + L M+ +G EP VTY +++G C+
Sbjct: 210 VPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKL-------- 261
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A++V +MR RG EP + F+ +L Y + + + L M +G P V
Sbjct: 262 --DMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVI 319
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YTS++ L S GR+ +A + M+ G +P A TY + + + A ++ M
Sbjct: 320 LYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELM 379
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P+ YN L+ ++ L R+D +++ + S + + ++ +L+HGL + K
Sbjct: 380 AKSGVG-PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGK 438
Query: 241 WKEACQYFVEMIEKGLLPQK-VTFETLYRGL 270
A F EM+EK +P V++ L GL
Sbjct: 439 TDRAFSLFKEMLEKEEVPPTLVSYTILIDGL 469
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 131/276 (47%), Gaps = 28/276 (10%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G EP +V+YN +++G+ AS+ + A K F+ M G EPDV +F+ ++H
Sbjct: 2 GCEPTIVSYNTVISGL---ASID-------KMDEAYKFFNSMIDNGCEPDVIAFTTLIHG 51
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ +A +PQ+ LN K P V YTSV+ C G ++ V+P
Sbjct: 52 FCKAGQPQVGHKLLN-QALKRFRPDVFLYTSVIHGYCKAGDLDTG-------YFRAVTPK 103
Query: 154 AE----TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
A +Y K K + A +L+ ++K C PN+ Y +I + R++
Sbjct: 104 ASLDVISYTTVIKGLADSKRIDEACELFEELKTAG-CSPNVVAYTAVIDGLLKAGRIEDG 162
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + + GS +YT++I GLC+ Q +AC+ F +M++KG +P +T+ TL G
Sbjct: 163 LKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDG 222
Query: 270 LIQSDMLRTWRR-----LKKKLDEESITFGSEFQNY 300
++ + R+ L K + ++T+GS +
Sbjct: 223 FSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGF 258
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 138/325 (42%), Gaps = 45/325 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT++I G K RI+ + EM P TY V+++G+C+ A + P+
Sbjct: 141 PNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCK-AQMLPD--- 196
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A KVF++M +G PD +++ ++ +S+A K + L+ M KG PT T
Sbjct: 197 ------ACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVT 250
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+V C I +A+E++ +M G P + Y + A A ++ +M
Sbjct: 251 YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 310
Query: 182 ED-------------DL---------------------CVPNIHTYNILIGMFMALNRMD 207
DL C P+ TY +I F + ++
Sbjct: 311 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 370
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
EI + S +G D +Y L+ G + ++ +A + M+ G+ P VTF L
Sbjct: 371 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 430
Query: 268 RGLIQSDML-RTWRRLKKKLDEESI 291
GL + R + K+ L++E +
Sbjct: 431 HGLFKDGKTDRAFSLFKEMLEKEEV 455
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 128/299 (42%), Gaps = 48/299 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y ++I G I+++D A +F MI+ G EP+V+ + L++G C+
Sbjct: 5 PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG--- 61
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS----------RAHKPQLSLDKLNF-- 109
K + A K F PDV ++ V+H Y RA P+ SLD +++
Sbjct: 62 HKLLNQALKRF--------RPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTT 113
Query: 110 --------------------MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+K G P V YT+V+ L GRIED + EM +
Sbjct: 114 VIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS 173
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P+ TY + A K++ QM + CVP+ TY LI F ++MD
Sbjct: 174 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG-CVPDTITYTTLIDGFSKASKMDEA 232
Query: 210 REIWNHV--KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
R++ + + KG E +Y ++HG C+ EA + +M E+G P F +L
Sbjct: 233 RKLLDVMLTKGPE--PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 289
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 137/350 (39%), Gaps = 69/350 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P Y S+++G+CK++ I+ A+ + +M ERG EP + + LL+ + +
Sbjct: 246 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 305
Query: 62 --EKTIRN-----------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E T R A VFD M +G PD ++ ++ +S+
Sbjct: 306 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSK 365
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + L M + G+ P Y S++ R++ A + MV +G+ P+A T
Sbjct: 366 IGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVT 425
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKE---------------------------------- 182
+N + A L+++M E
Sbjct: 426 FNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEM 485
Query: 183 -DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D +P HTY LI R+ +++ + + D+ +Y+ LI GL +
Sbjct: 486 IDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMV 545
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A F EM+++G P +VT++ L RG +R + LD E++
Sbjct: 546 DTAWDVFQEMMKRGCAPNEVTYKVLRRG---------FRAAGRALDLEAV 586
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 12/215 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y SL+ G+ K+ R+D A M+ G++PN VT+NVL++G+ +
Sbjct: 386 PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG-------- 437
Query: 62 EKTIRNAEKVFDEMRVRG-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
KT R A +F EM + + P + S++I++ +A + + + M ++GI P
Sbjct: 438 -KTDR-AFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECH 495
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS++ L GRI +A++L+ +MV+ GV+P + Y+ + A ++++M
Sbjct: 496 TYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEM 555
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+ C PN TY +L F A R + + H
Sbjct: 556 MKRG-CAPNEVTYKVLRRGFRAAGRALDLEAVKQH 589
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P YTSLIY K RI A++ + +M++ GV P+V Y+ L+ G+ +
Sbjct: 491 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSS------- 543
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
+ A VF EM RG P+ ++ ++ + RA L L+ + +G+
Sbjct: 544 ---MVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF-RAAGRALDLEAVKQHFSQGV 594
>gi|125542844|gb|EAY88983.1| hypothetical protein OsI_10467 [Oryza sativa Indica Group]
Length = 525
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 14/261 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + + L+ GW + AE F+ EM E GVEP++VTYN L++ C+
Sbjct: 212 NRQTFNILLSGW---KSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCK----------N 258
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ + NA K+ DEMR + I PDV +++ ++ +P + L M E G P V Y
Sbjct: 259 RGVENAYKLLDEMREKDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAY 318
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ ++ R+ DA L+ EM G+ P+A TYN FF+ Y D A +LY +M+
Sbjct: 319 NTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNLFFRCYYWAYDIGSAWQLYERMRS 378
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ C PN + ++ + R+ E+W+ + + G +L LC++ K
Sbjct: 379 EG-CFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLD 437
Query: 243 EACQYFVEMIEKGLLPQKVTF 263
EA + F +MIE G P V F
Sbjct: 438 EAERCFHQMIELGQKPSNVAF 458
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
EDAE + EM GV P TYN + + A KL +M+E D+ P++ TY
Sbjct: 227 EDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDIS-PDVITYTS 285
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
LIG + + D + + + ELG D+ +Y I ++ +A EM
Sbjct: 286 LIGGLGLIGQPDKAKHLLKEMH--ELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMAS 343
Query: 254 KGLLPQKVTFETLYR 268
KGL+P T+ +R
Sbjct: 344 KGLMPNATTYNLFFR 358
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 134/285 (47%), Gaps = 21/285 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y LI C+ +R+D A + L EM +G P+ V++ +++G+C+ + F
Sbjct: 155 PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGF 214
Query: 62 --------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
E + V +EM RG++P+V +++ ++ + +A + +
Sbjct: 215 LAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELR 274
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
++ L M G P V T+T++VK G++ DA + MV G +PS +YN
Sbjct: 275 MACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLI 334
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
+ D GA+ + MK + L +PN TY+ L+ F +D IWN +K S
Sbjct: 335 RGLCCIGDLKGALDFFNSMKRNAL-LPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGC 393
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ YT +I LC+K + +A +M+ P VTF TL
Sbjct: 394 KPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTL 438
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 144/339 (42%), Gaps = 49/339 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P Y ++++ C R+ + EM++RG++PNVVTY +++ C+
Sbjct: 219 VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCK--------- 269
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +R A + M G P+V +F+ ++ + K +L ++M ++G P+
Sbjct: 270 -ARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTI 328
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y +++ LC G ++ A + M RN + P+A TY+ + D +GAM ++ +M
Sbjct: 329 SYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM 388
Query: 181 KED----------------------------------DLCVPNIHTYNILIGMFMALNRM 206
K D C PN T+N LIG R+
Sbjct: 389 KSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRV 448
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+++ ++ + + +Y L+HGL + K+A +EM+ G VT+ T+
Sbjct: 449 GRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTV 508
Query: 267 YRGLIQ-----SDMLRTWRRLKKKLDEESITFGSEFQNY 300
L Q ML R + + + ++ TF + Y
Sbjct: 509 INCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAY 547
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 123/288 (42%), Gaps = 20/288 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V++Y L+ + N + M + GV+PNV TYN+L+ +C+ N+R
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQ------NDRV 173
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+ DEM +G PD S ++ + + + + F+ E P A+
Sbjct: 174 DA----ARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVE---EARGFLAET--VPVQAS 224
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +VV LC R+ + ++ EMV+ G+ P+ TY + ++ A + +M
Sbjct: 225 YNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMV 284
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN+ T+ L+ F ++ +W+ + SY +LI GLC
Sbjct: 285 SMG-CTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDL 343
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR----TWRRLKKK 285
K A +F M LLP T+ TL G + L W +K
Sbjct: 344 KGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSS 391
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 123/273 (45%), Gaps = 11/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y++L+ G+ +D A EM G +PNVV Y +++ +C++
Sbjct: 359 LPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM------M 412
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F++ AE + D+M + P+ +F+ ++ + +L+ + M+ G P
Sbjct: 413 FDQ----AESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDR 468
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ L G +DA ++ EM+ NG S TYN AM L +M
Sbjct: 469 TYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRM 528
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P+ T+N +I + ++ + + + ++ +YT+LI LC + K
Sbjct: 529 MVQGI-QPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGK 587
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
A Y ++M+ +G+ P + T+ L R + +
Sbjct: 588 LSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 620
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 97/242 (40%), Gaps = 60/242 (24%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
PNV +YT++I CK D AE + +M+ PN VT+N L+ +C
Sbjct: 395 PNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNV 454
Query: 51 ----RRASLHPNER-----------------------------FEKTI------------ 65
RR HPN+R FE ++
Sbjct: 455 FHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQ 514
Query: 66 ----RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A + M V+GI+PD +F+ ++H Y + K ++ L M V
Sbjct: 515 MCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVA 574
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ LC+ G++ +A L +M+ G+ P+ T+N + G + L++ +
Sbjct: 575 YTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFKYIV 634
Query: 182 ED 183
ED
Sbjct: 635 ED 636
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 98/248 (39%), Gaps = 55/248 (22%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+P V YN LL+ + R E + V+D MR G++P+V ++++++
Sbjct: 119 DPGVRVYNHLLDALLR----------ENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALC 168
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + L+ M KG P ++ ++V +C GR+E+A L E V P
Sbjct: 169 QNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQA 223
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+YN +H L G F RM V + N
Sbjct: 224 SYNAV-----------------------------VHA---LCGEF----RMWEVFSVVNE 247
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-- 273
+ L ++ +YT ++ C+ ++ + AC M+ G P +TF L +G +
Sbjct: 248 MVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGK 307
Query: 274 --DMLRTW 279
D L W
Sbjct: 308 VHDALSMW 315
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 71/151 (47%)
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ + V+ L + G ++ + L EM GV+ + + + A+ A+K + +
Sbjct: 54 HEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRAS 113
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P + YN L+ + N + V ++++++ + + ++ +Y +LI LC+ +
Sbjct: 114 DLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRV 173
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
A + EM KG P +V+ T+ G+ +
Sbjct: 174 DAARKMLDEMSRKGCHPDEVSHGTIVSGMCK 204
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 139/282 (49%), Gaps = 32/282 (11%)
Query: 3 NVKMYTSLIYGWCK-INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+ K + ++ GWC I AER EM GV+ +VV+Y+ +++ + SL+
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLN----- 319
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK----EKGICP 117
K+FD M+ IEPD ++ V+H ++A + N MK EKGI P
Sbjct: 320 -----KVLKLFDRMKKECIEPDRKVYNAVVHALAKA---SFVSEARNLMKTMEEEKGIEP 371
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V TY S++K LC + E+A+++ EM+ G+ P+ TY+ F + R ++ +
Sbjct: 372 NVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKM 431
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
R+M C P + TY +LI D V +W+ +K +G DL SY ++IHGL
Sbjct: 432 RKMG----CEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFL 487
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 279
K +EA Y+ EM +KG+ P + DM+++W
Sbjct: 488 NGKIEEAYGYYKEMKDKGMRPNENV----------EDMIQSW 519
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI CK + + A++ EM+E+G+ P + TY+ F
Sbjct: 371 PNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHA----------------F 414
Query: 62 EKTIRNAEKVFD---EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ +R E+VF+ +MR G EP V ++ +++ R L + MKEK + P
Sbjct: 415 MRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPD 474
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
+++Y ++ L G+IE+A EM G+ P+ + + G++ A
Sbjct: 475 LSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYA 526
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 150/330 (45%), Gaps = 61/330 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y SLI G+CK + A G++ G+ P+V+TYN+LL+G CR L R
Sbjct: 369 LPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARR 428
Query: 61 FE----------------------KTIRNAEKV---FDEMRVRGIEPDVTSFS------I 89
F+ + +RN V FDEM +G++PD +++ +
Sbjct: 429 FKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAEL 488
Query: 90 VLHVYSRAHKPQ-------LSLDKLNF----------------------MKEKGICPTVA 120
+L S A + +S D + + M G+ P
Sbjct: 489 ILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCI 548
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ C GR+ +A ++ M+ +G+ PSA TY F Y R + A +++M
Sbjct: 549 TYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKM 608
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E+ + PN TYN+LI + R ++ + ++ + L + +YT+LI G C++
Sbjct: 609 LEEGV-RPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGN 667
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
W+EA + + EM + G+ P T L++G
Sbjct: 668 WEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 145/323 (44%), Gaps = 32/323 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIER--GVEPNVVTYNVLLNGVCRRASLHPNE 59
P++ Y +L+ + + R+D A + L EM R G P+ VTYNV++NG+ R+ L
Sbjct: 229 PSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAA 288
Query: 60 RFEKTIRNAEKV----FD--------------------EMRVRGIEPDVTSFSIVLHVYS 95
+ +R ++K F+ EM GI P V +++ ++H
Sbjct: 289 QLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMF 348
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
R+ + + K M+ G+ P + TY S++ C G +++A L G++ R G++PS
Sbjct: 349 RSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVL 408
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN Y D A + ++M E C P++ TY IL+ + + MVRE ++
Sbjct: 409 TYNILLDGYCRLGDLEEARRFKQEMVEQG-CQPDVSTYTILMNGSRKVRNLAMVREFFDE 467
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ L D +Y I EA Q MI +G+ VT+ GL +S
Sbjct: 468 MLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGN 527
Query: 276 LRT----WRRL-KKKLDEESITF 293
L+ W ++ L + IT+
Sbjct: 528 LKDAYVLWMKMVSDGLQPDCITY 550
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 26/295 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC---------- 50
+P V Y ++I+G + ++ A EM G+ P+++TYN L+NG C
Sbjct: 334 VPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALW 393
Query: 51 -----RRASLHP-----NERFEKTIR-----NAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+RA L P N + R A + EM +G +PDV++++I+++
Sbjct: 394 LFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSR 453
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + + M KG+ P Y + + G +A +L M+ G+S
Sbjct: 454 KVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTV 513
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN F + A L+ +M D L P+ TY LI R+ R+I++
Sbjct: 514 TYNIFLDGLCKSGNLKDAYVLWMKMVSDGL-QPDCITYTCLIHAHCERGRLREARDIFDG 572
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ S L +YT+ IH C + A +F +M+E+G+ P +VT+ L L
Sbjct: 573 MLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHAL 627
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 121/265 (45%), Gaps = 16/265 (6%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
EM GV P + N++L + R E + V+ EM GIEP + +++
Sbjct: 186 EMAHHGVPPFIKECNLVLRAL----------RDEARWDDMRSVYAEMLQLGIEPSIVTYN 235
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEK--GICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
+L + R + + L M+ + G P+ TY V+ L G +E A +L+ M
Sbjct: 236 TLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM- 294
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNR 205
R SA T+N Y R A L +M E++ VP + TYN +I GMF + N
Sbjct: 295 RMSKKASAFTFNPLITGYFARGSVEKAGALQLEM-ENEGIVPTVVTYNTIIHGMFRSGN- 352
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
++ R + ++ L DL +Y LI+G C+ KEA F ++ GL P +T+
Sbjct: 353 VEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNI 412
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEES 290
L G + L RR K+++ E+
Sbjct: 413 LLDGYCRLGDLEEARRFKQEMVEQG 437
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 8/193 (4%)
Query: 95 SRAHKPQ------LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
+RA P L L M G+ P + V++ L R +D + EM++
Sbjct: 166 TRARNPAPSTCSTLCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQL 225
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE-DDLCVPNIHTYNILIGMFMALNRMD 207
G+ PS TYN + + A KL R+M+ C+P+ TYN++I ++
Sbjct: 226 GIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELE 285
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
++ + ++ S+ ++ LI G + ++A +EM +G++P VT+ T+
Sbjct: 286 KAAQLVDRMRMSKKASAF-TFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTII 344
Query: 268 RGLIQSDMLRTWR 280
G+ +S + R
Sbjct: 345 HGMFRSGNVEAAR 357
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 30/67 (44%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT LI G CK + A R EM + G+ P+ T+N L G S H +
Sbjct: 650 PNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEGQSKHAIQYM 709
Query: 62 EKTIRNA 68
E + A
Sbjct: 710 ENVVLGA 716
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 137/275 (49%), Gaps = 7/275 (2%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
PNV Y +I G K +D A EM+ +G PN+VTYN +++G+C+ ++ E
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196
Query: 61 ----FEK-TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
F+K + A ++ +M G++PDV ++S+++ Y + + + + + M +G
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P TY +++ + G + D +LL M+++G+ +N + Y + + AM
Sbjct: 257 NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMT 316
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
+ +M++ PN+ TY +I + R++ ++ + L D+ ++T LIHGL
Sbjct: 317 AFIEMRQKGFS-PNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGL 375
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
C +WK+ + EMI +G+ P + T+ L
Sbjct: 376 CTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSL 410
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 142/298 (47%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +TSLI+G C I E+ EMI RG+ PN + N +++ +C+
Sbjct: 363 PDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCK---------- 412
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A FD++ G++PDV S++I++ Y K S+ L M G+ P T
Sbjct: 413 EGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVT 472
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C GR++DA L EM V P+A TYN A + Y ++
Sbjct: 473 YSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIV 532
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + I+TYNI++G + +D ++ ++ E L++ ++ ++I GL + +
Sbjct: 533 DSGIQL-GINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRI 591
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+A F ++ GL+P + + + + I+ +L L +++ T S N
Sbjct: 592 GDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLN 649
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 148/305 (48%), Gaps = 18/305 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT++I CK R++ A +M+ G+ P+++T+ L++G+C
Sbjct: 328 PNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEW------ 381
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ EK+ EM RGI P+ + ++ + + + D + + G+ P V +
Sbjct: 382 ----KKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVS 437
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ C G+++++ +LLG MV G+ P TY+ Y + A+ LYR+M
Sbjct: 438 YTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMF 497
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D+ PN TYNI++ G+F A R+ RE + + S + L +++Y +++ GLCE
Sbjct: 498 SKDV-KPNAITYNIILHGLFHA-GRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSF 555
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGS 295
EA + F + K + TF + GL++ + + L L ++I +G
Sbjct: 556 VDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGL 615
Query: 296 EFQNY 300
Q++
Sbjct: 616 MIQSH 620
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 140/318 (44%), Gaps = 26/318 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL---H-- 56
P+V Y+ LI +CKI R A M+ RG P+ TY LL+G + +L H
Sbjct: 223 PDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDL 282
Query: 57 ---------PNERF-----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P E +T+ A F EMR +G P+V +++ V+ + +
Sbjct: 283 LALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCK 342
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + ++ + M +G+ P + T+TS++ LC+ G + E+L EM+ G+ P+A
Sbjct: 343 AGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIF 402
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
N A + Q+ + P++ +Y ILI + +MD ++ +
Sbjct: 403 LNTIMDSLCKEGRVLEAHDFFDQIIHVGV-KPDVVSYTILIDGYCLDGKMDESIKLLGRM 461
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
L D +Y+ L++G C+ + +A + EM K + P +T+ + GL + +
Sbjct: 462 VSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRV 521
Query: 277 RTWRRLKKKLDEESITFG 294
R K+ + I G
Sbjct: 522 VAAREFYMKIVDSGIQLG 539
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y++L+ G+CK R+D A EM + V+PN +TYN++L+G+ + F
Sbjct: 468 PDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREF 527
Query: 62 EKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
I + A ++F +R + + +V +F+I++ +
Sbjct: 528 YMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLK 587
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + + G+ P Y +++ G +E+++EL M +NG + ++ T
Sbjct: 588 VGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRT 647
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
N ++ + D A ++ E + V
Sbjct: 648 LNAIVRKLLEKGDVRRAGTYLTKIDEKEYSV 678
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 39/224 (17%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-------SRAHKPQLSLDKLNFMKEKGI-- 115
+ +A +FDE+ R V +F+ VL V S+ H L++ N M + G+
Sbjct: 30 LEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNK 89
Query: 116 -CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
T+ +++C C+ G ++ A E +E RG + A
Sbjct: 90 LATDACTFGILIRCFCNVGLLDFALE---------------------EESRGSRAA---- 124
Query: 175 KLYRQMKEDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
M +D C PN+ +YN++I +D +++ + G ++ +Y +I
Sbjct: 125 --VHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVID 182
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKV-TFETLYRGLIQSDML 276
GLC+ Q +A +M +KG L + V + + G +Q D++
Sbjct: 183 GLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVV 226
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 103/260 (39%), Gaps = 27/260 (10%)
Query: 22 MAERFLGEMIERGVE---PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
+A M + GV + T+ +L+ C L + E+ R + M
Sbjct: 74 LAVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLL--DFALEEESRGSRAAVHMMADD 131
Query: 79 GIE--PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
G P+V S+++V++ + + + + M +G P + TY SV+ LC ++
Sbjct: 132 GYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMD 191
Query: 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
AE +L +M G A++L ++M L P++ TY++L
Sbjct: 192 KAEAVLQQMFDKG-------------------QLEEAVRLLKKMSGGGL-QPDVVTYSLL 231
Query: 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
I + + R R I++ + D +Y L+HG K + MI+ G+
Sbjct: 232 IDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGI 291
Query: 257 LPQKVTFETLYRGLIQSDML 276
+ F L R +++ L
Sbjct: 292 PLEDHVFNILIRAYAKNETL 311
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 139/284 (48%), Gaps = 17/284 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT++I G CK +D A+ +MI+RGV+P+ TYN L++G
Sbjct: 194 PNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKW------ 247
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY---SRAHKPQLSLDKLNFMKEKGICPT 118
+ ++ +EM G+EPD +++++L R + +L D M KGI P
Sbjct: 248 ----KEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDS---MFRKGIKPD 300
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
VA Y ++ + G + + L MV NGVSP+ +N F Y + AM ++
Sbjct: 301 VAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFN 360
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M++ L P++ ++ LI L R+D +N + + ++ ++ L++GLC
Sbjct: 361 KMRQQGLS-PDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTV 419
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
KW++A + F E++++G+ V F TL L + +RL
Sbjct: 420 GKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRL 463
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 136/297 (45%), Gaps = 26/297 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
P+ Y L+ CK R A F M +G++P+V Y +LL+G + +L
Sbjct: 264 PDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSF 323
Query: 57 ----------PNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN R + I A +F++MR +G+ PDV SF ++ +
Sbjct: 324 LDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCK 383
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ ++ + N M +G+ P + ++S+V LC+ G+ E AEEL E++ G+ A
Sbjct: 384 LGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVF 443
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N A +L M + PN+ +YN L+ R+D ++ + +
Sbjct: 444 FNTLMCNLCNEGRVMEAQRLIDLMIRVGV-RPNVISYNTLVAGHCLTGRIDEAAKLLDVM 502
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ L + +YT+L+ G C+ ++ +A F EM+ KG+ P T+ T+ GL Q+
Sbjct: 503 VSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQT 559
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 13/302 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ +L+ C R+ A+R + MI GV PNV++YN L+ G C I
Sbjct: 444 FNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHC----------LTGRID 493
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A K+ D M G++P+ +++I+L Y +A + + M KG+ P VATY +++
Sbjct: 494 EAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTIL 553
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
L GR +A EL M+ + TYN + A K++R++ D
Sbjct: 554 HGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQ 613
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+ ++ T+NI+IG + R + +++ + L D+ +Y ++ L E+ E
Sbjct: 614 LDSV-TFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDG 672
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLI-QSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPY 305
F M + G P L R L+ + D+ R L KLDE++ + + + Y
Sbjct: 673 LFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYL-YKLDEKNFSLEASTTSMLISLY 731
Query: 306 RR 307
R
Sbjct: 732 SR 733
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 133/299 (44%), Gaps = 15/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+ LI +C++ R++ G +++ G NV+ + LL G+C
Sbjct: 88 PNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDA--------- 138
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + + M G PDV +++ V++ + R + + + + M ++GI P V T
Sbjct: 139 KRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVT 198
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+V+ LC ++ A+ + +M+ GV P TYNC Y +++ +M
Sbjct: 199 YTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMS 258
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+ TY +L+ R R ++ + + D+ Y +L+HG K
Sbjct: 259 THGL-EPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGAL 317
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFGS 295
E + M+ G+ P + F ++ + +I+ M + ++ L + ++FG+
Sbjct: 318 SEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGA 376
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 10/235 (4%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG------ICPTVAT 121
A K+FDE+ V +F+ +L V SRA S ++ + P T
Sbjct: 33 ALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACT 92
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ C C GR+E G +++ G + + K K + A +
Sbjct: 93 YSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRM 152
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P++ YN +I F +++ ++ + + ++ +YT +I GLC+ Q
Sbjct: 153 SEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVV 212
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSE 296
A F +MI++G+ P T+ L G + + W+ + + L+E S T G E
Sbjct: 213 DRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTG---KWKEVVQMLEEMS-THGLE 263
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 96/234 (41%), Gaps = 46/234 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEP------------------------ 37
PN YT L+ G+CK R+D A EM+ +GV P
Sbjct: 509 PNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANEL 568
Query: 38 -----------NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTS 86
++ TYN++LNG+C+ + A K+F + + + D +
Sbjct: 569 YLNMINSRTKCDIYTYNIILNGLCK----------NNFVDEAFKMFRRLCSKDPQLDSVT 618
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F+I++ + + + ++D + G+ P V TY + + L G + + + L M
Sbjct: 619 FNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAME 678
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
++G +P++ N + R D + A ++ E + + T ++LI ++
Sbjct: 679 KSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSL-EASTTSMLISLY 731
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 134/285 (47%), Gaps = 21/285 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y LI C+ +R+D A + L EM +G P+ V++ +++G+C+ + F
Sbjct: 102 PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGF 161
Query: 62 --------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
E + V +EM RG++P+V +++ ++ + +A + +
Sbjct: 162 LAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELR 221
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
++ L M G P V T+T++VK G++ DA + MV G +PS +YN
Sbjct: 222 MACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLI 281
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
+ D GA+ + MK + L +PN TY+ L+ F +D IWN +K S
Sbjct: 282 RGLCCIGDLKGALDFFNSMKRNAL-LPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGC 340
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ YT +I LC+K + +A +M+ P VTF TL
Sbjct: 341 KPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTL 385
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 144/339 (42%), Gaps = 49/339 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P Y ++++ C R+ + EM++RG++PNVVTY +++ C+
Sbjct: 166 VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCK--------- 216
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +R A + M G P+V +F+ ++ + K +L ++M ++G P+
Sbjct: 217 -ARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTI 275
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y +++ LC G ++ A + M RN + P+A TY+ + D +GAM ++ +M
Sbjct: 276 SYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM 335
Query: 181 KED----------------------------------DLCVPNIHTYNILIGMFMALNRM 206
K D C PN T+N LIG R+
Sbjct: 336 KSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRV 395
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+++ ++ + + +Y L+HGL + K+A +EM+ G VT+ T+
Sbjct: 396 GRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTV 455
Query: 267 YRGLIQ-----SDMLRTWRRLKKKLDEESITFGSEFQNY 300
L Q ML R + + + ++ TF + Y
Sbjct: 456 INCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAY 494
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 123/288 (42%), Gaps = 20/288 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V++Y L+ + N + M + GV+PNV TYN+L+ +C+ N+R
Sbjct: 67 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQ------NDRV 120
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+ DEM +G PD S ++ + + + + F+ E P A+
Sbjct: 121 DA----ARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVE---EARGFLAET--VPVQAS 171
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +VV LC R+ + ++ EMV+ G+ P+ TY + ++ A + +M
Sbjct: 172 YNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMV 231
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN+ T+ L+ F ++ +W+ + SY +LI GLC
Sbjct: 232 SMG-CTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDL 290
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR----TWRRLKKK 285
K A +F M LLP T+ TL G + L W +K
Sbjct: 291 KGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSS 338
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 140/333 (42%), Gaps = 63/333 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
PNV +T+L+ G+ + ++ A M++ G P+ ++YNVL+ G+C
Sbjct: 237 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDF 296
Query: 51 ----RRASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+R +L PN T+ + A +++EM+ G +P+V ++ ++ V +
Sbjct: 297 FNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCK 356
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ ++ M P T+ +++ LC CGR+ A + M RNG P+ T
Sbjct: 357 KMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRT 416
Query: 157 YN----CFFKEYRGRKDA---------NG-----------------------AMKLYRQM 180
YN F+E KDA NG AM L +M
Sbjct: 417 YNELLHGLFRE-GNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRM 475
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P+ T+N +I + ++ + + + ++ +YT+LI LC + K
Sbjct: 476 MVQGI-QPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGK 534
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
A Y ++M+ +G+ P + T+ L R + +
Sbjct: 535 LSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 567
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 97/242 (40%), Gaps = 60/242 (24%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
PNV +YT++I CK D AE + +M+ PN VT+N L+ +C
Sbjct: 342 PNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNV 401
Query: 51 ----RRASLHPNER-----------------------------FEKTI------------ 65
RR HPN+R FE ++
Sbjct: 402 FHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQ 461
Query: 66 ----RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A + M V+GI+PD +F+ ++H Y + K ++ L M V
Sbjct: 462 MCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVA 521
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ LC+ G++ +A L +M+ G+ P+ T+N + G + L++ +
Sbjct: 522 YTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFKYIV 581
Query: 182 ED 183
ED
Sbjct: 582 ED 583
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 98/248 (39%), Gaps = 55/248 (22%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+P V YN LL+ + R E + V+D MR G++P+V ++++++
Sbjct: 66 DPGVRVYNHLLDALLR----------ENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALC 115
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + L+ M KG P ++ ++V +C GR+E+A L E V P
Sbjct: 116 QNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQA 170
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+YN +H L G F RM V + N
Sbjct: 171 SYNAV-----------------------------VHA---LCGEF----RMWEVFSVVNE 194
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-- 273
+ L ++ +YT ++ C+ ++ + AC M+ G P +TF L +G +
Sbjct: 195 MVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGK 254
Query: 274 --DMLRTW 279
D L W
Sbjct: 255 VHDALSMW 262
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 67/144 (46%)
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
L + G ++ + L EM GV+ + + + A+ A+K + + + P
Sbjct: 8 LPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDP 67
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
+ YN L+ + N + V ++++++ + + ++ +Y +LI LC+ + A +
Sbjct: 68 GVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKML 127
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQ 272
EM KG P +V+ T+ G+ +
Sbjct: 128 DEMSRKGCHPDEVSHGTIVSGMCK 151
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + ++ C R AER L +M+ +G P+VVT+N+L+N +CR+
Sbjct: 312 PNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRK--------- 362
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A V ++M G P+ S++ +LH + + K +++ L M +G P + T
Sbjct: 363 -RLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT 421
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G+ + A E+L ++ G SP TYN A +L +M+
Sbjct: 422 YNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMR 481
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I TY+ L+ ++D +I++ ++G + +Y ++ GLC+ Q+
Sbjct: 482 RKGL-KPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQT 540
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A + M+EKG P K T+ L G+
Sbjct: 541 SRAIDFLAYMVEKGCKPTKATYTILIEGI 569
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 153/327 (46%), Gaps = 38/327 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+P+V Y LI G+CK ID A + L M V P+VVTYN +L +C L
Sbjct: 174 VPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAME 230
Query: 56 ----------HPNE-----RFEKT-----IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+P+ E T + A K+ DEMR +G +PDV +++++++
Sbjct: 231 VLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 290
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + ++ LN M G P V T+ +++ +CS GR DAE LL +M+R G SPS
Sbjct: 291 KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVV 350
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
T+N ++ A+ + +M + C+PN +YN L+ F +MD E
Sbjct: 351 TFNILINFLCRKRLLGRAIDVLEKMPKHG-CMPNSLSYNPLLHGFCQEKKMDRAIEYLEI 409
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ--- 272
+ D+ +Y L+ LC+ K A + ++ KG P +T+ T+ GL +
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 469
Query: 273 ----SDMLRTWRRLKKKLDEESITFGS 295
+++L RR K L + IT+ +
Sbjct: 470 TEYAAELLEEMRR--KGLKPDIITYST 494
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 26/297 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+V YT LI C + + A + L EM ++G +P+VVTYNVL+NG+C+ L
Sbjct: 242 PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKF 301
Query: 56 ---------HPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN I +AE++ +M +G P V +F+I+++ R
Sbjct: 302 LNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCR 361
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++D L M + G P +Y ++ C +++ A E L MV G P T
Sbjct: 362 KRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT 421
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN A+ A+++ Q+ C P + TYN +I + + + E+ +
Sbjct: 422 YNTLLTALCKDGKADAAVEILNQLSSKG-CSPVLITYNTVIDGLTKVGKTEYAAELLEEM 480
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ L D+ +Y+ L+ GL + K EA + F +M + P VT+ + GL ++
Sbjct: 481 RRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKA 537
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 137/305 (44%), Gaps = 49/305 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V TSLI G+C+ + A R + + G P+V+TYNVL+ G C+
Sbjct: 139 IPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGE------ 192
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A +V + M V PDV +++ +L + K + +++ L+ ++ P V
Sbjct: 193 ----IDKALQVLERMSV---APDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVI 245
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT +++ C+ + A +LL EM + G P TYN + A+K M
Sbjct: 246 TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 305
Query: 181 KEDDLCVPNIHTYNILI------GMFMALNRM--DMVRE-----------IWNHV-KGSE 220
C PN+ T+NI++ G +M R+ DM+R+ + N + +
Sbjct: 306 PLYG-CQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRL 364
Query: 221 LGLDLD---------------SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
LG +D SY L+HG C+++K A +Y M+ +G P VT+ T
Sbjct: 365 LGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNT 424
Query: 266 LYRGL 270
L L
Sbjct: 425 LLTAL 429
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 121/253 (47%), Gaps = 16/253 (6%)
Query: 25 RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84
+FL MI +G P+V+ L+ G CR R A ++ + + G PDV
Sbjct: 128 KFLERMIYQGDIPDVIACTSLIRGFCRSGK----------TRKATRIMEILENSGAVPDV 177
Query: 85 TSFSIVLHVYSRAHKPQLSLDK-LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLG 143
++++++ Y ++ + +DK L ++ + P V TY ++++ LC G++++A E+L
Sbjct: 178 ITYNVLIGGYCKSGE----IDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLD 233
Query: 144 EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL 203
++ P TY + AMKL +M++ C P++ TYN+LI
Sbjct: 234 RQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG-CKPDVVTYNVLINGICKE 292
Query: 204 NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
R+D + N++ ++ ++ +++ +C +W +A + +M+ KG P VTF
Sbjct: 293 GRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTF 352
Query: 264 ETLYRGLIQSDML 276
L L + +L
Sbjct: 353 NILINFLCRKRLL 365
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 100/197 (50%), Gaps = 11/197 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN Y L++G+C+ ++D A +L M+ RG P++VTYN LL +C+
Sbjct: 381 MPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADA--- 437
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++ +++ +G P + +++ V+ ++ K + + + L M+ KG+ P +
Sbjct: 438 -------AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDII 490
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+++++ L G++++A ++ +M + PSA TYN + + A+ M
Sbjct: 491 TYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYM 550
Query: 181 KEDDLCVPNIHTYNILI 197
E C P TY ILI
Sbjct: 551 VEKG-CKPTKATYTILI 566
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 125/291 (42%), Gaps = 38/291 (13%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS-------------LHPNERFEKT 64
NR+ + + ++ V T N LNG+ +S N K
Sbjct: 58 NRVSAVSKSEASGMNGRLQQIVSTPNGDLNGIGMESSSPNGVNGSRSFEEFASNIHLRKL 117
Query: 65 IRNAE-----KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+RN E K + M +G PDV + + ++ + R+ K + + + ++ G P V
Sbjct: 118 VRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDV 177
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK-LYR 178
TY ++ C G I+ A ++L M V+P TYN + AM+ L R
Sbjct: 178 ITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDR 234
Query: 179 QMKEDDLCVPNIHTYNILI-------GMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
QM+ + C P++ TY ILI G+ A+ +D +R+ KG + D+ +Y +L
Sbjct: 235 QMQRE--CYPDVITYTILIEATCNDSGVGQAMKLLDEMRK-----KGCK--PDVVTYNVL 285
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
I+G+C++ + EA ++ M G P +T + R + + RL
Sbjct: 286 INGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERL 336
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 150/308 (48%), Gaps = 46/308 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT +I G+C+ + A R EM+ G P+VVTYN LLNG+C+
Sbjct: 13 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK--------- 63
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY-----------------SRAHKP--- 100
E+ + +AE + +EMR RG+ PD+ +F+ ++H Y ++ +P
Sbjct: 64 -ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122
Query: 101 -----------QLSLDKLNF----MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
Q LDK N M + I P TY+ ++ C G++EDA L EM
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+ G+ P+ TYN K Y + + K ++M + + P++ TYN LI ++ ++
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVS-PDLITYNTLIHGYIKEDK 241
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
M ++ N ++ ++ D+ +Y MLI+G +EA F +M KG+ P + T+ +
Sbjct: 242 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 301
Query: 266 LYRGLIQS 273
+ G + +
Sbjct: 302 MINGHVTA 309
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 130/258 (50%), Gaps = 11/258 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +T+LI+G+C ++D A + M+ + + P++VTYN L++G+CR+ L
Sbjct: 84 PDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLD----- 138
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++D+M R I P+ ++SI++ + + + + L+ M KGI P + T
Sbjct: 139 -----KANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 193
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++K C G + ++ L +M+ N VSP TYN Y + A KL M+
Sbjct: 194 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 253
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + P++ TYN+LI F + I+ + + D +Y +I+G
Sbjct: 254 KEKV-QPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 312
Query: 242 KEACQYFVEMIEKGLLPQ 259
KEA Q EM+++G P
Sbjct: 313 KEAFQLHDEMLQRGFAPD 330
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
EMR G+ PD +++V+ + RA +L + M G P V TY +++ LC
Sbjct: 6 EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 65
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
R+ DAE LL EM GV P T+ Y + A++L+ M L P+I TY
Sbjct: 66 RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL-RPDIVTY 124
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N LI +D ++W+ + E+ + +Y++LI CEK + ++A + EMI
Sbjct: 125 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 184
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
KG+LP +T+ ++ +G +S + ++ +K+
Sbjct: 185 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 217
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 31/324 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH-PNER 60
P+V Y +LI G+ K N+++ A R L M RG P+VVTYN+++ C R L E
Sbjct: 136 PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI 195
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
FE+ +++ A K+ DEM +G+EPD +++ ++ +
Sbjct: 196 FEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCK 255
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + L + +G P + TY +++ L S G+ + E+L+ EM+ G P+ T
Sbjct: 256 EMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVT 315
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
++ A+ L R MKE L P+ + Y+ LI F R+D+ E ++
Sbjct: 316 HSILIGTLCRDGKVEEAVNLLRSMKEKGL-KPDAYCYDPLIAGFCREGRLDLATEFLEYM 374
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DM 275
D+ +Y ++ GLC K +A + F ++ E G P ++ TL+ L S D
Sbjct: 375 ISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDR 434
Query: 276 LRT----WRRLKKKLDEESITFGS 295
R + L + +D + IT+ S
Sbjct: 435 YRALEMILKLLNQGIDPDEITYNS 458
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 129/269 (47%), Gaps = 12/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + T LI G+ I A R + E++ER +P+V YN L++G + L
Sbjct: 102 PDVILCTKLIKGFFNSRNIGKATRVM-EILERYGKPDVFAYNALISGFIKANQLE----- 155
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA +V D M+ RG PDV +++I++ + K L+L+ + + PTV T
Sbjct: 156 -----NANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVIT 210
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ G I+ A +LL EM+ G+ P TYN + + A +L R +
Sbjct: 211 YTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLS 270
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P+I TYNIL+ ++ + ++ + + ++ ++++LI LC K
Sbjct: 271 SRG-CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKV 329
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+EA M EKGL P ++ L G
Sbjct: 330 EEAVNLLRSMKEKGLKPDAYCYDPLIAGF 358
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 17/272 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y ++I G CK +D A L + RG +P+++TYN+LL + R
Sbjct: 241 PDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWS----- 295
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK+ EM G +P+V + SI++ R K + +++ L MKEKG+ P
Sbjct: 296 -----EGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYC 350
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C GR++ A E L M+ +G P YN A+ A++++ ++
Sbjct: 351 YDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLD 410
Query: 182 EDDLCVPNIHTYNILIGMFMAL-NRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLCEK 238
E C PN+ +YN L F AL + D R + +K G+D D +Y LI LC
Sbjct: 411 EVG-CPPNVSSYNTL---FSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRD 466
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA + V+M P V++ + GL
Sbjct: 467 GMVDEAIELLVDMQSGRYRPNVVSYNIILLGL 498
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 25/181 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-HPNER 60
P+ Y LI G+C+ R+D+A FL MI G P++V YN ++ G+CR E
Sbjct: 346 PDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEV 405
Query: 61 FEK--------TIRNAEKVF-------DEMRV---------RGIEPDVTSFSIVLHVYSR 96
FEK + + +F D R +GI+PD +++ ++ R
Sbjct: 406 FEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCR 465
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+++ L M+ P V +Y ++ LC R DA E+L M G P+ T
Sbjct: 466 DGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETT 525
Query: 157 Y 157
Y
Sbjct: 526 Y 526
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 2 PNVKMYTSLIYG-WCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
PNV Y +L W +R E L +++ +G++P+ +TYN L++ +CR
Sbjct: 416 PNVSSYNTLFSALWSSGDRYRALEMIL-KLLNQGIDPDEITYNSLISCLCR--------- 465
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A ++ +M+ P+V S++I+L + ++ +++ L M EKG P
Sbjct: 466 -DGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNET 524
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEM 145
TY +++ + G +A EL +
Sbjct: 525 TYILLIEGIGFSGLRAEAMELANSL 549
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 145/299 (48%), Gaps = 11/299 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I G+CKI+ + A L + + +G P+ VTY L+NG+C
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCA--------- 340
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A ++F+E + +GI+PD+ ++ ++ +L +N M E+G P +
Sbjct: 341 -EGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQ 399
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY V+ LC G I DA ++ + + G P T+N Y R + A++L +M
Sbjct: 400 TYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 459
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + P+ TYN ++ +++ V E + + + +Y +LI C K
Sbjct: 460 WEYGI-APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK 518
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+EA + V+M ++GL P V+F TL G ++ L L +KL+E+ + ++ N
Sbjct: 519 MEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFN 577
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 46/297 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +Y SL+ G C I A + + EM E G P++ TYN+++NG+C+ +
Sbjct: 361 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN------- 413
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I +A V ++ ++G PDV +F+ ++ Y + K +L + M E GI P T
Sbjct: 414 ---ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 470
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRK------------ 168
Y SV+ LC G++ + E EM+ G P+ TYN + + R K
Sbjct: 471 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 530
Query: 169 ----------------------DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
D GA L+++++E T+N LIG F M
Sbjct: 531 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSA-TADTFNTLIGAFSGKLNM 589
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
M +I++ + D +Y +LI G C+ A + VEMI+KG +P TF
Sbjct: 590 HMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 646
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 136/299 (45%), Gaps = 17/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + +++ CK + A LG++I+RG+ N+ TYN+ + G+C L
Sbjct: 187 PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRL------ 240
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ D MR + PDV +++ ++ + PQ ++ L M +G P T
Sbjct: 241 ----PEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 295
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +++A ELL + V G P TY D A++L+ + +
Sbjct: 296 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 355
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I YN L+ + ++ N + D+ +Y ++I+GLC+
Sbjct: 356 AKGI-KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFGS 295
+A + I KG LP TF TL G + L + +L +++ E ++IT+ S
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 473
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 134/291 (46%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +LI G CK + A +L M+ +G P+ TYN +++G C+ +
Sbjct: 255 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKIS------- 307
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A ++ + +G PD ++ +++ + +L+ N + KGI P +
Sbjct: 308 ---MVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIV 364
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y S+VK LC G I A +++ EM G P +TYN + + A +
Sbjct: 365 VYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDA 424
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+P++ T+N LI + ++D ++ + + D +Y +++GLC+ K
Sbjct: 425 IMKGY-LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGK 483
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
E + F EMI KG P +T+ L +S+ + ++ K+ +E +
Sbjct: 484 VNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 534
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 22/272 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P Y +++ D A + M+ GV P++ T+ + L C A H R
Sbjct: 86 PAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRL 145
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + + RG V ++V +Y+ H + + M + P +A
Sbjct: 146 LRALPH----------RGA---VAYCTVVCGLYAHGHTHD-ARQLFDQMLHTHVFPNLAA 191
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ V+ LC G + +A LLG++++ G+S + TYN + + A++L M+
Sbjct: 192 FNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR 251
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK---GSELGLDLDSYTMLIHGLCEK 238
VP++ TYN LI L + M +E ++++ D +Y +I G C+
Sbjct: 252 A--YAVPDVVTYNTLI---RGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKI 306
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+EA + + + KG +P +VT+ +L GL
Sbjct: 307 SMVQEATELLKDAVFKGFVPDQVTYCSLINGL 338
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 25/176 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
PN Y LI +C+ N+++ A + + +M + G+ P+ V++N L+ G CR L
Sbjct: 501 PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLL 560
Query: 57 -----------PNERFEKTI---------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ F I AEK+FDEM +G D ++ +++ +
Sbjct: 561 FQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCK 620
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+ L M +KG P+++T+ V+ L R+ A ++ MV+ GV P
Sbjct: 621 TANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/192 (18%), Positives = 84/192 (43%), Gaps = 5/192 (2%)
Query: 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+ Y+RA + + ++D M P Y +++ L + A ++ M+ GV
Sbjct: 60 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
SP T+ + + + A++L R + + ++ G++ + D R
Sbjct: 120 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHD-AR 174
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++++ + + + +L ++ ++H LC++ EA ++I++G+ T+ RGL
Sbjct: 175 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 234
Query: 271 IQSDMLRTWRRL 282
++ L RL
Sbjct: 235 CEAGRLPEAVRL 246
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI G C+ A R EMIE+ + P VV Y +L+ G+C
Sbjct: 191 PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG---------- 240
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I AE +F MR G+ P++ +++ ++ Y + + +L+ M G+ P V T
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC + A + L +M GV P+ YNC Y + + A+ L+ +++
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ +P++ TY+ILI ++RM+ + +K + +Y LI G C++
Sbjct: 361 KHEI-LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
++A + +M EKG+ P +TF TL G
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDG 447
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 136/270 (50%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y +++ G+CKI + A EM+ G+ PNVVT+ +L++G+C+
Sbjct: 260 LPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCK--------- 310
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +A K +M G+ P++ ++ ++ Y +A +L + +++ I P V
Sbjct: 311 -TDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVF 369
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+ ++K LC R+E+A+ LL EM + G P+A TYN Y + A+++ QM
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + PNI T++ LI + +M+ ++ + L D+ +YT LI G +
Sbjct: 430 TEKGI-EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
KEA + EM E GL P T L GL
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V +YT LI G C +RI AE M G+ PN+ TYN +++G C+ A
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH------- 278
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A +++ EM G+ P+V +F I++ + + + L M G+ P +
Sbjct: 279 ---VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C G + +A L E+ ++ + P TY+ K G A L ++MK
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PN TYN LI + M+ E+ + + + ++ +++ LI G C+ K
Sbjct: 396 KKGF-LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ A + EM+ KGLLP V + L G + + RL K++ E +
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P ++ ++ G K R D + G+M+ RG PNVVTY L++G CR+
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGD------ 208
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F K R +FDEM + I P V ++I++ + + M+ G+ P +
Sbjct: 209 FLKAFR----LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLY 264
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ C ++ A EL EM+ +G+ P+ T+ + A K M
Sbjct: 265 TYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ VPNI YN LI + + + + ++ E+ D+ +Y++LI GLC +
Sbjct: 325 ASFGV-VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES-----ITFGS 295
+EA EM +KG LP VT+ TL G + + + ++ E+ ITF +
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 296 EFQNY 300
Y
Sbjct: 444 LIDGY 448
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y +LI G+CK ++ A +M E+G+EPN++T++ L++G C+ +
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEA--- 456
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++ EM ++G+ PDV +++ ++ + + + + M+E G+ P V
Sbjct: 457 -------AMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T + ++ LC GRI DA +L + + G + N + + + A+ L+R +
Sbjct: 510 TLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSL--YQMCSLALSLFRGI 565
Query: 181 KEDDLCV 187
E +CV
Sbjct: 566 SEPCICV 572
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
+ P + V+ L GR + ++ G+MV G SP+ TY + D A
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
+L+ +M E + P + Y ILI +R+ ++ ++ S + +L +Y ++ G
Sbjct: 214 RLFDEMIEKKI-FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDG 272
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
C+ K+A + + EM+ GLLP VTF L GL ++D + + R+
Sbjct: 273 YCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKF 320
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 105/272 (38%), Gaps = 58/272 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMA--------------------ERFLGEMIE------RGV 35
PNV + LI G CK RI A +R L +M RG+
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGI 565
Query: 36 -EPNVVTYNV---LLNGVCRRASLH-------PNERFEKTIR--NAEKV--FDEMRVRGI 80
EP + V +A LH N+ ++ ++ N KV F + +R
Sbjct: 566 SEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKN 625
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDK------LNFMKEKGICPTVATYTSVVKCLCSCGR 134
+ SFS++ + + K L K +NF G P + TS++ + G
Sbjct: 626 PSSIDSFSLMFALKACTLKSSLVEGKQMHALVINF----GFEPIIFLQTSLISMYSATGN 681
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+ DA + E+ S + ++ Y + N A++L+RQM+ DD+ P+I T
Sbjct: 682 VADAHNMFDEIP----SKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDV-QPDIVTVT 736
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
+ + L +DM W H GLD D
Sbjct: 737 VALSACADLGALDMGE--WIHAYIRHRGLDTD 766
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 135/276 (48%), Gaps = 27/276 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y +LI G+C++ ++ A R EM+E+G P+V TY +L+NG
Sbjct: 417 PTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNG------------- 463
Query: 62 EKTIRN---AEKVFDEMRVRGIEPDVTSFSIVL---HVYSRAHKPQLSLDKLNFMKEKGI 115
+RN A + FDEM +G++PD +++ + + HK + M KGI
Sbjct: 464 SHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHK---AFQLREVMMLKGI 520
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P TY ++ LC G ++DA++L +MV +G+ P TY C + R + A K
Sbjct: 521 YPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARK 580
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIH 233
L M D L P++ TY ILI R ++ K ++G++ + +Y +LIH
Sbjct: 581 LLNGMVSDGL-QPSVVTYTILI--HTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIH 637
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
LC + A +F EM+E+GL P K T+ L G
Sbjct: 638 ALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDG 673
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 139/316 (43%), Gaps = 27/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG--VEPNVVTYNVLLNGVCRRASLHPNE 59
P + Y +L+ + K R D A L EM +G N VTYNV+++ + R L
Sbjct: 241 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAA 300
Query: 60 RFEKTIRNAEKVFD------------------------EMRVRGIEPDVTSFSIVLHVYS 95
+ ++R ++K EM GI P + +++ ++H
Sbjct: 301 KLVDSMRLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLL 360
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
++ + + + K M+ G+ P + TY S++ C G +++A LLG++ R G++P+
Sbjct: 361 KSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVL 420
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN Y A +L +M E C P++ TY IL+ + + M RE ++
Sbjct: 421 TYNTLIDGYCRLGGLEEARRLKEEMVEQG-CFPDVCTYTILMNGSHKVRNLPMAREFFDE 479
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ L D +Y I +A Q M+ KG+ P VT+ + GL ++
Sbjct: 480 MLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 539
Query: 276 LRTWRRLKKKLDEESI 291
L+ + LK K+ + +
Sbjct: 540 LKDAKDLKMKMVSDGL 555
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 11/276 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI + + E EM G+ P +VTYN +++G+ + + +
Sbjct: 317 YNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLK----------SEQVE 366
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A+ F EMR G+ PD+ +++ +L+ Y +A + +L L ++ G+ PTV TY +++
Sbjct: 367 AAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLI 426
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G +E+A L EMV G P TY ++ A + + +M L
Sbjct: 427 DGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGL- 485
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+ YN I + L ++ + + D +Y ++I GLC+ K+A
Sbjct: 486 QPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKD 545
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++M+ GL P +T+ L + +L R+L
Sbjct: 546 LKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKL 581
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 10/163 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT LI+ C+ + A + L M+ G++P+VVTY +L++ CRR +L+
Sbjct: 557 PDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLY----- 611
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A F +M GIEP+ ++++++H R + L+ + M E+G+ P T
Sbjct: 612 -----SAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYT 666
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
YT ++ C G DA L EM +NG+ P T+N FK +
Sbjct: 667 YTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 709
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 14/259 (5%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
GV P+V N +L V R A+ R++ + V+ EM IEP + +++ +L
Sbjct: 203 GVAPDVRDCNCVLR-VLRDAA-----RWD----DVRAVYREMLQLEIEPTIVTYNTLLDS 252
Query: 94 YSR-AHKPQLSLDKLNFMKEKGICP-TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ + K + S+ + G C TY V+ L G +E+A +L+ M R
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKK 311
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
S+ TYN R L +M+ + + +P + TYN +I + +++ +
Sbjct: 312 ASSFTYNPLITALLERGFVQKVEALQMEMENEGI-MPTLVTYNAIIHGLLKSEQVEAAQL 370
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ ++ L DL +Y +++G C+ KEA ++ GL P +T+ TL G
Sbjct: 371 KFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 430
Query: 272 QSDMLRTWRRLKKKLDEES 290
+ L RRLK+++ E+
Sbjct: 431 RLGGLEEARRLKEEMVEQG 449
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 145/299 (48%), Gaps = 11/299 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I G+CKI+ + A L + + +G P+ VTY L+NG+C
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCA--------- 337
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A ++F+E + +GI+PD+ ++ ++ +L +N M E+G P +
Sbjct: 338 -EGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQ 396
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY V+ LC G I DA ++ + + G P T+N Y R + A++L +M
Sbjct: 397 TYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 456
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + P+ TYN ++ +++ V E + + + +Y +LI C K
Sbjct: 457 WEYGI-APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK 515
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+EA + V+M ++GL P V+F TL G ++ L L +KL+E+ + ++ N
Sbjct: 516 MEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFN 574
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 46/297 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +Y SL+ G C I A + + EM E G P++ TYN+++NG+C+ +
Sbjct: 358 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN------- 410
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I +A V ++ ++G PDV +F+ ++ Y + K +L + M E GI P T
Sbjct: 411 ---ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 467
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRK------------ 168
Y SV+ LC G++ + E EM+ G P+ TYN + + R K
Sbjct: 468 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 527
Query: 169 ----------------------DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
D GA L+++++E T+N LIG F M
Sbjct: 528 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSA-TADTFNTLIGAFSGKLNM 586
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
M +I++ + D +Y +LI G C+ A + VEMI+KG +P TF
Sbjct: 587 HMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 643
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 136/299 (45%), Gaps = 17/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + +++ CK + A LG++I+RG+ N+ TYN+ + G+C L
Sbjct: 184 PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRL------ 237
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ D MR + PDV +++ ++ + PQ ++ L M +G P T
Sbjct: 238 ----PEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +++A ELL + V G P TY D A++L+ + +
Sbjct: 293 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 352
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I YN L+ + ++ N + D+ +Y ++I+GLC+
Sbjct: 353 AKGI-KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFGS 295
+A + I KG LP TF TL G + L + +L +++ E ++IT+ S
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 470
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 137/299 (45%), Gaps = 27/299 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +LI G CK + A +L M+ +G P+ TYN +++G C+ +
Sbjct: 252 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKIS------- 304
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A ++ + +G PD ++ +++ + +L+ N + KGI P +
Sbjct: 305 ---MVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIV 361
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK---EYRGRKDA-----NG 172
Y S+VK LC G I A +++ EM G P +TYN + DA +
Sbjct: 362 VYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDA 421
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
MK Y +P++ T+N LI + ++D ++ + + D +Y ++
Sbjct: 422 IMKGY---------LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 472
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+GLC+ K E + F EMI KG P +T+ L +S+ + ++ K+ +E +
Sbjct: 473 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 22/272 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P Y +++ D A + M+ GV P++ T+ + L C A H R
Sbjct: 83 PAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRL 142
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + + RG V ++V +Y+ H + + M + P +A
Sbjct: 143 LRALPH----------RGA---VAYCTVVCGLYAHGHTHD-ARQLFDQMLHTHVFPNLAA 188
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ V+ LC G + +A LLG++++ G+S + TYN + + A++L M+
Sbjct: 189 FNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR 248
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK---GSELGLDLDSYTMLIHGLCEK 238
VP++ TYN LI L + M +E ++++ D +Y +I G C+
Sbjct: 249 A--YAVPDVVTYNTLI---RGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKI 303
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+EA + + + KG +P +VT+ +L GL
Sbjct: 304 SMVQEATELLKDAVFKGFVPDQVTYCSLINGL 335
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 25/176 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN--- 58
PN Y LI +C+ N+++ A + + +M + G+ P+ V++N L+ G CR L
Sbjct: 498 PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLL 557
Query: 59 -ERFEK---------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
++ E+ + AEK+FDEM +G D ++ +++ +
Sbjct: 558 FQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCK 617
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+ L M +KG P+++T+ V+ L R+ A ++ MV+ GV P
Sbjct: 618 TANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 673
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/192 (18%), Positives = 84/192 (43%), Gaps = 5/192 (2%)
Query: 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+ Y+RA + + ++D M P Y +++ L + A ++ M+ GV
Sbjct: 57 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 116
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
SP T+ + + + A++L R + + ++ G++ + D R
Sbjct: 117 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTHD-AR 171
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++++ + + + +L ++ ++H LC++ EA ++I++G+ T+ RGL
Sbjct: 172 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 231
Query: 271 IQSDMLRTWRRL 282
++ L RL
Sbjct: 232 CEAGRLPEAVRL 243
>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 142/276 (51%), Gaps = 20/276 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ + L+ CK +I A+ + MIE+GVEPN VTY+ L+NG L N
Sbjct: 7 MPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGY-----LLQNRV 61
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
FE A KVF+ M RG PDV S++I+++ +A + + + M +G+ P A
Sbjct: 62 FE-----ARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTA 116
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ G + +L +M G SP TY+ F + + A++L+R+M
Sbjct: 117 TYNTLLG-----GFWKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREM 171
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIW--NHVKGSELGLDLDSYTMLIHGLCEK 238
+ + L P++ YNILI +++ RE++ HVKG L D+ S+T +I GLC +
Sbjct: 172 QNNYL-NPDLVIYNILIDAMCKSGKLEDARELFLKLHVKG--LLPDVRSWTSIISGLCRE 228
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA + F +M G P ++ + RG +Q++
Sbjct: 229 GLLDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQNN 264
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 130/254 (51%), Gaps = 20/254 (7%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
+ P+ VT+N+L++ +C++ I A+ + M +G+EP+ ++S +++ Y
Sbjct: 6 IMPDAVTFNILVDTLCKKGK----------ISEAQGIVKTMIEKGVEPNTVTYSSLMNGY 55
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
++ + N M +G P V +Y ++ C RI++A+++ EM G+ P+
Sbjct: 56 LLQNRVFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNT 115
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TYN + +K ++L++ M C P++ TY+I + +D E++
Sbjct: 116 ATYNTLLGGFWKQK-----IQLFKDMHAQG-CSPDLVTYSIFLHGLSKQGYLDQALELFR 169
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
++ + L DL Y +LI +C+ K ++A + F+++ KGLLP ++ ++ GL +
Sbjct: 170 EMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREG 229
Query: 275 ML----RTWRRLKK 284
+L + +R++++
Sbjct: 230 LLDEAYKAFRQMER 243
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 18/229 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y LI G CK RID A++ EM RG+ PN TYN LL G ++
Sbjct: 77 IPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWKQKI------ 130
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++F +M +G PD+ ++SI LH S+ +L+ M+ + P +
Sbjct: 131 ---------QLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLV 181
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ +C G++EDA EL ++ G+ P ++ + A K +RQM
Sbjct: 182 IYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQM 241
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
E D C P+ +YN+++ F+ N +++ + + G D+ T
Sbjct: 242 -ERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEM--FDRGFSADALT 287
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 125/234 (53%), Gaps = 11/234 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y ++ GWC I R A L EM+ERG+ PN+ TYN +L G R IR
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ----------IR 247
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + F EM+ R E DV +++ V+H + A + + + + + M +G+ P+VATY +++
Sbjct: 248 HAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMI 307
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ LC +E+A + EMVR G P+ TYN + + + +L ++M E++ C
Sbjct: 308 QVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM-ENEGC 366
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
PN TYN++I + + ++ ++ + + +LD+Y +LI G+ +++
Sbjct: 367 EPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKR 420
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 12/209 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +++ G+ + +I A F EM +R E +VVTY +++G
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFG----------V 277
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I+ A VFDEM G+ P V +++ ++ V + + ++ M +G P V T
Sbjct: 278 AGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTT 337
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ L G EEL+ M G P+ +TYN + Y + A+ L+ +M
Sbjct: 338 YNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMG 397
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMV 209
D C+PN+ TYNILI GMF+ DMV
Sbjct: 398 SGD-CLPNLDTYNILISGMFVRKRSEDMV 425
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 124/270 (45%), Gaps = 14/270 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++ + +++ CK R++ A + R + VTYNV+LNG C
Sbjct: 160 DLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWC----------LI 208
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K A +V EM RGI P++T+++ +L + RA + + + + MK++ V TY
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+VV G I+ A + EM+R GV PS TYN + + + A+ ++ +M
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 183 DDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
PN+ TYN+LI G+F A E+ ++ + +Y M+I E +
Sbjct: 329 RGY-EPNVTTYNVLIRGLFHA-GEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEV 386
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
++A F +M LP T+ L G+
Sbjct: 387 EKALGLFEKMGSGDCLPNLDTYNILISGMF 416
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 11/226 (4%)
Query: 49 VCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
+ R LHP + MR I P +F+IV Y+ A KP ++
Sbjct: 100 IAARLHLHPT---------VWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFL 150
Query: 109 FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168
M E G +A++ +++ LC R+E A EL +R S TYN + K
Sbjct: 151 NMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIK 209
Query: 169 DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
A+++ ++M E + PN+ TYN ++ F ++ E + +K + +D+ +Y
Sbjct: 210 RTPKALEVLKEMVERGIN-PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
T ++HG + K A F EMI +G+LP T+ + + L + D
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKD 314
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 106/234 (45%), Gaps = 4/234 (1%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A K+F M G D+ SF+ +L V ++ + + + + ++ + TV TY ++
Sbjct: 145 AVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILN 203
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
C R A E+L EMV G++P+ TYN K + A + + +MK+ D C
Sbjct: 204 GWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD-CE 262
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
++ TY ++ F + R +++ + + + +Y +I LC+K + A
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
F EM+ +G P T+ L RGL + L ++++ E FQ Y+
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE--PNFQTYN 374
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y ++I CK + ++ A EM+ RG EPNV TYNVL+ G+ H E
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL-----FHAGE- 350
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E++ M G EP+ ++++++ YS + + +L M P +
Sbjct: 351 ----FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLD 406
Query: 121 TYTSVVKCLCSCGRIED 137
TY ++ + R ED
Sbjct: 407 TYNILISGMFVRKRSED 423
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 135/269 (50%), Gaps = 11/269 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV +++LI + K ++ A+ EM+ RG+ P+ +TY+ L++G C+
Sbjct: 311 IPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCK--------- 361
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A ++ D M +G EP++ ++SI+++ Y +A + + + KG+
Sbjct: 362 -ENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTV 420
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V+ C G++ A+EL EMV GV PS TY + A++++ +M
Sbjct: 421 TYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKM 480
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + + I YNI+I +++D ++ + + D+ +Y ++I GLC+K
Sbjct: 481 QKSRM-ILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGS 539
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA F +M E G P T+ L R
Sbjct: 540 LSEADMLFRKMKEDGCAPSDCTYNILIRA 568
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 139/289 (48%), Gaps = 11/289 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V Y+S+I G C R D + L EMI R + PNVVT++ L++ +
Sbjct: 277 ADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVK---------- 326
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A+++++EM RGI PD ++S ++ + + ++ + L+ M KG P + T
Sbjct: 327 EGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVT 386
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ C R+++ L E+ G+ TYN + + N A +L+++M
Sbjct: 387 YSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMV 446
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P++ TY IL+ + EI+ ++ S + L + Y ++IHG+C K
Sbjct: 447 SRGV-PPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKV 505
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+A F + KG+ P +T+ + GL + L L +K+ E+
Sbjct: 506 DDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDG 554
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 146/306 (47%), Gaps = 20/306 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +++LI G+C R+ A + M+E PNVVT N L+NG+C +
Sbjct: 137 PNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGR------- 189
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + D M G E + ++ VL+ ++ L+LD M+E+ I +V
Sbjct: 190 ---VTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQ 246
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYRQ 179
Y+ V+ LC G ++DA L EM G+ Y+ GR D +GA K+ R+
Sbjct: 247 YSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWD-DGA-KMLRE 304
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M ++ +PN+ T++ LI +F+ ++ +E++N + + D +Y+ LI G C++
Sbjct: 305 MIGRNI-IPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKEN 363
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFG 294
+ EA Q M+ KG P VT+ L ++ + RL K L +++T+
Sbjct: 364 RLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYN 423
Query: 295 SEFQNY 300
+ Q +
Sbjct: 424 TLVQGF 429
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 137/305 (44%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ ++ L + D+ F EM G+E N+ T N+++N CR+ L
Sbjct: 66 LPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLL---- 121
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F ++ F G EP+ +FS +++ + + ++ ++ M E P V
Sbjct: 122 FAFSVVGRALKF------GFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVV 175
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +++ LC GR+ +A L+ MV+ G + TY + A+ L+R+M
Sbjct: 176 TVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKM 235
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+E + ++ Y+I+I +D ++N ++ + D+ +Y+ +I GLC +
Sbjct: 236 EERSI-KASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGR 294
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
W + + EMI + ++P VTF L ++ L + L + + ++IT+ S
Sbjct: 295 WDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSS 354
Query: 296 EFQNY 300
+
Sbjct: 355 LIDGF 359
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +L+ G+C+ ++++A+ EM+ RGV P+VVTY +LL+G+C L
Sbjct: 422 YNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQK--------- 472
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++F++M+ + + ++I++H A K + + KG+ P V TY ++
Sbjct: 473 -ALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMI 531
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
LC G + +A+ L +M +G +PS TYN + + G +++L +MK
Sbjct: 532 GGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMK 586
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 63/130 (48%), Gaps = 25/130 (19%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
+ +Y +I+G C +++D A + +GV+P+V+TYNV++ G+C++ SL + +
Sbjct: 489 IGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFR 548
Query: 64 TIR-------------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
++ ++ ++ +EM++RG D ++ +V+ + S
Sbjct: 549 KMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLSDGR 608
Query: 99 KPQLSLDKLN 108
+ LD L+
Sbjct: 609 LDKTFLDMLS 618
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 136/285 (47%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +++ G C R D E + EM+ G PNV T+N L+ +CR N F
Sbjct: 211 PDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCR------NGLF 264
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + +M G PD+ ++ ++ + +++ D L+ M G+ P V
Sbjct: 265 EQV----HEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVC 320
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V+K LCS R E+AE+LL EM + T+N + + ++L QM
Sbjct: 321 YNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 380
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C+P++ TY +I F +D + ++ + SYT+++ GLC ++W
Sbjct: 381 EHG-CIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERW 439
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A + MI++G LP VTF TL + + ++ L K++
Sbjct: 440 VDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQM 484
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 130/280 (46%), Gaps = 11/280 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ L+ +C+ +D L +M+E G P+V+TY ++NG C+ E +
Sbjct: 356 FNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCK----------EGLVD 405
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + M G +P+ S++IVL RA + + + ++ M ++G P T+ +++
Sbjct: 406 EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLI 465
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+C G +E A ELL +M+ NG SP +Y+ A++L M +
Sbjct: 466 NFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI- 524
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN Y+ + R D + ++++ ++ + + D Y +I LC++ + A
Sbjct: 525 TPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAID 584
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+F M+ G +P + T+ L RGL ++R + L +L
Sbjct: 585 FFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 26/222 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------- 51
+P+V YT++I G+CK +D A L M G +PN ++Y ++L G+CR
Sbjct: 385 IPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQE 444
Query: 52 ------RASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ PN T+ N A ++ +M V G PD+ S+S V+
Sbjct: 445 LISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 504
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A K + +L+ LN M KGI P Y+S+ L GR + ++ + V A
Sbjct: 505 KAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAA 564
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
YN R + + A+ + M + C+PN TY ILI
Sbjct: 565 LYNAVISSLCKRWETDRAIDFFAYMVSNG-CMPNESTYTILI 605
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 121/297 (40%), Gaps = 24/297 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ C I A L EM RG +V+L CR
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGF------ 159
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R+A + + +G D + ++V+ ++ L + G P + +
Sbjct: 160 ----RSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVS 215
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V+K LC R +D EEL+ EMVR G P+ T+N Y R NG L+ Q+
Sbjct: 216 YNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIA-YLCR---NG---LFEQVH 268
Query: 182 E------DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
E + C P++ Y +I ++ +I + + L ++ Y ++ GL
Sbjct: 269 EALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGL 328
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKKKLDEESI 291
C ++W+EA EM ++ VTF L Q+ ++ R L++ L+ I
Sbjct: 329 CSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCI 385
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 3/177 (1%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMK 175
P TY +V+ LC+ G I DA +L EM G + + + + RG +
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
L Q+ C + N+++ +D E+ + D+ SY ++ GL
Sbjct: 166 L--QVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
C ++W + + VEM+ G P TF TL L ++ + ++ E T
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCT 280
>gi|255547888|ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546052|gb|EEF47555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 466
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 130/264 (49%), Gaps = 13/264 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + I+GWCK+NR++ A + EM G P V++Y+ ++ C R++ F
Sbjct: 186 PNANTFNIFIHGWCKVNRVEEAYWTIQEMKGHGCTPCVISYSTIVQFYCHRSN------F 239
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K ++ DEM +G+ P+V +++ V+ +++ + + +L MK G P
Sbjct: 240 SKVY----ELLDEMEAQGLIPNVVTYTSVMSALAKSEEYEEALQIAQRMKSVGCKPDTLF 295
Query: 122 YTSVVKCLCSCGRIEDAEELLG-EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y S++ L GR E+A ++ EM GV P+ TYN A+ L +++
Sbjct: 296 YNSLIHTLGKAGRPEEAIQVFEVEMPNTGVPPNTSTYNSMIAMLCHHSQERKALNLLKEI 355
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMD--MVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ +C P++ TY L+ +D + + + + VK L LD +YT+L+HGLC
Sbjct: 356 EASIICKPDVQTYYPLLKSCFKAGSIDSLLSQLLDDMVKKHHLSLDFSAYTLLVHGLCRA 415
Query: 239 QKWKEACQYFVEMIEKGLLPQKVT 262
K + A F EMI K + P+ T
Sbjct: 416 NKCEWAYCLFEEMIGKDMTPKYQT 439
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 15/296 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +++ K+ ++D E FL E +E+G VT + + R A E
Sbjct: 88 YDTMVDIMGKMKQMDQME-FLLEEMEKGQH---VTLKTVGKAMRRFAGARQWE------- 136
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
N +VFD++ G+E + S +++L + K +L+ + +K I P T+ +
Sbjct: 137 NVLRVFDKLGTFGLEKNTESMNLLLDTLCKERKVELAREIFLDLKSH-ISPNANTFNIFI 195
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C R+E+A + EM +G +P +Y+ + Y R + + +L +M+ L
Sbjct: 196 HGWCKVNRVEEAYWTIQEMKGHGCTPCVISYSTIVQFYCHRSNFSKVYELLDEMEAQGL- 254
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+PN+ TY ++ + +I +K D Y LIH L + + +EA Q
Sbjct: 255 IPNVVTYTSVMSALAKSEEYEEALQIAQRMKSVGCKPDTLFYNSLIHTLGKAGRPEEAIQ 314
Query: 247 YF-VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
F VEM G+ P T+ ++ L R L K++ E SI + Q Y+
Sbjct: 315 VFEVEMPNTGVPPNTSTYNSMIAMLCHHSQERKALNLLKEI-EASIICKPDVQTYY 369
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV YTS++ K + A + M G +P+ + YN L++ + + P E
Sbjct: 255 IPNVVTYTSVMSALAKSEEYEEALQIAQRMKSVGCKPDTLFYNSLIHTLGKAG--RPEE- 311
Query: 61 FEKTIRNAEKVFD-EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PT 118
A +VF+ EM G+ P+ ++++ ++ + + + +L+ L ++ IC P
Sbjct: 312 -------AIQVFEVEMPNTGVPPNTSTYNSMIAMLCHHSQERKALNLLKEIEASIICKPD 364
Query: 119 VATYTSVVKCLCSCGRIED-AEELLGEMVR 147
V TY ++K G I+ +LL +MV+
Sbjct: 365 VQTYYPLLKSCFKAGSIDSLLSQLLDDMVK 394
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI G C+ A R EMIE+ + P VV Y +L+ G+C
Sbjct: 191 PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG---------- 240
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I AE +F MR G+ P++ +++ ++ Y + + +L+ M G+ P V T
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC + A + L +M GV P+ YNC Y + + A+ L+ +++
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ +P++ TY+ILI ++RM+ + +K + +Y LI G C++
Sbjct: 361 KHEI-LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
++A + +M EKG+ P +TF TL G
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDG 447
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 136/270 (50%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y +++ G+CKI + A EM+ G+ PNVVT+ +L++G+C+ +
Sbjct: 260 LPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM----- 314
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A K +M G+ P++ ++ ++ Y +A +L + +++ I P V
Sbjct: 315 -----VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVF 369
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+ ++K LC R+E+A+ LL EM + G P+A TYN Y + A+++ QM
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + PNI T++ LI + +M+ ++ + L D+ +YT LI G +
Sbjct: 430 TEKGI-EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
KEA + EM E GL P T L GL
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V +YT LI G C +RI AE M G+ PN+ TYN +++G C+ A
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH------- 278
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A +++ EM G+ P+V +F I++ + + + L M G+ P +
Sbjct: 279 ---VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C G + +A L E+ ++ + P TY+ K G A L ++MK
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PN TYN LI + M+ E+ + + + ++ +++ LI G C+ K
Sbjct: 396 KKGF-LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ A + EM+ KGLLP V + L G + + RL K++ E +
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P ++ ++ G K R D + G+M+ RG PNVVTY L++G CR+
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGD------ 208
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F K R +FDEM + I P V ++I++ + + M+ G+ P +
Sbjct: 209 FLKAFR----LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLY 264
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ C ++ A EL EM+ +G+ P+ T+ + A K M
Sbjct: 265 TYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ VPNI YN LI + + + + ++ E+ D+ +Y++LI GLC +
Sbjct: 325 ASFGV-VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES-----ITFGS 295
+EA EM +KG LP VT+ TL G + + + ++ E+ ITF +
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 296 EFQNY 300
Y
Sbjct: 444 LIDGY 448
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 140/298 (46%), Gaps = 22/298 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+ LI G C ++R++ A+ L EM ++G PN VTYN L++G C+ ++
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM----- 419
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK I +V +M +GIEP++ +FS ++ Y +A K + ++ M KG+ P V
Sbjct: 420 -EKAI----EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVV 474
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT+++ G ++A L EM G+ P+ T +C + A+KL+
Sbjct: 475 AYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAK 534
Query: 181 KEDD------------LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
D LC PN Y LI R+ + ++ ++ S L D+ +
Sbjct: 535 TGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTC 594
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
++I G ++ ++++ G++P + L +G +S L++ R + L
Sbjct: 595 IVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDL 652
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
+ P + V+ L GR + ++ G+MV G SP+ TY + D A
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
+L+ +M E + P + Y ILI +R+ ++ ++ S + +L +Y ++ G
Sbjct: 214 RLFDEMIEKKI-FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDG 272
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
C+ K+A + + EM+ GLLP VTF L GL ++D + + R+
Sbjct: 273 YCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKF 320
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 145/299 (48%), Gaps = 11/299 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I G+CKI+ + A L + + +G P+ VTY L+NG+C
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCA--------- 338
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A ++F+E + +GI+PD+ ++ ++ +L +N M E+G P +
Sbjct: 339 -EGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQ 397
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY V+ LC G I DA ++ + + G P T+N Y R + A++L +M
Sbjct: 398 TYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 457
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + P+ TYN ++ +++ V E + + + +Y +LI C K
Sbjct: 458 WEYGI-APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK 516
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+EA + V+M ++GL P V+F TL G ++ L L +KL+E+ + ++ N
Sbjct: 517 MEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFN 575
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 46/297 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +Y SL+ G C I A + + EM E G P++ TYN+++NG+C+ +
Sbjct: 359 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN------- 411
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I +A V ++ ++G PDV +F+ ++ Y + K +L + M E GI P T
Sbjct: 412 ---ISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 468
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRK------------ 168
Y SV+ LC G++ + E EM+ G P+ TYN + + R K
Sbjct: 469 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 528
Query: 169 ----------------------DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
D GA L+++++E T+N LIG F M
Sbjct: 529 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSA-TADTFNTLIGAFSGKLNM 587
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
M +I++ + D +Y +LI G C+ A + VEMI+KG +P TF
Sbjct: 588 HMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 644
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 136/299 (45%), Gaps = 17/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + +++ CK + A LG++I+RG+ N+ TYN+ + G+C L
Sbjct: 185 PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRL------ 238
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ D MR + PDV +++ ++ + PQ ++ L M +G P T
Sbjct: 239 ----PEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 293
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +++A ELL + V G P TY D A++L+ + +
Sbjct: 294 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 353
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I YN L+ + ++ N + D+ +Y ++I+GLC+
Sbjct: 354 AKGI-KPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFGS 295
+A + I KG LP TF TL G + L + +L +++ E ++IT+ S
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNS 471
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 137/299 (45%), Gaps = 27/299 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +LI G CK + A +L M+ +G P+ TYN +++G C+ +
Sbjct: 253 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKIS------- 305
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A ++ + +G PD ++ +++ + +L+ N + KGI P +
Sbjct: 306 ---MVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIV 362
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK---EYRGRKDA-----NG 172
Y S+VK LC G I A +++ EM G P +TYN + DA +
Sbjct: 363 VYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDA 422
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
MK Y +P++ T+N LI + ++D ++ + + D +Y ++
Sbjct: 423 IMKGY---------LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 473
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+GLC+ K E + F EMI KG P +T+ L +S+ + ++ K+ +E +
Sbjct: 474 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 22/272 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P Y +++ D A + M+ GV P++ T+ + L C A H R
Sbjct: 84 PAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRL 143
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + + RG V ++V +Y+ H + + M + P +A
Sbjct: 144 LRALPH----------RGA---VAYCTVVCGLYAHGHTHD-ARQLFDQMLHTHVFPNLAA 189
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ V+ LC G + +A LLG++++ G+S + TYN + + A++L M+
Sbjct: 190 FNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR 249
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK---GSELGLDLDSYTMLIHGLCEK 238
VP++ TYN LI L + M +E ++++ D +Y +I G C+
Sbjct: 250 A--YAVPDVVTYNTLI---RGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKI 304
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+EA + + + KG +P +VT+ +L GL
Sbjct: 305 SMVQEATELLKDAVFKGFVPDQVTYCSLINGL 336
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 25/176 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN--- 58
PN Y LI +C+ N+++ A + + +M + G+ P+ V++N L+ G CR L
Sbjct: 499 PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLL 558
Query: 59 -ERFEK---------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
++ E+ + AEK+FDEM +G D ++ +++ +
Sbjct: 559 FQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCK 618
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+ L M +KG P+++T+ V+ L R+ A ++ MV+ GV P
Sbjct: 619 TANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/192 (18%), Positives = 84/192 (43%), Gaps = 5/192 (2%)
Query: 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+ Y+RA + + ++D M P Y +++ L + A ++ M+ GV
Sbjct: 58 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 117
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
SP T+ + + + A++L R + + ++ G++ + D R
Sbjct: 118 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTHD-AR 172
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++++ + + + +L ++ ++H LC++ EA ++I++G+ T+ RGL
Sbjct: 173 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 232
Query: 271 IQSDMLRTWRRL 282
++ L RL
Sbjct: 233 CEAGRLPEAVRL 244
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 147/296 (49%), Gaps = 16/296 (5%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI G+CK+ R++ A ++ + I G EP+ VTYN ++ +C+ + +A
Sbjct: 271 LINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGH----------VSHAL 320
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
KV D M G +PDV +++ V++ S+ + + +N M ++G P T+ +++ L
Sbjct: 321 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 380
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
CS R+E+A +L E+ G+SP T+N D + ++L+ +MK C P+
Sbjct: 381 CSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG-CAPD 439
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
TYNILI ++ ++ ++ ++ + +Y +I LC++ + +EA + F
Sbjct: 440 EVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFD 499
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNY 300
+M G+ VTF TL GL ++ + L K+ L +IT+ S +Y
Sbjct: 500 QMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHY 555
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 142/289 (49%), Gaps = 13/289 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + +LI C NR++ A E+ +G+ P+V T+N+L+N +C+ H R
Sbjct: 367 LPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 426
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP-TV 119
+F+EM+ G PD +++I++ K +LD L M+ G CP +
Sbjct: 427 ----------LFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG-CPRST 475
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY +++ LC RIE+AEE+ +M +G+S SA T+N K + A +L Q
Sbjct: 476 VTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQ 535
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M ++ L NI TYN ++ + + +I + + +D+ +Y LI+GLC+
Sbjct: 536 MVKEGLQPSNI-TYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAG 594
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ + A + M KG+ P + + + L + + LR L +++ E
Sbjct: 595 RTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTE 643
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 11/268 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ +Y L+ + +R+ + E EM +RG++P+VVT N L+ +CR
Sbjct: 159 DTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCR----------A 208
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+R A + +EM + PD T+F+ ++ + + +L M E G PT T
Sbjct: 209 HQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTV 268
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ C GR+EDA + + + +G P TYN F + A+K+ M +
Sbjct: 269 NVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQ 328
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ P++ TYN +I +D + I N + D ++ LI LC + + +
Sbjct: 329 EG-HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLE 387
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA E+ KGL P TF L L
Sbjct: 388 EALDLARELTVKGLSPDVYTFNILINAL 415
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ +LI G CK RID A + +M++ G++P+ +TYN +L C++ L +
Sbjct: 513 FNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDL----------K 562
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + + M G E DV ++ +++ +A + Q++L L M+ KGI PT Y V+
Sbjct: 563 KAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVI 622
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
+ L + DA L EM G P A TY F+
Sbjct: 623 QSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFR 658
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 18/282 (6%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRN 67
S + + ++ R D A + + GV+ + YN LLN + + + +
Sbjct: 129 SFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRM----------KL 178
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
E V++EM RGI+PDV + + ++ RAH+ + ++ L M + P T+T++++
Sbjct: 179 LESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQ 238
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGR-KDANGAMKLYRQMKEDD 184
G IE A + +M+ G SP+ T N Y GR +DA G Y Q + D
Sbjct: 239 GFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALG----YIQKEIAD 294
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
P+ TYN + + ++ + + D+ +Y +I+ L + + EA
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+M+++G LP TF TL L + L L ++L
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAREL 396
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 1/190 (0%)
Query: 100 PQLSLDKLN-FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
P+ +L LN + + P+ A Y +++ L + G + E L+ EM R G A
Sbjct: 69 PEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVR 128
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
F + Y + + A+ L R + YN L+ + +RM ++ ++N +
Sbjct: 129 SFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTD 188
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
+ D+ + LI LC + + A EM + P + TF TL +G I+ +
Sbjct: 189 RGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEA 248
Query: 279 WRRLKKKLDE 288
R+K K+ E
Sbjct: 249 ALRVKTKMME 258
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 12/282 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAER-FLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
PNV +TSLI G CKI + A R FL + +PNV TY V++ G C+
Sbjct: 284 PNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCK--------- 334
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + AE + M +G+ P+ +++ ++ + R + + +N MK +G P +
Sbjct: 335 -EGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIY 393
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ C G+I+ A ++L G+ P TY E+ + A+ L+ QM
Sbjct: 394 TYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQM 453
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E+ C P+I TY +I M+ +M+ +++++ L +YT +I G C K
Sbjct: 454 AENS-CHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGK 512
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
A + F M++ G LP +T+ L GL + L R L
Sbjct: 513 STSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARAL 554
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT +I G+CK ++ AE LG M+E+G+ PN TY L++G CR S + F
Sbjct: 320 PNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSF--DRAF 377
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + ++M++ G P++ +++ ++ + + K Q + L +G+CP T
Sbjct: 378 E--------LMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVT 429
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ C G I A +L +M N P +TY Y ++ + +L+ +
Sbjct: 430 YTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCL 489
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L VP TY +I + + + +++ + D +Y LI GLC++ +
Sbjct: 490 SIGL-VPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRL 548
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+EA F M++K ++P VT TL
Sbjct: 549 EEARALFETMLDKHMVPCDVTCVTL 573
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 12/260 (4%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRN 67
T ++ +C+ R G M+E G PNVV Y ++G+C+R ++
Sbjct: 220 TVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGY----------VKQ 269
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK-LNFMKEKGICPTVATYTSVV 126
A V +EM +G++P+V + + ++ + + + L +K P V TYT ++
Sbjct: 270 AFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMI 329
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G++ AE LLG MV G++P+ TY + + A +L +MK +
Sbjct: 330 GGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGF- 388
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+PNI+TYN +IG F ++ ++ L D +YTMLI C++ A
Sbjct: 389 LPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALD 448
Query: 247 YFVEMIEKGLLPQKVTFETL 266
F +M E P T+ T+
Sbjct: 449 LFNQMAENSCHPDIDTYTTI 468
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 105/255 (41%), Gaps = 14/255 (5%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75
+ NR+ A L E+ G+ V T N +L R L F +A + FD M
Sbjct: 125 ETNRLREATDMLLELRSHGLPLVVETANWVL-----RVGLRQRHHFA----HARQAFDGM 175
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
G+ PD SF ++ + + + + L M +G AT T VV+ C GR
Sbjct: 176 ---GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRF 232
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
D L G MV G P+ Y + R A + +M L PN++T+
Sbjct: 233 RDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGL-KPNVYTHTS 291
Query: 196 LIGMFMALNRMD-MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
LI + + R VK S ++ +YT++I G C++ K A M+E+
Sbjct: 292 LIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ 351
Query: 255 GLLPQKVTFETLYRG 269
GL P T+ TL G
Sbjct: 352 GLAPNTNTYTTLIDG 366
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 109/271 (40%), Gaps = 29/271 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA------- 53
+PN+ Y ++I G+CK +I A + L +G+ P+ VTY +L+ C++
Sbjct: 389 LPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALD 448
Query: 54 --------SLHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
S HP+ TI ++++FD+ G+ P +++ ++ Y
Sbjct: 449 LFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYC 508
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
R K +L M + G P TY +++ LC R+E+A L M+ + P
Sbjct: 509 RVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDV 568
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
T EY R A+ + + H + L+ A++ +D +
Sbjct: 569 TCVTLAYEYCRRDKTTIAVSFLDGLDKRQ----QAHAADALVRKLSAVDNLDAASLFLKN 624
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
V +D +YT I+ E ++ A +
Sbjct: 625 VLDKHYAVDHATYTSFINSCYESNRYALASE 655
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 142/288 (49%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
++ Y +LI G+C R D + L +MI+R + PNVVT++VL++ +
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK---------- 345
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +R A+++ EM RGI P+ +++ ++ + + ++ + ++ ++ M KG P + T
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C RI+D EL EM GV + TYN + + A KL+++M
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I +Y IL+ ++ EI+ ++ S++ LD+ Y ++IHG+C K
Sbjct: 466 SRRV-RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
+A F + KG+ + + L + D L L +K+ EE
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 143/281 (50%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV ++ LI + K ++ A++ L EM++RG+ PN +TYN L++G C+
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK---------- 380
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A ++ D M +G +PD+ +F+I+++ Y +A++ L+ M +G+ T
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V+ C G++E A++L EMV V P +Y + A++++ +++
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + +I Y I+I +++D +++ + + LD +Y ++I LC K
Sbjct: 501 KSKMEL-DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+A F +M E+G P ++T+ L R + D T L
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAEL 600
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 137/269 (50%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ CK + +A L +M ER ++ + V Y+++++G+C+ SL
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD----- 280
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA +F+EM ++G + D+ +++ ++ + A + L M ++ I P V T
Sbjct: 281 -----NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ ++ G++ +A++LL EM++ G++P+ TYN + A+++ M
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P+I T+NILI + NR+D E++ + + + +Y L+ G C+ K
Sbjct: 396 SKG-CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ A + F EM+ + + P V+++ L GL
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 145/316 (45%), Gaps = 46/316 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ ++ +L+ G C R+ A + M+E G +P ++T N L+NG+C
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC----------L 205
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-------- 113
+ +A + D M G +P+ ++ VL+V ++ + L+++ L M+E+
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 114 ------GIC---------------------PTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
G+C + TY +++ C+ GR +D +LL +M+
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+ +SP+ T++ + A +L ++M + + PN TYN LI F NR+
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI-APNTITYNSLIDGFCKENRL 384
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ + + D+ ++ +LI+G C+ + + + F EM +G++ VT+ TL
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 267 YRGLIQSDMLRTWRRL 282
+G QS L ++L
Sbjct: 445 VQGFCQSGKLEVAKKL 460
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 11/234 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + LI G+CK NRID EM RGV N VTYN L+ G C+ L
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV---- 456
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+K+F EM R + PD+ S+ I+L + + +L+ +++ + +
Sbjct: 457 ------AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ +C+ +++DA +L + GV A YN E + + A L+R+M
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
E+ P+ TYNILI + + E+ +K S D+ + M+I+ L
Sbjct: 571 EEGH-APDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 129/292 (44%), Gaps = 11/292 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V + L K + ++ +M +G+ ++ T ++++N CR
Sbjct: 85 LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRC-------- 136
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A ++ G EPD F+ +L+ + +L+ ++ M E G PT+
Sbjct: 137 --RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI 194
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T ++V LC G++ DA L+ MV G P+ TY AM+L R+M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+E ++ + + Y+I+I +D ++N ++ D+ +Y LI G C +
Sbjct: 255 EERNIKLDAVK-YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
W + + +MI++ + P VTF L ++ LR +L K++ + I
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 61/131 (46%), Gaps = 25/131 (19%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH------ 56
++ +Y +I+G C +++D A + +GV+ + YN++++ +CR+ SL
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 57 ---------PNE-RFEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
P+E + IR A ++ +EM+ G DV++ +V+++ S
Sbjct: 567 RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626
Query: 98 HKPQLSLDKLN 108
+ LD L+
Sbjct: 627 ELDKSFLDMLS 637
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI G C+ A R EMIE+ + P VV Y +L+ G+C
Sbjct: 191 PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG---------- 240
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I AE +F MR G+ P++ +++ ++ Y + + +L+ M G+ P V T
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVT 300
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC + A + L +M GV P+ YNC Y + + A+ L+ +++
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ +P++ TY+ILI ++RM+ + +K + +Y LI G C++
Sbjct: 361 KHEI-LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
++A + +M EKG+ P +TF TL G
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDG 447
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 136/270 (50%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y +++ G+CKI + A EM+ G+ PNVVT+ +L++G+C+ +
Sbjct: 260 LPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEM----- 314
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A K +M G+ P++ ++ ++ Y +A +L + +++ I P V
Sbjct: 315 -----VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVF 369
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+ ++K LC R+E+A+ LL EM + G P+A TYN Y + A+++ QM
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + PNI T++ LI + +M+ ++ + L D+ +YT LI G +
Sbjct: 430 TEKGI-EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
KEA + EM E GL P T L GL
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V +YT LI G C +RI AE M G+ PN+ TYN +++G C+ A
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH------- 278
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A +++ EM G+ P+V +F I++ + + + L M G+ P +
Sbjct: 279 ---VKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C G + +A L E+ ++ + P TY+ K G A L ++MK
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PN TYN LI + M+ E+ + + + ++ +++ LI G C+ K
Sbjct: 396 KKGF-LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ A + EM+ KGLLP V + L G + + RL K++ E +
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P ++ ++ G K R D + G+M+ RG PNVVTY L++G CR+
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGD------ 208
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F K R +FDEM + I P V ++I++ + + M+ G+ P +
Sbjct: 209 FLKAFR----LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLY 264
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ C ++ A EL EM+ +G+ P+ T+ + A K M
Sbjct: 265 TYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ VPNI YN LI + + + + ++ E+ D+ +Y++LI GLC +
Sbjct: 325 ASFGV-VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES-----ITFGS 295
+EA EM +KG LP VT+ TL G + + + ++ E+ ITF +
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 296 EFQNY 300
Y
Sbjct: 444 LIDGY 448
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 137/290 (47%), Gaps = 22/290 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+ LI G C ++R++ A+ L EM ++G PN VTYN L++G C+ ++
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM----- 419
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK I +V +M +GIEP++ +FS ++ Y +A K + ++ M KG+ P V
Sbjct: 420 -EKAI----EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVV 474
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT+++ G ++A L EM G+ P+ T +C + A+KL+
Sbjct: 475 AYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAK 534
Query: 181 KEDD------------LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
D LC PN Y LI R+ + ++ ++ S L D+ +
Sbjct: 535 TGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTC 594
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
++I G ++ ++++ G++P + L +G +S L++
Sbjct: 595 IVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKS 644
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
+ P + V+ L GR + ++ G+MV G SP+ TY + D A
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
+L+ +M E + P + Y ILI +R+ ++ ++ S + +L +Y ++ G
Sbjct: 214 RLFDEMIEKKI-FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDG 272
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
C+ K+A + + EM+ GLLP VTF L GL ++D + + R+
Sbjct: 273 YCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKF 320
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 145/291 (49%), Gaps = 12/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y ++ G+CK+ ++ A +++ +++E G++P+ TY L+ G C+R
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQR--------- 266
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + +A KVF+EM ++G + +++ ++H A + ++D MK+ PTV T
Sbjct: 267 -KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++K LC R +A L+ EM G+ P+ TY + A +L QM
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L +PN+ TYN LI + ++ ++ ++ +L + +Y LI G C K
Sbjct: 386 EKGL-MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNV 443
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A +M+E+ +LP VT+ +L G +S + RL +++ +
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 140/315 (44%), Gaps = 25/315 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PN+ YT LI C + + A LG+M+E+G+ PNV+TYN L+NG C+R
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 54 -------SLHPNERF---------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
L PN R + + A V ++M R + PDV +++ ++ R+
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ L+ M ++G+ P TYTS++ LC R+E+A +L + + GV+P+ Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
Y + A + +M + C+PN T+N LI A ++ + +
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKN-CLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
L + + T+LIH L + + A F +M+ G P T+ T + + L
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 278 TWRRLKKKLDEESIT 292
+ K+ E ++
Sbjct: 655 DAEDMMAKMRENGVS 669
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 136/284 (47%), Gaps = 30/284 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV MYT+LI G+CK ++D A L +M+ + PN +T+N L++G+C L
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL------ 583
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + ++M G++P V++ +I++H + + + M G P T
Sbjct: 584 ----KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+ ++ C GR+ DAE+++ +M NGVSP TY+ K Y N A + ++M+
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 182 EDDLCVPNIHTYNILIGMFM---------------ALNRM---DMVREIWNHVKGSELGL 223
D C P+ HT+ LI + A++ M D V E+ + +
Sbjct: 700 -DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTP 758
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMI-EKGLLPQKVTFETL 266
+ SY LI G+CE + A + F M +G+ P ++ F L
Sbjct: 759 NAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 34/201 (16%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M E +CP + TY +V C G +E+A + + ++V G+ P TY Y RKD
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 170 ANGAMKLYRQMK----------------------------------EDDLCVPNIHTYNI 195
+ A K++ +M +DD C P + TY +
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
LI R + ++ + + ++ +YT+LI LC + K+++A + +M+EKG
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 256 LLPQKVTFETLYRGLIQSDML 276
L+P +T+ L G + M+
Sbjct: 389 LMPNVITYNALINGYCKRGMI 409
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ Y +++ L G +++ +++ EM+ + V P+ TYN Y + A +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
++ E L P+ TY LI + +D +++N + + +YT LIHGLC
Sbjct: 243 KIVEAGL-DPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++ EA FV+M + P T+ L + L S+ L K+++E I
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMI-ERGVEPNVVTYNVLLNGVCRRASLHPNER 60
PN K Y LI G C++ + +AE+ M G+ P+ + +N LL+ C+
Sbjct: 758 PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL-------- 809
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL-HVYSRAHKPQLSLDKLNFMKEKGICPTV 119
K A KV D+M G P + S +++ +Y + K + + N + + G
Sbjct: 810 --KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL-QCGYYEDE 866
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
+ ++ + G +E EL M +NG S++TY+
Sbjct: 867 LAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYS 905
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 140/291 (48%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + L++ K + +F +MI G+ P+V TYNV+++ +C+ L
Sbjct: 192 LPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLE---- 247
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
N+ ++F +MR G+ PDV +++ ++ Y + + N MK+ G P +
Sbjct: 248 ------NSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 301
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ C C ++ A E EM NG+ P+ TY+ + GA+KL M
Sbjct: 302 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDM 361
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L +PN TY LI + ++ N + + + L++ +YT L+ GLC+ +
Sbjct: 362 RRTGL-LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGR 420
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EA + F M++ G+ P + + L G I+++ + ++ K++ E +I
Sbjct: 421 MIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 471
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 138/293 (47%), Gaps = 11/293 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YTSLI CK + A + L +M++ GV+ N+VTY LL+G+C+ +
Sbjct: 367 LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI---- 422
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
AE+VF M GI P+ ++ ++H Y +A + + ++ L M E I P +
Sbjct: 423 ------EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLI 476
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y S++ CS ++E+ + +L EM G+S + Y ++ A+ +++M
Sbjct: 477 LYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEM 536
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+D I TY +LI +++ + + + L ++ YT LI GLC
Sbjct: 537 -QDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNC 595
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
+ A + F EM +G+ P F L G ++ L+ L ++ E +I F
Sbjct: 596 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF 648
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 141/297 (47%), Gaps = 11/297 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN ++YT+L++G+ K R++ A + L +M E ++P+++ Y ++ G C
Sbjct: 438 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCS---------- 487
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + + + +EM+ RGI + + ++ Y +A K +L+ M++ G+ T+ T
Sbjct: 488 QRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVT 547
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G +E A + M+ G+ P+ Y A KL+ +M+
Sbjct: 548 YCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQ 607
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I + LI + + + + + + DL YT L+ G + +
Sbjct: 608 CRGM-TPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGEL 666
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
+A ++F EMIEKG+LP++V L R + L LK +++ + +F + Q
Sbjct: 667 HQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMAYSFEFDAQ 723
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 2/223 (0%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ A + F MR P S + +LH S++ QL N M GI P+V TY
Sbjct: 176 LEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNV 235
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ LC G +E++ L +M G+SP TYN Y L+ +MK D
Sbjct: 236 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK-DV 294
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
CVP+I TYN LI + +M E ++ +K + L ++ +Y+ LI C++ + A
Sbjct: 295 GCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGA 354
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRLKKKL 286
+ +M GLLP + T+ +L ++ ++ W+ L L
Sbjct: 355 IKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 397
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 138/291 (47%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y SLIYG+ K + +A L +M +G +PNV +Y +L++G C+
Sbjct: 380 VPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGK------ 433
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A + +EM G++P+ F+ ++ + + H+ +++ M KG P V
Sbjct: 434 ----IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 489
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ S++ LC I+ A LL +M+ GV + TYN + R + A KL +M
Sbjct: 490 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 549
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ I TYN LI +D R ++ + L S +LI+GLC
Sbjct: 550 VFQGSLLDEI-TYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGM 608
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+EA ++ EM+ +G P VTF +L GL ++ + + +KL E I
Sbjct: 609 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 659
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 56/342 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---- 56
+P+ + + +I G CK +RI+ A + + M+ RG P+ +TY L+NG+C+ +
Sbjct: 278 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKD 337
Query: 57 -------PNERFEKTI----------RNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAH 98
P T+ +A+ V +M GI PDV +++ +++ Y +
Sbjct: 338 LFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKG 397
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
L+L+ L M+ KG P V +YT +V C G+I++A LL EM +G+ P+ +N
Sbjct: 398 LVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFN 457
Query: 159 CFFKEYRGRKDANGAMKLYRQM-----KED---------DLC------------------ 186
C + A++++R+M K D LC
Sbjct: 458 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 517
Query: 187 --VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
V N TYN LI F+ + R++ N + LD +Y LI GLC + +A
Sbjct: 518 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKA 577
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
F +M+ GL+P ++ L GL +S M+ +K++
Sbjct: 578 RSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEM 619
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 146/308 (47%), Gaps = 16/308 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +Y +LI+ K NR++ A + L EM G P+ T+N ++ G+C +
Sbjct: 243 VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC---------K 293
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F++ I A K+ + M +RG PD ++ +++ + + + D + + PT
Sbjct: 294 FDR-INEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSV 348
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+ +++ + GR++DA+ +L +MV + G+ P TYN Y + A+++ R
Sbjct: 349 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRD 408
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ C PN+++Y IL+ F L ++D + N + L + + LI C++
Sbjct: 409 MRNKG-CKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEH 467
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ EA + F EM KG P TF +L GL + D ++ L + + E + + N
Sbjct: 468 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 527
Query: 300 YHFKPYRR 307
+ R
Sbjct: 528 TLINAFLR 535
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 130/268 (48%), Gaps = 17/268 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT L+ G+CK+ +ID A L EM G++PN V +N L++ C+
Sbjct: 416 PNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCK---------- 465
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A ++F EM +G +PDV +F+ ++ + + +L L M +G+ T
Sbjct: 466 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 525
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ G I++A +L+ EMV G TYN K + + A L+ +M
Sbjct: 526 YNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKML 585
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL---GLDLDSYTMLIHGLCEK 238
D L VP+ + NILI L R MV E K L D+ ++ LI+GLC
Sbjct: 586 RDGL-VPSSISCNILIN---GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 641
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ F ++ +G+ P VT+ TL
Sbjct: 642 GRIEDGLTMFRKLQAEGIPPDTVTYNTL 669
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y SLI G C+ +D A +M+ G+ P+ ++ N+L+NG+CR + F+K
Sbjct: 561 YNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQK--- 617
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
EM +RG PD+ +F+ +++ RA + + L ++ +GI P TY +++
Sbjct: 618 -------EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLM 670
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163
LC G + DA LL E + +G P+ T++ +
Sbjct: 671 SWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQS 707
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 24/239 (10%)
Query: 36 EPNVVTYNVLL----NGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
EP +YNV+L +G C + A VF +M R I P + +F +V+
Sbjct: 173 EPTFKSYNVVLEILVSGNCHKV--------------AANVFYDMLSRKIPPTLFTFGVVM 218
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
++ +L L M + G P Y +++ L C R+ +A +LL EM G
Sbjct: 219 KALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 278
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P AET+N N A K+ +M P+ TY L+ + R+D ++
Sbjct: 279 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF-TPDDITYGYLMNGLCKIGRVDAAKD 337
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK-GLLPQKVTFETLYRG 269
++ + + + LIHG + +A +M+ G++P T+ +L G
Sbjct: 338 LFYRIPKPTSVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 392
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 6/199 (3%)
Query: 74 EMR-VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
EMR V EP S+++VL + + +++ + M + I PT+ T+ V+K LC+
Sbjct: 165 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAV 224
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
++ A +L +M ++G P++ Y N A++L +M CVP+ T
Sbjct: 225 NEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG-CVPDAET 283
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
+N +I +R++ ++ N + D +Y L++GLC+ + A F +
Sbjct: 284 FNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 343
Query: 253 EKGLLPQKVTFETLYRGLI 271
+ P V F TL G +
Sbjct: 344 K----PTSVIFNTLIHGFV 358
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 14/108 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + SLI G C+ RI+ ++ G+ P+ VTYN L++ +C+ ++
Sbjct: 626 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVY----- 680
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF 109
+A + DE G P+ ++SI+L ++ PQ +LD+ F
Sbjct: 681 -----DACLLLDEGIEDGFVPNDRTWSILL----QSLVPQETLDRRTF 719
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 99/269 (36%), Gaps = 52/269 (19%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
++G + Y VL+ L N F KTI +++ +M+ GI + F ++
Sbjct: 98 QKGYRHSFDVYQVLI------GKLGSNGEF-KTI---DRLLMQMKDEGIVFKESLFISIM 147
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGIC-PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
Y +A P + + M+ C PT +Y V++ L S + A + +M+ +
Sbjct: 148 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 207
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
P+ T+ K + + A+ + R M + CVPN Y LI
Sbjct: 208 PPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHG-CVPNSVIYQTLI------------- 253
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
H L + + EA Q EM G +P TF + GL
Sbjct: 254 ----------------------HSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 291
Query: 271 IQSDMLRTW-----RRLKKKLDEESITFG 294
+ D + R L + + IT+G
Sbjct: 292 CKFDRINEAAKMVNRMLIRGFTPDDITYG 320
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/160 (18%), Positives = 67/160 (41%)
Query: 111 KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
+KG + Y ++ L S G + + LL +M G+ + ++Y
Sbjct: 97 SQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFP 156
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
+L +M+ C P +YN+++ + ++ N + ++ + ++ L ++ +
Sbjct: 157 GQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGV 216
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ LC + A +M + G +P V ++TL L
Sbjct: 217 VMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSL 256
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 148/341 (43%), Gaps = 45/341 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G CK+ A R LG M+++ +PNV YN +++ +C+
Sbjct: 131 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCK---------- 180
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A +F EM +GI PD+ +++ ++H + + LN M + I P V +
Sbjct: 181 DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 240
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMV-RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ +VV LC G++ +A +++ +M+ R G P+ +YN Y + + AM L+ +M
Sbjct: 241 FNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM 300
Query: 181 KEDDLC----------------------------------VPNIHTYNILIGMFMALNRM 206
+L +PN+ TY IL+ +
Sbjct: 301 CRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYL 360
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++GS L D+ + I G+C + + A F + KGL P T+ +
Sbjct: 361 AEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIM 420
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPYRR 307
GL + +L +L +++DE T N + + R
Sbjct: 421 INGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 461
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 132/274 (48%), Gaps = 12/274 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SLI+ C + L EM++ + P+VV++N +++ +C+
Sbjct: 201 PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCK---------- 250
Query: 62 EKTIRNAEKVFDEMRVRG-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A V D+M RG P+V S++ +++ Y + + ++ M + + P
Sbjct: 251 EGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTV 310
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY++++ LC R++DA L EMV P+ TY + AM L + +
Sbjct: 311 TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI 370
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +L P+I NI I ++ R++++++ L D+ +Y+++I+GLC +
Sbjct: 371 EGSNL-DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGL 429
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA + F EM E G + T+ RG ++++
Sbjct: 430 LDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 463
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 123/298 (41%), Gaps = 43/298 (14%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
+M G+ PN+ T ++L+N C H N I A +FD+M G PDV ++
Sbjct: 86 QMDSFGIPPNIYTLHILINSFC-----HLN---RGKIGEALHLFDKMIGEGFRPDVVTYG 137
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
+++ + ++ L M +K P V Y +++ LC ++ +A L EMV
Sbjct: 138 TLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK 197
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL----------------------- 185
G+SP TYN + L +M + +
Sbjct: 198 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA 257
Query: 186 ------------CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
C+PN+ +YN LI + + R+D ++ + EL D +Y+ LIH
Sbjct: 258 HDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIH 317
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
GLC ++ ++A F EM+ +P VT+ L L ++ L L K ++ ++
Sbjct: 318 GLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 375
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV Y +LI G+CKI RID A GEM + + P+ VTY+ L++G+C ER
Sbjct: 271 MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV------ER 324
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ I +F EM P++ ++ I+L + ++ L ++ + P +
Sbjct: 325 LQDAI----ALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 380
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ +C G +E A +L + G+ P TY+ R + A KL+R+M
Sbjct: 381 VNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 440
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE--- 237
E+ C N YN + F+ N ++ + D + T+ + L +
Sbjct: 441 DENG-CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL 499
Query: 238 ----KQKWKEACQYFVEMIEKGLLPQKVTF 263
KQ ++ C+ + E ++ Q++
Sbjct: 500 DQSLKQILRDFCKQKSWIYENVMVLQEIIL 529
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 145/300 (48%), Gaps = 16/300 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y SLIYG+ K + +A L +M +G +PNV +Y +L++G C+
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK------ 439
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A V +EM G++P+ F+ ++ + + H+ +++ M KG P V
Sbjct: 440 ----IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ S++ LC I+ A LL +M+ GV + TYN + R + A KL +M
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ I TYN LI +D R ++ + S +LI+GLC
Sbjct: 556 VFQGSPLDEI-TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK-LDEESITFGS 295
+EA ++ EM+ +G P VTF +L GL ++ D L +R+L+ + + +++TF +
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 152/308 (49%), Gaps = 23/308 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE- 59
+P+ + + +I G CK +RI+ A + + M+ RG P+ +TY L+NG+C+ + +
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 60 ---RFEKT-----------------IRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAH 98
R K + +A+ V +M GI PDV +++ +++ Y +
Sbjct: 344 LFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
L+L+ L+ M+ KG P V +YT +V C G+I++A +L EM +G+ P+ +N
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
C + A++++R+M C P+++T+N LI ++ + + +
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKG-CKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
+ + +Y LI+ + + KEA + EM+ +G ++T+ +L +GL ++ +
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 279 WRRLKKKL 286
R L +K+
Sbjct: 583 ARSLFEKM 590
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 144/308 (46%), Gaps = 16/308 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +Y +LI+ K NR++ A + L EM G P+ T+N ++ G+C +
Sbjct: 249 VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC---------K 299
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F++ I A K+ + M +RG PD ++ +++ + + + D + + P +
Sbjct: 300 FDR-INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIV 354
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+ +++ + GR++DA+ +L +MV + G+ P TYN Y A+++
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ C PN+++Y IL+ F L ++D + N + L + + LI C++
Sbjct: 415 MRNKG-CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ EA + F EM KG P TF +L GL + D ++ L + + E + + N
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 300 YHFKPYRR 307
+ R
Sbjct: 534 TLINAFLR 541
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 128/268 (47%), Gaps = 17/268 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT L+ G+CK+ +ID A L EM G++PN V +N L++ C+
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK---------- 471
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A ++F EM +G +PDV +F+ ++ + + +L L M +G+ T
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ G I++A +L+ EMV G TYN K + + A L+ +M
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL---GLDLDSYTMLIHGLCEK 238
D NI + NILI L R MV E K L D+ ++ LI+GLC
Sbjct: 592 RDGHAPSNI-SCNILIN---GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ F ++ +G+ P VTF TL
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y SLI G C+ +D A +M+ G P+ ++ N+L+NG+CR + F+K
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK--- 623
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
EM +RG PD+ +F+ +++ RA + + L ++ +GI P T+ +++
Sbjct: 624 -------EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163
LC G + DA LL E + +G P+ T++ +
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 24/239 (10%)
Query: 36 EPNVVTYNVLL----NGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
EP +YNV+L +G C + A VF +M R I P + +F +V+
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKV--------------AANVFYDMLSRKIPPTLFTFGVVM 224
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ ++ +L L M + G P Y +++ L C R+ +A +LL EM G
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P AET+N N A K+ +M P+ TY L+ + R+D ++
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF-APDDITYGYLMNGLCKIGRVDAAKD 343
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK-GLLPQKVTFETLYRG 269
++ + E+ + + LIHG + +A +M+ G++P T+ +L G
Sbjct: 344 LFYRIPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 17/233 (7%)
Query: 74 EMR-VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
EMR V EP S+++VL + + +++ + M + I PT+ T+ V+K C+
Sbjct: 171 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAV 230
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
I+ A LL +M ++G P++ Y N A++L +M CVP+ T
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG-CVPDAET 289
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
+N +I +R++ ++ N + D +Y L++GLC+ + A F +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 253 EKGLLPQKVTFETLYRGLIQ-----------SDMLRTWRRLKKKLDEESITFG 294
+ P+ V F TL G + SDM+ ++ + S+ +G
Sbjct: 350 K----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 87/235 (37%), Gaps = 42/235 (17%)
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVATYTS 124
+ +++ +M+ GI + F ++ Y +A P + + M+ C PT +Y
Sbjct: 128 KTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNV 187
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
V++ L S + A + +M+ + P+ T+ K + + + A+ L R M +
Sbjct: 188 VLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHG 247
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
CVPN Y LI H L + + EA
Sbjct: 248 -CVPNSVIYQTLI-----------------------------------HSLSKCNRVNEA 271
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW-----RRLKKKLDEESITFG 294
Q EM G +P TF + GL + D + R L + + IT+G
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 14/108 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + SLI G C+ RI+ ++ G+ P+ VT+N L++ +C+ ++
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY----- 686
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF 109
+A + DE G P+ ++SI+L ++ PQ +LD+ F
Sbjct: 687 -----DACLLLDEGIEDGFVPNHRTWSILL----QSIIPQETLDRRRF 725
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/150 (16%), Positives = 62/150 (41%)
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ L + G + + LL +M G+ + ++Y +L +M
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P +YN+++ + ++ N + ++ + ++ L ++ +++ C +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A +M + G +P V ++TL L
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSL 262
>gi|449444202|ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
gi|449502917|ref|XP_004161779.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
Length = 532
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 132/262 (50%), Gaps = 16/262 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++K ++ GWC + + A+RF E+IE EP++ TY L+N + ++ L
Sbjct: 264 DIKTSNIILNGWCVLGNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLG------ 317
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A K+F M RG+ DV + ++ + +L+ M E+G VATY
Sbjct: 318 ----TALKLFRAMWERGLTTDVVICNCIIDALCFKKRIPEALEIFKEMNERGCAANVATY 373
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVS--PSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+++K LC R+E ELL EM S P++ T+ RG ++ L+++M
Sbjct: 374 NTLIKHLCKIRRMEKVNELLNEMEERKGSCWPNSVTFIYLLGSVRGPEEVPV---LFQRM 430
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E C YN+++ ++M + + V+ WN +K LG D SYT++IHGL EK +
Sbjct: 431 -ERSGCKMTSDIYNLILRLYMDWDIQERVKSTWNEMKEMGLGPDRRSYTIMIHGLYEKGR 489
Query: 241 WKEACQYFVEMIEKGLLPQKVT 262
K+ +YF EM KG++P+ T
Sbjct: 490 TKDGLRYFNEMTLKGIMPEPKT 511
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 17/250 (6%)
Query: 26 FLGEMIERGVE-----PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80
F +++RG P V YN +L L RFE+ +KV EM R
Sbjct: 143 FFNWVLKRGTNEEKFTPGSVIYNEIL------VILGKFRRFEE----VDKVLVEMSKRKE 192
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
+ ++S++L+ Y+ AHK + ++ +E G+ + + S++ LC +E AE
Sbjct: 193 LVNEETYSVLLNRYAAAHKVEEAISIFYRRQEFGLEMNLIAFQSLLMWLCRYKHVEAAET 252
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
L V+ +T N + + + A + +R++ E C P+I+TY LI
Sbjct: 253 LFHSKKHEFVT-DIKTSNIILNGWCVLGNVHEAKRFWREIIESK-CEPDIYTYGTLINSL 310
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
++ +++ + L D+ +I LC K++ EA + F EM E+G
Sbjct: 311 TKKGKLGTALKLFRAMWERGLTTDVVICNCIIDALCFKKRIPEALEIFKEMNERGCAANV 370
Query: 261 VTFETLYRGL 270
T+ TL + L
Sbjct: 371 ATYNTLIKHL 380
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 109/264 (41%), Gaps = 14/264 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +Y ++ K R + ++ L EM +R N TY+VLLN R A+ H
Sbjct: 159 PGSVIYNEILVILGKFRRFEEVDKVLVEMSKRKELVNEETYSVLLN---RYAAAH----- 210
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +F + G+E ++ +F +L R +K + + L K+ + T
Sbjct: 211 --KVEEAISIFYRRQEFGLEMNLIAFQSLLMWLCR-YKHVEAAETLFHSKKHEFVTDIKT 267
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ C G + +A+ E++ + P TY + A+KL+R M
Sbjct: 268 SNIILNGWCVLGNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMW 327
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L ++ N +I R+ EI+ + ++ +Y LI LC+ ++
Sbjct: 328 ERGLTT-DVVICNCIIDALCFKKRIPEALEIFKEMNERGCAANVATYNTLIKHLCKIRRM 386
Query: 242 KEACQYFVEMIEK--GLLPQKVTF 263
++ + EM E+ P VTF
Sbjct: 387 EKVNELLNEMEERKGSCWPNSVTF 410
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 134/269 (49%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + ++ C R AER L +M+ +G P+VVT+N+L+N +CR+
Sbjct: 311 PNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRK--------- 361
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A V ++M G P+ S++ +LH + + K +++ L M +G P + T
Sbjct: 362 -RLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT 420
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G+++ A E+L ++ G SP TYN A++L +M+
Sbjct: 421 YNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMR 480
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I TY+ L+ ++D +I++ ++G + +Y ++ GLC+ Q+
Sbjct: 481 RKGL-KPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQT 539
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A + M+EKG P + T+ L G+
Sbjct: 540 SRAIDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 151/327 (46%), Gaps = 38/327 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+P+V Y LI G+CK ID A L M V P+VVTYN +L +C L
Sbjct: 173 VPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAME 229
Query: 56 ----------HPNE-----RFEKT-----IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+P+ E T + A K+ DEMR +G +PDV +++++++
Sbjct: 230 VLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 289
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + ++ LN M G P V T+ +++ +CS GR DAE LL +M+R G SPS
Sbjct: 290 KEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVV 349
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
T+N ++ A+ + +M + CVPN +YN L+ F +MD E
Sbjct: 350 TFNILINFLCRKRLLGRAIDVLEKMPKHG-CVPNSLSYNPLLHGFCQEKKMDRAIEYLEI 408
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ--- 272
+ D+ +Y L+ LC+ K A + ++ KG P +T+ T+ GL +
Sbjct: 409 MVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 468
Query: 273 ----SDMLRTWRRLKKKLDEESITFGS 295
++L RR K L + IT+ +
Sbjct: 469 TEYAVELLEEMRR--KGLKPDIITYST 493
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI G CK R+D A +FL M G +PNV+T+N++L +C
Sbjct: 276 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWM----- 330
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+AE++ +M +G P V +F+I+++ R ++D L M + G P +
Sbjct: 331 -----DAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLS 385
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C +++ A E L MV G P TYN + A+++ Q+
Sbjct: 386 YNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLS 445
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P + TYN +I + + + E+ ++ L D+ +Y+ L+ GL + K
Sbjct: 446 SKG-CSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKV 504
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA + F +M + P VT+ + GL ++
Sbjct: 505 DEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKA 536
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 137/305 (44%), Gaps = 49/305 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V TSLI G+C+ + A R + + G P+V+TYNVL+ G C+
Sbjct: 138 IPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGE------ 191
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A +V + M V PDV +++ +L + K + +++ L+ ++ P V
Sbjct: 192 ----IDKALEVLERMSV---APDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVI 244
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT +++ C+ + A +LL EM + G P TYN + A+K M
Sbjct: 245 TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 304
Query: 181 KEDDLCVPNIHTYNILI------GMFMALNRM--DMVRE-----------IWNHV-KGSE 220
C PN+ T+NI++ G +M R+ DM+R+ + N + +
Sbjct: 305 PSYG-CKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRL 363
Query: 221 LGLDLD---------------SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
LG +D SY L+HG C+++K A +Y M+ +G P VT+ T
Sbjct: 364 LGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNT 423
Query: 266 LYRGL 270
L L
Sbjct: 424 LLTAL 428
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 119/252 (47%), Gaps = 14/252 (5%)
Query: 25 RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84
+FL MI +G P+V+ L+ G CR R + + N+ G PDV
Sbjct: 127 KFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENS----------GAVPDV 176
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++++++ Y ++ + +L+ L M + P V TY ++++ LC G++++A E+L
Sbjct: 177 ITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDR 233
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
++ P TY + AMKL +M++ C P++ TYN+LI
Sbjct: 234 QLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG-CKPDVVTYNVLINGICKEG 292
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
R+D + N++ ++ ++ +++ +C +W +A + +M+ KG P VTF
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352
Query: 265 TLYRGLIQSDML 276
L L + +L
Sbjct: 353 ILINFLCRKRLL 364
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y L++G+C+ ++D A +L M+ RG P++VTYN LL +C+
Sbjct: 380 VPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCK--------- 430
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A ++ +++ +G P + +++ V+ ++ K + +++ L M+ KG+ P +
Sbjct: 431 -DGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDII 489
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+++++ L G++++A ++ +M + PSA TYN + + A+ M
Sbjct: 490 TYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYM 549
Query: 181 KEDDLCVPNIHTYNILI 197
E C P TY ILI
Sbjct: 550 VEKG-CKPTEATYTILI 565
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 36/244 (14%)
Query: 58 NERFEKTIRNAE-----KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
N K +RN E K + M +G PDV + + ++ + R+ K + + + ++
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
G P V TY ++ C G I+ A E+L M V+P TYN +
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKE 226
Query: 173 AMK-LYRQMKEDDLCVPNIHTYNILI-------GMFMALNRMDMVREIWNHVKGSELGLD 224
AM+ L RQ++ + C P++ TY ILI G+ A+ +D +R+ KG + D
Sbjct: 227 AMEVLDRQLQRE--CYPDVITYTILIEATCNDSGVGQAMKLLDEMRK-----KGCK--PD 277
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL-----------IQS 273
+ +Y +LI+G+C++ + EA ++ M G P +T + R + + S
Sbjct: 278 VVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLS 337
Query: 274 DMLR 277
DMLR
Sbjct: 338 DMLR 341
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 142/287 (49%), Gaps = 18/287 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y SL+ G C R A R + +M+ R + PNV+T+ L+N R E
Sbjct: 212 YNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVR----------EGKFL 261
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A+K ++EM R I+PDV +++ ++H + + L+ M KG P V TY +++
Sbjct: 262 EAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLI 321
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYRQMKEDD 184
C R+++ +L+ EM + G+ T+N + Y GR DA A +++ +M
Sbjct: 322 NGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDA--AQEIFSRMGSR- 378
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
PNI TY+IL+ R++ ++ ++ SE+ LD+ +Y ++IHG+C ++A
Sbjct: 379 ---PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDA 435
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
F + KGL P VT+ T+ G + + L +K+ E+ +
Sbjct: 436 WDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGL 482
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 141/305 (46%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ ++ L+ K D+ M G+ ++ TYN+++N +CR + R
Sbjct: 66 LPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCS------R 119
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F A V +M G EPDV + S +++ + + ++ ++D ++ M+E V
Sbjct: 120 FVI----ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVV 175
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C G + +A L G M R+GV TYN + A +L R M
Sbjct: 176 IYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDM 235
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D+ VPN+ T+ LI F+ + ++ + + + D+ +Y +IHGLC +
Sbjct: 236 VMRDI-VPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQ 294
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFGS 295
EA Q M+ KG P VT+ TL G ++ + +L +++ + +++TF +
Sbjct: 295 VDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNT 354
Query: 296 EFQNY 300
Q Y
Sbjct: 355 IIQGY 359
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 42/216 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y S+I+G C ++D A++ L M+ +G P+VVTYN L+NG C+
Sbjct: 277 PDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCK---------- 326
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-------- 113
K + K+ EM RG+ D +F+ ++ Y +A +P + + + M +
Sbjct: 327 TKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRTYSI 386
Query: 114 ---GICPT---------------------VATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
G+C + TY V+ +C G +EDA +L + G
Sbjct: 387 LLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKG 446
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ P TY + ++ + A LYR+M+ED L
Sbjct: 447 LEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGL 482
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 139/281 (49%), Gaps = 11/281 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ L++GWC+ + D A + + +M E G EP+V +Y + C E+ R
Sbjct: 266 FNVLMHGWCRARKFDNARKAMEDMKELGFEPDVFSYTSFIEAYCH----------ERDFR 315
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
++V +EMR G P+ +++ V+ +A + +L+ MK G Y+ ++
Sbjct: 316 KVDQVLEEMRENGCPPNAVTYTTVMLHLGKAGQLSKALEVYEKMKCDGCVADTPVYSCMI 375
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
L GR++DA ++ +M + GV TYN A++L ++M ED C
Sbjct: 376 FILGKAGRLKDACDVFEDMPKQGVVRDVVTYNTMISTACAHSREETALRLLKEM-EDGSC 434
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+ TY+ L+ M RM +++ + +H+ +++ DL +Y++L++ LC+ K +A
Sbjct: 435 KPNVGTYHPLLKMCCKKKRMKVLKFLLDHMFKNDISPDLATYSLLVNALCKTGKVADAYS 494
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+ EM+ KG P+ T + L L ML R+++ +D
Sbjct: 495 FLEEMVLKGFTPKPSTLKGLAGELESLSMLEEKERVEEWMD 535
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 14/238 (5%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP-DVTSFS 88
M + GV + NVL++ + + S + +A KV + +G+ P SF+
Sbjct: 220 MDKFGVNKDTAALNVLIDALVKGDS----------VEHAHKVV--LEFKGLIPLSSHSFN 267
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
+++H + RA K + + MKE G P V +YTS ++ C +++L EM N
Sbjct: 268 VLMHGWCRARKFDNARKAMEDMKELGFEPDVFSYTSFIEAYCHERDFRKVDQVLEEMREN 327
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G P+A TY + A+++Y +MK D CV + Y+ +I + R+
Sbjct: 328 GCPPNAVTYTTVMLHLGKAGQLSKALEVYEKMKCDG-CVADTPVYSCMIFILGKAGRLKD 386
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+++ + + D+ +Y +I C + + A + EM + P T+ L
Sbjct: 387 ACDVFEDMPKQGVVRDVVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVGTYHPL 444
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 6/161 (3%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T+ T V++ L + EDA E M + GV+ N A K+
Sbjct: 193 TLETMAKVIRRLAKARKHEDAIEAFRRMDKFGVNKDTAALNVLIDALVKGDSVEHAHKVV 252
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIHGL 235
+ K L + H++N+L+ + + D R+ +K ELG + D SYT I
Sbjct: 253 LEFK--GLIPLSSHSFNVLMHGWCRARKFDNARKAMEDMK--ELGFEPDVFSYTSFIEAY 308
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
C ++ +++ Q EM E G P VT+ T+ L ++ L
Sbjct: 309 CHERDFRKVDQVLEEMRENGCPPNAVTYTTVMLHLGKAGQL 349
>gi|222624423|gb|EEE58555.1| hypothetical protein OsJ_09859 [Oryza sativa Japonica Group]
Length = 858
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 14/261 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + + L+ GW + AE F+ EM E GVEP++VTYN L++ C+
Sbjct: 218 NRQTFNILLSGW---KSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCK----------N 264
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ + NA K+ DEMR + I PDV +++ ++ +P + L M E G P V Y
Sbjct: 265 RGVENAYKLLDEMREKDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAY 324
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ ++ R+ DA L+ EM G+ P+A TYN FF+ Y D A +LY +M+
Sbjct: 325 NTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNLFFRCYYWAYDIGSAWQLYERMRS 384
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ C PN + ++ + R+ E+W+ + + G +L LC++ K
Sbjct: 385 EG-CFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLD 443
Query: 243 EACQYFVEMIEKGLLPQKVTF 263
EA + F +MIE G P V F
Sbjct: 444 EAERCFHQMIELGQKPSNVAF 464
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
EDAE + EM GV P TYN + + A KL +M+E D+ P++ TY
Sbjct: 233 EDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDIS-PDVITYTS 291
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
LIG + + D + + + ELG D+ +Y I ++ +A EM
Sbjct: 292 LIGGLGLIGQPDKAKHLLKEMH--ELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMAS 349
Query: 254 KGLLPQKVTFETLYR 268
KGL+P T+ +R
Sbjct: 350 KGLMPNATTYNLFFR 364
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 148/293 (50%), Gaps = 17/293 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y +LI G+C+ ++ LG+M+E+G++PNV+TY+ +++ + +
Sbjct: 247 PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGN------- 299
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A V+ +M VRG P+V +F+ ++ Y + +L+ N M E+G P V
Sbjct: 300 ---VELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVA 356
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LCS G++ +A + +M RNG SP+ TY + D GA +++ +M
Sbjct: 357 YNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMM 416
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK---GSELGLDLDSYTMLIHGLCEK 238
+ C+PN+ Y ++ + L R M + W+ ++ + ++ I GLC
Sbjct: 417 TNG-CIPNVVVYTSMVNV---LCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCS 472
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ + A F +M + G P T+ + GL++ + ++ L +++E+ +
Sbjct: 473 GRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGM 525
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 11/286 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +TSL+ G+ R+ A M E G EPNVV YN L++G+C +
Sbjct: 317 PNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMG----- 371
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V +M G P+V+++ ++ +++A + + N M G P V
Sbjct: 372 -----EAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVV 426
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS+V LC A L+ +M + P+ T+N F K A+ L+ QM+
Sbjct: 427 YTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQME 486
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C PNI TYN ++ + NR+ E+ ++ + L+L +Y + G C K+
Sbjct: 487 QYG-CSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKF 545
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+EA + +M+ G+ P +T+ TL ++T +L KL
Sbjct: 546 EEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLS 591
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 126/277 (45%), Gaps = 20/277 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P VK+Y L+ NR M E M G EPNV TYN+LL +C+ N R
Sbjct: 147 PTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCK------NNR- 199
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI--CPTV 119
+ A K+ EM +G EPDV S++ V+ S+ L K+ +E I P V
Sbjct: 200 ---VDGACKLLVEMSNKGCEPDVVSYTTVISSMSK-------LGKVEEARELSIRFQPNV 249
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+ Y +++ C ++++ LLG+MV G+ P+ TY+ G + A+ ++ +
Sbjct: 250 SVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAK 309
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M C PN++T+ L+ + R+ IWN + ++ +Y LIHGLC
Sbjct: 310 MFVRG-CSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHG 368
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K EA +M G P T+ L G ++ L
Sbjct: 369 KMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDL 405
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 136/284 (47%), Gaps = 17/284 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y L+ CK NR+D A + L EM +G EP+VV+Y +++ + + + E
Sbjct: 182 PNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVE--EAR 239
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +IR +P+V+ ++ +++ + R +K + L M EKGI P V T
Sbjct: 240 ELSIR-------------FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVIT 286
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++V+ L G +E A + +M G SP+ T+ K Y R A+ ++ +M
Sbjct: 287 YSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMA 346
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ PN+ YN LI + +M + + ++ + ++ +Y LI G +
Sbjct: 347 EEGF-EPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDL 405
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKK 284
A + + +M+ G +P V + ++ L +S M + W ++K
Sbjct: 406 VGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEK 449
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 45/273 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV +YTS++ C+ + A + +M PN VT+N + G+C R
Sbjct: 421 IPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSG------R 474
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I +F +M G P++ +++ VL + ++ + +L+ + M+EKG+ +
Sbjct: 475 VECAIN----LFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLV 530
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ C+ G+ E+A +LLG+M+ GV P A TYN Y + A++L ++
Sbjct: 531 TYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKL 590
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
VP ++ +YT L+ G+C +
Sbjct: 591 SAGGKWVP-----------------------------------EVAAYTSLLWGICNQIG 615
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+EA Y +M+ +G+ T+ L RGL S
Sbjct: 616 VEEAVLYLDKMLNEGICLNAATWNALVRGLFNS 648
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 6/209 (2%)
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + + + +M++ GI F V++ Y R + +L ++E G PTV
Sbjct: 92 ECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKI 151
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ + S R + E + M R+G P+ TYN K +GA KL +M
Sbjct: 152 YNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMS 211
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P++ +Y +I L +++ RE+ + ++ Y LI+G C + K
Sbjct: 212 NKG-CEPDVVSYTTVISSMSKLGKVEEARELSIRFQP-----NVSVYNALINGFCREYKV 265
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
KE +M+EKG+ P +T+ T+ L
Sbjct: 266 KEVFLLLGQMVEKGIDPNVITYSTVISSL 294
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
++ + LL +M G+S S + + YR A A+K++ +++E C P + YN
Sbjct: 95 VDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFG-CQPTVKIYN 153
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
L+ ++ NR M+ I++++K ++ +Y +L+ LC+ + AC+ VEM K
Sbjct: 154 HLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNK 213
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
G P V++ T+ + + + R L
Sbjct: 214 GCEPDVVSYTTVISSMSKLGKVEEARELS 242
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 139/300 (46%), Gaps = 26/300 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPNER 60
P + Y +L+ G CK+ R++ A L ++++ G P+VVTY L++G+ + + S +
Sbjct: 198 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 257
Query: 61 FEKT------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F++ I A V+ M +G PDV + S ++ +
Sbjct: 258 FKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCK 317
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + ++ M+ +G+ P Y++++ LC +++ A E+L +M + +P T
Sbjct: 318 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 377
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN D A + +M E C P+++TYNIL+ F D +++ +
Sbjct: 378 YNILIDGLCKSGDVEAARAFFDEMLEAG-CKPDVYTYNILVSGFCKAGNTDAACGVFDDM 436
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
S ++ +Y LI GLC++++ +A YF M E+G P + +L GL +S L
Sbjct: 437 SSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKL 496
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 112/252 (44%), Gaps = 15/252 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT+LI G + +I A M +G P+VVT + +++G+C+ I
Sbjct: 273 YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGR----------IG 322
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++F M RG+ P+ +S ++H +A K +L+ L MK+ P TY ++
Sbjct: 323 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 382
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G +E A EM+ G P TYN + + + A ++ M C
Sbjct: 383 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSH-C 441
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEKQKWKEA 244
PN+ TY LI ++ + H+K E G DS Y+ L+ GLC+ K +
Sbjct: 442 SPNVVTYGTLISGLCKRRQLTKASLYFQHMK--ERGCPPDSFVYSSLVDGLCKSGKLEGG 499
Query: 245 CQYFVEMIEKGL 256
C F EM G+
Sbjct: 500 CMLFDEMERSGV 511
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 133/275 (48%), Gaps = 14/275 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRAS-LHPN 58
+P+V+ + LI G+C + A + EM E GV P++ T+N++L+G+C+ L
Sbjct: 91 LPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAM 150
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ FE T N G D+ +++ ++ ++ K Q ++ + + G PT
Sbjct: 151 DHFETTTTN-----------GCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPT 199
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ATY +++ LC GR+E+A +LL ++V NG +P TY K + A KL++
Sbjct: 200 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 259
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M L + + Y LI + ++ ++ + D+ + + +I GLC+
Sbjct: 260 EMALRGLVLDTV-CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 318
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ A + F M +GL P +V + L GL ++
Sbjct: 319 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 353
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI G CK ++ A F EM+E G +P+V TYN+L++G C+ +
Sbjct: 373 PDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDA---- 428
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF--MKEKGICPTV 119
A VFD+M P+V ++ ++ + + QL+ L F MKE+G P
Sbjct: 429 ------ACGVFDDMSSSHCSPNVVTYGTLISGLCK--RRQLTKASLYFQHMKERGCPPDS 480
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y+S+V LC G++E L EM R+GV+ S F + + + A+ L+
Sbjct: 481 FVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANR-VDEAVSLFNA 539
Query: 180 MKEDDLCVPNIHTYNILIGMFM 201
++++ + P+ + YN +I +
Sbjct: 540 IRKEGM--PHPYAYNSIISTLI 559
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%)
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
R +A LL + P ET+N Y ++ A + R+M+ED P++ T+
Sbjct: 74 RHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTH 133
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N+++ ++ + + + +D+ +YT ++ L + +K ++A ++
Sbjct: 134 NLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITA 193
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
G P T+ L GL + L L +K+ + T
Sbjct: 194 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 232
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 141/316 (44%), Gaps = 29/316 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RR------- 52
PN+ Y +I G C+ R+D A+ L + G +P++V+Y +L G+C RR
Sbjct: 220 PNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVL 279
Query: 53 ------ASLHPNE-RFEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PNE F+ +R A +V +M G P+ T +IV++ +
Sbjct: 280 FAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICK 339
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D LN M G P +YT+V++ LC GR E A+ELL EMVR P+ T
Sbjct: 340 QGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVT 399
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N F + A+KL M E C I TYN L+ F R+D E++N++
Sbjct: 400 FNTFICILCQKGLIEQAIKLIELMPEYG-CSVGIVTYNALVHGFCVQGRVDSALELFNNL 458
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ +YT L+ GLC ++ A + EMI+K VTF L Q +
Sbjct: 459 PCEP---NTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFV 515
Query: 277 RTWRRLKKKLDEESIT 292
L ++ E T
Sbjct: 516 EEAMELVNQMMEHGCT 531
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 11/265 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M++RG +P+VVTY VLL VC+ + A V DEMR +G P++ ++++
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFG----------EAMNVLDEMRAKGCTPNIVTYNV 227
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+++ R + + + LN + G P + +YT+V+K LC+ R +D + L EMV
Sbjct: 228 IINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK 287
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P+ T++ + + A+++ +QM + C PN NI+I R+D
Sbjct: 288 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG-CTPNTTLCNIVINAICKQGRVDDA 346
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ N++ D SYT ++ GLC +W+ A + EM+ K P +VTF T
Sbjct: 347 YDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICI 406
Query: 270 LIQSDMLRTWRRLKKKLDEESITFG 294
L Q ++ +L + + E + G
Sbjct: 407 LCQKGLIEQAIKLIELMPEYGCSVG 431
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+L+ G C R+D A L EMI++ N VT+NVL++ C++
Sbjct: 462 PNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKG-------- 513
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++ ++M G P++ +F+ +L ++ + +L+ L+ + KG+ T
Sbjct: 514 --FVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTIT 571
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+SVV L R E+A ++L + G+ P YN R + + A+ + M
Sbjct: 572 YSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMV 631
Query: 182 EDDLCVPNIHTYNILI 197
+ C+PN TY ILI
Sbjct: 632 SNG-CMPNESTYIILI 646
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 131/303 (43%), Gaps = 25/303 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + +I CK R+D A FL M G P+ ++Y +L G+CR R+
Sbjct: 325 PNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAG------RW 378
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +A+++ EM + P+ +F+ + + + + ++ + M E G + T
Sbjct: 379 E----HAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVT 434
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V C GR++ A EL + P+ TY + + A +L +M
Sbjct: 435 YNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMI 491
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ D C N T+N+L+ F ++ E+ N + +L ++ L+ G+ +
Sbjct: 492 QKD-CPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNS 550
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
+EA + ++ KG+ +T+ ++ L + D RT EE+I Q+
Sbjct: 551 EEALELLHGLVSKGVSLDTITYSSVVDVLSRED--RT---------EEAIQMLHAVQDMG 599
Query: 302 FKP 304
+P
Sbjct: 600 MRP 602
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V MY +++ CK D A F M+ G PN TY +L+ G+
Sbjct: 602 PKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAH---------- 651
Query: 62 EKTIRNAEKVFDEMRVRGI 80
E ++ A V E+ +G+
Sbjct: 652 EGLLKEARYVLSELYAKGV 670
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 135/285 (47%), Gaps = 10/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ MYT ++ CK R+ A L EMI G P ++T+N L++G CR
Sbjct: 115 PDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCR---------- 164
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + A+ + M G++ DV +++ ++ +A + Q + L MK G P V
Sbjct: 165 EKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVA 224
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S V LC G++ +A ++L +M + P+ TYN + A+++ QM
Sbjct: 225 YSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMA 284
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C N+ Y+ ++ L R R + + + D+ +Y+ L++GLC+ K
Sbjct: 285 SSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKI 344
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+EA + EM +G P VT+ +L GL L R+ +++
Sbjct: 345 EEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 138/287 (48%), Gaps = 13/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + +L+ G+ K R ER L M RG++PNVV+YN LL G+C+ H
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWH----- 62
Query: 62 EKTIRNAEKVFDEMRVRG--IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
AE++ +M RG PD+ ++S +L Y +A K + S + L + +G+ P
Sbjct: 63 -----EAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDA 117
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
YT V+ LC R+ +A ELL EM+R G P+ T+N K+ A L +
Sbjct: 118 LMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQT 177
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + ++ TYN L+ R+ ++ +K S D+ +Y+ ++GLC+
Sbjct: 178 MAASGV-KADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSG 236
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
K A Q +M + P VT+ T+ GL +S + T + +++
Sbjct: 237 KVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQM 283
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 15/248 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+S +YG CK ++ A + L +M + +PNVVTYN +L+G+C+
Sbjct: 220 PDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGK------- 272
Query: 62 EKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A ++ ++M G +V +S V+ + + Q + + M G P V
Sbjct: 273 ---IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV 329
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+S+V LC G+IE+A E + EM G P+A TY A ++ +M
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Query: 181 KED----DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
D C P++ TYN LIG R+D + + ++ D SY+ ++ GL
Sbjct: 390 SSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLA 449
Query: 237 EKQKWKEA 244
+ +A
Sbjct: 450 RSGRALQA 457
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 139/312 (44%), Gaps = 36/312 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + + +LI G C+ ++MA+ L M GV+ +VVTYN L++G+C+ L
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQ----- 204
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE++ + M+ G PDV ++S ++ ++ K + L M++ P V T
Sbjct: 205 -----EAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVT 259
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G+I+ A E++ +M A + C +G KL R +
Sbjct: 260 YNTILDGLCKSGKIDTALEMMEQM--------ASSDGCGLNVVGYSTVVDGLCKLGRTQE 311
Query: 182 EDDL--------CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
+ C P++ TY+ L+ +++ E + + +Y L+H
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371
Query: 234 GLCEKQKWKEACQYFVEMIEKGLL-----PQKVTFETLYRGLIQS----DMLRTWRRLKK 284
GLC + EA + EM G P T+ L GL ++ D L+ ++R++
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS 431
Query: 285 K-LDEESITFGS 295
+ D + +++ +
Sbjct: 432 QGCDPDGVSYST 443
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 36/231 (15%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G P+ +F+ +++ +S+ +P L M +GI P V +Y +++ LC R +A
Sbjct: 5 GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEA 64
Query: 139 EELLGEMVRNG--VSPSAETYNCFFKEYRGRKDANGAMKLY-----RQMKEDDL------ 185
EEL+ +M+ G +P TY+ Y + +L R ++ D L
Sbjct: 65 EELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVM 124
Query: 186 -----------------------CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222
C P + T+N LI ++M + + S +
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVK 184
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
D+ +Y L+ GLC+ + +EA Q M G P V + + GL +S
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS 235
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 1/183 (0%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M G P T+ ++V GR D E LL M G+ P+ +YN + +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 170 ANGAMKLYRQM-KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
+ A +L R M P++ TY+ L+ + +++ RE+ V L D Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
T ++ LC+ + EA + EMI G P +TF TL G + L L + +
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 289 ESI 291
+
Sbjct: 181 SGV 183
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 147/318 (46%), Gaps = 48/318 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN T+L+ G CK R+D A L M ++G + +VV Y L++G C +L
Sbjct: 66 PNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD----- 120
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+++FDEM +GI +V ++S ++H R + + + LN M E GI P V T
Sbjct: 121 -----RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVT 175
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF-------------FKEYR--- 165
YT ++ LC GR A +LL MV G PS TYN FK R
Sbjct: 176 YTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMI 235
Query: 166 --GRK-----------------DANGAMKLYRQMKEDDLCV-PNIHTYNILIGMFMALNR 205
G+K + A+KL+ M +++ C+ PN+ T+N+LIG R
Sbjct: 236 EKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGR 295
Query: 206 MDMVREIWNH-VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+ +I VK G +L +Y ML+ G + K KEA + + ++++ G +P T+
Sbjct: 296 LTKAVKIHRKMVKKGSCG-NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 354
Query: 265 TLYRGLIQSDMLRTWRRL 282
L G + ML + L
Sbjct: 355 ILIDGFCKMRMLNIAKGL 372
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 146/301 (48%), Gaps = 18/301 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT LI G CK R A L M+E+G EP+ VTYNVLL+G+C+
Sbjct: 171 PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK---------- 220
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC--PTV 119
E + +A K+ M +G + DV +++ ++ K +L N M + C P V
Sbjct: 221 EGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNV 280
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+ ++ LC GR+ A ++ +MV+ G + TYN AM+L++Q
Sbjct: 281 FTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQ 340
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ + VPN TY+ILI F + +++ + ++ ++ L L Y L+ LC++
Sbjct: 341 VLDLGF-VPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 399
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFG 294
++A F EM P ++F T+ G +++ + + L+ K+ E +++TF
Sbjct: 400 SLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFS 459
Query: 295 S 295
+
Sbjct: 460 T 460
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 130/292 (44%), Gaps = 25/292 (8%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
++ G C+ + A + EM + V P++V+YN L+NG+C+ K ++ A
Sbjct: 4 VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCK----------AKKLKEAV 53
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+ EM G P+ + + ++ + + +++ L MK+KG V Y +++
Sbjct: 54 GLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGF 113
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C+ G ++ +EL EM+ G+S + TY+C A + M E + P+
Sbjct: 114 CNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI-HPD 172
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
+ TY LI R ++ N + KG E +Y +L+ GLC++ +A +
Sbjct: 173 VVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEE--PSNVTYNVLLSGLCKEGLVIDAFKI 230
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
MIEKG VT+ TL +GL K K+DE F S F N
Sbjct: 231 LRMMIEKGKKADVVTYNTLMKGLCD----------KGKVDEALKLFNSMFDN 272
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 10/233 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y+ LI G+CK+ +++A+ EM G+ P + YN L+ +C+ SL
Sbjct: 347 VPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL----- 401
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A+ +F EM EPD+ SF+ ++ +A Q + M E G+ P
Sbjct: 402 -----EQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDAL 456
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+++++ L G +++A+ L MV +G +P A Y+ K + D + L QM
Sbjct: 457 TFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQM 516
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
+ IL + ++ +D++ + +G+ G + +L+
Sbjct: 517 AAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQ 569
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 129/273 (47%), Gaps = 17/273 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMI--ERGVEPNVVTYNVLLNGVCRRASLHPNE 59
+V Y +L+ G C ++D A + M E +EPNV T+N+L+ G+C+
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCK-------- 292
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
E + A K+ +M +G ++ +++++L +A K + +++ + + G P
Sbjct: 293 --EGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNS 350
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY+ ++ C + A+ L EM +G++P+ YN A L+++
Sbjct: 351 FTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQE 410
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCE 237
M + C P+I ++N +I + V+E+ +K E+GL D +++ LI+ L +
Sbjct: 411 MGNAN-CEPDIISFNTMIDGTLKAGDFQFVKEL--QMKMVEMGLRPDALTFSTLINRLSK 467
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ EA M+ G P + +++L +GL
Sbjct: 468 LGELDEAKSALERMVASGFTPDALVYDSLLKGL 500
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 138/290 (47%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +Y +LI G CK A R L M + +P+VV Y L++ +C+
Sbjct: 177 PDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCK---------- 226
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A +F EM +GI P++ + + +++ + + LN M + I P +
Sbjct: 227 DRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAIS 286
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T+VV LC G + A +++ M ++GV P TY + R + + A+K++ M
Sbjct: 287 LTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMV 346
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN+ +YN LI + + RMD ++ + +L + +Y LIHGLC +
Sbjct: 347 HKG-CAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRL 405
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++A F EM+ G +P VT+ L L ++ L L K ++ ++
Sbjct: 406 QDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNL 455
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 134/274 (48%), Gaps = 11/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN T+++ CK + A + M + GVEP+VVTY L++G C R+ +
Sbjct: 281 MPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMD---- 336
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A KVFD M +G P+V S++ +++ Y + + ++ M + + P
Sbjct: 337 ------EAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTV 390
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC GR++DA L EMV G P TY + AM L + +
Sbjct: 391 TYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAI 450
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +L P+I Y I+I ++ R++++++ L ++ +Y ++ HGLC++
Sbjct: 451 EGSNL-DPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGL 509
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA + F+EM E T+ T+ +G ++++
Sbjct: 510 LDEATKLFMEMDENACSADGCTYNTITQGFLRNN 543
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 140/316 (44%), Gaps = 30/316 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+V +Y +LI+ CK + A EMI +G+ PN+VT N L+ +C
Sbjct: 212 PDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTL 271
Query: 52 -----RASLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ + PN E + A V D M G+EPDV +++ ++ +
Sbjct: 272 LNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCL 331
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ ++ + M KG P V +Y +++ C R++ A L EM R + P+ T
Sbjct: 332 RSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVT 391
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLC--VPNIHTYNILIGMFMALNRMDMVREIWN 214
YN A+ L+R+M C +P++ TY IL+ +D +
Sbjct: 392 YNTLIHGLCHVGRLQDAIALFREMVA---CGQIPDLVTYRILLDYLCKNCHLDKAMALLK 448
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
++GS L D+ YT++I G+C + ++A F + KGL P T+ + GL +
Sbjct: 449 AIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRG 508
Query: 275 MLRTWRRLKKKLDEES 290
+L +L ++DE +
Sbjct: 509 LLDEATKLFMEMDENA 524
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 13/268 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV LI +C +NR++ A L ++++ G +P+ ++ L+ G+C E
Sbjct: 108 NVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLC----------LE 157
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVAT 121
I A +FD+M G +PDV ++ +++ + ++ L M EKG C P V
Sbjct: 158 GQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSM-EKGNCQPDVVV 216
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC + A L EM+ G+SP+ T N + L +M
Sbjct: 217 YGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMV 276
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + +PN + ++ + ++ + + S + D+ +YT LI G C + +
Sbjct: 277 DSKI-MPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEM 335
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA + F M+ KG P ++ TL G
Sbjct: 336 DEAVKVFDMMVHKGCAPNVFSYNTLING 363
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y +LI+G C + R+ A EM+ G P++VTY +LL+ +C+ L
Sbjct: 386 IPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMA 445
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K I + ++PD+ ++IV+ RA + + + D + + KG+ P V
Sbjct: 446 LLKAIEGSN----------LDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVW 495
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY + LC G +++A +L EM N S TYN + + + + A++L +M
Sbjct: 496 TYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEM 555
Query: 181 KEDDLCVPNIHTYNILIGMF 200
++ T +L+GM
Sbjct: 556 LARGFSC-DVSTTTLLVGML 574
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/263 (18%), Positives = 113/263 (42%), Gaps = 11/263 (4%)
Query: 14 WCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFD 73
+ N +D A M+ P++V + +L + + +R+ + + K
Sbjct: 49 YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKV------KRYSTVLSLSRK--- 99
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
M GI +V + +++++ + ++ + L + + G P A++T+++K LC G
Sbjct: 100 -MDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEG 158
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
+I +A L +M+ G P Y + A++L R M++ + C P++ Y
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGN-CQPDVVVY 217
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
LI + +++ + + ++ + L++ LC +WK EM++
Sbjct: 218 GTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVD 277
Query: 254 KGLLPQKVTFETLYRGLIQSDML 276
++P ++ T+ L + M+
Sbjct: 278 SKIMPNAISLTTVVDALCKEGMV 300
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP-NIHTY 193
++DA M+ PS + K + + L R+M D +P N++T
Sbjct: 55 LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKM--DSFGIPHNVYTL 112
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N+LI F LNR++ + + D S+T LI GLC + + EA F +MI
Sbjct: 113 NVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIW 172
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+G P V + TL GL ++ RL + +++
Sbjct: 173 EGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEK 207
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 25/134 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++++YT +I G C+ ++ A + +G++PNV TYN++ +G+C+R L +
Sbjct: 457 PDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKL 516
Query: 62 --------------------EKTIRNAE-----KVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ +RN E ++ +EM RG DV++ ++++ + S
Sbjct: 517 FMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSD 576
Query: 97 AHKPQLSLDKLNFM 110
Q KL M
Sbjct: 577 DGLDQSEAHKLEDM 590
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 145/325 (44%), Gaps = 52/325 (16%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V YT+LI G CK +D A+ L +M + G PNVVTY L++G+C+ H
Sbjct: 44 SVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPH------ 97
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLH---VYSRAHKPQLSLDKLNFMKEKGICPTV 119
+A + M G EPD+ +++ ++H + +R L L +L M E G P V
Sbjct: 98 ----DAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQEL--MIESGRIPDV 151
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY + + LC G+++ E+L EM R G+SP T+ + A ++++
Sbjct: 152 VTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKG 211
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREI--------------------------- 212
M E CVP+ TY+I++ NR+D V E+
Sbjct: 212 MLERG-CVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAG 270
Query: 213 ------WNHVKGSELGLDLDSYT--MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
W + + E G ++ YT I LC K+ A + MIE G LP +++
Sbjct: 271 DIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYN 330
Query: 265 TLYRGLIQS-DMLRTWRRLKKKLDE 288
+ GL +S ++ W+ +K LD
Sbjct: 331 FVIDGLCKSGNVDDAWKLSRKMLDS 355
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 128/316 (40%), Gaps = 62/316 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGE-MIERGVEPNVVTYNVLLNGVCRRASLHPN-E 59
P++ Y SLI+G C NR+D A L E MIE G P+VVTYN ++G+C+ L E
Sbjct: 113 PDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLE 172
Query: 60 RFEKT------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E+ I +A +VF M RG PD ++SI+L S
Sbjct: 173 MLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLS 232
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE---------------- 139
RA++ + L M + G ATY ++ L G IE A
Sbjct: 233 RANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVY 292
Query: 140 ---ELLGEMVRNGVSPSAE----------------TYNCFFKEYRGRKDANGAMKLYRQM 180
+G + R+G P A+ +YN + + A KL R+M
Sbjct: 293 THNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKM 352
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-DLDSYTMLIHGLCEKQ 239
+ C P++ +N LI F R+ +++ +K + + D+ +Y +I G +
Sbjct: 353 LDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFG 412
Query: 240 KWKEACQYFVEMIEKG 255
K+A EM G
Sbjct: 413 SLKQAKLLLEEMQAVG 428
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 123/292 (42%), Gaps = 47/292 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y + I G CK ++D L EM G+ P+VVT+ +++G+C+
Sbjct: 148 IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCK--------- 198
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I +A +VF M RG PD ++SI+L SRA+
Sbjct: 199 -ANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRAN---------------------- 235
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
R++ EE+L MV++G + TY D A Y Q
Sbjct: 236 -------------RLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQA 282
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E CV ++T+N IG + + + I + S +L SY +I GLC+
Sbjct: 283 MEAG-CVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGN 341
Query: 241 WKEACQYFVEMIEKGLL-PQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+A + +M++ G P + F TL G ++ L ++L K++ ++I
Sbjct: 342 VDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNI 393
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 111/249 (44%), Gaps = 10/249 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M R + YN L+ G+C+ + R+A ++ M G + V +++
Sbjct: 1 MASRHFRLDAAIYNTLIAGLCK----------ARKPRHALELLHVMAANGYDASVVTYTT 50
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ ++ + L M + G P V TYT+++ LC R DA + + M+R+G
Sbjct: 51 LIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSG 110
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P TYN + A + +++ + +P++ TYN I ++D
Sbjct: 111 CEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKG 170
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
E+ + + D+ ++ +I GLC+ + +A Q F M+E+G +P +T+ +
Sbjct: 171 LEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDN 230
Query: 270 LIQSDMLRT 278
L +++ L T
Sbjct: 231 LSRANRLDT 239
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 4/176 (2%)
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
A Y +++ LC + A ELL M NG S TY D + A L +
Sbjct: 10 AAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQ 69
Query: 179 QMKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+M D C PN+ TY LI G+ A D ++ + ++ S DL +Y LIHGLC
Sbjct: 70 KMA-DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLR-SGCEPDLVTYNSLIHGLCM 127
Query: 238 KQKWKEACQYFVE-MIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ +A E MIE G +P VT+ T GL ++ L + +++D I+
Sbjct: 128 ANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIS 183
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 138/301 (45%), Gaps = 16/301 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + ++I+G+ K + A EM+++GV P+V TYN +++ +C+
Sbjct: 230 PDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCK---------- 279
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + AE V +M +G+EPD +++ ++H YS + + S M KG+ P T
Sbjct: 280 ARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVT 339
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++S + LC GR +DAEE+ M G P +Y+ Y L+ M
Sbjct: 340 FSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMA 399
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + V N H NILI MD ++ ++G + ++ +Y+ LI C +
Sbjct: 400 DKGI-VSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRL 458
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL-IQSDMLRT----WRRLKKKLDEESITFGSE 296
+A + F +MI G+ P + +L G + D+++ + K L +I F S
Sbjct: 459 ADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSS 518
Query: 297 F 297
Sbjct: 519 I 519
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 128/271 (47%), Gaps = 12/271 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y S++ CK +D AE L +M+++GVEP+ VTYN +++G S H E
Sbjct: 264 VPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGY--SCSGHWKE- 320
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ K+F +M +G+ PD +FS + + + + + + +M KG P +
Sbjct: 321 -------SAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIV 373
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y+ ++ + GR D L M G+ + N + R + AM ++ +M
Sbjct: 374 SYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEM 433
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + PN+ TY+ LI F + R+ E ++ + + + Y LIHG C
Sbjct: 434 QGQGV-RPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGD 492
Query: 241 WKEACQYFVEMIEKGL-LPQKVTFETLYRGL 270
+A ++ EM+ KGL P V F ++ L
Sbjct: 493 LVKAKEFISEMMSKGLHRPNIVFFSSIIHSL 523
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 27/297 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PNV Y++LI +C++ R+ A +MI G+EPN Y+ L++G C L
Sbjct: 440 PNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEF 499
Query: 56 ----------HPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
PN F E + +A+ VF+ + G P + +F+ ++ Y
Sbjct: 500 ISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYC 559
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
K + + L+ M GI P V T ++V C G+I+D L EM+ V P+
Sbjct: 560 LVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTV 619
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN + A K++ +M + V +I TY IL+ + D +++
Sbjct: 620 TYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAV-DIDTYKILLKGLCRNDLTDEAITLFHK 678
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ + D+ +I+ L + ++ +EA F + GL+P T+ + R L++
Sbjct: 679 LGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLK 735
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 10/251 (3%)
Query: 8 TSLIYGWCKINRIDMA-ERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
T+ + C R D A + L M E P+ ++YN ++ +C + R ++ +
Sbjct: 163 TTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLC------GDSRSQEALD 216
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+++ E PDV SF+ V+H + + + + + N M +KG+ P V TY S+V
Sbjct: 217 MVQRMAKEGG--RCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIV 274
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC ++ AE +L +MV GV P TYN Y + K++R+M L
Sbjct: 275 DALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGL- 333
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+P+ T++ + R EI+ ++ D+ SY++L+HG + ++ +
Sbjct: 334 IPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNN 393
Query: 247 YFVEMIEKGLL 257
F M +KG++
Sbjct: 394 LFHSMADKGIV 404
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 128/284 (45%), Gaps = 12/284 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ ++S+I+ C R+ A+ +I G P +VT+N L++G C +
Sbjct: 511 PNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVG------KM 564
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK A V D M GIEPDV + + ++ Y ++ K L M K + PT T
Sbjct: 565 EK----AFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVT 620
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V+ L GR A+++ EM+ +G + +TY K + A+ L+ ++
Sbjct: 621 YNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLG 680
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C +I N +I + R + +++ + S L ++ +Y ++I L ++
Sbjct: 681 AMD-CKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSV 739
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRTWRRLKK 284
+EA F M + G P + R L+Q D+++ + K
Sbjct: 740 EEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSK 783
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 19/242 (7%)
Query: 35 VEP-NVVTYNVLLNGVCR--RASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
V P V TY +L++ CR R L P F + A G++ + L
Sbjct: 119 VAPLTVRTYGILMDCCCRARRPDLGP--AFVARLLRA----------GLKTGTIQATTFL 166
Query: 92 HVYSRAHKPQLSLDKL-NFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG- 149
A + ++D L + M E P +Y +V+K LC R ++A +++ M + G
Sbjct: 167 KCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGG 226
Query: 150 -VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
SP ++N + + + + A L+ +M + + VP++ TYN ++ MD
Sbjct: 227 RCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGV-VPDVGTYNSIVDALCKARAMDK 285
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+ + + D +Y +IHG WKE+ + F +M KGL+P VTF +
Sbjct: 286 AEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMS 345
Query: 269 GL 270
L
Sbjct: 346 SL 347
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 7/219 (3%)
Query: 84 VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE-LL 142
V ++ I++ RA +P L + + G+ T+ +KCLC R ++A + LL
Sbjct: 124 VRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLL 183
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM-KEDDLCVPNIHTYNILIGMFM 201
M P A +YN K G + A+ + ++M KE C P++ ++N +I F
Sbjct: 184 HRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 243
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
+ ++N + + D+ +Y ++ LC+ + +A +M++KG+ P V
Sbjct: 244 KQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGV 303
Query: 262 TFETLYRGLIQS----DMLRTWRRLKKK-LDEESITFGS 295
T+ + G S + + +R++ K L +++TF S
Sbjct: 304 TYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSS 342
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 23/255 (9%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA-------HKPQLSLDKLNFM--KEKG--I 115
+A +FDE+ +G S + L +RA + P L L N + +E G +
Sbjct: 60 DAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPALVLALFNRICREEAGPRV 119
Query: 116 CP-TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
P TV TY ++ C C R + + ++R G+ F K K + A+
Sbjct: 120 APLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAV 179
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNR----MDMVREIWNHVKGSELGLDLDSYTM 230
+ + CVP+ +YN +I +R +DMV+ + +G D+ S+
Sbjct: 180 DVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAK--EGGRCSPDVVSFNT 237
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW-----RRLKKK 285
+IHG ++ + +AC F EM++KG++P T+ ++ L ++ + + + K
Sbjct: 238 VIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKG 297
Query: 286 LDEESITFGSEFQNY 300
++ + +T+ + Y
Sbjct: 298 VEPDGVTYNAIIHGY 312
>gi|296088471|emb|CBI37462.3| unnamed protein product [Vitis vinifera]
Length = 673
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 119/238 (50%), Gaps = 15/238 (6%)
Query: 25 RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI---E 81
R L EMIE G P+ TYN ++ C+ + A ++F+ MR +G
Sbjct: 394 RVLEEMIEMGHTPDSFTYNTAIDSFCKAG----------MVTEATELFEFMRTKGSTMSS 443
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
P +++I++ ++ + + + M G+ P V+TY V++ +C G++E+A +
Sbjct: 444 PTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKF 503
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
L EM G P TYNCF K + A+ LY +M E CVP++HT+N+LI MF
Sbjct: 504 LEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAG-CVPSVHTFNMLISMFF 562
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL-LP 258
+ D E W+ + D D+Y ++I GL K ++AC E++ KG+ LP
Sbjct: 563 EIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVVNKGIKLP 620
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +I G C +++ A +FL EM +G P++VTYN L+ +C N++
Sbjct: 478 LPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCE------NKK 531
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ + ++ M G P V +F++++ ++ +P + + + M ++G
Sbjct: 532 SEEAL----GLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTD 587
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ L +C ++EDA LL E+V G+ ++CF + D KL M
Sbjct: 588 TYCVMIEGLFNCNKMEDACFLLDEVVNKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHM 647
Query: 181 KE 182
++
Sbjct: 648 RK 649
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 10/194 (5%)
Query: 100 PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV---SPSAET 156
P + L M E G P TY + + C G + +A EL M G SP+A+T
Sbjct: 389 PSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKT 448
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNH 215
Y KL + M + +P++ TY +I GM +A +++ +
Sbjct: 449 YAIMILALVQSDRTEECFKLIKDMINSGV-LPDVSTYKQVIEGMCLA-GKVEEAYKFLEE 506
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ--- 272
+ D+ +Y + LCE +K +EA + MIE G +P TF L +
Sbjct: 507 MGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGE 566
Query: 273 -SDMLRTWRRLKKK 285
TW + K+
Sbjct: 567 PDGAFETWHEMDKR 580
>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 525
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 152/283 (53%), Gaps = 12/283 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV+ + L+ +CK +I A+ + M+ GVEP+VVTYN +++G C + ++
Sbjct: 215 MPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMN---- 270
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A KVF+ M +G+ P+V ++S ++H + + ++ L+ M G+ V
Sbjct: 271 ------DAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVV 324
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+++++ C GR E A EL M + P+ +T + + A+ L+R+M
Sbjct: 325 TWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKM 384
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ +L + NI TYNI++ + + + RE+++ + + +D+ +YT +I GLC++
Sbjct: 385 EKMNLEL-NIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGL 443
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRL 282
+A ++M E G P + T+ L RGL+Q D+ R+ + L
Sbjct: 444 LDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYL 486
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 146/292 (50%), Gaps = 17/292 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SLI+G C R + A LG M+ +G+ PNV T+NVL++ C+
Sbjct: 181 PDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCK---------- 230
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A+ + M G+EPDV +++ V+ + + ++ M KG+ P V T
Sbjct: 231 EGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVT 290
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYRQ 179
Y+S++ C I A +L EMV NG++ T++ + GR +A A++L+
Sbjct: 291 YSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEA--AIELFCT 348
Query: 180 MKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M E +PN+ T I++ G+F + + ++ ++ L L++ +Y +++ G+C
Sbjct: 349 MHEHHQ-LPNLQTCAIILDGLFKCQFHSEAI-SLFRKMEKMNLELNIVTYNIVLDGMCSF 406
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
K+ +A + F + KG+ V + T+ +GL + +L L K++E
Sbjct: 407 GKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENG 458
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 137/313 (43%), Gaps = 31/313 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----RASLHP 57
P V + +LI G C + A RF + + G E N T+ ++NG+C+ ++
Sbjct: 75 PTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISY 134
Query: 58 NERFEKTIRN----------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E+ E R A F M +GI+PD+ +++ ++H
Sbjct: 135 LEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLC 194
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + L M KGI P V T+ +V C G+I A+ ++ MV GV P
Sbjct: 195 SFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVV 254
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN + N A+K++ M L +PN+ TY+ LI + ++ + +
Sbjct: 255 TYNSVISGHCLLSQMNDAVKVFELMIHKGL-LPNVVTYSSLIHGWCKTRNINKAIFVLDE 313
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ----KVTFETLYRGLI 271
+ + L LD+ +++ LI G C+ + + A + F M E LP + + L++
Sbjct: 314 MVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQF 373
Query: 272 QSDMLRTWRRLKK 284
S+ + +R+++K
Sbjct: 374 HSEAISLFRKMEK 386
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 135/299 (45%), Gaps = 29/299 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V T +I C + LG M + GVEP VVT+ L+NG+C ++ RF
Sbjct: 40 PDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARF 99
Query: 62 EKTIRNAE----------------KVFD-----------EMRVRGIEPDVTSFSIVLHVY 94
++ + KV D E R RG + + ++S ++
Sbjct: 100 ADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDL-LIAYSTIMDSL 158
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ L+L+ + M KGI P + Y S++ LCS GR +A LLG M+R G+ P+
Sbjct: 159 CKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNV 218
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
+T+N + + A + M + P++ TYN +I L++M+ +++
Sbjct: 219 QTFNVLVDNFCKEGKISRAKTIMCFMVHVGV-EPDVVTYNSVISGHCLLSQMNDAVKVFE 277
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ L ++ +Y+ LIHG C+ + +A EM+ GL VT+ TL G ++
Sbjct: 278 LMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKA 336
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 26/227 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA------- 53
+PNV Y+SLI+GWCK I+ A L EM+ G+ +VVT++ L+ G C+
Sbjct: 285 LPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIE 344
Query: 54 ---SLH-----PNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
++H PN + I + A +F +M +E ++ +++IVL
Sbjct: 345 LFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMC 404
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
K + + + + KGI V YT+++K LC G ++DAE+LL +M NG P+
Sbjct: 405 SFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEF 464
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
TYN + R D + + K MK L + T +LI F A
Sbjct: 465 TYNVLVRGLLQRYDISRSTKYLMLMKGKGLS-ADATTTELLISYFSA 510
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 80/188 (42%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G++PDV + +IV++ L M + G+ PTV T+ +++ LC+ G + A
Sbjct: 37 GVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAA 96
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
+ G ++ T+ D GA+ +++ + + Y+ ++
Sbjct: 97 ARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMD 156
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
+ + ++ + + DL +Y LIHGLC +W EA M+ KG++P
Sbjct: 157 SLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMP 216
Query: 259 QKVTFETL 266
TF L
Sbjct: 217 NVQTFNVL 224
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 11/261 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +T+LI+G C+ + A G M +R ++P++V YN L++G C+ +
Sbjct: 360 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEK--- 416
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +++D M R I P+ ++ I+++ Y + + M EKGI PT+
Sbjct: 417 -------ASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLV 469
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +V+K C G A+E LG M+ GV+P +YN + + + A +M
Sbjct: 470 TCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKM 529
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+++ L +P+I TYN+++ F RM + + + D +YT LI+G +
Sbjct: 530 EKEGL-LPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDN 588
Query: 241 WKEACQYFVEMIEKGLLPQKV 261
EA ++ EM+++G P V
Sbjct: 589 LNEAFRFHDEMLQRGFAPDDV 609
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 44/320 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT L++G+C+ + A + EM+E+G +V+ YN +LNG+C+
Sbjct: 290 VPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCK--------- 340
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK + +A+K+FDEM RG PD +F+ ++H + + +L M ++ I P +
Sbjct: 341 -EKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIV 399
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C G +E A EL M+ + P+ TY Y + A +L+ M
Sbjct: 400 AYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM 459
Query: 181 KEDDL----------------------------------CVPNIHTYNILIGMFMALNRM 206
E + P+ +YN LI F+ + M
Sbjct: 460 IEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNM 519
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D N ++ L D+ +Y ++++G C + + +EA +MIEKG+ P + T+ L
Sbjct: 520 DKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTAL 579
Query: 267 YRGLIQSDMLRTWRRLKKKL 286
G + D L R ++
Sbjct: 580 INGHVTQDNLNEAFRFHDEM 599
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 143/288 (49%), Gaps = 11/288 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ ++ SL+ G KI+ +++A E++ G+E NV T N+++N +C+ +
Sbjct: 80 LVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKS 139
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F EM GI D+ +++ ++ Y R + + + +N M +KG+ P++
Sbjct: 140 F----------LSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLF 189
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC GR A+ +L EM+ G+SP TYN E R + + A +++ +M
Sbjct: 190 TYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEM 249
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ VP++ +++ LI +F +D + +K L D YT+L+HG C
Sbjct: 250 LRQGV-VPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGN 308
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
EA + EM+E+G + + + T+ GL + ML +L ++ E
Sbjct: 309 MLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE 356
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 135/307 (43%), Gaps = 46/307 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++I G CK R A+ L EM+ G+ P+ TYN LL CRR +
Sbjct: 186 PSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSE---- 241
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP---- 117
A+++F EM +G+ PD+ SFS ++ V+SR +L MK+ G+ P
Sbjct: 242 ------AKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVI 295
Query: 118 -------------------------------TVATYTSVVKCLCSCGRIEDAEELLGEMV 146
V Y +++ LC + DA++L EMV
Sbjct: 296 YTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMV 355
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G P T+ + + A+ L+ M + ++ P+I YN LI F + M
Sbjct: 356 ERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI-KPDIVAYNTLIDGFCKVGEM 414
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ E+W+ + ++ + +Y +LI+ C EA + + MIEKG+ P VT T+
Sbjct: 415 EKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTV 474
Query: 267 YRGLIQS 273
+G +S
Sbjct: 475 IKGYCRS 481
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 110/266 (41%), Gaps = 11/266 (4%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE------- 62
+++ + + R+ A+ + MI R V L++ +C + N F+
Sbjct: 1 MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTN-NLVFDLLIRTYV 59
Query: 63 --KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +R + F +R +G + + + +L + +L+ + + GI V
Sbjct: 60 QARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVY 119
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +V LC G+ +D + L EM NG+ TYN Y A ++ M
Sbjct: 120 TLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSM 179
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L P++ TYN +I R + I + L D +Y L+ C +
Sbjct: 180 ADKGL-KPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDN 238
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
+ EA + F EM+ +G++P V+F +L
Sbjct: 239 FSEAKEIFGEMLRQGVVPDLVSFSSL 264
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 23/280 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y++LI G C I R+D A L +M++R +P VVT N L++G+C+
Sbjct: 504 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR------ 557
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I+ A +V D M G PDV +++ ++H + RA + + + + L+ M +G+ P V
Sbjct: 558 ----IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 613
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT++V LC R+ +A + +M +G +P+ TY + +G +KL+ +M
Sbjct: 614 TYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM 673
Query: 181 KEDDLCV---PNIHTYNILIGMFMALNR----MDMVREIWNHVKGSELGLDLDSYTMLIH 233
+C P+ Y L R ++++RE ++ G ++ Y +
Sbjct: 674 ----VCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV--YRFAVD 727
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
GL E K + A + +M+ G LP +L GL +S
Sbjct: 728 GLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKS 767
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 129/284 (45%), Gaps = 20/284 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YTSLI+G C N D A +M RG P+ VTYNV+++ C+R L
Sbjct: 356 PSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE----- 410
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +M G PDV +++ V+ ++ + + +L N M+ G P +
Sbjct: 411 -----EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRS 465
Query: 122 YTSVVKCLC-------SC--GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
+ +++ LC +C G++++A LL M +G P TY+ +
Sbjct: 466 HNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 525
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A L M + C P + T N LI R+ RE+ + + S D+ +Y L+
Sbjct: 526 ARHLLEDMVKRQ-CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 584
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
HG C + + A + +M+ +GL P VT+ L GL +++ L
Sbjct: 585 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 628
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 24/292 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI G K +++ A +++ GV P+ V Y L++G+C
Sbjct: 321 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLC----------M 370
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A ++F +M RG P ++++++ + + + D + M E G P V T
Sbjct: 371 ANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 430
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-----------RGRKDA 170
Y +V+ LC R+E+A L EM R G +P+ ++N RG+ D
Sbjct: 431 YNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDE 490
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
A +L ++M DD VP++ TY+ LI ++ R+D R + + + + +
Sbjct: 491 --AFRLLKRMT-DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 547
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
LIHGLC+ + KEA + M+ G P VT+ TL G ++ R L
Sbjct: 548 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 599
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 4/283 (1%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +++ G CK +R++ A EM G PN ++N ++ G+C+++ + +
Sbjct: 425 VPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQ 484
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K + A ++ M G PDV ++S ++ + + L M ++ PTV
Sbjct: 485 RGK-LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 543
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +++ LC GRI++A E+L MV +G SP TYN + A +L M
Sbjct: 544 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 603
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L PN+ TY L+ NR+ ++ +K S +L +YT LI G C +
Sbjct: 604 VARGL-APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 662
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
+ F EM+ G+ P V + TL L +S R+ R L+
Sbjct: 663 VDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG--RSARALE 703
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 26/284 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGE------MIERGVEPNVVTYNVLLNGVCRRASL 55
P+ Y +++ G CK R++ A R G+ P++ YN+++ G+C+
Sbjct: 245 PDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQ---- 300
Query: 56 HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
N+R ++ + ++F++M R + PD S+ I++ ++A K + + + G+
Sbjct: 301 --NDRIDEAV----QMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGV 354
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P+ YTS++ LC +DA EL +M R G PS TYN R A
Sbjct: 355 TPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACD 414
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
L ++M ED VP++ TYN ++ +R++ ++N ++ + S+ +I GL
Sbjct: 415 LIKKMIEDGH-VPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGL 473
Query: 236 CEKQKWKEACQ---------YFVEMIEKGLLPQKVTFETLYRGL 270
C++ K +ACQ M + G +P VT+ TL GL
Sbjct: 474 CQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 517
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 134/297 (45%), Gaps = 24/297 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+++ G CK ++D AE + EM R + P T + L + +C R S+
Sbjct: 77 PDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSM------ 130
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ F + + + + ++++IV+ +A + +L+ M EK I +
Sbjct: 131 -------ERAFQLLEIMPV-ANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGS 182
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
SV+ L GRI++A ++ E R P T N + + R + A +L R M
Sbjct: 183 LDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKARELLRAMP 239
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMV------REIWNHVKGSELGLDLDSYTMLIHGL 235
+++ C P+ +Y ++ R++ RE+ + S L Y ++I GL
Sbjct: 240 DEE-CAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGL 298
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
C+ + EA Q F +M E+ + P ++ L GL ++ L R L +KL +T
Sbjct: 299 CQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVT 355
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 107/261 (40%), Gaps = 21/261 (8%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR-VRGIEPDVTSFS 88
M ++G+ P + + ++ G C + FE A K+F M PDV ++
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWC-----NVGRTFE-----AVKIFSLMEECHSPYPDV--YN 48
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
+++ S+ + + + M ++G P T+T+++ LC G++++AE ++ EM
Sbjct: 49 VLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSR 108
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
+ P T + E R A +L M V N YNI++ R+D
Sbjct: 109 MIPPYFATSSFLAHELCLRGSMERAFQLLEIMP-----VANSSAYNIVVVALCKAARVDD 163
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
E+ + + L S ++ GL + + EA Q + E + P VT L
Sbjct: 164 ALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLLE 220
Query: 269 GLIQSDMLRTWRRLKKKLDEE 289
G + R L + + +E
Sbjct: 221 GFCSRGQVDKARELLRAMPDE 241
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 133/285 (46%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ G C R + + EM+ G PNVVT+N L+ +CR N F
Sbjct: 223 PDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCR------NGLF 276
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ +V +M G PD+ ++ VL + +++ + L+ M G+ P V
Sbjct: 277 ERV----HQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVC 332
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V+K LCS R E AEELL EM N T+N + ++L QM
Sbjct: 333 YNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQML 392
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E CVP++ TY +I F +D + + + SYT+++ GLC ++W
Sbjct: 393 EHG-CVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERW 451
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A +MIE+G P VTF T+ L + ++ L K++
Sbjct: 452 VDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQM 496
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 133/320 (41%), Gaps = 46/320 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEM------------------------------- 30
PNV Y +++ G C R + AE L EM
Sbjct: 328 PNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIEL 387
Query: 31 ----IERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTS 86
+E G P+V+TY ++NG C+ E I A + M G P+ S
Sbjct: 388 LEQMLEHGCVPDVITYTTVINGFCK----------EGLIDEAVMLLKSMAACGCRPNTIS 437
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
++IVL A + + D ++ M E+G P T+ +V+ LC G +E A ELL +M+
Sbjct: 438 YTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQML 497
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
NG SP +Y+ + A++L M + PN Y+ + R+
Sbjct: 498 LNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM-SPNTIIYSSIASALSKEGRI 556
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ V +++++++ + D Y +I LC++ A ++ M+ G +P + T+ L
Sbjct: 557 NRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTIL 616
Query: 267 YRGLIQSDMLRTWRRLKKKL 286
RGL ++ + + +L
Sbjct: 617 IRGLASEGFVKEAQEMLTEL 636
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 11/257 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT++I G+CK ID A L M G PN ++Y ++L G+C ER
Sbjct: 397 VPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSA------ER 450
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +AE + +M +G P+ +F+ V++ + + +++ L M G P +
Sbjct: 451 WV----DAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLI 506
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y++V+ L G+ ++A ELL MV G+SP+ Y+ N ++++ +
Sbjct: 507 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNI 566
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+D + YN +I D E ++ S + +YT+LI GL +
Sbjct: 567 -QDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGF 625
Query: 241 WKEACQYFVEMIEKGLL 257
KEA + E+ KG L
Sbjct: 626 VKEAQEMLTELCSKGAL 642
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 126/296 (42%), Gaps = 17/296 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ C RI A L EM RG P Y+V+L C R
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGG------- 165
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH-VYSRAHKPQLSLDKLNFMKEKGIC-PTV 119
R+A +V ++ RG DV + ++VL+ V + +L L + C P V
Sbjct: 166 GGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDV 225
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+Y +V+K LC R ++L+ EMVR G P+ T+N G NG + Q
Sbjct: 226 VSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLI----GYLCRNGLFERVHQ 281
Query: 180 MKE---DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+ D C P+I Y ++ +++ EI + + L ++ Y ++ GLC
Sbjct: 282 VLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLC 341
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKKKLDEESI 291
++W++A + EM + VTF L Q+ ++ R L++ L+ +
Sbjct: 342 SAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCV 397
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 131/271 (48%), Gaps = 12/271 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ NV + +++ CK +ID A L +M RG+ PNVV+YN ++ CR+
Sbjct: 439 LANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRK-------- 490
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K + A VF M +G++P+ ++SI++ + H Q L+ +N M I
Sbjct: 491 --KNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGV 548
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNG-VSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++ LC G+ A ELL M+ S +YN + + + A+ Y +
Sbjct: 549 VYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEE 608
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + + PN+ TY L+ NRMD E+ + +K + LD+ +Y LIHG C+K
Sbjct: 609 MCANGIS-PNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKS 667
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ A F E++E+GL P + + +L G
Sbjct: 668 NMESASALFSELLEEGLNPSQPVYNSLISGF 698
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 142/298 (47%), Gaps = 15/298 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIE-RGVEPNVVTYNVLLNGVCRRASLHPNERF 61
N +Y ++I G CK+ + A L MIE + + ++YN +++G +
Sbjct: 546 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIK---------- 595
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A ++EM GI P+V +++ ++ + ++ +L+ + MK KG+ +
Sbjct: 596 EGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPA 655
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +E A L E++ G++PS YN +R + A+ LY++M
Sbjct: 656 YGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKML 715
Query: 182 EDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+D L C ++ TY LI + + + +++ ++ L D YT++++GL +K +
Sbjct: 716 KDGLRC--DLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQ 773
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK-LDEESITFGSEF 297
+ + + F EM + + P + + + G + L RL + LD+ + G+ F
Sbjct: 774 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 831
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 16/254 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV TSLI G CK N + A +M G PN VT++VL+ ERF
Sbjct: 337 NVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLI------------ERFS 384
Query: 63 KT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K + A + + +M G+ P V ++ + + K + +L + E G+ V
Sbjct: 385 KNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVF 443
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+++ LC G+I+ A ELL +M G+ P+ +YN + +K+ + A ++ M
Sbjct: 444 ICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNM 503
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E L PN +TY+ILI + V E+ N + S + ++ Y +I+GLC+ +
Sbjct: 504 LEKGL-KPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQ 562
Query: 241 WKEACQYFVEMIEK 254
+A + MIE+
Sbjct: 563 TSKARELLANMIEE 576
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 114/268 (42%), Gaps = 46/268 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YTSL+ G CK NR+D A EM +GV+ ++ Y L++G C+++++
Sbjct: 616 PNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNME----- 670
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A +F E+ G+ P ++ ++ + +LD M + G+ + T
Sbjct: 671 -----SASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT 725
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ L G + A +L EM G+ P Y + +K++ +MK
Sbjct: 726 YTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMK 785
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++++ PN+ YN +I H + L
Sbjct: 786 KNNV-TPNVLIYNAVIA---------------GHYREGNL-------------------- 809
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA + EM++KG+LP TF+ L G
Sbjct: 810 DEAFRLHDEMLDKGILPDGATFDILVSG 837
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 119/290 (41%), Gaps = 47/290 (16%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + + L+ + K + D A + +M+E GV P V N L+ + +R S
Sbjct: 161 NSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNS-------- 212
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLD----------------- 105
I A++++ M G++ D + +++ R KP +L+
Sbjct: 213 --ITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLY 270
Query: 106 ---------KLNF---------MKEKGIC-PTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
LN MKEK +C P+ TYTSV+ G +EDA EMV
Sbjct: 271 SLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMV 330
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+G+S + + D A+ L+ +M E++ PN T+++LI F M
Sbjct: 331 SDGISMNVVAATSLITGHCKNNDLGSALDLFYKM-ENEGPSPNSVTFSVLIERFSKNGEM 389
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
+ E + ++ L + +I G + QK +EA + F E E GL
Sbjct: 390 EKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL 439
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 105/259 (40%), Gaps = 39/259 (15%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+ D ++ G E + +F+ +L+ YS+ + ++D +N M E G+ P V + L
Sbjct: 149 LVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALV 208
Query: 131 SCGRIEDAEELLGEMVRNGVSPS-----------------AETYNCFFKEY-RGR----- 167
I +A+EL MV GV AE F + RG
Sbjct: 209 QRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSL 268
Query: 168 ----------KDANGAM--KLYRQMKEDDLCVPNIHTY-NILIGMFMALNRMDMVREIW- 213
K N AM L R+MKE LCVP+ TY ++++ N D +R W
Sbjct: 269 LYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIR--WK 326
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + + +++ + T LI G C+ A F +M +G P VTF L ++
Sbjct: 327 DEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKN 386
Query: 274 DMLRTWRRLKKKLDEESIT 292
+ KK++ +T
Sbjct: 387 GEMEKALEFYKKMESLGLT 405
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ MYT ++ G K + + EM + V PNV+ YN ++ G R +L +E
Sbjct: 755 VPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNL--DEA 812
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
F ++ DEM +GI PD +F I++
Sbjct: 813 F--------RLHDEMLDKGILPDGATFDILV 835
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 151/325 (46%), Gaps = 49/325 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +Y ++I G CKI ++ A M GV + VTYN L+ G+C
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS----- 226
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ +M +R I P+V +F+ V+ V+ + K ++ M + + P V T
Sbjct: 227 -----DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR+++A+++L MV G P TYN + K + KL+R+M
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWN--------------------------- 214
+ L V + TYN +I + R D +EI++
Sbjct: 342 QRGL-VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKA 400
Query: 215 -----HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+++ SE+ LD+ +Y ++IHG+C+ ++A F + KGL P V++ T+ G
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Query: 270 LIQSDMLRTWRR---LKKKLDEESI 291
+ R W + L +K+ E+ +
Sbjct: 461 FCRK---RQWDKSDLLYRKMQEDGL 482
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 146/305 (47%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ ++ ++ K D+ M G+ ++ +YN+++N +CR + R
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS------R 119
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F A V +M G EPDV + S +++ + + ++ ++D ++ M+E G P V
Sbjct: 120 FVI----ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C G + DA EL M R+GV A TYN + A +L R M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D+ VPN+ T+ +I +F+ + +++ + + D+ +Y LI+GLC +
Sbjct: 236 VMRDI-VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFGS 295
EA Q M+ KG LP VT+ TL G +S + +L +++ + ++IT+ +
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 296 EFQNY 300
Q Y
Sbjct: 355 IIQGY 359
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 139/282 (49%), Gaps = 15/282 (5%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIE-RGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRN 67
++I + K + D A M E G +P + +YN LLN A + N+ E
Sbjct: 83 TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLN-----ALIESNKWDE----- 132
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
AE F G+ P++ +++I++ + R + + + LN+M E+G P V +Y +++
Sbjct: 133 AESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLIN 192
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
L G + DA +L EM GV+P YN + + D A +++ ++ +
Sbjct: 193 SLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVY 252
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
PNI +YN++I + D EIW+ +K +E G DL +Y+ LIHGLC A +
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 312
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK 285
+ EM E G+ P V + T+ G +++ + L W+ ++K+
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 354
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 129/270 (47%), Gaps = 11/270 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+S+I G C+ R+D L +M + G +PN N ++NG R + L RF
Sbjct: 432 YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRF----- 486
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
F M +G P V +++ +++ S+A + + + M KG P + TY+ ++
Sbjct: 487 -----FGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLM 541
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC +++ A L + + G P + +N A++LY +MK+ C
Sbjct: 542 NGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK-C 600
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VPN+ T+N L+ F + + +IW+H+ D+ SY + + GLC + +A
Sbjct: 601 VPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVG 660
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + +++G+LP +T+ L R ++ + L
Sbjct: 661 FLNDAVDRGVLPTAITWNILVRAVLDNGAL 690
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 40/307 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
P ++ Y SL+ + N+ D AE F G+ PN+ TYN+L+ CR+
Sbjct: 112 PGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKEL 171
Query: 53 ------ASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P+ T+ N A K+FDEM RG+ PDV ++I++ + +
Sbjct: 172 LNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFK 231
Query: 97 AHKPQLSLDKLN-------FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
D LN +K + P + +Y ++ LC CG+ +++ E+ M +N
Sbjct: 232 KG------DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
TY+ G + +GA ++Y++M E+ + P++ YN ++ ++ R++
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS-PDVVVYNTMLNGYLRAGRIEEC 344
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
E+W V E + SY +LI GL E K EA + + EK +T+ L G
Sbjct: 345 LELWK-VMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHG 403
Query: 270 LIQSDML 276
L ++ L
Sbjct: 404 LCKNGYL 410
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 130/309 (42%), Gaps = 33/309 (10%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------------- 51
Y++LI+G C +D A R EM E GV P+VV YN +LNG R
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352
Query: 52 ----RASLHPNERFEKTIRNAEKVFDEMRVRGIEP------DVTSFSIVLHVYSRAHKPQ 101
R + N NA KV + + + + P D ++ +++H +
Sbjct: 353 KEGCRTVVSYNILIRGLFENA-KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN 411
Query: 102 LSLDKLNFMKE-KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
+L L + +G T A Y+S++ LC GR+++ +L +M ++G P+ N
Sbjct: 412 KALSILEEAENGRGDLDTFA-YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAV 470
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
+ A++ + M C P + TYN LI R + +
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKG-CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKG 529
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DML 276
++ +Y++L++GLC+ +K A + + +EKG P + GL S D L
Sbjct: 530 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 589
Query: 277 RTWRRLKKK 285
+ + +K++
Sbjct: 590 QLYSEMKQR 598
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 14/284 (4%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
V Y LI G + ++D A + E+ + +TY VL++G+C+ L+
Sbjct: 359 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN------- 411
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
A + +E + D ++S +++ R + L+ M + G P
Sbjct: 412 ---KALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCN 468
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
+V+ ++EDA G MV G P+ TYN + + A L ++M
Sbjct: 469 AVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK 528
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
PN+ TY++L+ ++DM +W D+ + ++IHGLC K ++
Sbjct: 529 GW-KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
A Q + EM ++ +P VT TL G + +R + R K D
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEGFYK---VRDFERASKIWD 628
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y+ L+ G C+ ++DMA + +E+G +P+V +N++++G+C
Sbjct: 532 PNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK------- 584
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A +++ EM+ R P++ + + ++ + + + + + + + G P + +
Sbjct: 585 ---VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIIS 641
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
Y +K LCSC RI DA L + V GV P+A T+N +
Sbjct: 642 YNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVR 682
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+VKM+ +I+G C +++ A + EM +R PN+VT+N L+ G + F
Sbjct: 567 PDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG------FYKVRDF 620
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A K++D + G +PD+ S++I L H+ ++ LN ++G+ PT T
Sbjct: 621 ER----ASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAIT 676
Query: 122 YTSVVKCLCSCGRI 135
+ +V+ + G +
Sbjct: 677 WNILVRAVLDNGAL 690
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
K Y + A+ ++++M E C P I +YN L+ + N+ D + + +
Sbjct: 85 IKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMG 144
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR 280
L +L +Y +LI C K+++ +A + M E+G P ++ TL L ++ +
Sbjct: 145 LSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDAL 204
Query: 281 RLKKKLDEESIT 292
+L ++ E +T
Sbjct: 205 KLFDEMPERGVT 216
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ + +L+ G+ K+ + A + +++ G +P++++YN+ L G+C S H
Sbjct: 601 VPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLC---SCH---- 653
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
I +A ++ RG+ P +++I++
Sbjct: 654 ---RISDAVGFLNDAVDRGVLPTAITWNILV 681
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +L+ G CKI A + M+ G++P++ TYN L++G+C+
Sbjct: 306 PDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGE------- 358
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A K+ D+M R P+ +++ ++ + ++ + + + KGI P V T
Sbjct: 359 ---IEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCT 415
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S+++ LC + A +L EM G P TYN + A+ L ++M
Sbjct: 416 FNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM- 474
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + C N+ YN LI F R++ EI++ ++ + D +Y LI GLC+ ++
Sbjct: 475 ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRV 534
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
++A Q +MI +GL P K T+ +L
Sbjct: 535 EDAAQLMDQMIMEGLRPDKFTYNSL 559
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 139/282 (49%), Gaps = 11/282 (3%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI G+CK RID A F+ E + G P+ TYN L+NG+C+ ++A
Sbjct: 279 LINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGH----------AKHAM 328
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+V D M + G++PD+ +++ ++ + + + ++ L+ M + P TY +++ L
Sbjct: 329 EVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSL 388
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C R+++A E+ + G+ P T+N + + AM L+ +MK C P+
Sbjct: 389 CKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKG-CRPD 447
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
TYN+LI + +++ + ++ + ++ Y LI G C+ ++ +EA + F
Sbjct: 448 EFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFD 507
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM +G+ VT+ TL GL +S + +L ++ E +
Sbjct: 508 EMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGL 549
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SLI G CK+ I+ A + L +M+ R PN VTYN +++ +C+
Sbjct: 341 PDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCK---------- 390
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A ++ + +GI PDV +F+ ++ + + ++D MK KG P T
Sbjct: 391 ENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFT 450
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LCS ++E+A LL EM NG + + YN + K A +++ +M+
Sbjct: 451 YNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEME 510
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ TYN LI R++ ++ + + L D +Y L+ C+
Sbjct: 511 LQGVSRDSV-TYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDI 569
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
K+A M G P VT+ TL GL ++ ++ RL + +
Sbjct: 570 KKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSI 614
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 13/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+++ G+ + +D A R +M+E G VT NVL+NG C++
Sbjct: 236 PDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGR------- 288
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A E G PD +++ +++ + + +++ ++ M G+ P + T
Sbjct: 289 ---IDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYT 345
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC G IE+A ++L +MV SP+A TYN + A ++ R +
Sbjct: 346 YNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLT 405
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P++ T+N LI G+ ++ N + +++ +KG D +Y MLI LC +K
Sbjct: 406 SKGI-LPDVCTFNSLIQGLCLSSNHKSAM-DLFEEMKGKGCRPDEFTYNMLIDSLCSSRK 463
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+EA EM G V + TL G ++
Sbjct: 464 LEEALNLLKEMELNGCARNVVIYNTLIDGFCKN 496
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 130/297 (43%), Gaps = 53/297 (17%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV +Y +LI G+CK RI+ AE EM +GV + VTYN L++G+C+
Sbjct: 482 NVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCK----------S 531
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + +A ++ D+M + G+ PD +++ +L + + + + D + M G P + TY
Sbjct: 532 KRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTY 591
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC GR++ A LL + G+ + YN + R + AM+L+
Sbjct: 592 ATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLF----- 646
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ-KW 241
RE+ + + D +Y ++ GLC
Sbjct: 647 ---------------------------REMLDKSEPP----DAITYKIVYRGLCNGGGPI 675
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL------KKKLDEESIT 292
EA + VEMIE+G +P+ +F L GL M T +L K K E I+
Sbjct: 676 GEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREIS 732
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 10/270 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +Y ++ K + R L EM G E + + + + S E
Sbjct: 94 VPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVE------SYGKFEL 147
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+++ + + + DE R++ PD ++++L+V A+K +L + M + I V+
Sbjct: 148 YDEVVGIVKVMEDEYRIK---PDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVS 204
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++K LC ++ A ++ EM G+SP T+ + Y + +GA+++ QM
Sbjct: 205 TFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQM 264
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E ++ T N+LI F R+D D +Y L++GLC+
Sbjct: 265 VEYGCPCTDV-TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGH 323
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
K A + M+ GL P T+ +L GL
Sbjct: 324 AKHAMEVVDAMLLGGLDPDIYTYNSLISGL 353
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 83/178 (46%)
Query: 111 KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
K+ P+ + Y +++ L G E +L EM +G + F + Y +
Sbjct: 89 KQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELY 148
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
+ + + + M+++ P+ YN+L+ + + N++ +V + + + D+ ++ +
Sbjct: 149 DEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNI 208
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
LI LC+ + + A EM GL P + TF T+ +G I+ L R+K+++ E
Sbjct: 209 LIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVE 266
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 135/270 (50%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ +YT +I G+C+ + A R EM+ G P+VVTYN LLNG+C+
Sbjct: 331 MPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCK--------- 381
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ + +AE++ +EM+ RG+ PD+ +F+ ++H Y R + +L + + ++ + P +
Sbjct: 382 -ERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIV 440
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ +C G + A EL +M + P+ TY+ + + + A +M
Sbjct: 441 TYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM 500
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ VPNI TYN +I + + ++ ++ ++ DL +Y LIHG ++ K
Sbjct: 501 VNKGI-VPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGK 559
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA M + + P VT+ + G
Sbjct: 560 MHEAFNLLKIMENENVQPDAVTYNMIISGF 589
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 141/290 (48%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ + LI G+C+ ++ A RF EM R V P+VV+++ L+ RR +
Sbjct: 262 PDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMD----- 316
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A + EMR G+ PD +++V+ + RA +L + M G P V T
Sbjct: 317 -----HAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVT 371
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC R+ DAEELL EM GV P T+ Y + A++ + +
Sbjct: 372 YNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTIS 431
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L P+I TYN LI + E+W+ + E+ + +Y++LI CEK +
Sbjct: 432 DQRL-RPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQV 490
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + EM+ KG++P +T+ ++ +G +S + ++ K+ + +
Sbjct: 491 DNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV 540
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 133/286 (46%), Gaps = 30/286 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +L+ G CK R+ AE L EM ERGV P++ T+ L++G CR ++ +
Sbjct: 366 LPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQ 425
Query: 61 FEKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
F TI + A +++D+M R I P+ ++SI++ +
Sbjct: 426 FFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHC 485
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + L+ M KGI P + TY S++K C G + ++ L +M + V P
Sbjct: 486 EKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLI 545
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN Y + A L + M+ +++ P+ TYN++I F M W +
Sbjct: 546 TYNTLIHGYVKEGKMHEAFNLLKIMENENV-QPDAVTYNMIISGFSVHGNMQEAD--WVY 602
Query: 216 VKGSELGLDLDSYT--MLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
K G++ D YT +I+G K++ Q EM++KGL P
Sbjct: 603 KKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 135/275 (49%), Gaps = 12/275 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + ++ + ++ A + M+ +G++P +VTYN +L G+ R N R+
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLR------NGRW 245
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K A +VF M G+ PDV SF++++ + RA + + +L M+ + + P V +
Sbjct: 246 DK----AREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVS 301
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ ++ G ++ A E L EM G+ P Y + A+++ +M
Sbjct: 302 FSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMV 361
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C+P++ TYN L+ R+ E+ N +K + DL ++T LIHG C
Sbjct: 362 AFG-CLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNI 420
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLI-QSDM 275
++A Q+F + ++ L P VT+ TL G+ Q D+
Sbjct: 421 EKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDL 455
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 15/258 (5%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E N T N++++ C+ +L E + V EM R + PDV + ++++
Sbjct: 156 EVNTYTLNIMVHSYCK--TLQFGE--------VDTVISEMEKRCVFPDVVTHNVMVDARF 205
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
RA + ++ ++ M KGI P + TY SV+K L GR + A E+ M GV+P
Sbjct: 206 RAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVR 265
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
++N + + A++ Y++M+ + P++ +++ LIG+F MD E
Sbjct: 266 SFNMLIGGFCRAGELEEALRFYKEMRGRRV-TPDVVSFSCLIGLFTRRGEMDHAAEYLRE 324
Query: 216 VKGSELGLDLDS--YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ E GL D YTM+I G C EA + EM+ G LP VT+ TL GL +
Sbjct: 325 MR--EFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKE 382
Query: 274 DMLRTWRRLKKKLDEESI 291
L L ++ E +
Sbjct: 383 RRLSDAEELLNEMKERGV 400
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 96/236 (40%), Gaps = 44/236 (18%)
Query: 96 RAHKPQLSLDK--------------------------LNF---------MKEKGICPTVA 120
RA P L+ D L F M+++ + P V
Sbjct: 136 RAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV 195
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ +V G +E A L+ MV G+ P TYN K + A +++R M
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255
Query: 181 KEDDLC--VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
D C P++ ++N+LIG F ++ + ++G + D+ S++ LI +
Sbjct: 256 ---DACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRR 312
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
+ A +Y EM E GL+P V + + G ++ ++ R++ +E + FG
Sbjct: 313 GEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVR----DEMVAFG 364
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 139/282 (49%), Gaps = 15/282 (5%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIE-RGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRN 67
++I + K + D A M E G +P + +YN LLN A + N+ E
Sbjct: 83 TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLN-----ALIESNKWDE----- 132
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
AE F G+ P++ +++I++ + R + + + LN+M E+G P V +Y +++
Sbjct: 133 AESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLIN 192
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
L G + DA +L EM GV+P YN + + D A +++ ++ +
Sbjct: 193 SLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVY 252
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
PNI +YN++I + D EIW+ +K +E G DL +Y+ LIHGLC A +
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 312
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK 285
+ EM E G+ P V + T+ G +++ + L W+ ++K+
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 354
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 40/307 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
P ++ Y SL+ + N+ D AE F G+ PN+ TYN+L+ CR+
Sbjct: 112 PGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKEL 171
Query: 53 ------ASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P+ T+ N A K+FDEM RG+ PDV ++I++ + +
Sbjct: 172 LNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFK 231
Query: 97 AHKPQLSLDKLN-------FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
D LN +K + P + +Y ++ LC CG+ +++ E+ M +N
Sbjct: 232 KG------DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
TY+ G + +GA ++Y++M E+ + P++ YN ++ ++ R++
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS-PDVVVYNTMLNGYLRAGRIEEC 344
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
E+W V E + SY +LI GL E K EA + + EK +T+ L G
Sbjct: 345 LELWK-VMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHG 403
Query: 270 LIQSDML 276
L ++ L
Sbjct: 404 LCKNGYL 410
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+S+I G C+ R+D L +M + G +PN N ++NG R + L RF
Sbjct: 432 YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRF----- 486
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
F M +G P V +++ +++ S+A + + + M KG P + TY+ ++
Sbjct: 487 -----FGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLM 541
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC +++ A L + + G P + +N A++LY +MK+ C
Sbjct: 542 NGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK-C 600
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHV 216
VPN+ T+N L+ F + + +IW+H+
Sbjct: 601 VPNLVTHNTLMEGFYKVRDFERASKIWDHI 630
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 130/309 (42%), Gaps = 33/309 (10%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------------- 51
Y++LI+G C +D A R EM E GV P+VV YN +LNG R
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352
Query: 52 ----RASLHPNERFEKTIRNAEKVFDEMRVRGIEP------DVTSFSIVLHVYSRAHKPQ 101
R + N NA KV + + + + P D ++ +++H +
Sbjct: 353 KEGCRTVVSYNILIRGLFENA-KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN 411
Query: 102 LSLDKLNFMKE-KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
+L L + +G T A Y+S++ LC GR+++ +L +M ++G P+ N
Sbjct: 412 KALSILEEAENGRGDLDTFA-YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAV 470
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
+ A++ + M C P + TYN LI R + +
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKG-CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKG 529
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DML 276
++ +Y++L++GLC+ +K A + + +EKG P + GL S D L
Sbjct: 530 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 589
Query: 277 RTWRRLKKK 285
+ + +K++
Sbjct: 590 QLYSEMKQR 598
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + ++I G+ + ++++ A RF G M+ +G P VVTYN L+NG+ + ERF
Sbjct: 462 PNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA------ERF 515
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + EM +G +P++ ++S++++ + K ++L+ EKG P V
Sbjct: 516 SE----AYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKM 571
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ ++ LCS G++EDA +L EM + P+ T+N + + +D A K++ +
Sbjct: 572 HNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 14/284 (4%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
V Y LI G + ++D A + E+ + +TY VL++G+C+ L+
Sbjct: 359 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN------- 411
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
A + +E + D ++S +++ R + L+ M + G P
Sbjct: 412 ---KALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCN 468
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
+V+ ++EDA G MV G P+ TYN + + A L ++M
Sbjct: 469 AVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK 528
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
PN+ TY++L+ ++DM +W D+ + ++IHGLC K ++
Sbjct: 529 GW-KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
A Q + EM ++ +P VT TL G + +R + R K D
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEGFYK---VRDFERASKIWD 628
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P V Y +LI G K R A + EM+ +G +PN++TY++L+NG+C+
Sbjct: 496 FPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG-------- 547
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K + A ++ + +G +PDV +I++H + K + +L + MK++ P +
Sbjct: 548 --KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLV 605
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
T+ ++++ E A ++ +++ S + NC++ E+
Sbjct: 606 THNTLMEGFYKVRDFERASKIWDHILQ-----SWSSSNCYYMEH 644
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
K Y + A+ ++++M E C P I +YN L+ + N+ D + + +
Sbjct: 85 IKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMG 144
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR 280
L +L +Y +LI C K+++ +A + M E+G P ++ TL L ++ +
Sbjct: 145 LSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDAL 204
Query: 281 RLKKKLDEESIT 292
+L ++ E +T
Sbjct: 205 KLFDEMPERGVT 216
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 147/318 (46%), Gaps = 48/318 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN T+L+ G CK R+D A L M ++G + +VV Y L++G C +L
Sbjct: 212 PNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD----- 266
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+++FDEM +GI +V ++S ++H R + + + LN M E GI P V T
Sbjct: 267 -----RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVT 321
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF-------------FKEYR--- 165
YT ++ LC GR A +LL MV G PS TYN FK R
Sbjct: 322 YTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMI 381
Query: 166 --GRK-----------------DANGAMKLYRQMKEDDLCV-PNIHTYNILIGMFMALNR 205
G+K + A+KL+ M +++ C+ PN+ T+N+LIG R
Sbjct: 382 EKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGR 441
Query: 206 MDMVREIWNH-VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+ +I VK G +L +Y ML+ G + K KEA + + ++++ G +P T+
Sbjct: 442 LTKAVKIHRKMVKKGSCG-NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 500
Query: 265 TLYRGLIQSDMLRTWRRL 282
L G + ML + L
Sbjct: 501 ILIDGFCKMRMLNIAKGL 518
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 146/301 (48%), Gaps = 18/301 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT LI G CK R A L M+E+G EP+ VTYNVLL+G+C+
Sbjct: 317 PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK---------- 366
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC--PTV 119
E + +A K+ M +G + DV +++ ++ K +L N M + C P V
Sbjct: 367 EGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNV 426
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+ ++ LC GR+ A ++ +MV+ G + TYN AM+L++Q
Sbjct: 427 FTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQ 486
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ + VPN TY+ILI F + +++ + ++ ++ L L Y L+ LC++
Sbjct: 487 VLDLGF-VPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 545
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFG 294
++A F EM P ++F T+ G +++ + + L+ K+ E +++TF
Sbjct: 546 SLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFS 605
Query: 295 S 295
+
Sbjct: 606 T 606
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 11/276 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ ++LI + + + +G +++RG NV N++L G+CR +
Sbjct: 106 LPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGV----- 160
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
FE A + EM + + PD+ S++ +++ +A K + ++ L M+ G P
Sbjct: 161 FE-----AMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSV 215
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T T+++ LC GR+++A ELL M + G Y + + + +L+ +M
Sbjct: 216 TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 275
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ N+ TY+ L+ L + + N + + D+ +YT LI GLC+ +
Sbjct: 276 LGKGISA-NVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGR 334
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
A M+EKG P VT+ L GL + ++
Sbjct: 335 ATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLV 370
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 133/299 (44%), Gaps = 25/299 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV + ++ G C+ + A + EM + V P++V+YN L+NG+C+
Sbjct: 143 NVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCK----------A 192
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K ++ A + EM G P+ + + ++ + + +++ L MK+KG V Y
Sbjct: 193 KKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLY 252
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C+ G ++ +EL EM+ G+S + TY+C A + M E
Sbjct: 253 GTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAE 312
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCEKQK 240
+ P++ TY LI R ++ N + KG E +Y +L+ GLC++
Sbjct: 313 HGI-HPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEE--PSNVTYNVLLSGLCKEGL 369
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+A + MIEKG VT+ TL +GL K K+DE F S F N
Sbjct: 370 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCD----------KGKVDEALKLFNSMFDN 418
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 10/233 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y+ LI G+CK+ +++A+ EM G+ P + YN L+ +C+ SL
Sbjct: 493 VPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL----- 547
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A+ +F EM EPD+ SF+ ++ +A Q + M E G+ P
Sbjct: 548 -----EQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDAL 602
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+++++ L G +++A+ L MV +G +P A Y+ K + D + L QM
Sbjct: 603 TFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQM 662
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
+ IL + ++ +D++ + +G+ G + +L+
Sbjct: 663 AAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQ 715
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 129/272 (47%), Gaps = 17/272 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMI--ERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+V Y +L+ G C ++D A + M E +EPNV T+N+L+ G+C+
Sbjct: 388 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCK--------- 438
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A K+ +M +G ++ +++++L +A K + +++ + + G P
Sbjct: 439 -EGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSF 497
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+ ++ C + A+ L EM +G++P+ YN A L+++M
Sbjct: 498 TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 557
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEK 238
+ C P+I ++N +I + V+E+ +K E+GL D +++ LI+ L +
Sbjct: 558 GNAN-CEPDIISFNTMIDGTLKAGDFQFVKEL--QMKMVEMGLRPDALTFSTLINRLSKL 614
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ EA M+ G P + +++L +GL
Sbjct: 615 GELDEAKSALERMVASGFTPDALVYDSLLKGL 646
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 95/238 (39%), Gaps = 36/238 (15%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A V+ M + P S S ++ ++ A KPQL + + ++G V V+K
Sbjct: 93 AFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLK 152
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
LC G + +A L+ EM R VSP +YN K A+ L +M E C
Sbjct: 153 GLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM-EAAGCF 211
Query: 188 PNIHT-----------------------------------YNILIGMFMALNRMDMVREI 212
PN T Y LI F +D +E+
Sbjct: 212 PNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKEL 271
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ + G + ++ +Y+ L+HGLC +WKEA M E G+ P VT+ L GL
Sbjct: 272 FDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 329
>gi|259490098|ref|NP_001159276.1| uncharacterized protein LOC100304366 [Zea mays]
gi|223943161|gb|ACN25664.1| unknown [Zea mays]
gi|414590092|tpg|DAA40663.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
gi|414590093|tpg|DAA40664.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
Length = 535
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 14/262 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT++++ WC+ R+D AER EM + G+ PNV TY +++ + R
Sbjct: 238 PDVVLYTAVVHAWCRAGRLDEAERVFTEMQQSGIMPNVYTYTAVIDAMYRAGQ------- 290
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++ +M G P+ T+F+ ++ + +A + + L N M++ P V T
Sbjct: 291 ---VPRAQELLCQMIDSGCPPNTTTFNAIMRSHVKAGRSEQVLQVHNQMQQLRCEPDVIT 347
Query: 122 YTSVVKCLCSCGR--IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++ C G+ ++ A ++L +M P T+N F+ + A KLY +
Sbjct: 348 YNFLIETHCGKGQGNLDAALKVLDKMTAKKCVPDCHTFNPMFRLLLVLGNIGAAHKLYEK 407
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+E C PN+ TYN L+ +F MDMV + + + ++ +Y LI C +
Sbjct: 408 MRELQ-CKPNVVTYNCLLRLFNKEKSMDMVLRMKKDMDAEGIEPNMHTYAALIEAFCGRG 466
Query: 240 KWKEACQYFVEMI-EKGLLPQK 260
WK A EMI EK P K
Sbjct: 467 NWKRAHTTLKEMIEEKSFKPSK 488
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 4/226 (1%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A+ +FD R PDV ++ V+H + RA + + M++ GI P V TYT+V+
Sbjct: 225 AQALFDSCRTV-FTPDVVLYTAVVHAWCRAGRLDEAERVFTEMQQSGIMPNVYTYTAVID 283
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
+ G++ A+ELL +M+ +G P+ T+N + + + ++++ QM++ C
Sbjct: 284 AMYRAGQVPRAQELLCQMIDSGCPPNTTTFNAIMRSHVKAGRSEQVLQVHNQMQQLR-CE 342
Query: 188 PNIHTYNILIGMFMALNR--MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
P++ TYN LI + +D ++ + + + D ++ + L A
Sbjct: 343 PDVITYNFLIETHCGKGQGNLDAALKVLDKMTAKKCVPDCHTFNPMFRLLLVLGNIGAAH 402
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ + +M E P VT+ L R + + R+KK +D E I
Sbjct: 403 KLYEKMRELQCKPNVVTYNCLLRLFNKEKSMDMVLRMKKDMDAEGI 448
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + + + I A + +M E +PNVVTYN LL + S+ R
Sbjct: 379 VPDCHTFNPMFRLLLVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLRLFNKEKSMDMVLR 438
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY------SRAHKPQLSLDKLNFMKEKG 114
+K +M GIEP++ +++ ++ + RAH +L ++ ++EK
Sbjct: 439 MKK----------DMDAEGIEPNMHTYAALIEAFCGRGNWKRAHT---TLKEM--IEEKS 483
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
P+ V+ L G+++ EEL+ MV G
Sbjct: 484 FKPSKQVRDMVLVLLRKAGQLKKHEELVELMVDRG 518
>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 141/294 (47%), Gaps = 21/294 (7%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
+Y SLI G+C+ ID A+ + M G EP++VTYNVLLN C L E K
Sbjct: 220 SIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMK- 278
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK-----LNFMKEKGICPTV 119
+M G+EPDV S++ +L +A++ LDK +N M+ KG+C V
Sbjct: 279 ---------KMERSGVEPDVYSYNELLKGLCKANR----LDKAYMMMVNKMEAKGLCDVV 325
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+Y +++K LC+ + A +L EM G++P T+ K + +N A KL Q
Sbjct: 326 -SYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQ 384
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M L +P+ Y ++ +M M ++ + S + D+ SY LI+GLC
Sbjct: 385 MTGLGL-LPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRAS 443
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
+ EA + +M G P +VTF+ + GLI L R+ ++ E+ T
Sbjct: 444 RVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTL 497
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 13/226 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y L+ G CK NR+D A + +E +VV+YN ++ +C +
Sbjct: 287 PDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASH------- 339
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+F+EM +GI PDV +F+I++ + R ++ L+ M G+ P
Sbjct: 340 ---TKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVL 396
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++V LC G++ A + +MV +G++P +YN + AM LY M
Sbjct: 397 YTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMH 456
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS 227
C P+ T+ ++IG + ++ + +W+ + E G LD
Sbjct: 457 TGGPC-PDEVTFKLIIGGLIWEKKLSVACRVWDQMM--EKGFTLDG 499
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 129/290 (44%), Gaps = 11/290 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y+ I G CK+ + E+ L +M G P++ YN+ LN +C E
Sbjct: 78 NSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLC----------CE 127
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A V M +G EPD+ +++IV++ RA + +++ M KG P
Sbjct: 128 NQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKAC 187
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++V LC G+++ A EL +R + S YN + + A + M+
Sbjct: 188 RALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRR 247
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ C P++ TYN+L+ ++ + ++ S + D+ SY L+ GLC+ +
Sbjct: 248 NG-CEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLD 306
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A V +E L V++ T+ + L + + +L +++ + IT
Sbjct: 307 KAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGIT 356
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT+++ CK ++ MA +M+E G+ P+VV+YN L+NG+CR +
Sbjct: 391 LPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASR------ 444
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++++M G PD +F +++ K ++ + M EKG A
Sbjct: 445 ----VSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGA 500
Query: 121 TYTSVVKCLCS 131
++V + S
Sbjct: 501 VSETLVNAIHS 511
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 79/209 (37%), Gaps = 1/209 (0%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
I A K FDEM ++ + V R + L+ + M +G TY+
Sbjct: 25 IDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSR 84
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
+ LC E+LL +M R G P YN + + A+ + + M E
Sbjct: 85 FISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKG 144
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
P+I TY I+I R D EIW ++ D + L+ GLC K A
Sbjct: 145 R-EPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLA 203
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ V + + K + +L G Q+
Sbjct: 204 YELTVGAMRGRIKFSKSIYNSLINGFCQA 232
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 129/256 (50%), Gaps = 14/256 (5%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G EP + +YN LLN K E +F G+ P++ ++++++ +
Sbjct: 109 GCEPGIRSYNTLLNAFVE----------AKQWVKVESLFAYFETAGVAPNLQTYNVLIKM 158
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ + + + LN+M ++G P V +Y++V+ L G+++DA EL EM V+P
Sbjct: 159 SCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPD 218
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
YN + KD AM+L+ ++ ED PN+ T+NI+I R+D +IW
Sbjct: 219 VTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIW 278
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ- 272
+ +K +E DL +Y+ LIHGLC++ +A F E++E+ VT+ T+ G +
Sbjct: 279 DRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRC 338
Query: 273 ---SDMLRTWRRLKKK 285
+ L WR ++++
Sbjct: 339 GKIKESLELWRIMEQR 354
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 126/288 (43%), Gaps = 25/288 (8%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----RASLHPNERFE 62
Y+SLI+G C +D AE E++ER +VVTYN +L G CR + SL E
Sbjct: 293 YSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIME 352
Query: 63 K--------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQL 102
+ I A ++ M +G D T++ I +H
Sbjct: 353 QRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNK 412
Query: 103 SLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
+L + ++ KG V Y S++ CLC R+E+A L+ EM ++GV ++ N
Sbjct: 413 ALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Query: 163 EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222
+ A L R M ++ C+P + +YNILI + + + L
Sbjct: 473 GLIRDSRLSDASLLMRGMGKNG-CLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLK 531
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
DL +Y++L+ GLC +K + A + + + ++ GL P + L GL
Sbjct: 532 PDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGL 579
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 128/272 (47%), Gaps = 17/272 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ Y LI CK + A FL M + G +P+V +Y+ ++N + + L
Sbjct: 147 PNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLD----- 201
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY--SRAHKPQLSL-DKLNFMKEKGICPT 118
+A ++FDEM R + PDVT ++I++ + + HK + L DKL +++ + P
Sbjct: 202 -----DALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKL--LEDSSVYPN 254
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V T+ ++ L CGR++D ++ M +N TY+ + + A ++
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFN 314
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
++ E + ++ TYN ++G F ++ E+W + +++ SY +LI GL E
Sbjct: 315 ELVERKAFI-DVVTYNTMLGGFCRCGKIKESLELW-RIMEQRNSVNIVSYNILIKGLLEN 372
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
K EA + M KG T+ GL
Sbjct: 373 GKIDEATMIWRLMPAKGYAADNTTYGIFIHGL 404
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 11/273 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y S+I CK R++ A + EM + GVE N N L+ G+ R + L
Sbjct: 428 DVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL------- 480
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A + M G P V S++I++ A K + + M E G+ P + TY
Sbjct: 481 ---SDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTY 537
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ ++ LC +IE A EL + +++G+ P +N + AM + M+
Sbjct: 538 SILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ C N+ TYN L+ + + + IW ++ L D+ SY ++ GLC +
Sbjct: 598 RN-CTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVS 656
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
A ++F + G+ P T+ L R ++ M
Sbjct: 657 YAIEFFDDARNHGIFPTVYTWNILVRAVVNRKM 689
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 132/299 (44%), Gaps = 13/299 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I K ++D A EM ER V P+V YN+L++G +
Sbjct: 182 PDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLK---------- 231
Query: 62 EKTIRNAEKVFDE-MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK + A +++D+ + + P+V + +I++ S+ + L + MK+ +
Sbjct: 232 EKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLY 291
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+S++ LC G ++ AE + E+V TYN + +++L+R M
Sbjct: 292 TYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + NI +YNILI + ++D IW + D +Y + IHGLC
Sbjct: 352 EQRN--SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGY 409
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+A E+ KG + ++ L + L L K++ + + S N
Sbjct: 410 VNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCN 468
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V Y LI G C+ + A F+ EM+E G++P++ TY++LL G+CR
Sbjct: 496 LPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCR--------- 546
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ I A +++ + G+EPDV +I++H K ++ + M+ + +
Sbjct: 547 -DRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++++ A + G M + G+ P +YN K + A++ +
Sbjct: 606 TYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDA 665
Query: 181 KEDDLCVPNIHTYNILI 197
+ + P ++T+NIL+
Sbjct: 666 RNHGI-FPTVYTWNILV 681
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 1/145 (0%)
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G P +YN + K L+ + + PN+ TYN+LI M +
Sbjct: 109 GCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGV-APNLQTYNVLIKMSCKKKEFEK 167
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
R N + D+ SY+ +I+ L + K +A + F EM E+ + P + L
Sbjct: 168 ARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILID 227
Query: 269 GLIQSDMLRTWRRLKKKLDEESITF 293
G ++ + +L KL E+S +
Sbjct: 228 GFLKEKDHKMAMQLWDKLLEDSSVY 252
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 65/132 (49%)
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
K Y + A+ ++++M+E C P I +YN L+ F+ + V ++ + + +
Sbjct: 85 IKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAG 144
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR 280
+ +L +Y +LI C+K+++++A + M ++G P ++ T+ L ++ L
Sbjct: 145 VAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDAL 204
Query: 281 RLKKKLDEESIT 292
L ++ E +
Sbjct: 205 ELFDEMSERRVA 216
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G+CK+NRI+ A + L M RG P++VTYN+++ +C R L
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGL---- 190
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A KV D++ + P V +++I++ ++ L M +G+ P + T
Sbjct: 191 ------ALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYT 244
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ +C G +E A EL+ + G P +YN + + + + KL +M
Sbjct: 245 YNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMF 304
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN TY+ILI R+D + + EL D SY LI LC++ +
Sbjct: 305 SRG-CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRL 363
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
A MI G LP V + T+ L ++
Sbjct: 364 DLAIGIMDYMISNGCLPDIVNYNTILAALCKN 395
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 142/305 (46%), Gaps = 46/305 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y ++I G CK ++ A + + +G +P+V++YN+LL RA L+ +
Sbjct: 239 LPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILL-----RAFLNQGKW 293
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E EK+ EM RG EP+ ++SI++ R + ++ L M EK + P
Sbjct: 294 DE-----GEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTY 348
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y ++ LC GR++ A ++ M+ NG P YN +AN A++++ ++
Sbjct: 349 SYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 408
Query: 181 KEDDLCVPNIHTYNILI-------------GMFMA-------------------LNRMDM 208
+ C PN+ +YN +I GM A L R +
Sbjct: 409 RGMG-CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGL 467
Query: 209 VRE---IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
V E + + ++ S + SY +++ GLC+ ++ +A F EMIEKG P + T+
Sbjct: 468 VEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYIL 527
Query: 266 LYRGL 270
L G+
Sbjct: 528 LIEGI 532
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 133/279 (47%), Gaps = 20/279 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + T LI G+ I+ A R + E++E EP+V YN +++G C+
Sbjct: 101 PDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKV--------- 150
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A +V + M+ RG PD+ +++I++ K L+L L+ + PTV T
Sbjct: 151 -NRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVIT 209
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ G I +A +LL EM+ G+ P TYN + A +L +
Sbjct: 210 YTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLT 269
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMD----MVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
C P++ +YNIL+ F+ + D +V E+++ +G E + +Y++LI LC
Sbjct: 270 SKG-CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFS--RGCE--PNKVTYSILISSLCR 324
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ EA MIEK L P +++ L L + L
Sbjct: 325 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRL 363
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 12/256 (4%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
CK + + + FL ++ +G P+V+ L+ G K I A +V E
Sbjct: 79 CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNF----------KNIEKASRVM-E 127
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
+ EPDV +++ V+ + + ++ + + LN MK +G P + TY ++ LC+ +
Sbjct: 128 ILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 187
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+ A ++L +++ + P+ TY + N AMKL +M L +P+++TYN
Sbjct: 188 LGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGL-LPDMYTYN 246
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
+I ++ E+ + D+ SY +L+ + KW E + EM +
Sbjct: 247 AIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 306
Query: 255 GLLPQKVTFETLYRGL 270
G P KVT+ L L
Sbjct: 307 GCEPNKVTYSILISSL 322
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 10/149 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I A + MI +GV+P+ +TYN L++ +CR
Sbjct: 415 PNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCR---------- 464
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A + D+M G P V S++IVL + + ++ M EKG P T
Sbjct: 465 DGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETT 524
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
Y +++ + G +A EL + V
Sbjct: 525 YILLIEGIGFAGWRTEAMELANSLFSRDV 553
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 156/325 (48%), Gaps = 35/325 (10%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----------- 51
+V Y++LIYG+C ++ A L EM+ + + PNV TYN+L++ +C+
Sbjct: 233 DVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL 292
Query: 52 ----RASLHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+A + P+ T ++ A+ VF+ M + G+ PDV +++I+++ + +
Sbjct: 293 AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+L+ M +K + P + TY+S++ LC GRI +L+ EM G + TY
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITY 412
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
+ + A+ L+ +MK+ + PN T+ IL+ R+ +E++ +
Sbjct: 413 SSLIDGLCKNGHLDRAIALFNKMKDQGI-RPNTFTFTILLDGLCKGGRLKDAQEVFQDLL 471
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM-- 275
L++ +Y ++I G C++ +EA +M + G +P VTFE + L + D
Sbjct: 472 TKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENG 531
Query: 276 ------LRTWRRLK-KKLDEESITF 293
+ W ++ KK + SITF
Sbjct: 532 GNVGFDKKVWEIVEHKKGETPSITF 556
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CKI A + L ++ R +PNVV Y+ +++ +C+ + +
Sbjct: 167 YGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKY----------QLVS 216
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +F EM V+GI DV ++S +++ + K + ++ LN M K I P V TY +V
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G++++A+ +L M++ V P TY+ Y + A ++ M +
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV- 335
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++HTY ILI F +D ++ + + + +Y+ LI GLC+ +
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWD 395
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM ++G +T+ +L GL ++ L L K+ ++ I
Sbjct: 396 LIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGI 440
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 136/285 (47%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV MY+++I CK + A EM +G+ +VVTY+ L+ G C
Sbjct: 197 PNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFC----------I 246
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ A + +EM ++ I P+V +++I++ + K + + L M + + P V T
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ ++ A+ + M GV+P TY + K + A+ L+++M
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ VP I TY+ LI R+ V ++ + + ++ +Y+ LI GLC+
Sbjct: 367 QKNM-VPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHL 425
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A F +M ++G+ P TF L GL + L+ + + + L
Sbjct: 426 DRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 470
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 134/298 (44%), Gaps = 28/298 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ LI +C + +I L ++++RG P+ VT N L+ G+C + + F
Sbjct: 92 PDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHF 151
Query: 62 EKTI-------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ R A K+ ++ R +P+V +S ++ +
Sbjct: 152 HDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCK 211
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + M KGI V TY++++ C G++++A LL EMV ++P+ T
Sbjct: 212 YQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYT 271
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNH 215
YN A + M + CV P++ TY+ L+ + + + + ++N
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLK--ACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + D+ +YT+LI+G C+ + EA F EM +K ++P VT+ +L GL +S
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT LI G+CK +D A EM ++ + P +VTY+ L++G+C+
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR------- 389
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I + DEM RG +V ++S ++ + ++ N MK++GI P T
Sbjct: 390 ---IPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFT 446
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T ++ LC GR++DA+E+ +++ G + TYN + + A+ + +M
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKM- 505
Query: 182 EDDLCVPNIHTYNILI 197
ED+ C+P+ T+ I+I
Sbjct: 506 EDNGCIPDAVTFEIII 521
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 13/215 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI G C +++ A F +++ +G + N V+Y L+NGVC+
Sbjct: 994 PDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGD------- 1046
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R A K+ ++ R +PDV ++ ++ + + M KGI V T
Sbjct: 1047 ---TRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVT 1103
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYRQ 179
Y +++ C G++++A LL +MV ++P+ TYN G+ + ++ + +
Sbjct: 1104 YNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSK 1163
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
M ED+ C N T+ I+I + D V ++ +
Sbjct: 1164 M-EDNGCKANAVTFEIIISALFEKDENDKVEKLLH 1197
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 11/173 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + Y+SLI G CK RI + EM +RG NV+TY+ L++G+C+ L
Sbjct: 371 VPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHL----- 425
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +F++M+ +GI P+ +F+I+L + + + + + + KG V
Sbjct: 426 -----DRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVY 480
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGA 173
TY ++ C G +E+A +L +M NG P A T+ +KD NG
Sbjct: 481 TYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALF-KKDENGG 532
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CKI A + L ++ R +P+VV YN +++ +C+ + +
Sbjct: 1034 YGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKH----------QLVS 1083
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +F EM V+GI DV +++ +++ + K + ++ LN M K I P V TY +V
Sbjct: 1084 KAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILV 1143
Query: 127 KCLCSCGR--IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
LC G+ ++++ +L +M NG +A T+ + + + KL +M
Sbjct: 1144 DALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEM 1199
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 104/223 (46%), Gaps = 13/223 (5%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
+ ++GI+PD+ + +I+++ + + + L + ++G P T+T+++ LC G+
Sbjct: 952 LELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQ 1011
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+ A +++ G + +Y D A+KL R++ + L P++ YN
Sbjct: 1012 VNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKI-DGRLTKPDVVMYN 1070
Query: 195 ILIGMFMALNRMDMVREIWN-----HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+I AL + +V + + +VKG + D+ +Y LI+G C K KEA
Sbjct: 1071 TIID---ALCKHQLVSKAYGLFFEMNVKG--ISADVVTYNTLIYGFCIVGKLKEAIGLLN 1125
Query: 250 EMIEKGLLPQKVTFETLYRGLIQ--SDMLRTWRRLKKKLDEES 290
+M+ K + P T+ L L + D+L + K+++
Sbjct: 1126 KMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNG 1168
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 88/219 (40%), Gaps = 1/219 (0%)
Query: 52 RASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK 111
+ H + + +A F+ M P + F+ +L +++ ++ + ++
Sbjct: 27 HSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLE 86
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
KGI P + T ++ C C G+I +L ++++ G P T N K +
Sbjct: 87 LKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVK 146
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
A+ + ++ + + +Y LI + ++ + G ++ Y+ +
Sbjct: 147 KALHFHDKLLAQGFQLNQV-SYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTI 205
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
I LC+ Q EA F EM KG+ VT+ TL G
Sbjct: 206 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 244
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 102/244 (41%), Gaps = 13/244 (5%)
Query: 33 RGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
+G++P++ T N+L+N C + N + ++ RG PD +F+ +++
Sbjct: 955 KGIQPDLFTLNILINCFCHMGQITFN----------FSILAKILKRGYHPDTITFTTLIN 1004
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+ +L + + +G +Y +++ +C G A +LL ++ P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
YN + + A L+ +M + ++ TYN LI F + ++ +
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISA-DVVTYNTLIYGFCIVGKLKEAIGL 1123
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQK--WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
N + + ++ +Y +L+ LC++ K E+ +M + G VTFE + L
Sbjct: 1124 LNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183
Query: 271 IQSD 274
+ D
Sbjct: 1184 FEKD 1187
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 140/295 (47%), Gaps = 17/295 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + S+I G CK +++ AE + MIE+GVEPN +TYNV+++G C R +
Sbjct: 281 PDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMG----- 335
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++FD M +GIEPD+ S++ +++ Y K ++ + + G+ P++ T
Sbjct: 336 -----RARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVT 390
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
+ +++ L GR E A+ EM G P+ T+ Y AM + ++
Sbjct: 391 CSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLE 450
Query: 181 --KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ED NI Y +I ++D + + L D+ +YT +I G C++
Sbjct: 451 RRRED----TNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE 506
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
EA +M + G LP T+ + RG +S + + K++ +S +F
Sbjct: 507 GLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSF 561
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 18/270 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGV-EPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+T+LI G N++ A +++ + EP+ V Y +++G+C++
Sbjct: 145 FTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKG------------ 192
Query: 66 RNAEKVFDEMRV--RGI-EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ +K FD +R+ +GI +PD ++IV+ + + + LN MK+K I P + TY
Sbjct: 193 -HTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITY 251
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
TS++ L + E L EM+ + P T+N A ++ M E
Sbjct: 252 TSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIE 311
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ PN TYN+++ + +M R I++ + + D+ SYT LI+G EK+K
Sbjct: 312 KGV-EPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMD 370
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+A Q F E+ + GL P VT L RGL +
Sbjct: 371 KAMQLFREISQNGLKPSIVTCSVLLRGLFE 400
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 147/324 (45%), Gaps = 50/324 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +Y +I +CK +D A L EM ++ + P+++TY L++G+ + + ++
Sbjct: 211 PDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLS------QW 264
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK +F EM I PDV +F+ V+ + K + + + + +M EKG+ P T
Sbjct: 265 EK----VRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEIT 320
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V+ C G++ A + M+ G+ P +Y Y +K + AM+L+R++
Sbjct: 321 YNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREIS 380
Query: 182 EDDL---------------------C-------------VPNIHTYNILIGMFMALNRMD 207
++ L C +PN++T+ L+G + +
Sbjct: 381 QNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYF---KNG 437
Query: 208 MVREIWNHVKGSEL---GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+V E +H E ++ YT +I+GLC+ K +A F ++ GL P +T+
Sbjct: 438 LVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYT 497
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDE 288
+ G Q +L + + +K+++
Sbjct: 498 AMISGYCQEGLLDEAKDMLRKMED 521
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 143/295 (48%), Gaps = 17/295 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGV-EPNVVTYNVLLNGVCRRASLHPNER 60
P+ MY +++ G CK A L ++E+G+ +P+ YN++++ C+ L
Sbjct: 176 PDEVMYGTVMDGLCKKGHTQKAFDLL-RLMEQGITKPDTCIYNIVIDAFCKDGMLD---- 230
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + +EM+ + I PD+ +++ ++ + + + M I P V
Sbjct: 231 ------GATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVC 284
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ SV+ LC G++EDAEE++ M+ GV P+ TYN Y R A +++ M
Sbjct: 285 TFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSM 344
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P+I +Y LI ++ +MD +++ + + L + + ++L+ GL E +
Sbjct: 345 IDKGI-EPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGR 403
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM----LRTWRRLKKKLDEESI 291
+ A +F EM G +P T TL G ++ + + + +L+++ ++ +I
Sbjct: 404 TECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNI 458
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 12/252 (4%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+D A +M+ P+ V+++ LL +A +H K + +F E+
Sbjct: 53 LDDAFSLFRQMVTTKPLPSAVSFSKLL-----KALVH-----MKHYSSVVSIFREIHKLR 102
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
I D + S V++ H+ L L +KGI T+T++++ L + +++DA
Sbjct: 103 IPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAV 162
Query: 140 ELLGEMVRNGV-SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L ++VR + P Y + A L R M E + P+ YNI+I
Sbjct: 163 HLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLM-EQGITKPDTCIYNIVID 221
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
F +D + N +K + D+ +YT LI GL + +W++ F+EMI + P
Sbjct: 222 AFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYP 281
Query: 259 QKVTFETLYRGL 270
TF ++ GL
Sbjct: 282 DVCTFNSVIDGL 293
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 118/285 (41%), Gaps = 47/285 (16%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRN 67
++++ C ++R D+ L ++G+ N VT+ L+ G+ E +++
Sbjct: 111 STVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFA----------ENKVKD 160
Query: 68 AEKVFDEMRVRGI-EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +F ++ I EPD + V+ + Q + D L M++ P Y V+
Sbjct: 161 AVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVI 220
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G ++ GA L +MK+ ++
Sbjct: 221 DAFCKDGMLD-----------------------------------GATSLLNEMKQKNI- 244
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+I TY LI L++ + VR ++ + + D+ ++ +I GLC++ K ++A +
Sbjct: 245 PPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEE 304
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
MIEKG+ P ++T+ + G + RR+ + ++ I
Sbjct: 305 IMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGI 349
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ + +L+ G+ K ++ A ++ R + N+ Y ++NG+C+ L
Sbjct: 420 IPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLD---- 475
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A F+++ + G+ PDV +++ ++ Y + + D L M++ G P
Sbjct: 476 ------KAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNR 529
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
TY +V+ ++ + + L E+ S A T
Sbjct: 530 TYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAAT 565
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G+C+ +D A+ L +M + G P+ TYNV++ G R + + + F
Sbjct: 491 PDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAF 550
Query: 62 EKTIRNAEKVFDEMRV 77
K I F+ V
Sbjct: 551 LKEIAGKSFSFEAATV 566
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 133/273 (48%), Gaps = 26/273 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + L+ G+CK ++ + M+++G+ P+VVTYN L++G C
Sbjct: 263 PDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYC----------L 312
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A+ +F+ M G+ PD+ S++I+++ + + K +++ N M K I P V T
Sbjct: 313 VKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVT 372
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ L GRI A +L+ +M GV P+ TYN + A+ L + K
Sbjct: 373 YNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFK 432
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+++TY ILI + D+ +++Y ++IHG C+K +
Sbjct: 433 DQGI-QPSMYTYTILIDGLCKVEGYDIT---------------VNTYNVMIHGFCKKGLF 476
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA +M + +P VT+E R L+ ++
Sbjct: 477 DEALSLLSKMKDSSCIPNAVTYEITIRSLLDNN 509
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 129/268 (48%), Gaps = 11/268 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N MY ++IYG CK ++ A EM+ +G+ PNVVTY+ L++G L
Sbjct: 194 NAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKL------- 246
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++A +F+++ + I+PD +F+I++ + + K + M ++GI P V TY
Sbjct: 247 ---KDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTY 303
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S++ C + A+ + M + GV+P +YN + K + AM L+ +M
Sbjct: 304 NSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHC 363
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
++ +PN+ TYN LI R+ ++ + + + ++ +Y +I L + +
Sbjct: 364 KNI-IPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVD 422
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGL 270
+A + ++G+ P T+ L GL
Sbjct: 423 KAIALITKFKDQGIQPSMYTYTILIDGL 450
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 138/285 (48%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI+G CK+ A L + + V+ N V YN ++ G+C+ +K +
Sbjct: 163 YGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCK----------DKHVN 212
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A ++ EM +GI P+V ++S ++ + K + ++D N + + I P T+ +V
Sbjct: 213 DAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILV 272
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C ++++ + + M++ G+ P TYN Y K+ N A ++ M + +
Sbjct: 273 DGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVN 332
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+I +YNILI F + ++D ++N + + ++ +Y LI GL + + A Q
Sbjct: 333 -PDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQ 391
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+M ++G+ P +T+ ++ L ++ + L K ++ I
Sbjct: 392 LVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGI 436
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 125/268 (46%), Gaps = 36/268 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y SL+ G+C + ++ A+ M + GV P++ +YN+L+NG C+
Sbjct: 297 IPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKI-------- 348
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K + A +F+EM + I P+V +++ ++ S++ + +L ++ M ++G+ P +
Sbjct: 349 --KKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNIL 406
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S++ L +++ A L+ + G+ PS TY
Sbjct: 407 TYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILI------------------- 447
Query: 181 KEDDLCVP-----NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
D LC ++TYN++I F D + + +K S + +Y + I L
Sbjct: 448 --DGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSL 505
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTF 263
+ + +A + F EMI +GLL + ++
Sbjct: 506 LDNNENDKAEKLFREMITRGLLNRSASY 533
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 40/293 (13%)
Query: 33 RGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
RG++PN+ N+L+ C+ L P + I A D++ G D S+ ++H
Sbjct: 115 RGIKPNLFNCNILIYCFCQLG-LIPCQ-----IHQAFLFHDKLVALGFHLDQVSYGTLIH 168
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+ + + +LD L + K + Y +V+ +C + DA +L EMV G+SP
Sbjct: 169 GLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISP 228
Query: 153 SAETYNCFFKEYRGRKDANGAMKLY-------------------------RQMKEDDLC- 186
+ TY+ + A+ L+ R+MKE
Sbjct: 229 NVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVF 288
Query: 187 --------VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+P++ TYN L+ + + ++ + I+N + + D+ SY +LI+G C+
Sbjct: 289 AMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKI 348
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+K +A F EM K ++P VT+ +L GL +S + +L ++ + +
Sbjct: 349 KKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGV 401
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP--- 57
+PNV Y SLI G K RI A + + +M +RGV PN++TYN +++ + + +
Sbjct: 367 IPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIA 426
Query: 58 ------NERFEKTIRNAEKVFDEM-RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFM 110
++ + ++ + D + +V G + V ++++++H + + +L L+ M
Sbjct: 427 LITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKM 486
Query: 111 KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC 159
K+ P TY ++ L + AE+L EM+ G+ + +Y C
Sbjct: 487 KDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASYPC 535
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 44/246 (17%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLH--VYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ +A +F+ + + P F+ +L V S+ + LSL + M+ +GI P +
Sbjct: 67 VDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQK--MEFRGIKPNLFNC 124
Query: 123 TSVVKCLCSCGRI---------------------------------------EDAEELLG 143
++ C C G I A +LL
Sbjct: 125 NILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQ 184
Query: 144 EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL 203
+ V +A YN K N A LY +M + PN+ TY+ LI F +
Sbjct: 185 RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGIS-PNVVTYSALISGFFVV 243
Query: 204 NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
++ +++N + + D ++ +L+ G C+ +K KE F M+++G++P VT+
Sbjct: 244 GKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTY 303
Query: 264 ETLYRG 269
+L G
Sbjct: 304 NSLMDG 309
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 84/227 (37%), Gaps = 50/227 (22%)
Query: 104 LDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163
L K+NF+ +Y+S S ++DA L ++R +P A +N
Sbjct: 46 LTKINFI----------SYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGS 95
Query: 164 YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM--DMVREIWNHVKGSEL 221
K + + L ++M+ + PN+ NILI F L + + + H K L
Sbjct: 96 LVKSKHYHTVLSLSQKMEFRGI-KPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVAL 154
Query: 222 GLDLD--SYTMLIHGL-----------------------------------CEKQKWKEA 244
G LD SY LIHGL C+ + +A
Sbjct: 155 GFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDA 214
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ EM+ KG+ P VT+ L G L+ L K+ E+I
Sbjct: 215 FDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENI 261
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 147/297 (49%), Gaps = 17/297 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV ++ LI G CK +++ A+ + MIE+GVEP+++TY+ +++G C R
Sbjct: 271 PNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQ------- 323
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +VF+ +R +GI+P++ S+SI+++ Y + ++ + +KG+ P T
Sbjct: 324 ---VDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVT 380
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
Y++++ L GRI DA+++ EM+R G +P ++ Y AM L+ ++
Sbjct: 381 YSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLE 440
Query: 181 --KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ED NI Y ++I +R+ I+ + L D+ +Y ++I G C +
Sbjct: 441 RNRED----TNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCRE 496
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
+ E +M + G +T+ + +G +S+ + K++ +F +
Sbjct: 497 GLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDA 553
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 140/285 (49%), Gaps = 27/285 (9%)
Query: 14 WCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV----------------CRRASLHP 57
+C +RID A L ++ G+ NVVT+N LL G+ R P
Sbjct: 107 YCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEP 166
Query: 58 NERFEKTIRNA-------EKVFDEMRVR---GIEPDVTSFSIVLHVYSRAHKPQLSLDKL 107
NE T+ N EK +R+ +PDV ++SIV+ + +++ L
Sbjct: 167 NEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLL 226
Query: 108 NFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR 167
N MK+K I P + TY S++ LC G+ E + LL EMV ++P+ T++
Sbjct: 227 NEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKE 286
Query: 168 KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS 227
A ++ R M E + P+I TY+ ++ + ++D R ++N ++ + ++ S
Sbjct: 287 GKVEDADEVMRHMIEKGV-EPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFS 345
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
Y++LI+G C+K+ +A Q F E+ +KGL P VT+ T+ GLI+
Sbjct: 346 YSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIE 390
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 17/239 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y+ LI G+CK + A + GE+ ++G++P+ VTY+ +L+G+
Sbjct: 341 PNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGR------- 393
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR---AHKPQLSLDKLNFMKEKGICPT 118
I +A+K+FDEM G PD+ S +L Y + + L KL +E
Sbjct: 394 ---IGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNRED---TN 447
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
++ YT V+ LC R+ +A + ++ G+ P TYN + + + R
Sbjct: 448 ISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILR 507
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+M ED+ C N TYN+++ F N++ + + G D + +LI+ L E
Sbjct: 508 KM-EDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKE 565
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V+ Y +I G+C+ D + L +M + G N +TYNV++ G R +
Sbjct: 480 IPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVS 539
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
F K EM RG D T+ ++++V
Sbjct: 540 FMK----------EMAGRGFSFDATTTGVLINV 562
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 4/141 (2%)
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
SC ++DA L MVR PS ++ FK K + + L+R+M+ + + +
Sbjct: 41 SC--LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISD- 97
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
NI+ + +R+D + + + ++ ++ L+ GL + K +A F +
Sbjct: 98 SILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKK 157
Query: 251 MI-EKGLLPQKVTFETLYRGL 270
++ EK P +V + T+ GL
Sbjct: 158 LVREKICEPNEVMYGTVMNGL 178
>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
Length = 514
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 132/258 (51%), Gaps = 11/258 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI G CK R+ AER L EM + + PNV+T++ L++ +R L
Sbjct: 226 PNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKL------ 279
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ V+ M I+P+V ++S +++ ++ ++ L+ M KG P V T
Sbjct: 280 ----SKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+++ R++D +LL +M + GV+ + + N K Y + A+ ++ M
Sbjct: 336 YSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMT 395
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L +PNI +YNI++ A ++ + H++ + LD+ +YT++IHG+C+
Sbjct: 396 SNGL-IPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMV 454
Query: 242 KEACQYFVEMIEKGLLPQ 259
KEA F ++ K + P
Sbjct: 455 KEAYDLFYKLKFKRVEPD 472
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 136/272 (50%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ L+ +C+ + A +LG+M++ G+EP++VT + L+NG C
Sbjct: 121 PDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFC----------L 170
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+I++A V +M GI+ DV +I++ + +L+ L MK++GI P V T
Sbjct: 171 SNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVT 230
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ LC GR+ DAE L EM ++P+ T++ Y R + +Y+ M
Sbjct: 231 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI 290
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN+ TY+ LI NR+D ++ + + ++ +Y+ L +G + +
Sbjct: 291 QMSID-PNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRV 349
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + +M ++G+ V+ TL +G Q+
Sbjct: 350 DDGIKLLDDMPQRGVAANTVSCNTLIKGYFQA 381
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
+LI G+ + +ID+A G M G+ PN+ +YN++L G L N EK +
Sbjct: 373 TLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAG------LFANGEVEKALSR- 425
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
F+ M+ + D+ +++I++H +A + + D +K K + P YT ++
Sbjct: 426 ---FEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAE 482
Query: 129 LCSCGRIEDAEEL 141
L G +A+ L
Sbjct: 483 LNRAGMRTEADAL 495
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHV---KGSELGLDLDSYTMLIHGLCEKQKWKE 243
+P+I +N ++ + D+V +W + +G E+ DL + +L++ C +
Sbjct: 82 LPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSS 141
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A Y +M++ G+ P VT +L G S+ ++ + ++++ I
Sbjct: 142 ALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGI 189
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 151/325 (46%), Gaps = 49/325 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +Y ++I G CKI ++ A M GV + VTYN L+ G+C
Sbjct: 113 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS----- 167
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ +M +R I P+V +F+ V+ V+ + K ++ M + + P V T
Sbjct: 168 -----DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 222
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR+++A+++L MV G P TYN + K + KL+R+M
Sbjct: 223 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 282
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWN--------------------------- 214
+ L V + TYN +I + R D +EI++
Sbjct: 283 QRGL-VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKA 341
Query: 215 -----HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+++ SE+ LD+ +Y ++IHG+C+ ++A F + KGL P V++ T+ G
Sbjct: 342 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 401
Query: 270 LIQSDMLRTWRR---LKKKLDEESI 291
+ R W + L +K+ E+ +
Sbjct: 402 FCRK---RQWDKSDLLYRKMQEDGL 423
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 146/305 (47%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ ++ ++ K D+ M G+ ++ +YN+++N +CR + R
Sbjct: 7 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS------R 60
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F A V +M G EPDV + S +++ + + ++ ++D ++ M+E G P V
Sbjct: 61 FVI----ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 116
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C G + DA EL M R+GV A TYN + A +L R M
Sbjct: 117 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 176
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D+ VPN+ T+ +I +F+ + +++ + + D+ +Y LI+GLC +
Sbjct: 177 VMRDI-VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 235
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFGS 295
EA Q M+ KG LP VT+ TL G +S + +L +++ + ++IT+ +
Sbjct: 236 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 295
Query: 296 EFQNY 300
Q Y
Sbjct: 296 IIQGY 300
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 143/297 (48%), Gaps = 26/297 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----------- 51
+V Y++LIYG+C + ++ A L EM+ + + P+V TY +L++ + +
Sbjct: 481 DVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVL 540
Query: 52 ----RASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+A + P+ T+ N A+ VF+ M + G+ PDV +++I+++ + ++
Sbjct: 541 AVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKS 600
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+L+ M +K + P TY+S+V LC GRI +L+ EM G TY
Sbjct: 601 KMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITY 660
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
N + A+ L+ +MK+ + PN T+ IL+ R+ +E++ +
Sbjct: 661 NSLIDGLCKNGHLDKAIALFNKMKDQGI-RPNTFTFTILLDGLCKGGRLKDAQEVFQDLL 719
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
LD+ Y ++I+G C++ +EA +M E G +P VTF+ + L + D
Sbjct: 720 TKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKD 776
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 136/285 (47%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV+MY+++I CK + A EM +G+ +VVTY+ L+ G C L
Sbjct: 445 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKL------ 498
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + +EM ++ I PDV +++I++ + K + + L M + + P V T
Sbjct: 499 ----KEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFT 554
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ ++ A+ + M GV+P TY + K + A+ L+++M
Sbjct: 555 YNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMH 614
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ VP+ TY+ L+ R+ V ++ + ++ D+ +Y LI GLC+
Sbjct: 615 QKNM-VPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHL 673
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A F +M ++G+ P TF L GL + L+ + + + L
Sbjct: 674 DKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 718
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CKI A + L ++ R +PNV Y+ +++ +C+ + +
Sbjct: 415 YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKY----------QLVS 464
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +F EM V+GI DV ++S +++ + K + ++ LN M K I P V TYT +V
Sbjct: 465 EAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILV 524
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
L G++++A+ +L M++ V P TYN Y + A ++ M +
Sbjct: 525 DALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGV- 583
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++HTY ILI F +D ++ + + D +Y+ L+ GLC+ +
Sbjct: 584 TPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWD 643
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM ++G +T+ +L GL ++ L L K+ ++ I
Sbjct: 644 LIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGI 688
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 136/314 (43%), Gaps = 45/314 (14%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G C+I A +FL ++ R +PNV YN +++ +C+ + +
Sbjct: 101 YATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKY----------QLVS 150
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +F EM V+GI +V ++S +++ + K + +L LN M K I P V TY +V
Sbjct: 151 EAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILV 210
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G++++A+ +L M++ V + TY+ Y + A ++ M +
Sbjct: 211 DALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV- 269
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL------------------------- 221
P++H+YNI+I F + R+D ++ + S
Sbjct: 270 TPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSL 329
Query: 222 -------GLDLDSYTM--LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
G+ D +T+ LI+ C + +++++G P VT TL +GL
Sbjct: 330 SHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCL 389
Query: 273 SDMLRTWRRLKKKL 286
++ KL
Sbjct: 390 KGQVKKALHFHDKL 403
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 134/311 (43%), Gaps = 27/311 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PNV+MY ++I CK + A EM +G+ NVVTY+ L+ G C L
Sbjct: 131 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGL 190
Query: 56 ---------HPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+PN E ++ A+ V M ++ +V ++S ++ Y
Sbjct: 191 LNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFL 250
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ + + N M G+ P V +Y ++ C R++ A L EM+ + P +
Sbjct: 251 VYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQ- 309
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N + K + A+ L +++ + P++ T NILI F + ++ + +
Sbjct: 310 FNKILDSFAKMKHYSTAVSLSHRLELKGI-QPDLFTLNILINCFCHMGQITFGFSVLAKI 368
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ LI GLC K + K+A + +++ +G +V++ TL G+ +
Sbjct: 369 LKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDT 428
Query: 277 RTWRRLKKKLD 287
R +L +K+D
Sbjct: 429 RGAIKLLRKID 439
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+SL+ G CK RI + EM +RG +V+TYN L++G+C+ N
Sbjct: 619 VPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCK------NGH 672
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K I +F++M+ +GI P+ +F+I+L + + + + + + KG V
Sbjct: 673 LDKAI----ALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVY 728
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ C G +E+A +L +M NG P+A T++ + + + A KL RQM
Sbjct: 729 IYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM 788
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
+SL L + ++G P T +++K LC G++++A +++ G + +Y
Sbjct: 46 VSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLI 105
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN-----HV 216
D A+K R++ + L PN+ YN +I AL + +V E + V
Sbjct: 106 NGVCRIGDTRAAIKFLRKI-DGRLAKPNVEMYNTIID---ALCKYQLVSEAYGLFSEMTV 161
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
KG + ++ +Y+ LI+G C K KEA M+ K + P T+ L L + +
Sbjct: 162 KG--ISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKV 219
Query: 277 RTWRR-----LKKKLDEESITFGSEFQNY 300
+ + LK + IT+ + Y
Sbjct: 220 KEAKSVLAVMLKACVKSNVITYSTLMDGY 248
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 139/300 (46%), Gaps = 26/300 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-SLHPNER 60
P + Y +L+ G CK+ R++ A L ++++ G P+VVTY L++G+ ++ S +
Sbjct: 67 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKL 126
Query: 61 FEKT------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F++ I A V+ M +G PDV + S ++ +
Sbjct: 127 FKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCK 186
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + ++ M+ +G+ P Y++++ LC +++ A E+L +M + +P T
Sbjct: 187 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 246
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN D A + +M E C P+++TYNILI F D +++ +
Sbjct: 247 YNILIDGLCKSGDVAAARAFFDEMLEAG-CKPDVYTYNILISGFCKAGNTDAACGVFDDM 305
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
S ++ +Y LI GLC++++ +A Y+ M E+G P + +L GL +S L
Sbjct: 306 SSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKL 365
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT+LI G + +I A M +G P+VVT + +++G+C+ I
Sbjct: 142 YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGR----------IG 191
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++F M RG+ P+ +S ++H +A K +L+ L MK+ P TY ++
Sbjct: 192 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 251
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G + A EM+ G P TYN + + + A ++ M C
Sbjct: 252 DGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSR-C 310
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEKQKWKEA 244
PN+ TY LI ++ + H+K E G DS Y+ L+ GLC+ K +
Sbjct: 311 SPNVVTYGTLISGLCKRRQLTKASLYYQHMK--ERGCPPDSFVYSSLVDGLCKSGKLEGG 368
Query: 245 CQYFVEMIEKGL 256
C F EM G+
Sbjct: 369 CMLFDEMERSGV 380
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 11/233 (4%)
Query: 41 TYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP 100
T+++L+NG+ + L A + E G D+ +++ ++ ++ K
Sbjct: 1 TFSILINGLVKAGMLI----------QAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKI 50
Query: 101 QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
Q ++ + + G PT+ATY +++ LC GR+E+A +LL ++V NG +P TY
Sbjct: 51 QEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 110
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
+K + A KL+++M L + + Y LI + ++ ++ +
Sbjct: 111 IDGLGKKKRSFEAYKLFKEMASRGLALDTV-CYTALIRGLLQAGKIPQASSVYKTMTSQG 169
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
D+ + + +I GLC+ + A + F M +GL P +V + L GL ++
Sbjct: 170 CVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 222
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 13/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +++I G CK RI A R M RG+ PN V Y+ L++G+C+
Sbjct: 171 VPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK--------- 221
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A ++ +M+ PD +++I++ ++ + + M E G P V
Sbjct: 222 -ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVY 280
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ C G + A + +M + SP+ TY R+ A Y+ M
Sbjct: 281 TYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHM 340
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
KE C P+ Y+ L+ +++ +++ ++ S + + + T LI LC+ +
Sbjct: 341 KERG-CPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANR 398
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA F I K +P + ++ LI+S
Sbjct: 399 VDEAVSLF-NAIRKEGMPHPYAYNSIISALIKS 430
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI G CK ++ A + M ERG P+ Y+ L++G+C+ L
Sbjct: 312 PNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLE----- 366
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+FDEM G+ T ++ H+ +A++ ++ N ++++G+ P
Sbjct: 367 -----GGCMLFDEMERSGVANSQTRTRLIFHL-CKANRVDEAVSLFNAIRKEGM-PHPYA 419
Query: 122 YTSVVKCLCSCGRIEDAEELLGEM 145
Y S++ L G++ + + + EM
Sbjct: 420 YNSIISALIKSGKVNEGQAVYQEM 443
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 138/296 (46%), Gaps = 26/296 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
PN Y ++I CK N+++ A + + +G+ P+V TYN L+ G+C
Sbjct: 369 PNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMEL 428
Query: 51 ----RRASLHPNER----------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ HP+E F ++ A + EM V G +V +++ ++ + +
Sbjct: 429 YKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCK 488
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + + M+ +G+ TY +++ LC R+E+A +L+ +M+ G+ P T
Sbjct: 489 NKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFT 548
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + D A + + M D C P+I TY LI R++ ++ +
Sbjct: 549 YNSLLTYFCKAGDIKKAADIVQTMASDG-CEPDIVTYGTLIAGLCKAGRVEAATKLLRTI 607
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ + L +Y +I L +++ KEA + F EMIEK P VT++ ++RGL Q
Sbjct: 608 QMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQ 663
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 140/280 (50%), Gaps = 12/280 (4%)
Query: 13 GWCKINRIDMAERFLGEM-IERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKV 71
G+CK RI+ A RF+ EM + G P+ T+N+L+NG+ + +++A +V
Sbjct: 274 GFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGH----------VKHALEV 323
Query: 72 FDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCS 131
D M G +PD+ +++ ++ + + ++ LN M E+ P TY +++ LC
Sbjct: 324 MDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCK 383
Query: 132 CGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIH 191
++E+A +L + G+ P TYN + ++ AM+LY++MK C P+
Sbjct: 384 ENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKG-CHPDEF 442
Query: 192 TYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251
TYN+LI ++ + ++ S ++ +Y LI G C+ ++ EA + F +M
Sbjct: 443 TYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQM 502
Query: 252 IEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+G+ VT+ TL GL +S+ + +L ++ E +
Sbjct: 503 ELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGL 542
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 136/297 (45%), Gaps = 53/297 (17%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y +LI G+CK RI AE +M +GV N VTYN L++G+C+ +ER E
Sbjct: 475 NVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCK------SERVE 528
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A ++ D+M + G+ PD +++ +L + +A + + D + M G P + TY
Sbjct: 529 E----ASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTY 584
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC GR+E A +LL + G++ + YN + RK + A++L+R+M E
Sbjct: 585 GTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIE 644
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ-KW 241
P+ TY I+ GLC+
Sbjct: 645 KAEA-PDAVTYKIVF-----------------------------------RGLCQGGGPI 668
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL------KKKLDEESIT 292
EA + +EM+E+G +P+ +F L GL M+ T +L K K + +T
Sbjct: 669 GEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEVT 725
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 129/313 (41%), Gaps = 52/313 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ N Y L+ N++ + E M+ RG+ P+V T+N+L+ +CR + P
Sbjct: 157 VANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRP--- 213
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL---------------- 104
A + +EM G+ PD +F+ ++ + ++
Sbjct: 214 -------AILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNV 266
Query: 105 ----------------DKLNFMKE----KGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
+ L F++E +G P T+ +V L G ++ A E++
Sbjct: 267 TVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDM 326
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
M+R G P TYN + + A+K+ QM E D C PN TYN +I N
Sbjct: 327 MLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERD-CSPNTVTYNTIISTLCKEN 385
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+++ ++ + G + D+ +Y LI GLC + A + + EM KG P + T+
Sbjct: 386 QVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYN 445
Query: 265 TL-----YRGLIQ 272
L +RG +Q
Sbjct: 446 MLIDSLCFRGKLQ 458
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 119/279 (42%), Gaps = 47/279 (16%)
Query: 31 IERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIV 90
+E GV N YN LLN + L + E M RGI PDV++F+I+
Sbjct: 152 VEFGVVANTHFYNFLLNVLVDGNKL----------KLVEIAHSNMVSRGIRPDVSTFNIL 201
Query: 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK----------------------C 128
+ RAH+ + ++ + M++ G+ P T+T++++ C
Sbjct: 202 IKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGC 261
Query: 129 -------------LCSCGRIEDAEELLGEM-VRNGVSPSAETYNCFFKEYRGRKDANGAM 174
C GRIE+A + EM +R G P T+N A+
Sbjct: 262 VVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHAL 321
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
++ M + P+I+TYN LI L +D ++ N + + + +Y +I
Sbjct: 322 EVMDMMLREGF-DPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIIST 380
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
LC++ + +EA + + + KG+LP T+ +L +GL S
Sbjct: 381 LCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLS 419
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%)
Query: 111 KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
K+ P+ + + V+ L G + +++L EM + ++ F + Y
Sbjct: 81 KQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLY 140
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
N ++ M+ + V N H YN L+ + + N++ +V +++ + D+ ++ +
Sbjct: 141 NEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNI 200
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
LI LC + + A EM + GLLP + TF T+ +G I+ L R+K+++ E
Sbjct: 201 LIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVE 258
>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
Length = 573
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 15/275 (5%)
Query: 1 MPNVKMYTSLI---YGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP 57
MP+V Y +LI Y W + ++ + L EM + G+ PNVVT+NVL+NG C+
Sbjct: 220 MPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLINGYCK------ 273
Query: 58 NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
E I A KVF+EMR GI ++ +++ ++ R K + S+ + M+E G+
Sbjct: 274 ----ESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLA- 328
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T+ T SV+ C G + +AE + M + G+ P+ TYN Y+ A
Sbjct: 329 TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAK 388
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
M + P++ TYN LI F V + + +K + + DL +Y +LI LC
Sbjct: 389 GAMAGKGIS-PDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCC 447
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
K + ++A + EM+E GL P+ T+ + G +
Sbjct: 448 KGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCE 482
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 50/266 (18%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
S++ G+CK + AE ++ M ++G++PNVVTYN L++G +R K ++ A
Sbjct: 335 SVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGY---------QRLGK-MKEA 384
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
M +GI PDV +++ ++ ++ + + L+ MKE G+ + TY ++
Sbjct: 385 TAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGA 444
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV- 187
LC G + A +LL EMV G+ P TYN + + DA GA + +M++ C
Sbjct: 445 LCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEK---CKK 501
Query: 188 -PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
N+ T N+ + F + +MD + N
Sbjct: 502 RANVVTCNVFLKYFCKMGKMDEANVVLN-------------------------------- 529
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQ 272
EM+EKGL+P ++T+E + G+I+
Sbjct: 530 ---EMLEKGLVPNRITYEIINSGMIE 552
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 128/293 (43%), Gaps = 24/293 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +L+ + +R+D+AER + R V P+ T+N++++G+C+ L
Sbjct: 151 PSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQL------ 204
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY---SRAHKPQLSLDKLNFMKEKGICPT 118
R A V +MR G+ P V +++ ++ Y RA K L M + GI P
Sbjct: 205 ----RKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPN 260
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V T+ ++ C I A ++ EM ++G+ + TY +MKL
Sbjct: 261 VVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVE 320
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG-SELGL--DLDSYTMLIHGL 235
+M+E L + + T N ++ F + M+ E V G ++ G+ ++ +Y LI G
Sbjct: 321 EMEE--LGLATLPTLNSVLNGFC---KKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGY 375
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
K KEA M KG+ P T+ L G S WR + LDE
Sbjct: 376 QRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTST---DWRSVSGLLDE 425
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 10/142 (7%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI C + A + L EM+E G+EP TYN ++NG C + +
Sbjct: 438 YNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGD----------AK 487
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + M +V + ++ L + + K + LN M EKG+ P TY +
Sbjct: 488 GAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIIN 547
Query: 127 KCLCSCGRIEDAEELLGEMVRN 148
+ G + D ++ +N
Sbjct: 548 SGMIEKGYVPDIRGYAADVSKN 569
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 135/259 (52%), Gaps = 13/259 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N++ +TSL+YGWC+ ++ A+ L +M E G EP++V Y LL+G +
Sbjct: 252 NLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMA------ 305
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A + +MR RG EP+ T +++++ + + + ++ M+ V TY
Sbjct: 306 ----DAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTY 361
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T++V C G+I+ +L +M++ G+ PS TY + ++ ++L +MK+
Sbjct: 362 TALVSGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQ 421
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ P+I YN++I + L + +WN ++G+ L D++ ++I+GL +
Sbjct: 422 IEY-HPDIGIYNVVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQGCLL 480
Query: 243 EACQYFVEMIEKGL--LPQ 259
EAC +F EM+ +GL +PQ
Sbjct: 481 EACDHFKEMVARGLFSVPQ 499
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 131/272 (48%), Gaps = 14/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT LI CK++R++ A + EM E +VVTY L++G C+
Sbjct: 321 PNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK------- 373
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I V D+M +G+ P ++ ++ + + K L+ + MK+ P +
Sbjct: 374 ---IDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEYHPDIGI 430
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V++ C G +++A L EM NG+SP A+T+ + A +++M
Sbjct: 431 YNVVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQGCLLEACDHFKEMV 490
Query: 182 EDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCEK 238
L VP T +L+ + +++M +++W+ + KGS L + S+T+ IH L K
Sbjct: 491 ARGLFSVPQYGTLKLLLNTLLKDKKLEMAKDVWSCITSKGS-CELSVSSWTIWIHALFSK 549
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
KEAC Y +EMIE +PQ TF L +GL
Sbjct: 550 GYEKEACSYCLEMIELEFMPQPDTFAKLMKGL 581
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 147/299 (49%), Gaps = 46/299 (15%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMI----------------------------------- 31
Y +L+YG+C++ ++MA R +MI
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 330
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
+ G+ PNV YN L++ +C+ NERF+ +A+++F EM RG+EP+ +++I++
Sbjct: 331 DLGMVPNVFAYNALIDKLCK------NERFD----DADRLFKEMAGRGLEPNEVTYAILI 380
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
H + + +L + M++KGI TV Y S++ C G ++ A LL MV+ G++
Sbjct: 381 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 440
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P+A +Y+ D + M+L+R+M E + N +T+ LI F +MD
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN-YTFTALINGFCKDKKMDEAAR 499
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+++ + S + + ++ ++I G C ++A Q + +M+E GL P T+ +L GL
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 137/257 (53%), Gaps = 23/257 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +LI CK R D A+R EM RG+EPN VTY +L++ +C+R
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG------- 387
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK----LNFMKEKGIC 116
I +A +FD+MR +GI+ V ++ +++ Y + Q SLD+ L+ M ++G+
Sbjct: 388 ---MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCK----QGSLDRARGLLSGMVKEGLT 440
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
PT A+Y+ ++ LC G + EL EM G++ + T+ + K + A +L
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM--LIHG 234
+ +M + ++ +PN T+N++I + + + ++++ + E+GL D+YT LI G
Sbjct: 501 FDKMIDSNV-IPNEVTFNVMIEGYCLVGNIRKAFQLYDQM--VEMGLKPDNYTYRSLISG 557
Query: 235 LCEKQKWKEACQYFVEM 251
LC +A ++ ++
Sbjct: 558 LCLTSGVSKANEFVADL 574
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 136/328 (41%), Gaps = 62/328 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN + +I G+C + I A + +M+E G++P+ TY L++G+C + +
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569
Query: 61 FEKTIRNAEKV-------------------------FDEMRVRGIEPDVTSFSIVLHVYS 95
F + N+ V +DEM VRG++ D+ SF+I+++
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629
Query: 96 RAHKPQLSLDKLNFMKEKGI-----------------------------------CPTVA 120
+ H + S MKE+G+ P
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 689
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T ++ LC G + AE L EM+ V P+ TYNCF + D A L+ M
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L +I ++NILI ++ ++ + + S D SY+ +IH LC+
Sbjct: 750 LQGHLA--SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGD 807
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYR 268
+A + + EM+ KGL P V + R
Sbjct: 808 INKAFELWNEMLYKGLKPDVVAYNIFIR 835
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 118/285 (41%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y L+YG CK R+ A M+ GV + VTY L+ G CR E E +R
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM------EELEMALR 289
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ +M G P + S ++ + + + + + G+ P V Y +++
Sbjct: 290 ----ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 345
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC R +DA+ L EM G+ P+ TY R A+ L+ +M++ +
Sbjct: 346 DKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIK 405
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
V ++ YN LI + +D R + + + L SY+ LI GLC +
Sbjct: 406 V-TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCME 464
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM E+G+ TF L G + + RL K+ + ++
Sbjct: 465 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +T LI CK + AE EM+ V PN TYN L+
Sbjct: 686 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFAT---------- 735
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A+ + M ++G + SF+I++ +A K Q ++D ++ + E G P +
Sbjct: 736 EGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCIS 794
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ LC G I A EL EM+ G+ P YN F + +++ A+ +Y M
Sbjct: 795 YSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMI 854
Query: 182 EDDLCVPNIHTYNILI 197
+ PN TY L+
Sbjct: 855 RSGV-QPNWDTYRALL 869
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 141/300 (47%), Gaps = 21/300 (7%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+YT+ I +C+ +D A + M GV+ + V YNVL+ G+C+ N R +
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCK------NMR----V 249
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+ A +V + M G+ D ++ +++ + R + +++L + M G P+ A + +
Sbjct: 250 QEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFM 309
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ L +E+A L ++ G+ P+ YN + + + A +L+++M L
Sbjct: 310 IDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGL 369
Query: 186 CVPNIHTYNILIGMFMALNRMDMVRE---IWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
PN TY ILI AL + M+ + +++ ++ + + + Y LI+G C++
Sbjct: 370 -EPNEVTYAILI---HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
A M+++GL P ++ L GL ++ L + L +++ E I + NY F
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA----WNNYTF 481
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 123/292 (42%), Gaps = 13/292 (4%)
Query: 3 NVKMYTS--LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
V YT+ +++ KI + +A +M++ GV + Y + C
Sbjct: 160 TVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE--------- 210
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A + M G++ ++++++ + + Q +++ N M G+
Sbjct: 211 -SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V C +E A + +M+R G PS + E R ++ A L ++
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + VPN+ YN LI R D ++ + G L + +Y +LIH LC++
Sbjct: 330 GDLGM-VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM 388
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
++A F +M +KG+ + +L G + L R L + +E +T
Sbjct: 389 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 440
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 12/244 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT +I K + A +M+ G PN VT+ VL+N +C+ L
Sbjct: 651 PDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLG----- 705
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+AE + EM + P+ +++ L ++ + + D L+ +G ++ +
Sbjct: 706 -----SAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKD-LHSAMLQGHLASIVS 759
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++K LC G+I++A +L+ ++ +G SP +Y+ E D N A +L+ +M
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P++ YNI I D I+ ++ S + + D+Y L+ G+ +
Sbjct: 820 YKGL-KPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHY 878
Query: 242 KEAC 245
+C
Sbjct: 879 DFSC 882
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ ++ + LI G CK +I A + ++ E G P+ ++Y+ +++ +C+ + N+
Sbjct: 754 LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI--NKA 811
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
FE +++EM +G++PDV +++I + + + +L M G+ P
Sbjct: 812 FE--------LWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWD 863
Query: 121 TYTSVVK 127
TY +++
Sbjct: 864 TYRALLS 870
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 96/248 (38%), Gaps = 36/248 (14%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI + + S +L + + L+ D + M + G+ YT+ ++ C ++ A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ M GV SA YN A+++ M + + TY L+
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV-TYRTLVY 276
Query: 199 MFMALNRMDMVREIWNHV---------------------------------KGSELGL-- 223
F + ++M I + + K +LG+
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
++ +Y LI LC+ +++ +A + F EM +GL P +VT+ L L + M+ L
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396
Query: 284 KKLDEESI 291
K+ ++ I
Sbjct: 397 DKMRDKGI 404
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 12/198 (6%)
Query: 107 LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRG 166
L GI T + ++ L + A +L +M+++GV Y + Y
Sbjct: 151 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 210
Query: 167 RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
++ +GA L +M+ + + + YN+L+ R+ E+ N + + D
Sbjct: 211 SRNLDGARGLVVRMESEGVKASAV-PYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+Y L++G C ++ + A + +MI G +P + + D LR KK+L
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMI------DELR-----KKEL 318
Query: 287 DEESITFGSEFQNYHFKP 304
EE+ + + + P
Sbjct: 319 VEEAFSLACKLGDLGMVP 336
>gi|357440039|ref|XP_003590297.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479345|gb|AES60548.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 661
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 134/277 (48%), Gaps = 13/277 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + LI+GWC I R++ A + EM G P V++Y+ ++ C+
Sbjct: 221 PNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQ---------- 270
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + DEM+ + P+V +++ ++ ++A K + +L + M G P
Sbjct: 271 EQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLF 330
Query: 122 YTSVVKCLCSCGRIEDAEELLG-EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ S++ L GRI+DA + M + V+P+ TYN + A + ++M
Sbjct: 331 FNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEM 390
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDM-VREIWNH-VKGSELGLDLDSYTMLIHGLCEK 238
++ LC P+I TY+ LI + +D + +I N V +GLDL +YT+LIHGL
Sbjct: 391 EKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRA 450
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ K A F EM ++ ++P+ T L + Q +M
Sbjct: 451 DRCKWAFDLFEEMADQDIVPRYKTCRLLLDEVKQKNM 487
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 97/250 (38%), Gaps = 37/250 (14%)
Query: 66 RNAEKVFDEMRVRGIE----------------------------------PDVTSFSIVL 91
++A ++FD+++ G+E P+ +F+I++
Sbjct: 171 KDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYIAPNAHTFNILI 230
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
H + + + + + MK G P V +Y+++++C C + +LL EM S
Sbjct: 231 HGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCS 290
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P+ TY + A+++ +M C P+ +N LI R+D
Sbjct: 291 PNVVTYTTIMCALAKAEKFEEALQVVERMNAVG-CRPDTLFFNSLIYTLGRAGRIDDATH 349
Query: 212 IWN-HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL-PQKVTFETLYRG 269
++ + + + + +Y +I C + + A EM + GL P T+ L +
Sbjct: 350 VFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKS 409
Query: 270 LIQSDMLRTW 279
+ + TW
Sbjct: 410 CFKMREIDTW 419
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 136/285 (47%), Gaps = 12/285 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ SL+ G C+ + A L M+E+G N V Y VLL+G + +L
Sbjct: 490 PSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLE----- 544
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ ++ EM+ RGI PD +F+ ++ S+A + + + M G P
Sbjct: 545 -----GAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFA 599
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+++ LC CGR+ +A +L EM + G+ T+N + R A++ + M+
Sbjct: 600 YNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQ 659
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L +P+I T+NILIG + M EI N + L D+ +Y +HG C +K
Sbjct: 660 RIGL-LPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKM 718
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A ++I G++P VT+ T+ G I SD+L L KL
Sbjct: 719 NQAVIILDQLISAGIVPDTVTYNTMLSG-ICSDILDRAMILTAKL 762
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 11/242 (4%)
Query: 25 RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84
+ +MI +G P+ +T+N ++ G CR + + E + M PDV
Sbjct: 233 KLFKDMIFKGPRPSNLTFNAMICGFCR----------QHRVVVGESLLHLMPKFMCSPDV 282
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
+F+I+++ + +++D L+ M G+ P+VAT+T+++ LC G + +A +L
Sbjct: 283 VTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDG 342
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
+ G++P+A YN Y ++ A LY +M+ + P+ T+NIL+
Sbjct: 343 IQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVS-PDCVTFNILVWGHYKYG 401
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
R++ + + S L LD Y +++ LC + EA + E++EKGL V F
Sbjct: 402 RIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFN 461
Query: 265 TL 266
+L
Sbjct: 462 SL 463
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 140/324 (43%), Gaps = 44/324 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +T++++ C+ + A + + + G+ PN YN L++G +
Sbjct: 315 PSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFK---------- 364
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A +++EMR G+ PD +F+I++ + + + + S L + G+ +
Sbjct: 365 AREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSL 424
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
Y +V LC GR+++A +LL E++ G++ S +N Y + A + YR M
Sbjct: 425 YDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMV 484
Query: 181 -----KEDDLC---------------------------VP-NIHTYNILIGMFMALNRMD 207
C P N Y +L+ + +N ++
Sbjct: 485 RCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLE 544
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ +W +K + D ++T LI GL + +EA + F+EM G +P + +L
Sbjct: 545 GAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLI 604
Query: 268 RGLIQSDMLRTWRRLKKKLDEESI 291
RGL + +L+K++ ++ +
Sbjct: 605 RGLCDCGRVTEALKLEKEMRQKGL 628
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 14/240 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y SLI G C R+ A + EM ++G+ + T+N++++G CRR +
Sbjct: 594 VPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQM----- 648
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A + F +M+ G+ PD+ +F+I++ Y +A + + +N M G+ P +
Sbjct: 649 -----KFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDIT 703
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY + + C ++ A +L +++ G+ P TYN + AM L ++
Sbjct: 704 TYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGI-CSDILDRAMILTAKL 762
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH-VKGSELGLDLDSYTMLIHGLCEKQ 239
+ +PN+ T N+L+ F M IW ++ G D SY +L C Q
Sbjct: 763 LKMGF-IPNVITTNMLLSHFCK-QGMPEKALIWGQKLREISFGFDEISYRILDQAYCLMQ 820
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 3/194 (1%)
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
E D + + +L + +L+ L M+ G+ P +++ T +++ L G +
Sbjct: 174 ESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWK 233
Query: 141 LLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
L +M+ G PS T+N + R + G L+ K +C P++ T+NILI
Sbjct: 234 LFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKF--MCSPDVVTFNILINA 291
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
R + + + + S + + ++T ++H LC + EA + F + + G+ P
Sbjct: 292 CCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPN 351
Query: 260 KVTFETLYRGLIQS 273
+ TL G ++
Sbjct: 352 AAIYNTLMDGYFKA 365
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 138/275 (50%), Gaps = 23/275 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +SL+ G K +++ A + + E GV PN+ YN L++ +C+
Sbjct: 330 PSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCK---------- 379
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ AE +FD M G+ P+ ++SI++ ++ R K +L L M + G+ P+V
Sbjct: 380 GRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYP 439
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C G I AE L+ EM+ + P+ TY Y + N A++LY +M
Sbjct: 440 YNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREI-----WNHVKGSELGLDLDSYTMLIHGL 235
+ VP+I+T+ L+ G+F A D V+ WN VK + + +Y ++I G
Sbjct: 500 GKGI-VPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN-VKPNRV-----TYNVMIEGY 552
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
CE+ +A ++ EMIEKG++P ++ L GL
Sbjct: 553 CEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGL 587
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 144/302 (47%), Gaps = 32/302 (10%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT L++G+C+ +++ A +M RGV+ ++V Y VL++G SL +R
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDG-----SLKHKDR------ 663
Query: 67 NAEKVF----DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
KVF EM RG++PD ++ ++ S+ + + + M +G P TY
Sbjct: 664 ---KVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMK 181
T+V+ LC G + +AE L +M P+ TY CF +G D A++L+ +
Sbjct: 721 TAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAIL 780
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L N TYN+LI F RM+ E+ + G + D +YT +I LC +
Sbjct: 781 KGLL--ANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDV 838
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL-----------IQSDMLRTWRRLKKKLDEES 290
K+A + + M EKG+ P +V + TL G ++++MLR + + E +
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETT 898
Query: 291 IT 292
I+
Sbjct: 899 IS 900
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 152/340 (44%), Gaps = 57/340 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT +I C++ + A+ + +M G + N+V YNVL++G+C++ +
Sbjct: 225 PDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGI 284
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K + E ++PDV ++ ++ + + ++ L+ ++ M P+ A
Sbjct: 285 KKDLAGKE----------LKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAA 334
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+S+V+ L G++E+A L+ + GVSP+ YN ++ + A L+ +M
Sbjct: 335 VSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMG 394
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVRE--------------------IWNHVKGSEL 221
+ LC PN TY+ILI MF ++D I H K ++
Sbjct: 395 KIGLC-PNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDI 453
Query: 222 GL---------------DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ +YT L+ G C K K +A + + EM KG++P TF TL
Sbjct: 454 SAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTL 513
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPYR 306
GL ++ ++R +++ +E ++ KP R
Sbjct: 514 LSGLFRAGLIR-----------DAVKLFTEMAEWNVKPNR 542
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 132/316 (41%), Gaps = 28/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +I G+C+ + A FL EMIE+G+ P+ +Y L++G+C + F
Sbjct: 540 PNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E + A V +M +RG++ D+ + +++ +
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLK 659
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ L L M ++G+ P YTS++ G ++A + M+ G P+ T
Sbjct: 660 HKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM-ALNRMDMVREIWNH 215
Y N A L +M+ + VPN TY + + + M E+ N
Sbjct: 720 YTAVINGLCKAGFVNEAEILCSKMRPGN-SVPNQVTYGCFLDILTKGVGDMKKAVELHNA 778
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ L + +Y MLI G C + + +EA + MI G+ P +T+ T+ L + +
Sbjct: 779 ILKGLLA-NTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRND 837
Query: 276 LRTWRRLKKKLDEESI 291
++ L + E+ I
Sbjct: 838 VKKAIELWNSMTEKGI 853
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 129/312 (41%), Gaps = 30/312 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y SLI G CK I AE + EMI + +EP VVTY L+ G C + ++ R
Sbjct: 435 PSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
IR+A K+F EM ++P+ ++++++ Y
Sbjct: 495 YHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + LN M EKGI P +Y ++ LC G+ +A+ + + + +
Sbjct: 555 EGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 157 YNCFFKEYRGRKDANGAMKLYRQM--KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
Y + A+ + + M + DL ++ Y +LI + + +
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQDMGLRGVDL---DLVCYGVLIDGSLKHKDRKVFLGLLK 671
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ L D YT +I + +KEA + MI +G +P +VT+ + GL ++
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731
Query: 275 MLRTWRRLKKKL 286
+ L K+
Sbjct: 732 FVNEAEILCSKM 743
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 106/264 (40%), Gaps = 46/264 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YTS+I K A MI G PN VTY ++NG+C+
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG-------- 731
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ AE + +MR P+ ++ L + ++ +L+ KG+ AT
Sbjct: 732 --FVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTAT 789
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C GR+E+A EL+ M+ +GVSP TY E R D A++L+ M
Sbjct: 790 YNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMT 849
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + R D V +Y LIHG C +
Sbjct: 850 EKGI-------------------RPDRV-----------------AYNTLIHGCCVAGEM 873
Query: 242 KEACQYFVEMIEKGLLPQKVTFET 265
+A + EM+ +GL P T ET
Sbjct: 874 GKATELRNEMLRQGLKPNTETSET 897
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 45/191 (23%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAE--------------------------RFLGEM---- 30
+PN YT++I G CK ++ AE + +G+M
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAV 773
Query: 31 -----IERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVT 85
I +G+ N TYN+L+ G CR+ R E+ A ++ M G+ PD
Sbjct: 774 ELHNAILKGLLANTATYNMLIRGFCRQG------RMEE----ASELITRMIGDGVSPDCI 823
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
+++ ++ R + + +++ N M EKGI P Y +++ C G + A EL EM
Sbjct: 824 TYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Query: 146 VRNGVSPSAET 156
+R G+ P+ ET
Sbjct: 884 LRQGLKPNTET 894
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 83/211 (39%), Gaps = 36/211 (17%)
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
P+V + S +LH + L+++ + M GI P V YT V++ LC + A+E+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
+ +M G C NI YN+LI
Sbjct: 250 IVQMEATG------------------------------------CDVNIVPYNVLIDGLC 273
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
++ I + G EL D+ +Y L+ GLC+ Q+++ + EM+ P +
Sbjct: 274 KKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEA 333
Query: 262 TFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+L GL + + L K++ E ++
Sbjct: 334 AVSSLVEGLRKRGKVEEALNLVKRVAEFGVS 364
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 147/299 (49%), Gaps = 46/299 (15%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMI----------------------------------- 31
Y +L+YG+C++ ++MA R +MI
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 330
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
+ G+ PNV YN L++ +C+ NERF+ +A+++F EM RG+EP+ +++I++
Sbjct: 331 DLGMVPNVFAYNALIDKLCK------NERFD----DADRLFKEMAGRGLEPNEVTYAILI 380
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
H + + +L + M++KGI TV Y S++ C G ++ A LL MV+ G++
Sbjct: 381 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 440
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P+A +Y+ D + M+L+R+M E + N +T+ LI F +MD
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN-YTFTALINGFCKDKKMDEAAR 499
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+++ + S + + ++ ++I G C ++A Q + +M+E GL P T+ +L GL
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 137/257 (53%), Gaps = 23/257 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +LI CK R D A+R EM RG+EPN VTY +L++ +C+R
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG------- 387
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK----LNFMKEKGIC 116
I +A +FD+MR +GI+ V ++ +++ Y + Q SLD+ L+ M ++G+
Sbjct: 388 ---MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCK----QGSLDRARGLLSGMVKEGLT 440
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
PT A+Y+ ++ LC G + EL EM G++ + T+ + K + A +L
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM--LIHG 234
+ +M + ++ +PN T+N++I + + + ++++ + E+GL D+YT LI G
Sbjct: 501 FDKMIDSNV-IPNEVTFNVMIEGYCLVGNIRKAFQLYDQM--VEMGLKPDNYTYRSLISG 557
Query: 235 LCEKQKWKEACQYFVEM 251
LC +A ++ ++
Sbjct: 558 LCLTSGVSKANEFVADL 574
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 136/328 (41%), Gaps = 62/328 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN + +I G+C + I A + +M+E G++P+ TY L++G+C + +
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569
Query: 61 FEKTIRNAEKV-------------------------FDEMRVRGIEPDVTSFSIVLHVYS 95
F + N+ V +DEM VRG++ D+ SF+I+++
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629
Query: 96 RAHKPQLSLDKLNFMKEKGI-----------------------------------CPTVA 120
+ H + S MKE+G+ P
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 689
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T ++ LC G + AE L EM+ V P+ TYNCF + D A L+ M
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L +I ++NILI ++ ++ + + S D SY+ +IH LC+
Sbjct: 750 LQGHLA--SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGD 807
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYR 268
+A + + EM+ KGL P V + R
Sbjct: 808 INKAFELWNEMLYKGLKPDVVAYNIFIR 835
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 118/285 (41%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y L+YG CK R+ A M+ GV + VTY L+ G CR E E +R
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM------EELEMALR 289
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ +M G P + S ++ + + + + + G+ P V Y +++
Sbjct: 290 ----ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 345
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC R +DA+ L EM G+ P+ TY R A+ L+ +M++ +
Sbjct: 346 DKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIK 405
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
V ++ YN LI + +D R + + + L SY+ LI GLC +
Sbjct: 406 V-TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCME 464
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM E+G+ TF L G + + RL K+ + ++
Sbjct: 465 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 141/300 (47%), Gaps = 21/300 (7%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+YT+ I +C+ +D A + M GV+ + V YNVL+ G+C+ N R +
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCK------NMR----V 249
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+ A +V + M G+ D ++ +++ + R + +++L + M G P+ A + +
Sbjct: 250 QEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFM 309
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ L +E+A L ++ G+ P+ YN + + + A +L+++M L
Sbjct: 310 IDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGL 369
Query: 186 CVPNIHTYNILIGMFMALNRMDMVRE---IWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
PN TY ILI AL + M+ + +++ ++ + + + Y LI+G C++
Sbjct: 370 -EPNEVTYAILI---HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
A M+++GL P ++ L GL ++ L + L +++ E I + NY F
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA----WNNYTF 481
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +T LI CK + AE EM+ V PN TYN L+
Sbjct: 686 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFAT---------- 735
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A+ + M ++G + SF+I++ +A K Q ++D ++ + E G P +
Sbjct: 736 EGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCIS 794
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ LC G I A EL EM+ G+ P YN F + +++ A+ +Y M
Sbjct: 795 YSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMI 854
Query: 182 EDDLCVPNIHTYNILI 197
+ PN TY L+
Sbjct: 855 RSGV-QPNWDTYRALL 869
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 123/292 (42%), Gaps = 13/292 (4%)
Query: 3 NVKMYTS--LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
V YT+ +++ KI + +A +M++ GV + Y + C
Sbjct: 160 TVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE--------- 210
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A + M G++ ++++++ + + Q +++ N M G+
Sbjct: 211 -SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V C +E A + +M+R G PS + E R ++ A L ++
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + VPN+ YN LI R D ++ + G L + +Y +LIH LC++
Sbjct: 330 GDLGM-VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM 388
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
++A F +M +KG+ + +L G + L R L + +E +T
Sbjct: 389 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 440
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 12/244 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT +I K + A +M+ G PN VT+ VL+N +C+ L
Sbjct: 651 PDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLG----- 705
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+AE + EM + P+ +++ L ++ + + D L+ +G ++ +
Sbjct: 706 -----SAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKD-LHSAMLQGHLASIVS 759
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++K LC G+I++A +L+ ++ +G SP +Y+ E D N A +L+ +M
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P++ YNI I D I+ ++ S + + D+Y L+ G+ +
Sbjct: 820 YKGL-KPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHY 878
Query: 242 KEAC 245
+C
Sbjct: 879 DFSC 882
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ ++ + LI G CK +I A + ++ E G P+ ++Y+ +++ +C+ + N+
Sbjct: 754 LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI--NKA 811
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
FE +++EM +G++PDV +++I + + + +L M G+ P
Sbjct: 812 FE--------LWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWD 863
Query: 121 TYTSVVK 127
TY +++
Sbjct: 864 TYRALLS 870
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 96/248 (38%), Gaps = 36/248 (14%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI + + S +L + + L+ D + M + G+ YT+ ++ C ++ A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ M GV SA YN A+++ M + + TY L+
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV-TYRTLVY 276
Query: 199 MFMALNRMDMVREIWNHV---------------------------------KGSELGL-- 223
F + ++M I + + K +LG+
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
++ +Y LI LC+ +++ +A + F EM +GL P +VT+ L L + M+ L
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396
Query: 284 KKLDEESI 291
K+ ++ I
Sbjct: 397 DKMRDKGI 404
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 12/198 (6%)
Query: 107 LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRG 166
L GI T + ++ L + A +L +M+++GV Y + Y
Sbjct: 151 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 210
Query: 167 RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
++ +GA L +M+ + + + YN+L+ R+ E+ N + + D
Sbjct: 211 SRNLDGARGLVVRMESEGVKASAV-PYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+Y L++G C ++ + A + +MI G +P + + D LR KK+L
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMI------DELR-----KKEL 318
Query: 287 DEESITFGSEFQNYHFKP 304
EE+ + + + P
Sbjct: 319 VEEAFSLACKLGDLGMVP 336
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 145/307 (47%), Gaps = 22/307 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LIYG CK ++ AE +LG+++ G+EP+ TYN L+ G C+
Sbjct: 284 PDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGG-------- 335
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ AE++ G PD ++ ++ + +L N KGI P V
Sbjct: 336 --MVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK---EYRGRKDANGAMKLYR 178
Y +++K L + G I +A +L EM G+ P +T+N + DA+G +K+
Sbjct: 394 YNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
P+I T+NILI + +M+ EI + + + + D+ +Y L++GLC+
Sbjct: 454 SKGY----FPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKT 509
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITF 293
K+++ + + M+EKG P TF L L + L L K ++ +++TF
Sbjct: 510 SKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTF 569
Query: 294 GSEFQNY 300
G+ +
Sbjct: 570 GTLIDGF 576
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 134/297 (45%), Gaps = 45/297 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y +LI G I A + EM E+G+ P V T+N+L+NG+C+
Sbjct: 389 PNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGC------- 441
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A+ + M +G PD+ +F+I++H YS K + +L+ L+ M + G+ P V T
Sbjct: 442 ---VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYT 498
Query: 122 YTSVVKCLCSCGRIEDAEE-----------------------------------LLGEMV 146
Y S++ LC + ED E LL EM
Sbjct: 499 YNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMK 558
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
V+P A T+ + D +GA L+R+M+E + + TYNI+I F +
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNV 618
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
M +++ + LG D +Y +++ G C+ ++ +EM+E G +P T
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTL 675
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 25/275 (9%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y +++ G+ + N D G+M+ GV + T+N LL+ +C++
Sbjct: 180 NVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGD-------- 231
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++ EK+ D++ RG+ P++ +++ + + + ++ + + ++G P V TY
Sbjct: 232 --VKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTY 289
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ LC + ++AE LG++V G+ P + TYN Y G M Q+ E
Sbjct: 290 NYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGY-----CKGGM---VQLAE 341
Query: 183 DDLC-------VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
L VP+ TY LI + ++N G + ++ Y LI GL
Sbjct: 342 RILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ EA Q EM EKGL+P+ TF L GL
Sbjct: 402 SNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGL 436
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 121/281 (43%), Gaps = 46/281 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y +++ D A + M +RG+ P+V ++ + + CR + H
Sbjct: 109 PTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHA---- 164
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ + M +G E +V ++ V+ + + + M G+ ++T
Sbjct: 165 ------ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLST 218
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G +++ E+LL ++++ GV P+ TYN F + + + + A+++ ++
Sbjct: 219 FNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLI 278
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D P++ TYN LI+GLC+ K+
Sbjct: 279 -DQGPKPDVVTYN-----------------------------------YLIYGLCKNSKF 302
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+EA Y +++ +GL P T+ TL G + M++ R+
Sbjct: 303 QEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERI 343
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 111/270 (41%), Gaps = 51/270 (18%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
EP V +YN ++ + L + F++ A KV+ MR RGI PDV SF+I + +
Sbjct: 108 EPTVFSYNAIM------SILVDSGYFDQ----AHKVYMRMRDRGITPDVYSFTIRMKSFC 157
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
R +P +L LN M +G V Y +VV ++ EL G+M+ +GVS
Sbjct: 158 RTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLS 217
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
T+N + D KL ++ + + +PN+ TYN I
Sbjct: 218 TFNKLLHVLCKKGDVKECEKLLDKVIKRGV-LPNLFTYNFFI------------------ 258
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL----- 270
GLC+K + A + +I++G P VT+ L GL
Sbjct: 259 -----------------QGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSK 301
Query: 271 IQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
Q + + + + L+ +S T+ + Y
Sbjct: 302 FQEAEVYLGKLVNEGLEPDSFTYNTLIAGY 331
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 30/181 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PN+ + L+ C+ +++D A L EM + V P+ VT+ L++G C+ L
Sbjct: 529 PNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 58 ------------------------NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
E+ T+ AEK+F EM R + PD ++ +++
Sbjct: 589 FRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTM--AEKLFQEMVDRCLGPDGYTYRLMVDG 646
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ + L L M E G P++ T V+ CLC R+ +A ++ MV+ G+ P
Sbjct: 647 FCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Query: 154 A 154
A
Sbjct: 707 A 707
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 1/197 (0%)
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Y R K Q +++ M PTV +Y +++ L G + A ++ M G++P
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
++ K + + A++L M C N+ Y ++G F N D E++
Sbjct: 146 VYSFTIRMKSFCRTSRPHAALRLLNNMSSQG-CEMNVVAYCTVVGGFYEENFKDEGYELF 204
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ S + L L ++ L+H LC+K KE + ++I++G+LP T+ +GL Q
Sbjct: 205 GKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQK 264
Query: 274 DMLRTWRRLKKKLDEES 290
L R+ +L ++
Sbjct: 265 GELDAAVRMVGRLIDQG 281
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 100 PQLSLDKLNFM-KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETY 157
P +L+ N M KE G T++TY S+++ L G+ E EE+L +M +N G Y
Sbjct: 20 PMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVY 79
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
K Y + A+ ++ +M D C P + +YN ++ + + D +++ ++
Sbjct: 80 VGAMKNYGRKGKVQEAVNVFERMDFYD-CEPTVFSYNAIMSILVDSGYFDQAHKVYMRMR 138
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ D+ S+T+ + C + A + M +G V + T+ G + +
Sbjct: 139 DRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 147/299 (49%), Gaps = 46/299 (15%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMI----------------------------------- 31
Y +L+YG+C++ ++MA R +MI
Sbjct: 294 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 353
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
+ G+ PNV YN L++ +C+ NERF+ +A+++F EM RG+EP+ +++I++
Sbjct: 354 DLGMVPNVFAYNALIDKLCK------NERFD----DADRLFKEMAGRGLEPNEVTYAILI 403
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
H + + +L + M++KGI TV Y S++ C G ++ A LL MV+ G++
Sbjct: 404 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 463
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P+A +Y+ D + M+L+R+M E + N +T+ LI F +MD
Sbjct: 464 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN-YTFTALINGFCKDKKMDEAAR 522
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+++ + S + + ++ ++I G C ++A Q + +M+E GL P T+ +L GL
Sbjct: 523 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 581
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 137/257 (53%), Gaps = 23/257 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +LI CK R D A+R EM RG+EPN VTY +L++ +C+R
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG------- 410
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK----LNFMKEKGIC 116
I +A +FD+MR +GI+ V ++ +++ Y + Q SLD+ L+ M ++G+
Sbjct: 411 ---MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCK----QGSLDRARGLLSGMVKEGLT 463
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
PT A+Y+ ++ LC G + EL EM G++ + T+ + K + A +L
Sbjct: 464 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 523
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM--LIHG 234
+ +M + ++ +PN T+N++I + + + ++++ + E+GL D+YT LI G
Sbjct: 524 FDKMIDSNV-IPNEVTFNVMIEGYCLVGNIRKAFQLYDQM--VEMGLKPDNYTYRSLISG 580
Query: 235 LCEKQKWKEACQYFVEM 251
LC +A ++ ++
Sbjct: 581 LCLTSGVSKANEFVADL 597
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 136/328 (41%), Gaps = 62/328 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN + +I G+C + I A + +M+E G++P+ TY L++G+C + +
Sbjct: 533 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 592
Query: 61 FEKTIRNAEKV-------------------------FDEMRVRGIEPDVTSFSIVLHVYS 95
F + N+ V +DEM VRG++ D+ SF+I+++
Sbjct: 593 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 652
Query: 96 RAHKPQLSLDKLNFMKEKGI-----------------------------------CPTVA 120
+ H + S MKE+G+ P
Sbjct: 653 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 712
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T ++ LC G + AE L EM+ V P+ TYNCF + D A L+ M
Sbjct: 713 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 772
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L +I ++NILI ++ ++ + + S D SY+ +IH LC+
Sbjct: 773 LQGHLA--SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGD 830
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYR 268
+A + + EM+ KGL P V + R
Sbjct: 831 INKAFELWNEMLYKGLKPDVVAYNIFIR 858
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 118/285 (41%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y L+YG CK R+ A M+ GV + VTY L+ G CR E E +R
Sbjct: 259 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM------EELEMALR 312
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ +M G P + S ++ + + + + + G+ P V Y +++
Sbjct: 313 ----ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 368
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC R +DA+ L EM G+ P+ TY R A+ L+ +M++ +
Sbjct: 369 DKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIK 428
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
V ++ YN LI + +D R + + + L SY+ LI GLC +
Sbjct: 429 V-TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCME 487
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM E+G+ TF L G + + RL K+ + ++
Sbjct: 488 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 532
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 141/300 (47%), Gaps = 21/300 (7%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+YT+ I +C+ +D A + M GV+ + V YNVL+ G+C+ N R +
Sbjct: 223 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCK------NMR----V 272
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+ A +V + M G+ D ++ +++ + R + +++L + M G P+ A + +
Sbjct: 273 QEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFM 332
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ L +E+A L ++ G+ P+ YN + + + A +L+++M L
Sbjct: 333 IDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGL 392
Query: 186 CVPNIHTYNILIGMFMALNRMDMVRE---IWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
PN TY ILI AL + M+ + +++ ++ + + + Y LI+G C++
Sbjct: 393 -EPNEVTYAILI---HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 448
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
A M+++GL P ++ L GL ++ L + L +++ E I + NY F
Sbjct: 449 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA----WNNYTF 504
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +T LI CK + AE EM+ V PN TYN L+
Sbjct: 709 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFAT---------- 758
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A+ + M ++G + SF+I++ +A K Q ++D ++ + E G P +
Sbjct: 759 EGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCIS 817
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ LC G I A EL EM+ G+ P YN F + +++ A+ +Y M
Sbjct: 818 YSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMI 877
Query: 182 EDDLCVPNIHTYNILI 197
+ PN TY L+
Sbjct: 878 RSGV-QPNWDTYRALL 892
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 123/292 (42%), Gaps = 13/292 (4%)
Query: 3 NVKMYTS--LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
V YT+ +++ KI + +A +M++ GV + Y + C
Sbjct: 183 TVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE--------- 233
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A + M G++ ++++++ + + Q +++ N M G+
Sbjct: 234 -SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 292
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V C +E A + +M+R G PS + E R ++ A L ++
Sbjct: 293 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 352
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + VPN+ YN LI R D ++ + G L + +Y +LIH LC++
Sbjct: 353 GDLGM-VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM 411
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
++A F +M +KG+ + +L G + L R L + +E +T
Sbjct: 412 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 463
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 107/234 (45%), Gaps = 12/234 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT +I K + A +M+ G PN VT+ VL+N +C+ L
Sbjct: 674 PDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLG----- 728
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+AE + EM + P+ +++ L ++ + + D L+ +G ++ +
Sbjct: 729 -----SAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKD-LHSAMLQGHLASIVS 782
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++K LC G+I++A +L+ ++ +G SP +Y+ E D N A +L+ +M
Sbjct: 783 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 842
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
L P++ YNI I D I+ ++ S + + D+Y L+ G+
Sbjct: 843 YKGL-KPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ ++ + LI G CK +I A + ++ E G P+ ++Y+ +++ +C+ + N+
Sbjct: 777 LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI--NKA 834
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
FE +++EM +G++PDV +++I + + + +L M G+ P
Sbjct: 835 FE--------LWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWD 886
Query: 121 TYTSVVK 127
TY +++
Sbjct: 887 TYRALLS 893
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 96/248 (38%), Gaps = 36/248 (14%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI + + S +L + + L+ D + M + G+ YT+ ++ C ++ A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ M GV SA YN A+++ M + + TY L+
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV-TYRTLVY 299
Query: 199 MFMALNRMDMVREIWNHV---------------------------------KGSELGL-- 223
F + ++M I + + K +LG+
Sbjct: 300 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 359
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
++ +Y LI LC+ +++ +A + F EM +GL P +VT+ L L + M+ L
Sbjct: 360 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 419
Query: 284 KKLDEESI 291
K+ ++ I
Sbjct: 420 DKMRDKGI 427
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 12/198 (6%)
Query: 107 LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRG 166
L GI T + ++ L + A +L +M+++GV Y + Y
Sbjct: 174 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 233
Query: 167 RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
++ +GA L +M+ + + + YN+L+ R+ E+ N + + D
Sbjct: 234 SRNLDGARGLVVRMESEGVKASAV-PYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 292
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+Y L++G C ++ + A + +MI G +P + + D LR KK+L
Sbjct: 293 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMI------DELR-----KKEL 341
Query: 287 DEESITFGSEFQNYHFKP 304
EE+ + + + P
Sbjct: 342 VEEAFSLACKLGDLGMVP 359
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 162/338 (47%), Gaps = 44/338 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-E 59
+P+VK+YT L+ C RI+ A R L M E G P+ VTY V L+G+C+ +
Sbjct: 246 VPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFH 305
Query: 60 RFE----------------------KTIRNAEKV--FDEMRVRGIEPDVTSFSIVLHVYS 95
RFE + R E + + EM + I PD+T ++I++ ++
Sbjct: 306 RFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFA 365
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
A + + + L+ MK+KG P Y +++K L G I+ A+ L+ EM++N V +
Sbjct: 366 EAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDST 425
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI------GMF----MALNR 205
T+N + + AM+++ +M E C P + TYN LI GM M ++
Sbjct: 426 THNIMICGLCKKGLIDKAMQVFDEMGEHG-CHPTVMTYNALIDGLYRAGMLEEARMLFHK 484
Query: 206 MDMVREIWNHVK---GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
M+M ++ G+ D +S L+ G+C+ + +A + +IE G++P VT
Sbjct: 485 MEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVT 544
Query: 263 FETLYRGLIQSDMLRTWRRLKKKL-----DEESITFGS 295
+ TL GL ++ L RL K+L + IT+G+
Sbjct: 545 YNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGT 582
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 130/287 (45%), Gaps = 11/287 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y L+ G CK A + EM+ERG+ P+V Y VLL+ +C
Sbjct: 211 LPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCN--------- 261
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I +A ++ M+ G PD ++++ L +A + + + +++ G +
Sbjct: 262 -EGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLI 320
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y+ ++ L GR ++ EM+ +SP Y + + A L +M
Sbjct: 321 GYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEM 380
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K+ VP+ YN L+ + +D + + + + + + LD ++ ++I GLC+K
Sbjct: 381 KDKGF-VPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGL 439
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+A Q F EM E G P +T+ L GL ++ ML R L K++
Sbjct: 440 IDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKME 486
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 114/298 (38%), Gaps = 46/298 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +Y ++ I +A M+ G PN TY VL++G+C+R
Sbjct: 177 PTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRG-------- 228
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+FDEM E+GI P V
Sbjct: 229 --MAVDALKMFDEML-----------------------------------ERGIVPDVKI 251
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ LC+ GRIEDA LL M NG P TY F + A + ++
Sbjct: 252 YTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQ 311
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + I ++ G+F A R D + + G + D+ YT+LI E +
Sbjct: 312 DGGFTLGLIGYSCLIDGLFQA-GRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRT 370
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
K+A EM +KG +P + TL + L + + L ++ + ++ S N
Sbjct: 371 KDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHN 428
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 4/210 (1%)
Query: 67 NAEKVFDEM---RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+A +FD + R G+ +F ++ +S A + Q +++ + M + PT Y
Sbjct: 124 DAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYN 183
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
+V + L G I A L MV +G P++ TY R A A+K++ +M E
Sbjct: 184 AVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLER 243
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
+ VP++ Y +L+ R++ + +K + D +YT+ + GLC+ + E
Sbjct: 244 GI-VPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDE 302
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
A F + + G + + L GL Q+
Sbjct: 303 AFHRFELLQDGGFTLGLIGYSCLIDGLFQA 332
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 120/294 (40%), Gaps = 54/294 (18%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-------RASLHPNER-- 60
+I G CK ID A + EM E G P V+TYN L++G+ R R H E
Sbjct: 430 MICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGN 489
Query: 61 ----FEKTIRNAEKVFDEMRVR-------------------------GIEPDVTSFSIVL 91
F + A +V D +R G+ PDV +++ ++
Sbjct: 490 NPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLI 549
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ +A +L ++ KGI P TY +++ L R DA L ++R+G
Sbjct: 550 NGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGF 609
Query: 152 PSAETYNCFFKEYRGRKDANGAMKL--------YRQMKEDDLCVPNIHTYNILIGMFMAL 203
PS YN + K + A+ L Y ED++ + F+
Sbjct: 610 PSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFE---DGFLDE 666
Query: 204 NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
++++ + V GS L+ + YT+ + GLC+ +K +A + F + E G++
Sbjct: 667 TVKELIK--IDQVYGS---LNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIV 715
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR 51
+P+V Y +LI G CK +D A R E+ +G+ P+ +TY L++G+ R
Sbjct: 539 VPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWR 589
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 143/273 (52%), Gaps = 11/273 (4%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82
+R G++I G+ NV +YN+++N CR K + NA + F +M+VRG+ P
Sbjct: 413 GDRVYGQLISDGLISNVFSYNMIINCFCR----------AKLMDNASEAFRDMQVRGVVP 462
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
++ +F+ +++ + + + L + E G+ P + T++S+V LC R E+A E
Sbjct: 463 NLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECF 522
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
EM+ G++P+A YN + D ++KL R+M+++ + P+ ++YN LI +F
Sbjct: 523 TEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGIS-PDTYSYNALIQIFCR 581
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
+N+++ +++++ + S L D +Y+ I L E + +EA + F M G P
Sbjct: 582 MNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYI 641
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
+ + L+Q + + + + ++ ++ I+ S
Sbjct: 642 CNLIIKILVQQEYVEEAQNIIERCRQKGISLNS 674
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ NV Y +I +C+ +D A +M RGV PN+VT+N L+NG C+
Sbjct: 426 ISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCK--------- 476
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ I A K+ + + G++PD+ +FS ++ + + + +L+ M E GI P
Sbjct: 477 -DGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAV 535
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ LC+ G + + +LL M + G+SP +YN + + A KL+ M
Sbjct: 536 IYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSM 595
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM-LIHGLCEKQ 239
L P+ +TY+ I R++ ++++ ++ + G DSY LI + +Q
Sbjct: 596 SRSGLN-PDNYTYSAFIEALSESGRLEEAKKMFYSMEAN--GCSPDSYICNLIIKILVQQ 652
Query: 240 KWKEACQYFVE 250
++ E Q +E
Sbjct: 653 EYVEEAQNIIE 663
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 147/323 (45%), Gaps = 35/323 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT LI G+C +R+D A M + GV PN T L++GV R + P++
Sbjct: 247 PNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFR--CVDPSKAL 304
Query: 62 EKTIRNAEKVFDEMRVR--------------------------------GIEPDVTSFSI 89
E ++ ++ RV G P + F++
Sbjct: 305 ELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNV 364
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
V+ + + + + D ++++G+ + Y ++++ L E+ + + G+++ +G
Sbjct: 365 VMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDG 424
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
+ + +YN + K + A + +R M+ + VPN+ T+N LI +D
Sbjct: 425 LISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGV-VPNLVTFNTLINGHCKDGAIDKA 483
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
R++ + + L D+ +++ ++ GLC+ ++ +EA + F EMIE G+ P V + L R
Sbjct: 484 RKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRS 543
Query: 270 LIQSDMLRTWRRLKKKLDEESIT 292
L + +L +++ +E I+
Sbjct: 544 LCTIGDVARSVKLLRRMQKEGIS 566
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 116/228 (50%), Gaps = 15/228 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ + +LI G CK ID A + L ++E G++P++ T++ +++G+C+
Sbjct: 461 VPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQI-------- 512
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K A + F EM GI P+ ++I++ S+ L M+++GI P
Sbjct: 513 --KRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTY 570
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y ++++ C ++E A++L M R+G++P TY+ F + A K++ M
Sbjct: 571 SYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSM 630
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV-KGSELGLDLDS 227
E + C P+ + N++I + + + + V E N + + + G+ L+S
Sbjct: 631 -EANGCSPDSYICNLIIKILV---QQEYVEEAQNIIERCRQKGISLNS 674
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 128/311 (41%), Gaps = 61/311 (19%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI+G CK+ +D A R + +M ++G PNV TY +L+ G C +
Sbjct: 217 YNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFC----------IASRVD 266
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL-------------DKLNFM--- 110
A VF+ M+ G+ P+ + ++H R P +L ++++FM
Sbjct: 267 EAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLAC 326
Query: 111 -------------KE-----------KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
KE G P + + V+ CL + + ++ +
Sbjct: 327 DTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILR 386
Query: 147 RNGVSPSAETYNCFFK-----EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
+ GV Y + E+R D ++Y Q+ D L + N+ +YN++I F
Sbjct: 387 KQGVKAGIGAYLALIEVLYKNEWREEGD-----RVYGQLISDGL-ISNVFSYNMIINCFC 440
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
MD E + ++ + +L ++ LI+G C+ +A + ++E GL P
Sbjct: 441 RAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIF 500
Query: 262 TFETLYRGLIQ 272
TF ++ GL Q
Sbjct: 501 TFSSIVDGLCQ 511
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 126/334 (37%), Gaps = 59/334 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P ++Y +LI K N ID+A +M + TYN L++GVC+
Sbjct: 177 PTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVG-------- 228
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++ +M+ +G P+V ++++++ + A + + MK+ G+ P AT
Sbjct: 229 --VVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEAT 286
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMV----------------------------------- 146
++V + C A ELL E +
Sbjct: 287 VRALVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFL 346
Query: 147 -----RNGVSPSAETYN----CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
R G P +N C K R+ + L +Q + I Y LI
Sbjct: 347 RRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVK-----AGIGAYLALI 401
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
+ + ++ + L ++ SY M+I+ C + A + F +M +G++
Sbjct: 402 EVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVV 461
Query: 258 PQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
P VTF TL G + + R+L + L E +
Sbjct: 462 PNLVTFNTLINGHCKDGAIDKARKLLESLLENGL 495
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 2/142 (1%)
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G+SP+ YN + A ++QM D+ CV + TYN LI + +D
Sbjct: 174 GLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADN-CVADRFTYNTLIHGVCKVGVVDE 232
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+ +K ++ +YTMLI G C + EA F M + G+ P + T L
Sbjct: 233 ALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVH 292
Query: 269 GLIQS-DMLRTWRRLKKKLDEE 289
G+ + D + L + LD E
Sbjct: 293 GVFRCVDPSKALELLSEFLDRE 314
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 10/151 (6%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+ +L+ W ++ + + ++ G+ P YN L++ + + S I
Sbjct: 146 LLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNS----------I 195
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
A F +M D +++ ++H + +L + MK+KG P V TYT +
Sbjct: 196 DLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTML 255
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ C R+++A + M +GV P+ T
Sbjct: 256 IEGFCIASRVDEAFGVFETMKDSGVYPNEAT 286
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/215 (18%), Positives = 88/215 (40%), Gaps = 6/215 (2%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
+ VF ++ G+ P ++ ++ +++ L+ K M TY +++
Sbjct: 163 SAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIH 222
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
+C G +++A L+ +M G P+ TY + + + A ++ MK D
Sbjct: 223 GVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMK-DSGVY 281
Query: 188 PNIHTYNILI-GMFMALN---RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
PN T L+ G+F ++ ++++ E + + E + + +++ L KE
Sbjct: 282 PNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKE 341
Query: 244 ACQYFVEMIEK-GLLPQKVTFETLYRGLIQSDMLR 277
+ ++ + G P F + L++ LR
Sbjct: 342 MVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELR 376
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 149/304 (49%), Gaps = 30/304 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +L GWC+ A L +M E GV P TYN++L G R
Sbjct: 195 PDVVTYNTLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIILKGFFRAGQ------- 247
Query: 62 EKTIRNAEKVFDEMRVRGI-----EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
I++A F +M+ RG +PD+ S++ ++H A + + + M ++G
Sbjct: 248 ---IQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCT 304
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P+VATY ++++ +C G +EDA + +MVR P+ TY + + AMKL
Sbjct: 305 PSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKL 364
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV-KGSELGLDLDSYTMLIHGL 235
+MK + C P + TYN+LI ++ ++ + KG + + D+Y ++I +
Sbjct: 365 MERMKGEG-CEPVVQTYNVLIRYSFEEGEIEKALCLFERMSKGEDCLPNQDTYNIIISAM 423
Query: 236 CEKQKWKE---ACQYFVEMIEKGLLPQKVTFETLYRGL-------IQSDMLR---TWRRL 282
+++ ++ A + +EM+E+G LP++ + GL I D+LR +RRL
Sbjct: 424 FVRKRAEDMATAARMVMEMVERGYLPRRFMLNRVLNGLMLTGNQQISRDLLRMQEKYRRL 483
Query: 283 KKKL 286
++++
Sbjct: 484 RREI 487
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 4/163 (2%)
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
E+ P V TY ++ C A +LL +M +GV+P+ TYN K +
Sbjct: 190 ERRFPPDVVTYNTLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIILKGFFRAGQIQ 249
Query: 172 GAMKLYRQMKE----DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS 227
A + QMK+ D+ C P+I +Y +I ++D R++++ + + +
Sbjct: 250 HAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVAT 309
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
Y LI +C+K ++A F +M+ K +P VT+ L RGL
Sbjct: 310 YNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYTVLIRGL 352
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLL 46
MPNV YT LI G C + +ID A + + M G EP V TYNVL+
Sbjct: 339 MPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLI 384
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 124/234 (52%), Gaps = 11/234 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y ++ GWC I R L EM+ERG+ PN+ TYN +L G R IR
Sbjct: 192 YNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQ----------IR 241
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + F EM+ R E DV +++ V+H + A + + + + + M +G+ P+VATY +++
Sbjct: 242 HAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMI 301
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ LC +E+A + EMVR G P+ TYN + + + +L ++M E++ C
Sbjct: 302 QVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM-ENEGC 360
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
PN TYN++I + + ++ ++ + + +LD+Y +LI G+ +++
Sbjct: 361 EPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKR 414
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 12/209 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +++ G+ + +I A F EM +R E +VVTY +++G
Sbjct: 222 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE------- 274
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I+ A VFDEM G+ P V +++ ++ V + + ++ M +G P V T
Sbjct: 275 ---IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTT 331
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ L G EEL+ M G P+ +TYN + Y + A+ L+ +M
Sbjct: 332 YNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMG 391
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMV 209
D C+PN+ TYNILI GMF+ DMV
Sbjct: 392 SGD-CLPNLDTYNILISGMFVRKRSEDMV 419
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 127/270 (47%), Gaps = 14/270 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++ + +++ CK R++ A + R + VTYNV+LNG C +R
Sbjct: 154 DLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLI------KRTP 206
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
KT+ +V EM RGI P++T+++ +L + RA + + + + MK++ V TY
Sbjct: 207 KTL----EVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 262
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+VV G I+ A + EM+R GV PS TYN + + + A+ ++ +M
Sbjct: 263 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 322
Query: 183 DDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
PN+ TYN+LI G+F A E+ ++ + +Y M+I E +
Sbjct: 323 RGY-EPNVTTYNVLIRGLFHA-GEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEV 380
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
++A F +M LP T+ L G+
Sbjct: 381 EKALGLFEKMGSGDCLPNLDTYNILISGMF 410
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 11/226 (4%)
Query: 49 VCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
+ R LHP + MR I P +F+IV Y+ A KP ++
Sbjct: 94 IAARLHLHPT---------VWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFL 144
Query: 109 FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168
M E G +A++ +++ LC R+E A EL +R S TYN + K
Sbjct: 145 NMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIK 203
Query: 169 DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
+++ ++M E + PN+ TYN ++ F ++ E + +K + +D+ +Y
Sbjct: 204 RTPKTLEVLKEMVERGIN-PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 262
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
T ++HG + K A F EMI +G+LP T+ + + L + D
Sbjct: 263 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKD 308
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y ++I CK + ++ A EM+ RG EPNV TYNVL+ G+ H E
Sbjct: 291 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL-----FHAGE- 344
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E++ M G EP+ ++++++ YS + + +L M P +
Sbjct: 345 ----FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLD 400
Query: 121 TYTSVVKCLCSCGRIED 137
TY ++ + R ED
Sbjct: 401 TYNILISGMFVRKRSED 417
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 150/304 (49%), Gaps = 17/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V ++T+LI G+ K R+D A L EM ++ ++V YNV ++ +
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK------- 253
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K F E+ G++PD +++ ++ V +A++ +++ +++ P
Sbjct: 254 ---VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ S G+ ++A LL G PS YNC R + A++++ +MK
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK 370
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+D PN+ TYNILI M ++D E+ + ++ + L ++ + +++ LC+ QK
Sbjct: 371 KD--AAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKKKLDEE----SITFGSE 296
EAC F +M K P ++TF +L GL + + ++ +K LD + SI + S
Sbjct: 429 DEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSL 488
Query: 297 FQNY 300
+N+
Sbjct: 489 IKNF 492
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 122/273 (44%), Gaps = 46/273 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + Y+ LI+G K + M E+G + YN++++G C+
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK------ 602
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++ +EM+ +G EP V ++ V+ ++ + + K K I V
Sbjct: 603 ----VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y+S++ GRI++A +L E+++ G++P+ T+N ++ N A+ ++ M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
KE C PN TY ILI +GLC+ +K
Sbjct: 719 KELK-CTPNQVTYGILI-----------------------------------NGLCKVRK 742
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ +A ++ EM ++G+ P +++ T+ GL ++
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKA 775
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 17/300 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y ++ K+ ++D A R EM ++ PN+ TYN+L++ +CR L
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDC--- 395
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++ D M+ G+ P+V + +I++ ++ K + M K P
Sbjct: 396 -------AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEI 448
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ S++ L GR++DA ++ +M+ + ++ Y K + K+Y+ M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P++ N + + R ++ +K D SY++LIHGL +
Sbjct: 509 VNQN-CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGF 567
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
E + F M E+G + + + G + + +L K + +T+GS
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV +Y+SLI G+ K+ RID A L E++++G+ PNV T+N LL+ + +
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVK----------A 705
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ I A F M+ P+ ++ I+++ + K + M+++G+ P+ +Y
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ L G I +A L NG P + YN + A A L+ + +
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825
Query: 183 DDLCVPN 189
L + N
Sbjct: 826 RGLHIHN 832
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 17/283 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVT-YNVLLNGVCRRASLHPNERFEKTI 65
Y SL+ + D ++ LGEM G P+V T ++L+ C +A+ +
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLS--CVKAN---------KL 149
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
R V MR P ++++ ++ +S + + L M+E G PTV +T++
Sbjct: 150 REGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTL 209
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
++ GR++ A LL EM + + YN + + A K + +++ + L
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
P+ TY +IG+ NR+D E++ H++ + +Y +I G K+ EA
Sbjct: 270 -KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 246 QYFVEMIEKGLLPQKVTFE---TLYRGLIQSD-MLRTWRRLKK 284
KG +P + + T R + + D LR + +KK
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKK 371
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 110/268 (41%), Gaps = 46/268 (17%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ + Y +I G+CK +++ A + L EM +G EP VVTY +++G+ + L
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD------ 639
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A +F+E + + IE +V +S ++ + + + + L + +KG+ P V T+
Sbjct: 640 ----EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTW 695
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S++ L AEE+ N A+ ++ MKE
Sbjct: 696 NSLLDALVK------AEEI-----------------------------NEALVCFQSMKE 720
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C PN TY ILI + + + W ++ + SYT +I GL +
Sbjct: 721 LK-CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA 779
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA F G +P + + GL
Sbjct: 780 EAGALFDRFKANGGVPDSACYNAMIEGL 807
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 76/196 (38%), Gaps = 38/196 (19%)
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET------------------- 156
CP +Y S++ + C + +++LGEM G PS T
Sbjct: 97 CPE--SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFD 154
Query: 157 ----------------YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
Y + ++ + L++QM+E P +H + LI F
Sbjct: 155 VVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY-EPTVHLFTTLIRGF 213
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
R+D + + +K S L D+ Y + I + K A ++F E+ GL P +
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 261 VTFETLYRGLIQSDML 276
VT+ ++ L +++ L
Sbjct: 274 VTYTSMIGVLCKANRL 289
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y LI G CK+ + + A F EM ++G++P+ ++Y +++G+ + +
Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN------- 777
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
I A +FD + G PD ++ ++ S ++ ++D + +E
Sbjct: 778 ---IAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNR---AMDAFSLFEE 822
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + +LI+G CK + A + +M G PN++TY LL+G C++ L
Sbjct: 378 PDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLE----- 432
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V +EM +G E ++ ++++L + K +LD L M +KG P + T
Sbjct: 433 -----EAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFT 487
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ LC R EDA L +M+ +GV + TYN + A+KL M
Sbjct: 488 FNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDML 547
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C + TYN LI F L + +++ + +L S +LI+GLC K
Sbjct: 548 FRG-CPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKV 606
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + +MI +GL P VT+ +L GL + +R L KL E I
Sbjct: 607 CNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGI 656
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 136/327 (41%), Gaps = 58/327 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---- 56
+P+V + +IYG C++NRI + + M+ RG PN +TY VL+NG+CR +
Sbjct: 275 LPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQV 334
Query: 57 -------PNE-RFEKTIRNAEK----------VFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
PN+ F I K ++D+M G PDV +F+ ++H +
Sbjct: 335 LLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKG 394
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTS---------------------------------- 124
++D +N M G P + TYT+
Sbjct: 395 LMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYN 454
Query: 125 -VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
+++ LC G++ A ++LGEM G P T+N A+ LYR M D
Sbjct: 455 VLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLD 514
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
+ + N TYN LI F+ + ++ N + LD +Y LI C+ ++
Sbjct: 515 GV-IANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEK 573
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGL 270
A F EM+ K L+P ++ L GL
Sbjct: 574 ALGLFDEMVRKDLVPSNISCNLLINGL 600
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 129/265 (48%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YT+L+ G+CK N+++ A L EM +G E N++ YNVLL +C+
Sbjct: 413 PNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGK------- 465
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + EM +G +PD+ +F+ ++ + + + +L M G+ T
Sbjct: 466 ---VPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVT 522
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ G I++A +L+ +M+ G TYN K + A+ L+ +M
Sbjct: 523 YNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMV 582
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
DL VP+ + N+LI + ++ E+ + L D+ +Y LI+GLC+
Sbjct: 583 RKDL-VPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNI 641
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+EA F ++ +G+ P +T+ TL
Sbjct: 642 REAFNLFNKLQAEGIQPDAITYNTL 666
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 126/275 (45%), Gaps = 16/275 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +Y +LI+ K +R++ A + L EM G P+V T+N ++ G+CR +H
Sbjct: 240 VPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIH---- 295
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K+ D M RG P+ ++ ++++ R K +D+ + K P
Sbjct: 296 ------EGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGK----VDEAQVLLNKVPTPNDV 345
Query: 121 TYTSVVKCLCSCGRIEDAEELL-GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+T ++ GR+++A L +M++NG P T+N + A+ +
Sbjct: 346 HFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVND 405
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + C PN+ TY L+ F N+++ + N + L++ Y +L+ LC+
Sbjct: 406 MSANG-CTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNG 464
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
K +A EM +KG P TF TL GL + D
Sbjct: 465 KVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVD 499
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 115/276 (41%), Gaps = 16/276 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P K Y ++ N +A EM+ +GV P V T+ V++ +C NE
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMV-----NE-- 223
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ NA + +M G P+ + ++H S+ + +L L M G P V T
Sbjct: 224 ---VDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDT 280
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ V+ LC RI + +L+ M+ G +P+ TY + A L ++
Sbjct: 281 FNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP 340
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVRE-IWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
PN + ILI ++ R+D +++ + + D+ ++ LIHGLC+K
Sbjct: 341 -----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGL 395
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
A +M G P +T+ TL G + + L
Sbjct: 396 MGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQL 431
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 5/206 (2%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+ D V EP S+++VL + A+ P ++ + M KG+ PTV T+ V+K LC
Sbjct: 160 LLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALC 219
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
+++A LL +M ++G P++ Y R N A+KL +M C+P++
Sbjct: 220 MVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMG-CLPDV 278
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
T+N +I LNR+ ++ + + + +Y +L++GLC K EA
Sbjct: 279 DTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEA----QV 334
Query: 251 MIEKGLLPQKVTFETLYRGLIQSDML 276
++ K P V F L G ++S L
Sbjct: 335 LLNKVPTPNDVHFTILINGYVKSGRL 360
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + +LI+G CK++R + A +M+ GV N VTYN L++ R ++ +
Sbjct: 483 PDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKL 542
Query: 62 EKTI-------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ A +FDEM + + P S +++++ R
Sbjct: 543 VNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCR 602
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K +L+ L M +G+ P V TY S++ LC G I +A L ++ G+ P A T
Sbjct: 603 VGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAIT 662
Query: 157 YNCFFKEY-RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
YN + R + + L R + ++ +PN T+ IL+ F+
Sbjct: 663 YNTLICWHCRAGMFDDAYLLLLRGV--ENAFIPNDVTWYILVSNFI 706
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 81/177 (45%), Gaps = 2/177 (1%)
Query: 111 KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
+KG C T Y ++ L + + ++LL ++ G++ + C K Y GR +
Sbjct: 94 SQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMK-YYGRANL 152
Query: 171 NG-AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
G A ++ MK C P +YN+++ + ++ N + ++ + + + ++
Sbjct: 153 PGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFG 212
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+++ LC + AC +M + G +P V ++TL L + D + +L +++
Sbjct: 213 VVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEM 269
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 86/238 (36%), Gaps = 42/238 (17%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVAT 121
K + +K+ +++ GI + F ++ Y RA+ P + L MK C PT +
Sbjct: 116 KEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKS 175
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V+ L S A + EM+ GV P+ T+ K + + A L R M
Sbjct: 176 YNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMT 235
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ CVPN Y LI H L ++ +
Sbjct: 236 KHG-CVPNSVVYQTLI-----------------------------------HALSKRDRV 259
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW-----RRLKKKLDEESITFG 294
EA + EM G LP TF + GL + + + R L + IT+G
Sbjct: 260 NEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYG 317
>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
Length = 439
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 132/258 (51%), Gaps = 11/258 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI G CK R+ AER L EM + + PNV+T++ L++ +R L
Sbjct: 151 PNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLS----- 205
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ V+ M I+P+V ++S +++ ++ ++ L+ M KG P V T
Sbjct: 206 -----KVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 260
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+++ R++D +LL +M + GV+ + + N K Y + A+ ++ M
Sbjct: 261 YSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMT 320
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L +PNI +YNI++ A ++ + H++ + LD+ +YT++IHG+C+
Sbjct: 321 SNGL-IPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMV 379
Query: 242 KEACQYFVEMIEKGLLPQ 259
KEA F ++ K + P
Sbjct: 380 KEAYDLFYKLKFKRVEPD 397
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 136/272 (50%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ L+ +C+ + A +LG+M++ G+EP++VT + L+NG C
Sbjct: 46 PDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFC----------L 95
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+I++A V +M GI+ DV +I++ + +L+ L MK++GI P V T
Sbjct: 96 SNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVT 155
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ LC GR+ DAE L EM ++P+ T++ Y R + +Y+ M
Sbjct: 156 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI 215
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN+ TY+ LI NR+D ++ + + ++ +Y+ L +G + +
Sbjct: 216 QMSI-DPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRV 274
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + +M ++G+ V+ TL +G Q+
Sbjct: 275 DDGIKLLDDMPQRGVAANTVSCNTLIKGYFQA 306
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
+LI G+ + +ID+A G M G+ PN+ +YN++L G L N EK +
Sbjct: 298 TLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAG------LFANGEVEKALSR- 350
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
F+ M+ + D+ +++I++H +A + + D +K K + P YT ++
Sbjct: 351 ---FEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAE 407
Query: 129 LCSCGRIEDAEEL 141
L G +A+ L
Sbjct: 408 LNRAGMRTEADAL 420
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHV---KGSELGLDLDSYTMLIHGLCEKQKWKE 243
+P+I +N ++ + D+V +W + +G E+ DL + +L++ C +
Sbjct: 7 LPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSS 66
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A Y +M++ G+ P VT +L G S+ ++ + ++++ I
Sbjct: 67 ALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGI 114
>gi|42567170|ref|NP_194410.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659854|gb|AEE85254.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 369
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 132/258 (51%), Gaps = 11/258 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI G CK R+ AER L EM + + PNV+T++ L++ +R L
Sbjct: 81 PNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLS----- 135
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ V+ M I+P+V ++S +++ ++ ++ L+ M KG P V T
Sbjct: 136 -----KVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 190
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+++ R++D +LL +M + GV+ + + N K Y + A+ ++ M
Sbjct: 191 YSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMT 250
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L +PNI +YNI++ A ++ + H++ + LD+ +YT++IHG+C+
Sbjct: 251 SNGL-IPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMV 309
Query: 242 KEACQYFVEMIEKGLLPQ 259
KEA F ++ K + P
Sbjct: 310 KEAYDLFYKLKFKRVEPD 327
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 123/245 (50%), Gaps = 11/245 (4%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
+M++ G+EP++VT + L+NG C +I++A V +M GI+ DV +
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFC----------LSNSIKDAVYVAGQMEKMGIKRDVVVDT 52
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
I++ + +L+ L MK++GI P V TY+S++ LC GR+ DAE L EM
Sbjct: 53 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 112
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
++P+ T++ Y R + +Y+ M + + PN+ TY+ LI NR+D
Sbjct: 113 KINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSID-PNVFTYSSLIYGLCMHNRVDE 171
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++ + + ++ +Y+ L +G + + + + +M ++G+ V+ TL +
Sbjct: 172 AIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIK 231
Query: 269 GLIQS 273
G Q+
Sbjct: 232 GYFQA 236
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
+LI G+ + +ID+A G M G+ PN+ +YN++L G L N EK +
Sbjct: 228 TLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAG------LFANGEVEKALSR- 280
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
F+ M+ + D+ +++I++H +A + + D +K K + P YT ++
Sbjct: 281 ---FEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAE 337
Query: 129 LCSCGRIEDAEEL 141
L G +A+ L
Sbjct: 338 LNRAGMRTEADAL 350
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 133/267 (49%), Gaps = 11/267 (4%)
Query: 25 RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84
+ L EM ++G P+++TYNV+LNG+C+ E + +A + + + G EP+
Sbjct: 2 KLLDEMRDKGCAPDIITYNVVLNGICQ----------EGRVDDAMEFLENLPSYGGEPNT 51
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
S++IVL A + + + + M KG P V T+ ++ LC G +E A E+L +
Sbjct: 52 VSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQ 111
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
+ + G +P++ +YN + +K + AM M C P+I +YN L+
Sbjct: 112 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRG-CYPDIVSYNTLLTALCRNG 170
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+D+ ++ + +KG L SY +I GL + K KEA + EMI KGL P +T+
Sbjct: 171 EVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYT 230
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDEESI 291
T+ GL + D + R K+ + I
Sbjct: 231 TIASGLCREDKIEEAIRTFCKVQDMGI 257
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 17/288 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ G R + AE+ + EM +G PNVVT+N+L++ +CRR + P
Sbjct: 49 PNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEP---- 104
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +V +++ G P+ S++ +LH + + K ++ + M +G P + +
Sbjct: 105 ------AMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVS 158
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G ++ A +LL ++ G SP +YN A++L +M
Sbjct: 159 YNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMI 218
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVRE-IWNHVKGSELGL--DLDSYTMLIHGLCEK 238
L P+I TY + L R D + E I K ++G+ + Y ++ GLC++
Sbjct: 219 SKGL-QPDIITYTTIAS---GLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKR 274
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
++ A F MI G +P + T+ L GL +++ R L +L
Sbjct: 275 RETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQL 322
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 132/264 (50%), Gaps = 11/264 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ +LI+G C+ + A L M+ +G+E + +TYN+++ G C+ +
Sbjct: 476 NIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCK----------D 525
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I A K+ D+M +G +PD F+ ++H Y K + +L L MK +G+ P V +Y
Sbjct: 526 SKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSY 585
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C I+ A E L E++ G+ P+A YN Y + +GA+ + M+
Sbjct: 586 GTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMES 645
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ N+ TY L+ +D + ++ + + + + + YT++I GLC+ K
Sbjct: 646 IGIQPTNV-TYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMD 704
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
EA YF EM + + P K+T+ TL
Sbjct: 705 EAMNYFEEMRSRSIPPNKITYTTL 728
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ M+ S+I+ +C + +++ A LG+M GV+P+VV+Y +++G C+
Sbjct: 545 PDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCK---------- 594
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K I+ A + +E+ G++P+ ++ ++ Y R ++ L+ M+ GI PT T
Sbjct: 595 AKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVT 654
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ +C G +++A+ + + +N +
Sbjct: 655 YCSLMHWMCHAGLVDEAKTMFEQSRKNSIE------------------------------ 684
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ Y I+I + +MD + ++ + + +YT L++ C+
Sbjct: 685 ------VGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNN 738
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+EA + F EM+ G++P V++ TL G Q D L
Sbjct: 739 EEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSL 773
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 37/291 (12%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR-------------- 52
Y L+ CK R+D A R G M E V P++VT+ +L+NG+ R
Sbjct: 269 YNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREME 328
Query: 53 -ASLHPNE--------------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+ PNE F + IR +FDEM + ++ +++++ +
Sbjct: 329 GLGITPNEVICNELIDWHCRKGHFTEAIR----LFDEMVSKEMKSTAVTYNLIARALCKE 384
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCS-CGRIEDAEELLGEMVRNGVSPS-AE 155
+ + + L M G+ + SVV L GR+E L+ EMV+ G+ P+ A
Sbjct: 385 GEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDAL 444
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
C + +GR+ A+ ++ +M E LC+ NI T N LI M E+
Sbjct: 445 MTACTKQLCQGRRHQE-AVGIWLKMLEKGLCI-NIATSNALIHGLCEGKNMKGATEVLRT 502
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + LD +Y ++I G C+ K +EA + +MI KG P F ++
Sbjct: 503 MVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSI 553
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 122/294 (41%), Gaps = 27/294 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
PN + LI C+ A R EM+ + ++ VTYN++ +C+ + ER
Sbjct: 334 PNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERI 393
Query: 61 -----------------------FEKTIR--NAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
++T R + ++ EM RG++P+ +
Sbjct: 394 LEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLC 453
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + Q ++ M EKG+C +AT +++ LC ++ A E+L MV G+
Sbjct: 454 QGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNI 513
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN + A+KL M P+ + +N +I + L +M+ +
Sbjct: 514 TYNIMIQGCCKDSKIEEALKLRDDMIRKGF-KPDAYMFNSIIHAYCDLGKMEEALHLLGQ 572
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+K + D+ SY +I G C+ + ++A +Y E++ GL P V + L G
Sbjct: 573 MKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGG 626
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 8/241 (3%)
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE-KGICPTVATY 122
++R A F + R P V + + +L +R + + M++ K + P +Y
Sbjct: 173 SLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSY 232
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET--YNCFFKEYRGRKDANGAMKLYRQM 180
TS++K LC G+++D ++L +++ G+ SA YN + A++L +M
Sbjct: 233 TSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRM 292
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM--LIHGLCEK 238
+E + P++ T+ ILI +R V + ++G LG+ + LI C K
Sbjct: 293 EESRV-APSMVTFGILINGLKRSDRFGEVGALLREMEG--LGITPNEVICNELIDWHCRK 349
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
+ EA + F EM+ K + VT+ + R L + + R+ +++ +T S
Sbjct: 350 GHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLF 409
Query: 299 N 299
N
Sbjct: 410 N 410
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 123/323 (38%), Gaps = 45/323 (13%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y + CK ++ AER L EM+ G+ + +N ++ G+ +R R E +R
Sbjct: 374 YNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTG-----RLESVVR 428
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ EM RG++P+ + + + Q ++ M EKG+C +AT +++
Sbjct: 429 ----LISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALI 484
Query: 127 KCLC--------------------------------SC---GRIEDAEELLGEMVRNGVS 151
LC C +IE+A +L +M+R G
Sbjct: 485 HGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFK 544
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P A +N Y A+ L QMK + + P++ +Y +I + + E
Sbjct: 545 PDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGV-QPDVVSYGTIIDGYCKAKDIQKANE 603
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
N + L + Y LI G A M G+ P VT+ +L +
Sbjct: 604 YLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMC 663
Query: 272 QSDMLRTWRRLKKKLDEESITFG 294
+ ++ + + ++ + SI G
Sbjct: 664 HAGLVDEAKTMFEQSRKNSIEVG 686
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 122/235 (51%), Gaps = 13/235 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y ++ GWC I R A L EM++RG+ PN+ TYN +L G R IR
Sbjct: 196 YNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQ----------IR 245
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + F EM+ R E DV +++ V+H + A + + + + + M +G+ P+VATY + +
Sbjct: 246 QAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFI 305
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE-YRGRKDANGAMKLYRQMKEDDL 185
+ LC +E+A + EMVR G P+ TYN + + K + G + R E++
Sbjct: 306 QVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRM--ENEG 363
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C PN TYN++I + + ++ ++ + + +LD+Y +LI G+ +++
Sbjct: 364 CEPNFQTYNMMIRYYSECSEVEKALGLFEKMGTGDCLPNLDTYNILISGMFVRKR 418
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +++ G+ + +I A F EM +R E +VVTY +++G
Sbjct: 226 PNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGE------- 278
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I+ VFDEM G+ P V +++ + V + + ++ M KG P V T
Sbjct: 279 ---IKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTT 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ L G+ EEL+ M G P+ +TYN + Y + A+ L+ +M
Sbjct: 336 YNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMG 395
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMV 209
D C+PN+ TYNILI GMF+ DMV
Sbjct: 396 TGD-CLPNLDTYNILISGMFVRKRSEDMV 423
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 14/270 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++ + +++ CK R++ A + R + VTYNV++NG C
Sbjct: 158 DLASFNTILDVLCKSKRVEKAYELFRALRGR-FSADTVTYNVIVNGWC----------LI 206
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K A +V EM RGI P++T+++ +L + RA + + + + MK++ V TY
Sbjct: 207 KRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTY 266
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+VV G I+ + EM+R GV PS TYN F + + A+ ++ +M
Sbjct: 267 TTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVR 326
Query: 183 DDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
PN+ TYN+LI G+F A + E+ ++ + +Y M+I E +
Sbjct: 327 KGY-EPNVTTYNVLIRGLFHA-GKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEV 384
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
++A F +M LP T+ L G+
Sbjct: 385 EKALGLFEKMGTGDCLPNLDTYNILISGMF 414
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 4/234 (1%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A K+F M G D+ SF+ +L V ++ + + + + ++ + TV TY +V
Sbjct: 143 AVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSADTV-TYNVIVN 201
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
C R A E+L EMV G++P+ TYN + + A + + +MK+ + C
Sbjct: 202 GWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRN-CE 260
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
++ TY ++ F + R +++ + + + +Y I LC+K + A
Sbjct: 261 IDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVM 320
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
F EM+ KG P T+ L RGL + L ++++ E FQ Y+
Sbjct: 321 FEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCE--PNFQTYN 372
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
MR I P +F+IV Y+ + KP ++ M E G +A++ +++ LC R
Sbjct: 115 MRSLRIGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 174
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+E A EL +R S TYN + K A+++ ++M + + PN+ TYN
Sbjct: 175 VEKAYELF-RALRGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGIN-PNLTTYN 232
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
++ F ++ E + +K +D+ +YT ++HG + K F EMI +
Sbjct: 233 TMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIRE 292
Query: 255 GLLPQKVTFETLYRGLIQSD 274
G+LP T+ + L + D
Sbjct: 293 GVLPSVATYNAFIQVLCKKD 312
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y + I CK + ++ A EM+ +G EPNV TYNVL+ G+ H +
Sbjct: 295 LPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGL-----FHAGK- 348
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E++ M G EP+ ++++++ YS + + +L M P +
Sbjct: 349 ----FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGTGDCLPNLD 404
Query: 121 TYTSVVKCLCSCGRIED 137
TY ++ + R ED
Sbjct: 405 TYNILISGMFVRKRSED 421
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 137/299 (45%), Gaps = 35/299 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNER 60
P+ Y +LI GWCKI R++ A + EM+ +G V P+ V YN L+ G C R L +
Sbjct: 181 PDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQ 240
Query: 61 FEKTI-------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ + + +A V +EM+ G+ PDV +++I+++ Y
Sbjct: 241 YREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYC 300
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + +L+ M KG+ T TYTS++ G++++ + L V+ G+ P
Sbjct: 301 KEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVV 360
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
YN + D A ++ +M++ + P+ TYN LI F L R+D R + +
Sbjct: 361 MYNALINSHCAGGDMERAFEIMAEMEKKRI-PPDDVTYNTLIRGFCLLGRLDEARGLIDE 419
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ + DL GLC+ + +A EM+ KG+ P T+ +L GL D
Sbjct: 420 MTKRGIQPDL--------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGLTTVD 470
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 132/292 (45%), Gaps = 13/292 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNER 60
PN Y ++I G+C R+ A + EM ERG + P+ TY L++G C+ +
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRME---- 200
Query: 61 FEKTIRNAEKVFDEMRVRG-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+A KVFDEM +G + P ++ ++ Y K ++L M ++G+ TV
Sbjct: 201 ------DAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTV 254
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
ATY +V L GR DA +L EM RNG+SP TYN Y + A++++ +
Sbjct: 255 ATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEE 314
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + + TY LI F ++ ++ + D+ Y LI+ C
Sbjct: 315 MSRKGVRATAV-TYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGG 373
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ A + EM +K + P VT+ TL RG L R L ++ + I
Sbjct: 374 DMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGI 425
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
+C T T+ +++ LC+ G+ A ELL +M R P+A TYN + R A+
Sbjct: 114 LCTT--TFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAAL 167
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH-VKGSELGLDLDSYTMLIH 233
++ R+M+E P+ +TY LI + + RM+ ++++ + E+ Y LI
Sbjct: 168 EVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIG 227
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
G C++ K A QY +M+++G+ T+ L L
Sbjct: 228 GYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHAL 264
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 145/303 (47%), Gaps = 22/303 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT LI CK + + A + L EM +G +P+VVTYNVL+NG+C+ L
Sbjct: 192 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD----- 246
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K + M G +P+V + +I+L + + L+ M KG P+V T
Sbjct: 247 -----EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 301
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G + A ++L +M +G +P++ +YN + K + A++ Y +
Sbjct: 302 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIE-YLDIM 360
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P+I TYN L+ ++D+ EI N + L +Y +I GL + K
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 420
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
+ A + EM KGL P +T+ +L GL + + K+D E+I F + +
Sbjct: 421 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSR----------EGKVD-EAIKFFHDLEGLG 469
Query: 302 FKP 304
+P
Sbjct: 470 IRP 472
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 151/328 (46%), Gaps = 40/328 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y LI G+CK ID A + L M V P+VVTYN +L +C L
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180
Query: 61 F-------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E + A K+ DEMR +G +PDV +++++++
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + ++ LN M G P V T+ +++ +CS GR DAE+LL +M+R G SPS
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300
Query: 156 TYNCFFKEYRGRKDANG-AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
T+N + R+ G A+ + +M C PN +YN L+ F +MD E +
Sbjct: 301 TFNILI-NFLCRQGLLGRAIDILEKMPMHG-CTPNSLSYNPLLHGFCKEKKMDRAIEYLD 358
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ D+ +Y L+ LC+ K A + ++ KG P +T+ T+ GL S
Sbjct: 359 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL--SK 416
Query: 275 MLRTWRRLK-------KKLDEESITFGS 295
+ +T R +K K L + IT+ S
Sbjct: 417 VGKTERAIKLLDEMRRKGLKPDIITYSS 444
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 133/269 (49%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + ++ C R AE+ L +M+ +G P+VVT+N+L+N +CR+ L
Sbjct: 262 PNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG----- 316
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M + G P+ S++ +LH + + K +++ L+ M +G P + T
Sbjct: 317 -----RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 371
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G+++ A E+L ++ G SP TYN A+KL +M+
Sbjct: 372 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 431
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I TY+ L+ ++D + ++ ++G + + +Y ++ GLC+ ++
Sbjct: 432 RKGL-KPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 490
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A + MI K P + T+ L G+
Sbjct: 491 DRAIDFLAYMISKRCKPTEATYTILIEGI 519
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 138/305 (45%), Gaps = 49/305 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ TSLI G+C+I + A + + + G P+V+TYNVL++G C+
Sbjct: 89 IPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGE------ 142
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I NA +V D M V PDV +++ +L + K + +++ L+ +K P V
Sbjct: 143 ----IDNALQVLDRMNV---APDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 195
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT +++ C + A +LL EM G P TYN + A+K M
Sbjct: 196 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 255
Query: 181 KEDDLCVPNIHTYNILI------GMFMALNRM--DMVRE-----------IWNHV-KGSE 220
C PN+ T+NI++ G +M ++ DM+R+ + N + +
Sbjct: 256 PSYG-CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL 314
Query: 221 LGLDLD---------------SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
LG +D SY L+HG C+++K A +Y M+ +G P VT+ T
Sbjct: 315 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 374
Query: 266 LYRGL 270
L L
Sbjct: 375 LLTAL 379
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 14/252 (5%)
Query: 25 RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84
+FL M+ RG P+++ L+ G C R KT + A V + + G PDV
Sbjct: 78 KFLESMVYRGDIPDIIPCTSLIRGFC---------RIGKT-KKATWVMEILEQSGAVPDV 127
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++++++ Y ++ + +L L+ M + P V TY ++++ LC G+++ A E+L
Sbjct: 128 ITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDR 184
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
++ P TY + AMKL +M+ P++ TYN+LI
Sbjct: 185 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG-SKPDVVTYNVLINGICKEG 243
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
R+D + N++ ++ ++ +++ +C +W +A + +M+ KG P VTF
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303
Query: 265 TLYRGLIQSDML 276
L L + +L
Sbjct: 304 ILINFLCRQGLL 315
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 36/241 (14%)
Query: 61 FEKTIRNAE-----KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
+ +RN E K + M RG PD+ + ++ + R K + + + +++ G
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P V TY ++ C G I++A ++L M V+P TYN + AM+
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180
Query: 176 -LYRQMKEDDLCVPNIHTYNILI-------GMFMALNRMDMVREIWNHVKGSELGLDLDS 227
L RQ++++ C P++ TY ILI G+ A+ +D +R KGS+ D+ +
Sbjct: 181 VLDRQLQKE--CYPDVITYTILIEATCKESGVGQAMKLLDEMRN-----KGSK--PDVVT 231
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL-----------IQSDML 276
Y +LI+G+C++ + EA ++ M G P +T + R + + SDML
Sbjct: 232 YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML 291
Query: 277 R 277
R
Sbjct: 292 R 292
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 135/272 (49%), Gaps = 13/272 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS-LHPNERFEKTI 65
Y ++I G CK+ + A L +M E ++ +VV YN +++ +C+ +H
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIH--------- 94
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
A+ +F EM +GI PDV ++S ++ + R+ + + L M E+ I P V T++++
Sbjct: 95 --AQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSAL 152
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ L G++ +AEE+ G+M+R G+ P+ TYN + + N A ++ M
Sbjct: 153 INALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS- 211
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
C P++ T++ LI + R+D EI+ + + + +YT LIHG C+ A
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
MI G+ P +TF+++ L LR
Sbjct: 272 DLLNVMISSGVAPNYITFQSMLASLCSKKELR 303
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 116/243 (47%), Gaps = 11/243 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V +Y ++I CK A+ EM ++G+ P+V+TY+ +++ CR
Sbjct: 74 AHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRW------ 127
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+AE++ +M R I PDV +FS +++ + K + + M +GI PT T
Sbjct: 128 ----TDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C R+ DA+ +L M SP T++ Y K + M+++ +M
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ V N TY LI F + +D +++ N + S + + ++ ++ LC K++
Sbjct: 244 RRGI-VANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Query: 242 KEA 244
++A
Sbjct: 303 RKA 305
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 95/183 (51%), Gaps = 10/183 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +++LI K ++ AE G+M+ RG+ P +TYN +++G C++ L+
Sbjct: 144 PDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLN----- 198
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A+++ D M + PDV +FS +++ Y +A + ++ M +GI T
Sbjct: 199 -----DAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT 253
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G ++ A++LL M+ +GV+P+ T+ +K+ A + ++
Sbjct: 254 YTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Query: 182 EDD 184
+ +
Sbjct: 314 KSE 316
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 15/240 (6%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M+E G P+VVT+ L+NG+C E + A + D M G +P +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLC----------CEGRVLQALALVDRMVEEGHQP----YGT 46
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+++ + + +L+ L+ M+E I V Y +++ LC G A+ L EM G
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
+ P TY+ + A +L R M E + P++ T++ LI + ++
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI-NPDVVTFSALINALVKEGKVSEA 165
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
EI+ + + +Y +I G C++ + +A + M K P VTF TL G
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 145/303 (47%), Gaps = 22/303 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT LI CK + + A + L EM +G +P+VVTYNVL+NG+C+ L
Sbjct: 249 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD----- 303
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K + M G +P+V + +I+L + + L+ M KG P+V T
Sbjct: 304 -----EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 358
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G + A ++L +M +G +P++ +YN + K + A++ Y +
Sbjct: 359 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIE-YLDIM 417
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P+I TYN L+ ++D+ EI N + L +Y +I GL + K
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 477
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
+ A + EM KGL P +T+ +L GL + + K+D E+I F + +
Sbjct: 478 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSR----------EGKVD-EAIKFFHDLEGLG 526
Query: 302 FKP 304
+P
Sbjct: 527 IRP 529
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 151/328 (46%), Gaps = 40/328 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y LI G+CK ID A + L M V P+VVTYN +L +C L
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237
Query: 61 F-------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E + A K+ DEMR +G +PDV +++++++
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + ++ LN M G P V T+ +++ +CS GR DAE+LL +M+R G SPS
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357
Query: 156 TYNCFFKEYRGRKDANG-AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
T+N + R+ G A+ + +M C PN +YN L+ F +MD E +
Sbjct: 358 TFNILI-NFLCRQGLLGRAIDILEKMPMHG-CTPNSLSYNPLLHGFCKEKKMDRAIEYLD 415
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ D+ +Y L+ LC+ K A + ++ KG P +T+ T+ GL S
Sbjct: 416 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL--SK 473
Query: 275 MLRTWRRLK-------KKLDEESITFGS 295
+ +T R +K K L + IT+ S
Sbjct: 474 VGKTERAIKLLDEMRRKGLKPDIITYSS 501
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 133/269 (49%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + ++ C R AE+ L +M+ +G P+VVT+N+L+N +CR+ L
Sbjct: 319 PNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG----- 373
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M + G P+ S++ +LH + + K +++ L+ M +G P + T
Sbjct: 374 -----RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 428
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G+++ A E+L ++ G SP TYN A+KL +M+
Sbjct: 429 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 488
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I TY+ L+ ++D + ++ ++G + + +Y ++ GLC+ ++
Sbjct: 489 RKGL-KPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 547
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A + MI K P + T+ L G+
Sbjct: 548 DRAIDFLAYMISKRCKPTEATYTILIEGI 576
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 138/305 (45%), Gaps = 49/305 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ TSLI G+C+I + A + + + G P+V+TYNVL++G C+
Sbjct: 146 IPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGE------ 199
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I NA +V D M V PDV +++ +L + K + +++ L+ +K P V
Sbjct: 200 ----IDNALQVLDRMNV---APDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 252
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT +++ C + A +LL EM G P TYN + A+K M
Sbjct: 253 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 312
Query: 181 KEDDLCVPNIHTYNILI------GMFMALNRM--DMVRE-----------IWNHV-KGSE 220
C PN+ T+NI++ G +M ++ DM+R+ + N + +
Sbjct: 313 PSYG-CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL 371
Query: 221 LGLDLD---------------SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
LG +D SY L+HG C+++K A +Y M+ +G P VT+ T
Sbjct: 372 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 431
Query: 266 LYRGL 270
L L
Sbjct: 432 LLTAL 436
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 14/252 (5%)
Query: 25 RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84
+FL M+ RG P+++ L+ G C R KT + A V + + G PDV
Sbjct: 135 KFLESMVYRGDIPDIIPCTSLIRGFC---------RIGKT-KKATWVMEILEQSGAVPDV 184
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++++++ Y ++ + +L L+ M + P V TY ++++ LC G+++ A E+L
Sbjct: 185 ITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDR 241
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
++ P TY + AMKL +M+ P++ TYN+LI
Sbjct: 242 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG-SKPDVVTYNVLINGICKEG 300
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
R+D + N++ ++ ++ +++ +C +W +A + +M+ KG P VTF
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360
Query: 265 TLYRGLIQSDML 276
L L + +L
Sbjct: 361 ILINFLCRQGLL 372
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 36/241 (14%)
Query: 61 FEKTIRNAE-----KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
+ +RN E K + M RG PD+ + ++ + R K + + + +++ G
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P V TY ++ C G I++A ++L M V+P TYN + AM+
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237
Query: 176 -LYRQMKEDDLCVPNIHTYNILI-------GMFMALNRMDMVREIWNHVKGSELGLDLDS 227
L RQ++++ C P++ TY ILI G+ A+ +D +R KGS+ D+ +
Sbjct: 238 VLDRQLQKE--CYPDVITYTILIEATCKESGVGQAMKLLDEMRN-----KGSK--PDVVT 288
Query: 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL-----------IQSDML 276
Y +LI+G+C++ + EA ++ M G P +T + R + + SDML
Sbjct: 289 YNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDML 348
Query: 277 R 277
R
Sbjct: 349 R 349
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 149/311 (47%), Gaps = 23/311 (7%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT LI G CK R+D A L EM+ +GV NVVTY VL++G+C+ E+ +
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCK----------ERKVA 380
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
AE V M G+ + ++ ++H + + +L L+ MK KG+ ++ Y +++
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ LC+ ++++A+ LL +M +G+ P+ Y A+ + +++ +
Sbjct: 441 QGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF- 499
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD--LDSYTMLIHGLCEKQKWKEA 244
PN+ TY LI +D +N ++ +LGLD + +YT L+ GLC+ EA
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMR--DLGLDPNVQAYTALVDGLCKNGCLNEA 557
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI--------TFGSE 296
Q F EM+ KG+ KV + L G ++ L LK K+ + + F S
Sbjct: 558 VQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISG 617
Query: 297 FQNYHFKPYRR 307
F N + P R
Sbjct: 618 FCNLNMMPEAR 628
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 11/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + SLI G+ K +D E+ + EM G + +VVTYN L+N C+ +
Sbjct: 220 LPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRME---- 275
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A F M+ G+ +V +FS + + + + ++ M+ +G+
Sbjct: 276 ------TAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEF 329
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ C GR++DA LL EMVR GV + TY + A + R M
Sbjct: 330 TYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMM 389
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + + ++ G FM N + + + +K L LD+ Y LI GLC K
Sbjct: 390 EKAGVRANELLYTTLIHGHFMNKNS-EKALGLLSEMKNKGLELDISLYGALIQGLCNVHK 448
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA +M E GL P + + T+ +S
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 130/271 (47%), Gaps = 11/271 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +LI +CK R++ A + M GV NVVT++ ++ C+ E
Sbjct: 257 DVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK----------E 306
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+R A K+F +MRVRG+ + +++ ++ +A + ++ L+ M +G+ V TY
Sbjct: 307 GLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTY 366
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T +V LC ++ +AE++L M + GV + Y + K++ A+ L +MK
Sbjct: 367 TVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKN 426
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L + +I Y LI ++++D + + + S L + YT ++ + K
Sbjct: 427 KGLEL-DISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA ++++ G P +T+ L GL ++
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKA 516
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 11/249 (4%)
Query: 21 DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80
D + R + + E+ PNV T+N++++ +C+ E + A +F M+ G
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCK----------EGELAEARSLFSRMKEMGC 219
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
PDV +F+ ++ Y + + + M+ G V TY +++ C C GR+E A
Sbjct: 220 LPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYG 279
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
M R GV + T++ F + AMKL+ QM+ + + N TY LI
Sbjct: 280 YFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMAL-NEFTYTCLIDGT 338
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
R+D + + + + L++ +YT+L+ GLC+++K EA M + G+ +
Sbjct: 339 CKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANE 398
Query: 261 VTFETLYRG 269
+ + TL G
Sbjct: 399 LLYTTLIHG 407
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI G CK ID A +M + G++PNV Y L++G+C+ L+
Sbjct: 501 PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLN----- 555
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F+EM +G+ D ++ +L Y + + M + G+ +
Sbjct: 556 -----EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFC 610
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT + C+ + +A E+ EM+ +G++P YNC +Y+ + A+ L +M+
Sbjct: 611 YTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 46/250 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +YT+++ K ++ A L ++++ G +PNV+TY L++G+C+ S
Sbjct: 466 PNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS------- 518
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A F++MR G++P+V +
Sbjct: 519 ---IDEAISHFNKMRDLGLDPNVQA----------------------------------- 540
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++V LC G + +A +L EMV G+S Y Y + + + A L +M
Sbjct: 541 YTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI 600
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L + ++ Y I F LN M RE+++ + G + D Y LI +
Sbjct: 601 DSGLQL-DLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNL 659
Query: 242 KEACQYFVEM 251
+EA EM
Sbjct: 660 EEAISLQDEM 669
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 107/257 (41%), Gaps = 50/257 (19%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+D A R + + E V PN T N +L + R +++ R ++F+++
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLAR----------DRSGRLVRRLFEQLPA-- 185
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
P+V +F+IV+ + + + + MKE G P V T+ S++ CG +++ E
Sbjct: 186 --PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
+L+ EM R+G C ++ TYN LI
Sbjct: 244 QLVEEMRRSG------------------------------------CKADVVTYNALINC 267
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
F RM+ + +K + ++ +++ + C++ +EA + F +M +G+
Sbjct: 268 FCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALN 327
Query: 260 KVTFETLYRGLIQSDML 276
+ T+ L G ++ L
Sbjct: 328 EFTYTCLIDGTCKAGRL 344
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
+P+ T+N + A L+ +MKE C+P++ T+N LI + +D V
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMG-CLPDVVTFNSLIDGYGKCGELDEVE 243
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ ++ S D+ +Y LI+ C+ + + A YF M +G++ VTF T
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303
Query: 271 IQSDMLRTWRRL 282
+ ++R +L
Sbjct: 304 CKEGLVREAMKL 315
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 146/309 (47%), Gaps = 22/309 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN--- 58
PNV Y L+ CK N++D A++ L EM +G P+ V+Y +++ +C +
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 59 -ERFEKTI----------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
ERFE + + A ++ EM +GI P+V S+S +++V + + +
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCF 160
L+ L M ++G P + T +S+VK G DA +L +M+R G+ P+ YN
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
+ + + A+ ++ M+E C PNI TY LI F +D IWN + S
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIG-CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR 280
++ YT ++ LC K+KEA M ++ P TF +GL + L
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 281 RLKKKLDEE 289
++ ++++++
Sbjct: 478 KVFRQMEQQ 486
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 136/295 (46%), Gaps = 34/295 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------- 54
PNV Y++LI C +I++A FL +M++RG PN+ T + L+ G R +
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Query: 55 ---------LHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
L PN T I A VF M G P++ ++ +++ ++
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ ++ N M G CP V YT++V+ LC + ++AE L+ M + +PS
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD----MVRE 211
T+N F K + A K++RQM++ C PNI TYN L+ NR++ + RE
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
I+ ++G E +Y L+HG C A Q +M+ G P ++T +
Sbjct: 519 IF--MRGVE--WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 119/280 (42%), Gaps = 14/280 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ Y SLI G+ K +D A +M+ G PNVV Y ++ +CR +
Sbjct: 385 PNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF------ 438
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP-TVA 120
+ AE + + M P V +F+ + A + + M+++ CP +
Sbjct: 439 ----KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIV 494
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ L RIE+A L E+ GV S+ TYN A++L +M
Sbjct: 495 TYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKM 554
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS--ELGLDLDSYTMLIHGLCEK 238
D P+ T N++I + + + ++ + V + D+ SYT +I GLC
Sbjct: 555 MVDGKS-PDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRS 613
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
++ MI G++P T+ L I D++R
Sbjct: 614 NCREDGVILLERMISAGIVPSIATWSVLINCFILDDIVRA 653
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 127/303 (41%), Gaps = 44/303 (14%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
++ S+I + ++ + A + E G +P+V YN +L+ + E I
Sbjct: 113 LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLG----------ENRI 162
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+ V+ +M+ G EP+V +++++L + +K + L M KG CP +YT+V
Sbjct: 163 QMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTV 222
Query: 126 VKCLCSCGRIED------------------------------AEELLGEMVRNGVSPSAE 155
+ +C G +++ A EL+ EMV G+SP+
Sbjct: 223 ISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWN 214
+Y+ A QM + C PNI+T + L+ G F+ D + ++WN
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRG-CHPNIYTLSSLVKGCFLRGTTFDAL-DLWN 340
Query: 215 H-VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++G L ++ +Y L+ G C +A F M E G P T+ +L G +
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR 400
Query: 274 DML 276
L
Sbjct: 401 GSL 403
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ + + + +M+++G F V+ VY + + +++ +KE G P+V Y
Sbjct: 92 VDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNH 151
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
V+ L RI+ + +M R+G P+ TYN K +GA KL +M
Sbjct: 152 VLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG 211
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS----YTMLIHGLCEKQK 240
C P+ +Y +I ++ + +V+E G EL + Y LI+GLC++
Sbjct: 212 -CCPDAVSYTTVIS---SMCEVGLVKE------GRELAERFEPVVSVYNALINGLCKEHD 261
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+K A + EM+EKG+ P +++ TL L S +
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T T+ +++ L G+++ + LL +M G S + + YR A A++++
Sbjct: 75 TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMF 134
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
++KE C P++ YN ++ + NR+ M+ ++ +K ++ +Y +L+ LC+
Sbjct: 135 YRIKEFG-CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK 193
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
K A + VEM KG P V++ T+ + + +++ R L ++ +
Sbjct: 194 NNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE 243
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 149/311 (47%), Gaps = 23/311 (7%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT LI G CK R+D A L EM+ +GV NVVTY VL++G+C+ E+ +
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCK----------ERKVA 380
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
AE V M G+ + ++ ++H + + +L L+ MK KG+ ++ Y +++
Sbjct: 381 EAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALI 440
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ LC+ ++++A+ LL +M +G+ P+ Y A+ + +++ +
Sbjct: 441 QGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF- 499
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD--LDSYTMLIHGLCEKQKWKEA 244
PN+ TY LI +D +N ++ +LGLD + +YT L+ GLC+ EA
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMR--DLGLDPNVQAYTALVDGLCKNGCLNEA 557
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT--------FGSE 296
Q F EM+ KG+ KV + L G ++ L LK K+ + + F S
Sbjct: 558 VQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISG 617
Query: 297 FQNYHFKPYRR 307
F N + P R
Sbjct: 618 FCNLNMMPEAR 628
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 11/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + SLI G+ K +D E+ + EM G + +VVTYN L+N C+ +
Sbjct: 220 LPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRME---- 275
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A F M+ G+ +V +FS + + + + ++ M+ +G+
Sbjct: 276 ------TAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEF 329
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ C GR++DA LL EMVR GV + TY + A + R M
Sbjct: 330 TYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMM 389
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + + ++ G FM N + + + +K L LD+ Y LI GLC K
Sbjct: 390 EKAGVRANELLYTTLIHGHFMNKNS-EKALGLLSEMKNKGLELDISLYGALIQGLCNVHK 448
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA +M E GL P + + T+ +S
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 130/271 (47%), Gaps = 11/271 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +LI +CK R++ A + M GV NVVT++ ++ C+ E
Sbjct: 257 DVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK----------E 306
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+R A K+F +MRVRG+ + +++ ++ +A + ++ L+ M +G+ V TY
Sbjct: 307 GLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTY 366
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T +V LC ++ +AE++L M + GV + Y + K++ A+ L +MK
Sbjct: 367 TVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKN 426
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L + +I Y LI ++++D + + + S L + YT ++ + K
Sbjct: 427 KGLEL-DISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA ++++ G P +T+ L GL ++
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKA 516
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 11/249 (4%)
Query: 21 DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80
D + R + + E+ PNV T+N++++ +C+ E + A +F M+ G
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCK----------EGELAEARSLFSRMKEMGC 219
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
PDV +F+ ++ Y + + + M+ G V TY +++ C C GR+E A
Sbjct: 220 LPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYG 279
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
M R GV + T++ F + AMKL+ QM+ + + N TY LI
Sbjct: 280 YFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMAL-NEFTYTCLIDGT 338
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
R+D + + + + L++ +YT+L+ GLC+++K EA M + G+ +
Sbjct: 339 CKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANE 398
Query: 261 VTFETLYRG 269
+ + TL G
Sbjct: 399 LLYTTLIHG 407
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI G CK ID A +M + G++PNV Y L++G+C+ L+
Sbjct: 501 PNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLN----- 555
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F+EM +G+ D ++ +L Y + + M + G+ +
Sbjct: 556 -----EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFC 610
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT + C+ + +A E+ EM+ +G++P YNC +Y+ + A+ L +M+
Sbjct: 611 YTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 48/268 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +YT+++ K ++ A L ++++ G +PNV+TY L++G+C+ S
Sbjct: 466 PNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS------- 518
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A F++MR G++P+V +
Sbjct: 519 ---IDEAISHFNKMRDLGLDPNVQA----------------------------------- 540
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++V LC G + +A +L EMV G+S Y Y + + + A L +M
Sbjct: 541 YTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI 600
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L + ++ Y I F LN M RE+++ + G + D Y LI +
Sbjct: 601 DSGLQL-DLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNL 659
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
+EA EM + +LP +T G
Sbjct: 660 EEAISLQDEM--ERVLPSCTDSDTATDG 685
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 107/257 (41%), Gaps = 50/257 (19%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+D A R + + E V PN T N +L + R +++ R ++F+++
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLAR----------DRSGRLVRRLFEQLPA-- 185
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
P+V +F+IV+ + + + + MKE G P V T+ S++ CG +++ E
Sbjct: 186 --PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
+L+ EM R+G C ++ TYN LI
Sbjct: 244 QLVEEMRRSG------------------------------------CKADVVTYNALINC 267
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
F RM+ + +K + ++ +++ + C++ +EA + F +M +G+
Sbjct: 268 FCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALN 327
Query: 260 KVTFETLYRGLIQSDML 276
+ T+ L G ++ L
Sbjct: 328 EFTYTCLIDGTCKAGRL 344
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
+P+ T+N + A L+ +MKE C+P++ T+N LI + +D V
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMG-CLPDVVTFNSLIDGYGKCGELDEVE 243
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ ++ S D+ +Y LI+ C+ + + A YF M +G++ VTF T
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303
Query: 271 IQSDMLRTWRRL 282
+ ++R +L
Sbjct: 304 CKEGLVREAMKL 315
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+LI G+ +M EM GVEPN+ TYN L+ CR
Sbjct: 71 PNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEF------ 124
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A +FDEM V+G+ +V S++I++ R K + ++ M+ +GI P++ T
Sbjct: 125 ----KSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVT 180
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ G++ +A +M G+ PS TYN + +D A++ + MK
Sbjct: 181 FNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMK 240
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L P TY ILI F N MD + + ++ + L +D+ SY +L+H LC + K
Sbjct: 241 ERGL-APTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKM 299
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
A + F M KG+ P V ++ + G
Sbjct: 300 MHARKLFQSMDLKGVKPNSVLYDMMIYG 327
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 10/152 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P YT LI + K N +D A L EM + G+E +V +Y VLL+ +C
Sbjct: 246 PTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALC----------M 295
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +A K+F M ++G++P+ + ++++ Y R +L + M++ G+ P VA+
Sbjct: 296 EGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVAS 355
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Y ++ LC+ G+ ++AE L+ +M G+ S
Sbjct: 356 YCLTIRLLCNEGKCQEAEALIDDMEHAGLQTS 387
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +Y +IYG+ + A R + EM + G+ PNV +Y + + +C
Sbjct: 316 PNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCN---------- 365
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
E + AE + D+M G++ T I+L +R H
Sbjct: 366 EGKCQEAEALIDDMEHAGLQTSETICRILLDAKARLH 402
>gi|259490380|ref|NP_001159198.1| uncharacterized protein LOC100304284 [Zea mays]
gi|223942589|gb|ACN25378.1| unknown [Zea mays]
gi|414865313|tpg|DAA43870.1| TPA: hypothetical protein ZEAMMB73_208601 [Zea mays]
Length = 519
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 143/292 (48%), Gaps = 18/292 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + L+ GW + AE F+ EM E GVEP++VTYN L++ C+
Sbjct: 214 NRHTFNILLSGW---KSAEDAEAFVTEMRELGVEPDLVTYNSLIDCHCK----------N 260
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ ++ A K+ DEMR + I PD+ +++ ++ +P + D L M E G P V Y
Sbjct: 261 RDVQKAYKLLDEMRHKDISPDIITYTSLIGGLGLIGQPDKAKDLLKEMYELGCYPDVPAY 320
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ ++ R+ DA L+ +MV G+ P+ TYN FF+ Y D A +LY +M+
Sbjct: 321 NAAIRNFVIAKRLGDAFALMDQMVSKGLMPNPTTYNLFFRCYYWAFDIGSAWRLYERMRS 380
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ C PN + +I + ++ + E+W+ + S G +L+ LC++ K +
Sbjct: 381 EG-CYPNTQSCMFIIRLCHRYGKVALALELWSDMVSSSFGSLTLVSDVLLDLLCDEGKLE 439
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
+A + F +M+E G P V F + + L+Q L +L E+ I FG
Sbjct: 440 DAERCFCQMVELGQKPSNVAFRRI-KILMQ---LAKQEESIARLTEKMIQFG 487
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 132/271 (48%), Gaps = 12/271 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ NV + +++ CK + D A L +M RG+ PNVV+YN ++ G CR
Sbjct: 440 LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCR--------- 490
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K + A VF + +G++P+ ++SI++ R H Q +L+ +N M I
Sbjct: 491 -QKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNG-VSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++ LC G+ A ELL M+ + S +YN + + + A+ Y +
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + + PN+ TY L+ NRMD E+ + +K + LD+ +Y LI G C++
Sbjct: 610 MCGNGIS-PNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS 668
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ A F E++E+GL P + + +L G
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGF 699
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 145/298 (48%), Gaps = 15/298 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIE-RGVEPNVVTYNVLLNGVCRRASLHPNERF 61
N +Y ++I G CK+ + A L MIE + + + ++YN +++G +
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK---------- 596
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +A ++EM GI P+V +++ +++ + ++ +L+ + MK KG+ +
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +E A L E++ G++PS YN +R + A+ LY++M
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 182 EDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+D L C ++ TY LI + + + E++ ++ L D YT++++GL +K +
Sbjct: 717 KDGLRC--DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK-LDEESITFGSEF 297
+ + + F EM + + P + + + G + L RL + LD+ + G+ F
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 130/305 (42%), Gaps = 47/305 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +++ G C+ +D+A ++E+G++PN TY++L++G R H +
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRN---HDEQ-- 530
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL-NFMKEK------- 113
NA +V + M IE + + +++ + + + + L N ++EK
Sbjct: 531 -----NALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCM 585
Query: 114 ----------------------------GICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
GI P V TYTS++ LC R++ A E+ EM
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
GV Y + R + A L+ ++ E+ L P+ YN LI F L
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN-PSQPIYNSLISGFRNLGN 704
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
M +++ + L DL +YT LI GL + A + + EM GL+P ++ +
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 266 LYRGL 270
+ GL
Sbjct: 765 IVNGL 769
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 46/270 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YTSL+ G CK NR+D A EM +GV+ ++ Y L++G C+R+++
Sbjct: 617 PNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNME----- 671
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A +F E+ G+ P ++ ++ + +LD M + G+ + T
Sbjct: 672 -----SASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT 726
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ L G + A EL EM G+ P Y + +K++ +MK
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMK 786
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++++ PN+ YN +I G +
Sbjct: 787 KNNV-TPNVLIYNAVIA-----------------------------------GHYREGNL 810
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
EA + EM++KG+LP TF+ L G +
Sbjct: 811 DEAFRLHDEMLDKGILPDGATFDILVSGQV 840
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 29/280 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+P+ + YTS+I K +D A R EM+ G+ NVV L+ G C+ L
Sbjct: 301 VPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALV 360
Query: 56 ----------HPN--------ERFEKT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
PN E F K + A + + +M V G+ P V ++ +
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ K + +L + E G+ V +++ LC G+ ++A ELL +M G+ P+
Sbjct: 421 KGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWN 214
+YN + +K+ + A ++ + E L PN +TY+ILI G F + + + E+ N
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGL-KPNNYTYSILIDGCFRNHDEQNAL-EVVN 537
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
H+ S + ++ Y +I+GLC+ + +A + MIE+
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 118/290 (40%), Gaps = 47/290 (16%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + + L+ + K + D A + +M+E V P N L+ + +R SL
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSL------- 214
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF------------- 109
A++++ M G++ D + +++ R KP +L+ L+
Sbjct: 215 ---TEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLY 271
Query: 110 ----------------------MKEKGIC-PTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
MKEK +C P+ TYTSV+ G ++DA L EM+
Sbjct: 272 SLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEML 331
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+G+S + + D A+ L+ +M+++ PN T+++LI F M
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS-PNSVTFSVLIEWFRKNGEM 390
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
+ E + ++ L + +I G + QK +EA + F E E GL
Sbjct: 391 EKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL 440
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 89/232 (38%), Gaps = 35/232 (15%)
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
K+ D + G E + +F+ +L+ YS+ + ++D +N M E + P + L
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 130 CSCGRIEDAEELLGEMVRNGVS-----------------------------------PSA 154
+ +A+EL MV GV P +
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
Y+ + D A L R+MKE LCVP+ TY +I + MD + +
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + +++ + T LI G C+ A F +M ++G P VTF L
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVL 380
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT ++ G K + + EM + V PNV+ YN ++ G R +L +E
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNL--DEA 813
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
F ++ DEM +GI PD +F I++
Sbjct: 814 F--------RLHDEMLDKGILPDGATFDILV 836
>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
Length = 448
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 141/307 (45%), Gaps = 12/307 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YT+LI CK NR D A + M+E+ + PN+ Y LL CR
Sbjct: 146 VPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNLDVYTSLLAAHCR--------- 196
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A ++F EM RG P +++ ++L + L+ D + M+ +G P
Sbjct: 197 -TRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDEN 255
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP-SAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY S++ C GRI +A+ L E++ + A YN + A+++
Sbjct: 256 TYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAG 315
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M D C+P + TYN LI F N +D +++ ++ + Y+ I GLC+
Sbjct: 316 MV-DKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVG 374
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
K EA ++F + +E+G +P VT+ L RGL ++ + RL +++ E +
Sbjct: 375 KINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGYIADRSLRT 434
Query: 300 YHFKPYR 306
F+ R
Sbjct: 435 LAFQRSR 441
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 140/318 (44%), Gaps = 30/318 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V L+ +C++ R+ E+ GV ++ YN +L + +F
Sbjct: 43 PDVVTCGLLVDKFCEMKRVGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKF 102
Query: 62 E---------------KTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
KT+ R A +V EM + + PD +++ ++ V +
Sbjct: 103 SDIAVGDGSLPHVLAYKTMLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCK 161
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ ++ + M EK I P + YTS++ C +++ A L EM++ G PSA T
Sbjct: 162 HNRADDAMKVFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSAST 221
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNH 215
Y + + A ++ M+ VP+ +TY LI G MA R+ + ++
Sbjct: 222 YGLLLRCLCNGGRSYLAYDIHSSMRSRGH-VPDENTYASLIYGCCMA-GRITEAKVLFKE 279
Query: 216 V-KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
V +G + LD Y +LI GLC K +EA + M++KG +P T+ L G +++
Sbjct: 280 VLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKAN 339
Query: 275 MLRTWRRLKKKLDEESIT 292
+ +L + ++E+ +
Sbjct: 340 EVDKALQLFRVMEEKGFS 357
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 108/245 (44%), Gaps = 20/245 (8%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M+E GV P+ +YN+L+ G+ + +S + A + M G +PDV + +
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSS----------VDQARAMLSTMVGEGYDPDVVTCGL 50
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ + + + ++ G+ + Y +++K L G + + V +G
Sbjct: 51 LVDKFCEMKRVGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDG 110
Query: 150 VSPSAETY----NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
P Y +C K + R+ + ++ ++ VP+ TY LI + NR
Sbjct: 111 SLPHVLAYKTMLDCLIKTGKTREASEVVGEMIKK------SVPDGMTYTALISVLCKHNR 164
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
D ++++ + E+ +LD YT L+ C +K A + FVEMI++G P T+
Sbjct: 165 ADDAMKVFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGL 224
Query: 266 LYRGL 270
L R L
Sbjct: 225 LLRCL 229
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 45/91 (49%)
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+D VP+ +YN+L+ L+ +D R + + + G D+ + +L+ CE ++
Sbjct: 3 EDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVG 62
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
E C+ F E+ G+ + + + + L+ S
Sbjct: 63 EVCELFQELESNGVAVGMLAYNAILKALMCS 93
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 129/257 (50%), Gaps = 11/257 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
M +V +Y +I G+ +++ I A + +MIERG+ P+VVT+N L+NG CRR L
Sbjct: 513 MEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDL----- 567
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+ + +R++G+ P V +++ +++ Y Q L+ M+ + PT
Sbjct: 568 -----MEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHV 622
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++K LC ++ ++ +LL M G+ P + TYN + + K+ A++LY M
Sbjct: 623 TYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMM 682
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P TY +LI + V + ++ + L +Y +I C K +
Sbjct: 683 LLHN-CDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQ 741
Query: 241 WKEACQYFVEMIEKGLL 257
+A YF +M+ KG +
Sbjct: 742 VSKALGYFNQMLAKGFV 758
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 46/302 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YT+LI G C++ I+ A + E + RG + NV+ YN+LL+ +C+
Sbjct: 374 PDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGR------- 426
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH------VYSRAHK--PQLSLDK------- 106
I A +FDEM +EPD +SI++H RA++ Q+ L +
Sbjct: 427 ---IEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFA 483
Query: 107 -----LNFMKEKGICPT---------------VATYTSVVKCLCSCGRIEDAEELLGEMV 146
L K I V Y ++ I +A +L +M+
Sbjct: 484 QRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMI 543
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G++PS T+N + R D A K+ ++ L VP++ TY L+ + + M
Sbjct: 544 ERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGL-VPSVVTYTTLMNAYCEVGNM 602
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + ++ + + +YT+LI GLC + K E+ Q M KGLLP VT+ T+
Sbjct: 603 QEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTI 662
Query: 267 YR 268
+
Sbjct: 663 IQ 664
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 121/276 (43%), Gaps = 11/276 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y L++G C +D A F +M + GVEP+VVTYN L G +
Sbjct: 309 YNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLG----------LMS 358
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A KV +M ++G+ PD+ +++ ++ + + + +L +G V Y ++
Sbjct: 359 GARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLL 418
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
CLC GRIE+A L EM + P Y+ A +LY QM+
Sbjct: 419 SCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKF 478
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+ +L+G+F N + R ++ +L D+ Y ++I G EA Q
Sbjct: 479 PHHFAQRAVLLGLFKNGN-ISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQ 537
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ +MIE+G+ P VTF TL G + L R++
Sbjct: 538 LYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKM 573
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 132/289 (45%), Gaps = 20/289 (6%)
Query: 2 PNVKMYTS-LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P + TS LI+G C+ ++++ A FL + + V P++V+ N +++ C+
Sbjct: 234 PQSECTTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVG------- 285
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A F M G+ D S++I+LH A +L + M++ G+ P V
Sbjct: 286 ---LIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVV 342
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ K G + A +++ +M+ G++P TY + + A+KL ++
Sbjct: 343 TYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQET 402
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ N+ YN+L+ + R++ +++ ++ L D Y++LIHGLC++
Sbjct: 403 LSRGFKL-NVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGF 461
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-------DMLRTWRRL 282
+ A Q + +M K P + GL ++ + TW R+
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRM 510
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 10/155 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I +CK I A + M+ +P VTY VL+N +C L +R
Sbjct: 653 LPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDR 712
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+I + R I ++ ++ + + +L N M KG ++
Sbjct: 713 MVVSIED----------RNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIR 762
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
Y++V+ LC G I +A+ M+ GV+P E
Sbjct: 763 DYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPE 797
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 90/222 (40%), Gaps = 40/222 (18%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
I +A V +M+ + V +++ +LH + D N +K G + T +
Sbjct: 186 IHDALFVIAKMKDLNFQASVPTYNSLLH---NMRHTDIMWDVYNEIKVSGAPQSECTTSI 242
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ LC ++EDA L D+N +
Sbjct: 243 LIHGLCEQSKLEDAISFL-------------------------HDSNKVVG--------- 268
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
P+I + N ++ F + +D+ R + + + L D SY +L+HGLC EA
Sbjct: 269 ---PSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEA 325
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ +M + G+ P VT+ TL +G + ++ R++ +K+
Sbjct: 326 LGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 140/286 (48%), Gaps = 13/286 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS-LHPNERFEKTI 65
Y ++I G CK+ + A L +M E ++ +VV YN +++ +C+ +H
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIH--------- 94
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
A+ +F EM +GI PDV ++S ++ + R+ + + L M E+ I P V T++++
Sbjct: 95 --AQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSAL 152
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ L G++ +AEE+ G+M+R G+ P+ TYN + + N A ++ M
Sbjct: 153 INALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS- 211
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
C P++ T++ LI + R+D EI+ + + + +YT LIHG C+ A
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
MI G+ P +TF+++ L LR + + L + +
Sbjct: 272 DLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEV 317
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 97/185 (52%), Gaps = 10/185 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +++LI K ++ AE G+M+ RG+ P +TYN +++G C++ L+
Sbjct: 144 PDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLN----- 198
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A+++ D M + PDV +FS +++ Y +A + ++ M +GI T
Sbjct: 199 -----DAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT 253
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G ++ A++LL M+ +GV+P+ T+ +K+ A + ++
Sbjct: 254 YTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Query: 182 EDDLC 186
+ ++C
Sbjct: 314 KSEVC 318
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 123/259 (47%), Gaps = 11/259 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V +Y ++I CK A+ EM ++G+ P+V+TY+ +++ CR
Sbjct: 75 HVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRW------- 127
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+AE++ +M R I PDV +FS +++ + K + + M +GI PT TY
Sbjct: 128 ---TDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S++ C R+ DA+ +L M SP T++ Y K + M+++ +M
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ V N TY LI F + +D +++ N + S + + ++ ++ LC K++ +
Sbjct: 245 RGI-VANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELR 303
Query: 243 EACQYFVEMIEKGLLPQKV 261
+A ++ + + P+ V
Sbjct: 304 KAFAILEDLQKSEVCPRIV 322
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P Y S+I G+CK +R++ A+R L M + P+VVT++ L+NG C+
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK---------- 228
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + N ++F EM RGI + +++ ++H + + + D LN M G+ P T
Sbjct: 229 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYIT 288
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+ S++ LCS + A +L ++ ++ V P
Sbjct: 289 FQSMLASLCSKKELRKAFAILEDLQKSEVCP 319
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 15/240 (6%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M+E G P+VVT+ L+NG+C E + A + D M G +P +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLC----------CEGRVLQALALVDRMVEEGHQP----YGT 46
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+++ + + +L+ L+ M+E I V Y +++ LC G A+ L EM G
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
+ P TY+ + A +L R M E + P++ T++ LI + ++
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI-NPDVVTFSALINALVKEGKVSEA 165
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
EI+ + + +Y +I G C++ + +A + M K P VTF TL G
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 17/277 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y SLI+ R D AE + E+ E+G+ P+ +TYN+L+NG CR A
Sbjct: 359 PTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCA-------- 410
Query: 62 EKTIRNAEKVF---DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
NA+K F DEM GI+P +++ +LHV S+ ++ + + D + +G+ P
Sbjct: 411 -----NAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPD 465
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V + +++ CS ++ A ELL +M R V P T+N + + A +L+
Sbjct: 466 VIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFD 525
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+MK + P+ ++N LI + + + N + + + +Y L+ GLC+
Sbjct: 526 EMKRRGI-KPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
Q+ A + EM+ KG+ P T+ TL G+ + ++
Sbjct: 585 QEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNI 621
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 141/291 (48%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P ++ SL+ + K+NR + A EM ++ +V T+N+++N +C+
Sbjct: 183 LPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCK--------- 233
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E ++ A+ M G++P++ +++ ++H Y + + + + L MK + I P
Sbjct: 234 -EGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSF 292
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S++ +C GR+E+A ++ EMV+ G+ PSA YN + + + + A +M
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM 352
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P + TYN LI R D + ++ + D +Y +LI+G C
Sbjct: 353 LKKGIS-PTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCAN 411
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K+A EM+ G+ P K T+ +L L + + ++ L KK+ E +
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 142/295 (48%), Gaps = 28/295 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR-----ASLH 56
P+ Y SLI G CK R++ A + EM+++G+ P+ V YN L++G C + AS +
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348
Query: 57 PNERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+E +K I AE + E++ +GI PD +++I+++ Y R
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR 408
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + M GI PT TYTS++ L R+++A++L ++ GV P
Sbjct: 409 CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIM 468
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIH-TYNILIGMFMALNRMDMVREIWNH 215
+N + + GA +L + M D + VP T+N ++ +++ RE+++
Sbjct: 469 FNALIDGHCSNSNVKGAFELLKDM--DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+K + D S+ LI G + K+A + EM++ G P +T+ L +GL
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGL 581
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V M+ +LI G C + + A L +M V P+ VT+N ++ G CR
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR--------- 513
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A ++FDEM+ RGI+PD SF+ ++ YSR + + N M + G PTV
Sbjct: 514 -EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVL 572
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
TY ++V+ LC + AEELL EMV G++P TY
Sbjct: 573 TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTY 609
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 18/197 (9%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN------CFFKE 163
MKEKG+ PT+ T S++ R E A L EM R + S T+N C +
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236
Query: 164 YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223
+ KD G M E PNI TYN ++ + + R++ I +K ++
Sbjct: 237 LKKAKDFVGHM-------ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS---DMLRTWR 280
D +Y LI G+C++ + +EA + F EM++KGL P V + TL G DM ++
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK 349
Query: 281 R--LKKKLDEESITFGS 295
LKK + T+ S
Sbjct: 350 DEMLKKGISPTMSTYNS 366
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 100/206 (48%), Gaps = 11/206 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P K YTSL++ K NR+ A+ ++ GV P+V+ +N L++G C ++
Sbjct: 429 PTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSN------- 481
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A ++ +M + PD +F+ ++ + R K + + + + MK +GI P +
Sbjct: 482 ---VKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHIS 538
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ G I+DA + EM+ G +P+ TYN + ++ + A +L ++M
Sbjct: 539 FNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMV 598
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMD 207
+ P+ TY LI +N D
Sbjct: 599 SKGM-TPDDTTYFTLIEGIAKVNIPD 623
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 23/286 (8%)
Query: 13 GWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RRASLHPNERFEKTIRNAEK 70
G N I FL +R + + ++ L+ C RA +E FE
Sbjct: 125 GGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRA----DEAFE-------- 172
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
F M+ +G+ P + + + +L ++ + ++ + + M I +V T+ ++ LC
Sbjct: 173 CFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLC 232
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAM--KLYRQMKEDDLC 186
G+++ A++ +G M +GV P+ TYN Y GR +A A+ + RQ E
Sbjct: 233 KEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE---- 288
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+ TY LI R++ +I+ + L Y LI G C K A
Sbjct: 289 -PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
Y EM++KG+ P T+ +L L + K++ E+ I+
Sbjct: 348 YKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 144/299 (48%), Gaps = 11/299 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ ++TSL+YG C I++ + A EM+ +G+ PNVV +N ++ +C
Sbjct: 447 PNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCT---------- 496
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A+++ D M G PD+ S++ ++ + K + L+ M G+ P T
Sbjct: 497 EGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECT 556
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C GRI+DA + EM+ NG++P TYN + + A +LY M
Sbjct: 557 YNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMI 616
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+I+TYNI++ N +D +++ + +L +D+ ++ ++I L + +
Sbjct: 617 TSGK-QWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRK 675
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
++A F + GL+P T+ + LI+ L + + ++++ S N+
Sbjct: 676 EDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNF 734
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 141/316 (44%), Gaps = 46/316 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y ++I G+ ++D A +M ++G+ PNVVTY ++++G+C+
Sbjct: 202 PNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCK---------- 251
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + AE VF +M +G+ P++ +++ ++H Y + + + L M G+ P T
Sbjct: 252 AQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFT 311
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD------------ 169
Y ++ LC G+ +A +L M+R G+ P Y Y +
Sbjct: 312 YGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMV 371
Query: 170 ANG-----------------------AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
NG AM ++ +M++ L PN+ Y LI L R+
Sbjct: 372 GNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLS-PNVVNYATLIDALCKLGRV 430
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D +N + + ++ +T L++GLC KW++A + F EM+ +G+ P V F T+
Sbjct: 431 DDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTI 490
Query: 267 YRGLIQSDMLRTWRRL 282
L + +RL
Sbjct: 491 MCNLCTEGRVMKAQRL 506
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 19/303 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +Y +++G+ + FL M+ G+ PN +N++ ++A
Sbjct: 342 PDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKA-------- 393
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A +F++MR +G+ P+V +++ ++ + + + K N M +G+ P +
Sbjct: 394 --MIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVV 451
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+TS+V LC+ + E A EL EMV G+ P+ +N A +L M+
Sbjct: 452 FTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLME 511
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P+I +YN LI + + D ++ + + L + +Y L+HG C +
Sbjct: 512 RVG-TRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRI 570
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK--KKLDEESITFGSEFQN 299
+A F EM+ G+ P VT+ T+ GL ++ RR K+L IT G ++
Sbjct: 571 DDAYSVFQEMLSNGITPVVVTYNTILHGLFKT------RRFSEAKELYLNMITSGKQWSI 624
Query: 300 YHF 302
Y +
Sbjct: 625 YTY 627
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 132/328 (40%), Gaps = 45/328 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLG--------------------------------- 28
P+V Y+ L+ +C++ R++ G
Sbjct: 92 PDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMG 151
Query: 29 ----EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84
M E G PNVV+YN LL G C R E+ + + D +VR P++
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFCDE------NRAEEALELLHMMADG-QVRSCPPNL 204
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
S++ V++ + + + + M ++GI P V TYT V+ LC ++ AE + +
Sbjct: 205 VSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQ 264
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
M+ GV P+ TY C Y +++ ++M L P+ TY +L+
Sbjct: 265 MIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGL-EPDCFTYGLLLDYLCKKG 323
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+ R++++ + + D+ Y +++HG K E + M+ G+ P F
Sbjct: 324 KCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFN 383
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDEESIT 292
++ + M+ + K+ ++ ++
Sbjct: 384 IVFCAFAKKAMIGEAMDIFNKMRQQGLS 411
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 123/275 (44%), Gaps = 8/275 (2%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+D A + E + +++ +N LL V + + E + ++ + +
Sbjct: 31 VDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDCCSK- 89
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG-ICPTVATYTSVVKCLCSCGRIEDA 138
+ PDV ++SI++ + R + + + + G V ++K LC R+ +A
Sbjct: 90 VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149
Query: 139 EE-LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL--CVPNIHTYNI 195
LL M G +P+ +YN K + A A++L M + + C PN+ +YN
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
+I F ++D ++ + + ++ +YT++I GLC+ Q A F +MI+KG
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ P VT+ L G + + W+ + + L E S
Sbjct: 270 VRPNIVTYTCLIHGYLS---IGQWKEVVRMLKEMS 301
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV--CRRASLHPNE 59
PN Y +L++G+C+ RID A EM+ G+ P VVTYN +L+G+ RR S E
Sbjct: 552 PNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFS-EAKE 610
Query: 60 RFEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ I + A K+F + + ++ D+ +F+I++
Sbjct: 611 LYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALL 670
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + +++ + G+ P V TY + + L G +E+ + + EM ++G +P++
Sbjct: 671 KDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSL 730
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
N + R D + A ++ E + + T ++LI +F
Sbjct: 731 MLNFLVRRLLLRGDISRAGAYLSKIDEKNFSL-EASTTSMLISLF 774
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 144/301 (47%), Gaps = 27/301 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
PN+ ++SLI G CKI I A L EM+ +G +PNV T+ L++G+C++ R
Sbjct: 296 PNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRL 355
Query: 61 FEKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
F K +R+ AE + M+ +G+ P+ +++ ++ +
Sbjct: 356 FLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHC 415
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A + + ++ M ++G P + TY +++ LC GR +A +LL +++G+
Sbjct: 416 KAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKV 475
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY E+ + D A+ ++ +M + L P++HTYN+LI F +++ +++
Sbjct: 476 TYTILISEFCRQTDNKQALAIFSRMFKVGL-QPDMHTYNVLIATFCRQKKVEESEKLFEE 534
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
G L ++YT +I G C A ++F +M + G P +T+ L GL
Sbjct: 535 AVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESK 594
Query: 276 L 276
L
Sbjct: 595 L 595
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 126/290 (43%), Gaps = 50/290 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YT LI G CK A + M + G PN+ TYN +++G+C++ R
Sbjct: 401 VPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKG------R 454
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F + A K+ G+ D +++I++ + R + +L + M + G+ P +
Sbjct: 455 FPE----AYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMH 510
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ C ++E++E+L E V G+ P+ ETY Y + A+K + +M
Sbjct: 511 TYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKM 570
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ D C P D +Y LI GLC + K
Sbjct: 571 R-DYGCKP-----------------------------------DSITYGALISGLCNESK 594
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL-YRGLIQSD---MLRTWRRLKKKL 286
EACQ + MI+ GL P +VT TL Y Q D + RL+KKL
Sbjct: 595 LDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKL 644
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 153/361 (42%), Gaps = 67/361 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIER--------------------------- 33
+P+ Y ++ G+C++ RI +R+L +MIER
Sbjct: 225 VPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFW 284
Query: 34 --------GVEPNVVTYNVLLNGVCRRASL-HPNERFEKTIRNA---------------- 68
G+ PN++ ++ L+NG+C+ S+ E E+ +R
Sbjct: 285 YFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLC 344
Query: 69 -----EKVF----DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
EK F +R +P+V +++ +++ Y + K + L MKE+G+ P
Sbjct: 345 KKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNT 404
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYT ++ C G A EL+ M + G +P+ TYN + A KL R+
Sbjct: 405 NTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRR 464
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ L + TY ILI F I++ + L D+ +Y +LI C ++
Sbjct: 465 GLKSGLHADKV-TYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFG 294
K +E+ + F E + GLLP K T+ ++ G + + + + K+ + +SIT+G
Sbjct: 524 KVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYG 583
Query: 295 S 295
+
Sbjct: 584 A 584
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 19/281 (6%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+D AE+ EM++R V P+ +Y +++ G CR + +R+ K +M RG
Sbjct: 209 VDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLK----------DMIERG 258
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
D + ++++ +S + + G+ P + ++S++ LC G I+ A
Sbjct: 259 YAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAF 318
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
E+L EMVR G P+ T+ + A +L+ ++ D PN++TY +I
Sbjct: 319 EMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMING 378
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ +++ + +K L + ++YT LI G C+ + A + M ++G P
Sbjct: 379 YCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPN 438
Query: 260 KVTFETLYRGLIQS-------DMLRTWRRLKKKLDEESITF 293
T+ + GL + +LR R LK L + +T+
Sbjct: 439 IFTYNAIIDGLCKKGRFPEAYKLLR--RGLKSGLHADKVTY 477
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 112/250 (44%), Gaps = 15/250 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT LI +C+ A M + G++P++ TYNVL+ CR +K +
Sbjct: 477 YTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCR----------QKKVE 526
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+EK+F+E G+ P +++ ++ Y R ++ + M++ G P TY +++
Sbjct: 527 ESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALI 586
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC+ ++++A +L M+ NG+SP T EY + D+ AM + ++++
Sbjct: 587 SGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLW- 645
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
I T N LI + ++ + ++ + +L +D + E K+
Sbjct: 646 ---IRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTACYESNKFALVSD 702
Query: 247 YFVEMIEKGL 256
E I KG+
Sbjct: 703 -LSERISKGI 711
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + YTS+I G+C+ I A +F +M + G +P+ +TY L++G+C
Sbjct: 541 LPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCN--------- 591
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A ++++ M G+ P + + + Y + ++ L +++K TV
Sbjct: 592 -ESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVN 650
Query: 121 TYTSVVKCLCS 131
T +++ LCS
Sbjct: 651 T---LIRKLCS 658
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 152/289 (52%), Gaps = 11/289 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y+SL++G+C +++ ++R EM+++GV+PN+V +NVL++ +C+ +
Sbjct: 195 IPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKI----- 249
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +A K+F M +G E + S++I+++ Y + K + +++ N M + G P V
Sbjct: 250 --GDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVK 307
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY++++ L G++ DA +L G M +G+S + Y F AM+L+ ++
Sbjct: 308 TYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNEL 367
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + + + +Y+ LI ++++ E + + L ++ + ++IHG C ++
Sbjct: 368 KSYNFKL-DFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQ 426
Query: 241 WKEACQYF---VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A F +M E G P +T+ TL RG +S+ L L K+
Sbjct: 427 VDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 475
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 144/328 (43%), Gaps = 52/328 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVL---LNGVCRRASLHPN 58
P++ L C +NR+ + ++ RG P++VTYN L L G+C+ H +
Sbjct: 123 PDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVG--HED 180
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
E A+++F+EM+ +G+ P+V S+S ++H + A K + S N M ++G+ P
Sbjct: 181 E--------AKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPN 232
Query: 119 VATYTSVVKCLCSCGRIED---AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
+ + ++ LC G+I D A +L M G + +Y Y AM
Sbjct: 233 LVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMN 292
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR------------------------- 210
LY +M + PN+ TY+ L+ + ++
Sbjct: 293 LYNEMPQVGK-RPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGL 351
Query: 211 ----------EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
E++N +K LD +SY+ LI GLC+ K + A ++F ++ ++GL P
Sbjct: 352 CKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNV 411
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKLDE 288
VT + G + + + L +K+++
Sbjct: 412 VTCNIMIHGFCRVEQVDKANILFEKMEK 439
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 135/289 (46%), Gaps = 19/289 (6%)
Query: 15 CKINRIDM--AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
CK ID+ A F M+ P + ++N LL G+ + H ++ F ++
Sbjct: 64 CKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKIN--HYSQLFS--------LY 113
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK---CL 129
++MR+ G+ PD+ + +I+ + ++ L + + +G P + TY +++K L
Sbjct: 114 NKMRLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGL 173
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C G ++A+E+ EM G+ P+ +Y+ + + +L+ +M + + PN
Sbjct: 174 CKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGV-QPN 232
Query: 190 IHTYNILIGMFM---ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+ +N+LI + + + R+++ + + SYT+LI+G C+ K +EA
Sbjct: 233 LVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMN 292
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
+ EM + G P T+ TL GL+Q+ + +L + I+ S
Sbjct: 293 LYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDS 341
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PNVK Y++L+ G + ++ A + G M G+ + Y + L+G+C+ L
Sbjct: 304 PNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMEL 363
Query: 58 -NE--------RFEKTIR------NAEKV------FDEMRVRGIEPDVTSFSIVLHVYSR 96
NE FE R A KV F ++ G++P+V + +I++H + R
Sbjct: 364 FNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCR 423
Query: 97 AH---KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147
K + +K+ M+E G P + TY ++++ C ++E+ LL +M +
Sbjct: 424 VEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFK 477
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 131/273 (47%), Gaps = 30/273 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + L+ +CK R+ A+ L M+++G++P+VVTYN L++ C
Sbjct: 309 PDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYC----------L 358
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+ +F+ M RG+ +V S+SI+++ + + ++ M K I P V T
Sbjct: 359 VNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVIT 418
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ LC GRI A EL EM G P T L RQ+K
Sbjct: 419 YSSLIDGLCKSGRISYALELNDEMHDRGQQPDIIT-------------------LTRQLK 459
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN+ TY ILI R++ R I+ + + +++YT++IHG C K +
Sbjct: 460 DQGI-RPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLF 518
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA +M + +P VT+E + R L +D
Sbjct: 519 DEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDND 551
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 114/229 (49%), Gaps = 11/229 (4%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
++PN+V YN +++ +C+ +K +A ++ EM + I PDV +++ +++ +
Sbjct: 237 LQPNLVMYNTIIDSMCK----------DKLDNDAFDLYSEMVSKRIFPDVNTYNALINGF 286
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
K + ++ N M + I P V T+ +V C GR+++A+ L M++ G+ P
Sbjct: 287 CIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDV 346
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TYN Y + N A ++ M + N+ +Y+I+I F + +D +++
Sbjct: 347 VTYNSLMDRYCLVNEVNKAKSIFNTMSHRGV-TANVRSYSIMINRFCKIKMVDQAMKLFK 405
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
+ ++ ++ +Y+ LI GLC+ + A + EM ++G P +T
Sbjct: 406 EMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITL 454
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 76 RVRG--IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
RV G ++P++ ++ ++ + + D + M K I P V TY +++ C G
Sbjct: 231 RVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVG 290
Query: 134 RIEDAEELLGEMVRNGVSPSAETYN----CFFKEYRGRKDANG-AMKLYRQMKEDDLCVP 188
+++DA L +M ++P T+N F KE R ++ NG AM + + +K P
Sbjct: 291 KLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIK------P 344
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
++ TYN L+ + +N ++ + I+N + + ++ SY+++I+ C+ + +A + F
Sbjct: 345 DVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLF 404
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQS 273
EM K + P +T+ +L GL +S
Sbjct: 405 KEMHHKQIFPNVITYSSLIDGLCKS 429
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG----------------VEPNVVTYNVL 45
PNV Y+SLI G CK RI A EM +RG + PN+ TY +L
Sbjct: 414 PNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTIL 473
Query: 46 LNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLD 105
++G+C+ L +A +F+++ V+G V ++++++H + ++
Sbjct: 474 IDGLCKGGRLE----------DARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMT 523
Query: 106 KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
L+ MK+ P TY +++ L + AE
Sbjct: 524 LLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFF 560
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 146/309 (47%), Gaps = 22/309 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN--- 58
PNV Y L+ CK N++D A++ L EM +G PN V+Y +++ +C +
Sbjct: 178 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQL 237
Query: 59 -ERFEKTI----------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
ERFE + + ++ EM +GI P+V S+S +++ S + + +
Sbjct: 238 AERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIE 297
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCF 160
L+ L M ++G P + T +S+VK G DA ++ +M+R G+ P+ YN
Sbjct: 298 LAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTL 357
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
+ + + + A+ ++ M+E C PNI TY LI F ++ IWN + S
Sbjct: 358 VQGFCSHGNIDKAVSVFLHMEEIG-CSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSG 416
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR 280
++ YT ++ LC K+KEA M ++ P TF +GL + L
Sbjct: 417 CCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 476
Query: 281 RLKKKLDEE 289
++ ++++++
Sbjct: 477 KVFRQMEQQ 485
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 135/295 (45%), Gaps = 34/295 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------- 54
PNV Y++LI +I++A L +M++RG PN+ T + L+ G R +
Sbjct: 278 PNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDM 337
Query: 55 ---------LHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
L PN T I A VF M G P++ ++ +++ ++
Sbjct: 338 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFT 397
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + ++ N M G CP V YTS+V+ LC + ++AE L+ M + +PS
Sbjct: 398 KRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVP 457
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD----MVRE 211
T+N F K + A K++RQM++ C PNI TYN L+ NR++ + RE
Sbjct: 458 TFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 517
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
I+ ++G E +Y L+HG C A Q +M+ G P ++T +
Sbjct: 518 IF--MRGVE--WSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMI 568
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 129/303 (42%), Gaps = 44/303 (14%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
++ S+I + ++ + A + E G +P+V YN +L+ + E I
Sbjct: 112 LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLG----------ENRI 161
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+ V+ +M+ G EP+V +++++L + +K + L M KG CP +YT+V
Sbjct: 162 QMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTV 221
Query: 126 VKCLCSCGRIEDAE------------------------------ELLGEMVRNGVSPSAE 155
+ +C G +++ EL+ EMV G+SP+
Sbjct: 222 ISSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVI 281
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWN 214
+Y+ E A L QM + C PNIHT + L+ G F+ D + ++WN
Sbjct: 282 SYSTLINELSNSGQIELAFSLLAQMLKRG-CHPNIHTLSSLVKGCFVRGTTFDAL-DMWN 339
Query: 215 H-VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++G L ++ +Y L+ G C +A F+ M E G P T+ +L G +
Sbjct: 340 QMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKR 399
Query: 274 DML 276
L
Sbjct: 400 GSL 402
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ + + + +M+++G F V+ VY + + +++ +KE G P+V Y
Sbjct: 91 VDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNH 150
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
V+ L RI+ + +M R+G P+ TYN K +GA KL +M
Sbjct: 151 VLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG 210
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS----YTMLIHGLCEKQK 240
C PN +Y +I ++ + MV+E G +L + Y LI+GLC+++
Sbjct: 211 -CCPNAVSYTTVIS---SMCEVGMVKE------GRQLAERFEPVVSVYNALINGLCKERD 260
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+K + EM+EKG+ P +++ TL L S +
Sbjct: 261 YKGGVELMSEMVEKGISPNVISYSTLINELSNSGQI 296
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 128/328 (39%), Gaps = 68/328 (20%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +L+ G+C ID A M E G PN+ TY L+NG +R SL
Sbjct: 349 PNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLE----- 403
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++++M G P+V ++ ++ R K + + + M ++ P+V T
Sbjct: 404 -----GAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPT 458
Query: 122 YTSVVKCLCSCGR------------------------------------IEDAEELLGEM 145
+ + +K LC GR IE+A L E+
Sbjct: 459 FNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 518
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM---- 201
GV S TYN A++L +M + P+ T N++I +
Sbjct: 519 FMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKS-PDEITMNMIILAYCKQGK 577
Query: 202 ---ALNRMDMV---REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
A+ +D+V R W D+ SYT +I GLC ++ F MI +
Sbjct: 578 AERAVQMLDLVSCGRRKWRP--------DVISYTNVIWGLCRSNCREDGVILFERMISER 629
Query: 256 LLP-QKVTFETLYRGLIQSDMLRTWRRL 282
++P + + R I +D+L W R
Sbjct: 630 IIPILRSVCQEAARMTIPNDVL--WLRF 655
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T T+ +++ L G+++ + LL +M G S + + YR A A++++
Sbjct: 74 TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMF 133
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
++KE C P++ YN ++ + NR+ M+ ++ +K ++ +Y +L+ LC+
Sbjct: 134 YRIKEFG-CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK 192
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
K A + VEM KG P V++ T+ + + M++ R+L ++ +
Sbjct: 193 NNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFE 242
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 141/302 (46%), Gaps = 11/302 (3%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y +LI G+C+I ++ A +M R + P+ +TYN L+NG+ + ER I
Sbjct: 365 IYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKV------ER----I 414
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
A + EM G+ P V +F+ ++ Y RA + + L+ M+EKG+ P V +Y S+
Sbjct: 415 TEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSI 474
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
V C G+I +A +L +M V P A+ YN Y + A L +MK +
Sbjct: 475 VNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGV 534
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
P+I TYN+LI +++ E+ + ++ L D+ SY LI C + A
Sbjct: 535 -PPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRAL 593
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPY 305
+ EM + G+ P T+ L+ L + + L +++ ++ + S N Y
Sbjct: 594 ELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAY 653
Query: 306 RR 307
+
Sbjct: 654 AK 655
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 128/266 (48%), Gaps = 11/266 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y ++I G K ++ R +M+ G++PNV+TYNVLL+G+CR R
Sbjct: 220 VPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAG------R 273
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+T V DEM R + PD ++SI+ +SR Q L +KG+
Sbjct: 274 MGET----AAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY 329
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T + ++ LC G+I AEE+L +V +G+ + YN Y D GA +++QM
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K L P+ TYN LI + R+ ++ ++ + + ++++ LI +
Sbjct: 390 KS-RLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQ 448
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
++ +M EKGL P V++ ++
Sbjct: 449 LEKCFIILSDMQEKGLKPNVVSYGSI 474
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 14/213 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ + +LI + + +++ L +M E+G++PNVV+Y ++N C+
Sbjct: 431 PSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGK------- 483
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + D+M ++ + P ++ ++ Y + MK G+ P++ T
Sbjct: 484 ---ILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVT 540
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++K LC +I +AEELL + G++P +YN R + + A++L ++M
Sbjct: 541 YNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMW 600
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
+ + P+ TY +L F +L V E+ N
Sbjct: 601 KCGI-KPSPRTYRML---FSSLGGAGRVHEMEN 629
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 10/187 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P ++Y ++I + + D A +M GV P++VTYN+L+ G+C+++
Sbjct: 500 LPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQ------ 553
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I AE++ D +R G+ PDV S++ ++ +L+ M + GI P+
Sbjct: 554 ----ISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPR 609
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY + L GR+ + E L +M+ V P + YN Y + + L ++M
Sbjct: 610 TYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEM 669
Query: 181 KEDDLCV 187
+ + V
Sbjct: 670 SDKGIAV 676
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 115/271 (42%), Gaps = 11/271 (4%)
Query: 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN +YNV++ G+ + T +A K+FDEM + + P+ +++ ++ + +
Sbjct: 186 PNAFSYNVVIAGLWKAG----------TDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIK 235
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + M G+ P V TY ++ LC GR+ + +L EM + P T
Sbjct: 236 KGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFT 295
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ F + D+ + L+ + + + + +T +IL+ ++ E+ +
Sbjct: 296 YSILFDGHSRTGDSQTMLSLFEESVKKGVKI-GAYTCSILLNGLCKDGKISKAEEVLQTL 354
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
S L Y LI+G C+ + A F +M + + P +T+ L GL + + +
Sbjct: 355 VNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERI 414
Query: 277 RTWRRLKKKLDEESITFGSEFQNYHFKPYRR 307
L ++++ + E N Y R
Sbjct: 415 TEAHDLVIEMEKNGVNPSVETFNTLIDAYGR 445
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 8/186 (4%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV-SPSAETYNCFFKE-YRGRKDANGAM 174
P T+ V+ G +++A +L M +G +P+A +YN ++ D + A+
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCD-AV 208
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
KL+ +M E + VPN TYN +I + ++ +W+ + L ++ +Y +L+ G
Sbjct: 209 KLFDEMPEKAV-VPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSG 267
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
LC + E EM + ++P T+ L+ G ++ +T L EES+ G
Sbjct: 268 LCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLF----EESVKKG 323
Query: 295 SEFQNY 300
+ Y
Sbjct: 324 VKIGAY 329
>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 139/285 (48%), Gaps = 17/285 (5%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y +LI G+C+ RID A + M G +P++VTYNVLLN C E
Sbjct: 222 VYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCN----------EFMF 271
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLS-LDKLNFMKEKGICPTVATYTS 124
A K+ +M IEPDV S++ +L + +A+ P + L + M KG C V +Y +
Sbjct: 272 EEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCDVV-SYNT 330
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++K CS A +L EM R G++P T+ K + +++ A KL M
Sbjct: 331 IIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMG 390
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
L +P+ Y +I +++M I+ + + D+ SY LI+G C+ + E
Sbjct: 391 L-LPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEV 449
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK 285
+ +M+++G P +VT++ + L++ SD R W ++ ++
Sbjct: 450 MHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMER 494
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 13/235 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFL-GEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P+V Y L+ CK N D A F+ +M+ +G +VV+YN ++ C S+ N R
Sbjct: 288 PDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGF-CDVVSYNTIIKAFC---SISNNRR 343
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+F+EM +GI PDV +F+I++ + R ++ L+ M G+ P
Sbjct: 344 -------AYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRI 396
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT+++ C G++E A + +MV G++P +YN + M LY QM
Sbjct: 397 FYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQM 456
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
+ P+ TY ++IG + N++ +W+ + L LD MLI+ +
Sbjct: 457 LQRG-SFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLINAI 510
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 121/311 (38%), Gaps = 52/311 (16%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+ I G C+ + L +M + P++ +N+ LN + R E
Sbjct: 82 YSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFR----------ENREE 131
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP--------- 117
+A +VF M RG EPDV +F+I++ + K ++ M +KGI P
Sbjct: 132 SALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALA 191
Query: 118 ---------------------------TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+ Y +++ C GRI+ A ++ M R G
Sbjct: 192 VGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGC 251
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
P TYN A+KL ++M E P++++YN L+ N D
Sbjct: 252 KPDLVTYNVLLNYCCNEFMFEEAVKLLKKM-ECSAIEPDVYSYNQLLKAHCKANHPDKAY 310
Query: 211 EIWNHVKGSELGL-DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ K G D+ SY +I C + A + F EM KG+ P VTF L +
Sbjct: 311 -LFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKA 369
Query: 270 LIQ---SDMLR 277
++ SDM +
Sbjct: 370 FLREGNSDMAK 380
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 14/117 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YT++I CK +++MA +M+E+G+ P+VV+YN L+NG C
Sbjct: 392 LPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFC---------- 441
Query: 61 FEKTIRNAE--KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
K++R E ++++M RG PD ++ +++ R +K + + M E+G+
Sbjct: 442 --KSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGL 496
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + L R + A +M G S S+ TY+ F K+ L + M
Sbjct: 47 YNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDM- 105
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E CVP+I +NI + + NR + E++ + D+ ++T++I GLC+ +K+
Sbjct: 106 EKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKF 165
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A Q+++ M++KG+ P L GL
Sbjct: 166 DAAVQFWLNMLDKGIRPDNKACVALAVGL 194
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 155/350 (44%), Gaps = 61/350 (17%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF- 61
N Y +LI G CK I+ A + L EM +G EP+ +TYN +L+G+CR + ++F
Sbjct: 79 NTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFF 138
Query: 62 ------------------------EKTIRNAEKVFDEMRV--RGIEPDVTSFSIVLHVYS 95
E + A +F M + R + PD+ +++ ++ +
Sbjct: 139 DSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFC 198
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
R K ++ + KG P TY S++ L +++AEE+ +MV +G +P+
Sbjct: 199 RVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGA 258
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKE--------------DDLC--------------- 186
TY+ + + ++LY +M E D LC
Sbjct: 259 TYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEM 318
Query: 187 -----VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
VP++ TYNIL+ N +D E+++ + + D+ SY+++++GLC+ K
Sbjct: 319 SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 378
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+A F MIE+ L+P VTF L GL ++ L + L + E ++
Sbjct: 379 HDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNV 428
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 142/292 (48%), Gaps = 21/292 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + ++I CK ++D A + L EM + G P+VVTYN+LL+G+C+
Sbjct: 290 PDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKT--------- 340
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++F M G PD+ S+S+VL+ + +K + + M E+ + P V T
Sbjct: 341 -NLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVT 399
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G++++A++LL M + V P T K + A++L++ M
Sbjct: 400 FNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMV 459
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS--ELGLDLDSYTMLIHGLCEKQ 239
E V ++ +NI++ ++ + + S E D+ +YT L++ L E
Sbjct: 460 EKGT-VADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAG 518
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL------IQSDMLRTWRRLKKK 285
+ +A YF +M G P V + TL GL IQ+D R + +K+K
Sbjct: 519 RVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQAD--RLTQAMKEK 568
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 15/272 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y S++ G + + +D AE +M++ G PN TY+++L+G CR ++
Sbjct: 219 MPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNM----- 273
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++++EM + PDV + V+ + +A K + L M + G P V
Sbjct: 274 -----ARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVV 328
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC ++ A EL MV NG +P +Y+ + A L+ +M
Sbjct: 329 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 388
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E L VP++ T+NIL+ ++D +++ + + + D + T L+HGLC ++
Sbjct: 389 IERKL-VPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKR 447
Query: 241 WKEACQYFVEMIEKG----LLPQKVTFETLYR 268
EA + F M+EKG +LP + L R
Sbjct: 448 TDEAVRLFQYMVEKGTVADVLPHNIVLAGLCR 479
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 11/258 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y L+ G CK N +D A M++ G P++V+Y+V+LNG+C+ +H
Sbjct: 324 VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVH---- 379
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A +FD M R + PDV +F+I++ +A K + D L+ M E + P
Sbjct: 380 ------DARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGV 433
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQ 179
T T+++ LC R ++A L MV G +N R K A +
Sbjct: 434 TCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSM 493
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+K D P++ TY L+ + R+D + + + GS D +Y L++GL ++
Sbjct: 494 VKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQG 553
Query: 240 KWKEACQYFVEMIEKGLL 257
+ +A + M EKG L
Sbjct: 554 RHIQADRLTQAMKEKGFL 571
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 140/308 (45%), Gaps = 28/308 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+V YT ++ C+ ++D A+ +MIERG N V YN L+NG+C+ ++
Sbjct: 43 PDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKL 102
Query: 56 ---------HPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P+ TI A++ FD M RG PDV +++ +L +
Sbjct: 103 LEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYK 162
Query: 97 AHKPQLS--LDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
K + L K M ++ + P + TY +++ C + ++A +L +++ G P
Sbjct: 163 EGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDT 222
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TYN + + + A +++++M D C PN TY+I++ + M E++
Sbjct: 223 VTYNSILLGLARKSNMDEAEEMFKKMV-DSGCAPNGATYSIVLSGHCRVGNMARCLELYE 281
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ D+ +I LC+ +K +A + EM + G +P VT+ L GL +++
Sbjct: 282 EMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTN 341
Query: 275 MLRTWRRL 282
++ L
Sbjct: 342 LVDKAHEL 349
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 122/269 (45%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I G CK ++ A + EM E+GV P+V TY ++++ +CR
Sbjct: 8 PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK------- 60
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++F +M RG + +++ +++ + + + L M KG P T
Sbjct: 61 ---VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNIT 117
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G++ +A++ M G SP YN A L++ M
Sbjct: 118 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177
Query: 182 -EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D P++ TYN LI F + + D +++ V D +Y ++ GL K
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 237
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA + F +M++ G P T+ + G
Sbjct: 238 MDEAEEMFKKMVDSGCAPNGATYSIVLSG 266
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 20/275 (7%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M E+G EP+VVTY+ +++G+C+ + A ++ +EM +G+ PDV +++I
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGK----------VTEALEMVEEMTEKGVNPDVATYTI 50
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ RA K + + + M E+G Y +++ LC IE A +LL EM G
Sbjct: 51 IVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG 110
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P TYN + A + + M P++ YN G+ AL + V
Sbjct: 111 YEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYS-PDVVAYN---GLLDALYKEGKV 166
Query: 210 REIWNHVKGSEL-----GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
E W K ++ DL +Y LI G C +K EA + F ++I KG +P VT+
Sbjct: 167 AEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYN 226
Query: 265 TLYRGLI-QSDMLRTWRRLKKKLDEESITFGSEFQ 298
++ GL +S+M KK +D G+ +
Sbjct: 227 SILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYS 261
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 11/257 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + +LI G+C +A + M+E GV+PNVVT+N L+NG C+ LH
Sbjct: 258 PNVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLH----- 312
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +VF+EM+V ++P V +++ +L+ Y + ++ + M G+ + T
Sbjct: 313 -----EANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILT 367
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G+ + A + E+ + + P+A T++ R ++ A +YR M
Sbjct: 368 YNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSMV 427
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN T+ +LI F D ++ + G + DL + + L GLC K
Sbjct: 428 RSG-CSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKN 486
Query: 242 KEACQYFVEMIEKGLLP 258
+ A EM + LLP
Sbjct: 487 QLALALCSEMEVRRLLP 503
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 116/274 (42%), Gaps = 12/274 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNER 60
P V+ + + ++ R D+A F E+ R V PNV T N+++ C +
Sbjct: 187 PTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPNVYTLNMIIRAYCMLGEV----- 241
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K EK+ D G+ P+V SF+ ++ Y L+L + M E G+ P V
Sbjct: 242 -QKGFDMLEKMMD----MGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVV 296
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ +++ C ++ +A + EM V PS TYN Y D+ +++Y +M
Sbjct: 297 TFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEM 356
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L +I TYN LI + + L + +++ LI G C +
Sbjct: 357 MRNGLKA-DILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNN 415
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ A + M+ G P TF+ L +++
Sbjct: 416 SERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNE 449
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 132/294 (44%), Gaps = 12/294 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNG--VCRRASLHPNERFEKT 64
++ L++ K + ++FL + + P ++ LL +C +S + KT
Sbjct: 106 HSILLHTLSKHRQFKTTQKFLTQTLSS--HPPHTLFDALLFSYRLCNSSSPLVFDSLFKT 163
Query: 65 I------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG-ICP 117
+ R+A ++ M+ G P V S + L R + ++L ++ + + P
Sbjct: 164 LAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSP 223
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V T +++ C G ++ ++L +M+ G+SP+ ++N Y + A+K+
Sbjct: 224 NVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVK 283
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
M E+ + PN+ T+N LI F ++ ++N +K + + + +Y L++G +
Sbjct: 284 SLMVENGV-QPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQ 342
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ + + EM+ GL +T+ L GL + + ++LD+E++
Sbjct: 343 VGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENL 396
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 96/236 (40%), Gaps = 21/236 (8%)
Query: 86 SFSIVLHVYSR----------------AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+ SI+LH S+ +H P D L F + + S+ K L
Sbjct: 105 THSILLHTLSKHRQFKTTQKFLTQTLSSHPPHTLFDALLFSYRLCNSSSPLVFDSLFKTL 164
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
+ A + M +G SP+ ++ N F + A+ A+ YR+++ PN
Sbjct: 165 AHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPN 224
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
++T N++I + L + ++ + L ++ S+ LI G C K + A +
Sbjct: 225 VYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKS 284
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDML----RTWRRLK-KKLDEESITFGSEFQNY 300
M+E G+ P VTF TL G + L R + +K +D +T+ + Y
Sbjct: 285 LMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGY 340
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +++LI G C N + A M+ G PN T+ +L++ C+ NE
Sbjct: 397 VPNASTFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCK------NED 450
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
F+ A +V +M R + PD+++ S + R K QL+L + M+ + + P
Sbjct: 451 FD----GAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALALCSEMEVRRLLP 503
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 139/283 (49%), Gaps = 11/283 (3%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
+LI +I +++A E+ GV NV T N+++N +C+ + F
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTF------- 257
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
+++ +G+ PD+ +++ ++ YS + + + +N M KG P V TY +V+
Sbjct: 258 ---LSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 314
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC G+ E A+E+ EM+R+G+SP + TY E + D K++ M+ D+ VP
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV-VP 373
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
++ ++ ++ +F +D +N VK + L D YT+LI G C K A
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM+++G VT+ T+ GL + ML +L ++ E ++
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 137/307 (44%), Gaps = 46/307 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y ++I G CK + + A+ EM+ G+ P+ TY LL C++
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD------- 355
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ EKVF +MR R + PD+ FS ++ +++R+ +L N +KE G+ P
Sbjct: 356 ---VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK------------- 168
YT +++ C G I A L EM++ G + TYN RK
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 169 ----------------------DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+ AM+L+++MKE + + ++ TYN L+ F + +
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL-DVVTYNTLLDGFGKVGDI 531
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D +EIW + E+ SY++L++ LC K EA + + EMI K + P + ++
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 267 YRGLIQS 273
+G +S
Sbjct: 592 IKGYCRS 598
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 139/313 (44%), Gaps = 30/313 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P++ Y +LI + ++ A + M +G P V TYN ++NG+C+
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 52 -----RASLHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R+ L P+ ++ + EKVF +MR R + PD+ FS ++ +++R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +L N +KE G+ P YT +++ C G I A L EM++ G + T
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN RK A KL+ +M E L P+ +T ILI L + E++ +
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERAL-FPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ---- 272
K + LD+ +Y L+ G + A + + +M+ K +LP +++ L L
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 273 SDMLRTWRRLKKK 285
++ R W + K
Sbjct: 567 AEAFRVWDEMISK 579
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 151/324 (46%), Gaps = 28/324 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP--- 57
+P+ +YT LI G+C+ I +A EM+++G +VVTYN +L+G+C+R L
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 58 --NERFEKTI--------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
NE E+ + +NA ++F +M+ + I DV +++ +L +
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + M K I PT +Y+ +V LCS G + +A + EM+ + P+
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
N K Y +A+ +M + VP+ +YN LI F+ M +
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGF-VPDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 216 VKGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ + GL D+ +Y ++HG C + + KEA +MIE+G+ P + T+ + G +
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
Query: 274 DMLRTWRRLKKKLDEESITFGSEF 297
D L R+ ++ + + +F
Sbjct: 706 DNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F +++ Y +A K + + + ++ KG ++ +++ L G +E A + E+
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
R+GV + T N Q++E + P+I TYN LI + + M
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGV-YPDIVTYNTLISAYSSKGLM 286
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ E+ N + G + +Y +I+GLC+ K++ A + F EM+ GL P T+ +L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 1/204 (0%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ +R A + F +R +G + + + ++ R +L+ + G+ V T
Sbjct: 179 RKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTL 238
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+V LC G++E L ++ GV P TYN Y + A +L M
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P ++TYN +I + + +E++ + S L D +Y L+ C+K
Sbjct: 299 KGFS-PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV 357
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
E + F +M + ++P V F ++
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSM 381
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 77/166 (46%), Gaps = 18/166 (10%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVR-NGVS----------------PSAETYNCF 160
T + ++++ L GR+ DA+ L M+R +GVS + ++
Sbjct: 112 TSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLL 171
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
+ Y + A + + ++ V +I N LIG + + +++ ++ + S
Sbjct: 172 IRTYVQARKLREAHEAFTLLRSKGFTV-SIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+G+++ + ++++ LC+ K ++ + ++ EKG+ P VT+ TL
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 132/266 (49%), Gaps = 11/266 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y S+I CK +D A L M++ GV P+ +TYN +L+G C +S P E
Sbjct: 228 LPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC--SSGQPKE- 284
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +MR G+EPDV ++S+++ + + + + M ++G+ P +
Sbjct: 285 -------AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++++ + G + + LL MVRNG+ P ++ Y + + AM ++ +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKM 397
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L PN TY +IG+ R++ + + L Y LIHGLC K
Sbjct: 398 RQQGL-NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
W+ A + +EM+++G+ + F ++
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSI 482
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 143/287 (49%), Gaps = 14/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G+ K D A EM++RG+ P+VVTYN ++ +C+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK---------- 243
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A +V + M G+ PD +++ +LH Y + +P+ ++ L M+ G+ P V T
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ LC GR +A ++ M + G+ P TY + Y + L M
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+ + ++ILI + ++D +++ ++ L + +Y +I LC+ +
Sbjct: 364 RNGI-HPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
++A YF +MI++GL P + + +L GL + W R ++ + E
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN---KWERAEELILE 466
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 145/299 (48%), Gaps = 11/299 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +Y SLI+G C N+ + AE + EM++RG+ N + +N +++ C+
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK---------- 488
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +EK+F+ M G++P+V +++ +++ Y A K ++ L+ M G+ P T
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C R+EDA L EM +GVSP TYN + + A +LY ++
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + + TYNI++ D +++ ++ +L L+ ++ ++I L + +
Sbjct: 609 ESGTQI-ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
EA FV GL+P T+ + +I +L +L +++ T S N+
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 151/359 (42%), Gaps = 79/359 (22%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y S+++G+C + A FL +M GVEP+VVTY++L++ +C+ N R
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK------NGR 316
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTS---------------------------------- 86
A K+FD M RG++P++T+
Sbjct: 317 ----CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHY 372
Query: 87 -FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
FSI++ Y+ K ++ + M+++G+ P TY +V+ LC GR+EDA +M
Sbjct: 373 VFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV------------------ 187
+ G+SP YN A +L +M + +C+
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 188 ----------------PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
PN+ TYN LI + +MD ++ + + L + +Y+ L
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
I+G C+ + ++A F EM G+ P +T+ + +GL Q+ + L ++ E
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 135/295 (45%), Gaps = 14/295 (4%)
Query: 7 YTSLIYGWCKINRI-DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+T L+ G C R D + L M E G PNV +YN+LL G+C R ++ +
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLC------DENRSQEAL 178
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+ D+ R G PDV S++ V++ + + + + M ++GI P V TY S+
Sbjct: 179 ELLHMMADD-RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSI 237
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ LC ++ A E+L MV+NGV P TYN Y A+ ++M+ D +
Sbjct: 238 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGV 297
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
P++ TY++L+ R R+I++ + L ++ +Y L+ G K E
Sbjct: 298 -EPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356
Query: 246 QYFVEMIEKGLLPQKVTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFGS 295
M+ G+ P F L +G + ML + ++ L+ ++T+G+
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 28/282 (9%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V P++ TY +L+ CR L + + N K +G D +F+ +L
Sbjct: 83 VTPDLCTYGILIGCCCRAGRL---DLGFAALGNVIK-------KGFRVDAIAFTPLLKGL 132
Query: 95 SRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV--RNGVS 151
+ ++D L M E G P V +Y ++K LC R ++A ELL M R G S
Sbjct: 133 CADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGS 192
Query: 152 PS-----AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
P N FFKE D++ A Y +M + + +P++ TYN +I M
Sbjct: 193 PPDVVSYTTVINGFFKE----GDSDKAYSTYHEMLDRGI-LPDVVTYNSIIAALCKAQAM 247
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D E+ N + + + D +Y ++HG C + KEA + +M G+ P VT+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 267 YRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNYHFK 303
L ++ R++ K+ L E T+G+ Q Y K
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATK 349
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 7/216 (3%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
+A VFDE+ RG + + L +R P ++ + N M G + P + TY
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C C GR++ LG +++ G A + K K + AM + + +
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV---KGSELGLDLDSYTMLIHGLCEKQK 240
C+PN+ +YNIL+ NR E+ + + +G D+ SYT +I+G ++
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+A + EM+++G+LP VT+ ++ L ++ +
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 84/193 (43%), Gaps = 25/193 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPNER 60
PN Y++LI G+CKI+R++ A EM GV P+++TYN++L G+ + R + E
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Query: 61 F------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ K +A ++F + + ++ + +F+I++ +
Sbjct: 604 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 663
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D G+ P TY + + + G +E+ ++L M NG + +
Sbjct: 664 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGM 723
Query: 157 YNCFFKEYRGRKD 169
N +E R +
Sbjct: 724 LNFIVRELLQRGE 736
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 151/306 (49%), Gaps = 25/306 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ Y LI CK + + + L M E G+ P++++Y L+N + + +L
Sbjct: 147 PNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNL------ 200
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN-----FMKEKGIC 116
+A ++FDEM VRG+ PDV ++I++ + R + K N + E +
Sbjct: 201 ----LDAVELFDEMSVRGVNPDVMCYNILIDGFLR----KGDFVKANEIWKRLLTESSVY 252
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P+V TY ++ LC G+++++ E+ M +N SP T++ + N A K+
Sbjct: 253 PSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKV 312
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+++M E L P++ TYN ++ +++ E+WN V ++ SY MLI GL
Sbjct: 313 FQEMIESGLS-PDVRTYNAMLSGLFRTGKLNKCFELWN-VMSKNNCCNIVSYNMLIQGLL 370
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSE 296
+ +K ++A Y+ + E+GL T+ L GL ++ L R+ ++ + E G++
Sbjct: 371 DNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENE----GAD 426
Query: 297 FQNYHF 302
+ +
Sbjct: 427 LDTFAY 432
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 133/269 (49%), Gaps = 11/269 (4%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIE-RGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRN 67
S I + K + D A M++ G P + ++N +LN A + N+ R
Sbjct: 83 SAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLN-----AFIESNQW-----RE 132
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
AE F + G+ P++ +++I++ + + + + L +M E G+ P + +Y +++
Sbjct: 133 AELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLIN 192
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
L G + DA EL EM GV+P YN + + D A ++++++ +
Sbjct: 193 ALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVY 252
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
P++ TYNI+I L ++D E+WN +K +E DL +++ +IHGL + + A +
Sbjct: 253 PSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKV 312
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDML 276
F EMIE GL P T+ + GL ++ L
Sbjct: 313 FQEMIESGLSPDVRTYNAMLSGLFRTGKL 341
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 154/363 (42%), Gaps = 69/363 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++S+I+G K + AE+ EMIE G+ P+V TYN +L+G+ R L N+ F
Sbjct: 288 PDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKL--NKCF 345
Query: 62 E--------------------------KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E K + A + + RG++ D T++ ++++
Sbjct: 346 ELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLC 405
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ +L L + +G Y+S+V LC G +E A EL+ +M +N ++
Sbjct: 406 KNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSH 465
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG----------MFMALNR 205
+N Y A+ + R+MK D C P + +YN +I +++L
Sbjct: 466 VFNSLINGYVRAFKLEEAISVLREMKSKD-CAPTVVSYNTIINGLCKAERFSDAYLSLKE 524
Query: 206 M-------------------------DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
M DM +W+ L DL + ++IHGLC QK
Sbjct: 525 MLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQK 584
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRR-LKKKLDEESITFGS 295
A + F +M + +P VT T+ GL ++ + L+ W R L+ L + I++
Sbjct: 585 VDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNI 644
Query: 296 EFQ 298
F+
Sbjct: 645 TFK 647
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 135/266 (50%), Gaps = 13/266 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+S+++G CK ++ A + +M + + N +N L+NG R L
Sbjct: 432 YSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLE---------- 481
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A V EM+ + P V S++ +++ +A + + L M E+G+ P + TY+ ++
Sbjct: 482 EAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLI 541
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC +++ A L + + + P + +N + + A++++ QM++ + C
Sbjct: 542 DGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVN-C 600
Query: 187 VPNIHTYN-ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
VP++ T+N I+ G++ A + ++ ++ IW+ + + L D+ SY + GLC + +A
Sbjct: 601 VPDLVTHNTIMEGLYKAGDCVEALK-IWDRILEAGLQPDIISYNITFKGLCSCARVSDAI 659
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLI 271
++ + +++G+LP T+ L R ++
Sbjct: 660 EFLYDALDRGILPNAPTWNVLVRAVV 685
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 25/186 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P V Y ++I G CK R A L EM+E G++P+++TY++L++G+CR
Sbjct: 497 PTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNL 556
Query: 52 -----RASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
L P+ + I + A ++F +MR PD+ + + ++ +
Sbjct: 557 WHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYK 616
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A +L + + E G+ P + +Y K LCSC R+ DA E L + + G+ P+A T
Sbjct: 617 AGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPT 676
Query: 157 YNCFFK 162
+N +
Sbjct: 677 WNVLVR 682
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 84/205 (40%), Gaps = 6/205 (2%)
Query: 92 HVYSRAHKPQLSLDK---LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR- 147
H+ R P+L + ++ M+ + + S +K C + A L MV
Sbjct: 48 HILRRLMDPKLVVHVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDI 107
Query: 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
G +P ++N + A + + + PN+ TYNILI + + +
Sbjct: 108 FGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMS-PNLQTYNILIKISCKKRQFE 166
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ + + + L D+ SY LI+ L + +A + F EM +G+ P + + L
Sbjct: 167 KGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILI 226
Query: 268 RGLI-QSDMLRTWRRLKKKLDEESI 291
G + + D ++ K+ L E S+
Sbjct: 227 DGFLRKGDFVKANEIWKRLLTESSV 251
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV 49
P++ Y G C R+ A FL + ++RG+ PN T+NVL+ V
Sbjct: 637 PDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAV 684
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 143/323 (44%), Gaps = 44/323 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+LI CK ++ A +M G PNVVTYN L+ G+C
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG----- 240
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A + +M R IEP+V +F+ ++ + + K + + N M + + P V T
Sbjct: 241 -----DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT 295
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC G +++A ++ M RNG P+ Y + K MK++ +M
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355
Query: 182 EDDLCV----------------------------------PNIHTYNILIGMFMALNRMD 207
+ + P+I TYN+L+ +++
Sbjct: 356 QKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE 415
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
I+ +++ E+ +++ +YT++I G+C+ K ++A F + KG+ P +T+ T+
Sbjct: 416 KALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475
Query: 268 RGLIQSDMLRTWRRLKKKLDEES 290
G + ++ L KK+ E+
Sbjct: 476 SGFCRRGLIHEADSLFKKMKEDG 498
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 142/305 (46%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ +T L+ K+NR D+ +M G+ P + T N++++ VC S P
Sbjct: 80 LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVC--LSSQPCR- 136
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +M G EPD+ +F+ +L+ Y ++ + ++ + + G P V
Sbjct: 137 -------ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVV 189
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT++++CLC + A EL +M NG P+ TYN A L R M
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + PN+ T+ LI F+ + ++ +E++N + + D+ +Y LI+GLC
Sbjct: 250 MKRRI-EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGL 308
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK-LDEESITFGS 295
EA Q F M G P +V + TL G +S D ++ + + +K + +IT+
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 296 EFQNY 300
Q Y
Sbjct: 369 LIQGY 373
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 11/263 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+LI + K+ ++ A+ MI+ V P+V TY L+NG+C L
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD----- 310
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F M G P+ ++ ++H + ++ + + + M +KG+ T
Sbjct: 311 -----EARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ C GR + A+E+ +M P TYN A+ ++ M+
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ + NI TY I+I L +++ +++ + + ++ +YT +I G C +
Sbjct: 426 KREMDI-NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLI 484
Query: 242 KEACQYFVEMIEKGLLPQKVTFE 264
EA F +M E G LP + ++
Sbjct: 485 HEADSLFKKMKEDGFLPNESVYK 507
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 140/263 (53%), Gaps = 12/263 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ YT+L+ WC + A R EM+E+G++P+VV +N ++ G+ R +R
Sbjct: 329 PDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLR------GQRR 382
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + K+F+ M+ +G P+V ++++++ + + K ++++ M+E P VAT
Sbjct: 383 PEAV----KMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVAT 438
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + +++ +L EM + G P A TYN K R + A ++Y++M
Sbjct: 439 YTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMI 498
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L P IHTYN+++ F+ + M +W + + D++SYT+ I+ +
Sbjct: 499 KKGL-EPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINRHIRHGR 557
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
+EA +Y EMI KG+ ++ +
Sbjct: 558 PEEAYKYIEEMINKGMKAPQIDY 580
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 10/245 (4%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR---AHKPQLSLDKLNFMKEKGICPTVAT 121
I+NA VF+ MR G + V SF+ +L ++ + + DK++ P + +
Sbjct: 278 IKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQ----YSPDLRS 333
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQM 180
YT+++ C+ + +A + EM+ G+ P +N + RG++ A+K++ M
Sbjct: 334 YTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPE-AVKMFELM 392
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K PN+ TY +LI +MDM E + ++ ++ D+ +YT L+ G ++
Sbjct: 393 KAKGP-PPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQ 451
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
EM +KG P T+ L + L +M R+ KK+ ++ + N
Sbjct: 452 MDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNM 511
Query: 301 HFKPY 305
K Y
Sbjct: 512 MMKSY 516
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 110/245 (44%), Gaps = 12/245 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M + G + V ++N LL + + E R A +VFD+M + PD+ S++
Sbjct: 288 MRKNGFDDGVESFNCLLVALAK----------EGLGREARQVFDKMHGQ-YSPDLRSYTA 336
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ + A + N M EKG+ P V + ++++ L R +A ++ M G
Sbjct: 337 LMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKG 396
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P+ TY +++ + + AM+ + +M+E C P++ TY L+ + +MD V
Sbjct: 397 PPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAK-CQPDVATYTCLLVGYGNAKQMDRV 455
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + D +Y LI L + +A + + +MI+KGL P T+ + +
Sbjct: 456 TAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKS 515
Query: 270 LIQSD 274
D
Sbjct: 516 YFVGD 520
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT L+ G+ ++D L EM ++G P+ TYN L+ + R
Sbjct: 434 PDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNR--------- 484
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP-QLSLDKLNFMKEKGICPTVA 120
+A +++ +M +G+EP + ++++++ Y + M ++GICP V
Sbjct: 485 -NMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVN 543
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR--GRKD 169
+YT + GR E+A + + EM+ G+ YN F ++ G+ D
Sbjct: 544 SYTVFINRHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSKAGKPD 594
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 104/255 (40%), Gaps = 13/255 (5%)
Query: 20 IDMAERFLGEMIERGVEPNV-VTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
+D + +++ G + N+ + L +C L RF+ R + + F V
Sbjct: 162 VDRVCAAIADVVASGADANLEAALSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATVS 221
Query: 79 GIEPDVT-SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
G T ++ +LH+ + + + + + M + G ++ + +K + G I++
Sbjct: 222 GGFTHTTITYCKMLHILGKTRQFESMVAMIQEMGKAGAL-SMDAFKVAIKSFAAAGEIKN 280
Query: 138 AEELLGEMVRNGVSPSAETYNCFF----KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
A + M +NG E++NC KE GR+ K++ Q P++ +Y
Sbjct: 281 AVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYS------PDLRSY 334
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
L+ + + +WN + + D+ + +I GL Q+ EA + F M
Sbjct: 335 TALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKA 394
Query: 254 KGLLPQKVTFETLYR 268
KG P T+ L R
Sbjct: 395 KGPPPNVWTYTMLIR 409
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 155/345 (44%), Gaps = 61/345 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y++LI +CK+ D A++ L EM ERG N VTYNVL+ G+CR ++ F
Sbjct: 115 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 174
Query: 62 EKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+K + + A+ + DEM ++P+V ++ ++ + R
Sbjct: 175 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 234
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + M G+ P TY ++V+ LC G+++ A LL +MVR+ P T
Sbjct: 235 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 294
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI--------------------- 195
YN + + + A +L +M+ + PN++TY+I
Sbjct: 295 YNLIIEGHFRHHNKKDAFRLLSEMENAGIS-PNVYTYSIMIHGLCQSGEPEKASDLLEEM 353
Query: 196 --------------LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
LI + + + EI++ + + DL Y LI GL + +
Sbjct: 354 TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV 413
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+E+ +YF +M E+GLLP + T+ L G +++ L + +L +++
Sbjct: 414 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 458
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 136/299 (45%), Gaps = 16/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+ +I+G C+ + A L EM +G++PN Y L++G CR
Sbjct: 325 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR---------- 374
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A ++FD+M + PD+ ++ ++ S+ + + S M+E+G+ P T
Sbjct: 375 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 434
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ G +E AE+L+ M+ G+ P+ Y + Y D ++ M
Sbjct: 435 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 494
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + N Y ILI + M+ + + ++ + D+ Y+ LI GLC+
Sbjct: 495 DQGVMLDN-RIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADR 553
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGS 295
++A EM +KG+ P V + L GL +S + R L K L +T+ S
Sbjct: 554 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 612
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 143/362 (39%), Gaps = 64/362 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y SLI+G K+ R++ + ++ +M ERG+ PN TY+ L++G + L E+
Sbjct: 394 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ 453
Query: 61 F-------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
I F M +G+ D + I++H S
Sbjct: 454 LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLS 513
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + L+ +++ G P V Y+S++ LC E A +L EM + GV P+
Sbjct: 514 SSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIV 573
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
YN D + A ++ + L VPN TY LI + + ++N
Sbjct: 574 CYNALIDGLCKSGDISYARNVFNSILAKGL-VPNCVTYTSLIDGSCKVGDISNAFYLYNE 632
Query: 216 VKGSELGLD----------------------------------LDSYTMLIHGLCEKQKW 241
+ + + D + S+ L+ G C++ K
Sbjct: 633 MLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKM 692
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
+E + ++ +GL+P +T E + GL ++ L + +L +++ SE H
Sbjct: 693 QETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKT----SESAARH 748
Query: 302 FK 303
F
Sbjct: 749 FS 750
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 138/312 (44%), Gaps = 26/312 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-----RASLH 56
PNV +Y +LI G+ + D A + + EM+ GV+PN +TY+ L+ G+C+ RASL
Sbjct: 220 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 279
Query: 57 PNERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ + R +A ++ EM GI P+V ++SI++H +
Sbjct: 280 LKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 339
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +P+ + D L M KG+ P Y ++ C G + A E+ +M + V P
Sbjct: 340 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 399
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + K + QM+E L +PN TY+ LI ++ ++ ++ +
Sbjct: 400 YNSLIFGLSKVGRVEESTKYFAQMQERGL-LPNEFTYSGLIHGYLKNGDLESAEQLVQRM 458
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ L + Y L+ + ++ F M+++G++ + L L S +
Sbjct: 459 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 518
Query: 277 RTWRRLKKKLDE 288
R+ ++++
Sbjct: 519 EAAFRVLSEIEK 530
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +I G + + A R L EM G+ PNV TY+++++G+C+ S P +
Sbjct: 290 PDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ--SGEPEK-- 345
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +EM +G++P+ ++ ++ Y R L+ + + M + + P +
Sbjct: 346 ------ASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 399
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ L GR+E++ + +M G+ P+ TY+ Y D A +L ++M
Sbjct: 400 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 459
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L PN Y L+ + + ++ V + + + LD Y +LIH L
Sbjct: 460 DTGL-KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 518
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ A + E+ + G +P + +L GL ++
Sbjct: 519 EAAFRVLSEIEKNGSVPDVHVYSSLISGLCKT 550
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 12/272 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
M + ++Y LI+ ++ A R L E+ + G P+V Y+ L++G+C+ A
Sbjct: 499 MLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADR----- 553
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + DEM +G++P++ ++ ++ ++ + + N + KG+ P
Sbjct: 554 -----EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCV 608
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS++ C G I +A L EM+ G++P A Y+ D AM L +M
Sbjct: 609 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 668
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+I ++N L+ F +M ++ + + G L + + +I GL E K
Sbjct: 669 FLRGHA--SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGK 726
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
E FVE+ +K F +L+ +I
Sbjct: 727 LSEVHTIFVELQQKTSESAARHFSSLFMDMIN 758
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 1/226 (0%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+++A +V MR RG+ P + + +L RA L FM GI P V TY++
Sbjct: 63 VQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYST 122
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
+++ C + A+++L EM G + TYN A + M ED
Sbjct: 123 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM-EDY 181
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
VP+ TY LI R + + + + + +EL ++ Y LI G + EA
Sbjct: 182 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 241
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ EM+ G+ P K+T++ L RGL + + L K++ +S
Sbjct: 242 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 287
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 127/321 (39%), Gaps = 66/321 (20%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +Y+SLI G CK + A L EM ++GV+PN+V YN L++G+C+
Sbjct: 534 VPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD------ 587
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A VF+ + +G+ P+ +++ ++ + + N M GI P
Sbjct: 588 ----ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 643
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y+ + S G +E A L+ EM G S ++N + R +KL +
Sbjct: 644 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVI 702
Query: 181 KEDDLCVPNIHTY-NILIGM------------FMALNR--------------MDMVRE-- 211
L VPN T NI+ G+ F+ L + MDM+ +
Sbjct: 703 MGRGL-VPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 761
Query: 212 ---------IWNHVKGSELGLDL---------------DSYTMLIHGLCEKQKWKEACQY 247
I +H K L L SY ++ LC K K EA
Sbjct: 762 IPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNL 821
Query: 248 FVEMIEKG-LLPQKVTFETLY 267
EM ++G L P V ++
Sbjct: 822 LKEMDKRGNLQPTLVALLGIF 842
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 11/283 (3%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
L+ + K R+ A + M +RG+ P++ N LL + R ++
Sbjct: 53 LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMAL----------LW 102
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
KV + M GI PDV ++S ++ Y + + + L M+E+G TY ++ L
Sbjct: 103 KVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGL 162
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C G +E+A +M G+ P TY + +N A L +M +L PN
Sbjct: 163 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAEL-KPN 221
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+ Y LI FM D ++ + + + + +Y L+ GLC+ + A
Sbjct: 222 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLK 281
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+M+ P +T+ + G + + RL +++ I+
Sbjct: 282 QMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGIS 324
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 137/292 (46%), Gaps = 15/292 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V +Y+SLI +C I+ EM+ R V PNVVTY+ L+ G+ R
Sbjct: 219 DVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRW------- 271
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
R A ++ +M RG+ PDV +++++ + + ++ L+ M +KG P TY
Sbjct: 272 ---REASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTY 328
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
VV LC R++DA ++ MV+ G P A TYN K G + AM L++ +
Sbjct: 329 NVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLS 388
Query: 183 DDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQ 239
+ V P++ T N LI R+ I H E+GL ++ +Y LI G +
Sbjct: 389 EKFHVKPDVFTCNNLIQGLCKEGRVHDAARI--HSSMVEMGLQGNIVTYNFLIEGYLAAR 446
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K EA + + +E G P +T+ + GL + ML R L K+ + I
Sbjct: 447 KLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGI 498
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 139/307 (45%), Gaps = 27/307 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIER--GVEPNVVTYNVLLNGVCRRASLHPNER 60
NV ++ G+C+ + D A +M V P+ VTYN L+NG C+
Sbjct: 111 NVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCK--------- 161
Query: 61 FEKTIRNAEKVFDEMRVRG-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
K + A +F+ M+ G P++ ++S+++ Y ++ + L L M+ +G+ V
Sbjct: 162 -AKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADV 220
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y+S++ C G IE EL EM+R VSP+ TY+C + A ++ +
Sbjct: 221 FVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKD 280
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCE 237
M + P++ Y +L R ++ + + KG E G +Y ++++GLC+
Sbjct: 281 MTARGV-RPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPG--TLTYNVVVNGLCK 337
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
+ + +A M++KG P VT+ TL +GL + + L K L E
Sbjct: 338 EDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSE-------- 389
Query: 298 QNYHFKP 304
+H KP
Sbjct: 390 -KFHVKP 395
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 132/295 (44%), Gaps = 28/295 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
P Y ++ G CK +R+D A + M+++G +P+ VTYN LL G+C +H
Sbjct: 323 PGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDL 382
Query: 58 -----NERF------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
+E+F E + +A ++ M G++ ++ +++ ++ Y
Sbjct: 383 WKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGY 442
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
A K +L + E G P TY+ ++ LC + A L +M +G+ P+
Sbjct: 443 LAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTV 502
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
YN A L+++M+ + V ++ ++NI+I + + +E+ +
Sbjct: 503 IDYNALMTSLCREDSLEQARSLFQEMRNVNHNV-DVVSFNIIIDGTLKAGDVKSAKELLS 561
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ +L D ++++LI+ + EA + +M+ G +P V F++L +G
Sbjct: 562 EMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKG 616
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 118/276 (42%), Gaps = 12/276 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-E 59
+P ++L + + A L M +RG NV N++L G CR
Sbjct: 74 LPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMS 133
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PT 118
F + RN + V PD +++ +++ + +A + + MK+ G C P
Sbjct: 134 LFSQMKRNYDCVV---------PDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPN 184
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ TY+ ++ C C G + + LL EM R G+ Y+ + G D +L+
Sbjct: 185 LVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFD 244
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M + PN+ TY+ L+ R E+ + + D+ +YT+L GLC+
Sbjct: 245 EMLRRKVS-PNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKN 303
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ +A + M++KG P +T+ + GL + D
Sbjct: 304 GRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKED 339
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+ +I G CK+ + +A +M + G+ P V+ YN L+ +CR
Sbjct: 465 PNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCR---------- 514
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ A +F EMR DV SF+I++ +A + + + L+ M + P T
Sbjct: 515 EDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVT 574
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ ++ G +++A L +MV G P ++ K Y + + + L QM
Sbjct: 575 FSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMA 634
Query: 182 EDDLCVPNIHTYNIL 196
+ D+ + + T IL
Sbjct: 635 DKDVVLDSKLTSTIL 649
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 93/253 (36%), Gaps = 42/253 (16%)
Query: 53 ASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
++L N R + V+ +M + P TS S + + H P + L+ M +
Sbjct: 46 STLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTK 105
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
+G V V+K C G+ + A
Sbjct: 106 RGFGVNVYNLNLVLKGFCRSGQCDKA---------------------------------- 131
Query: 173 AMKLYRQMKED-DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV-KGSELGLDLDSYTM 230
M L+ QMK + D VP+ TYN L+ F R+ R ++ + KG + +L +Y++
Sbjct: 132 -MSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSV 190
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKK 285
LI C+ + E EM +GL + +L + T R L++K
Sbjct: 191 LIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRK 250
Query: 286 LDEESITFGSEFQ 298
+ +T+ Q
Sbjct: 251 VSPNVVTYSCLMQ 263
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 131/273 (47%), Gaps = 11/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + LI G K+ I+ A L ++ + GV PN+ YN ++N +C+ L
Sbjct: 327 VPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKL----- 381
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
AE +F M RG+ P+ +++I++ + R K ++ N M E GI TV
Sbjct: 382 -----EEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVY 436
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y S++ C C G+++ AE L EMV G+ P+ TY Y A KLY +M
Sbjct: 437 SYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEM 496
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ PN T+ LI +N+M ++++ + ++ + +Y +LI G C +
Sbjct: 497 TGKGI-APNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGN 555
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
A + EMI+KGL P T+ L GL +
Sbjct: 556 TTRAFELLDEMIKKGLSPDTYTYRPLIAGLCST 588
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 139/286 (48%), Gaps = 14/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V YTSLI G+CK + A + EM +G+ PN VT+ L+ G+C+
Sbjct: 468 PTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQI--------- 518
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+FDEM I P+ ++++++ + R + + L+ M +KG+ P T
Sbjct: 519 -NKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYT 577
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LCS GR+ +A+E + ++ Y + + A+ ++M
Sbjct: 578 YRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMV 637
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMD-MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L + ++ +Y +LI ALN+ D ++ E+ + G + D YT+LI G +
Sbjct: 638 GRGLQM-DLVSYAVLIS--GALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGN 694
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
K+A +++ MI +G +P VT+ L GL ++ + + L K++
Sbjct: 695 LKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRM 740
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 11/289 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++ Y I G CK R+ A + E+G++ ++VTY L+ G+CR + FE
Sbjct: 259 SIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRI------QEFE 312
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ ++ DEM G P + S ++ + + + + LN + + G+ P + Y
Sbjct: 313 VGM----EMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVY 368
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S++ LC G++E+AE L M G++P+ TY + R + A + +M E
Sbjct: 369 NSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIE 428
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ +++YN +I +M M ++ + L + +YT LI G C+
Sbjct: 429 CGIS-ATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVP 487
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+A + + EM KG+ P VTF L GL Q + + +L ++ E I
Sbjct: 488 KAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKI 536
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 128/262 (48%), Gaps = 17/262 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER--FEKT 64
YT+L+ G+CK RI A EM+ RG++ ++V+Y VL++G +L+ N+R FE
Sbjct: 613 YTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG-----ALNQNDRILFE-- 665
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ EM +G++PD ++I++ + ++ + + + M +G P TYT+
Sbjct: 666 ------LLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTA 719
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
+V L G + +A+ L M+ P+ TY CF + A++L+ M +
Sbjct: 720 LVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGS 779
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
N TYNILI + + + ++ + + G + D +Y+ I+ C++ A
Sbjct: 780 F--ANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAA 837
Query: 245 CQYFVEMIEKGLLPQKVTFETL 266
+ M+++GL P +V F L
Sbjct: 838 MDMWECMLQRGLKPDRVVFNFL 859
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+PN Y LI G C+ A L EMI++G+ P+ TY L+ G+C +
Sbjct: 537 LPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKE 596
Query: 56 ------HPNERF--------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
H ++R E I+ A EM RG++ D+ S+++++ +
Sbjct: 597 FINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLIS-GA 655
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
++ + L M KG+ P YT ++ G ++ A E M+ G P++
Sbjct: 656 LNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSV 715
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY N A L+++M + +PN TY + M+ ++ N
Sbjct: 716 TYTALVNGLFKAGYVNEAKLLFKRMLVGE-AIPNHITYGCFLDHLTKEGNMENALQLHNA 774
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY-----RGL 270
+ + +Y +LI G C+ K++EA + MI G++P +T+ T RG
Sbjct: 775 MLQGSFA-NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGN 833
Query: 271 IQSDMLRTWRRLKKKLDEESITF 293
+ + M L++ L + + F
Sbjct: 834 VDAAMDMWECMLQRGLKPDRVVF 856
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 100/242 (41%), Gaps = 34/242 (14%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + + V + MR G+ P+V + S +L+ +R K + L+ + + G+ P Y
Sbjct: 169 KRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIY 228
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T VVKCLC A+E++ + NG S S TYN F K A+++ R + E
Sbjct: 229 TVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGE 288
Query: 183 DDL-------C---------------------------VPNIHTYNILIGMFMALNRMDM 208
L C VP+ + LI + + ++
Sbjct: 289 KGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEG 348
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
E+ N V + +L Y +I+ LC+ K +EA F M E+GL P VT+ L
Sbjct: 349 AFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILID 408
Query: 269 GL 270
G
Sbjct: 409 GF 410
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
N Y LI G+C+I + A + L MI G+ P+ +TY+ + C+R ++
Sbjct: 781 ANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDA---- 836
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +++ M RG++PD F+ ++H + +L N M +G+ PT +T
Sbjct: 837 ------AMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQST 890
Query: 122 YTSVVKCLCSCGRIEDAE 139
Y S++ L R+ +
Sbjct: 891 YHSLMVQLAQRARLTQVQ 908
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y++ IY +CK +D A M++RG++P+ V +N L++ C L
Sbjct: 815 VPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELD---- 870
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSF-SIVLHVYSRAHKPQL 102
A ++ ++M +RG++P +++ S+++ + RA Q+
Sbjct: 871 ------RALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 134/281 (47%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT++I G CK +D A+ MI++GV PN TY L++G
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKW------ 253
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ ++ EM G++PD ++++L + + + + + + KGI P V
Sbjct: 254 ----KEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTI 309
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ + G + + L MV NGVSP +N F Y + + AM ++ +M+
Sbjct: 310 YGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMR 369
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L PNI TY LI L R+D +N + + D+ ++ L++GLC KW
Sbjct: 370 QQRLS-PNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKW 428
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++A + F E++++G+ V F TL L + + +RL
Sbjct: 429 EKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRL 469
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 133/271 (49%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +LI CK+ R+D A +MI+ G+ P++ ++ L+ G+C +++
Sbjct: 375 PNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLC------TVDKW 428
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK AE++F E+ +GI D F+ ++ R + + ++ M G+ P V +
Sbjct: 429 EK----AEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVIS 484
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V C GRI++A +LL +V G+ P TYN Y + + A L+R+M
Sbjct: 485 YNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREML 544
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P++ TYN ++ R +E++ + S +++ +Y ++I+GLC+
Sbjct: 545 MKGL-TPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFV 603
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA + F + K L T + L++
Sbjct: 604 DEAFKMFHSLCSKDLQLDIFTANIMIGALLK 634
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 141/298 (47%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +++SL+YG C +++ + AE E++++G+ + V +N L+ +CR
Sbjct: 410 PDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCR---------- 459
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A+++ D M G+ PDV S++ ++ + + + L+ + G+ P T
Sbjct: 460 EGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVT 519
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C RI+DA L EM+ G++P TYN + A +LY M
Sbjct: 520 YNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI 579
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ NI+TYNI+I N +D ++++ + +L LD+ + ++I L + +
Sbjct: 580 NSRTQM-NIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRK 638
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
++A F + GL+P T+ + LI+ L L ++E S N
Sbjct: 639 EDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLN 696
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 131/297 (44%), Gaps = 26/297 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +Y L+ CK R A +I +G++PNV Y +LL+G SL F
Sbjct: 270 PDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSF 329
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ I A +FD+MR + + P++ ++ ++ +
Sbjct: 330 LDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCK 389
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ ++ K N M ++G+ P + ++S+V LC+ + E AEEL E++ G+
Sbjct: 390 LGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVF 449
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N A +L M + P++ +YN L+ R+D ++ + +
Sbjct: 450 FNTLMCNLCREGRVMEAQRLIDLMLRVGV-RPDVISYNTLVDGHCLTGRIDEAAKLLDVI 508
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
L D +Y L+HG C+ ++ +A F EM+ KGL P VT+ T+ GL Q+
Sbjct: 509 VSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQT 565
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 134/301 (44%), Gaps = 14/301 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGV---EPNVVTYNVLLNGVCRRASLHPN 58
P+V Y+ L+ G+C R + A L M + G PNVVTY +++G+C+
Sbjct: 162 PDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCK------- 214
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ + A+ VF M +G+ P+ +++ ++H Y K + + L M G+ P
Sbjct: 215 ---AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
Y ++ LC GR +A + ++R G+ P+ Y Y + + M +
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGY-ATEGSLSEMHSFL 330
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ + P+ H +NI+ + +D I++ ++ L ++ +Y LI LC+
Sbjct: 331 DLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKL 390
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
+ +A F +MI++G+ P F +L GL D L ++ ++ I + F
Sbjct: 391 GRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFF 450
Query: 299 N 299
N
Sbjct: 451 N 451
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 26/224 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
P+ Y +L++G+CK RID A EM+ +G+ P+VVTYN +L+G+ +
Sbjct: 515 PDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL 574
Query: 58 -----NERFEKTIRN----------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
N R + I A K+F + + ++ D+ + +I++ +
Sbjct: 575 YLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLK 634
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + ++D + G+ P V TY + + L G +E+ +EL M NG +P++
Sbjct: 635 GGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRM 694
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
N + R D N A ++ E + + T ++LI ++
Sbjct: 695 LNALVRWLLHRGDINRAGAYLSKLDEKNFSL-EASTTSMLISIY 737
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 19/239 (7%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA---HKPQLSLDKLNFMKEK---GICPT 118
+ +A K+FDEM V +F+ +L SRA +L + N M + + P+
Sbjct: 32 LNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPS 91
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN----GAM 174
TYT ++ C C GR++ G +++ G + F + +G DA
Sbjct: 92 SFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVI--FSQLLKGLCDAKRVDEATD 149
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL---DLDSYTML 231
L R+M E C P++ +Y+IL+ F R + E+ + + G ++ +YT +
Sbjct: 150 ILLRRMPEFG-CTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTV 208
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
I GLC+ Q A F MI+KG+ P T+ L G + + W+ + + L E S
Sbjct: 209 IDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLS---IGKWKEVVQMLQEMS 264
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 16/240 (6%)
Query: 35 VEPNVVTYNVLLNGVCRRASL-HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
V P+ TY +L+ CR L H F ++ +V D FS +L
Sbjct: 88 VAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRV----------NDTVIFSQLLKG 137
Query: 94 YSRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV-- 150
A + + D L M E G P V +Y+ ++K C+ R E+A ELL M +G
Sbjct: 138 LCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGS 197
Query: 151 -SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
+P+ TY + + A +++ M D PN HTY LI ++++ + V
Sbjct: 198 HTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMI-DKGVRPNNHTYTCLIHGYLSIGKWKEV 256
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ + L D Y +L+ LC+ + EA F +I KG+ P + L G
Sbjct: 257 VQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHG 316
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 137/305 (44%), Gaps = 46/305 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YTSLI G CK +D+A M++ G +PN VTY+ L+NG+C
Sbjct: 235 PDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCS---------- 284
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A + +EM +GIEP V +++I + A + ++ L MK++G P V T
Sbjct: 285 EGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQT 344
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ L G+ E A + +M+ +G+ P+A TY+ + A+ ++ M
Sbjct: 345 YTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWML 404
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH-------------------------- 215
D +PN TYN++I F ++ + I++
Sbjct: 405 SHD-SLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYM 463
Query: 216 ---------VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+KG+ L LD +Y LI G K + A F EM+E G+ P VT+ +
Sbjct: 464 NNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAI 523
Query: 267 YRGLI 271
G +
Sbjct: 524 INGYL 528
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 137/306 (44%), Gaps = 26/306 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV------------ 49
PNV+ YT+LI G + + ++A +M+ G+ P VTY+ L+N +
Sbjct: 340 PNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTI 399
Query: 50 ----CRRASLHPNERFEKTIRN---------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
SL E + I+ A +FD+M G P+V +++I++H+Y +
Sbjct: 400 FEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFK 459
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ L MK G+ TY +++ G++E A L EMV +G+SP+ T
Sbjct: 460 QGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVT 519
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN Y + A+ L+ +M E VP+ TYN++I F NR+ +
Sbjct: 520 YNAIINGYLTVAKVDDALALFWKMVESG-NVPSSGTYNMMISGFSKTNRISEAENFCGKM 578
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
L ++ +YT I GLC+ + A + F EM ++ P T+ +L GL Q
Sbjct: 579 VKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQA 638
Query: 277 RTWRRL 282
RL
Sbjct: 639 EDAERL 644
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 34/296 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN + Y +I G+C I I A +M++ G PNV+TYN++++ ++ ++ R
Sbjct: 409 LPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMR 468
Query: 61 FEKTIR-------------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ ++ +A +F+EM GI P+V +++ +++ Y
Sbjct: 469 LLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYL 528
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
K +L M E G P+ TY ++ RI +AE G+MV+ G+ P+
Sbjct: 529 TVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVI 588
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY F + A K++ +MK+ D PN+ TY+ LI + + + +
Sbjct: 589 TYTSFIDGLCKNGRTSLAFKIFHEMKKRDY-FPNLCTYSSLIDGLCQEGQAEDAERLLD- 646
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
G E ++D+YT L+ GLC K + EA Q M +KGL P E +YR L+
Sbjct: 647 -DGCEP--NVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPS----EEIYRALL 695
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + ++I C ++ AE +G + G P+ TY L+ G C+ +L
Sbjct: 200 PNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDL---- 255
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++FD M G +P+ ++S +++ + + ++D L M +KGI PTV
Sbjct: 256 ------AFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHA 309
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT + LC GR +A +LLG+M + G P+ +TY A+ +Y +M
Sbjct: 310 YTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKML 369
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D L VP TY+ LI R + I+ + + + ++Y ++I G C
Sbjct: 370 ADGL-VPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYI 428
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++A F +M++ G P +T+ + + + RL
Sbjct: 429 QKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRL 469
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 19/237 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--RASLHPN 58
+P+ Y +I G+ K NRI AE F G+M+++G+ PNV+TY ++G+C+ R SL
Sbjct: 549 VPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSL--- 605
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
A K+F EM+ R P++ ++S ++ + + + + + G P
Sbjct: 606 ---------AFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAE----DAERLLDDGCEPN 652
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V TYT++V+ LC GR +A++L+ M + G+ PS E Y + A+K++
Sbjct: 653 VDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFD 712
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
M P + Y LI N + ++ + D +T+L+ GL
Sbjct: 713 SMVTTGF-QPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGL 768
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 32/292 (10%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---------- 56
Y +LI G+ + +++ A EM+E G+ PNVVTYN ++NG A +
Sbjct: 485 YANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMV 544
Query: 57 -----PNER--------FEKT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
P+ F KT I AE +M +G+ P+V +++ + + +
Sbjct: 545 ESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTS 604
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
L+ + MK++ P + TY+S++ LC G+ EDAE LL + G P+ +TY
Sbjct: 605 LAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLV 660
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN-ILIGMFMALNRMDMVREIWNHVKGSE 220
+ G+ A +L MK+ L P+ Y +L+G L ++ +I++ + +
Sbjct: 661 RGLCGKGRCYEADQLVESMKKKGL-QPSEEIYRALLVGQCKNL-EVESALKIFDSMVTTG 718
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
L Y LI LC+ ++A F M++K +V + L GL++
Sbjct: 719 FQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLK 770
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 1/200 (0%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
V+ EM GI P++ +F+ ++ + K Q + + + G CP TYTS++ C
Sbjct: 189 VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHC 248
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
G ++ A E+ MV++G P++ TY+ AM + +M + + P +
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGI-EPTV 307
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
H Y I I R ++ +K G ++ +YT LI GL K++ A + +
Sbjct: 308 HAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHK 367
Query: 251 MIEKGLLPQKVTFETLYRGL 270
M+ GL+P VT+ L L
Sbjct: 368 MLADGLVPTAVTYSALINQL 387
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 9/189 (4%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
SFS +L + L D M GI P + T+ +++K LC+ G++++AE ++G +
Sbjct: 169 SFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHI 228
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
G P TY + + + A +++ +M +D C PN TY+ LI + R
Sbjct: 229 FHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDG-CDPNSVTYSALINGLCSEGR 287
Query: 206 ----MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
MDM+ E+ + KG E + +YT+ I LC+ + EA + +M ++G P
Sbjct: 288 LEEAMDMLEEMID--KGIE--PTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQ 343
Query: 262 TFETLYRGL 270
T+ L GL
Sbjct: 344 TYTALISGL 352
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 29/169 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
PN+ Y+SLI G C+ + + AER L + G EPNV TY L+ G+C
Sbjct: 620 PNLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTTLVRGLCGKGRCYEADQL 675
Query: 51 ----RRASLHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
++ L P+E + + +A K+FD M G +P ++ + ++ +
Sbjct: 676 VESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCK 735
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
A+ Q + M +K +T ++ L G + + ELL M
Sbjct: 736 ANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVM 784
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
PN+ T+N +I + ++ I H+ D +YT LI G C+ A +
Sbjct: 200 PNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEM 259
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD--EESITFGSE 296
F M++ G P VT+ L GL RL++ +D EE I G E
Sbjct: 260 FDRMVKDGCDPNSVTYSALINGLCSEG------RLEEAMDMLEEMIDKGIE 304
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 140/290 (48%), Gaps = 14/290 (4%)
Query: 2 PNVKMYTSLIYGWCK---INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
P+V Y ++I G+CK R+ + L EM+E G+ PN VT+NVL+NG C+
Sbjct: 218 PSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCK------- 270
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ A +VF+EM+ +GI V ++S ++ K + + ++ MK+ G+ P
Sbjct: 271 ---DSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+AT SV+ C G + DAE + M + V P+ TY YR A+ +
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKE 387
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M + PN YN LI F V + + ++ + D+ +Y +LI LC K
Sbjct: 388 AMSGKGV-RPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVK 446
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ ++A + EM+ GL P +T+ T+ G + +++ ++ ++++
Sbjct: 447 GEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEK 496
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 11/270 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y++L++G C +++ + + EM + G+ PN+ T N +LNG C++
Sbjct: 292 SVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKG--------- 342
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ +AE D M + ++P+V +++I++ Y R K + +L M KG+ P Y
Sbjct: 343 -MMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIY 401
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ G LL EM GV TYN + + A+KL +M
Sbjct: 402 NCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLM 461
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L P TYN +I + + EI ++ + ++ +Y + I LC K +
Sbjct: 462 VGL-EPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKME 520
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
E + EM+EKGL+P VT++T+ G+++
Sbjct: 521 ETNELLNEMLEKGLVPNGVTYDTIKEGMME 550
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 137/316 (43%), Gaps = 34/316 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ L+ R+D+AER + R V P++ T+N++++G+C+ L
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207
Query: 62 EKTIR----------------------------NAEKVFDEMRVRGIEPDVTSFSIVLHV 93
K IR + + + EM GI P+ +F+++++
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Y + ++ MK++GI +V TY+++V LCS G++E+ +L+ EM G+ P+
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
T N + + A M++ ++ PN+ TY IL+ + L++M +
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNV-KPNVVTYTILVDGYRRLDKMKDALAVK 386
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL-IQ 272
+ G + + Y LI G W+ EM KG+ VT+ L L ++
Sbjct: 387 EAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVK 446
Query: 273 SDMLRTWRRLKKKLDE 288
++ R+ K LDE
Sbjct: 447 GEV----RKAVKLLDE 458
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 116/243 (47%), Gaps = 4/243 (1%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
AE+ F R + PD+ +F+IV+ + + + + D ++ G+ P+V TY +++
Sbjct: 169 AERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIID 228
Query: 128 CLCS---CGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
C GR+ + LL EMV G+SP+ T+N Y + A++++ +MK+
Sbjct: 229 GYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQG 288
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
+ ++ TY+ L+ + +++ ++ + +K L +L + +++G C+K +A
Sbjct: 289 IAA-SVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDA 347
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
+ M +K + P VT+ L G + D ++ +K+ + + + + N
Sbjct: 348 EGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAG 407
Query: 305 YRR 307
+ R
Sbjct: 408 FTR 410
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 45/171 (26%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN ++Y LI G+ + L EM +GV ++VTYNVL+ +C +
Sbjct: 396 PNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGE------- 448
Query: 62 EKTIRNAEKVFDEMRVRGIEP-----------------------------------DVTS 86
+R A K+ DEM + G+EP +V +
Sbjct: 449 ---VRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVT 505
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
+++ + R K + + + LN M EKG+ P TY ++ + + G D
Sbjct: 506 YNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPD 556
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 129/257 (50%), Gaps = 11/257 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
M +V +Y +I G+ +++ I A + +MIERG+ P+VVT+N L+NG CRR L
Sbjct: 513 MEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDL----- 567
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+ + +R++G+ P V +++ +++ Y Q L+ M+ + PT
Sbjct: 568 -----MEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHV 622
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++K LC ++ ++ +LL M G+ P + TYN + + K+ A++LY M
Sbjct: 623 TYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMM 682
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P TY +LI + V + ++ + L +Y +I C K +
Sbjct: 683 LLHN-CDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQ 741
Query: 241 WKEACQYFVEMIEKGLL 257
+A YF +M+ KG +
Sbjct: 742 VSKALGYFNQMLAKGFV 758
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 46/302 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YT+LI G C++ I+ A + E + RG + NV+ YN+LL+ +C+
Sbjct: 374 PDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGR------- 426
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH------VYSRAHK--PQLSLDK------- 106
I A +FDEM +EPD +SI++H RA++ Q+ L +
Sbjct: 427 ---IEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFA 483
Query: 107 -----LNFMKEKGICPT---------------VATYTSVVKCLCSCGRIEDAEELLGEMV 146
L K I V Y ++ I +A +L +M+
Sbjct: 484 QRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMI 543
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G++PS T+N + R D A K+ ++ L VP++ TY L+ + + M
Sbjct: 544 ERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGL-VPSVVTYTTLMNAYCEVGNM 602
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + ++ + + +YT+LI GLC + K E+ Q M KGLLP VT+ T+
Sbjct: 603 QEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTI 662
Query: 267 YR 268
+
Sbjct: 663 IQ 664
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 121/276 (43%), Gaps = 11/276 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y L++G C +D A F +M + GVEP+VVTYN L G +
Sbjct: 309 YNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLG----------LMS 358
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A KV +M ++G+ PD+ +++ ++ + + + +L +G V Y ++
Sbjct: 359 GARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLL 418
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
CLC GRIE+A L EM + P Y+ A +LY QM+
Sbjct: 419 SCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKF 478
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+ +L+G+F N + R ++ +L D+ Y ++I G EA Q
Sbjct: 479 PHHFAQRAVLLGLFKNGN-ISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQ 537
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ +MIE+G+ P VTF TL G + L R++
Sbjct: 538 LYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKM 573
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 131/289 (45%), Gaps = 20/289 (6%)
Query: 2 PNVKMYTS-LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P + TS LI+G C+ ++++ A FL + + V P++V+ N +++ C+
Sbjct: 234 PQSECTTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVG------- 285
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A F M G+ D S++I+LH A +L + M++ G+ P V
Sbjct: 286 ---LIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVV 342
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ K G + A +++ +M+ G++P TY + + A+KL RQ
Sbjct: 343 TYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKL-RQE 401
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
N+ YN+L+ + R++ +++ ++ L D Y++LIHGLC++
Sbjct: 402 TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGF 461
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-------DMLRTWRRL 282
+ A Q + +M K P + GL ++ + TW R+
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRM 510
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 25/180 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------ 54
+P YT LI G C+ N++ + + L M +G+ P+ VTYN ++ C+
Sbjct: 618 VPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQ 677
Query: 55 ------LH---PNERFEKTIRNAEKVF------DEMRVRGIEPDVTSFSIVLHVYSRAH- 98
LH P + K + NA +F D M V + ++T + +AH
Sbjct: 678 LYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHC 737
Query: 99 -KPQLS--LDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
K Q+S L N M KG ++ Y++V+ LC G I +A+ M+ GV+P E
Sbjct: 738 AKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPE 797
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 90/222 (40%), Gaps = 40/222 (18%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
I +A V +M+ + V +++ +LH + D N +K G + T +
Sbjct: 186 IHDALFVIAKMKDLNFQASVPTYNSLLH---NMRHTDIMWDVYNEIKVSGAPQSECTTSI 242
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ LC ++EDA L D+N +
Sbjct: 243 LIHGLCEQSKLEDAISFL-------------------------HDSNKVVG--------- 268
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
P+I + N ++ F + +D+ R + + + L D SY +L+HGLC EA
Sbjct: 269 ---PSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEA 325
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ +M + G+ P VT+ TL +G + ++ R++ +K+
Sbjct: 326 LGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 147/323 (45%), Gaps = 26/323 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PNV MY +LI + + +R +MA L MI GV P++ YN L+ G+CR
Sbjct: 484 PNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKML 543
Query: 52 -----RASLHPNER--------FEKT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ PN + K+ I+ AE+ F +M GI P+ ++I++ +
Sbjct: 544 LVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCD 603
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L M EKG+ P + Y++++ L G+ ++A + + ++ GV P
Sbjct: 604 VGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFL 663
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + D A +LY +M + + PNI YN LI L + RE+++ +
Sbjct: 664 YNSLISGFCKEGDIEKASQLYDEMLHNGIN-PNIVVYNTLINGLCKLGEVTKARELFDEI 722
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ +L D+ +Y+ +I G C+ EA + F EMI KG+ P + L G + L
Sbjct: 723 EEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNL 782
Query: 277 RTWRRLKKKLDEESITFGSEFQN 299
L + ++S+ S F +
Sbjct: 783 EKALSLFHEAQQKSVGSLSAFNS 805
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 136/268 (50%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+LI G+ K I+ A R EMI RG++ NVVTYN ++ G+ + +
Sbjct: 344 PNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEM------ 397
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F+EM + G+EPD ++++++ Y ++H + + L MK + + P+ T
Sbjct: 398 ----AKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT 453
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ LC ++ A E+L +M+RNGV P+ Y K Y A++L + M
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + +P++ YN LI +++ + + + + + +Y I+ + +
Sbjct: 514 ANGV-LPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ A +YF +M+ G++P V + L +G
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKG 600
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 150/334 (44%), Gaps = 47/334 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +Y SLI G+CK I+ A + EM+ G+ PN+V YN L+NG+C+
Sbjct: 658 VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGE------ 711
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP--- 117
+ A ++FDE+ + + PDV ++S ++ Y ++ + + M KGI P
Sbjct: 712 ----VTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGY 767
Query: 118 -------------------------------TVATYTSVVKCLCSCGRIEDAEELLGEMV 146
+++ + S++ C G++ +A EL +MV
Sbjct: 768 IYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMV 827
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL-NR 205
++P+ TY Y + A +L+ M+ ++ +PN TY L+ + + NR
Sbjct: 828 DKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI-IPNTLTYTSLLLSYNQIGNR 886
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
M+ ++ ++ + D +Y ++ C++ K EA + + + +G+ + F+
Sbjct: 887 FKMI-SLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDA 945
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
L L + + T L ++ +E ++ S+ N
Sbjct: 946 LIFHLCKEKQISTVLELLSEMGKEELSLSSKTCN 979
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 140/267 (52%), Gaps = 14/267 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+++ Y+++I+ K + A + ++ GV P+V YN L++G C+
Sbjct: 623 IPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCK--------- 673
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I A +++DEM GI P++ ++ +++ + + + + + ++EK + P V
Sbjct: 674 -EGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVV 732
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK-DANGAMKLYRQ 179
TY++++ C G + +A +L EM+ G+SP Y C + G++ + A+ L+ +
Sbjct: 733 TYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIY-CILIDGCGKEGNLEKALSLFHE 791
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
++ V ++ +N LI F ++ RE+++ + +L ++ +YT+LI + +
Sbjct: 792 AQQKS--VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAE 849
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETL 266
+EA Q F++M + ++P +T+ +L
Sbjct: 850 MMEEAEQLFLDMETRNIIPNTLTYTSL 876
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 129/272 (47%), Gaps = 12/272 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT++I CK+ + + L EM E+ +PN+ TYN + G+C+ +
Sbjct: 239 VPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGA------ 291
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A +V M +G+ PD ++++++ + + + + + M G+ P
Sbjct: 292 ----VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ G IE+A + EM+ G+ + TYN + AM L+ +M
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L P+ TYN+LI ++ + M E+ +K +L +Y++LI GLC
Sbjct: 408 LMAGL-EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++A + +MI G+ P + TL + +Q
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQ 498
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 138/316 (43%), Gaps = 26/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH-PNER 60
P+ Y LI G+ K + + A L EM R + P+ TY+VL++G+C + L NE
Sbjct: 414 PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEV 473
Query: 61 FEKTIRNAEK------------------------VFDEMRVRGIEPDVTSFSIVLHVYSR 96
++ IRN K + M G+ PD+ ++ ++ R
Sbjct: 474 LDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCR 533
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A K + + L M EKGI P TY + + G I+ AE +M+ +G+ P+
Sbjct: 534 AKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVI 593
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y K + + A+ ++ M E L +P+I Y+ +I + ++
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGL-IPDIRAYSAIIHSLSKNGKTKEAMGVFLKF 652
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + D+ Y LI G C++ ++A Q + EM+ G+ P V + TL GL + +
Sbjct: 653 LKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEV 712
Query: 277 RTWRRLKKKLDEESIT 292
R L +++E+ +
Sbjct: 713 TKARELFDEIEEKDLV 728
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 141/307 (45%), Gaps = 17/307 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y + I G C+ +D A M+E+G+ P+ TY +L++G C+
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCK---------- 323
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K + A+ +F+ M G+ P+ +++ ++ + + + +L + M +G+ V T
Sbjct: 324 QKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVT 383
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ + G + A L EM+ G+ P TYN Y D A +L +MK
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMK 443
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+ TY++LI + + E+ + + + + ++ Y LI ++ ++
Sbjct: 444 ARKL-TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRY 502
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI-----TFGSE 296
+ A + MI G+LP + L GL ++ + + L + E+ I T+G+
Sbjct: 503 EMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA- 561
Query: 297 FQNYHFK 303
F N + K
Sbjct: 562 FINLYSK 568
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 119/276 (43%), Gaps = 12/276 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + +L+ K N + + + G M+E + P+V TY ++ C+
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGD------- 257
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + V EM + +P++ +++ + + +L+ M EKG+ P T
Sbjct: 258 ---VIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHT 313
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +V C R ++A+ + M +G++P+ TY + + A+++ +M
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI 373
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L + N+ TYN +IG M ++N + + L D +Y +LI G +
Sbjct: 374 TRGLKL-NVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDM 432
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+AC+ EM + L P T+ L GL S L+
Sbjct: 433 AKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 124/291 (42%), Gaps = 33/291 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP--- 57
+P+V Y+++I G+CK + A + EMI +G+ P+ Y +L++G + +L
Sbjct: 728 VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALS 787
Query: 58 --NERFEKTIRN-------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+E +K++ + A ++FD+M + + P++ +++I++ Y +
Sbjct: 788 LFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGK 847
Query: 97 AH----KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
A QL LD M+ + I P TYTS++ G L +M G++
Sbjct: 848 AEMMEEAEQLFLD----METRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIAC 903
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
A Y Y + A+KL + + + + + ++ LI ++ V E+
Sbjct: 904 DAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLED-DVFDALIFHLCKEKQISTVLEL 962
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
+ + EL L + L+ G + EA + M G +P ++
Sbjct: 963 LSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSL 1013
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 8/183 (4%)
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA-N 171
+G PT+ ++++ L + ++ G MV + P TY K + D
Sbjct: 201 EGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIK 260
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
G M L KE C PN+ TYN IG +D E+ + LG D +YT+L
Sbjct: 261 GKMVLSEMEKE---CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLL 317
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ G C++++ KEA F M GL P + T+ L G I+ + R+K +E I
Sbjct: 318 VDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIK----DEMI 373
Query: 292 TFG 294
T G
Sbjct: 374 TRG 376
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 132/266 (49%), Gaps = 11/266 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y S+I CK +D A L M++ GV P+ +TYN +L+G C +S P E
Sbjct: 228 LPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC--SSGQPKE- 284
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +MR G+EPDV ++S+++ + + + + M ++G+ P +
Sbjct: 285 -------AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++++ + G + + LL MVRNG+ P ++ Y + + AM ++ +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L PN TY +IG+ R++ + + L Y LIHGLC K
Sbjct: 398 RQQGL-NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
W+ A + +EM+++G+ + F ++
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSI 482
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 143/287 (49%), Gaps = 14/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G+ K D A EM++RG+ P+VVTYN ++ +C+
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK---------- 243
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A +V + M G+ PD +++ +LH Y + +P+ ++ L M+ G+ P V T
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ LC GR +A ++ M + G+ P TY + Y + L M
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+ + ++ILI + ++D +++ ++ L + +Y +I LC+ +
Sbjct: 364 RNGI-HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
++A YF +MI++GL P + + +L GL + W R ++ + E
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN---KWERAEELILE 466
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 152/359 (42%), Gaps = 79/359 (22%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y S+++G+C + A FL +M GVEP+VVTY++L++ +C+ N R
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK------NGR 316
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTS---------------------------------- 86
A K+FD M RG++P++T+
Sbjct: 317 ----CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHY 372
Query: 87 -FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
FSI++ Y++ K ++ + M+++G+ P TY +V+ LC GR+EDA +M
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV------------------ 187
+ G+SP YN A +L +M + +C+
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 188 ----------------PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
PN+ TYN LI + +MD ++ + + L + +Y+ L
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
I+G C+ + ++A F EM G+ P +T+ + +GL Q+ + L ++ E
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 145/299 (48%), Gaps = 11/299 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +Y SLI+G C N+ + AE + EM++RG+ N + +N +++ C+
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK---------- 488
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +EK+F+ M G++P+V +++ +++ Y A K ++ L+ M G+ P T
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C R+EDA L EM +GVSP TYN + + A +LY ++
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + + TYNI++ D +++ ++ +L L+ ++ ++I L + +
Sbjct: 609 ESGTQI-ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
EA FV GL+P T+ + +I +L +L +++ T S N+
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 135/295 (45%), Gaps = 14/295 (4%)
Query: 7 YTSLIYGWCKINRI-DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+T L+ G C R D + L M E G PNV +YN+LL G+C R ++ +
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLC------DENRSQEAL 178
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+ D+ R G PDV S++ V++ + + + + M ++GI P V TY S+
Sbjct: 179 ELLHMMADD-RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSI 237
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ LC ++ A E+L MV+NGV P TYN Y A+ ++M+ D +
Sbjct: 238 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGV 297
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
P++ TY++L+ R R+I++ + L ++ +Y L+ G K E
Sbjct: 298 -EPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356
Query: 246 QYFVEMIEKGLLPQKVTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFGS 295
M+ G+ P F L +G + ML + ++ L+ ++T+G+
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 28/282 (9%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V P++ TY +L+ CR L + + N K +G D +F+ +L
Sbjct: 83 VTPDLCTYGILIGCCCRAGRL---DLGFAALGNVIK-------KGFRVDAIAFTPLLKGL 132
Query: 95 SRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV--RNGVS 151
+ ++D L M E G P V +Y ++K LC R ++A ELL M R G S
Sbjct: 133 CADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGS 192
Query: 152 PS-----AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
P N FFKE D++ A Y +M + + +P++ TYN +I M
Sbjct: 193 PPDVVSYTTVINGFFKE----GDSDKAYSTYHEMLDRGI-LPDVVTYNSIIAALCKAQAM 247
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D E+ N + + + D +Y ++HG C + KEA + +M G+ P VT+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 267 YRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNYHFK 303
L ++ R++ K+ L E T+G+ Q Y K
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATK 349
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 7/216 (3%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
+A VFDE+ RG + + L +R P ++ + N M G + P + TY
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C C GR++ LG +++ G A + K K + AM + + +
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV---KGSELGLDLDSYTMLIHGLCEKQK 240
C+PN+ +YNIL+ NR E+ + + +G D+ SYT +I+G ++
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+A + EM+++G+LP VT+ ++ L ++ +
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 84/193 (43%), Gaps = 25/193 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPNER 60
PN Y++LI G+CKI+R++ A EM GV P+++TYN++L G+ + R + E
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Query: 61 F------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ K +A ++F + + ++ + +F+I++ +
Sbjct: 604 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 663
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D G+ P TY + + + G +E+ ++L M NG + +
Sbjct: 664 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGM 723
Query: 157 YNCFFKEYRGRKD 169
N +E R +
Sbjct: 724 LNFIVRELLQRGE 736
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 21/292 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE-- 59
PNV Y L+ C+ ++D A + L EM +G +P+ V+Y +++ +C+ +
Sbjct: 177 PNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAREL 236
Query: 60 --RFEKTI----------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
+FE + + A + +EM RG++P+V S+S V+ S +
Sbjct: 237 AMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVE 296
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
LSL M +G P V T+TS++K GR+ DA L M+R GVSP+ YN
Sbjct: 297 LSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLI 356
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
+ + A+ ++ QM++D + PN+ TY+ +I F + E WN +
Sbjct: 357 HGLCSDGNMDEAISVWNQMEKDSI-RPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGC 415
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ YT ++ LC+ + +A MI G P +TF +GL ++
Sbjct: 416 RPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRA 467
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 21/295 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+VK+Y ++ N M M G+EPNV TYNVLL +C+ +
Sbjct: 142 PSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKL 201
Query: 56 ---------HPNE-RFEKTIRNAEKVFDEMRVRGI----EPDVTSFSIVLHVYSRAHKPQ 101
P++ + I + K+ D + R + EP V ++ ++H + + +
Sbjct: 202 LVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFK 261
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
+ D +N M ++G+ P V +Y++V+ CL G +E + + G M G P+ +T+
Sbjct: 262 EAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLI 321
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
K + R A+ L+ M + + PN+ YN LI + MD +WN ++ +
Sbjct: 322 KGFFVRGRVGDAVGLWNLMIREGVS-PNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSI 380
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
++ +Y+ +I+G + AC+ + +MI G P V + + L Q M
Sbjct: 381 RPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMF 435
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 19/292 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV+ +TSLI G+ R+ A MI GV PNVV YN L++G+C ++
Sbjct: 312 PNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMD----- 366
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V+++M I P+VT++S +++ ++++ + + N M G P V
Sbjct: 367 -----EAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVV 421
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +V LC + A +L+ M+ +G P+ T+N F K AM + QM+
Sbjct: 422 YTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQME 481
Query: 182 EDDLCVPNIHTYN-ILIGMFMALNRMDMVREIWNHVKGSE---LGLDLDSYTMLIHGLCE 237
+ + C+PNI TYN +L G+F R + RE ++ E + D +Y +++G
Sbjct: 482 KYE-CLPNIRTYNELLDGLF----RANAFREACGLIRELEERKVEFDCVTYNTIMYGFSF 536
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++ Q +M+ G+ +T T + ++T ++ + E
Sbjct: 537 NGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAE 588
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 139/292 (47%), Gaps = 11/292 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V +Y +LI+G CK R A + EM++RGV+PNV++Y+ +++ + +
Sbjct: 242 PVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGN------- 294
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + VF M VRG P+V +F+ ++ + + ++ N M +G+ P V
Sbjct: 295 ---VELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVA 351
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LCS G +++A + +M ++ + P+ TY+ + D A + + +M
Sbjct: 352 YNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMI 411
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN+ Y ++ + ++ D ++ +++ + ++ I GLC +
Sbjct: 412 NCG-CRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRV 470
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
+ A +M + LP T+ L GL +++ R L ++L+E + F
Sbjct: 471 EWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEF 522
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 118/285 (41%), Gaps = 45/285 (15%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
E G EP+V YN++L+ + + + +++ M+ G+EP+V +++++L
Sbjct: 137 EFGCEPSVKIYNLVLDALLS----------QNLFKMINALYNNMKSEGLEPNVFTYNVLL 186
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE----------- 140
+ K + L M KG P +YT+V+ +C G ++ A E
Sbjct: 187 KALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPV 246
Query: 141 -------------------LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
L+ EMV GV P+ +Y+ + ++ ++ +M
Sbjct: 247 YNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMF 306
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN+ T+ LI F R+ +WN + + ++ +Y LIHGLC
Sbjct: 307 VRG-CRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNM 365
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML----RTWRRL 282
EA + +M + + P T+ T+ G +S L TW ++
Sbjct: 366 DEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKM 410
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 13/234 (5%)
Query: 47 NGVCRRASLHPNERFEKTIRNAEK-----VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
+G + L +K RN E + +M++ + F V+ Y R++ +
Sbjct: 67 SGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGE 126
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
L ++E G P+V Y V+ L S + L M G+ P+ TYN
Sbjct: 127 QGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLL 186
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
K +GA KL +M C P+ +Y +I L +D RE+ +
Sbjct: 187 KALCQNGKVDGACKLLVEMSNKG-CDPDDVSYTTVISSMCKLGDVDKAREL-----AMKF 240
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ Y LIHG+C++ ++KEA EM+++G+ P +++ T+ L SDM
Sbjct: 241 EPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCL--SDM 292
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP-TVATYTSVVKCLCSCGRIEDAEELLG 143
S S V+ V + H SL+ + G T TY +++ L ++ LL
Sbjct: 39 VSESHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQ 98
Query: 144 EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL 203
+M V S E + K YR +K++ +++E C P++ YN+++ ++
Sbjct: 99 QMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFG-CEPSVKIYNLVLDALLSQ 157
Query: 204 NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
N M+ ++N++K L ++ +Y +L+ LC+ K AC+ VEM KG P V++
Sbjct: 158 NLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSY 217
Query: 264 ETLYRGLIQSDMLRTWRRLKKKLD 287
T+ + + + R L K +
Sbjct: 218 TTVISSMCKLGDVDKARELAMKFE 241
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN++ Y L+ G + N A + E+ ER VE + VTYN ++ G
Sbjct: 486 LPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGF----------S 535
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL-NFMKEKGICPTV 119
F + ++ +M V GI+ D + + ++ Y + K + ++ L N EK +
Sbjct: 536 FNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADI 595
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
T+T ++ +C+ E+A L EM++ G+ P+ T+N + + + G +++
Sbjct: 596 ITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGPIRI 652
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 134/271 (49%), Gaps = 14/271 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CK R L ++ V+P+VV YN ++N +C+ K +
Sbjct: 166 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKN----------KLLG 215
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A V+ EM V+GI PDV +++ ++H + K + + LN MK K I P V T++ ++
Sbjct: 216 DACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLI 275
Query: 127 KCLCSCGR---IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
L G+ +++A L EM + P TYN A+ L ++MKE
Sbjct: 276 DALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEH 335
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
+ P++++Y IL+ R+++ +E + H+ L++ Y ++I+GLC+ + E
Sbjct: 336 GI-QPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGE 394
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
A +M KG +P +TF T+ L + D
Sbjct: 395 AMDLKSKMEGKGCMPNAITFRTIICALSEKD 425
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 143/301 (47%), Gaps = 21/301 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +LI G C I F +++ +G + + V+Y L+NG+C+
Sbjct: 126 PDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGE------- 178
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ ++ ++ ++PDV ++ +++ + + D + M KGI P V T
Sbjct: 179 ---TKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 235
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF----KEYRGRKDANGAMKLY 177
YT+++ C G++++A LL EM ++P T++ KE + +K + AM L+
Sbjct: 236 YTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGK-KKMVDEAMSLF 294
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+MK ++ +P+I TYN LI + ++ + +K + D+ SYT+L+ GLC+
Sbjct: 295 EEMKHKNM-IPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCK 353
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD-----EESIT 292
+ + A ++F ++ KG + + GL ++ + LK K++ +IT
Sbjct: 354 GGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAIT 413
Query: 293 F 293
F
Sbjct: 414 F 414
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 126/288 (43%), Gaps = 14/288 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + LI +C I +A +++RG P+ +T N L+ G+C R + F
Sbjct: 91 PDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYF 150
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
D++ +G + D S+ +++ +A + + L ++ + P V
Sbjct: 151 H----------DQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVM 200
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC + DA ++ EM+ G+SP TY + A L +MK
Sbjct: 201 YNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMK 260
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVRE---IWNHVKGSELGLDLDSYTMLIHGLCEK 238
++ P+++T+++LI + MV E ++ +K + D+ +Y LI GLC+
Sbjct: 261 LKNIN-PDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKN 319
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ A EM E G+ P ++ L GL + L + + L
Sbjct: 320 HHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHL 367
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 14/259 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V MY ++I CK + A EMI +G+ P+VVTY L++G C +
Sbjct: 196 PDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKM------ 249
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF---MKEKGICPT 118
+ A + +EM+++ I PDV +FS+++ + K ++ + ++ MK K + P
Sbjct: 250 ----KEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPD 305
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ TY S++ LC +E A LL EM +G+ P +Y A + ++
Sbjct: 306 IVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQ 365
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ C N+ YN++I ++ + ++G + ++ +I L EK
Sbjct: 366 HLLVKG-CHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEK 424
Query: 239 QKWKEACQYFVEMIEKGLL 257
+ +A + EMI +GLL
Sbjct: 425 DENDKAEKILREMIARGLL 443
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 80/150 (53%), Gaps = 10/150 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y SLI G CK + ++ A L EM E G++P+V +Y +LL+G+C+ L
Sbjct: 303 IPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRL----- 357
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A++ F + V+G +V ++++++ +A ++D + M+ KG P
Sbjct: 358 -----EIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAI 412
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
T+ +++ L + AE++L EM+ G+
Sbjct: 413 TFRTIICALSEKDENDKAEKILREMIARGL 442
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGA 173
GI P + T + ++ C C I A + +++ G P A T N K R +
Sbjct: 88 GITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKT 147
Query: 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
+ + Q+ + + +Y LI V + ++G + D+ Y +I+
Sbjct: 148 LYFHDQVVAQGFQLDQV-SYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIIN 206
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
LC+ + +AC + EMI KG+ P VT+ TL G
Sbjct: 207 SLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGF 243
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P +N K + L++Q + + + P++ T +ILI F + +
Sbjct: 56 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGI-TPDLCTLSILINCFCHQAHITLAFS 114
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
++ ++ D + LI GLC + + K+ + +++ +G +V++ TL GL
Sbjct: 115 VFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLC 174
Query: 272 QSDMLRTWRRLKKKLDEESI 291
++ + RL +KL+ S+
Sbjct: 175 KAGETKAVARLLRKLEGHSV 194
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 139/315 (44%), Gaps = 26/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PNV YT LI G CK N++D A + L EM E+G+ P+VVTYN L++G C+
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391
Query: 54 -------SLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
S PN R ++ + A + ++M R + P + +++ ++H +
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCK 451
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + L+ M E G+ P TY+ + LC GR+E+A L + GV +
Sbjct: 452 VNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVI 511
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y Y + A L +M +D C+PN +TYN+LI +M + +
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERML-NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + +YT+LI + + + A + F M+ G P T+ ML
Sbjct: 571 LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGML 630
Query: 277 RTWRRLKKKLDEESI 291
+ K++EE I
Sbjct: 631 EEVDDVIAKMNEEGI 645
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 126/285 (44%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V+ YT LIY R A EM E+G EPNV TY VL++G+C+
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCK---------- 346
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A K+ EM +G+ P V +++ ++ Y + + + L+ M+ P T
Sbjct: 347 ENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRT 406
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC ++ A LL +M+ +SPS TYN D A +L M
Sbjct: 407 YNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN 466
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ L VP+ TY++ I R++ +++ VK + + YT LI G C+ K
Sbjct: 467 ENGL-VPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKI 525
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A M+ LP T+ L GL + ++ L K+
Sbjct: 526 DVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 140/326 (42%), Gaps = 46/326 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P ++ Y +++ K ID + E++ + PN+ T+N ++NG C+ ++ E +
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A G+ PD +++ ++ + R + + M +KG +
Sbjct: 217 ASKIVQA----------GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS 266
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC GRI +A +L +M + P+ TY G A+ L+ +MK
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVR------------------------------- 210
E C PN+HTY +LI N+MD R
Sbjct: 327 EKG-CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMI 385
Query: 211 ----EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
EI + ++ + G + +Y LI GLC+K+K +A +M+E+ L P +T+ +L
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSL 445
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESIT 292
G + + L + RL ++E +
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLV 471
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 133/266 (50%), Gaps = 17/266 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVL---LNGVCRRASLHPNERFEK 63
YT+LI+G C+ RI+ A + +M E P V TY VL L+G R+
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVE--------- 317
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
A +F+EM+ +G EP+V ++++++ + +K + L+ M EKG+ P+V TY
Sbjct: 318 ----ALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
+++ C G I+DA E+L M N P+ TYN ++ + AM L +M E
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
L P++ TYN LI +N ++ + + + + L D +Y++ I LC++ + +E
Sbjct: 434 KLS-PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRG 269
A F + KG+ +V + L G
Sbjct: 493 AGTLFDSVKAKGVKANEVIYTALIDG 518
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF- 61
N +YT+LI G+CK+ +ID+A L M+ PN TYNVL+ G+C+ +
Sbjct: 508 NEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLV 567
Query: 62 ------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+ +A KVF+ M G +PDV +++ LH Y
Sbjct: 568 AKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQ 627
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ D + M E+GI P + TYT ++ G A + L MV G PS
Sbjct: 628 GMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIV 687
Query: 158 NCFFK---------EYRGRKDANG---------AMKLYRQMKEDDLCVPNIHTYNILIGM 199
+ K E R + A+KL+ +M E C ++ Y LI
Sbjct: 688 SILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHG-CTIDVSIYGALIAG 746
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
F R++ + + +H+K + D Y L+ C+ + EA + M+E GLLP
Sbjct: 747 FCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPL 806
Query: 260 KVTFETLYRGL 270
+++ L GL
Sbjct: 807 LESYKLLVCGL 817
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 118/278 (42%), Gaps = 44/278 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP--N 58
+P++ YT LI G+ ++ A FL M++ G +P++ ++L+ + + +
Sbjct: 646 LPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS 705
Query: 59 ERFEKTIRN------AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
E ++ N A K+F++M G DV+ + ++ + + + + + ++ MKE
Sbjct: 706 EIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKE 765
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
+G+ P+ Y S++ C C G +A L+ MV NG+ P E+Y
Sbjct: 766 RGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKL------------- 812
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
++ G+++ + + +++ + D ++ +LI
Sbjct: 813 ----------------------LVCGLYIE-GSNEKAKAVFHGLLSCGYNYDEVAWKVLI 849
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
GL ++ E + M EKG P +T+ L GL
Sbjct: 850 DGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 141/301 (46%), Gaps = 27/301 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
PN+ +TSLI G CK I A L EM+++G +PNV T+ L++G+C++ R
Sbjct: 299 PNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRL 358
Query: 61 FEKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
F K +R+ AE + M+ +G+ P+ +++ ++ +S
Sbjct: 359 FLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHS 418
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A + + + ++ M ++G + TY + + LC GR +A +LL + R G+
Sbjct: 419 KAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTV 478
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY E R D A+ + +M + + P++HTYN LI F RM+ +++
Sbjct: 479 TYTILISELCRRADTREALVFFSKMFKAGV-QPDMHTYNTLIAAFSRQRRMEESEKLFAE 537
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
G L ++YT +I G C + A ++F M + G P +T+ L GL +
Sbjct: 538 AVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESK 597
Query: 276 L 276
L
Sbjct: 598 L 598
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 46/289 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN K YT LI G K + A + M + G N+ TYN ++ +C++ R
Sbjct: 404 VPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKG------R 457
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F + + +K F G++ D +++I++ R + +L + M + G+ P +
Sbjct: 458 FLEACKLLKKGFR----LGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMH 513
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ R+E++E+L E V G+ P+ ETY Y ++ + A+K + +M
Sbjct: 514 TYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRM 573
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D C P+ TY LI GLC++ K
Sbjct: 574 -SDHGCTPDSLTYGALIS-----------------------------------GLCKESK 597
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
EACQ + M++KGL P +VT TL + D T + ++LD++
Sbjct: 598 LDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDKK 646
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 16/262 (6%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRN 67
T +I +C+ + + +E G++PN++ + L+NG+C+R S I+
Sbjct: 270 TLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGS----------IKQ 319
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK-LNFMKEKGICPTVATYTSVV 126
A ++ +EM +G +P+V + + ++ + + + L ++ P V TYTS++
Sbjct: 320 AFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMI 379
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C ++ AE LL M G+ P+ +TY C + + A +L M ++
Sbjct: 380 HGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFS 439
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLCEKQKWKEA 244
NI TYN I R ++ KG LGL D +YT+LI LC + +EA
Sbjct: 440 A-NIFTYNAFIDSLCKKGRFLEACKLLK--KGFRLGLQADTVTYTILISELCRRADTREA 496
Query: 245 CQYFVEMIEKGLLPQKVTFETL 266
+F +M + G+ P T+ TL
Sbjct: 497 LVFFSKMFKAGVQPDMHTYNTL 518
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 136/330 (41%), Gaps = 58/330 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------- 54
PNV YTS+I+G+CK ++++ AE L M E+G+ PN TY L++G + +
Sbjct: 370 PNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYEL 429
Query: 55 --LHPNERFEKTIRNAEKVFDEMRVRG----------------IEPDVTSFSIVLHVYSR 96
L E F I D + +G ++ D +++I++ R
Sbjct: 430 MDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCR 489
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +L + M + G+ P + TY +++ R+E++E+L E V G+ P+ ET
Sbjct: 490 RADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKET 549
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y Y ++ + A+K + +M D C P+ TY LI +++D +++ +
Sbjct: 550 YTSMICGYCRDRNVSLALKFFNRM-SDHGCTPDSLTYGALISGLCKESKLDEACQLYEAM 608
Query: 217 KGSELG--------------------------------LDLDSYTMLIHGLCEKQKWKEA 244
L L + + LI LC ++K A
Sbjct: 609 VDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDKKLWIRTVNTLIRKLCSERKVGMA 668
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+F ++++K +VT +S+
Sbjct: 669 VLFFHKLLDKDQNVDRVTLTAFTTACYESN 698
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 120/279 (43%), Gaps = 15/279 (5%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+ AE EM RGV P+ V+Y ++ CR + +R+ K +M RG
Sbjct: 212 VGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLK----------DMVRRG 261
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
D + ++++ + + E G+ P + +TS++ LC G I+ A
Sbjct: 262 FVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAF 321
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
E+L EMV+ G P+ T+ + A +L+ ++ D PN+HTY +I
Sbjct: 322 EMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHG 381
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ ++++ + + +K L + +YT LI G + +++A + M ++G
Sbjct: 382 YCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSAN 441
Query: 260 KVTFETLYRGLIQSD-MLRTWRRLKK----KLDEESITF 293
T+ L + L + LKK L +++T+
Sbjct: 442 IFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTY 480
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 15/250 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT LI C+ A F +M + GV+P++ TYN L+ R ++ +
Sbjct: 480 YTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSR----------QRRME 529
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+EK+F E G+ P +++ ++ Y R L+L N M + G P TY +++
Sbjct: 530 ESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALI 589
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC ++++A +L MV G+SP T EY + D+ AM + ++ +
Sbjct: 590 SGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDKKLW- 648
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
I T N LI + ++ M ++ + + +D + T E K+
Sbjct: 649 ---IRTVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTACYESNKYALVSD 705
Query: 247 YFVEMIEKGL 256
E I KG+
Sbjct: 706 -LSERISKGI 714
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 135/267 (50%), Gaps = 13/267 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y SLI G C +I+ A +M+ GV+PN++TY+ L+NG C+
Sbjct: 328 IPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNG------- 380
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A +FD ++ +G P +++++ Y + K M+ +GI P V
Sbjct: 381 ---MMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVG 437
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC G IE A++L ++ G+ P T++ + Y R ++ A L ++M
Sbjct: 438 TYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEM 496
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV-KGSELGLDLDSYTMLIHGLCEKQ 239
+ L P TYNI++ + + + + K L +++ SY +L+ G +K
Sbjct: 497 SKMGL-KPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETL 266
K ++A EM+EKGL+P ++T+E +
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 9/268 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + +I CK +++ A + +M G PNVV+YN L++G C+ L N +
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCK---LGGNGKM 277
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K A+ V EM + P++T+F+I++ + + SL M ++ + P V T
Sbjct: 278 YK----ADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVIT 333
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC+ G+I +A + +MV GV P+ TY+ + A+ ++ +K
Sbjct: 334 YNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVK 393
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P YN+LI + L ++D + ++ + D+ +Y LI GLC
Sbjct: 394 GQG-TRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ A + F ++ KG LP VTF L G
Sbjct: 453 EAAKKLFDQLTNKG-LPDLVTFHILMEG 479
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 114/229 (49%), Gaps = 4/229 (1%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ E ++ EM R I+P+V +F++V++ + K + D + MK G P V +Y +++
Sbjct: 206 DVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLI 265
Query: 127 KCLCSC---GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
C G++ A+ +L EMV N VSP+ T+N + + G++K++++M +
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQ 325
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
D+ +PN+ TYN LI +++ + + + + + +L +Y LI+G C+ KE
Sbjct: 326 DV-IPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKE 384
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A F + +G P + L + + LK++++ E I
Sbjct: 385 ALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ + L+ G+C A L EM + G++P +TYN+++ G C+ +L
Sbjct: 467 LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATN 526
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + R + +V S++++L YS+ K + + LN M EKG+ P
Sbjct: 527 MRTQME---------KERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRI 577
Query: 121 TYTSVVKCLCSCGRIEDAE 139
TY V + + G + D E
Sbjct: 578 TYEIVKEEMVDKGFVPDIE 596
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 139/315 (44%), Gaps = 26/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PNV YT LI G CK N++D A + L EM E+G+ P+VVTYN L++G C+
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391
Query: 54 -------SLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
S PN R ++ + A + ++M R + P + +++ ++H +
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCK 451
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + L+ M E G+ P TY+ + LC GR+E+A L + GV +
Sbjct: 452 VNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVI 511
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y Y + A L +M +D C+PN +TYN+LI +M + +
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERML-NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + +YT+LI + + + A + F M+ G P T+ ML
Sbjct: 571 LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGML 630
Query: 277 RTWRRLKKKLDEESI 291
+ K++EE I
Sbjct: 631 EEVDDVIAKMNEEGI 645
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 126/285 (44%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V+ YT LIY R A EM E+G EPNV TY VL++G+C+
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCK---------- 346
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A K+ EM +G+ P V +++ ++ Y + + + L+ M+ P T
Sbjct: 347 ENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRT 406
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC ++ A LL +M+ +SPS TYN D A +L M
Sbjct: 407 YNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN 466
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ L VP+ TY++ I R++ +++ VK + + YT LI G C+ K
Sbjct: 467 ENGL-VPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKI 525
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A M+ LP T+ L GL + ++ L K+
Sbjct: 526 DVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 140/326 (42%), Gaps = 46/326 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P ++ Y +++ K ID + E++ + PN+ T+N ++NG C+ ++ E +
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A G+ PD +++ ++ + R + + M +KG +
Sbjct: 217 ASKIVQA----------GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS 266
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC GRI +A +L +M + P+ TY G A+ L+ +MK
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVR------------------------------- 210
E C PN+HTY +LI N+MD R
Sbjct: 327 EKG-CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMI 385
Query: 211 ----EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
EI + ++ + G + +Y LI GLC+K+K +A +M+E+ L P +T+ +L
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSL 445
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESIT 292
G + + L + RL ++E +
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLV 471
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 133/266 (50%), Gaps = 17/266 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVL---LNGVCRRASLHPNERFEK 63
YT+LI+G C+ RI+ A + +M E P V TY VL L+G R+
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVE--------- 317
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
A +F+EM+ +G EP+V ++++++ + +K + L+ M EKG+ P+V TY
Sbjct: 318 ----ALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
+++ C G I+DA E+L M N P+ TYN ++ + AM L +M E
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
L P++ TYN LI +N ++ + + + + L D +Y++ I LC++ + +E
Sbjct: 434 KLS-PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRG 269
A F + KG+ +V + L G
Sbjct: 493 AGTLFDSVKAKGVKANEVIYTALIDG 518
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 129/322 (40%), Gaps = 55/322 (17%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF- 61
N +YT+LI G+CK+ +ID+A L M+ PN TYNVL+ G+C+ +
Sbjct: 508 NEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLV 567
Query: 62 ------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+ +A KVF+ M G +PDV +++ LH Y
Sbjct: 568 AKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQ 627
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ D + M E+GI P + TYT ++ G A + L MV G PS
Sbjct: 628 GMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIV 687
Query: 158 NCFFK---------EYRGRKDANG--------------------AMKLYRQMKEDDLCVP 188
+ K E R + A+KL+ +M E C
Sbjct: 688 SILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHG-CTI 746
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
++ Y LI F R++ + + +H+K + D Y L+ C+ + EA +
Sbjct: 747 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLV 806
Query: 249 VEMIEKGLLPQKVTFETLYRGL 270
M+E GLLP +++ L GL
Sbjct: 807 DAMVENGLLPLLESYKLLVCGL 828
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 142/293 (48%), Gaps = 15/293 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +LI G C ++ A + M+E G +P++VTYN ++NG+CR
Sbjct: 156 PDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSL---- 211
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +M R ++ DV ++S ++ R ++ M+ KGI +V T
Sbjct: 212 ------AFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+V+ LC G+ D LL +MV + P+ T+N + A +LY++M
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PNI TYN L+ + NR+ + + + ++ D+ ++T LI G C ++
Sbjct: 326 TRGI-SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
+ + F + ++GL+ VT+ L +G QS + +L ++L +E ++ G
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI----KLAEELFQEMVSHG 433
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 147/288 (51%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V Y SL+ G CK + + L +M+ R + PNV+T+NVLL+ +
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK---------- 310
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ A +++ EM RGI P++ +++ ++ Y ++ + + L+ M P + T
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+TS++K C R++D ++ + + G+ +A TY+ + + A +L+++M
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +P++ TY IL+ +++ EI+ ++ S++ L + YT +I G+C+ K
Sbjct: 431 SHGV-LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++A F + KG+ P +T+ + GL + L L +K++E+
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 142/303 (46%), Gaps = 16/303 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ +I +C+ + A LG++++ G EP+ T+N L+NG+C E
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLC----------LE 171
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A + D M G +PD+ +++ +++ R+ L+ D L M+E+ + V TY
Sbjct: 172 GKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTY 231
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++++ LC G I+ A L EM G+ S TYN + N L + M
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
++ VPN+ T+N+L+ +F+ ++ E++ + + ++ +Y L+ G C + +
Sbjct: 292 REI-VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK-LDEESITFGSEF 297
EA M+ P VTF +L +G D ++ +R + K+ L ++T+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 298 QNY 300
Q +
Sbjct: 411 QGF 413
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 11/234 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +TSLI G+C + R+D + + +RG+ N VTY++L+ G C+
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK------- 418
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I+ AE++F EM G+ PDV ++ I+L K + +L+ +++ + +
Sbjct: 419 ---IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++++ +C G++EDA L + GV P+ TY + + A L R+M+
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
ED PN TYN LI + + ++ +K D S M+I L
Sbjct: 536 EDG-NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 117/272 (43%), Gaps = 11/272 (4%)
Query: 21 DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80
D A EMI P +V ++ + + R + F K ++ + GI
Sbjct: 70 DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCK----------QLELNGI 119
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
++ + +I+++ + R K + L + + G P T+ +++ LC G++ A
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVV 179
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
L+ MV NG P TYN D + A + R+M+E ++ ++ TY+ +I
Sbjct: 180 LVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNV-KADVFTYSTIIDSL 238
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+D ++ ++ + + +Y L+ GLC+ KW + +M+ + ++P
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+TF L ++ L+ L K++ I+
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 124/268 (46%), Gaps = 11/268 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +LI G C + +D A L EM GV+PNVV Y+ LL G CR R++
Sbjct: 157 DVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSG------RWQ 210
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ KVF++M RGI+PDV F+ ++ + K + + M ++G+ P V TY
Sbjct: 211 ----DVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTY 266
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ LC G + +A L EM GV+P TYN G + + AM +M +
Sbjct: 267 NVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQ 326
Query: 183 DDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D V P++ T+N +I + RM ++ + +L +Y LI G K
Sbjct: 327 GDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKV 386
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
K A E+ GL P T+ L G
Sbjct: 387 KMAMNLMDELAISGLEPDSFTYSILING 414
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 138/304 (45%), Gaps = 17/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+++ G C R A L M GV +VVTY L+ G+C + L
Sbjct: 121 PNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDA---- 176
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ DEM G++P+V +S +L Y R+ + Q M +GI P V
Sbjct: 177 ------ALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIM 230
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T ++ LC G+ A ++ MV+ G+ P+ TYN A+ L ++M
Sbjct: 231 FTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEM- 289
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLCEKQ 239
+D P++ TYN LI + MD + + ++ D ++ +IHGLC+
Sbjct: 290 DDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIG 349
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ +A + M E+G + VT+ L G ++ ++ L +DE +I+ G E +
Sbjct: 350 RMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNL---MDELAIS-GLEPDS 405
Query: 300 YHFK 303
+ +
Sbjct: 406 FTYS 409
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 143/289 (49%), Gaps = 13/289 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y+ L+ G+C+ R + +M RG++P+V+ + L++ +C+
Sbjct: 191 PNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCK---------- 240
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A KV D M RG+EP+V +++++++ + + +L M +KG+ P V T
Sbjct: 241 EGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVT 300
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNG--VSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++ L +++A L EM++ V P T+N A+K+ R+
Sbjct: 301 YNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKV-RE 359
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + C+ N+ TYN LIG F+ ++++ M + + + S L D +Y++LI+G +
Sbjct: 360 MMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMW 419
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ A ++ M ++G+ + + L + Q M+ L ++D+
Sbjct: 420 EVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK 468
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 139/305 (45%), Gaps = 55/305 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V M+T LI CK + A + M++RG+EPNVVTYNVL+N +C+
Sbjct: 226 PDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCK---------- 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK-LNFMKE--KG---I 115
E ++R A + EM +G+ PDV +++ ++ S L +D+ ++F++E +G +
Sbjct: 276 EGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGV----LEMDEAMSFLEEMIQGDTVV 331
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P V T+ SV+ LC GR+ A ++ M G + TYN + AM
Sbjct: 332 EPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMN 391
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR-------------EIWNHVK----- 217
L ++ L P+ TY+ILI F + +D E+++++
Sbjct: 392 LMDELAISGL-EPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAM 450
Query: 218 ----------------GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
GLD +Y+ +IHG C+ K Q +M+++GL P V
Sbjct: 451 CQQGMMERAMGLFNEMDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAV 510
Query: 262 TFETL 266
T+ L
Sbjct: 511 TYSML 515
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 16/238 (6%)
Query: 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG---IEPDVTSFSIVLHVY 94
+ V+YN +L +CRR H +R A + +M P+ S++ V+
Sbjct: 82 DAVSYNTVLAALCRRGGDH--------LRQARSLLVDMSREAHPAARPNAVSYTTVMRGL 133
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ + ++ L M+ G+ V TY ++++ LC ++ A ELL EM +GV P+
Sbjct: 134 CASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNV 193
Query: 155 ETYNCFFKEY--RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
Y+C + Y GR G K++ M + P++ + LI + ++
Sbjct: 194 VVYSCLLRGYCRSGRWQDVG--KVFEDMSRRGI-KPDVIMFTGLIDDLCKEGKTGKAAKV 250
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + L ++ +Y +LI+ LC++ +EA EM +KG+ P VT+ TL GL
Sbjct: 251 KDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGL 308
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 26/210 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
M N+ Y LI G+ +++++ MA + E+ G+EP+ TY++L+NG + + E+
Sbjct: 367 MCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEK 426
Query: 61 FEKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
F T+R A +F+EM + D ++S ++H
Sbjct: 427 FLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD-KNCGLDAIAYSTMIHGAC 485
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
++ + + M ++G+ P TY+ ++ G +E+AE +L +M +G P
Sbjct: 486 KSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVA 545
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
++ K Y + +KL +M+ ++
Sbjct: 546 VFDSLIKGYSAEGQTDKVLKLIHEMRAKNV 575
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 133/262 (50%), Gaps = 10/262 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P K Y ++ + N + A F EM E+G+ P VV+ N+L+ +C+
Sbjct: 118 PTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKN--------- 168
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+T+ +A ++F EM RG +PD ++ +++ + K + + L+ M+EKG+ P+V +
Sbjct: 169 EETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVS 228
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ LC +++A ELL EM+ NG+ P+ TY+ ++ AM+L M
Sbjct: 229 YTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMV 288
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L +PN+ TY+ LI + EI + ++ L D Y +I GLC +
Sbjct: 289 RRRL-LPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNY 347
Query: 242 KEACQYFVEMIEKGLLPQKVTF 263
+EA + EM G+ P + ++
Sbjct: 348 QEAANFIDEMALGGISPNRASW 369
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 132/276 (47%), Gaps = 18/276 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +LI G CK+ +I A+ L EM E+G+ P+VV+Y L++G+C+ +L
Sbjct: 189 PDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLD----- 243
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ +EM + GIEP+V ++S ++ ++ +++ L M + + P + T
Sbjct: 244 -----EAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVT 298
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ LC G+ +A E+L M G+ P A Y + A +M
Sbjct: 299 YSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMA 358
Query: 182 EDDLCVPNIHTYNILIGMFMAL-----NRMDMVR--EIWNHVKGSELGLDLDSYTMLIHG 234
+ PN ++ + M + N +D R +++ ++ + +++ ++ L+
Sbjct: 359 LGGIS-PNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKC 417
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
C++ +A + EMI G +P + + L GL
Sbjct: 418 FCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGL 453
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 18/255 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YTSLI+G C+ N +D A L EMI G+EPNV TY+ L++G+C+ S H ++
Sbjct: 224 PSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCK--SGHSSQAM 281
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + + M R + P++ ++S +++ + K + +++ L+ M+ +G+ P
Sbjct: 282 E--------LLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGM 333
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR-------GRKDANGAM 174
Y ++ LC+ ++A + EM G+SP+ ++ K + D A
Sbjct: 334 YGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAF 393
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
+LY M+ + V I T++ L+ F ++ I + D + +L+ G
Sbjct: 394 QLYLSMRTRGISV-EIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCG 452
Query: 235 LCEKQKWKEACQYFV 249
L +++K +E + V
Sbjct: 453 LWDRKKVRETTELLV 467
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 2/209 (0%)
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
R AE + + M+ E F + Y R H+P ++ + M++ + PT +Y +V
Sbjct: 67 RPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTV 126
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMKEDD 184
L ++ A EM G+ P+ + N K + + A +L+R+M
Sbjct: 127 FDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRG 186
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
C P+ +TY LI L ++ +E+ + ++ L + SYT LIHGLC+ EA
Sbjct: 187 -CQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEA 245
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ EMI G+ P T+ +L GL +S
Sbjct: 246 IELLEEMIINGIEPNVFTYSSLMDGLCKS 274
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 12/265 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ ++I+ +N+ AE L M + E VT +V L +CR R + +
Sbjct: 53 FGAMIHRLVSVNQFRPAEGMLERMKQEDCE---VTEDVFLT-ICRGYG-----RVHRPL- 102
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A +VF +M ++P S+ V + + + ++ M+EKGI PTV + ++
Sbjct: 103 DAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILI 162
Query: 127 KCLCSCGR-IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
K LC +E A L EM G P + TY + A +L +M+E L
Sbjct: 163 KALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGL 222
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
P++ +Y LI N +D E+ + + + ++ +Y+ L+ GLC+ +A
Sbjct: 223 S-PSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAM 281
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGL 270
+ M+ + LLP VT+ TL GL
Sbjct: 282 ELLEVMVRRRLLPNMVTYSTLINGL 306
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y++LI G CK + A L M +G++P+ Y +++G+C +
Sbjct: 293 LPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAAN 352
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK-------PQLSLDKLNFMKEK 113
F DEM + GI P+ S++ + +++ + P + M+ +
Sbjct: 353 F----------IDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTR 402
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
GI + T+ +VKC C G + A +L EM+ +G P +N
Sbjct: 403 GISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWN 447
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 128/269 (47%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I+G+ K +I A EM+++G P+VVT+N ++N +C+
Sbjct: 114 PDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCK---------- 163
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + NAE + +M G+ P+ +++ ++H YS + + + M +G+ P + +
Sbjct: 164 ARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVS 223
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S + LC GR ++A E+ M G P+ TY Y M + MK
Sbjct: 224 WNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMK 283
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + V N + ILI + MD I + ++G L D+ +Y+ LI LC +
Sbjct: 284 GDGI-VANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRL 342
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+A F +MI G+ P V + +L +G
Sbjct: 343 ADAVDKFNQMIGTGVQPNTVVYHSLIQGF 371
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 144/322 (44%), Gaps = 30/322 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-SLHPNER 60
PN YTS+I+G+ + R + A + EM RG+ P++V++N ++ +C+ S E
Sbjct: 184 PNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEI 243
Query: 61 F------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F E + F+ M+ GI + F+I++ Y++
Sbjct: 244 FYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAK 303
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ L+ M+ +G+ P V TY++++ LC GR+ DA + +M+ GV P+
Sbjct: 304 RGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVV 363
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ + + D A +L +M + + PNI +N ++ R+ I++ V
Sbjct: 364 YHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLV 423
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS--- 273
K D+ + LI G C + +A MI G+ P T+ TL G +S
Sbjct: 424 KDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRI 483
Query: 274 -DMLRTWRRLK-KKLDEESITF 293
D L +R + KK+ ++T+
Sbjct: 484 DDGLNLFREMSDKKIKPTTVTY 505
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 16/288 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y ++ G C+ R ++ F G ++ G++ + N +L +C +R
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLC------CTKRT 59
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFM-KEKGIC-PTV 119
+ ++ + E+ G PD S++IVL ++ Q +LD L M KE+G+C P V
Sbjct: 60 DDAVKVLLRRMTEL---GCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDV 116
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY +V+ G+I A L EM++ G P T+N + + A L RQ
Sbjct: 117 VTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQ 176
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M ++ + PN TY +I + L R + +++ + G L D+ S+ + LC+
Sbjct: 177 MVDNGV-PPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHG 235
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLK 283
+ KEA + F M KG P VT+ L G +DM+ + +K
Sbjct: 236 RSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMK 283
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 10/247 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y++LI C++ R+ A +MI GV+PN V Y+ L+ G C L
Sbjct: 324 PDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDL------ 377
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ E V++ M P++ F+ ++H + + + + +K+ G +
Sbjct: 378 ---VKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIM 434
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C G + A +L M+ G+ P TYN Y + + L+R+M
Sbjct: 435 FNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMS 494
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P TYNI++ R +++ + + G + L +Y +++ GLC
Sbjct: 495 DKKI-KPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCT 553
Query: 242 KEACQYF 248
EA F
Sbjct: 554 DEAIVMF 560
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + S+++ CK R+ A + + G +++ +N L++G C +
Sbjct: 395 PNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMG----- 449
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V D M GI PD +++ +++ Y ++ + L+ M +K I PT T
Sbjct: 450 -----KAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVT 504
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ L GR A+++L EM+ G + S TYN K + A+ +++++
Sbjct: 505 YNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLC 564
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ NI T N +I + R + +++++ + S L + +Y ++I L ++
Sbjct: 565 TMNVKF-NITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSV 623
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+EA F M + G P R L++ + K+D +SI
Sbjct: 624 EEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGKSI 673
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 2/195 (1%)
Query: 77 VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
+R P + ++ +V++ RA +P+L L + G+ +V+KCLC R +
Sbjct: 1 MRVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTD 60
Query: 137 DA-EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM-KEDDLCVPNIHTYN 194
DA + LL M G P A +Y K + A+ L R M KE+ +C P++ TYN
Sbjct: 61 DAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYN 120
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
+I F ++ +++ + D+ ++ +I+ LC+ + A +M++
Sbjct: 121 TVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDN 180
Query: 255 GLLPQKVTFETLYRG 269
G+ P KVT+ ++ G
Sbjct: 181 GVPPNKVTYTSMIHG 195
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 16/277 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + +LI G CK R+D A++ L EM G N+VTYN L+NG+
Sbjct: 87 PDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG-------- 138
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVA 120
R+ E V M+ PD +++ ++H + ++ + + L MK++ C P
Sbjct: 139 ----RSGEAVL-VMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMV-RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY+ ++ LC + A+ELL EM+ R S +N Y +D + A +L
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E C P++ TY+ +I +D + + D+ +YT+L+ GLC+
Sbjct: 254 MLEHG-CAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG 312
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K EAC+ M+E G P VT+ ++ GL + D L
Sbjct: 313 KMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKL 349
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 20/250 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNER 60
P+ + Y ++I+G+CK ID A FL EM +R G P+ TY++L+NG+C+ ++L
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNL----- 208
Query: 61 FEKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
R A+++ EM R V +F+ ++ Y +A + + L+ M E G P V
Sbjct: 209 -----RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDV 263
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY++++ LC CG ++ LL +MV G P TY A +L ++
Sbjct: 264 VTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKR 323
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK- 238
M ED C PN TY+++ ++++DM ++ ++ D+ ++ L+ + ++
Sbjct: 324 MLEDG-CTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSVKKRL 382
Query: 239 ------QKWK 242
QKWK
Sbjct: 383 LDRAAFQKWK 392
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 14/292 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P MY ++ CK ++ A + M + +P+VVT+N L+ G+C+ L
Sbjct: 52 PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLD----- 106
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A++V DEM G ++ +++ +++ S A + S + + M+ P T
Sbjct: 107 -----EAQQVLDEMERSGFAANLVTYNTLINGLSSAGR---SGEAVLVMQGMTTTPDTQT 158
Query: 122 YTSVVKCLCSCGRIEDAEELLGEM-VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C G I+ A L EM R G SP TY+ + A +L ++M
Sbjct: 159 YNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEM 218
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C ++ +N L+ + +D RE+ + + D+ +Y+ +I GLC
Sbjct: 219 IGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGD 278
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ +M+ +G P VT+ L GL ++ + RL K++ E+ T
Sbjct: 279 VDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCT 330
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 17/251 (6%)
Query: 41 TYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHK 99
TY VL+ C L A + EM + G+ P + ++ +H ++ K
Sbjct: 20 TYFVLVRAHCLAGELQA----------AMDLLREMEQQPGMAPTPSMYNFFVHALCKSGK 69
Query: 100 PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC 159
+++ + MK+ P V T+ +++ LC GR+++A+++L EM R+G + + TYN
Sbjct: 70 VPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNT 129
Query: 160 FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG- 218
+ A+ + + M P+ TYN +I F +D +K
Sbjct: 130 LINGLSSAGRSGEAVLVMQGMTT----TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQR 185
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLR 277
+ D +Y++LI+GLC+ ++A + EMI K V F TL G ++ L
Sbjct: 186 AGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLD 245
Query: 278 TWRRLKKKLDE 288
R L + E
Sbjct: 246 RARELLSSMLE 256
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-GICPTVATYTSVVKCLCSCGRIEDAEEL 141
D ++ +++ + A + Q ++D L M+++ G+ PT + Y V LC G++ +A E+
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
+ M P T+N + A ++ +M+ N+ TYN LI
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGF-AANLVTYNTLINGLS 135
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK-GLLPQK 260
+ R E ++G D +Y +IHG C+ + A + EM ++ G P
Sbjct: 136 SAGRSG---EAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKL 286
T+ L GL +S LR L +++
Sbjct: 193 FTYSILINGLCKSSNLRKADELLQEM 218
>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g14770, mitochondrial-like, partial [Cucumis
sativus]
Length = 697
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 139/273 (50%), Gaps = 12/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y++LI G CK+ I+ AE L EM E+ PNV+TY+ L+NG ++ LH
Sbjct: 126 VPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH---- 181
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A KV +M + P++ +++I+L +A ++LD + MK+ G+ V
Sbjct: 182 ------DAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVF 235
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ V + GR+E+AEEL+ +M G+ P Y + + A+ L ++M
Sbjct: 236 ILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEM 295
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ V +I T+N+LI L + D I++ ++ L DL +Y +++G +K
Sbjct: 296 TSKNV-VFDIVTFNVLINCLFKLGKSD-TESIYSAMREMGLSPDLATYNTMLNGNFKKGN 353
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
W A + + EM + L+P +T + GL ++
Sbjct: 354 WTSALELWNEMKSRKLIPNAITCNIMINGLCEA 386
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 12/275 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YT+L+ G+ K ++ A EM + V ++VT+NVL+N + F
Sbjct: 267 PDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL-----------F 315
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + E ++ MR G+ PD+ +++ +L+ + +L+ N MK + + P T
Sbjct: 316 KLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAIT 375
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ LC GR+E+A ++L EMV G+ P++ TY + A+ ++ + +
Sbjct: 376 CNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLV 435
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L V YNILI L + ++ + D +Y LIHG C
Sbjct: 436 NMQLKVDK-DVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHL 494
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K A + M+ + + P T+ L GL ++ ++
Sbjct: 495 KRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLI 529
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLN--GVCRRAS--LH 56
+PN +I G C+ R++ A L EM+ G+ P TY +LLN RRA L
Sbjct: 370 IPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQ 429
Query: 57 PNE-------RFEKTI--------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+E + +K + R A V +M RGI D T+++ ++H Y
Sbjct: 430 THELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYC 489
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + + M + + P + TY ++ L G I +A++LL E+ + G+ P+A
Sbjct: 490 ISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNAC 549
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY + ++ +++Y +M +P YN+LIG F + +M +E+ N
Sbjct: 550 TYETLMCGHCKVRNTKECLRIYCEMVIKGF-IPKPRAYNMLIGYFSKMGKMKQAKELMNE 608
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKW------------KEACQYFVEMIEKGLLPQKVT 262
++ + +Y +LI G C K EA + F+EM ++G +P + T
Sbjct: 609 MQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVPCEST 667
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 145/349 (41%), Gaps = 63/349 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA------- 53
+PNV Y+SLI G+ K + A + L +M+ + PN+ TY +LL+G +
Sbjct: 161 VPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALD 220
Query: 54 ------------------SLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ N + + AE++ +M G++PD+ +++ ++ +
Sbjct: 221 LYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFL 280
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
++ K +L+ M K + + T+ ++ CL G+ D E + M G+SP
Sbjct: 281 KSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLA 339
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI------------------ 197
TYN + + A++L+ +MK L +PN T NI+I
Sbjct: 340 TYNTMLNGNFKKGNWTSALELWNEMKSRKL-IPNAITCNIMINGLCEAGRMENAIDILKE 398
Query: 198 ----GMF-------MALN------RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
G++ + LN R D + + + +L +D D Y +LI LC+
Sbjct: 399 MVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGM 458
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG-LIQSDMLRTWRRLKKKLDE 288
++A +M E+G++ T+ L G I S + R + L E
Sbjct: 459 TRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSE 507
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +++ G K A EM R + PN +T N+++NG+C +
Sbjct: 336 PDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRME----- 390
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA + EM + G+ P T++ I+L++ S++ + L + +
Sbjct: 391 -----NAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDV 445
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G A +L +M G+ TYN Y A Y M
Sbjct: 446 YNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTML 505
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TYN+L+G + ++ + +K L + +Y L+ G C+ +
Sbjct: 506 SERVS-PDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNT 564
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
KE + + EM+ KG +P+ + L
Sbjct: 565 KECLRIYCEMVIKGFIPKPRAYNML 589
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 131/292 (44%), Gaps = 11/292 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + S++YG CK ++ + L EM + G+ N V+Y +LL+ + +
Sbjct: 22 PDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK------- 74
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A M VRG DV + ++++ ++ + + + + + + P T
Sbjct: 75 ---VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYIT 131
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C G I AE L EM P+ TY+ Y + + A K+ R+M
Sbjct: 132 YSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMV 191
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PNI TY IL+ D+ ++++ +K L ++ ++ + +
Sbjct: 192 HKN-AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRM 250
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
+EA + +M GL P V + L G ++S + + L +++ +++ F
Sbjct: 251 EEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVF 302
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 148/304 (48%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P LI G+CK+ R+ A ++ + I G EP+ VT++ +NG+C+
Sbjct: 264 PTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGH------- 316
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A KV M G EPDV ++S V++ + + + +N M + G P T
Sbjct: 317 ---VDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTT 373
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ LC+ ++E+A +L E+ G+SP+ T+N D + A++L+ +MK
Sbjct: 374 FNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMK 433
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P+ TYNILI + ++ ++ ++ S +Y +I GLC++++
Sbjct: 434 SSG-CTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRI 492
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE-----SITFGSE 296
+EA + F +M G+ +TF TL GL ++ + L ++ E ++T+ S
Sbjct: 493 EEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSI 552
Query: 297 FQNY 300
+Y
Sbjct: 553 LTHY 556
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 140/288 (48%), Gaps = 15/288 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + +LI C N+++ A E+ +G+ PNV T+N+L+N +C+ H
Sbjct: 368 LPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHL--- 424
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++F+EM+ G PD +++I++ + K +LD L M+ G +
Sbjct: 425 -------AVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTV 477
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC RIE+AEE+ +M G+ +A T+N + + A +L QM
Sbjct: 478 TYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQM 537
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L PN TYN ++ + + +I + + +D+ +Y LI+GLC+ ++
Sbjct: 538 ISEGL-QPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARR 596
Query: 241 WKEACQYFVEMIEKGLLPQKVTF----ETLYRGLIQSDMLRTWRRLKK 284
+ A + M KG+ P + ++L+RG D L +R + +
Sbjct: 597 TQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTE 644
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 123/269 (45%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+L+ G+ + I+ A R M E G P VT NVL+NG C+
Sbjct: 229 PDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGR------- 281
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A + G EPD +FS ++ + +L L M ++G P V T
Sbjct: 282 ---VGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYT 338
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++V+ CLC+ G +E+A+ ++ +MV +G P T+N A+ L R++
Sbjct: 339 YSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELT 398
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L PN++T+NILI + + ++ +K S D +Y +LI LC K
Sbjct: 399 VKGLS-PNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKL 457
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+A EM G VT+ T+ GL
Sbjct: 458 AKALDLLKEMEVSGCPQSTVTYNTIIDGL 486
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 130/306 (42%), Gaps = 39/306 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
PNV + LI CK+ +A R EM G P+ VTYN+L++ +C L
Sbjct: 404 PNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDL 463
Query: 57 ---------PNERF-----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P + I AE+VFD+M V GI + +F+ ++
Sbjct: 464 LKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCN 523
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + + ++ M +G+ P TY S++ C G I A ++L M NG T
Sbjct: 524 AERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVT 583
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMD---MVREI 212
Y + A+KL R M+ + P YN +I +F N D + RE+
Sbjct: 584 YATLINGLCKARRTQAALKLLRGMRMKGM-KPTPKAYNPVIQSLFRGNNGRDALSLFREM 642
Query: 213 WNHVKGSELGLDLDSYT--MLIHGLCE-KQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+E+G D++T ++ GLC KEA + VEM + G +P+ +F L G
Sbjct: 643 ------TEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEG 696
Query: 270 LIQSDM 275
L+ M
Sbjct: 697 LLNLGM 702
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 122/268 (45%), Gaps = 11/268 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N ++Y L+ + ++I + E EM +G+EP+VVT+N +++ +CR
Sbjct: 160 NTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCR----------A 209
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ R A + +EM + PD T+F+ ++ + + +L M E G PT T
Sbjct: 210 RQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTV 269
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ C GR+ DA + + + +G P T++ F + A+K+ M +
Sbjct: 270 NVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQ 329
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ C P+++TY+ +I ++ + I N + S D ++ LI LC + + +
Sbjct: 330 EG-CEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLE 388
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA E+ KGL P TF L L
Sbjct: 389 EALDLARELTVKGLSPNVYTFNILINAL 416
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 18/287 (6%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ + S I + ++ D A + ++ GV+ N YN LL + +
Sbjct: 125 LGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSK-------- 176
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I+ E + EM +GIEPDV +F+ V+ RA + + ++ L M + P T+
Sbjct: 177 --IKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTF 234
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGR-KDANGAMKLYRQ 179
T++++ G IE A L M G SP++ T N Y GR DA G Y Q
Sbjct: 235 TTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALG----YIQ 290
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ D P+ T++ + +D ++ + D+ +Y+ +I+ LC
Sbjct: 291 QEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNG 350
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ +EA +M++ G LP TF TL L + L L ++L
Sbjct: 351 ELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAREL 397
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 80/191 (41%), Gaps = 2/191 (1%)
Query: 100 PQLSLDKLN--FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
P+ +L LN ++ G+ P+ Y +++ L + G + + L+GEM R G
Sbjct: 69 PEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLV 128
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
F Y + + A L + N YN L+ + +++ ++ + +
Sbjct: 129 QSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMS 188
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+ D+ ++ +I LC ++ + A EM + P + TF TL G ++ +
Sbjct: 189 SQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIE 248
Query: 278 TWRRLKKKLDE 288
RLK ++ E
Sbjct: 249 AALRLKARMSE 259
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 154/345 (44%), Gaps = 61/345 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y++LI +CK+ D A++ L EM ERG N VTYNVL+ G+CR ++ F
Sbjct: 242 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 301
Query: 62 EKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+K + + A+ + DEM ++P+V ++ ++ + R
Sbjct: 302 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 361
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + M G+ P TY ++V+ LC G+++ A LL +MVR+ P T
Sbjct: 362 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 421
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI--------------------- 195
YN + + A +L +M+ + PN++TY+I
Sbjct: 422 YNLIIEGHFRHHSKKDAFRLLSEMENAGIS-PNVYTYSIMIHGLCQSGEPEKASDLLEEM 480
Query: 196 --------------LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
LI + + + EI++ + + DL Y LI GL + +
Sbjct: 481 TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV 540
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+E+ +YF +M E+GLLP + T+ L G +++ L + +L +++
Sbjct: 541 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 585
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 136/299 (45%), Gaps = 16/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+ +I+G C+ + A L EM +G++PN Y L++G CR
Sbjct: 452 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR---------- 501
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A ++FD+M + PD+ ++ ++ S+ + + S M+E+G+ P T
Sbjct: 502 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 561
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ G +E AE+L+ M+ G+ P+ Y + Y D ++ M
Sbjct: 562 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 621
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + N Y ILI + M+ + + ++ + D+ Y+ LI GLC+
Sbjct: 622 DQGVMLDN-RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 680
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGS 295
++A EM +KG+ P V + L GL +S + R L K L +T+ S
Sbjct: 681 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 739
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 143/362 (39%), Gaps = 64/362 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y SLI+G K+ R++ + ++ +M ERG+ PN TY+ L++G + L E+
Sbjct: 521 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ 580
Query: 61 F-------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
I F M +G+ D + I++H S
Sbjct: 581 LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLS 640
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + L+ +++ G P V Y+S++ LC E A +L EM + GV P+
Sbjct: 641 SSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIV 700
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
YN D + A ++ + L VPN TY LI + + ++N
Sbjct: 701 CYNALIDGLCKSGDISYARNVFNSILAKGL-VPNCVTYTSLIDGSCKVGDISNAFYLYNE 759
Query: 216 VKGSELGLD----------------------------------LDSYTMLIHGLCEKQKW 241
+ + + D + S+ L+ G C++ K
Sbjct: 760 MLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKM 819
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
+E + ++ +GL+P +T E + GL ++ L + +L +++ SE H
Sbjct: 820 QETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKT----SESAARH 875
Query: 302 FK 303
F
Sbjct: 876 FS 877
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 12/272 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
M + ++Y LI+ ++ A R L + + G P+V Y+ L++G+C+ A +R
Sbjct: 626 MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTA-----DR 680
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + DEM +G++P++ ++ ++ ++ + + N + KG+ P
Sbjct: 681 -----EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCV 735
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS++ C G I +A L EM+ G++P A Y+ D AM L +M
Sbjct: 736 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 795
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+I ++N L+ F +M ++ + + G L + + +I GL E K
Sbjct: 796 FLRGHA--SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGK 853
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
E FVE+ +K F +L+ +I
Sbjct: 854 LSEVHTIFVELQQKTSESAARHFSSLFMDMIN 885
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 8/296 (2%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNV--LLNGVCRRASLHPN- 58
P + L C + ++A L +MI P VV ++ L+ R+ +
Sbjct: 120 PAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDV 179
Query: 59 --ERFEKT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG 114
+ ++K+ +++A +V MR RG+ P + + +L RA L FM G
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
I P V TY+++++ C + A+++L EM G + TYN A
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 299
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
+ M ED VP+ TY LI R + + + + + +EL ++ Y LI G
Sbjct: 300 GFKKDM-EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 358
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ EA + EM+ G+ P K+T++ L RGL + + L K++ +S
Sbjct: 359 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 125/313 (39%), Gaps = 65/313 (20%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +Y+SLI G CK + A L EM ++GV+PN+V YN L++G+C+
Sbjct: 661 VPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD------ 714
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A VF+ + +G+ P+ +++ ++ + + N M GI P
Sbjct: 715 ----ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 770
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y+ + S G +E A L+ EM G S ++N + R +KL +
Sbjct: 771 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVI 829
Query: 181 KEDDLCVPNIHTY-NILIGM------------FMALNR--------------MDMVRE-- 211
L VPN T NI+ G+ F+ L + MDM+ +
Sbjct: 830 MGRGL-VPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 888
Query: 212 ---------IWNHVKGSELGLDL---------------DSYTMLIHGLCEKQKWKEACQY 247
I +H K L L SY ++ LC K K EA
Sbjct: 889 IPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNL 948
Query: 248 FVEMIEKGLLPQK 260
EM ++G+ P +
Sbjct: 949 LKEMDKRGICPSE 961
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 116/283 (40%), Gaps = 11/283 (3%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
L+ + K R+ A + M +RG+ P++ N LL + R +
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLR----------ADAMALLW 229
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
KV + M GI PDV ++S ++ Y + + + L M+E+G TY ++ L
Sbjct: 230 KVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGL 289
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C G +E+A +M G+ P TY + +N A L +M +L PN
Sbjct: 290 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAEL-KPN 348
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+ Y LI FM D ++ + + + + +Y L+ GLC+ + A
Sbjct: 349 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLK 408
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+M+ P +T+ + G + + RL +++ I+
Sbjct: 409 QMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGIS 451
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 142/306 (46%), Gaps = 16/306 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V Y +LI+G C +D A R EM ++G+ P++ TY +L+NG +
Sbjct: 387 VPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLG------- 439
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A F+EM +G++PD +++ + + ++ M G P V
Sbjct: 440 ---YVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVI 496
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY V LC G E+A +LL MV +G+ P TY + A +++ +M
Sbjct: 497 TYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEM 556
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P++ TY +LI A +D+ ++ + + ++ +Y +I+GLC ++
Sbjct: 557 LSKGV-APSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRR-LKKKLDEESITFGS 295
EA +YF EM EKG+LP K ++ L + LR +R L +K+ +S T
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSV 675
Query: 296 EFQNYH 301
+N H
Sbjct: 676 FLKNLH 681
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 148/353 (41%), Gaps = 65/353 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y +++ +CK R+D A L EM ERG PN VTYNVL+NG+ ++ L +
Sbjct: 213 PTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGL 272
Query: 62 EKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ + N A + +EM R P +++++ ++ Y
Sbjct: 273 IEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLM--YGL 330
Query: 97 AHKPQLSLDKLNF--MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
Q++ +L F M + P + ++ S++ C G I +A L E+ + P+
Sbjct: 331 CKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTV 390
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TYN + A++L ++M + L P+I TY IL+ L + M R +N
Sbjct: 391 ITYNTLIHGLCMWGYLDAALRLKKEMTDQGL-FPDIFTYTILVNGCFKLGYVSMARGFFN 449
Query: 215 HVKGSEL---------------------------------GL--DLDSYTMLIHGLCEKQ 239
+ L G D+ +Y + +H LC++
Sbjct: 450 EMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQG 509
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
++EAC M+ GL+P VT+ ++ G +++ LR R + ++ + +
Sbjct: 510 NFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVA 562
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + SL+YG+C+ I A E+ R + P V+TYN L++G+C L R
Sbjct: 353 PDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRL 412
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K EM +G+ PD+ +++I+++ + ++ N M KG+ P
Sbjct: 413 KK----------EMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFA 462
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + + A + EM+ G P TYN F + + A L M
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D L +P+ TY +I F+ + RE++N + + + +YT+LIH KQ
Sbjct: 523 SDGL-IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQML 581
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A YF +M+EK + +T+ + GL + + + +++E+ I
Sbjct: 582 DLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGI 631
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 126/263 (47%), Gaps = 11/263 (4%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
+MI G+ P+V N +L + R E + A+ V+ M GI+P V +++
Sbjct: 170 KMIRNGLLPDVKNCNRILRVL----------RDENLLSKAKNVYGMMEQFGIKPTVVTYN 219
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
+L Y + + +L+ L+ M+E+G P TY +V L G +E A+ L+ EM+ +
Sbjct: 220 TMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNS 279
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G++ SA TYN + + A L +M + P + TYN L+ ++
Sbjct: 280 GLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMV-NRRAFPTLSTYNTLMYGLCKWVQVTG 338
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
VR ++ + S+ D+ S+ L++G C EA F E+ + L+P +T+ TL
Sbjct: 339 VRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIH 398
Query: 269 GLIQSDMLRTWRRLKKKLDEESI 291
GL L RLKK++ ++ +
Sbjct: 399 GLCMWGYLDAALRLKKEMTDQGL 421
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 119/269 (44%), Gaps = 11/269 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+VK ++ N + A+ G M + G++P VVTYN +L+ C+
Sbjct: 177 LPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCK--------- 227
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A ++ EM+ RG P+ +++++++ S+ + + + + M G+ +
Sbjct: 228 -EGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ C G +A +L+ EMV P+ TYN G + M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P+I ++N L+ + + +++ +K +L + +Y LIHGLC
Sbjct: 347 LKSKF-TPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG 269
A + EM ++GL P T+ L G
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNG 434
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YT LI C + + A R EM++R ++P+ T++V L + R +H +
Sbjct: 632 LPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQC 691
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQL 102
E I+N E D + VR + P +++ ++R+ P L
Sbjct: 692 VESLIQNVE---DNINVRLLRPRK---NVMEENFARSQSPML 727
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 16/277 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + +LI G CK R+D A++ L EM G N+VTYN L+NG+
Sbjct: 87 PDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG-------- 138
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVA 120
R+ E V M+ PD +++ ++H + ++ + + L MK++ C P
Sbjct: 139 ----RSGEAVL-VMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMV-RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY+ ++ LC + A+ELL EM+ R S +N Y +D + A +L
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E C P++ TY+ +I +D + + D+ +YT+L+ GLC+
Sbjct: 254 MLEHG-CAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG 312
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K EAC+ M+E G P VT+ ++ GL + D L
Sbjct: 313 KMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKL 349
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 20/250 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNER 60
P+ + Y ++I+G+CK ID A FL EM +R G P+ TY++L+NG+C+ ++L
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNL----- 208
Query: 61 FEKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
R A+++ EM R V +F+ ++ Y +A + + L+ M E G P V
Sbjct: 209 -----RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDV 263
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY++++ LC CG ++ LL +MV G P TY A +L ++
Sbjct: 264 VTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKR 323
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK- 238
M ED C PN TY+++ ++++DM ++ ++ D+ ++ L+ + ++
Sbjct: 324 MLEDG-CTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVKKRL 382
Query: 239 ------QKWK 242
QKWK
Sbjct: 383 LDRAAFQKWK 392
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 14/292 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P MY ++ CK ++ A + M + +P+VVT+N L+ G+C+ L
Sbjct: 52 PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLD----- 106
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A++V DEM G ++ +++ +++ S A + S + + M+ P T
Sbjct: 107 -----EAQQVLDEMERSGFAANLVTYNTLINGLSSAGR---SGEAVLVMQGMTTTPDTQT 158
Query: 122 YTSVVKCLCSCGRIEDAEELLGEM-VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C G I+ A L EM R G SP TY+ + A +L ++M
Sbjct: 159 YNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEM 218
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C ++ +N L+ + +D RE+ + + D+ +Y+ +I GLC
Sbjct: 219 IGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGD 278
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ +M+ +G P VT+ L GL ++ + RL K++ E+ T
Sbjct: 279 VDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCT 330
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 17/251 (6%)
Query: 41 TYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHK 99
TY VL+ C L A + EM + G+ P + ++ +H ++ K
Sbjct: 20 TYFVLVRAHCLAGELQA----------AMDLLREMEQQPGMAPTPSMYNFFVHALCKSGK 69
Query: 100 PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC 159
+++ + MK+ P V T+ +++ LC GR+++A+++L EM R+G + + TYN
Sbjct: 70 VPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNT 129
Query: 160 FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG- 218
+ A+ + + M P+ TYN +I F +D +K
Sbjct: 130 LINGLSSAGRSGEAVLVMQGMTT----TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQR 185
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLR 277
+ D +Y++LI+GLC+ ++A + EMI K V F TL G ++ L
Sbjct: 186 AGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLD 245
Query: 278 TWRRLKKKLDE 288
R L + E
Sbjct: 246 RARELLSSMLE 256
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-GICPTVATYTSVVKCLCSCGRIEDAEEL 141
D ++ +++ + A + Q ++D L M+++ G+ PT + Y V LC G++ +A E+
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
+ M P T+N + A ++ +M+ N+ TYN LI
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGF-AANLVTYNTLINGLS 135
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK-GLLPQK 260
+ R E ++G D +Y +IHG C+ + A + EM ++ G P
Sbjct: 136 SAGRSG---EAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKL 286
T+ L GL +S LR L +++
Sbjct: 193 FTYSILINGLCKSSNLRKADELLQEM 218
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 130/273 (47%), Gaps = 11/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + L+ +CK R+ A+ L M+++G++P++VTYN L++G C
Sbjct: 278 PDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYC----------L 327
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+ + + M RG+ V S++IV++ + + ++ M K I P V T
Sbjct: 328 VNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVIT 387
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GRI A EL+ M G P TY+ + A+ L ++K
Sbjct: 388 YNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLK 447
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN++TY ILI R++ R I+ + L +++YT++I G C +
Sbjct: 448 DQGI-RPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLF 506
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA +M + +P +T+E + L D
Sbjct: 507 DEALSLLSKMKDNSCIPDAITYEIIICSLFDKD 539
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 141/286 (49%), Gaps = 15/286 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V MY+++I CK ++ A EM+ R + N+VTY+ L++G C L
Sbjct: 209 DVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKL------- 261
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++A +F++M I PDV +F+I++ + + + + + + L M ++GI P + TY
Sbjct: 262 ---KDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTY 318
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S++ C + A+ +L M GV+ + +YN + K + AMKL+++M
Sbjct: 319 NSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHH 378
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWN--HVKGSELGLDLDSYTMLIHGLCEKQK 240
+ PN+ TYN LI R+ E+ + H +G + D+ +Y+ ++ LC+
Sbjct: 379 KQI-FPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQ--PDIITYSSILDALCKNHL 435
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A +++ ++G+ P T+ L GL + L R + + L
Sbjct: 436 VDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDL 481
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 132/307 (42%), Gaps = 46/307 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + LI +C++ I A L ++++ G EP+ +T N + G C + +H F
Sbjct: 103 PNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNF 162
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
D++ G D S+ +++ + + + +L+ L + K + V
Sbjct: 163 H----------DKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVM 212
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ +C + DA +L EMV +S + TY+ + A+ L+ +M
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMT 272
Query: 182 EDDLCVPNIHTYNILIGMFMA-----------------------------------LNRM 206
+++ P+++T+NIL+ F +N +
Sbjct: 273 SENI-NPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEV 331
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+M + I N + + + SY ++I+G C+ + +A + F EM K + P +T+ +L
Sbjct: 332 NMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSL 391
Query: 267 YRGLIQS 273
GL +S
Sbjct: 392 IDGLCKS 398
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 45/212 (21%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
V+ Y +I G+CKI +D A + EM + + PNV+TYN L++G+C+
Sbjct: 350 VRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGR--------- 400
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP------ 117
I A ++ D M RG +PD+ ++S +L + H ++ L +K++GI P
Sbjct: 401 -ISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYT 459
Query: 118 -----------------------------TVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
TV TYT +++ CS G ++A LL +M N
Sbjct: 460 ILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDN 519
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
P A TY + + + A KL R+M
Sbjct: 520 SCIPDAITYEIIICSLFDKDENDKAEKLLREM 551
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 126/272 (46%), Gaps = 19/272 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y+S++ CK + +D A L ++ ++G+ PN+ TY +L++G+C+ L
Sbjct: 418 PDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRL------ 471
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A +F+++ V+G V ++++++ + +L L+ MK+ P T
Sbjct: 472 ----EDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAIT 527
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF---FKEYRGRKDANGAMKLYR 178
Y ++ L + AE+LL EM+ G+ S Y + F N +++
Sbjct: 528 YEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTS 587
Query: 179 QMKEDD---LCVPNIHTYNILIGMFMALNRMDMVRE-IWNHVKGSELG--LDLDSYTMLI 232
+ + L + I+ +L M ++ I++ S+ G LD+++YT++I
Sbjct: 588 SQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMI 647
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
G C + E+ +M G +P VT++
Sbjct: 648 QGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEK---------VFDEMRVRGIEPDVTSFS 88
+VV L N + R+ P+ F + + + K +F +M RGI+P+ +F+
Sbjct: 50 DVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFN 109
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR- 147
I+++ + + + L + + G P T + +K C G+I A ++V
Sbjct: 110 ILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVAL 169
Query: 148 -------------NGVSPSAET---------------------YNCFFKEYRGRKDANGA 173
NG+ ET Y+ K+ N A
Sbjct: 170 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDA 229
Query: 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
LY +M + NI TY+ LI F + ++ ++N + + D+ ++ +L+
Sbjct: 230 FDLYSEMVSRRIS-SNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 288
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
C++ + KEA M+++G+ P VT+ +L G
Sbjct: 289 AFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDG 324
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 93/227 (40%), Gaps = 1/227 (0%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ +A +F+ + + P F +L ++ L M+ +GI P +
Sbjct: 51 VVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNI 110
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ C C G I A +L ++++ G P T N F K + + + A+ + ++
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALG 170
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
+ + +Y LI + E+ V G + LD+ Y+ +I +C+ + +A
Sbjct: 171 FHLDQV-SYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDA 229
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ EM+ + + VT+ L G L+ L K+ E+I
Sbjct: 230 FDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENI 276
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 141/293 (48%), Gaps = 15/293 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +LI G C +++ A + M+E G +PNVVTYN ++NG+C+
Sbjct: 133 PDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSL---- 188
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +M R ++ DV ++S ++ R ++ M+ KGI ++ T
Sbjct: 189 ------ALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVT 242
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+V LC G+ D +LL +M + P+ T+N + A +LY++M
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMI 302
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN TYN L+ + NR+ + + + + D+ ++T LI G C+ ++
Sbjct: 303 TKGIS-PNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRV 361
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
E + F ++ ++GL+ VT+ L +G QS L + ++L +E ++ G
Sbjct: 362 DEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKL----EIAEELFQEMVSLG 410
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 149/322 (46%), Gaps = 44/322 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V Y+++I C+ ID A EM +G++ ++VTYN L+ G+C+ +
Sbjct: 203 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWN----- 257
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ ++ +M R I P+V +F++++ V+ + K Q + + M KGI P T
Sbjct: 258 -----DGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTIT 312
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C R+ +A +L MVRN SP T+ K Y K + MKL+R++
Sbjct: 313 YNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKIS 372
Query: 182 EDDLC----------------------------------VPNIHTYNILIGMFMALNRMD 207
+ L +P++ TY IL+ +++
Sbjct: 373 KRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLE 432
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
EI+ ++ S++ LD+ YT++I G+C+ K ++A F + KG+ P +T+ +
Sbjct: 433 KALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 492
Query: 268 RGLIQSDMLRTWRRLKKKLDEE 289
GL + L L +K++E+
Sbjct: 493 SGLCKKGSLSEANILLRKMEED 514
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 142/303 (46%), Gaps = 16/303 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ +I +C+ + A LG++++ G EP+ T+N L+NG+C E
Sbjct: 99 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLC----------LE 148
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A + M G +P+V +++ +++ ++ L+LD L M E+ + V TY
Sbjct: 149 SKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTY 208
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++++ LC G I+ A L EM G+ S TYN N ++L + M
Sbjct: 209 STIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTS 268
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ +PN+ T+N+LI +F+ ++ E++ + + + +Y L+ G C + +
Sbjct: 269 RKI-IPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLS 327
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK-LDEESITFGSEF 297
EA M+ P VTF +L +G + + ++ +R++ K+ L ++T+
Sbjct: 328 EANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILV 387
Query: 298 QNY 300
Q +
Sbjct: 388 QGF 390
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 11/240 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +TSLI G+CK+ R+D + ++ +RG+ N VTY++L+ G C+ L
Sbjct: 343 PDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEI---- 398
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE++F EM G+ PDV ++ I+L K + +L+ +++ + +
Sbjct: 399 ------AEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVM 452
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ +C G++EDA L + GV P+ TY + + A L R+M+
Sbjct: 453 YTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 512
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
ED PN TYN LI + + ++ +K D S M+I L W
Sbjct: 513 EDG-NEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSAVWW 571
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 122/285 (42%), Gaps = 16/285 (5%)
Query: 21 DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80
D A EMI P++V ++ +GV + F K +M + GI
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCK----------KMELNGI 96
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
++ + +I+++ + R K + L + + G P T+ +++ LC ++ +A
Sbjct: 97 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVV 156
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
L+ MV NG P+ TYN D + A+ L R+M E ++ ++ TY+ +I
Sbjct: 157 LVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNV-KADVFTYSTIIDSL 215
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+D ++ ++ + L +Y L+ GLC+ KW + Q +M + ++P
Sbjct: 216 CRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNV 275
Query: 261 VTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNY 300
+TF L ++ L+ L K + +IT+ S Y
Sbjct: 276 ITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGY 320
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 135/274 (49%), Gaps = 15/274 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YTSLI K R+D+A + L +M++ PNVVTY +++G+CR + +E+
Sbjct: 511 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR---IGESEK 567
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+ M +G P+V +++ ++ +A K LSLD M KG P
Sbjct: 568 -------ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 620
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC+ G ++ A LLGEM + + Y C + + K ++ + +M
Sbjct: 621 TYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEM 678
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK--GSELGLDLDSYTMLIHGLCEK 238
E VP Y +LI F R+++ E+ + S + D D Y LI LC
Sbjct: 679 -ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLA 737
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ +EA + + EM +G +P+ F L +GL++
Sbjct: 738 SQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVE 771
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 135/291 (46%), Gaps = 15/291 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-ER 60
P V YT+LI+ + K ++ A M++ G PN VTY L++G+C+ ++ E
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415
Query: 61 FEKTIRNAEKVFDEMRV-----RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
+ K I ++ + + P+V ++ ++ +AHK + + L+ M G
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF----FKEYRGRKDAN 171
P Y +++ C G+I+ A+E+ +M + G PS TY FK+ GR D
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKD--GRLDL- 532
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
AMK+ QM +D C PN+ TY +I + + ++ + ++ ++ +YT L
Sbjct: 533 -AMKVLSQMLKDS-CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 590
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
I GL + K + F +M KG P VT+ L L + +L R L
Sbjct: 591 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 641
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 13/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +L+ G CK +++D A L M+ G EPN + Y+ L++G C+
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK------- 494
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I +A++VF +M G P V +++ ++ + + L++ L+ M + P V T
Sbjct: 495 ---IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 551
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC G E A +LL M G SP+ TY + ++ L+ QM
Sbjct: 552 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 611
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN TY +LI A +D R + +K + L Y I G + +
Sbjct: 612 RKG-CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSF 668
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ EM G +P + L ++ L L K++ E
Sbjct: 669 IASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 30/292 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+ +I C +++ A EM GV P+V TY +L++ C+
Sbjct: 285 VPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG------- 337
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A+ +F+EMR G P V +++ ++H Y +A + + D + M + G P
Sbjct: 338 ---LIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 394
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V LC G I A E+ +++ G S SA++ Y
Sbjct: 395 TYGALVDGLCKAGNISKAFEVYAKLI--GTSDSADS------------------DFYFPC 434
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ PN+ TY L+ +++D E+ + + S + Y LI G C+ K
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + F++M + G LP T+ +L + + L ++ ++ ++S T
Sbjct: 495 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCT 546
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 120/323 (37%), Gaps = 56/323 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN ++ SL++ +C A + L M G P V YN+ + +C + L +
Sbjct: 175 PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLL 234
Query: 62 EKTIRNAEKVFDEMRV-----------------------------------RGIEPDVTS 86
+ AEK++ EM +G PD ++
Sbjct: 235 DL----AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTST 290
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
+S V+ A K + + MK G+ P V TYT ++ C G IE A+ L EM
Sbjct: 291 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 350
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G SP+ TY Y K A ++ +M D C PN TY L+ +
Sbjct: 351 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGALVDGLCKAGNI 409
Query: 207 DMVREIWNHVKGSELGLDLD----------------SYTMLIHGLCEKQKWKEACQYFVE 250
E++ + G+ D D +Y L+ GLC+ K A +
Sbjct: 410 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDA 469
Query: 251 MIEKGLLPQKVTFETLYRGLIQS 273
M+ G P + ++ L G ++
Sbjct: 470 MLSSGCEPNHIVYDALIDGFCKA 492
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 131/305 (42%), Gaps = 21/305 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +L+ G+ K ++ +R + M+ G PN +N L++ C
Sbjct: 139 IPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCN--------- 189
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK A K+ + M G P ++I + S + +L L + EK +A
Sbjct: 190 -EKDYAYAYKLLNRMTTCGCPPGYVVYNIFIG--SICGQEKLPSPDLLDLAEKIYGEMLA 246
Query: 121 T--------YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
+ +CLC G+ + A +L+ EM+R G P TY+
Sbjct: 247 ANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEK 306
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A L+++MK + P+++TY ILI F ++ + ++ ++ + +YT LI
Sbjct: 307 AFLLFQEMKMVGV-TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 365
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
H + ++ +A F M++ G P VT+ L GL ++ + + KL S +
Sbjct: 366 HAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS 425
Query: 293 FGSEF 297
S+F
Sbjct: 426 ADSDF 430
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 102/269 (37%), Gaps = 20/269 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +L+ ++D+ R EM E G + T + +C+
Sbjct: 38 PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEG-------- 89
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R A+ + D + + D + ++ A ++ L+ M+ P V T
Sbjct: 90 ----RWADAL-DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ ++ + ++ M+ G +P+ +N Y KD A KL +M
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204
Query: 182 EDDLCVPNIHTYNILIGMFMALNR------MDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
C P YNI IG + +D+ +I+ + + L+ + L
Sbjct: 205 TCG-CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCL 263
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
C K+ +A Q EM+ KG +P T+
Sbjct: 264 CGVGKFDKAFQLIKEMMRKGFVPDTSTYS 292
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 76/199 (38%), Gaps = 20/199 (10%)
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
D ++ G P +++ ++ V S A + L M E G C T LC
Sbjct: 29 DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88
Query: 133 GRIEDAEELLGE--------MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
GR DA +++ + + +S E +F E AM +M+ +
Sbjct: 89 GRWADALDMIEREDFKLDTVLCTHMISGLMEAS--YFDE---------AMSFLHRMRCNS 137
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
C+PN+ TY L+ F+ ++ + I N + + + L+H C ++ + A
Sbjct: 138 -CIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYA 196
Query: 245 CQYFVEMIEKGLLPQKVTF 263
+ M G P V +
Sbjct: 197 YKLLNRMTTCGCPPGYVVY 215
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 11/290 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +Y ++ G K NR+D A + + M + + P++ TY LL+G+ + L
Sbjct: 700 VPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLE---- 755
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +F +M G EPDV +++ ++ V + K +L M +K P V
Sbjct: 756 ------EAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVV 809
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+S++ L GR+E+A + G +P+ Y+ + + + A++L+ +M
Sbjct: 810 TYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEM 869
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C PNI TYN L+ R+++ ++ ++ DL +Y +LI G+ +
Sbjct: 870 QRRQ-CPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGM 928
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
EA YF M EKG++P +TF +L L + D L L ++EE
Sbjct: 929 VDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEG 978
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 134/283 (47%), Gaps = 15/283 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +L+ + +D A + L M + P VVTY L++G+ + L
Sbjct: 531 YNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLD---------- 580
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + EM +G EP V ++S ++ + + + + SL + M KG V+TY+ V+
Sbjct: 581 EAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVI 640
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
CLC ++ A ++ G M G+ P Y + + A++++ +++E L
Sbjct: 641 NCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSL- 699
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VP+ YNI++ + NR+D ++ + +K + DL +YT L+ GL + + +EA
Sbjct: 700 VPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFN 759
Query: 247 YFVEMIEKGLLPQKVTFETLY----RGLIQSDMLRTWRRLKKK 285
F +M E+G P V + +L +G S L +R + KK
Sbjct: 760 MFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKK 802
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 132/270 (48%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V YT+L+ G K R+D A L EM ++G EP+VVTY+ L+ AS + ++
Sbjct: 560 IPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLM------ASFYKRDQ 613
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+++ +FDEM +G DV+++S+V++ ++ +LD MKE+G+ P +
Sbjct: 614 EEESL----SLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLG 669
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ L +I+ A ++ E+ + + P YN + A KL M
Sbjct: 670 NYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM 729
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K ++ +P++ TY L+ R++ ++ + D+ +YT L+ L + K
Sbjct: 730 KNQNI-LPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGK 788
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A F M +K +P VT+ +L L
Sbjct: 789 LSHALIIFRAMAKKRCVPDVVTYSSLIDSL 818
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 137/312 (43%), Gaps = 22/312 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+PN++ Y +I K R A + ++ E+G P+V TYN L++ + + +
Sbjct: 424 VPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLA 483
Query: 56 ----------------HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK 99
N E TI A++ + + +++ ++ +
Sbjct: 484 IIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGH 543
Query: 100 PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC 159
++ L MK+ PTV TYT++V L GR+++A LL EM + G PS TY+
Sbjct: 544 VDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSS 603
Query: 160 FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
+ R ++ L+ +M CV ++ TY+++I + +D +++ +K
Sbjct: 604 LMASFYKRDQEEESLSLFDEMVRKG-CVADVSTYSLVINCLCKSDDVDQALDVFGRMKEE 662
Query: 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 279
+ L +Y L+ L + +K A Q F E+ E L+P + + GL++S+ +
Sbjct: 663 GMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEA 722
Query: 280 RRLKKKLDEESI 291
+L + ++I
Sbjct: 723 CKLVDSMKNQNI 734
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 11/254 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ MY ++ K A G++ + ++P+ T+ + ++ R L P
Sbjct: 250 PSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDP---- 305
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + EM GI+P V +F++++ ++ + N MK P V T
Sbjct: 306 ------AAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVT 359
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++V L GR+E+A E+ EM N SP A YN +A+ A L+++MK
Sbjct: 360 YTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMK 419
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L VPN+ TYNI+I + R ++++ +K D+ +Y LI L + +
Sbjct: 420 DRGL-VPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQM 478
Query: 242 KEACQYFVEMIEKG 255
+ EM+EKG
Sbjct: 479 DKVLAIIKEMVEKG 492
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y+SLI + K +D A EM R PN+VTYN LL+G+ + L+
Sbjct: 841 PNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNV---- 896
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AEK+ +EM G PD+ +++I++ + + MKEKGI P V T
Sbjct: 897 ------AEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVIT 950
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+TS+++ L ++ +A EL M G +PS TYN + A ++ +MK
Sbjct: 951 FTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMK 1010
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
C+P+ I IG+ + R+ VRE H
Sbjct: 1011 VKG-CMPD----GITIGI---MKRILSVREQQFHA 1037
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 119/264 (45%), Gaps = 11/264 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++ + TSL+ + N + A +M G P+ YN +L + + H
Sbjct: 216 SMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYH------ 269
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A VF ++ I+PD +F I +H ++R+ + + + + M + GI P V T+
Sbjct: 270 ----SAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTF 325
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++ L G I++A + M SP+ TY A +++ +MKE
Sbjct: 326 TVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKE 385
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
++ C P+ YN LI DM ++ +K L +L +Y ++I L + +
Sbjct: 386 NN-CSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQP 444
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
EA Q F ++ E+G +P T+ TL
Sbjct: 445 EAWQLFHDLKEQGAVPDVFTYNTL 468
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+L + + +L+ N MK G P+ Y V++ L G A + G++ +
Sbjct: 223 LLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFR 282
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
+ P A+T+ F + + A + ++M + + P +HT+ +LI + +D
Sbjct: 283 IQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGID-PGVHTFTVLIDALVKSGNIDEA 341
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ +N +K ++ +YT L++GL + + +EAC+ FVEM E P + + TL G
Sbjct: 342 CKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDG 401
Query: 270 L 270
L
Sbjct: 402 L 402
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 88/198 (44%), Gaps = 1/198 (0%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G V ++++++ + A + + L M ++G ++ TS+++ S + A
Sbjct: 177 GYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGA 236
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
E+ +M G +PS YN + + A+ ++ ++ + + P+ T+ I +
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRI-QPDAQTFRIFVH 295
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
F R+D E + S + + ++T+LI L + EAC++F M P
Sbjct: 296 SFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSP 355
Query: 259 QKVTFETLYRGLIQSDML 276
VT+ TL GL ++ L
Sbjct: 356 NVVTYTTLVNGLAKAGRL 373
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 1/163 (0%)
Query: 111 KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
++ G TV TYT ++K L + ++L M + G S + + +
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNV 233
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
+GA++++ QMK C P+ + YN ++ + + ++ + + D ++ +
Sbjct: 234 SGALEIFNQMKSFG-CNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRI 292
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+H + A + EMI+ G+ P TF L L++S
Sbjct: 293 FVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKS 335
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +TSLI K++++ A M E G P+VVTYNVL++ + R +H
Sbjct: 945 VPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVH---- 1000
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
A +F EM+V+G PD + I+ + S
Sbjct: 1001 ------EAAMIFHEMKVKGCMPDGITIGIMKRILS 1029
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 138/284 (48%), Gaps = 11/284 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V + +L+ G C+ R+ AE + M+E G +PN VTY ++NG+C+
Sbjct: 9 DVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD-------- 60
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A + +M I+ DV ++ ++ + + + M +KGI P V TY
Sbjct: 61 --TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTY 118
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ CS G+ DAE+LL +M+ + V P T+N + + A +LYR+M
Sbjct: 119 NCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLG 178
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
++ P+ TYN LI F +R+D + I++ + ++ + LI G C ++
Sbjct: 179 RNI-FPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVD 237
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ + EM+ +GL+P V++ TL G Q+ L + L +++
Sbjct: 238 DGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +I G C + AE+ L +MIE V+P+VVT+N L+N +
Sbjct: 113 PNVLTYNCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVK---------- 162
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I AE+++ EM R I PD +++ ++ + + + + + M KG P V T
Sbjct: 163 EGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVIT 222
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+++ C R++D +LL EM+R G+ P + +YN + D N A L+++M
Sbjct: 223 INTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + +LI + K +I AE EM+ R + P+ +TYN L++G C+ + L
Sbjct: 148 PDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLD----- 202
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A+ +FD M +G P+V + + ++ RA + + L+ M +G+ P +
Sbjct: 203 -----DAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVS 257
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMV 146
Y +++ C G + A++L EM+
Sbjct: 258 YNTLIHGFCQAGDLNAAQDLFQEMI 282
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 98/275 (35%), Gaps = 81/275 (29%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M+E+G + +VV +N L+NG+CR E + AE + D
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCR----------EGRVLEAEALVDR--------------- 35
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED------------ 137
M E G P TY ++V +C G +
Sbjct: 36 --------------------MVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRKMDESH 75
Query: 138 -----------------------AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
A+ L EM G+ P+ TYNC A
Sbjct: 76 IKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAE 135
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
+L R M E ++ P++ T+N LI F+ ++ E++ + G + D +Y LI G
Sbjct: 136 QLLRDMIESNV-DPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDG 194
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
C+ + +A F M+ KG P +T TL G
Sbjct: 195 FCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGG 229
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 6/196 (3%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M EKG V + +++ LC GR+ +AE L+ MV NG P+ TY D
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
+ A+ L R+M E + ++ Y +I + ++ + + ++ +Y
Sbjct: 61 TDSALNLLRKMDESHI-KADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYN 119
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRR-LKK 284
+I G C KW +A Q +MIE + P VTF L ++ S+ +R L +
Sbjct: 120 CMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGR 179
Query: 285 KLDEESITFGSEFQNY 300
+ ++IT+ S +
Sbjct: 180 NIFPDTITYNSLIDGF 195
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 14/256 (5%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G EP + +YN LLN K E +F G+ P++ ++++++ +
Sbjct: 109 GCEPAIRSYNTLLNAFVE----------AKQWVKVESLFAYFETAGVAPNLQTYNVLIKM 158
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ + + + L++M ++G P V +Y++V+ L G+++DA EL EM GV+P
Sbjct: 159 SCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPD 218
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
YN + KD AM+L+ ++ ED PN+ T+NI+I R+D +IW
Sbjct: 219 VTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIW 278
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ- 272
+K +E DL +Y+ LIHGLC+ +A F E+ E+ VT+ T+ G +
Sbjct: 279 ERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRC 338
Query: 273 ---SDMLRTWRRLKKK 285
+ L WR ++ K
Sbjct: 339 GKIKESLELWRIMEHK 354
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 131/272 (48%), Gaps = 17/272 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ Y LI CK + A FL M + G +P+V +Y+ ++N + + L
Sbjct: 147 PNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLD----- 201
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY--SRAHKPQLSL-DKLNFMKEKGICPT 118
+A ++FDEM RG+ PDVT ++I++ + + HK + L D+L +++ + P
Sbjct: 202 -----DALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL--LEDSSVYPN 254
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V T+ ++ L CGR++D ++ M +N TY+ + + A ++
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
++ E + ++ TYN ++G F ++ E+W + + +++ SY +LI GL E
Sbjct: 315 ELDERKASI-DVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLEN 372
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
K EA + M KG K T+ GL
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGL 404
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 125/325 (38%), Gaps = 60/325 (18%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+SLI+G C +D AE E+ ER +VVTYN +L G CR + + + +
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME 352
Query: 67 NAEKV-----------------FDE-------MRVRGIEPDVTSFSIVLHVYSRAHKPQL 102
+ V DE M +G D T++ I +H
Sbjct: 353 HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNK 412
Query: 103 SLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
+L + ++ G V Y S++ CLC R+E+A L+ EM ++GV ++ N
Sbjct: 413 ALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Query: 163 EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI------GMFMALN------------ 204
A R+M ++ C P + +YNILI G F +
Sbjct: 473 GLIRDSRLGEASFFLREMGKNG-CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWK 531
Query: 205 -----------------RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
++D+ E+W+ S L D+ + +LIHGLC K +A
Sbjct: 532 PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTV 591
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQ 272
M + VT+ TL G +
Sbjct: 592 MANMEHRNCTANLVTYNTLMEGFFK 616
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 129/299 (43%), Gaps = 13/299 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I K ++D A EM ERGV P+V YN+L++G +
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK---------- 231
Query: 62 EKTIRNAEKVFDE-MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK + A +++D + + P+V + +I++ S+ + L MK+ +
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+S++ LC G ++ AE + E+ S TYN + +++L+R M
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + NI +YNILI + ++D IW + D +Y + IHGLC
Sbjct: 352 EHKN--SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGY 409
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+A E+ G + ++ L + L L K++ + + S N
Sbjct: 410 VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 114/270 (42%), Gaps = 46/270 (17%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + +LI G + +R+ A FL EM + G P VV+YN+L+ G+C+ F
Sbjct: 463 NSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFV 522
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K EM G +PD+ ++SI+L R K L+L+ + + G+ V +
Sbjct: 523 K----------EMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ LCS G+++DA ++ M E+R
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANM-----------------EHRN---------------- 599
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C N+ TYN L+ F + + IW ++ L D+ SY ++ GLC +
Sbjct: 600 ---CTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVS 656
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
A ++F + G+ P T+ L R ++
Sbjct: 657 YAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y LI G CK + A F+ EM+E G +P++ TY++LL G+CR
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR---------- 546
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ I A +++ + G+E DV +I++H K ++ + M+ + + T
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ G A + G M + G+ P +YN K + + AM+ + +
Sbjct: 607 YNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDAR 666
Query: 182 EDDLCVPNIHTYNILI 197
+ P ++T+NIL+
Sbjct: 667 NHGI-FPTVYTWNILV 681
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 65/132 (49%)
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
K Y + A+ ++++M+E C P I +YN L+ F+ + V ++ + + +
Sbjct: 85 IKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAG 144
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR 280
+ +L +Y +LI C+K+++++A + M ++G P ++ T+ L ++ L
Sbjct: 145 VAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDAL 204
Query: 281 RLKKKLDEESIT 292
L ++ E +
Sbjct: 205 ELFDEMSERGVA 216
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 135/274 (49%), Gaps = 15/274 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YTSLI K R+D+A + L +M++ PNVVTY +++G+CR + +E+
Sbjct: 511 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR---IGESEK 567
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+ M +G P+V +++ ++ +A K LSLD M KG P
Sbjct: 568 -------ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 620
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC+ G ++ A LLGEM + + Y C + + K ++ + +M
Sbjct: 621 TYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEM 678
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK--GSELGLDLDSYTMLIHGLCEK 238
E VP Y +LI F R+++ E+ + S + D D Y LI LC
Sbjct: 679 -ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLA 737
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ +EA + + EM +G +P+ F L +GL++
Sbjct: 738 SQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVE 771
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 135/291 (46%), Gaps = 15/291 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-ER 60
P V YT+LI+ + K ++ A M++ G PN VTY L++G+C+ ++ E
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415
Query: 61 FEKTIRNAEKVFDEMRV-----RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
+ K I ++ + + P+V ++ ++ +AHK + + L+ M G
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF----FKEYRGRKDAN 171
P Y +++ C G+I+ A+E+ +M + G PS TY FK+ GR D
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKD--GRLDL- 532
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
AMK+ QM +D C PN+ TY +I + + ++ + ++ ++ +YT L
Sbjct: 533 -AMKVLSQMLKDS-CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 590
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
I GL + K + F +M KG P VT+ L L + +L R L
Sbjct: 591 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 641
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 13/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +L+ G CK +++D A L M+ G EPN + Y+ L++G C+
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK------- 494
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I +A++VF +M G P V +++ ++ + + L++ L+ M + P V T
Sbjct: 495 ---IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 551
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC G E A +LL M G SP+ TY + ++ L+ QM
Sbjct: 552 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 611
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN TY +LI A +D R + +K + L Y I G + +
Sbjct: 612 RKG-CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSF 668
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ EM G +P + L ++ L L K++ E
Sbjct: 669 IASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 30/292 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+ +I C +++ A EM GV P+V TY +L++ C+
Sbjct: 285 VPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG------- 337
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A+ +F+EMR G P V +++ ++H Y +A + + D + M + G P
Sbjct: 338 ---LIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 394
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V LC G I A E+ +++ G S SA++ Y
Sbjct: 395 TYGALVDGLCKAGNISKAFEVYAKLI--GTSDSADS------------------DFYFPC 434
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ PN+ TY L+ +++D E+ + + S + Y LI G C+ K
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + F++M + G LP T+ +L + + L ++ ++ ++S T
Sbjct: 495 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCT 546
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 120/323 (37%), Gaps = 56/323 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN ++ SL++ +C A + L M G P V YN+ + +C + L +
Sbjct: 175 PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLL 234
Query: 62 EKTIRNAEKVFDEMRV-----------------------------------RGIEPDVTS 86
+ AEK++ EM +G PD ++
Sbjct: 235 DL----AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTST 290
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
+S V+ A K + + MK G+ P V TYT ++ C G IE A+ L EM
Sbjct: 291 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 350
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G SP+ TY Y K A ++ +M D C PN TY L+ +
Sbjct: 351 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGALVDGLCKAGNI 409
Query: 207 DMVREIWNHVKGSELGLDLD----------------SYTMLIHGLCEKQKWKEACQYFVE 250
E++ + G+ D D +Y L+ GLC+ K A +
Sbjct: 410 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDA 469
Query: 251 MIEKGLLPQKVTFETLYRGLIQS 273
M+ G P + ++ L G ++
Sbjct: 470 MLSSGCEPNHIVYDALIDGFCKA 492
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 131/305 (42%), Gaps = 21/305 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +L+ G+ K ++ +R + M+ G PN +N L++ C
Sbjct: 139 IPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCN--------- 189
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK A K+ + M G P ++I + S + +L L + EK +A
Sbjct: 190 -EKDYAYAYKLLNRMTTCGCPPGYVVYNIFIG--SICGQEKLPSPDLLDLAEKIYGEMLA 246
Query: 121 T--------YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
+ +CLC G+ + A +L+ EM+R G P TY+
Sbjct: 247 ANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEK 306
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A L+++MK + P+++TY ILI F ++ + ++ ++ + +YT LI
Sbjct: 307 AFLLFQEMKMVGV-TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 365
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
H + ++ +A F M++ G P VT+ L GL ++ + + KL S +
Sbjct: 366 HAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS 425
Query: 293 FGSEF 297
S+F
Sbjct: 426 ADSDF 430
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 101/269 (37%), Gaps = 20/269 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +L+ ++D+ R EM E G + T + +C+
Sbjct: 38 PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEG-------- 89
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R A+ D + + D + ++ A ++ L+ M+ P V T
Sbjct: 90 ----RWAD-ALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ ++ + ++ M+ G +P+ +N Y KD A KL +M
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204
Query: 182 EDDLCVPNIHTYNILIGMFMALNR------MDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
C P YNI IG + +D+ +I+ + + L+ + L
Sbjct: 205 TCG-CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCL 263
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
C K+ +A Q EM+ KG +P T+
Sbjct: 264 CGVGKFDKAFQLIKEMMRKGFVPDTSTYS 292
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 76/199 (38%), Gaps = 20/199 (10%)
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
D ++ G P +++ ++ V S A + L M E G C T LC
Sbjct: 29 DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88
Query: 133 GRIEDAEELLGE--------MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
GR DA +++ + + +S E +F E AM +M+ +
Sbjct: 89 GRWADALDMIEREDFKLDTVLCTHMISGLMEAS--YFDE---------AMSFLHRMRCNS 137
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
C+PN+ TY L+ F+ ++ + I N + + + L+H C ++ + A
Sbjct: 138 -CIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYA 196
Query: 245 CQYFVEMIEKGLLPQKVTF 263
+ M G P V +
Sbjct: 197 YKLLNRMTTCGCPPGYVVY 215
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 142/306 (46%), Gaps = 16/306 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V Y +LI+G C +D A R EM ++G+ P++ TY +L+NG +
Sbjct: 387 VPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGY------ 440
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A F+EM +G++PD +++ + + ++ M G P V
Sbjct: 441 ----VSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVI 496
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY V LC G E+A +LL MV +G+ P TY + A +++ +M
Sbjct: 497 TYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEM 556
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P++ TY +LI A +D+ ++ + + ++ +Y +I+GLC ++
Sbjct: 557 LSKGV-APSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRR-LKKKLDEESITFGS 295
EA +YF EM EKG+LP K ++ L + LR +R L +K+ +S T
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSV 675
Query: 296 EFQNYH 301
+N H
Sbjct: 676 FLKNLH 681
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 148/353 (41%), Gaps = 65/353 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y +++ +CK R+D A L EM ERG PN VTYNVL+NG+ ++ L +
Sbjct: 213 PTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGL 272
Query: 62 EKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ + N A + +EM R P +++++ ++ Y
Sbjct: 273 IEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLM--YGL 330
Query: 97 AHKPQLSLDKLNF--MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
Q++ +L F M + P + ++ S++ C G I +A L E+ + P+
Sbjct: 331 CKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTV 390
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TYN + A++L ++M + L P+I TY IL+ L + M R +N
Sbjct: 391 ITYNTLIHGLCMWGYLDAALRLKKEMTDQGL-FPDIFTYTILVNGCFKLGYVSMARGFFN 449
Query: 215 HVKGSEL---------------------------------GL--DLDSYTMLIHGLCEKQ 239
+ L G D+ +Y + +H LC++
Sbjct: 450 EMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQG 509
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
++EAC M+ GL+P VT+ ++ G +++ LR R + ++ + +
Sbjct: 510 NFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVA 562
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + SL+YG+C+ I A E+ R + P V+TYN L++G+C L R
Sbjct: 353 PDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRL 412
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K EM +G+ PD+ +++I+++ + ++ N M KG+ P
Sbjct: 413 KK----------EMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFA 462
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + + A + EM+ G P TYN F + + A L M
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D L +P+ TY +I F+ + RE++N + + + +YT+LIH KQ
Sbjct: 523 SDGL-IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQML 581
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A YF +M+EK + +T+ + GL + + + +++E+ I
Sbjct: 582 DLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGI 631
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 126/263 (47%), Gaps = 11/263 (4%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
+MI G+ P+V N +L + R E + A+ V+ M GI+P V +++
Sbjct: 170 KMIRNGLLPDVKNCNRILRVL----------RDENLLSKAKNVYGMMEQFGIKPTVVTYN 219
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
+L Y + + +L+ L+ M+E+G P TY +V L G +E A+ L+ EM+ +
Sbjct: 220 TMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNS 279
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G++ SA TYN + + A L +M + P + TYN L+ ++
Sbjct: 280 GLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMV-NRRAFPTLSTYNTLMYGLCKWVQVTG 338
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
VR ++ + S+ D+ S+ L++G C EA F E+ + L+P +T+ TL
Sbjct: 339 VRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIH 398
Query: 269 GLIQSDMLRTWRRLKKKLDEESI 291
GL L RLKK++ ++ +
Sbjct: 399 GLCMWGYLDAALRLKKEMTDQGL 421
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 119/269 (44%), Gaps = 11/269 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+VK ++ N + A+ G M + G++P VVTYN +L+ C+
Sbjct: 177 LPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCK--------- 227
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A ++ EM+ RG P+ +++++++ S+ + + + + M G+ +
Sbjct: 228 -EGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ C G +A +L+ EMV P+ TYN G + M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P+I ++N L+ + + +++ +K +L + +Y LIHGLC
Sbjct: 347 LKSKF-TPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG 269
A + EM ++GL P T+ L G
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNG 434
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YT LI C + + A R EM++R ++P+ T++V L + R +H +
Sbjct: 632 LPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQC 691
Query: 61 FEKTIRNAEKVFD---EMRVRGIE 81
E I+N E + EM + G+E
Sbjct: 692 VESLIQNVEDNINVRIEMLIGGLE 715
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 156/337 (46%), Gaps = 63/337 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
P+V Y +L+ G CK +RID A L EM G P+ VT+NVL+NG+C++ +
Sbjct: 221 PDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKL 280
Query: 57 ----------PNERFEKTIRN----------AEKVFDEMRVRGIEP-DVTSFSIV----- 90
PNE TI N A + D M P DVT +++
Sbjct: 281 VDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVK 340
Query: 91 -------LHVYS----RAH------------------KPQLSLDKLNFMKEKGICPTVAT 121
+H+ S R H K + ++ M EKG P +
Sbjct: 341 QGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVV 400
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ LC G++++A+E+L EMV G +P+A TY+ K + ++ A++++++M
Sbjct: 401 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 460
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+++ CVPN Y++LI ++ +W H+ G L D+ +Y+ +IHGLC
Sbjct: 461 KNN-CVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSV 519
Query: 242 KEACQYFVEMI--EKGLLPQKVTFETLYRGLIQSDML 276
+ + F EM+ E P VT+ L R L + + +
Sbjct: 520 EVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSI 556
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 15/287 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + +I CK+ +D A EM + EP+V TY L++G+C+
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCK---------- 235
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A + DEM++ G P +F+++++ + ++ M KG P T
Sbjct: 236 EDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVT 295
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G+++ A LL MV + P+ TY + + + L ++
Sbjct: 296 YNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLE 355
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E N + Y+ LI + + +W + ++ Y+ LI GLC + K
Sbjct: 356 ERGH-HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKL 414
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD----MLRTWRRLKK 284
EA + EM+ KG P T+ +L +G ++ +R W+ + K
Sbjct: 415 DEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAK 461
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
PN+ +Y++LI G C+ ++D A+ L EM+ +G PN TY+ L+ G + +
Sbjct: 396 PNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRV 455
Query: 57 ----------PNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PNE + +R A ++ M RG+ PDV ++S ++H
Sbjct: 456 WKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCN 515
Query: 97 AHKPQLSLDKLNFM--KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
A ++ L N M +E P V TY +++ LC I A +LL M+ G +P
Sbjct: 516 AGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDL 575
Query: 155 ETYNCFFKEYR 165
T N F R
Sbjct: 576 ITCNIFLNALR 586
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 128/304 (42%), Gaps = 39/304 (12%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y++LI G K + + A +M+E+G +PN+V Y+ L++G+CR L
Sbjct: 366 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLD---------- 415
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A+++ EM +G P+ ++S ++ + + Q ++ M + P Y+ ++
Sbjct: 416 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 475
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM--KEDD 184
LC G++ +A + M+ G+ P Y+ +KL+ +M +E D
Sbjct: 476 HGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESD 535
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK------ 238
P++ TYNIL+ N + ++ N + DL + + ++ L EK
Sbjct: 536 -SQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQD 594
Query: 239 ---------------QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL-----IQSDMLRT 278
Q+ A + M++K L P T+E + L +Q+ + +
Sbjct: 595 GREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKC 654
Query: 279 WRRL 282
W L
Sbjct: 655 WSSL 658
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 122/289 (42%), Gaps = 20/289 (6%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMI-ERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
K + + + K + + A G M+ E V ++N +LN + + H
Sbjct: 116 KNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFH------- 168
Query: 64 TIRNAEKVFDEMRVRG---IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
R E F E V G I P+V SF++V+ + +++ M + P V
Sbjct: 169 --RALE--FYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVF 224
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC RI++A LL EM G PS+ T+N + D KL M
Sbjct: 225 TYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNM 284
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
CVPN TYN +I ++D + + + S+ + +Y LI+GL ++ +
Sbjct: 285 FLKG-CVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGR 343
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK 285
+ + E+G + + TL GL + + + W+++ +K
Sbjct: 344 SVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEK 392
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 15/118 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE-- 59
P+V Y L+ CK N I A L M++RG P+++T N+ LN + R L+P +
Sbjct: 538 PDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL--REKLNPPQDG 595
Query: 60 ---------RFEKTIR--NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK 106
R K R A K+ + M + + P+ +++ ++ + K Q +DK
Sbjct: 596 REFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDK 653
>gi|242050034|ref|XP_002462761.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
gi|241926138|gb|EER99282.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
Length = 535
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 129/262 (49%), Gaps = 14/262 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT++++ WC+ ++D AER EM + G+ PNV TY +++ + R
Sbjct: 238 PDVVLYTAVVHAWCRAGQLDEAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQ------- 290
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++ +M G P+ +F+ ++ + +A + + L N M + P + T
Sbjct: 291 ---VPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMHQLRCEPDIIT 347
Query: 122 YTSVVKCLCSCGR--IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++ C G+ ++ A ++L +M+ P T+N F+ + A KLY +
Sbjct: 348 YNFLIETHCGKGQGNLDAALKVLDKMIAKKCVPDCHTFNPMFRLLVVLGNIGAAHKLYEK 407
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+E C PN+ TYN L+ +F MDMV + ++ + ++ +Y LI C +
Sbjct: 408 MRELQ-CKPNVVTYNCLLKLFNKEKSMDMVLRMKKNMDVEGIEPNMHTYAALIEAFCGRG 466
Query: 240 KWKEACQYFVEMI-EKGLLPQK 260
WK A EMI EK P K
Sbjct: 467 NWKRAHATLKEMIEEKSFKPSK 488
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A+ +FD R PDV ++ V+H + RA + + M++ GI P V TYT+V+
Sbjct: 225 AQALFDSCRTV-FTPDVVLYTAVVHAWCRAGQLDEAERVFAEMQQSGIMPNVYTYTAVID 283
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
+ G++ A+ELL +M+ +G P+ T+N + + + ++++ QM + C
Sbjct: 284 AMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMHQLR-CE 342
Query: 188 PNIHTYNILIGMFMALNR--MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
P+I TYN LI + +D ++ + + + D ++ + L A
Sbjct: 343 PDIITYNFLIETHCGKGQGNLDAALKVLDKMIAKKCVPDCHTFNPMFRLLVVLGNIGAAH 402
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ + +M E P VT+ L + + + R+KK +D E I
Sbjct: 403 KLYEKMRELQCKPNVVTYNCLLKLFNKEKSMDMVLRMKKNMDVEGI 448
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 99/258 (38%), Gaps = 38/258 (14%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG------------- 114
A + DEMR R + ++ Y RA P + D M+E G
Sbjct: 154 ARHLLDEMRERAVPISSRLIFALIRRYVRAEMPSEAADLFRRMEEYGSGAPEPATLASLL 213
Query: 115 ----------------------ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
P V YT+VV C G++++AE + EM ++G+ P
Sbjct: 214 AALSKKRLASEAQALFDSCRTVFTPDVVLYTAVVHAWCRAGQLDEAERVFAEMQQSGIMP 273
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
+ TY A +L QM D C PN T+N ++ + R + V ++
Sbjct: 274 NVYTYTAVIDAMYRAGQVPRAQELLCQMI-DSGCPPNTATFNAIMRAHVKAGRSEQVLQV 332
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQK--WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
N + D+ +Y LI C K + A + +MI K +P TF ++R L
Sbjct: 333 HNQMHQLRCEPDIITYNFLIETHCGKGQGNLDAALKVLDKMIAKKCVPDCHTFNPMFRLL 392
Query: 271 IQSDMLRTWRRLKKKLDE 288
+ + +L +K+ E
Sbjct: 393 VVLGNIGAAHKLYEKMRE 410
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + + + I A + +M E +PNVVTYN LL + S+ R
Sbjct: 379 VPDCHTFNPMFRLLVVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLKLFNKEKSMDMVLR 438
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY------SRAHKPQLSLDKLNFMKEKG 114
+K M V GIEP++ +++ ++ + RAH +L ++ ++EK
Sbjct: 439 MKKN----------MDVEGIEPNMHTYAALIEAFCGRGNWKRAHA---TLKEM--IEEKS 483
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
P+ V+ L G+++ EEL+ MV G
Sbjct: 484 FKPSKQVRDMVLVLLRKAGQLKKHEELVELMVDRG 518
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 5/152 (3%)
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ L A LL EM V S+ + Y + + A L+R+M+
Sbjct: 138 YASMIDLLAKHHHFSLARHLLDEMRERAVPISSRLIFALIRRYVRAEMPSEAADLFRRME 197
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E P T L+ + +++ + + D+ YT ++H C +
Sbjct: 198 EYGSGAPEPATLASLLAALSKKRLASEAQALFDSCR-TVFTPDVVLYTAVVHAWCRAGQL 256
Query: 242 KEACQYFVEMIEKGLLPQKVTF----ETLYRG 269
EA + F EM + G++P T+ + +YR
Sbjct: 257 DEAERVFAEMQQSGIMPNVYTYTAVIDAMYRA 288
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 154/317 (48%), Gaps = 28/317 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-----H 56
P+ Y S I G CK R++ A + +M+E G+ PN VTYN L++G C + L +
Sbjct: 284 PDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAY 343
Query: 57 PNERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+E K I +A+ + EMR +G+ PD + +I+++ Y R
Sbjct: 344 RDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCR 403
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + L+ M KGI PT+ TYTS++ L R+++A+ L ++ + G+ P
Sbjct: 404 CGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIV 463
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNH 215
+N + + + A +L ++M D++ V P+ TYN L+ + +++ R++ +
Sbjct: 464 FNALIDGHCANGNIDRAFQLLKEM--DNMKVLPDEITYNTLMQGYCREGKVEEARQLLDE 521
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+K + D SY LI G ++ K+A + EM+ G P +T+ L +GL ++
Sbjct: 522 MKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQE 581
Query: 276 LRTWRRLKKKLDEESIT 292
L K++ + IT
Sbjct: 582 GEHAEELLKEMVSKGIT 598
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 139/291 (47%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN++ ++ + K+NR MA EM + ++ T+N+++N +C+
Sbjct: 178 VPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCK--------- 228
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E ++ A++ M G++P+V +++ ++H + K Q + MK+KG+ P
Sbjct: 229 -EGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCY 287
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S + LC GR+E+A L+ +M+ G+ P+A TYN Y + D + A YR
Sbjct: 288 TYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYA-YRDE 346
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ ++ TYN+ I RM + ++ + D ++ +LI+G C
Sbjct: 347 MISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGD 406
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K A EM+ KG+ P VT+ +L L + + ++ L K+ +E +
Sbjct: 407 AKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGL 457
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 10/172 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ ++ +LI G C ID A + L EM V P+ +TYN L+ G CR
Sbjct: 458 LPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCR--------- 508
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A ++ DEM+ RGI+PD S++ ++ YS+ + + + M G PT+
Sbjct: 509 -EGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTIL 567
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
TY ++++ LC E AEELL EMV G++P TY + D G
Sbjct: 568 TYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLEG 619
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 127/306 (41%), Gaps = 13/306 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + LI NR E L +R + +++L+ C PNE
Sbjct: 111 PSINLIQRLILSPTCTNRTIFDELALAR--DRVDAKTTLIFDLLVRAYCELKK--PNEAL 166
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E F ++ +G P++ + + +L ++ + ++ Q++ M I ++ T
Sbjct: 167 E--------CFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYT 218
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G+++ A+E +G M GV P+ TYN + R A +++ MK
Sbjct: 219 FNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMK 278
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L P+ +TYN I R++ + + L + +Y LI G C K
Sbjct: 279 DKGL-EPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDL 337
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
+A Y EMI KG++ VT+ L + + K++ E+ + + N
Sbjct: 338 DKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNIL 397
Query: 302 FKPYRR 307
Y R
Sbjct: 398 INGYCR 403
>gi|15217756|ref|NP_171744.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806504|sp|Q9FZ19.2|PPR5_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g02420
gi|332189307|gb|AEE27428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 140/265 (52%), Gaps = 14/265 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ + L+ GW + AE F EM +G++P+VVTYN L++ C+
Sbjct: 212 PDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCK---------- 258
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ I A K+ D+MR PDV +++ V+ +P + + L MKE G P VA
Sbjct: 259 DREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAA 318
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + ++ C R+ DA++L+ EMV+ G+SP+A TYN FF+ D + +LY +M
Sbjct: 319 YNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRML 378
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ C+PN + LI MF ++DM +W + G +L+ LC+ K
Sbjct: 379 GNE-CLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKV 437
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+EA + +EM+EKG P V+F+ +
Sbjct: 438 EEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G+ P TYN Y ++ A KL +M+E++ P++ TY +IG + + D
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEE-TPDVITYTTVIGGLGLIGQPDK 299
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
RE+ +K D+ +Y I C ++ +A + EM++KGL P T+ +R
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFR 359
Query: 269 GL-IQSDMLRTW 279
L + +D+ R+W
Sbjct: 360 VLSLANDLGRSW 371
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 156/337 (46%), Gaps = 63/337 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
P+V Y +L+ G CK +RID A L EM G P+ VT+NVL+NG+C++ +
Sbjct: 205 PDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKL 264
Query: 57 ----------PNERFEKTIRN----------AEKVFDEMRVRGIEP-DVTSFSIV----- 90
PNE TI N A + D M P DVT +++
Sbjct: 265 VDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVK 324
Query: 91 -------LHVYS----RAH------------------KPQLSLDKLNFMKEKGICPTVAT 121
+H+ S R H K + ++ M EKG P +
Sbjct: 325 QGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVV 384
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ LC G++++A+E+L EMV G +P+A TY+ K + ++ A++++++M
Sbjct: 385 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 444
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+++ CVPN Y++LI ++ +W H+ G L D+ +Y+ +IHGLC
Sbjct: 445 KNN-CVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSV 503
Query: 242 KEACQYFVEMI--EKGLLPQKVTFETLYRGLIQSDML 276
+ + F EM+ E P VT+ L R L + + +
Sbjct: 504 EVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSI 540
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 15/287 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + +I CK+ +D A EM + EP+V TY L++G+C+
Sbjct: 170 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCK---------- 219
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A + DEM++ G P +F+++++ + ++ M KG P T
Sbjct: 220 EDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVT 279
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G+++ A LL MV + P+ TY + + + L ++
Sbjct: 280 YNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLE 339
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E N + Y+ LI + + +W + ++ Y+ LI GLC + K
Sbjct: 340 ERGH-HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKL 398
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD----MLRTWRRLKK 284
EA + EM+ KG P T+ +L +G ++ +R W+ + K
Sbjct: 399 DEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAK 445
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
PN+ +Y++LI G C+ ++D A+ L EM+ +G PN TY+ L+ G + +
Sbjct: 380 PNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRV 439
Query: 57 ----------PNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PNE + +R A ++ M RG+ PDV ++S ++H
Sbjct: 440 WKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCN 499
Query: 97 AHKPQLSLDKLNFM--KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
A ++ L N M +E P V TY +++ LC I A +LL M+ G +P
Sbjct: 500 AGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDL 559
Query: 155 ETYNCFFKEYR 165
T N F R
Sbjct: 560 ITCNIFLNALR 570
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 106/234 (45%), Gaps = 13/234 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y++LI G K + + A +M+E+G +PN+V Y+ L++G+CR L
Sbjct: 350 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLD---------- 399
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A+++ EM +G P+ ++S ++ + + Q ++ M + P Y+ ++
Sbjct: 400 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 459
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM--KEDD 184
LC G++ +A + M+ G+ P Y+ +KL+ +M +E D
Sbjct: 460 HGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESD 519
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
P++ TYNIL+ N + ++ N + DL + + ++ L EK
Sbjct: 520 -SQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREK 572
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 122/289 (42%), Gaps = 20/289 (6%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMI-ERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
K + + + K + + A G M+ E V ++N +LN + + H
Sbjct: 100 KNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFH------- 152
Query: 64 TIRNAEKVFDEMRVRG---IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
R E F E V G I P+V SF++V+ + +++ M + P V
Sbjct: 153 --RALE--FYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVF 208
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC RI++A LL EM G PS+ T+N + D KL M
Sbjct: 209 TYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNM 268
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
CVPN TYN +I ++D + + + S+ + +Y LI+GL ++ +
Sbjct: 269 FLKG-CVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGR 327
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK 285
+ + E+G + + TL GL + + + W+++ +K
Sbjct: 328 SVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEK 376
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 15/118 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE-- 59
P+V Y L+ CK N I A L M++RG P+++T N+ LN + R L+P +
Sbjct: 522 PDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL--REKLNPPQDG 579
Query: 60 ---------RFEKTIR--NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK 106
R K R A K+ + M + + P+ +++ ++ + K Q +DK
Sbjct: 580 REFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDK 637
>gi|9857539|gb|AAG00894.1|AC064879_12 Hypothetical protein [Arabidopsis thaliana]
Length = 490
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 140/265 (52%), Gaps = 14/265 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ + L+ GW + AE F EM +G++P+VVTYN L++ C+
Sbjct: 211 PDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCK---------- 257
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ I A K+ D+MR PDV +++ V+ +P + + L MKE G P VA
Sbjct: 258 DREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAA 317
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + ++ C R+ DA++L+ EMV+ G+SP+A TYN FF+ D + +LY +M
Sbjct: 318 YNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRML 377
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ C+PN + LI MF ++DM +W + G +L+ LC+ K
Sbjct: 378 GNE-CLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKV 436
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+EA + +EM+EKG P V+F+ +
Sbjct: 437 EEAEKCLLEMVEKGHRPSNVSFKRI 461
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G+ P TYN Y ++ A KL +M+E++ P++ TY +IG + + D
Sbjct: 240 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEE-TPDVITYTTVIGGLGLIGQPDK 298
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
RE+ +K D+ +Y I C ++ +A + EM++KGL P T+ +R
Sbjct: 299 AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFR 358
Query: 269 GL-IQSDMLRTW 279
L + +D+ R+W
Sbjct: 359 VLSLANDLGRSW 370
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 141/280 (50%), Gaps = 20/280 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +++LI G CK + D A +MI G PNVVTYNVL+NG+C+ ++
Sbjct: 852 PDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCK------TDKM 905
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A + + M +G+ PDV ++S+++ + +A +L+ L+ M +G P V T
Sbjct: 906 ER----AHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVT 961
Query: 122 YTSVVKCLCSCGRIEDAEELLGEM-VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ S++ LC + +A ++ +M +++G++P TY C + R G ++
Sbjct: 962 FNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITY-CTLIDGLFRTGWAGQAEVLLDA 1020
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D P+ + +N I L+++ V + + EL D ++ +LI G C+
Sbjct: 1021 MPD----PDTYAFNCCIN---GLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGN 1073
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR-TW 279
+++A F EM+ K L P +TF L GL ++ + TW
Sbjct: 1074 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATW 1113
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 144/331 (43%), Gaps = 42/331 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVE--PNVVTYNVLLNGVCRRASLHPN 58
+PNV Y+ LI G CK+ RID A + EM + + PN++TYN L+G+C+++
Sbjct: 283 VPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEA 342
Query: 59 ERFEKTIRN---------------------------AEKVFDEMRVRGIEPDVTSFSIVL 91
+++R+ A VFD+M G P+V +++ ++
Sbjct: 343 CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALV 402
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ +A K + + + M +KG+ P V TY+ +V C R+++A ELL M G +
Sbjct: 403 NGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT 462
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P+ T+N + A +++ M VP+ TY LI R
Sbjct: 463 PNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEA 522
Query: 212 IWNHVKGSELGLDLDSYTM--LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + + D D+Y I+GL + A Q + M+E L+P KVTF L G
Sbjct: 523 LLDAMP------DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAG 576
Query: 270 LIQSDMLRTWRRL-----KKKLDEESITFGS 295
++ L K L + +TFG+
Sbjct: 577 ACKAGNFEQASALFEEMVAKNLQPDVMTFGA 607
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 137/277 (49%), Gaps = 16/277 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI CK ++ A R G+M R PNVVTY+VL+NG+C+
Sbjct: 249 PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGR------- 301
Query: 62 EKTIRNAEKVFDEMRVRGIE--PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG--ICP 117
I A ++ EM + + P++ +++ L + + + + +++ + P
Sbjct: 302 ---IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 358
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T+++++ LC CG+I++A + +M+ G P+ TYN A +
Sbjct: 359 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 418
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
M + + P++ TY++L+ F +R+D E+ + + ++ ++ +I GLC+
Sbjct: 419 ESMVDKGV-TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 477
Query: 238 KQKWKEACQYFVEM-IEKGLLPQKVTFETLYRGLIQS 273
+ EA Q F +M ++ GL+P K+T+ TL GL ++
Sbjct: 478 SDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRT 514
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 20/291 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + I G K+ + A + M+E + P+ VT+N+L+ G C+ + F
Sbjct: 530 PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGN------F 583
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A +F+EM + ++PDV +F ++ +A + + + D L+ M G+ P V T
Sbjct: 584 EQ----ASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 639
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V LC GRIE+A + L EMV +G P + TY + A++L ++K
Sbjct: 640 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 699
Query: 182 E---DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
D P+ TYNIL+ + + + + G D+ +Y LI LC+
Sbjct: 700 SFGWD----PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKA 755
Query: 239 QKWKEACQYFVEM---IEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+EA + +M + + +P VT+ L GL + + R L +++
Sbjct: 756 GDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEM 806
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 143/368 (38%), Gaps = 86/368 (23%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + LI G CK + A EM+ + ++P+V+T+ L++G+C+
Sbjct: 564 VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ------ 617
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A + D M G+ P+V +++ ++H ++ + + + L M G P
Sbjct: 618 ----VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSI 673
Query: 121 TYTSVVKCLCSCGRIEDAEEL-----------------------------------LGEM 145
TY S+V LC R +DA +L L EM
Sbjct: 674 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEM 733
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--DDLCVPNIHTYNILIGMFMAL 203
V G P TYN D A +L+ M CVPN+ TY++LI +
Sbjct: 734 VGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKV 793
Query: 204 NRMDMVREIWNHV--------------------------------------KGS-ELGLD 224
R+D RE+ + GS + D
Sbjct: 794 GRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPD 853
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
+++ LI GLC+ + EAC F +MI G +P VT+ L GL ++D + + +
Sbjct: 854 TVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIE 913
Query: 285 KLDEESIT 292
+ ++ +T
Sbjct: 914 SMVDKGVT 921
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 142/315 (45%), Gaps = 51/315 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y SL+Y C+ +R D A + + E+ G +P+ VTYN+L++G L + +
Sbjct: 669 VPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG------LWKSGQ 722
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL---DKLNFMKEKGICP 117
E+ I V +EM +G PDV +++ ++ +A + + ++ + P
Sbjct: 723 TEQAI----TVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVP 778
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNG--VSPSAETYNCFFKEYRGRKDANGAMK 175
V TY+ ++ LC GRI++A EL+ EM+R V P+ TYN F + A +
Sbjct: 779 NVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACE 838
Query: 176 LYRQMKE----------------DDLC--------------------VPNIHTYNILIGM 199
L R +++ D LC VPN+ TYN+L+
Sbjct: 839 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNG 898
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
++M+ + + + D+ +Y++L+ C+ EA + M +G P
Sbjct: 899 LCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPN 958
Query: 260 KVTFETLYRGLIQSD 274
VTF ++ GL +SD
Sbjct: 959 VVTFNSIIDGLCKSD 973
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 121/258 (46%), Gaps = 14/258 (5%)
Query: 39 VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
V YN++L +CR +T R E EM G+ P + +++ +++ +++
Sbjct: 180 VADYNIVLQSLCRAG---------ETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSN 230
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
+ ++ + E+G P V TY +++ LC G +E+A L G+M P+ TY+
Sbjct: 231 ELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYS 290
Query: 159 CFFKEYRGRKDANGAMKLYRQM--KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+ A +L ++M K D+ +PNI TYN + + E+ +
Sbjct: 291 VLINGLCKVGRIDEARELIQEMTRKSCDV-LPNIITYNSFLDGLCKQSMTAEACELMRSL 349
Query: 217 KGSELGLDLD--SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ L + D +++ LI GLC+ + EAC F +MI G +P +T+ L GL ++D
Sbjct: 350 RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKAD 409
Query: 275 MLRTWRRLKKKLDEESIT 292
+ + + + ++ +T
Sbjct: 410 KMERAHAMIESMVDKGVT 427
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + I G K+ + R L M+E + P+ VT+N+L+ G C+ + F
Sbjct: 1024 PDTYAFNCCINGLSKLGDV---SRALHRMLELELVPDKVTFNILIAGACKAGN------F 1074
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLD 105
E+ A +F+EM + ++PDV +F ++ +A + + + D
Sbjct: 1075 EQ----ASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWD 1114
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL 55
+P+ + LI G CK + A EM+ + ++P+V+T+ L++G+C+ +
Sbjct: 1055 VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQV 1109
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+ LI G C+ ++D A L EMI+ G +PNVVTY LL+G+C+ L
Sbjct: 85 PNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL------ 138
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +F M RG PD +++++ +S+ + M EKG PTV T
Sbjct: 139 ----KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ G + L +M+R G P+ T+N + D A +L+ +M+
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR 254
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P++ +YN LI + + + + + S +G D+ SY +LI G +
Sbjct: 255 SLG-CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
A + F E+ + GL P ++ T+
Sbjct: 314 DHAIKLFYEIPKSGLEPDAFSYSTI 338
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 13/295 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y L+ K R D +M+ G PN TY LL +C+ +RFE+
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQA------QRFEE--- 70
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A VF M +G P+V S+SI++ R K + + LN M + G P V TY S++
Sbjct: 71 -ARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G++++A +L MV G P YN + + D A +L+ +M E C
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKG-C 188
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+P + TYN L+ F V+ ++ + ++ ++ L+ G C+ EA +
Sbjct: 189 IPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHR 248
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
F+EM G P V++ TL RG+ +RL +++ + G + +Y+
Sbjct: 249 LFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGV--GPDIVSYN 301
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 52/273 (19%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ + +L+ G+CK+ + A R EM G P+VV+YN L+ G+C + H
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPH---- 279
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A+++ EM G+ PD+ S++I++ YS++ ++ + + G+ P
Sbjct: 280 ------EAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAF 333
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY-NCFFKEYRGRKDANGAMKLYRQ 179
+Y++++ CLC G++ A + +M+ NG +P A RG + + +L++
Sbjct: 334 SYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTE-SCELFQA 392
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + + CVP I YN +L++ LC+ +
Sbjct: 393 MVKFE-CVPLIPEYN-----------------------------------LLMYKLCKAK 416
Query: 240 KWKEACQYFVEMIEKGLLP----QKVTFETLYR 268
+ + C+ F E+ E+G P KV ETL R
Sbjct: 417 RSDDVCEIFHELTERGFSPDVEISKVILETLRR 449
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 81/207 (39%), Gaps = 45/207 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G C + A+R L EMI GV P++V+YN+L++G + +L
Sbjct: 260 PDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALD----- 314
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+F E+ G+EPD S+S ++ RA K + M G P A
Sbjct: 315 -----HAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369
Query: 122 YTSVV----------------------KC-------------LCSCGRIEDAEELLGEMV 146
+V +C LC R +D E+ E+
Sbjct: 370 VIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELT 429
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGA 173
G SP E + R D + A
Sbjct: 430 ERGFSPDVEISKVILETLRRSDDKDAA 456
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
S++ +L V +++ + N M G P TY +++ LC R E+A + M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 146 VRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
G SP+ +Y+ RG+K + A +L +M D PN+ TY L+ +
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQK-VDEAAELLNEMI-DGGHQPNVVTYGSLLSGLCKMG 136
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
++ ++++ + D Y +LI G +K EA + F EM+EKG +P T+
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196
Query: 265 TLYRGL--------IQS---DMLR 277
+L G +QS DMLR
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLR 220
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 11/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ +Y +L+ G+ K + A L EMI GV+PN + Y+ L+ G+C+ L
Sbjct: 346 PNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLG----- 400
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+ EM G+ PD +++ ++ + + H + + LN M+ GI P V +
Sbjct: 401 -----RASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYS 455
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G ++A LL EM+ G+ P+A Y + + + A + +M
Sbjct: 456 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMT 515
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ P++ YN LI + RM+ E + V+ L D +Y+ LIHG C+
Sbjct: 516 KANVH-PDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNL 574
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
++A Q +M+ GL P T+ L G +S+
Sbjct: 575 EKADQLLRQMLNSGLKPNADTYTDLLEGYFKSN 607
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 150/319 (47%), Gaps = 46/319 (14%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y +I G C+ ++ A F EM++ G+ P+ TY L+NG+C+ + L
Sbjct: 277 NEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRL------- 329
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A+ + DEM G++P++ + ++ + + K + D L M G+ P Y
Sbjct: 330 ---KEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMY 386
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++++ LC G++ A +LL EM++ G+ P TYN + + + D +GA +L +M+
Sbjct: 387 DNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRN 446
Query: 183 DDLCVPNIHTYNILIGMFM-------ALNRM-DMVRE------------IWNHVKGSELG 222
+ +PN+++Y I+I A N + +M+ E I H K +
Sbjct: 447 SGI-LPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNIS 505
Query: 223 L---------------DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
L DL Y LI GL + +EA +Y+ ++ ++GL+P + T+ L
Sbjct: 506 LACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLI 565
Query: 268 RGLIQSDMLRTWRRLKKKL 286
G ++ L +L +++
Sbjct: 566 HGYCKTGNLEKADQLLRQM 584
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 27/300 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNG------------- 48
PN MY +LI G CKI ++ A + L EMI+ G+ P+ TYN L+ G
Sbjct: 381 PNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFEL 440
Query: 49 --VCRRASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R + + PN + N A + +EM G++P+ ++ ++ +S+
Sbjct: 441 LNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSK 500
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
L+ + L M + + P + Y S++K L + GR+E+AEE ++ + G+ P T
Sbjct: 501 EGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFT 560
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ Y + A +L RQM L PN TY L+ + N + V I +
Sbjct: 561 YSGLIHGYCKTGNLEKADQLLRQMLNSGL-KPNADTYTDLLEGYFKSNDYEKVSSILQSM 619
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDM 275
GS D Y ++I L + + A E+ + GL+P + +L GL + +DM
Sbjct: 620 LGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADM 679
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 46/269 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+ LI+G+CK ++ A++ L +M+ G++PN TY LL G + +
Sbjct: 555 VPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFK------SND 608
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+EK + M G +PD + IV+ SR+ +++ L +++ G+ P +
Sbjct: 609 YEKV----SSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 664
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y+S++ LC +E A LL EM + G+
Sbjct: 665 IYSSLISGLCKIADMEKAVGLLDEMAKEGLE----------------------------- 695
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
P I YN LI F + R +++ + L + +YT LI G C+
Sbjct: 696 -------PGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGD 748
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+A + EM+++G+ P + L G
Sbjct: 749 ITDAFDLYKEMLDRGIAPDAFVYNVLATG 777
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 110/261 (42%), Gaps = 29/261 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ +Y+SLI G CKI ++ A L EM + G+EP +V YN L++G CR
Sbjct: 660 VPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD------ 713
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A VFD + +G+ P+ +++ ++ + + D M ++GI P
Sbjct: 714 ----ISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAF 769
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y + +E A L EM G + + +N + R KL M
Sbjct: 770 VYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVM 828
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL-DSYTMLIHGLCEKQ 239
+ ++ VPN T ++ F ++ ++ ++ + D +++L
Sbjct: 829 MDREI-VPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLL-------- 879
Query: 240 KWKEACQYFVEMIEKGLLPQK 260
F +MI KGL+P K
Sbjct: 880 --------FTDMINKGLIPPK 892
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 125/303 (41%), Gaps = 46/303 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + L+ + + +++ + G M G+ P+V TY+ + C+
Sbjct: 206 PTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCK---------- 255
Query: 62 EKTIRNAEKVFDEMRVR-----------------------------------GIEPDVTS 86
+ A+KVF+EMR R G+ PD +
Sbjct: 256 ARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFT 315
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
+ +++ + + + + L+ M G+ P + Y ++V G+ +A ++L EM+
Sbjct: 316 YGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMI 375
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
GV P+ Y+ + A KL ++M + L P+ TYN L+ +
Sbjct: 376 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGL-RPDTFTYNPLMQGHFQQHDK 434
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D E+ N ++ S + ++ SY ++I+GLC+ + KEA EMI +GL P + L
Sbjct: 435 DGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPL 494
Query: 267 YRG 269
G
Sbjct: 495 IIG 497
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 133/324 (41%), Gaps = 20/324 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNV---LLNGVCRRASLHPN 58
P+ + L C + A L +MI P +V ++ + + R S P+
Sbjct: 113 PSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPS 172
Query: 59 --------ERFEKT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
+ ++KT +RNA +V M G+ P + +L RA +L
Sbjct: 173 TAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKG 232
Query: 109 FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168
FM+ GI P V TY++ ++ C + A+++ EM R + + TYN
Sbjct: 233 FMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 292
Query: 169 DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
A +M + L P+ TY L+ +R+ + + + + S L ++ Y
Sbjct: 293 AVEEAFGFKEEMVDYGLS-PDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVY 351
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK--- 285
L+ G ++ K EA EMI G+ P K+ ++ L RGL + L +L K+
Sbjct: 352 GTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIK 411
Query: 286 --LDEESITFGSEFQNYHFKPYRR 307
L ++ T+ Q HF+ + +
Sbjct: 412 VGLRPDTFTYNPLMQG-HFQQHDK 434
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 101/270 (37%), Gaps = 61/270 (22%)
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
+ PD S S++ S + P+L LD + + + P+ + + LC+ A
Sbjct: 77 LSPDAVS-SLIFGGRSHSLHPKLLLDFFYWSRPRIAPPSADAFARLAASLCAASLFPQAN 135
Query: 140 ELLGEMV-----------------------RNGVSPSAETYNCFFKEYR----------- 165
LL +M+ SPS + Y+
Sbjct: 136 GLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQV 195
Query: 166 -----------GRKDANG---------AMKLYRQMK---EDDLCVPNIHTYNILIGMFMA 202
R+ NG AM+L ++K E +P+++TY+ I
Sbjct: 196 VLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCK 255
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
D ++++ ++ + ++ +Y ++I GLC +EA + EM++ GL P T
Sbjct: 256 ARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFT 315
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ L GL + L+ + L LDE S +
Sbjct: 316 YGALMNGLCKGSRLKEAKAL---LDEMSCS 342
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 141/287 (49%), Gaps = 15/287 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI ++ + +M++ G+ NV +YN++++ C+ + +
Sbjct: 430 YLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMD---------- 479
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A F EM+ +GI P++ +F+ ++ Y + + S D L + E G P + T++S++
Sbjct: 480 KATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSII 539
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC +IEDA EMV G+SP+A TYN D +MKL R+M+ D +
Sbjct: 540 DGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGI- 598
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT--MLIHGLCEKQKWKEA 244
P++ ++N LI F + +++ +++++ + LGL D+YT I C+ ++ EA
Sbjct: 599 NPDVFSFNALIQSFCRMGKVEDAKKLFSSML--SLGLIPDNYTYVAFIKVFCQSGRFNEA 656
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ F+ M G +P T + L++ D +++ K E I
Sbjct: 657 KELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGI 703
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 110/211 (52%), Gaps = 11/211 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + +LI G+CK I + L ++E G +P++ T++ +++G+CR
Sbjct: 495 PNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCR---------- 544
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K I +A F EM + G+ P+ +++I++H S+ L M+ GI P V +
Sbjct: 545 AKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFS 604
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++++ C G++EDA++L M+ G+ P TY F K + N A +L+ M
Sbjct: 605 FNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSM- 663
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
E + C+P+ T NI++ + ++ + ++I
Sbjct: 664 EANGCMPDSFTCNIILDALVKQDQFEAAQKI 694
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++S+I G C+ +I+ A EM+ G+ PN VTYN+L++ +C
Sbjct: 530 PDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGD------- 582
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + K+ +M+ GI PDV SF+ ++ + R K + + + M G+ P T
Sbjct: 583 ---VPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYT 639
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + +K C GR +A+EL M NG P + T N + A K+ +
Sbjct: 640 YVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCS 699
Query: 182 E 182
E
Sbjct: 700 E 700
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 131/307 (42%), Gaps = 22/307 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ ++Y ++I K N +D+A +M +P+ TYN+L++GVCR
Sbjct: 215 PSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSG-------- 266
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++ +M G P+V +++I++ + A K + L MK + + P+ AT
Sbjct: 267 --VVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEAT 324
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMV-RNGVSP--SAETYNCFFKEYRGRKDANGAMKLYR 178
S + + C A EL E + R V + +T C ++A +K +
Sbjct: 325 IRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFG 384
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
++ P+ T+NI + + ++ V I + + +Y LI L
Sbjct: 385 KIGHK----PDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMA 440
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML----RTWRRLK-KKLDEESITF 293
K E YF +M++ GLL ++ + ++ M+ T++ ++ K + +TF
Sbjct: 441 GKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTF 500
Query: 294 GSEFQNY 300
+ Y
Sbjct: 501 NTLIDGY 507
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 1/140 (0%)
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G + +E+ G++ G+SPS YN + A ++QM D+ C P+ T
Sbjct: 196 GLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADN-CKPDRFT 254
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
YNILI +D + ++G ++ +YT+LI G +K EA + M
Sbjct: 255 YNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMK 314
Query: 253 EKGLLPQKVTFETLYRGLIQ 272
+ + P + T + G+ +
Sbjct: 315 ARKVSPSEATIRSFIHGVFR 334
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 91/234 (38%), Gaps = 7/234 (2%)
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
+++F ++ GI P ++ V+ +++ L+ K M P TY ++
Sbjct: 202 DEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHG 261
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
+C G +++A L+ +M G SP+ TY + K + A ++ MK +
Sbjct: 262 VCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPS 321
Query: 189 NIHTYNILIGMF--MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+ + G+F +A N+ E+ E L + L+ L K +EA
Sbjct: 322 EATIRSFIHGVFRCVAPNK---AFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGA 378
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
+ + G P TF LI+ L + + E+ + FG F Y
Sbjct: 379 LLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFG--FSTY 430
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 135/274 (49%), Gaps = 15/274 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YTSLI K R+D+A + L +M++ PNVVTY +++G+CR + +E+
Sbjct: 446 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR---IGESEK 502
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+ M +G P+V +++ ++ +A K LSLD M KG P
Sbjct: 503 -------ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 555
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC+ G ++ A LLGEM + + Y C + + K ++ + +M
Sbjct: 556 TYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEM 613
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK--GSELGLDLDSYTMLIHGLCEK 238
E VP Y +LI F R+++ E+ + S + D D Y LI LC
Sbjct: 614 -ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLA 672
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ +EA + + EM +G +P+ F L +GL++
Sbjct: 673 SQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVE 706
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 135/291 (46%), Gaps = 15/291 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-ER 60
P V YT+LI+ + K ++ A M++ G PN VTY L++G+C+ ++ E
Sbjct: 291 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 350
Query: 61 FEKTIRNAEKVFDEMRV-----RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
+ K I ++ + + P+V ++ ++ +AHK + + L+ M G
Sbjct: 351 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 410
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF----FKEYRGRKDAN 171
P Y +++ C G+I+ A+E+ +M + G PS TY FK+ GR D
Sbjct: 411 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKD--GRLDL- 467
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
AMK+ QM +D C PN+ TY +I + + ++ + ++ ++ +YT L
Sbjct: 468 -AMKVLSQMLKDS-CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 525
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
I GL + K + F +M KG P VT+ L L + +L R L
Sbjct: 526 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLL 576
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 13/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +L+ G CK +++D A L M+ G EPN + Y+ L++G C+
Sbjct: 377 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK------- 429
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I +A++VF +M G P V +++ ++ + + L++ L+ M + P V T
Sbjct: 430 ---IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 486
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC G E A +LL M G SP+ TY + ++ L+ QM
Sbjct: 487 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 546
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN TY +LI A +D R + +K + L Y I G + +
Sbjct: 547 RKG-CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSF 603
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ EM G +P + L ++ L L K++ E
Sbjct: 604 IASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 650
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 30/292 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+ +I C +++ A EM GV P+V TY +L++ C+
Sbjct: 220 VPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG------- 272
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A+ +F+EMR G P V +++ ++H Y +A + + D + M + G P
Sbjct: 273 ---LIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 329
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V LC G I A E+ +++ G S SA++ Y
Sbjct: 330 TYGALVDGLCKAGNISKAFEVYAKLI--GTSDSADS------------------DFYFPC 369
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ PN+ TY L+ +++D E+ + + S + Y LI G C+ K
Sbjct: 370 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 429
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + F++M + G LP T+ +L + + L ++ ++ ++S T
Sbjct: 430 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCT 481
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 120/323 (37%), Gaps = 56/323 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN ++ SL++ +C A + L M G P V YN+ + +C + L +
Sbjct: 110 PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLL 169
Query: 62 EKTIRNAEKVFDEMRV-----------------------------------RGIEPDVTS 86
+ AEK++ EM +G PD ++
Sbjct: 170 DL----AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTST 225
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
+S V+ A K + + MK G+ P V TYT ++ C G IE A+ L EM
Sbjct: 226 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 285
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G SP+ TY Y K A ++ +M D C PN TY L+ +
Sbjct: 286 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGALVDGLCKAGNI 344
Query: 207 DMVREIWNHVKGSELGLDLD----------------SYTMLIHGLCEKQKWKEACQYFVE 250
E++ + G+ D D +Y L+ GLC+ K A +
Sbjct: 345 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDA 404
Query: 251 MIEKGLLPQKVTFETLYRGLIQS 273
M+ G P + ++ L G ++
Sbjct: 405 MLSSGCEPNHIVYDALIDGFCKA 427
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 131/305 (42%), Gaps = 21/305 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +L+ G+ K ++ +R + M+ G PN +N L++ C
Sbjct: 74 IPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCN--------- 124
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK A K+ + M G P ++I + S + +L L + EK +A
Sbjct: 125 -EKDYAYAYKLLNRMTTCGCPPGYVVYNIFIG--SICGQEKLPSPDLLDLAEKIYGEMLA 181
Query: 121 T--------YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
+ +CLC G+ + A +L+ EM+R G P TY+
Sbjct: 182 ANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEK 241
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A L+++MK + P+++TY ILI F ++ + ++ ++ + +YT LI
Sbjct: 242 AFLLFQEMKMVGV-TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 300
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
H + ++ +A F M++ G P VT+ L GL ++ + + KL S +
Sbjct: 301 HAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS 360
Query: 293 FGSEF 297
S+F
Sbjct: 361 ADSDF 365
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 138/293 (47%), Gaps = 20/293 (6%)
Query: 2 PNVKMYTSLIYGWCK------INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL 55
P+V Y SLI G+CK + +DM L EM+E G+ P VT+ VL+NG C+ ++
Sbjct: 224 PSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVTFGVLINGYCKNSNT 280
Query: 56 HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
A +VF+EM+ +GI V +++ ++ K + + + M++ G+
Sbjct: 281 AA----------AVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P T+ V+K C G + DA + + M V P YN YR AM
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
+ M + + PN+ TYN LI F + + +K + D+ +Y +LI L
Sbjct: 391 VKEAMAKKGIS-PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
C K + ++A + EM E GL P +T+ T+ +G +++ ++ ++++
Sbjct: 450 CCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 137/287 (47%), Gaps = 8/287 (2%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + ++I G C+I ++ A ++ G+ P+V TYN L++G C++
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGG------- 241
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + + + EM GI P +F ++++ Y + ++ MK++GI +V T
Sbjct: 242 AGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LCS G++E+ +L+ EM G+SP+ T+ C K + + A M
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E ++ P++ YNILI ++ L +M+ + + + ++ +Y LI G W
Sbjct: 362 ERNV-EPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ A EM EKG+ VT+ L L +R +L ++ E
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 126/270 (46%), Gaps = 11/270 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y SLI G C +++ + + EM + G+ PN +T+ +L G C++ +
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMA------ 351
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A D M R +EPDV ++I++ VY R K + ++ M +KGI P V TY
Sbjct: 352 ----DANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTY 407
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ G A LL EM G+ TYN + + A+KL +M E
Sbjct: 408 NCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L PN TYN +I F + EI ++ ++ +Y + I C+ K
Sbjct: 468 VGL-EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMD 526
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA EM++K L+P +T+ET+ G+++
Sbjct: 527 EANDLLNEMLDKCLVPNGITYETIKEGMME 556
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
PS + N G K + A K +R + P+I+T+N +I + ++ +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVS-PDIYTFNTVISGLCRIGQLRKAGD 212
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV-----EMIEKGLLPQKVTFETL 266
+ +K L + +Y LI G C +K Y V EM+E G+ P VTF L
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYC--KKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESIT 292
G ++ R+ +++ ++ I
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIA 296
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 149/316 (47%), Gaps = 26/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV----CRRASLHP 57
PNV +YT+LI G CK I+ ++ +M E V N TY VL+NG ++ +
Sbjct: 184 PNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIEL 243
Query: 58 NERFEKT---------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E+ + T + NA ++FDEMR RG+ +V +++ ++ +
Sbjct: 244 YEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQ 303
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + MK G+ P + +Y +++ CS G ++ A L +M +G SPS T
Sbjct: 304 ERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLAT 363
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + K++ G + R+M+ L P+ TY IL+ + + ++ +I++ +
Sbjct: 364 YNILIAGFSEAKNSAGVTDMVREMEARGLS-PSKVTYTILMDALVRSDNIEKAFQIYSSM 422
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + L D+ Y +LIHGLC KEA + F + E L P V + T+ G +
Sbjct: 423 EKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSS 482
Query: 277 RTWRRLKKKLDEESIT 292
RL K++ E +
Sbjct: 483 YRALRLLKEMGENGMV 498
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 11/272 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V + +I G C++ +D LG+M E G+ PNVV Y L++G C+
Sbjct: 150 DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGD-------- 201
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I +++F +M + + +++++++ + + + ++ MK GI P V TY
Sbjct: 202 --IERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 259
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S++ C+ G++ +A EL EM GV+ + TYN + A +L +MK
Sbjct: 260 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 319
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D L PN+ +YN LI + ++ +D ++N +K S L +Y +LI G E +
Sbjct: 320 DGLS-PNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSA 378
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EM +GL P KVT+ L L++SD
Sbjct: 379 GVTDMVREMEARGLSPSKVTYTILMDALVRSD 410
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 11/265 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y S+I C +++ A EM ERGV NVVTYN L+ G+C+
Sbjct: 253 VPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQ--------- 303
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ + AE++ M+ G+ P++ S++ ++ Y + N MK G P++A
Sbjct: 304 -ERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLA 362
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ +++ EM G+SPS TY + A ++Y M
Sbjct: 363 TYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSM 422
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L V +I+ Y +LI + M +++ + L + Y +I+G C++
Sbjct: 423 EKAGL-VADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGS 481
Query: 241 WKEACQYFVEMIEKGLLPQKVTFET 265
A + EM E G++P ++ +
Sbjct: 482 SYRALRLLKEMGENGMVPNVASYNS 506
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 11/257 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y +LI G C+ R+ AER + M G+ PN+++YN L++G C +L
Sbjct: 290 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLD------ 343
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A +F++M+ G P + +++I++ +S A D + M+ +G+ P+ TY
Sbjct: 344 ----KASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTY 399
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++ L IE A ++ M + G+ Y D A KL++ + E
Sbjct: 400 TILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDE 459
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L PN YN +I + + + + + ++ SY I LC+ +KW
Sbjct: 460 MHL-KPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWT 518
Query: 243 EACQYFVEMIEKGLLPQ 259
EA +MIE GL P
Sbjct: 519 EAEVLLKDMIELGLKPS 535
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 126/267 (47%), Gaps = 12/267 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V ++ ++I + + A + +MI RG+ P T+N LL L + FE
Sbjct: 81 HVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLL------ILLIKSNFFE 134
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K A +VF+E + ++ DV SF I++ + L M+E G+ P V Y
Sbjct: 135 K----AWRVFNETK-GNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVY 189
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ C G IE ++L +M V + TY + ++LY +MK
Sbjct: 190 TTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKL 249
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ VPN++TYN +I +++ E+++ ++ + ++ +Y LI GLC++++
Sbjct: 250 TGI-VPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVL 308
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRG 269
EA + M GL P +++ TL G
Sbjct: 309 EAERLMCRMKRDGLSPNLISYNTLIDG 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT L+ + + I+ A + M + G+ ++ Y VL++G+C +
Sbjct: 394 PSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDM------ 447
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+F + ++P+ ++ +++ Y + +L L M E G+ P VA+
Sbjct: 448 ----KEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVAS 503
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
Y S + LC + +AE LL +M+ G+ PS +N K
Sbjct: 504 YNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISK 544
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y SLI+ R D AE + E+ E+G+ P+ +TYN+L+NG CR A
Sbjct: 359 PTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCA-------- 410
Query: 62 EKTIRNAEKVF---DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
NA+K F DEM GI+P +++ +LHV S+ ++ + + D + +G+ P
Sbjct: 411 -----NAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPD 465
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ +++ CS ++ A ELL +M R V P T+N + + A +L+
Sbjct: 466 AIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFD 525
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+MK + P+ ++N LI + + + N + + + +Y L+ GLC+
Sbjct: 526 EMKRRGI-KPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
Q+ A + EM+ KG+ P T+ TL G+ + ++
Sbjct: 585 QEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNI 621
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 141/291 (48%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P ++ SL+ + K+NR + A EM ++ +V T+N+++N +C+
Sbjct: 183 LPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCK--------- 233
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E ++ A+ M G++P++ +++ ++H Y + + + + L MK + I P
Sbjct: 234 -EGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSF 292
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S++ +C GR+E+A ++ EMV+ G+ PSA YN + + + + A +M
Sbjct: 293 TYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM 352
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P + TYN LI R D + ++ + D +Y +LI+G C
Sbjct: 353 LKKGIS-PTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCAN 411
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K+A EM+ G+ P K T+ +L L + + ++ L KK+ E +
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 143/295 (48%), Gaps = 28/295 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR-----ASLH 56
P+ Y SLI G CK R++ A + EM+++G+ P+ V YN L++G C + AS +
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348
Query: 57 PNERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+E +K I AE + E++ +GI PD +++I+++ Y R
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR 408
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + M GI PT TYTS++ L R+++A++L ++ GV P A
Sbjct: 409 CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIM 468
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIH-TYNILIGMFMALNRMDMVREIWNH 215
+N + + GA +L + M D + VP T+N ++ +++ RE+++
Sbjct: 469 FNALIDGHCSNSNVKGAFELLKDM--DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+K + D S+ LI G + K+A + EM++ G P +T+ L +GL
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGL 581
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 10/157 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ M+ +LI G C + + A L +M V P+ VT+N ++ G CR
Sbjct: 463 LPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR--------- 513
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A ++FDEM+ RGI+PD SF+ ++ YSR + + N M + G PTV
Sbjct: 514 -EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVL 572
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
TY ++V+ LC + AEELL EMV G++P TY
Sbjct: 573 TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTY 609
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 18/197 (9%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN------CFFKE 163
MKEKG+ PT+ T S++ R E A L EM R + S T+N C +
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236
Query: 164 YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223
+ KD G M E PNI TYN ++ + + R++ I +K ++
Sbjct: 237 LKKAKDFVGHM-------ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS---DMLRTWR 280
D +Y LI G+C++ + +EA + F EM++KGL P V + TL G DM ++
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK 349
Query: 281 R--LKKKLDEESITFGS 295
LKK + T+ S
Sbjct: 350 DEMLKKGISPTMSTYNS 366
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 99/206 (48%), Gaps = 11/206 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P K YTSL++ K NR+ A+ ++ GV P+ + +N L++G C ++
Sbjct: 429 PTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSN------- 481
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A ++ +M + PD +F+ ++ + R K + + + + MK +GI P +
Sbjct: 482 ---VKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHIS 538
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ G I+DA + EM+ G +P+ TYN + ++ + A +L ++M
Sbjct: 539 FNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMV 598
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMD 207
+ P+ TY LI +N D
Sbjct: 599 SKGM-TPDDTTYFTLIEGIAKVNIPD 623
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 116/282 (41%), Gaps = 15/282 (5%)
Query: 13 GWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RRASLHPNERFEKTIRNAEK 70
G N I FL +R + + ++ L+ C RA +E FE
Sbjct: 125 GGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRA----DEAFE-------- 172
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
F M+ +G+ P + + + +L ++ + ++ + + M I +V T+ ++ LC
Sbjct: 173 CFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLC 232
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
G+++ A++ +G M +GV P+ TYN Y A + MK + P+
Sbjct: 233 KEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI-EPDS 291
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
TY LI R++ +I+ + L Y LI G C K A Y E
Sbjct: 292 FTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDE 351
Query: 251 MIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
M++KG+ P T+ +L L + K++ E+ I+
Sbjct: 352 MLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 138/293 (47%), Gaps = 20/293 (6%)
Query: 2 PNVKMYTSLIYGWCK------INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL 55
P+V Y SLI G+CK + +DM L EM+E G+ P VT+ VL+NG C+ ++
Sbjct: 224 PSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVTFGVLINGYCKNSNT 280
Query: 56 HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
A +VF+EM+ +GI V +++ ++ K + + + M++ G+
Sbjct: 281 AA----------AVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P T+ V+K C G + DA + + M V P YN YR AM
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
+ M + + PN+ TYN LI F + + +K + D+ +Y +LI L
Sbjct: 391 VKEAMAKKGIS-PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
C K + ++A + EM E GL P +T+ T+ +G +++ ++ ++++
Sbjct: 450 CCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 137/287 (47%), Gaps = 8/287 (2%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + ++I G C+I ++ A ++ G+ P+V TYN L++G C++
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGG------- 241
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + + + EM GI P +F ++++ Y + ++ MK++GI +V T
Sbjct: 242 AGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LCS G++E+ +L+ EM G+SP+ T+ C K + + A M
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E ++ P++ YNILI ++ L +M+ + + + ++ +Y LI G W
Sbjct: 362 ERNV-EPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ A EM EKG+ VT+ L L +R +L ++ E
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 126/270 (46%), Gaps = 11/270 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y SLI G C +++ + + EM + G+ PN +T+ +L G C++ +
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMA------ 351
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A D M R +EPDV ++I++ VY R K + ++ M +KGI P V TY
Sbjct: 352 ----DANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTY 407
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ G A LL EM G+ TYN + + A+KL +M E
Sbjct: 408 NCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L PN TYN +I F + EI ++ ++ +Y + I C+ K
Sbjct: 468 VGL-EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMD 526
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA EM++K L+P +T+ET+ G+++
Sbjct: 527 EANDLLNEMLDKCLVPNGITYETIKEGMME 556
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
PS + N G K + A K +R + P+I+T+N +I + ++ +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVS-PDIYTFNTVISGLCRIGQLRKAGD 212
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV-----EMIEKGLLPQKVTFETL 266
+ +K L + +Y LI G C +K Y V EM+E G+ P VTF L
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYC--KKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESIT 292
G ++ R+ +++ ++ I
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIA 296
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 140/297 (47%), Gaps = 23/297 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G+CK +++ AE +L +M+ GVEPN TYN ++NG C+ +
Sbjct: 284 PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMM------ 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+NA+K+ + +G PD ++S +++ ++ EKG ++
Sbjct: 338 ----QNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIIL 393
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK---EYRGRKDANGAMKLYR 178
Y ++VK L G + A +L+ +M+ +G SP TYN + DANG +
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILN--- 450
Query: 179 QMKEDDL---CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
D + C+P+I T+N LI + MD EI + + + D+ +Y L++GL
Sbjct: 451 ----DAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
C+ +K F M+EKG P +T+ L + + L K++ +T
Sbjct: 507 CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 126/262 (48%), Gaps = 12/262 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ + +LI G+CK +D A L M+ G+ P+V+TYN LLNG+C+
Sbjct: 458 IPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCK--------- 508
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + N F M +G P++ +++I++ + + K +++ MK +G+ P +
Sbjct: 509 -ARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T +++ LCS G ++ A EL + + S S +N + + + + A KL+ +
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHK 627
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M D C P+ +TY ++I + +D+ L + +++ LC
Sbjct: 628 MGGSD-CAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTH 686
Query: 240 KWKEACQYFVEMIEKGLLPQKV 261
+ EA M++ G++P++V
Sbjct: 687 RLSEAVVIINLMVQNGIVPEEV 708
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 124/261 (47%), Gaps = 10/261 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++ G CK+ + A L + I +G P++ T+N L++G C+
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCK---------- 473
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A ++ D M GI PDV +++ +L+ +A K +D M EKG P + T
Sbjct: 474 QRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIIT 533
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C ++ +A EL EM G++P T + + A +L+ ++
Sbjct: 534 YNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + +NI+I F + M ++++ + GS+ D +Y ++I C+
Sbjct: 594 KEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNI 653
Query: 242 KEACQYFVEMIEKGLLPQKVT 262
A + +E I KGL+P T
Sbjct: 654 DLAHTFLLENISKGLVPSFTT 674
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 17/294 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +T + +C R A R L M +G E N V+Y +++G +
Sbjct: 144 PDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYK---------- 193
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A +FDEM +GI PD+ +F+ ++HV + Q S + + ++G+CP + T
Sbjct: 194 ENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFT 253
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN---CFFKEYRGRKDANGAMKLYR 178
+ ++ LC G I++A LL +V G++P +YN C F ++ +A + Y
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEA----ECYL 309
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ PN TYN +I F M +I D +Y+ LI+GLC
Sbjct: 310 HKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCND 369
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A F E +EKG + + TL +GL + ++ +L K + E +
Sbjct: 370 GDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS 423
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 120/254 (47%), Gaps = 12/254 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+SLI G C ++ A E +E+G + +++ YN L+ G+ ++
Sbjct: 353 IPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQG------- 405
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++ +M G PD+ ++++V++ + + LN KG P +
Sbjct: 406 ---LVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIF 462
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ +++ C ++ A E+L M+ +G++P TYN + + + ++ M
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAM 522
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E C PNI TYNILI F ++ E++ +K L D+ + LI GLC +
Sbjct: 523 LEKG-CTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581
Query: 241 WKEACQYFVEMIEK 254
+A + FV IEK
Sbjct: 582 LDKAYELFVT-IEK 594
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 11/277 (3%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y ++ + + ++ A M EP+V +YN ++N +
Sbjct: 78 VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYF---------- 127
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
A KV+ M+ GI PDV + +I + + +P +L LN M +G +Y +V
Sbjct: 128 SQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAV 187
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ +A L EM++ G+ P T+N + + + KL+ ++ + +
Sbjct: 188 ISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGV 247
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
C PN+ T+NI I +D + + L D+ SY LI G C+ K EA
Sbjct: 248 C-PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAE 306
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
Y +M+ G+ P + T+ T+ G ++ M++ ++
Sbjct: 307 CYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI 343
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 48/234 (20%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHV------YSRAHKPQLSLDKLNFMKEKGICPT 118
++ A VF+ M EP V S++ ++++ +S+AHK + MK+ GI P
Sbjct: 92 VQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR------MKDIGIYPD 145
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V T+T +K C GR A LL M G +A +Y + A L+
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFD 205
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M + +C P+I T+N LIH LC+K
Sbjct: 206 EMLKQGIC-PDILTFN-----------------------------------KLIHVLCKK 229
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+E+ + F +++++G+ P TF +GL + + RL + + E +T
Sbjct: 230 GNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT 283
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G++++A + M PS ++YN + A K+Y +MK+ + P+++T
Sbjct: 90 GKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGI-YPDVYT 148
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
+ I + F R + N++ G + SY +I G ++ EA F EM+
Sbjct: 149 HTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEML 208
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
++G+ P +TF L L + ++ +L K+
Sbjct: 209 KQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 140/297 (47%), Gaps = 23/297 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G+CK +++ AE +L +M+ GVEPN TYN ++NG C+ +
Sbjct: 284 PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMM------ 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+NA+K+ + +G PD ++S +++ ++ EKG ++
Sbjct: 338 ----QNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIIL 393
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK---EYRGRKDANGAMKLYR 178
Y ++VK L G + A +L+ +M+ +G SP TYN + DANG +
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILN--- 450
Query: 179 QMKEDDL---CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
D + C+P+I T+N LI + MD EI + + + D+ +Y L++GL
Sbjct: 451 ----DAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGL 506
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
C+ +K F M+EKG P +T+ L + + L K++ +T
Sbjct: 507 CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 126/262 (48%), Gaps = 12/262 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ + +LI G+CK +D A L M+ G+ P+V+TYN LLNG+C+
Sbjct: 458 IPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCK--------- 508
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + N F M +G P++ +++I++ + + K +++ MK +G+ P +
Sbjct: 509 -ARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T +++ LCS G ++ A EL + + S S +N + + + + A KL+ +
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHK 627
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M D C P+ +TY ++I + +D+ L + +++ LC
Sbjct: 628 MGGSD-CAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTH 686
Query: 240 KWKEACQYFVEMIEKGLLPQKV 261
+ EA M++ G++P++V
Sbjct: 687 RLSEAVVIINLMVQNGIVPEEV 708
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 124/261 (47%), Gaps = 10/261 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++ G CK+ + A L + I +G P++ T+N L++G C+
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCK---------- 473
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A ++ D M GI PDV +++ +L+ +A K +D M EKG P + T
Sbjct: 474 QRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIIT 533
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C ++ +A EL EM G++P T + + A +L+ ++
Sbjct: 534 YNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + +NI+I F + M ++++ + GS+ D +Y ++I C+
Sbjct: 594 KEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNI 653
Query: 242 KEACQYFVEMIEKGLLPQKVT 262
A + +E I KGL+P T
Sbjct: 654 DLAHTFLLENISKGLVPSFTT 674
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 17/294 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +T + +C R A R L M +G E N V+Y +++G +
Sbjct: 144 PDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYK---------- 193
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A +FDEM +GI PD+ +F+ ++HV + Q S + + ++G+CP + T
Sbjct: 194 ENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFT 253
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN---CFFKEYRGRKDANGAMKLYR 178
+ ++ LC G I++A LL +V G++P +YN C F ++ +A + Y
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEA----ECYL 309
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ PN TYN +I F M +I D +Y+ LI+GLC
Sbjct: 310 HKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCND 369
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A F E +EKG + + TL +GL + ++ +L K + E +
Sbjct: 370 GDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS 423
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 120/254 (47%), Gaps = 12/254 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+SLI G C ++ A E +E+G + +++ YN L+ G+ ++
Sbjct: 353 IPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQG------- 405
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++ +M G PD+ ++++V++ + + LN KG P +
Sbjct: 406 ---LVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIF 462
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ +++ C ++ A E+L M+ +G++P TYN + + + ++ M
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAM 522
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E C PNI TYNILI F ++ E++ +K L D+ + LI GLC +
Sbjct: 523 LEKG-CTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581
Query: 241 WKEACQYFVEMIEK 254
+A + FV IEK
Sbjct: 582 LDKAYELFV-TIEK 594
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 11/277 (3%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y ++ + + ++ A M EP+V +YN ++N +
Sbjct: 78 VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYF---------- 127
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
A KV+ M+ GI PDV + +I + + +P +L LN M +G +Y +V
Sbjct: 128 SQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAV 187
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ +A L EM++ G+ P T+N + + + KL+ ++ + +
Sbjct: 188 ISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGV 247
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
C PN+ T+NI I +D + + L D+ SY LI G C+ K EA
Sbjct: 248 C-PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAE 306
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
Y +M+ G+ P + T+ T+ G ++ M++ ++
Sbjct: 307 CYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI 343
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 48/234 (20%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHV------YSRAHKPQLSLDKLNFMKEKGICPT 118
++ A VF+ M EP V S++ ++++ +S+AHK + MK+ GI P
Sbjct: 92 VQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR------MKDIGIYPD 145
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V T+T +K C GR A LL M G +A +Y + A L+
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFD 205
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M + +C P+I T+N LIH LC+K
Sbjct: 206 EMLKQGIC-PDILTFN-----------------------------------KLIHVLCKK 229
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+E+ + F +++++G+ P TF +GL + + RL + + E +T
Sbjct: 230 GNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT 283
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 101/229 (44%), Gaps = 3/229 (1%)
Query: 60 RFEKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
R++ NA K+F++++ G + + ++ ++ K + D L M++
Sbjct: 15 RYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKM 74
Query: 119 V-ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ Y +++ G++++A + M PS ++YN + A K+Y
Sbjct: 75 LEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVY 134
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+MK+ + P+++T+ I + F R + N++ G + SY +I G +
Sbjct: 135 MRMKDIGI-YPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYK 193
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ EA F EM+++G+ P +TF L L + ++ +L K+
Sbjct: 194 ENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 144/295 (48%), Gaps = 26/295 (8%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---------- 56
Y +LI G CK +++ + GEM+++G+EP+ TYN+L++G+CR L
Sbjct: 529 YNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK 588
Query: 57 -----PN--------ERFEKT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
PN + + K I EK+F E+ + +E + ++ ++ Y R
Sbjct: 589 SRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTV 648
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
+ + M+ KGI PT ATY+S++ +C+ GR+EDA+ L+ EM + G+ P+ Y
Sbjct: 649 EAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALI 708
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
Y + + + ++M D+ PN TY ++I + M ++ + + G +
Sbjct: 709 GGYCKLGQMDKVVNVLQEMSSYDI-HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGI 767
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
D +Y +L +G C++ K +E + M ++GL ++T+ TL G Q L
Sbjct: 768 VPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSAL 822
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 143/323 (44%), Gaps = 44/323 (13%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ +LI+G CK + A R L +M+ERG + +TYN L++G C+ E
Sbjct: 490 NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCK----------E 539
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ K+ EM +GIEPD ++++++H R K +++ N K + + P V TY
Sbjct: 540 GKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTY 599
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK- 181
++ C +IE+ E+L E++ + ++ YN + Y + A KL+ M+
Sbjct: 600 GVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRS 659
Query: 182 -----------------------EDDLCV----------PNIHTYNILIGMFMALNRMDM 208
ED C+ PN+ Y LIG + L +MD
Sbjct: 660 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 719
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
V + + ++ + +YT++I G + K A + EM+ KG++P VT+ L
Sbjct: 720 VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTN 779
Query: 269 GLIQSDMLRTWRRLKKKLDEESI 291
G + + ++ + +E +
Sbjct: 780 GFCKEGKIEEGFKICDYMSQEGL 802
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI+G CK +D A RF +M++ GV ++TY+VL+NG+ + E+F
Sbjct: 279 PNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKL------EKF 332
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A V E +G P+ ++ ++ Y + +L M KGI P T
Sbjct: 333 NE----ANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVT 388
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
S+++ C G++E AE +L EM+ G S + + A++ R+M
Sbjct: 389 LNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML 448
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ PN L+G + E+W + G +L + LIHGLC+
Sbjct: 449 LRNM-RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 507
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+EA + +M+E+G + K+T+ TL G + + +L+ ++ ++ I
Sbjct: 508 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGI 557
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 137/306 (44%), Gaps = 11/306 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +Y +LI G+CK+ + A R G+M+ +G+ PN VT N ++ G C+ +
Sbjct: 349 PNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQM------ 402
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE + +EM RG + +F+ ++H + + +L L M + + P
Sbjct: 403 ----EQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGL 458
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T++V LC G+ DA EL ++ G + T N + A++L ++M
Sbjct: 459 LTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKML 518
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + I TYN LI +++ ++ + + D +Y +LIHG+C K
Sbjct: 519 ERGFVLDKI-TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKL 577
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
EA + E + L+P T+ + G ++D + +L +L +++ S N
Sbjct: 578 DEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTL 637
Query: 302 FKPYRR 307
+ Y R
Sbjct: 638 IRAYCR 643
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 133/292 (45%), Gaps = 24/292 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P VK T L+ K N ++ + ++ E + +GV P+V ++ +N C+
Sbjct: 210 PTVKTCTFLLSSLVKANELEKS-YWVFETMRQGVSPDVYLFSTAINAFCKGGK------- 261
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK----GICP 117
+ +A ++F +M G+ P+V +++ ++H + +LD+ KEK G+
Sbjct: 262 ---VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCK----HGNLDEAFRFKEKMVKDGVNA 314
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T+ TY+ ++ L + +A +L E + G +P+ YN Y + A+++
Sbjct: 315 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 374
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
M + PN T N +I F + +M+ I + ++ ++T +IH LC
Sbjct: 375 GDMVSKGI-NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCM 433
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK 285
+++ A ++ EM+ + + P TL GL + SD + W RL +K
Sbjct: 434 NSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK 485
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 26/222 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------ 54
+PNV Y +I G+CK ++I+ E+ E++ + +E N V YN L+ CR +
Sbjct: 593 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK 652
Query: 55 LHPNERFEKT-------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
LH + R + + +A+ + DEMR G+ P+V ++ ++ Y
Sbjct: 653 LHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYC 712
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + ++ L M I P TYT ++ G ++ A +LL EMV G+ P
Sbjct: 713 KLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTV 772
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
TYN + K+ M ++ L + I TY L+
Sbjct: 773 TYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEI-TYTTLV 813
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 94/231 (40%), Gaps = 42/231 (18%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP---QLSLDKLNFMKEKGICPTVAT 121
I +A +E+ G+ V + +++HVY + + ++ F+ KG+ PTV T
Sbjct: 157 IASAMADLNEVGESGVA--VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKT 214
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T ++ L +E + + E +R GVSP ++ + A++L+ M+
Sbjct: 215 CTFLLSSLVKANELEKSYWVF-ETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDME 273
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN+ TYN LIHGLC+
Sbjct: 274 KLGVS-PNVVTYN-----------------------------------NLIHGLCKHGNL 297
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EA ++ +M++ G+ +T+ L GL++ + + K+ E+ T
Sbjct: 298 DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFT 348
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 128/256 (50%), Gaps = 14/256 (5%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G +P + +YN LLN A + N+ E AE F G+ P++ +++I++ +
Sbjct: 84 GCQPGIRSYNSLLN-----ALIESNKWDE-----AESFFLYFETMGLSPNLQTYNILIKI 133
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
R + + + LN+M +G P V +Y +++ L G + DA +L EM GV+P
Sbjct: 134 SCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPD 193
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
YN + + D A +++ ++ + PNI +YN++I + D EIW
Sbjct: 194 VACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIW 253
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ +K +E G DL +Y+ LIHGLC A + + EM E G+ P V + T+ G +++
Sbjct: 254 HRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRA 313
Query: 274 ----DMLRTWRRLKKK 285
+ L W+ ++K+
Sbjct: 314 GRIEECLELWKVMEKE 329
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 130/265 (49%), Gaps = 11/265 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+S+I G C+ R+D L +M + G +PN N ++NG R + L RF
Sbjct: 407 YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRF----- 461
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
F M +G P V +++ +++ S+A + + + M +KG P + TY+ ++
Sbjct: 462 -----FGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLM 516
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC +++ A L + + G P + +N A++LY +MK+ + C
Sbjct: 517 NGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRN-C 575
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VPN+ T+N L+ F + + +IW+H+ L D+ SY + + GLC + +A
Sbjct: 576 VPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVG 635
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLI 271
+ + +++G+LP +T+ L +G +
Sbjct: 636 FLNDAVDRGVLPTAITWNILVQGYL 660
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 40/307 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
P ++ Y SL+ + N+ D AE F G+ PN+ TYN+L+ CR+
Sbjct: 87 PGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKEL 146
Query: 53 ------ASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P+ T+ N A K+FDEM RG+ PDV ++I++ + +
Sbjct: 147 LNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFK 206
Query: 97 AHKPQLSLDKLN-------FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
D LN +K + P + +Y ++ LC CG+ +++ E+ M +N
Sbjct: 207 KG------DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 260
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
TY+ G + +GA ++Y++M E+ + P++ YN ++ ++ R++
Sbjct: 261 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS-PDVVVYNTMLNGYLRAGRIEEC 319
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
E+W V E + SY +LI GL E K EA + + EK +T+ L G
Sbjct: 320 LELWK-VMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHG 378
Query: 270 LIQSDML 276
L ++ L
Sbjct: 379 LCKNGYL 385
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 130/309 (42%), Gaps = 33/309 (10%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------------- 51
Y++LI+G C +D A R EM E GV P+VV YN +LNG R
Sbjct: 268 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 327
Query: 52 ----RASLHPNERFEKTIRNAEKVFDEMRVRGIEP------DVTSFSIVLHVYSRAHKPQ 101
R + N NA KV + + + + P D ++ +++H +
Sbjct: 328 KEGCRTVVSYNILIRGLFENA-KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN 386
Query: 102 LSLDKLNFMKE-KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
+L L + +G T A Y+S++ LC GR+++ +L +M ++G P+ N
Sbjct: 387 KALSILEEAENGRGDLDTFA-YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAV 445
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
+ A++ + M C P + TYN LI R + +
Sbjct: 446 INGFVRASKLEDALRFFGNMVSKG-CFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKG 504
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DML 276
++ +Y++L++GLC+ +K A + + +EKG P + GL S D L
Sbjct: 505 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 564
Query: 277 RTWRRLKKK 285
+ + +K++
Sbjct: 565 QLYSEMKQR 573
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 141/355 (39%), Gaps = 81/355 (22%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI K + A + EM ERGV P+V YN+L++G ++
Sbjct: 157 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGD------- 209
Query: 62 EKTIRNAEKVFDEM-RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I NA ++++ + + + P++ S++++++ + K S + + MK+ +
Sbjct: 210 ---ILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY 266
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY---------------- 164
TY++++ LC G ++ A + EM NGVSP YN Y
Sbjct: 267 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 326
Query: 165 ---------------RG---RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
RG + A+ ++ + E D C ++ TY +L+ +
Sbjct: 327 EKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSM-TYGVLVHGLCKNGYL 385
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEK---------------------------- 238
+ I + LD +Y+ +I+GLC +
Sbjct: 386 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAV 445
Query: 239 -------QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
K ++A ++F M+ KG P VT+ TL GL +++ L K++
Sbjct: 446 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 500
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 87/167 (52%), Gaps = 10/167 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y+ L+ G C+ ++DMA + +E+G +P+V +N++++G+C
Sbjct: 507 PNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK------- 559
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A +++ EM+ R P++ + + ++ + + + + + + + G+ P + +
Sbjct: 560 ---VEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIIS 616
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168
Y +K LCSC RI DA L + V GV P+A T+N + Y K
Sbjct: 617 YNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALK 663
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 58/120 (48%)
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A+ ++++M E C P I +YN L+ + N+ D + + + L +L +Y +LI
Sbjct: 72 ALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILI 131
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
C K+++ +A + M +G P ++ TL L ++ + +L ++ E +T
Sbjct: 132 KISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVT 191
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ + +L+ G+ K+ + A + +++ G++P++++YN+ L G+C S H
Sbjct: 576 VPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLC---SCH---- 628
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
I +A ++ RG+ P +++I++ Y
Sbjct: 629 ---RISDAVGFLNDAVDRGVLPTAITWNILVQGY 659
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 150/334 (44%), Gaps = 61/334 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y SL+ G+CK + A G++ G+ P V+TYN+L++G CR L R
Sbjct: 376 PDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRL 435
Query: 62 EK-------------------------TIRNAEKVFDEMRVRGIEPDVTSFS------IV 90
++ ++ A + FDEM +G++PD +++ +
Sbjct: 436 KEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELT 495
Query: 91 LHVYSRAHKPQ-------LSLDKLNF----------------------MKEKGICPTVAT 121
L ++A + + +S D + + M G+ P T
Sbjct: 496 LGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCIT 555
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ C G + +A + +M+ +G++PSA TY F Y R + A +R+M
Sbjct: 556 YTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKML 615
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ + PN TYN+LI R + ++ + L + +YT+LI G C++ W
Sbjct: 616 EEGV-EPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNW 674
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
++A +++ EM + G+ P +T + L++G + M
Sbjct: 675 EDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGHM 708
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 136/291 (46%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP V Y ++I+G + +++ A+ EM G++P+V+TYN LLNG C+ SL
Sbjct: 340 MPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSL----- 394
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A +F ++R G+ P V +++I++ Y R + + M E+G P V
Sbjct: 395 -----KEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVC 449
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++K + + A E EM+ G+ P YN + A +L M
Sbjct: 450 TYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVM 509
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + + TYNILI ++ +++ + + L D +YT LIH CE+
Sbjct: 510 MLEGISSDTV-TYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGL 568
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+EA ++F +MI GL P VT+ + L + +K+ EE +
Sbjct: 569 LREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGV 619
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 124/286 (43%), Gaps = 11/286 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI G + A+ EM G+ P VVTYN +++G+ + +
Sbjct: 311 YNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQ----------VE 360
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A+ F EMR G++PDV +++ +L+ Y +A + +L ++ G+ PTV TY ++
Sbjct: 361 AAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILI 420
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G +E+A L EMV G P TY K A + + +M L
Sbjct: 421 DGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGL- 479
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+ YN I + L + + + + D +Y +LI GLC+ +A
Sbjct: 480 QPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKD 539
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
++M+ GL P +T+ L + +LR R+ K + + +
Sbjct: 540 LQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLA 585
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 130/294 (44%), Gaps = 16/294 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVE--PNVVTYNVLLNGVCRRASLHPNE 59
P++ Y +L+ + K R D L EM RG PN VT+NV++ G+ R+ L
Sbjct: 235 PSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDL---- 290
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF-MKEKGICPT 118
A ++ + MR+ T ++ + ++ + D L M+ +GI PT
Sbjct: 291 ------EEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKA--DDLQLEMENEGIMPT 342
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V TY +++ L G++E A+ EM G+ P TYN Y A+ L+
Sbjct: 343 VVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFG 402
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
++ L P + TYNILI + L ++ R + + D+ +YT+L+ G
Sbjct: 403 DLRHAGL-APTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNA 461
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A ++F EM+ KGL P + T R + + RL++ + E I+
Sbjct: 462 CSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGIS 515
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 80/176 (45%), Gaps = 8/176 (4%)
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
L L + M G+ P V V++ L R +D + EM++ G+ PS TYN
Sbjct: 185 LCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLL 244
Query: 162 KEY--RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
+ GR D AM L C+PN T+N++I L R + E V+G
Sbjct: 245 DSFLKEGRND-KVAMLLKEMETRGSGCLPNDVTHNVVI---TGLARKGDLEEAAEMVEGM 300
Query: 220 ELGLDLDSYTM--LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
L S+T LI GL K K+A +EM +G++P VT+ + GL+QS
Sbjct: 301 RLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQS 356
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YT LI G CK + A RF EM + G+ P+ +T+ L G H E
Sbjct: 655 VPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGHMNHAIEY 714
Query: 61 FEKTI 65
E +
Sbjct: 715 LENAV 719
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 129/274 (47%), Gaps = 16/274 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +Y +LI+ C+ NR+ A + L +M EP+V T+N +++G+CR +H
Sbjct: 237 VPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIH---- 292
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+ D M +RG D ++ ++H R + +D+ + K P
Sbjct: 293 ------EAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQ----VDEARALLNKIPNPNTV 342
Query: 121 TYTSVVKCLCSCGRIEDAEELL-GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++ + GR E+A++LL MV G P A T+N + A++L +
Sbjct: 343 LYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNE 402
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M PN+ TY ILI F R++ EI N + L L+ Y LI LC+
Sbjct: 403 MVAKRF-EPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDG 461
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+EA Q F EM KG P TF +L GL ++
Sbjct: 462 NIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKN 495
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +I G K + A L EM+ + EPNV+TY +L+NG C++ L
Sbjct: 375 PDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRL------ 428
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ + M +G+ + ++ ++ + + +L M KG P + T
Sbjct: 429 ----EEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYT 484
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++ LC ++E+A L +M GV + TYN + R A KL +M
Sbjct: 485 FNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEML 544
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ NI TYN LI ++ ++ + G + + S +LI GLC K
Sbjct: 545 FRGCPLDNI-TYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKV 603
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+A ++ +MI +GL P VT+ +L GL + ++ L KL E I
Sbjct: 604 NDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGI 653
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 124/270 (45%), Gaps = 11/270 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y LI CK I+ A + GEM +G +P++ T+N L+NG+C+ N + E
Sbjct: 446 NTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCK------NHKME 499
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ + ++ +M + G+ + +++ ++H + Q + ++ M +G TY
Sbjct: 500 EAL----SLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITY 555
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++K LC G +E L EM+ G+ P+ + N N A+K + M
Sbjct: 556 NGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIH 615
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L P+I TYN LI + + ++N ++ + D +Y LI C + +
Sbjct: 616 RGL-TPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFN 674
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+AC + ++ G +P +VT+ L +++
Sbjct: 675 DACLLLYKGVDSGFIPNEVTWSILINYIVK 704
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 8/232 (3%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+ D V +P S+++VL + P+++ + M +G+ PTV T+ V+K LC
Sbjct: 157 LLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALC 216
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
++ A LL +M ++G P++ Y + A++L M C P++
Sbjct: 217 MVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFL-MCCEPDV 275
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
T+N +I R+ ++ + + D +Y L+HGLC + EA
Sbjct: 276 QTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEA----RA 331
Query: 251 MIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
++ K P V + TL G + S + K L + G E Y F
Sbjct: 332 LLNKIPNPNTVLYNTLISGYVASG---RFEEAKDLLYNNMVIAGYEPDAYTF 380
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 114/300 (38%), Gaps = 59/300 (19%)
Query: 36 EPNVVTYNVLLN----GVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
+P +YNV+L+ G C R + PN VF +M RG+ P V +F +V+
Sbjct: 167 DPTFKSYNVVLDILVDGDCPRVA--PN------------VFYDMLSRGVSPTVYTFGVVM 212
Query: 92 HVYSRAHKPQLSLDKLNFMKEKG--------------IC--------------------- 116
+ + L M + G +C
Sbjct: 213 KALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCE 272
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P V T+ V+ LC GRI +A +LL M+ G S A TY + A L
Sbjct: 273 PDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARAL 332
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE-IWNHVKGSELGLDLDSYTMLIHGL 235
++ PN YN LI ++A R + ++ ++N++ + D ++ ++I GL
Sbjct: 333 LNKIPN-----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGL 387
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
+K A + EM+ K P +T+ L G + L + + + ++ +
Sbjct: 388 VKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNT 447
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 6/221 (2%)
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVATYTSVVK 127
EK+ +M+ G+ + F +++ Y +A P + L M C PT +Y V+
Sbjct: 119 EKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLD 178
Query: 128 CLCS--CGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
L C R+ A + +M+ GVSP+ T+ K + + A L R M +
Sbjct: 179 ILVDGDCPRV--APNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHG- 235
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
CVPN Y LI NR+ ++ + D+ ++ +IHGLC + EA
Sbjct: 236 CVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAA 295
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ M+ +G +T+ L GL + + R L K+
Sbjct: 296 KLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI 336
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + LI G C+ +++ A +FL +MI RG+ P++VTYN L+NG+C+
Sbjct: 585 PTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGH------- 637
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
++ A +F++++ GI PD +++ ++
Sbjct: 638 ---VQEASNLFNKLQSEGIRPDAITYNTLI 664
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA 53
P++ Y SLI G CK+ + A ++ G+ P+ +TYN L++ C
Sbjct: 620 PDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEG 671
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 23/305 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+ + SLI G+C+ N++D+A +M RG +VV+Y L+ G+C
Sbjct: 8 PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 67
Query: 52 -----RASLHPNERFEKTIRNAEK------VFDEMRVRGIEPDVTSFSIVLHVYSRAHKP 100
+ +H K + NAE+ + M+ G P +++ V+ R K
Sbjct: 68 FGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKA 127
Query: 101 QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
+ + + L M EKG+ P V T T+V+ C GR+ DA +L M G P+ TYN
Sbjct: 128 KEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNAL 187
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
+ + + AM L +M+ + P+ TYN+LI ++ + ++G
Sbjct: 188 VQGFCNEGKVHKAMTLLNKMRACGV-NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 246
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR-TW 279
L D +Y LI+ LC+ + +AC F + +G+ P VTF +L GL +S W
Sbjct: 247 LIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAW 306
Query: 280 RRLKK 284
+ L+K
Sbjct: 307 KFLEK 311
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 137/303 (45%), Gaps = 22/303 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ MY +L+ G C R + L M E G P+ Y +++ CR
Sbjct: 74 PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCR---------- 123
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + AE++ EM +G+ P V + + V++ Y + + +L L MK +G P V T
Sbjct: 124 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWT 183
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V+ C+ G++ A LL +M GV+P A TYN + A +L R M+
Sbjct: 184 YNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 243
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D L + + +TYN LI R D +++ ++ + + ++ LI+GLC+ K
Sbjct: 244 GDGL-IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 302
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
A ++ +M+ G P T+ + L K K +E ++F E
Sbjct: 303 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLC-----------KMKGSQEGLSFIGEMLQKD 351
Query: 302 FKP 304
KP
Sbjct: 352 VKP 354
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 129/321 (40%), Gaps = 61/321 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + SLI G CK + D+A +FL +M+ G P+ TY+ + +C+ F
Sbjct: 284 PNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSF 343
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EM + ++P +++IV+H + L M G P V T
Sbjct: 344 ----------IGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 393
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+ ++ C GR+ +AE +L EM +NGV+ YN + + A+ + +QM
Sbjct: 394 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 453
Query: 182 ------------------------EDDL---------------------------CVPNI 190
ED L +PN
Sbjct: 454 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 513
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
TY+ ++ F R + + + +K + L+ D YT L+ C+ +++ +A
Sbjct: 514 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCS 573
Query: 251 MIEKGLLPQKVTFETLYRGLI 271
MI+ G +PQ ++++ L GLI
Sbjct: 574 MIQHGFIPQLMSYQHLLSGLI 594
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 19/272 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V T++I +CK R+ A R L M RG +PNV TYN L+ G C +H
Sbjct: 144 PCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH----- 198
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++MR G+ PD ++++++ + + L M+ G+ T
Sbjct: 199 -----KAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 253
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GR + A L + G+ P+A T+N A+ A K +M
Sbjct: 254 YNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV 313
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD----SYTMLIHGLCE 237
C P+ +TY+ I L +M +E + + G L D+ +YT++IH L +
Sbjct: 314 SAG-CTPDTYTYSSFIE---HLCKMKGSQEGLSFI-GEMLQKDVKPSTVNYTIVIHKLLK 368
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ + + + EM+ G P VT+ T R
Sbjct: 369 ERNYGLVARTWGEMVSSGCNPDVVTYTTSMRA 400
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 122/296 (41%), Gaps = 26/296 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +L+ G+C ++ A L +M GV P+ VTYN+L+ G C + R
Sbjct: 179 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL 238
Query: 62 EKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ + A +FD + RGI+P+ +F+ +++ +
Sbjct: 239 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 298
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ K ++ L M G P TY+S ++ LC ++ +GEM++ V PS
Sbjct: 299 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 358
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + ++ + + +M C P++ TY + + R++ + +
Sbjct: 359 YTIVIHKLLKERNYGLVARTWGEMVSSG-CNPDVVTYTTSMRAYCIEGRLNEAENVLMEM 417
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ + +D +Y L+ G + A +M +P + T+ L R L++
Sbjct: 418 SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVR 473
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 34/223 (15%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G PD +F+ ++ Y R ++ ++ D + M +G V +Y ++++ LC GRI++A
Sbjct: 5 GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64
Query: 139 EELLGEMVRN-------------------------------GVSPSAETYNCFFKEYRGR 167
EL GEM + G PS Y ++R R
Sbjct: 65 VELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVV-DFRCR 123
Query: 168 -KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
+ A A ++ ++M E L P + T +I + RM + +K ++
Sbjct: 124 ERKAKEAEEMLQEMFEKGL-APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVW 182
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+Y L+ G C + K +A +M G+ P VT+ L RG
Sbjct: 183 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRG 225
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 143/315 (45%), Gaps = 25/315 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PN+ YT LI C +++ A LG+M+E+G+ PNV+TYN L+NG C+R
Sbjct: 356 PNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDV 415
Query: 54 -------SLHPNERF---------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+L PN R ++ + A V ++M R + PDV +++ ++ R+
Sbjct: 416 VELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ L+ M ++G+ P TYTS++ LC R+E+A +L + + V P+ Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMY 535
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
Y N A + +M + C+PN T+N LI ++ + +
Sbjct: 536 TALIDGYCKAGKVNEAHLMLEKMLSKN-CLPNSLTFNALIHGLCTDGKLKEATLLEEKMV 594
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+L + + T+LIH L + + A + F +M+ G P T+ T + + L+
Sbjct: 595 KIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQ 654
Query: 278 TWRRLKKKLDEESIT 292
+ K+ E ++
Sbjct: 655 DAEDMVAKMKENGVS 669
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 142/291 (48%), Gaps = 12/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y ++ G+CK+ ++ A +++ ++E G++P+ TY L+ G C+R
Sbjct: 216 PNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQR--------- 266
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + +A KVF EM ++G + +++ ++H + ++D MK+ PTV T
Sbjct: 267 -KDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRT 325
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++K LC R +A L+ EM G+ P+ TY + A +L QM
Sbjct: 326 YTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQML 385
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L +PN+ TYN LI + ++ ++ ++ L + +Y LI G C++
Sbjct: 386 EKGL-MPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVH 444
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
K A +M+E+ +LP VT+ +L G +S + RL +++ +
Sbjct: 445 K-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 136/282 (48%), Gaps = 28/282 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV MYT+LI G+CK +++ A L +M+ + PN +T+N L++G+C L
Sbjct: 529 IPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKL----- 583
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A + ++M ++P V++ +I++H + + + M G P
Sbjct: 584 -----KEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAH 638
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+ ++ C GR++DAE+++ +M NGVSP TY+ K Y N A + ++M
Sbjct: 639 TYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRM 698
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D C P+ HT+ LI + + + VKG E G+ + S M +
Sbjct: 699 -HDTGCEPSQHTFLSLIKHLLEMK--------YGKVKGGEPGVCVMSNMM---------E 740
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ + +M+E G+ P ++E L G+ + LR ++
Sbjct: 741 FDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKV 782
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 34/201 (16%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M E +CP + TY +V C G +E+A + + +V G+ P TY Y RKD
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 170 ANGAMKLYRQMK----------------------------------EDDLCVPNIHTYNI 195
+ A K++++M +DD C P + TY +
Sbjct: 269 LDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTV 328
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
LI R + ++ + ++ +YT+LI LC + K ++A + +M+EKG
Sbjct: 329 LIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKG 388
Query: 256 LLPQKVTFETLYRGLIQSDML 276
L+P +T+ L G + M+
Sbjct: 389 LMPNVITYNALINGYCKRGMI 409
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ Y +++ L G +++ +++ EM+ + V P+ TYN Y + A +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ E L P+ TY LI + +D +++ + + +YT LIHGLC +
Sbjct: 243 MIVEAGL-DPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVE 301
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++ EA FV+M + P T+ L + L S+ L K+++E+ I
Sbjct: 302 RRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGI 354
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNER 60
PN K Y L+ G C+I + +AE+ M ++ G+ P+ + +N LL+ C +
Sbjct: 758 PNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCC---------K 808
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL-HVYSRAHKPQLSLDKLNFMKEKGICPTV 119
EK A KV D+M G P + S I++ +Y + K + + N + + G
Sbjct: 809 LEKH-NEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLL-QCGYYDDE 866
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
+ ++ + G +E EL M +NG + S++TY+
Sbjct: 867 LAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYS 905
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 149/316 (47%), Gaps = 26/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV----CRRASLHP 57
PNV +YT+LI G CK I+ ++ +M E V N TY VL+NG ++ +
Sbjct: 197 PNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIEL 256
Query: 58 NERFEKT---------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E+ + T + NA ++FDEMR RG+ +V +++ ++ +
Sbjct: 257 YEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQ 316
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + MK G+ P + +Y +++ CS G ++ A L +M +G SPS T
Sbjct: 317 ERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLAT 376
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + K++ G + R+M+ L P+ TY IL+ + + ++ +I++ +
Sbjct: 377 YNILIAGFSEAKNSAGVTDMVREMEARGLS-PSKVTYTILMDALVRSDNIEKAFQIYSSM 435
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + L D+ Y +LIHGLC KEA + F + E L P V + T+ G +
Sbjct: 436 EKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSS 495
Query: 277 RTWRRLKKKLDEESIT 292
RL K++ E +
Sbjct: 496 YRALRLLKEMGENGMV 511
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 11/272 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V + +I G C++ +D LG+M E G+ PNVV Y L++G C+
Sbjct: 163 DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGD-------- 214
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I +++F +M + + +++++++ + + + ++ MK GI P V TY
Sbjct: 215 --IERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 272
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S++ C+ G++ +A EL EM GV+ + TYN + A +L +MK
Sbjct: 273 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 332
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D L PN+ +YN LI + ++ +D ++N +K S L +Y +LI G E +
Sbjct: 333 DGLS-PNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSA 391
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EM +GL P KVT+ L L++SD
Sbjct: 392 GVTDMVREMEARGLSPSKVTYTILMDALVRSD 423
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 11/265 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y S+I C +++ A EM ERGV NVVTYN L+ G+C+
Sbjct: 266 VPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQ--------- 316
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ + AE++ M+ G+ P++ S++ ++ Y + N MK G P++A
Sbjct: 317 -ERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLA 375
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ +++ EM G+SPS TY + A ++Y M
Sbjct: 376 TYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSM 435
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L V +I+ Y +LI + M +++ + L + Y +I+G C++
Sbjct: 436 EKAGL-VADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGS 494
Query: 241 WKEACQYFVEMIEKGLLPQKVTFET 265
A + EM E G++P ++ +
Sbjct: 495 SYRALRLLKEMGENGMVPNVASYNS 519
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 11/257 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y +LI G C+ R+ AER + M G+ PN+++YN L++G C +L
Sbjct: 303 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLD------ 356
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A +F++M+ G P + +++I++ +S A D + M+ +G+ P+ TY
Sbjct: 357 ----KASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTY 412
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++ L IE A ++ M + G+ Y D A KL++ + E
Sbjct: 413 TILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDE 472
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L PN YN +I + + + + + ++ SY I LC+ +KW
Sbjct: 473 MHL-KPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWT 531
Query: 243 EACQYFVEMIEKGLLPQ 259
EA +MIE GL P
Sbjct: 532 EAEVLLKDMIELGLKPS 548
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 126/267 (47%), Gaps = 12/267 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V ++ ++I + + A + +MI RG+ P T+N LL L + FE
Sbjct: 94 HVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLL------ILLIKSNFFE 147
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K A +VF+E + ++ DV SF I++ + L M+E G+ P V Y
Sbjct: 148 K----AWRVFNETK-GNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVY 202
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ C G IE ++L +M V + TY + ++LY +MK
Sbjct: 203 TTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKL 262
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ VPN++TYN +I +++ E+++ ++ + ++ +Y LI GLC++++
Sbjct: 263 TGI-VPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVL 321
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRG 269
EA + M GL P +++ TL G
Sbjct: 322 EAERLMCRMKRDGLSPNLISYNTLIDG 348
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 2/221 (0%)
Query: 72 FDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCS 131
F++M RG+ P +F+ +L + +++ + + N K + V ++ ++K C
Sbjct: 118 FNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETK-GNVKLDVYSFGIMIKGCCE 176
Query: 132 CGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIH 191
G ++ E+LG+M G+SP+ Y D +L+ +M E D+ V N +
Sbjct: 177 VGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDV-VANQY 235
Query: 192 TYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251
TY +LI F + E++ +K + + ++ +Y +I C K A + F EM
Sbjct: 236 TYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM 295
Query: 252 IEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
E+G+ VT+ TL GL Q + RL ++ + ++
Sbjct: 296 RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS 336
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT L+ + + I+ A + M + G+ ++ Y VL++G+C +
Sbjct: 407 PSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDM------ 460
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+F + ++P+ ++ +++ Y + +L L M E G+ P VA+
Sbjct: 461 ----KEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVAS 516
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
Y S ++ LC + +AE LL +M+ G+ PS +N K
Sbjct: 517 YNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISK 557
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 140/298 (46%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ +++SL+YG C I++ + E EM+ G+ PN+V +N +L +C+
Sbjct: 98 PNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCK---------- 147
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +++ D + G+ PDV S++ ++ + A + L M G+ P +
Sbjct: 148 EGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFS 207
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C GRI+ A L +M+ NG++P TYN K + A +LY M
Sbjct: 208 YNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMI 267
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
I+TYN ++ N +D +++ + L L++ ++T++I L + +
Sbjct: 268 NSG-TKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 326
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
++A F + GL+P VT+ + LI+ L + L +++ S+ N
Sbjct: 327 EDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLN 384
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 134/301 (44%), Gaps = 36/301 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE-R 60
PN ++ + K ID A +M + G+ P+ V+Y L++ +C+ + E +
Sbjct: 28 PNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVK 87
Query: 61 FEKTIRNA------------------------EKVFDEMRVRGIEPDVTSFSIVLHVY-- 94
F + I E++F EM GI P++ F+ +L
Sbjct: 88 FNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCK 147
Query: 95 -SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
R + Q +D + M G+ P V +Y +++ C G I++A +LL MV G+ P+
Sbjct: 148 EGRVMEGQRLVDSIECM---GVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPN 204
Query: 154 AETYNCFFKEY--RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
+ +YN Y GR D+ A L+R+M + + P + TYN ++ R +E
Sbjct: 205 SFSYNTLLHGYCKAGRIDS--AYSLFRKMLSNGI-TPGVVTYNTILHGLFQTKRFSEAKE 261
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
++ ++ S + +Y +++GLC+ EA + F + KGL +TF + L+
Sbjct: 262 LYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 321
Query: 272 Q 272
+
Sbjct: 322 K 322
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 17/276 (6%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
+++G+ + L M+ G+ PN +N+ + + I A
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCG----------MIDKAM 50
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+F++MR G+ PD S+ ++ + + + K N M +G+ P + ++S+V L
Sbjct: 51 DIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGL 110
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV-- 187
CS + E EEL EM+ G+ P+ FF G + +++ + C+
Sbjct: 111 CSIDKWEKVEELFFEMLNVGIHPNI----VFFNTILCNLCKEGRVMEGQRLVDSIECMGV 166
Query: 188 -PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++ +YN LI +D ++ + L + SY L+HG C+ + A
Sbjct: 167 RPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYS 226
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
F +M+ G+ P VT+ T+ GL Q+ + L
Sbjct: 227 LFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKEL 262
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 38/230 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +L++G+CK RID A +M+ G+ P VVTYN +L+G L +RF
Sbjct: 203 PNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHG------LFQTKRF 256
Query: 62 EK---------------------TIRN----------AEKVFDEMRVRGIEPDVTSFSIV 90
+ TI N A K+F + +G++ ++ +F+I+
Sbjct: 257 SEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIM 316
Query: 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+ + + + ++D + G+ P V TY V + L G +E+ + L M +NG
Sbjct: 317 IGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGT 376
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
+P+++ N + R D + A ++ E + V T ++LI +F
Sbjct: 377 APNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVE-ASTTSMLISIF 425
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 1/224 (0%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+ + M GI P+ F+I Y++ ++D N M++ G+ P +Y +++ LC
Sbjct: 17 LLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALC 76
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
GR++DAE +M+ GV+P+ ++ +L+ +M + PNI
Sbjct: 77 KLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIH-PNI 135
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
+N ++ R+ + + + ++ + D+ SY LI G C EA +
Sbjct: 136 VFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEG 195
Query: 251 MIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
M+ GL P ++ TL G ++ + + L +K+ IT G
Sbjct: 196 MVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPG 239
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 133/264 (50%), Gaps = 11/264 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ +LI+G C+ N + A + L M++ GVE + +TYN+++ C+ + + E
Sbjct: 461 NIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKAS------KME 514
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ I ++ D+M RG +PD+ +F+ L Y K + L L+ MK +G+ P + TY
Sbjct: 515 EAI----QLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTY 570
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C + A + L E+++NG+ P+A YN Y + A+ + MK
Sbjct: 571 GTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKH 630
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ + P TYN L+ ++ +EI+ + L + YT++I G C+ K
Sbjct: 631 NGI-QPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKID 689
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
EA YF EM + + P K+T+ TL
Sbjct: 690 EAVMYFKEMHYRDIRPNKMTYTTL 713
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 140/331 (42%), Gaps = 42/331 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT +I C+ ID A L E+ G++P VVTYNVL++ +CR + E F
Sbjct: 214 PDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVE--EAF 271
Query: 62 EKTIRNAE---------------------------KVFDEMRVRGIEPDVTSFSIVLHVY 94
+ R E V EM GI P+ ++ ++ +
Sbjct: 272 QLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWH 331
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
R +L + M KGI TV TY + K LC G +E AE++L EM+ G++
Sbjct: 332 CREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHC 391
Query: 155 ETYNCFFK-EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
+N RG + ++L R+M L PN I + + EIW
Sbjct: 392 SLFNSVVAWHLRGTGRLDVVLRLIREMVARFL-KPNDAVMTACIQELCKRGKHEEAAEIW 450
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
V G LG+++ + LIHGLC+ KEA + M++ G+ ++T+ + + ++
Sbjct: 451 FLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKA 510
Query: 274 DMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
+ EE+I + FKP
Sbjct: 511 SKM-----------EEAIQLRDDMIKRGFKP 530
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 113/250 (45%), Gaps = 11/250 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + + + +C + +++ L +M G++P++VTY +++G C+ +H
Sbjct: 530 PDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVH----- 584
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K E+ G+ P+ ++ ++ Y R ++ L+ MK GI PT T
Sbjct: 585 -----KANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPIT 639
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ +C G +E+A+E+ + + + Y + + + A+ +++M
Sbjct: 640 YNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMH 699
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D+ PN TY L+ + + ++++ + S + D SY LI G CE
Sbjct: 700 YRDI-RPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSL 758
Query: 242 KEACQYFVEM 251
+ + EM
Sbjct: 759 DKIVESPAEM 768
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 132/305 (43%), Gaps = 49/305 (16%)
Query: 2 PNVKMYTSLIYGW-CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
PN +Y LI GW C+ A R EM+ +G++ VVTYN++ +C+
Sbjct: 319 PNEVIYNQLI-GWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCK--------- 368
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL------------------HVYSRAHKPQL 102
E + +AE++ DEM + G+ + F+ V+ + +R KP
Sbjct: 369 -EGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPND 427
Query: 103 SLDKLNFMK------------------EKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++ + KG+ +AT +++ LC +++A ++L
Sbjct: 428 AVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKA 487
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
MV +GV TYN + A++L M + P++ T+N + + L
Sbjct: 488 MVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGF-KPDLFTFNTFLRAYCNLG 546
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+++ + + + +K L D+ +Y +I G C+ + +A +Y +E+I+ GL P V +
Sbjct: 547 KVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYN 606
Query: 265 TLYRG 269
L G
Sbjct: 607 ALIGG 611
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 13/235 (5%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR-VRGIE 81
A+ FL E+ RG P++ T N+L+ + L A KVF EMR +
Sbjct: 165 ADAFL-ELSTRGASPSIKTCNILVEALGCGGQLDL----------ARKVFGEMRDGNAVA 213
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
PDV ++++++ RA + + L ++ GI PTV TY ++ LC GR+E+A +L
Sbjct: 214 PDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQL 273
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
G MV + PS T+ R G + Q E PN YN LIG
Sbjct: 274 KGRMVEGRLRPSIVTFGILINGL-ARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHC 332
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
+++ + + + +Y ++ LC++ + + A Q EM+ G+
Sbjct: 333 REGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGM 387
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%)
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G + A + E+ G SPS +T N + + A K++ +M++ + P+++T
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
Y ++I +D + ++ S + + +Y +L+ LC + +EA Q M+
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278
Query: 253 EKGLLPQKVTFETLYRGL 270
E L P VTF L GL
Sbjct: 279 EGRLRPSIVTFGILINGL 296
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVK-GSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+I T NIL+ ++D+ R+++ ++ G+ + D+ +YT++I LC + A
Sbjct: 178 PSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFV 237
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFG 294
E+ G+ P VT+ L L +S + +LK ++ E +TFG
Sbjct: 238 MLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFG 290
>gi|449435037|ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 132/277 (47%), Gaps = 13/277 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + I+GWCK+N+ID A L EM G P V++Y+ ++ C R + N+ +
Sbjct: 239 PNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNF--NKVY 296
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + DEM +G +V +++ ++ +++ + + +L MK G P
Sbjct: 297 E--------LLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLF 348
Query: 122 YTSVVKCLCSCGRIEDAEELLG-EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ L G++ +A + EM V P+ TYN Y R AMKL +M
Sbjct: 349 YNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKAMKLLEEM 408
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRM--DMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
++ + C P++ TY L+ + D+ + + L LD+ +Y++LIHGLC
Sbjct: 409 QKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHHLSLDISTYSLLIHGLCRA 468
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
K A Q F +MI + + P+ +T + L Q +M
Sbjct: 469 NKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFKQKNM 505
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 10/238 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M+E E +VT + + + R A E NA ++FD++ G+E + S ++
Sbjct: 160 MLEEMKEARLVTLDTVAKAMRRFAGAGQWE-------NAVRIFDDLETYGLEKNTESMNV 212
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+L + K + + ++ + I P T+ + C +I++A L EM G
Sbjct: 213 LLDTLCKEKKVEKA-RQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYG 271
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P +Y+ Y R + N +L +M C N+ TY ++ +
Sbjct: 272 HRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQG-CPANVITYTTIMCSLTKSEEFEEA 330
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF-VEMIEKGLLPQKVTFETL 266
+I +K + D Y LIH L K +EA F VEM K +LP T+ ++
Sbjct: 331 LQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSM 388
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 15/175 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMA-ERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P+ Y LI+ + ++ A F EM + V PN TYN ++ CRRA R
Sbjct: 344 PDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRA------R 397
Query: 61 FEKTIRNAEKVFDEM-RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL--NFMKEKGICP 117
EK A K+ +EM + +PDV ++ +L R K L L + + +
Sbjct: 398 EEK----AMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHHLSL 453
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
++TY+ ++ LC + + A +L +M+ + P T E++ +K+ +G
Sbjct: 454 DISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFK-QKNMDG 507
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 11/123 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIE-RGVEPNVVTYNVLLNGVCRRASLHPNE 59
+PN Y S+I +C+ R + A + L EM + +P+V TY LL R
Sbjct: 379 LPNTSTYNSMIAMYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTG------ 432
Query: 60 RFEKTIRNAEKVFDEM-RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
KT + + DEM + D++++S+++H RA+K + M + I P
Sbjct: 433 ---KTDYDLSNLLDEMINKHHLSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPR 489
Query: 119 VAT 121
T
Sbjct: 490 YLT 492
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 136/282 (48%), Gaps = 12/282 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGV-EPNVVTYNVLLNGVCRRASLHPNER 60
PNV +TSLI G CKI + A R ++I+ +PNV TY V++ G C+
Sbjct: 288 PNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCK--------- 338
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + AE + M +G+ P+ +++ ++ + + + + +N M+ +G P +
Sbjct: 339 -EGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIY 397
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC G+I++A ++L G+ TY E+ + A+ L+ +M
Sbjct: 398 TYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRM 457
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E+ C P+IHTY LI + +M+ +++++ EL +YT +I G C+ K
Sbjct: 458 AENG-CHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGK 516
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
A + F M++ G +T+ L GL + L R L
Sbjct: 517 STSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARAL 558
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 127/265 (47%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT +I G+CK ++ AE LG M+E+G+ PN TY L++G C+ S N F
Sbjct: 324 PNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSF--NCAF 381
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + ++MR G +P++ +++ ++ + K Q + L +G+ T
Sbjct: 382 E--------LMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVT 433
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ C G I A +L M NG P TY Y ++ + KL+ +
Sbjct: 434 YTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCL 493
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+L VP TY +I + + + ++ + + D +Y LI GLC++ +
Sbjct: 494 AIEL-VPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRL 552
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+EA + M++K L+P +VT TL
Sbjct: 553 EEARALYEGMLDKRLVPCEVTPVTL 577
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 12/279 (4%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRN 67
T ++ +C+ R M+E G PNVV Y ++G+C+RA ++
Sbjct: 224 TVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRA----------YVKQ 273
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK-LNFMKEKGICPTVATYTSVV 126
A V +EM +G++P+V + + +++ + + + L +K P V TYT ++
Sbjct: 274 AFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMI 333
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G++ AE LLG MV G++P+ TY + N A +L +M+ +
Sbjct: 334 GGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGF- 392
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PNI+TYN LI ++ ++ L LD +YT++I C++ A
Sbjct: 393 QPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALD 452
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK 285
F M E G P T+ TL Q + ++L K
Sbjct: 453 LFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDK 491
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 110/262 (41%), Gaps = 13/262 (4%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
++ + + R+ A + EM G+ V T N +L RA L + A
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVL-----RAGLDTG-----SFAYAR 169
Query: 70 KVFDEMRVRG-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
KVFD M RG + PD SF ++ R + + L M+ +G C AT T +V+
Sbjct: 170 KVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRV 229
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
C GR D EL M+ G P+ Y + R A + +M L P
Sbjct: 230 FCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGL-KP 288
Query: 189 NIHTYNILIGMFMALNRMD-MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
N++T+ LI + + R +K S ++ +YT++I G C++ K A
Sbjct: 289 NVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEML 348
Query: 248 FVEMIEKGLLPQKVTFETLYRG 269
M+E+GL P T+ TL G
Sbjct: 349 LGRMVEQGLAPNTNTYTTLISG 370
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 113/270 (41%), Gaps = 29/270 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PN+ Y +LI G CK +I A + L +G++ + VTY V++ C++ +
Sbjct: 394 PNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDL 453
Query: 56 ---------HPN--------ERF--EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
HP+ R+ ++ + ++K+FD+ + P +++ ++ Y +
Sbjct: 454 FNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCK 513
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K +L M + G TY +++ LC R+E+A L M+ + P T
Sbjct: 514 VGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVT 573
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
EY R+ A A+ + ++ + HT N+L+ A+ ++
Sbjct: 574 PVTLAFEYCRREKAVVAVSILDRLDKRR----KNHTVNVLVRKLSAIGHVEDASLFLKKA 629
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+L +D +YT I+ +K+ A +
Sbjct: 630 LDVDLAVDRLAYTSFINSCYANKKYALATE 659
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + YTS+I G+CK+ + A R M++ G + + +TY L++G+C+
Sbjct: 498 VPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCK--------- 548
Query: 61 FEKTIRNAEKVFDEMRVRGIEP-DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
E + A +++ M + + P +VT ++ Y R K +++ L+ + ++ TV
Sbjct: 549 -ESRLEEARALYEGMLDKRLVPCEVTPVTLAFE-YCRREKAVVAVSILDRLDKRRKNHTV 606
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
+V+ L + G +EDA L + + ++ Y F
Sbjct: 607 ---NVLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFI 645
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 6/204 (2%)
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV-RN 148
++ ++ A + + D + M+ G+ V T V++ G A ++ MV R
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179
Query: 149 GVSPSAETYNCFFKE--YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G+ P A ++ GR + A L M+ C+ N T +++ +F R
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDA--LLTVMQGQGFCLDNA-TCTVIVRVFCQKGRF 236
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
V E++ + ++ +YT I GLC++ K+A EM+ KGL P T +L
Sbjct: 237 RDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSL 296
Query: 267 YRGLIQSDMLRTWRRLKKKLDEES 290
GL + RL KL + S
Sbjct: 297 INGLCKIGWTERAFRLFLKLIKSS 320
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 131/265 (49%), Gaps = 21/265 (7%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
+ +Y + W KI + + M GV P++ TYN L++ CRR SL+
Sbjct: 262 LNVYGKMGMPWSKIAGL------VDSMKSSGVAPDLYTYNTLISS-CRRGSLY------- 307
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
A +VF+EM+ G PD +++ +L VY ++ +P+ +++ L M+ G P++ TY
Sbjct: 308 --EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYN 365
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
S++ G +++A EL +MV+ G+ P TY + + AMK++ +M+
Sbjct: 366 SLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVA 425
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVR--EIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PNI T+N LI M NR + V +++ +K E D+ ++ L+ +
Sbjct: 426 G-CQPNICTFNALIKMHG--NRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMD 482
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
E F EM G +P++ TF TL
Sbjct: 483 SEVSGVFKEMKRAGFVPERDTFNTL 507
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 135/297 (45%), Gaps = 23/297 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SLI + + +D A +M+++G++P+V TY LL+G F
Sbjct: 359 PSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSG------------F 406
Query: 62 EKTIRN--AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC--- 116
EKT ++ A KVF+EMRV G +P++ +F+ ++ ++ ++ + +E IC
Sbjct: 407 EKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGN---FVEMMKVFEEIKICECV 463
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P + T+ +++ G + + EM R G P +T+N Y + AM +
Sbjct: 464 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAI 523
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
YR+M D P++ TYN ++ + ++ +K + +Y L+H
Sbjct: 524 YRRML-DAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYA 582
Query: 237 EKQKWKEACQYFVEMIEKGLL-PQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
K E E I G++ PQ V +TL +SD+L R +L E+ +
Sbjct: 583 -NGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFS 638
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 116/240 (48%), Gaps = 13/240 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + +L+ + K + + ER E+ E+G P++ T N +++ RR
Sbjct: 604 PQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRR--------- 654
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + ++ + ++ G P +T+++ ++++YSR + S D L + KG+ P + +
Sbjct: 655 -RMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIIS 713
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V+ C GR+++A + EM G++P TYN F Y A+ + + M
Sbjct: 714 FNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMI 773
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+++ C PN +TYN LI F LNR D ++++ + + D L+ L +KW
Sbjct: 774 KNE-CKPNQNTYNSLIDWFCKLNRRDEANSFISNLRNLDPSVTKDEERRLLERL--NKKW 830
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 115/280 (41%), Gaps = 19/280 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + +LI + + D A M++ GV P++ TYN +L + R
Sbjct: 498 VPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGG------- 550
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK---GIC- 116
+EKV EM+ +P+ ++ +LH Y+ + +++++ + E+ GI
Sbjct: 551 ---LWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKE----VERMSALAEEIYSGIIE 603
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P ++V + + E E+ G SP T N Y R+ + ++
Sbjct: 604 PQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEI 663
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+K+ P++ TYN L+ M+ + +I + + D+ S+ +I C
Sbjct: 664 LNFIKDSGF-TPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYC 722
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ KEA + F EM + GL P +T+ T M
Sbjct: 723 RNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMF 762
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A + ++R G+ D+ +++ ++ Y+ + + ++ ++E+G PT+ TY ++
Sbjct: 204 AASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILN 263
Query: 128 CLCSCGRI-EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
G L+ M +GV+P TYN R A +++ +MK
Sbjct: 264 VYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFS 323
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+ TYN L+ ++ R E+ ++ S + +Y LI EA +
Sbjct: 324 -PDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAME 382
Query: 247 YFVEMIEKGLLPQKVTFETLYRGL 270
+M++KG+ P T+ TL G
Sbjct: 383 LKSQMVKKGIKPDVFTYTTLLSGF 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 90/206 (43%), Gaps = 4/206 (1%)
Query: 88 SIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147
++++ V + + + L+ ++ G+ + YTS++ S GR +A + ++
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248
Query: 148 NGVSPSAETYNCFFKEYRGRKDA--NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
G P+ TYN Y G+ + L MK + P+++TYN LI +
Sbjct: 249 EGCRPTLITYNVILNVY-GKMGMPWSKIAGLVDSMKSSGVA-PDLYTYNTLISSCRRGSL 306
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ E++ +K + D +Y L+ + ++ +EA + EM G P VT+ +
Sbjct: 307 YEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNS 366
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESI 291
L + +L LK ++ ++ I
Sbjct: 367 LISAYARDGLLDEAMELKSQMVKKGI 392
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 138/272 (50%), Gaps = 15/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + Y LI G+CKI +++ AE L +M +GV N + +N +++G CR+
Sbjct: 315 PNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKG-------- 366
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A K+ M G+E D+ +++ + R ++ + L+ M E G+ P T
Sbjct: 367 --MVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVT 424
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G + +A L EM G +PS TYN Y + A + ++M+
Sbjct: 425 YTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEME 484
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ VP+++TY L+ ++D+ +++ +K ++ +YT LI GL ++ +
Sbjct: 485 KKGF-VPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRS 543
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ A Q + +M++ GL+P ++LY L+ S
Sbjct: 544 EAAFQLYDDMLKAGLIPD----DSLYSALVGS 571
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 141/308 (45%), Gaps = 30/308 (9%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS---------LHPNER 60
++ G CK R+D A R L +M GV N + YN LL+ R+ + NE
Sbjct: 183 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 242
Query: 61 FEKT----------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL 104
E T I E +F+EM+ + DV ++ V++ Y RA + +
Sbjct: 243 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 302
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
L+ G+ P TY ++ C G++E AE LL +M GV + +N Y
Sbjct: 303 KVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 362
Query: 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL- 223
+ + A+K+ M++ + + +I+TYN L +NR+D + + H+ E+G+
Sbjct: 363 CRKGMVDDALKIKAAMEKMGVEL-DIYTYNTLACGLCRVNRLDEAKTLL-HIM-IEMGVV 419
Query: 224 -DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ +YT LI C+ EA + F EM EKG P VT+ + G + +R R
Sbjct: 420 PNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERF 479
Query: 283 KKKLDEES 290
+K+++++
Sbjct: 480 RKEMEKKG 487
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YT+LI CK + A R EM E+G P+VVTYNV+++G ++ S+ ER
Sbjct: 419 VPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAER 478
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F K EM +G PDV +++ ++H + K ++L MK++G P V
Sbjct: 479 FRK----------EMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVV 528
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR--GRKD 169
YT+++ L GR E A +L +M++ G+ P Y+ RKD
Sbjct: 529 AYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 579
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 114 GICPTVAT---YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
G CP + + VV LC GR++DA LL +M R+GVS +A YN Y +KD
Sbjct: 169 GSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKD- 227
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD------ 224
+G ++ ++ E++ + TY IL+ + V ++N +K + + D
Sbjct: 228 DGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTA 287
Query: 225 -----------------LD------------SYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
LD +Y +LI+G C+ + + A +M +G
Sbjct: 288 VINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQG 347
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
+ ++ F T+ G + M+ ++K +++ G E Y +
Sbjct: 348 VGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEK----MGVELDIYTY 390
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 123/269 (45%), Gaps = 10/269 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + LI G C+I ID A F M G P++V+YN L+NG CR +
Sbjct: 211 VPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHD 270
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K ++M ++G+ PDV +++ ++ Y + + + + + M GI P
Sbjct: 271 LLK---------EDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDF 321
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++ G + A + +M+ G P T+ Y + N +KL+ +M
Sbjct: 322 TFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEM 381
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K +L PN++TY +LI NR+ R H+K SE+ Y +I G C+ K
Sbjct: 382 KVRNLS-PNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA EM EK P K+TF L G
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIG 469
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 20/289 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGE-MIERGVEPNVVTYNVLLNGVCRRASLHPNE 59
P++ Y +LI G+C++N I L E M+ +GV P+V+TY +++G C+ +
Sbjct: 246 FPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDM---- 301
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ A ++FDEM GI+P+ +F++++ + + + ++ M G P V
Sbjct: 302 ------KAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDV 355
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKDANGAMK 175
T+TS++ C G + +L EM +SP+ TY N KE R R+ N
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARN---- 411
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
R +K ++ VP YN +I F ++D I ++ + D ++T+LI G
Sbjct: 412 FLRHLKSSEV-VPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
C K + EA F +MIE +P ++T +L L+++ M ++K+
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQ 519
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 124/269 (46%), Gaps = 23/269 (8%)
Query: 41 TYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP 100
TY++L+ +C+ + N+ +A+ VFD MR GI PD + +++ Y+R K
Sbjct: 111 TYDLLMRNLCK---VGLND-------SAKIVFDCMRSDGILPDSSILELLVSSYARMGKL 160
Query: 101 QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
+ + LN + GI + Y +++ L +++A L E + P ++N
Sbjct: 161 DSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNIL 220
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM----DMVREIWNHV 216
+ + + A + ++ M C P+I +YN LI F +N + D+++E +
Sbjct: 221 IRGLCRIGEIDKAFEFFQNMGNFG-CFPDIVSYNTLINGFCRVNEISKGHDLLKEDM-LI 278
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
KG + D+ +YT +I G C+ K A + F EM+ G+ P TF L G + +
Sbjct: 279 KG--VSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNM 336
Query: 277 RTWRRLKKKL-----DEESITFGSEFQNY 300
R+ + +K+ + +TF S Y
Sbjct: 337 RSAMVMYEKMLLLGCLPDVVTFTSLIDGY 365
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 10/221 (4%)
Query: 88 SIVLHVYSRAHKPQLSLDKLNFMKEK-GICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
SI V R P L L F + I T TY +++ LC G + A+ + M
Sbjct: 77 SIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMR 136
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+G+ P + Y + A ++ + V + YN L+ M + N +
Sbjct: 137 SDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKV-SPFVYNNLLNMLVKQNLV 195
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D ++ D+ S+ +LI GLC + +A ++F M G P V++ TL
Sbjct: 196 DEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTL 255
Query: 267 YRGLIQ-------SDMLRTWRRLKKKLDEESITFGSEFQNY 300
G + D+L+ L K + + IT+ S Y
Sbjct: 256 INGFCRVNEISKGHDLLKE-DMLIKGVSPDVITYTSIISGY 295
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 123/269 (45%), Gaps = 10/269 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + LI G C+I ID A F M G P++V+YN L+NG CR +
Sbjct: 211 VPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHD 270
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K ++M ++G+ PDV +++ ++ Y + + + + + M GI P
Sbjct: 271 LLK---------EDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDF 321
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++ G + A + +M+ G P T+ Y + N +KL+ +M
Sbjct: 322 TFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEM 381
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K +L PN++TY +LI NR+ R H+K SE+ Y +I G C+ K
Sbjct: 382 KVRNLS-PNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA EM EK P K+TF L G
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIG 469
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 20/289 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGE-MIERGVEPNVVTYNVLLNGVCRRASLHPNE 59
P++ Y +LI G+C++N I L E M+ +GV P+V+TY +++G C+ +
Sbjct: 246 FPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDM---- 301
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ A ++FDEM GI+P+ +F++++ + + + ++ M G P V
Sbjct: 302 ------KAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDV 355
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKDANGAMK 175
T+TS++ C G + +L EM +SP+ TY N KE R R+ N
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARN---- 411
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
R +K ++ VP YN +I F ++D I ++ + D ++T+LI G
Sbjct: 412 FLRHLKSSEV-VPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
C K + EA F +MIE +P ++T +L L+++ M ++K+
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQ 519
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 124/269 (46%), Gaps = 23/269 (8%)
Query: 41 TYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP 100
TY++L+ +C+ + N+ +A+ VFD MR GI PD + +++ Y+R K
Sbjct: 111 TYDLLMRNLCK---VGLND-------SAKIVFDCMRSDGILPDSSILELLVSSYARMGKL 160
Query: 101 QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
+ + LN + GI + Y +++ L +++A L E + P ++N
Sbjct: 161 DSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNIL 220
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM----DMVREIWNHV 216
+ + + A + ++ M C P+I +YN LI F +N + D+++E +
Sbjct: 221 IRGLCRIGEIDKAFEFFQNMGNFG-CFPDIVSYNTLINGFCRVNEISKGHDLLKEDM-LI 278
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
KG + D+ +YT +I G C+ K A + F EM+ G+ P TF L G + +
Sbjct: 279 KG--VSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNM 336
Query: 277 RTWRRLKKKL-----DEESITFGSEFQNY 300
R+ + +K+ + +TF S Y
Sbjct: 337 RSAMVMYEKMLLLGCLPDVVTFTSLIDGY 365
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 10/221 (4%)
Query: 88 SIVLHVYSRAHKPQLSLDKLNFMKEK-GICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
SI V R P L L F + I T TY +++ LC G + A+ + M
Sbjct: 77 SIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMR 136
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+G+ P + Y + A ++ + V + YN L+ M + N +
Sbjct: 137 SDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKV-SPFVYNNLLNMLVKQNLV 195
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D ++ D+ S+ +LI GLC + +A ++F M G P V++ TL
Sbjct: 196 DEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTL 255
Query: 267 YRGLIQ-------SDMLRTWRRLKKKLDEESITFGSEFQNY 300
G + D+L+ L K + + IT+ S Y
Sbjct: 256 INGFCRVNEISKGHDLLKE-DMLIKGVSPDVITYTSIISGY 295
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 144/298 (48%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G+ K +D A EM++RG+ PNVVTYN ++ +C+
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCK---------- 246
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A +V M G+ P+ +++ ++H Y + +P+ ++ L M G+ P V T
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR +A ++ M + G+ P TY + Y + L M
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN + ++ILI + ++D +++ ++ L D +Y +I LC+ +
Sbjct: 367 RNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
++A +YF +MI++ L P + + +L L D + L ++ + I + F N
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 150/348 (43%), Gaps = 91/348 (26%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN + Y S+++G+C + A FL +M GVEP+VVTYN L++ +C+ N R
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK------NGR 319
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTS---------------------------------- 86
+ A K+FD M RG++P++T+
Sbjct: 320 CTE----ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375
Query: 87 -FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
FSI++ Y++ K ++ + M+++G+ P TY +V+ LC GR+EDA +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 146 VRNGVSPSAETYN------CFFKEYRGRKDANGAMKLYRQMKEDDLCV------------ 187
+ +SP YN C F ++ + A +L +M + +C+
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKW------DKAKELILEMLDRGICLDTIFFNSIIDSH 489
Query: 188 ----------------------PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL 225
PNI TY+ LI + +MD ++ + + D
Sbjct: 490 CKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDC 549
Query: 226 DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+Y LI+G C+ + ++A F EM G+ P +T+ + +GL Q+
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 129/266 (48%), Gaps = 11/266 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y S+I CK +D A L M++ GV PN TYN +++G C +S P E
Sbjct: 231 LPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC--SSGQPKE- 287
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +M G+EPDV +++ ++ + + + + M ++G+ P +
Sbjct: 288 -------AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++++ + G + + LL MVRNG+ P+ ++ Y + + AM ++ +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L P+ TY +IG+ R++ + + L Y LIH LC K
Sbjct: 401 RQQGL-NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
W +A + +EM+++G+ + F ++
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSI 485
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 139/298 (46%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +Y SLI+ C ++ D A+ + EM++RG+ + + +N +++ C+
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK---------- 491
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +EK+FD M G++P++ ++S ++ Y A K + L M G+ P T
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R+EDA L EM +GVSP TYN + + A +LY +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + + TYNI++ N D ++ ++ ++L L+ ++ ++I L + +
Sbjct: 612 ESGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
EA F + GL+P T+ + LI+ +L L ++E T S N
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 19/297 (6%)
Query: 7 YTSLIYGWCKINRI-DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+T L+ G C R D + L M + G PNV +YN+LL G+C E
Sbjct: 129 FTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCD----------ENRS 178
Query: 66 RNAEKVFDEMRVRGIE--PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+ A ++ M G + PDV S++ V++ + + + + M ++GI P V TY
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYN 238
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
S++ LC ++ A E+L MV+NGV P+ TYN Y A+ ++M D
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
+ P++ TYN L+ R R++++ + L ++ +Y L+ G K E
Sbjct: 299 GV-EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357
Query: 244 ACQYFVEMIEKGLLPQKVTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFGS 295
M+ G+ P F L +G + ML + ++ L+ +++T+G+
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 6/215 (2%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
+A VFDE+ RG + + L +R H P ++ + N M G + P + TY
Sbjct: 37 DARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C GR++ LG +++ G A + K K + AM + +
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCEKQKW 241
C+PN+ +YNIL+ NR E+ + G + D+ SYT +I+G ++
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+A + EM+++G+LP VT+ ++ L ++ +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAM 250
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 122/281 (43%), Gaps = 27/281 (9%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V PN+ TY +L+ C L + + N K +G D +F+ +L
Sbjct: 87 VTPNLCTYGILIGSCCCAGRL---DLGFAALGNVIK-------KGFRVDAIAFTPLLKGL 136
Query: 95 SRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG--VS 151
+ ++D L M + G P V +Y ++K LC R ++A ELL M +G
Sbjct: 137 CADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP 196
Query: 152 PSAETY----NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
P +Y N FFKE D + A Y +M + + +PN+ TYN +I MD
Sbjct: 197 PDVVSYTTVINGFFKE----GDLDKAYGTYHEMLDRGI-LPNVVTYNSIIAALCKAQAMD 251
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
E+ + + + + +Y ++HG C + KEA + +M G+ P VT+ +L
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311
Query: 268 RGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNYHFK 303
L ++ R++ K+ L E T+G+ Q Y K
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--DDLCVPNIHTY 193
EDA + E++R G S NC + R A+ Y +M D PN+ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADV-ARHSPAAAVSRYNRMARAGADEVTPNLCTY 94
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV-EMI 252
ILIG R+D+ +V +D ++T L+ GLC ++ +A + M
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154
Query: 253 EKGLLPQKVTFETLYRGL 270
+ G +P ++ L +GL
Sbjct: 155 QLGCIPNVFSYNILLKGL 172
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 131/265 (49%), Gaps = 21/265 (7%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
+ +Y + W KI + + M GV P++ TYN L++ CRR SL+
Sbjct: 262 LNVYGKMGMPWSKIAGL------VDSMKSSGVAPDLYTYNTLISS-CRRGSLY------- 307
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
A +VF+EM+ G PD +++ +L VY ++ +P+ +++ L M+ G P++ TY
Sbjct: 308 --EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYN 365
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
S++ G +++A EL +MV+ G+ P TY + + AMK++ +M+
Sbjct: 366 SLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVA 425
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVR--EIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PNI T+N LI M NR + V +++ +K E D+ ++ L+ +
Sbjct: 426 G-CQPNICTFNALIKMHG--NRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMD 482
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
E F EM G +P++ TF TL
Sbjct: 483 SEVSGVFKEMKRAGFVPERDTFNTL 507
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 135/297 (45%), Gaps = 23/297 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SLI + + +D A +M+++G++P+V TY LL+G F
Sbjct: 359 PSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSG------------F 406
Query: 62 EKTIRN--AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC--- 116
EKT ++ A KVF+EMRV G +P++ +F+ ++ ++ ++ + +E IC
Sbjct: 407 EKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGN---FVEMMKVFEEIKICECV 463
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P + T+ +++ G + + EM R G P +T+N Y + AM +
Sbjct: 464 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAI 523
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
YR+M D P++ TYN ++ + ++ +K + +Y L+H
Sbjct: 524 YRRML-DAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYA 582
Query: 237 EKQKWKEACQYFVEMIEKGLL-PQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
K E E I G++ PQ V +TL +SD+L R +L E+ +
Sbjct: 583 -NGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFS 638
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 115/240 (47%), Gaps = 13/240 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + +L+ + K + + ER E+ E+G P++ T N +++ RR
Sbjct: 604 PQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRR--------- 654
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + ++ + ++ G P +T+++ ++++YSR + S D L + KG+ P + +
Sbjct: 655 -RMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIIS 713
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V+ C GR+++A + EM G++P TYN F Y A+ + + M
Sbjct: 714 FNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMI 773
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ C PN +TYN LI F LNR D ++++ + + D L+ L +KW
Sbjct: 774 KNG-CKPNQNTYNSLIDWFCKLNRRDEASSFISNLRNLDPSVTKDEERRLLERL--NKKW 830
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 127/276 (46%), Gaps = 36/276 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLL----NG--VCRRASL 55
P++ Y +++ + + +E+ L EM + +PN +TY LL NG V R ++L
Sbjct: 534 PDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSAL 593
Query: 56 ---------HPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P KT+ E+ F E+R +G PD+T+ + ++ +Y R
Sbjct: 594 AEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGR 653
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + LNF+K+ G P++ TY S++ E +E++L E++ G+ P +
Sbjct: 654 RRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIIS 713
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF----MALNRMDMVRE- 211
+N Y A +++ +MK+ L P++ TYN I + M + +D+V+
Sbjct: 714 FNTVIFAYCRNGRMKEASRIFAEMKDFGLA-PDVITYNTFIASYASDSMFIEAIDVVKYM 772
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
I N K ++ ++Y LI C+ + EA +
Sbjct: 773 IKNGCKPNQ-----NTYNSLIDWFCKLNRRDEASSF 803
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 115/280 (41%), Gaps = 19/280 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + +LI + + D A M++ GV P++ TYN +L + R
Sbjct: 498 VPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGG------- 550
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK---GIC- 116
+EKV EM+ +P+ ++ +LH Y+ + +++++ + E+ GI
Sbjct: 551 ---LWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKE----VERMSALAEEIYSGIIE 603
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P ++V + + E E+ G SP T N Y R+ + ++
Sbjct: 604 PQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEI 663
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+K+ P++ TYN L+ M+ + +I + + D+ S+ +I C
Sbjct: 664 LNFIKDSGF-TPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYC 722
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ KEA + F EM + GL P +T+ T M
Sbjct: 723 RNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMF 762
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A + ++R G+ D+ +++ ++ Y+ + + ++ ++E+G PT+ TY ++
Sbjct: 204 AASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILN 263
Query: 128 CLCSCGRI-EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
G L+ M +GV+P TYN R A +++ +MK
Sbjct: 264 VYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFS 323
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+ TYN L+ ++ R E+ ++ S + +Y LI EA +
Sbjct: 324 -PDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAME 382
Query: 247 YFVEMIEKGLLPQKVTFETLYRGL 270
+M++KG+ P T+ TL G
Sbjct: 383 LKSQMVKKGIKPDVFTYTTLLSGF 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 90/206 (43%), Gaps = 4/206 (1%)
Query: 88 SIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147
++++ V + + + L+ ++ G+ + YTS++ S GR +A + ++
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248
Query: 148 NGVSPSAETYNCFFKEYRGRKDA--NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
G P+ TYN Y G+ + L MK + P+++TYN LI +
Sbjct: 249 EGCRPTLITYNVILNVY-GKMGMPWSKIAGLVDSMKSSGVA-PDLYTYNTLISSCRRGSL 306
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ E++ +K + D +Y L+ + ++ +EA + EM G P VT+ +
Sbjct: 307 YEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNS 366
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESI 291
L + +L LK ++ ++ I
Sbjct: 367 LISAYARDGLLDEAMELKSQMVKKGI 392
>gi|297843042|ref|XP_002889402.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
gi|297335244|gb|EFH65661.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
Length = 490
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 139/265 (52%), Gaps = 14/265 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ + L+ GW + AE F EM +G++P+VVTYN L++ C+
Sbjct: 211 PDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCK---------- 257
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ I A K+ D+MR PDV +++ ++ +P + + L MKE G P VA
Sbjct: 258 DREIEKAYKLIDKMREEDETPDVITYTTIIGGLGLIGQPDKAREVLKEMKEYGCYPDVAA 317
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + ++ C R+ DA++L+ EMV+ G+SP+A TYN FF+ D + +LY +M
Sbjct: 318 YNAAIRNYCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYERML 377
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C+PN + LI MF ++DM +W + G +L+ LC+ K
Sbjct: 378 GNG-CLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKV 436
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+EA + +EM+EKG P V+F+ +
Sbjct: 437 EEAEKCLLEMVEKGHRPSNVSFKRI 461
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
M G+ P TYN Y ++ A KL +M+E+D P++ TY +IG +
Sbjct: 236 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEDE-TPDVITYTTIIGGLGLIG 294
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+ D RE+ +K D+ +Y I C ++ +A + EM++KGL P T+
Sbjct: 295 QPDKAREVLKEMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDEMVKKGLSPNATTYN 354
Query: 265 TLYRGL-IQSDMLRTW 279
+R L + +D+ R+W
Sbjct: 355 LFFRVLSLANDLGRSW 370
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 138/272 (50%), Gaps = 15/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + Y LI G+CKI +++ AE L +M +GV N + +N +++G CR+
Sbjct: 106 PNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKG-------- 157
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A K+ M G+E D+ +++ + R ++ + L+ M E G+ P T
Sbjct: 158 --MVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVT 215
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G + +A L EM G +PS TYN Y + A + ++M+
Sbjct: 216 YTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEME 275
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ VP+++TY L+ ++D+ +++ +K ++ +YT LI GL ++ +
Sbjct: 276 KKGF-VPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRS 334
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ A Q + +M++ GL+P ++LY L+ S
Sbjct: 335 EAAFQLYDDMLKAGLIPD----DSLYSALVGS 362
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YT+LI CK + A R EM E+G P+VVTYNV+++G ++ S+ ER
Sbjct: 210 VPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAER 269
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F K EM +G PDV +++ ++H + K ++L MK++G P V
Sbjct: 270 FRK----------EMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVV 319
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
YT+++ L GR E A +L +M++ G+ P Y+
Sbjct: 320 AYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 360
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 26/285 (9%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRN 67
+ ++ G CK R+D A R L +M GV N + YN LL+ R +K
Sbjct: 18 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVR----------QKDDGR 67
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
+++ + M GIE V + P LD+ G+ P TY ++
Sbjct: 68 VQEILEIMENEGIEATVGDGT--------CGGPPKVLDEC---VGNGVEPNERTYGVLIN 116
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
C G++E AE LL +M GV + +N Y + + A+K+ M++ + +
Sbjct: 117 GFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVEL 176
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKEAC 245
+I+TYN L +NR+D + + H+ E+G+ + +YT LI C+ EA
Sbjct: 177 -DIYTYNTLACGLCRVNRLDEAKTLL-HIM-IEMGVVPNYVTYTTLISIHCKDGDMVEAR 233
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ F EM EKG P VT+ + G + +R R +K+++++
Sbjct: 234 RLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKG 278
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 114 GICPTVAT---YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
G CP + + VV LC GR++DA LL +M R+GVS +A YN Y +KD
Sbjct: 6 GSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDD 65
Query: 171 NGAMKLYRQMKED------------------DLCV-----PNIHTYNILIGMFMALNRMD 207
++ M+ + D CV PN TY +LI F + +M+
Sbjct: 66 GRVQEILEIMENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQME 125
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ ++G +GL+ + +I G C K +A + M + G+ T+ TL
Sbjct: 126 AAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLA 185
Query: 268 RGLIQSDMLRTWRRL 282
GL + + L + L
Sbjct: 186 CGLCRVNRLDEAKTL 200
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 131/267 (49%), Gaps = 27/267 (10%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF---EKT 64
T+++ G CK +R+D A +F+ EM + GV PN VTY+ L++G + L RF EK
Sbjct: 197 TTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKA 256
Query: 65 -----------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
+ A K +E+R G+ PDV ++S++++ ++RA +
Sbjct: 257 RKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFD 316
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
SL+ L M+ G+ P V TY++++ LC + +DA LL M G P+ TYN
Sbjct: 317 ASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVM 376
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
+ ++Y M + C P++ TY+I++ +D +++ +K S
Sbjct: 377 DGLCKSGKMDEVHRVYEMMLKSR-CSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE 435
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYF 248
G D +Y+M+I LC K +EAC +
Sbjct: 436 GPDAAAYSMVITSLCRAGKLEEACGMY 462
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 154/332 (46%), Gaps = 50/332 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + +Y +I G C+ +R+ A + L +M+E + PNV TY +LLNG+CR
Sbjct: 86 PTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCR---------- 135
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +VF EM+ G +P+ ++ ++ SRA + +L + + + V T
Sbjct: 136 SNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVIT 195
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T++V LC R++DA + + EM + GV P+ TY+ +R + + ++ + + K
Sbjct: 196 CTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEK 255
Query: 182 E---------------DDLC--------------------VPNIHTYNILIGMFMALNRM 206
D LC VP++ TY++LI F +
Sbjct: 256 ARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQF 315
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D E+ ++ + + D+ +Y+ LI+ LC+++K+++A + M G P VT+ ++
Sbjct: 316 DASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSV 375
Query: 267 YRGLIQSDMLRTWRR-----LKKKLDEESITF 293
GL +S + R LK + + +T+
Sbjct: 376 MDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTY 407
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 105/263 (39%), Gaps = 42/263 (15%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G++ D +F+++ R K + + +G+ TY VV LC G A
Sbjct: 14 GVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQA 73
Query: 139 EELLGEMVRNGV-SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
EL+ E+ +GV +P+ YN A K+ +M E+ + VPN+ TY IL+
Sbjct: 74 LELVREL--SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESI-VPNVFTYTILL 130
Query: 198 GMFMALNRMDMVREIWNHVKGS-----------------------------------ELG 222
N+ + RE++ +K + EL
Sbjct: 131 NGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELP 190
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
D+ + T ++ GLC+ + +A ++ EM + G+ P +VT+ L G Q L R+
Sbjct: 191 TDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGEL---DRV 247
Query: 283 KKKLDEESITFGSEFQNYHFKPY 305
+ +EE G + + Y
Sbjct: 248 IRFFEEEKARKGGSLEAAAYPGY 270
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y S++ G CK ++D R M++ P+VVTY++++NG+ + L
Sbjct: 367 PNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLD----- 421
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK----EKGICP 117
+A K+F+ ++ PD ++S+V+ RA K + + + M+ IC
Sbjct: 422 -----SAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICR 476
Query: 118 TVATYTSVVKCLCSCGRIEDAEELL 142
+A +V LC R + A ++
Sbjct: 477 ALA---GLVAALCDAERTDSARRIV 498
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 143/294 (48%), Gaps = 24/294 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +L GWC++ A L M+E G+ P TYN++L G R L
Sbjct: 197 PDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQL------ 250
Query: 62 EKTIRNAEKVFDEMRVRG-----IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
R+A F +M+ RG +PDV S++ ++H A + + + + M ++G
Sbjct: 251 ----RHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCA 306
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P+VATY ++++ +C G +EDA + M+ G P+ TY + + +KL
Sbjct: 307 PSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKL 366
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV-KGSELGLDLDSYTMLIHGL 235
+MK C P + TYN+LI M+ +++ + KG E + D+Y ++I +
Sbjct: 367 LERMKNGG-CEPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAM 425
Query: 236 CEKQKWKE---ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+++ ++ A + EM+++G LP++ F + GL ML + L +KL
Sbjct: 426 FMRKRAEDMVLAARMVDEMVDRGYLPRRFMFNRVLNGL----MLTGNQELSRKL 475
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 21/237 (8%)
Query: 55 LHPNERFEKTIRNAEKVFDEMRVRGIEPDVT-SFSIVLHVYSRAHK--PQLS--LDKLNF 109
L P R T R +F+ + V PD+ + LH R + P + LD L+
Sbjct: 118 LFPRHRLAFTPRTFPILFERLAVSQRRPDLAVRLFLSLHRSHRVAQDLPLFNSLLDALSK 177
Query: 110 MKEKG------------ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ G P V TY ++ C A ++L MV +G++P+ TY
Sbjct: 178 SRHAGKAASLVRALEQRFTPDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTY 237
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKE----DDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
N K + A + QMK+ D+ C P++ +Y ++ +++ R+++
Sbjct: 238 NIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVF 297
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + + +Y LI +C+K ++A F M+ KG +P VT+ L RGL
Sbjct: 298 DEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNVVTYTVLIRGL 354
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 58/278 (20%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++ ++ SL+ K A + +E+ P+VVTYN L +G CR
Sbjct: 164 DLPLFNSLLDALSKSRHAGKAASLV-RALEQRFTPDVVTYNTLADGWCR----------- 211
Query: 63 KTIRNAEKVFDEMRV---RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI---- 115
+++ + D +R+ GI P T+++I+L + RA + + + D MK++G
Sbjct: 212 --VKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDES 269
Query: 116 C-PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
C P V +YT++V L G++E A ++ EM + G
Sbjct: 270 CKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEG------------------------- 304
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
C P++ TYN LI + ++ +++ + ++ +YT+LI G
Sbjct: 305 -----------CAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNVVTYTVLIRG 353
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
LC K + M G P T+ L R L +
Sbjct: 354 LCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFE 391
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 14/146 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-E 59
+PNV YT LI G C +ID + L M G EP V TYNVL+ + + +
Sbjct: 341 VPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLD 400
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY---SRAHKPQLSLDKLNFMKEKGIC 116
FEK + E + P+ +++I++ RA L+ ++ M ++G
Sbjct: 401 LFEKMSKGEECL----------PNQDTYNIIISAMFMRKRAEDMVLAARMVDEMVDRGYL 450
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELL 142
P + V+ L G E + +LL
Sbjct: 451 PRRFMFNRVLNGLMLTGNQELSRKLL 476
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 13/282 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ YT+LI G C +RI A M + G PN +TY L+ G+CR ++ +
Sbjct: 163 IPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALK 222
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + N ++ +P V S+SI++ + + + D MK +G+ PTV
Sbjct: 223 LHQEMLNDSSLYG----INFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVI 278
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+YTS++ E+A+ L EMV GV P+ T+N A L M
Sbjct: 279 SYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVM 330
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + VPN+ TYN LI F + ++ RE++ + D+ YT+LI+G C+ K
Sbjct: 331 IQRGI-VPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSK 389
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+EA + + M++ G P T+ L GL Q + ++L
Sbjct: 390 VEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 431
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 137/275 (49%), Gaps = 11/275 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + LI CK ++ A+ L MI+RG+ PN++TYN L+ G C L+
Sbjct: 302 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLN----- 356
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++F M +G EPDV ++++++ Y + K + ++ N M + G P V T
Sbjct: 357 -----SARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 411
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ L G++ DA++L G M G+ Y F AM+L+ ++K
Sbjct: 412 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 471
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + +I +N LI +++ E++ + EL D+ +Y ++IH C +
Sbjct: 472 SYNIKL-DIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQV 530
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+A F +M + G P K+T+ TL RG +S L
Sbjct: 531 VKANILFQKMEKNGCTPDKITYATLIRGFFESKKL 565
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 143/313 (45%), Gaps = 24/313 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG------VEPNVVTYNVLLNGVCR-RAS 54
PN Y +L+ G C+ I +A + EM+ +P V++Y+++++ +C+ R
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 55 LHPNERFEK--------TI--------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
+ FE+ T+ A+++F+EM +G++P+V +F++++ V +
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEG 318
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
K + D L M ++GI P + TY S+++ C G + A EL M G P Y
Sbjct: 319 KVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYT 378
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
Y AMKLY M + P++ TY L+ ++ ++++ +K
Sbjct: 379 VLINGYCKTSKVEEAMKLYNGMLQVGK-RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKV 437
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
+ DL Y + ++GLC+ EA + F ++ + F L GL ++ L T
Sbjct: 438 YGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLET 497
Query: 279 WRRLKKKLDEESI 291
L +KL +E +
Sbjct: 498 AWELFEKLPQEEL 510
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 122/262 (46%), Gaps = 31/262 (11%)
Query: 15 CKINRID--MAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
CK I A +F M+ P + ++ LL+G+ + I++ +VF
Sbjct: 70 CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAK-------------IKHYSQVF 116
Query: 73 ---DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
++MR+ GI PD + +I+L+ ++ L + + +G P + TYT+++K L
Sbjct: 117 YLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGL 176
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV-- 187
C RI A L M + G +P+A TY K + + A+KL+++M D
Sbjct: 177 CMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGI 236
Query: 188 ---PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
P + +Y+I+I R D R+++ +K + + SYT L+ W+EA
Sbjct: 237 NFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEA 288
Query: 245 CQYFVEMIEKGLLPQKVTFETL 266
+ F EM+ +G+ P VTF L
Sbjct: 289 KRLFNEMVNQGVQPNVVTFNVL 310
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 111/225 (49%), Gaps = 11/225 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT LI G+CK ++++ A + M++ G P+V TY LL G+ +
Sbjct: 372 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK------- 424
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A+K+F M+V GI D+ + I L+ + +++ N +K I +
Sbjct: 425 ---VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIEC 481
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ LC G++E A EL ++ + + P TYN E+ A L+++M+
Sbjct: 482 FNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKME 541
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
++ C P+ TY LI F +++ V E+ + + ++ LD++
Sbjct: 542 KNG-CTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVN 585
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 85/209 (40%), Gaps = 7/209 (3%)
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE--DAEELLGEMVRNG 149
H S H L++ NF ++ + C G I A + M+ +
Sbjct: 36 HFSSAVHHKSLNVSPQNFNTPISFQQQLSMFLHN----CKTGNITAIQAFQFFHLMMYSN 91
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
+P ++ K + LY QM+ + P+ T NIL+ +NR+
Sbjct: 92 PTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGIS-PDCCTLNILLNCLCNVNRVGEG 150
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + D+ +YT LI GLC + + +A F M + G P +T+ TL +G
Sbjct: 151 LAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKG 210
Query: 270 LIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
L ++ + +L +++ +S +G F+
Sbjct: 211 LCRTGNISIALKLHQEMLNDSSLYGINFK 239
>gi|449494995|ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 488
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 132/277 (47%), Gaps = 13/277 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + I+GWCK+N+ID A L EM G P V++Y+ ++ C R + N+ +
Sbjct: 208 PNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNF--NKVY 265
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + DEM +G +V +++ ++ +++ + + +L MK G P
Sbjct: 266 E--------LLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLF 317
Query: 122 YTSVVKCLCSCGRIEDAEELLG-EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ L G++ +A + EM V P+ TYN Y R AMKL +M
Sbjct: 318 YNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKAMKLLEEM 377
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRM--DMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
++ + C P++ TY L+ + D+ + + L LD+ +Y++LIHGLC
Sbjct: 378 QKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHHLSLDISTYSLLIHGLCRA 437
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
K A Q F +MI + + P+ +T + L Q +M
Sbjct: 438 NKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFKQKNM 474
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 10/238 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M+E E +VT + + + R A E NA ++FD++ G+E + S ++
Sbjct: 129 MLEEMKEARLVTLDTVAKAMRRFAGAGQWE-------NAVRIFDDLETYGLEKNTESMNV 181
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+L + K + + ++ + I P T+ + C +I++A L EM G
Sbjct: 182 LLDTLCKEKKVEKA-RQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYG 240
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P +Y+ Y R + N +L +M C N+ TY ++ +
Sbjct: 241 HRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQG-CPANVITYTTIMCSLTKSEEFEEA 299
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF-VEMIEKGLLPQKVTFETL 266
+I +K + D Y LIH L K +EA F VEM K +LP T+ ++
Sbjct: 300 LQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSM 357
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 15/175 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMA-ERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P+ Y LI+ + ++ A F EM + V PN TYN ++ CRRA R
Sbjct: 313 PDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRA------R 366
Query: 61 FEKTIRNAEKVFDEM-RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL--NFMKEKGICP 117
EK A K+ +EM + +PDV ++ +L R K L L + + +
Sbjct: 367 EEK----AMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHHLSL 422
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
++TY+ ++ LC + + A +L +M+ + P T E++ +K+ +G
Sbjct: 423 DISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFK-QKNMDG 476
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 11/123 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIE-RGVEPNVVTYNVLLNGVCRRASLHPNE 59
+PN Y S+I +C+ R + A + L EM + +P+V TY LL R
Sbjct: 348 LPNTSTYNSMIAMYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTG------ 401
Query: 60 RFEKTIRNAEKVFDEM-RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
KT + + DEM + D++++S+++H RA+K + M + I P
Sbjct: 402 ---KTDYDLSNLLDEMINKHHLSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPR 458
Query: 119 VAT 121
T
Sbjct: 459 YLT 461
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 16/303 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y L++ C ++ A L M+ RG P+VVTYN+LL C+
Sbjct: 149 LPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACK--------- 199
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ R A ++ D MRV G P ++++++ R + + LN + G P
Sbjct: 200 -GRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTV 258
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +V+K L + GR ED EEL+ EM PS T + A++L +M
Sbjct: 259 NYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKM 318
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ D C NI TYN ++ +D + ++++ ++ +Y +L+ GLC ++
Sbjct: 319 SKHD-CTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAER 377
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE-----SITFGS 295
W++A +M + LP +TF T+ L Q + + K++ E+ S+T+ S
Sbjct: 378 WEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSS 437
Query: 296 EFQ 298
+
Sbjct: 438 VIE 440
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 122/297 (41%), Gaps = 47/297 (15%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ Y +++ G C+ +D A L M G +PN+ TYN+L+ G+C ER+E
Sbjct: 326 NIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNA------ERWE 379
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+AE + +M PD+ +F+ ++ + +++ M EKG CP TY
Sbjct: 380 ----DAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTY 435
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+SV++ L G++E + ELL EM G +P + L + E
Sbjct: 436 SSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINYH-----------------LLAECLNE 478
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+D V I MV ++ + + L Y ++ GLC K
Sbjct: 479 EDKLVEAIQ----------------MVHKLQDTGISPQAVL----YNTILLGLCRNGKTD 518
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+A M+ G +P + T+ L +GL ++ R L L + + +N
Sbjct: 519 QAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVDNLIKN 575
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 89/223 (39%), Gaps = 44/223 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y L+ G C R + AE + +M + P+++T+N ++ +C++
Sbjct: 360 PNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKG-------- 411
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG------- 114
A +VF +M +G P+ ++S V+ ++ K + SL+ LN M KG
Sbjct: 412 --LTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINY 469
Query: 115 ---------------------------ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147
I P Y +++ LC G+ + A ++L MV
Sbjct: 470 HLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVS 529
Query: 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
+G P TY+ + A +L + D+ V N+
Sbjct: 530 DGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVDNL 572
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 90/243 (37%), Gaps = 36/243 (14%)
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE----- 136
PDV + ++ R +P D ++ G T TY+++ C GR++
Sbjct: 86 PDVALANRLVRDLCRRGRPA---DAARVVEACGSAATAVTYSALADGYCRVGRLDEARRV 142
Query: 137 ---------------------------DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
DA LL M+ G +P TYN + +
Sbjct: 143 VDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRG 202
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
AM+L M+ + C P TYN+++ +D RE+ N + + +Y
Sbjct: 203 YRQAMELIDLMRVEG-CTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYN 261
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++ GL +W++ + EM + P + T + L Q + + RL +K+ +
Sbjct: 262 TVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKH 321
Query: 290 SIT 292
T
Sbjct: 322 DCT 324
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 136/304 (44%), Gaps = 46/304 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +Y SL+ G C+ I A + + EM+E G P++ TYN+++NG+C+ +
Sbjct: 287 PDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGN------- 339
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I +A V ++ V+G PDV +F+ ++ Y + K +L + M GI P T
Sbjct: 340 ---ISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAIT 396
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y SV+ LC G+ ++ E EM+ G P+A TYN + + A + +M
Sbjct: 397 YNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMS 456
Query: 182 EDDLCVPN-------IH----------------------------TYNILIGMFMALNRM 206
+D L VP+ IH T+NILIG + + M
Sbjct: 457 QDGL-VPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNM 515
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
M +I+ + DL +Y +L+ G C+ A + EM+ KG +P TF +
Sbjct: 516 QMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRV 575
Query: 267 YRGL 270
L
Sbjct: 576 LNSL 579
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 140/305 (45%), Gaps = 11/305 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I G+CK + + A L + I +G P+ VTY L+NG+C
Sbjct: 216 IPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCA--------- 266
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A ++F+E + + ++PD+ ++ ++ R +L +N M E G P +
Sbjct: 267 -EGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIW 325
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY V+ LC G I DA ++ + + G P T+N Y R + A++L +M
Sbjct: 326 TYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERM 385
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P+ TYN ++ + V E + + + +Y +LI C+ +
Sbjct: 386 WMYGI-APDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 444
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
+EA V M + GL+P ++F TL G ++ L L +KLDE+ + ++ N
Sbjct: 445 LEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 504
Query: 301 HFKPY 305
Y
Sbjct: 505 LIGAY 509
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 133/299 (44%), Gaps = 17/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + ++++ C+ I + L ++++RG+ N T N+ + G+C R
Sbjct: 113 PDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGG------RL 166
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + E + D I PDV +++ ++ + K Q + L M +G P T
Sbjct: 167 EEAVALVESM-DAY----IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFT 221
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +++A ELL + + G P TY D A++L+ + +
Sbjct: 222 YNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQ 281
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
DL P++ YN L+ + ++ N + D+ +Y ++I+GLC+
Sbjct: 282 AKDL-KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNI 340
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK-----LDEESITFGS 295
+A + I KG LP TF T+ G + L + +L ++ + ++IT+ S
Sbjct: 341 SDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNS 399
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 12/251 (4%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G P YN +++ + A H A KV+ M G+ PD + ++ +
Sbjct: 5 GCPPAAPAYNAIMDALVNTA-YH---------DQAHKVYVRMLSAGVAPDARTHTVRIKS 54
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ +P ++L L + E+G Y +VV+ L + G DA L EM+R V P
Sbjct: 55 FCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPD 114
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
T+N + D + L ++ + + V N T NI I R++ +
Sbjct: 115 VATFNNVLHALCQKGDIMESGALLAKVLKRGMSV-NKFTCNIWIRGLCEGGRLEEAVALV 173
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + + D+ +Y L+ GLC+ K +EA QY M+ +G +P T+ T+ G +
Sbjct: 174 ESMD-AYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKR 232
Query: 274 DMLRTWRRLKK 284
DML+ L K
Sbjct: 233 DMLQEATELLK 243
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
PN Y LI +CKIN+++ A + M + G+ P+ +++N L++G CR L
Sbjct: 427 PNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLL 486
Query: 61 FEK------------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F+K ++ AEK+F EM +G +PD+ ++ +++ +
Sbjct: 487 FQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCK 546
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
A + L M KG P++AT+ V+ L R+ +A ++ MVR GV P
Sbjct: 547 AANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVP 602
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 78/174 (44%), Gaps = 1/174 (0%)
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGA 173
G P Y +++ L + + A ++ M+ GV+P A T+ K + + A
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64
Query: 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
++L R + E V + ++ G++ + D R +++ + ++ D+ ++ ++H
Sbjct: 65 LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYD-ARHLFDEMLRRDVFPDVATFNNVLH 123
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
LC+K E+ +++++G+ K T RGL + L L + +D
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD 177
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 140/276 (50%), Gaps = 13/276 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVE-PNVVTYNVLLNGVCRRASLHPNER 60
PNV ++ L+ C+ ID A + EM PNV+TY+ L++G+CR L E
Sbjct: 271 PNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRL--KEA 328
Query: 61 FEKTIRNAEKVFDEMRVRG-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
FE +F+EM + I PD +++++++ + R K + + + FMK G CP V
Sbjct: 329 FE--------LFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNV 380
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y+++V LC G+++DA+ +L EM +G+ P A TY + + A++L +
Sbjct: 381 FNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTE 440
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
MKE+D C + T+N+++G R D ++ + + L+ SY ++++ L +
Sbjct: 441 MKEND-CQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNC 499
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ ++A + M+ +G +P T L L + M
Sbjct: 500 ELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGM 535
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 113/243 (46%), Gaps = 17/243 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y LI G+C+ + D A + M G PNV Y+ L++G+C+ L
Sbjct: 342 VPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKL----- 396
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++A+ V EM+ G++PD +++ +++ +SR + +++ L MKE
Sbjct: 397 -----QDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTV 451
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++ LC GR ++A +++ ++ + GV + +Y + A KL M
Sbjct: 452 TFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLM 511
Query: 181 KEDDLCVPNIHTYN-ILIGMFMALNRMDMVREIWNHVKGSELGLDL--DSYTMLIHGLCE 237
VP+ T N +L+ + D +++ V ++G DS+ +LI +C
Sbjct: 512 LSRGF-VPHYATSNELLVRLCKEGMANDAATALFDLV---DMGFQPQHDSWELLIDLICR 567
Query: 238 KQK 240
+K
Sbjct: 568 DRK 570
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 115/292 (39%), Gaps = 47/292 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGV-EPNVVTYNVLLNGVCRRASLHPNER 60
P+ K +S + N++D+ + L V +PNV +N+L+ CRR
Sbjct: 235 PSPKAISSCLNLLVDSNQVDLVRKLLLYAKRSLVYKPNVCIFNILVKYHCRRGD------ 288
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I +A +V EMR K P V
Sbjct: 289 ----IDSAFEVVKEMR----------------------------------NSKYSYPNVI 310
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMV-RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY++++ LC GR+++A EL EMV ++ + P TYN + A+ A +
Sbjct: 311 TYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEF 370
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
MK + C PN+ Y+ L+ ++ + + +K S L D +YT LI+
Sbjct: 371 MKNNG-CCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNG 429
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ EA + EM E VTF + GL + + +KL ++ +
Sbjct: 430 QIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGV 481
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 141/301 (46%), Gaps = 23/301 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
PNV Y L+ C+ NR+ A + L EM +G P+ VTY +++ +C+
Sbjct: 161 PNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEV 220
Query: 53 -ASLHPNERFEKTIRNA-------EKVFD---EMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
A++ P I A ++VF +M RG++P+V +++ ++ + +A + +
Sbjct: 221 LAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELR 280
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
++ L M G P V T+T++V+ L GR+ DA ++ MV G +PS +YN
Sbjct: 281 MACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILI 340
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
+ D GA + M++ C PN+ TY+ LI F + IWN + S
Sbjct: 341 RGLCSVGDLKGASSILNSMEQHG-CFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGC 399
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 281
++ YT ++ C+K + +A +M+ + P VTF TL R L D R R
Sbjct: 400 KPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSL--CDCRRVGRA 457
Query: 282 L 282
L
Sbjct: 458 L 458
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 127/269 (47%), Gaps = 19/269 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+L+ G R+ A M+ G P+ V+YN+L+ G+C L
Sbjct: 296 PNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDL------ 349
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + + M G P+V ++S ++ +S+A ++ N M G P V
Sbjct: 350 ----KGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVV 405
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++V C A+ L+ +M+ P+ T+N + + A+ ++ +M+
Sbjct: 406 YTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMR 465
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMD---MVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
CVPN TYN LI G+F N D MV E+ +H G E L L +Y ++ GLC+
Sbjct: 466 RHG-CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSH--GIE--LSLVTYNTVVSGLCQ 520
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ +EA + +MI +G+ P TF +
Sbjct: 521 TRMSREAMVFVGKMIVQGIQPNAFTFSAI 549
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 121/272 (44%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV+ Y++LI G+ K + A +M G +PNVV Y +++ C++ +
Sbjct: 366 PNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFN----- 420
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ + D+M + P+ +F+ ++ + +L + M+ G P T
Sbjct: 421 -----QAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRT 475
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ L G DA ++ EM +G+ S TYN + + AM +M
Sbjct: 476 YNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMI 535
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN T++ +I + + M + + ++ YT+L+ LC + K
Sbjct: 536 VQGI-QPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKL 594
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+A Y ++M+ +G+ P VT+ L RG+ ++
Sbjct: 595 VDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRN 626
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 114/263 (43%), Gaps = 26/263 (9%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
R EP + YN L++ + R E + V+D MR G+ P+V ++++++
Sbjct: 123 ARPTEPRL--YNHLIDALLR----------ENMVGAVVLVYDNMRKDGVHPNVFTYNLLV 170
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ ++ + L+ M KG P TY ++V LC R+++A E+L M
Sbjct: 171 RALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----P 225
Query: 152 PSAETYNCFF----KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
P A +YN +E+R ++ + M L PN+ TY ++ F +
Sbjct: 226 PVAASYNAIVLALCREFRMQE----VFSVVSDMVGRGL-QPNVITYTTIVDAFCKAGELR 280
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
M I + + ++ ++T L+ GL + + +A + M+ +G P V++ L
Sbjct: 281 MACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILI 340
Query: 268 RGLIQSDMLRTWRRLKKKLDEES 290
RGL L+ + +++
Sbjct: 341 RGLCSVGDLKGASSILNSMEQHG 363
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 10/162 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN + Y LI+G + A + EM G+E ++VTYN +++G+C+
Sbjct: 470 VPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQ--------- 520
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ R A +M V+GI+P+ +FS ++H Y + + +++ L M +
Sbjct: 521 -TRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNIL 579
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
YT ++ LC+ ++ DA L +M+ G+ P+ T+N +
Sbjct: 580 VYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVR 621
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 86/216 (39%), Gaps = 9/216 (4%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC--PTVA-T 121
+ + EMR+RG+ + + ++RA P +L C PT
Sbjct: 71 VDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTEPRL 130
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ L + + M ++GV P+ TYN + A K+ +M
Sbjct: 131 YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA 190
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P+ TY ++ + L+R+D E+ + + SY ++ LC + +
Sbjct: 191 RKG-CPPDDVTYATIVSVLCKLDRLDEATEVL-----AAMPPVAASYNAIVLALCREFRM 244
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+E +M+ +GL P +T+ T+ ++ LR
Sbjct: 245 QEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELR 280
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 6/160 (3%)
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ + V+ L + G ++ + L EM GV + + + A+K + +
Sbjct: 57 AHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRA 116
Query: 181 KEDDLCV----PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
D C P + YN LI + N + V ++++++ + ++ +Y +L+ LC
Sbjct: 117 VHDLGCARPTEPRL--YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALC 174
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + A + EM KG P VT+ T+ L + D L
Sbjct: 175 QNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRL 214
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 141/301 (46%), Gaps = 23/301 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
PNV Y L+ C+ NR+ A + L EM +G P+ VTY +++ +C+
Sbjct: 157 PNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEV 216
Query: 53 -ASLHPNERFEKTIRNA-------EKVFD---EMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
A++ P I A ++VF +M RG++P+V +++ ++ + +A + +
Sbjct: 217 LAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELR 276
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
++ L M G P V T+T++V+ L GR+ DA ++ MV G +PS +YN
Sbjct: 277 MACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILI 336
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
+ D GA + M++ C PN+ TY+ LI F + IWN + S
Sbjct: 337 RGLCSVGDLKGASSILNSMEQHG-CFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGC 395
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 281
++ YT ++ C+K + +A +M+ + P VTF TL R L D R R
Sbjct: 396 KPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSL--CDCRRVGRA 453
Query: 282 L 282
L
Sbjct: 454 L 454
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 127/269 (47%), Gaps = 19/269 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+L+ G R+ A M+ G P+ V+YN+L+ G+C L
Sbjct: 292 PNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDL------ 345
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + + M G P+V ++S ++ +S+A ++ N M G P V
Sbjct: 346 ----KGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVV 401
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++V C A+ L+ +M+ P+ T+N + + A+ ++ +M+
Sbjct: 402 YTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMR 461
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMD---MVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
CVPN TYN LI G+F N D MV E+ +H G E L L +Y ++ GLC+
Sbjct: 462 RHG-CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSH--GIE--LSLVTYNTVVSGLCQ 516
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ +EA + +MI +G+ P TF +
Sbjct: 517 TRMSREAMVFVGKMIVQGIQPNAFTFSAI 545
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 121/272 (44%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV+ Y++LI G+ K + A +M G +PNVV Y +++ C++ +
Sbjct: 362 PNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFN----- 416
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ + D+M + P+ +F+ ++ + +L + M+ G P T
Sbjct: 417 -----QAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRT 471
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ L G DA ++ EM +G+ S TYN + + AM +M
Sbjct: 472 YNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMI 531
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN T++ +I + + M + + ++ YT+L+ LC + K
Sbjct: 532 VQGI-QPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKL 590
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+A Y ++M+ +G+ P VT+ L RG+ ++
Sbjct: 591 VDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRN 622
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 14/224 (6%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
V+D MR G+ P+V ++++++ + ++ + L+ M KG P TY ++V LC
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 205
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFF----KEYRGRKDANGAMKLYRQMKEDDLC 186
R+++A E+L M P A +YN +E+R ++ + M L
Sbjct: 206 KLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQE----VFSVVSDMVGRGL- 255
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+ TY ++ F + M I + + ++ ++T L+ GL + + +A
Sbjct: 256 QPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALD 315
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ M+ +G P V++ L RGL L+ + +++
Sbjct: 316 MWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHG 359
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 10/162 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN + Y LI+G + A + EM G+E ++VTYN +++G+C+
Sbjct: 466 VPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQ--------- 516
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ R A +M V+GI+P+ +FS ++H Y + + +++ L M +
Sbjct: 517 -TRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNIL 575
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
YT ++ LC+ ++ DA L +M+ G+ P+ T+N +
Sbjct: 576 VYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVR 617
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 131/267 (49%), Gaps = 27/267 (10%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF---EKT 64
T+++ G CK +R+D A +F+ EM + GV PN VTY+ L++G + L RF EK
Sbjct: 197 TTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKA 256
Query: 65 -----------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
+ A K +E+R G+ PDV ++S++++ ++RA +
Sbjct: 257 RKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFD 316
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
SL+ L M+ G+ P V TY++++ LC + +DA LL M G P+ TYN
Sbjct: 317 ASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVM 376
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
+ ++Y M + C P++ TY+I++ +D +++ +K S
Sbjct: 377 DGLCKSGKMDEVHRVYEMMLKSR-CSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE 435
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYF 248
G D +Y+M+I LC K +EAC +
Sbjct: 436 GPDAAAYSMVITSLCRAGKLEEACGMY 462
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 154/332 (46%), Gaps = 50/332 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V +Y +I G C+ +R+ A + L +M+E + PNV TY +LLNG+CR
Sbjct: 86 PTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCR---------- 135
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +VF EM+ G +P+ ++ ++ SRA + +L + + + V T
Sbjct: 136 SNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVIT 195
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T++V LC R++DA + + EM + GV P+ TY+ +R + + ++ + + K
Sbjct: 196 CTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEK 255
Query: 182 E---------------DDLC--------------------VPNIHTYNILIGMFMALNRM 206
D LC VP++ TY++LI F +
Sbjct: 256 ARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQF 315
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D E+ ++ + + D+ +Y+ LI+ LC+++K+++A + M G P VT+ ++
Sbjct: 316 DASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSV 375
Query: 267 YRGLIQSDMLRTWRR-----LKKKLDEESITF 293
GL +S + R LK + + +T+
Sbjct: 376 MDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTY 407
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 104/263 (39%), Gaps = 42/263 (15%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G + D +F+++ R K + + +G+ TY VV LC G A
Sbjct: 14 GAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQA 73
Query: 139 EELLGEMVRNGV-SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
EL+ E+ +GV +P+ YN A K+ +M E+ + VPN+ TY IL+
Sbjct: 74 LELVREL--SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESI-VPNVFTYTILL 130
Query: 198 GMFMALNRMDMVREIWNHVKGS-----------------------------------ELG 222
N+ + RE++ +K + EL
Sbjct: 131 NGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELP 190
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
D+ + T ++ GLC+ + +A ++ EM + G+ P +VT+ L G Q L R+
Sbjct: 191 TDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGEL---DRV 247
Query: 283 KKKLDEESITFGSEFQNYHFKPY 305
+ +EE G + + Y
Sbjct: 248 IRFFEEEKARKGGSLEAAAYPGY 270
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y S++ G CK ++D R M++ P+VVTY++++NG+ + L
Sbjct: 367 PNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLD----- 421
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK----EKGICP 117
+A K+F+ ++ PD ++S+V+ RA K + + + M+ IC
Sbjct: 422 -----SAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICR 476
Query: 118 TVATYTSVVKCLCSCGRIEDAEELL 142
+A +V LC R + A ++
Sbjct: 477 ALA---GLVAALCDAKRTDSARRIV 498
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 136/279 (48%), Gaps = 12/279 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y ++I G+ K ++ A EM++RG+ P++ TYN ++N +C+
Sbjct: 213 LPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCK--------- 263
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + AE + +M +G+ PD +++ +++ YS + + ++ M +GI P V
Sbjct: 264 -ARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVV 322
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T S++ LC G+I+DA ++ M G +Y Y + +L+ M
Sbjct: 323 TLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLM 382
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D + P+ H +N+LI + +D I+N ++ + D+ +Y+ +I LC K
Sbjct: 383 LSDGI-APDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGK 441
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL-IQSDMLRT 278
+A + F +MI++G+ P T+ L +G D+L+
Sbjct: 442 MDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKA 480
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 137/304 (45%), Gaps = 46/304 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y SLIYG+ + A R +M +G+ P+VVT N L+ +C+
Sbjct: 283 LPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGK------ 336
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS------------------------- 95
I++A VFD M ++G + D+ S+ I+L+ Y+
Sbjct: 337 ----IKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSH 392
Query: 96 ------RAHKPQLSLDK----LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
+A+ LD+ N M+E+G+ P V TY++V+ LC G+++DA E +M
Sbjct: 393 IFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQM 452
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+ GV+PS TY+ + + D A L QM + P+I +N +I L R
Sbjct: 453 IDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGM-RPDIGCFNFIINNLCKLGR 511
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ + I++ L ++ Y L+ G C K + A + F M+ G+ P V + T
Sbjct: 512 VMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGT 571
Query: 266 LYRG 269
L G
Sbjct: 572 LVNG 575
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 138/301 (45%), Gaps = 28/301 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
P+V Y+++I C+I ++D A +MI++GV P++ TY+ L+ G C L +
Sbjct: 424 PDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDL 483
Query: 61 ---------------FEKTIRN---------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F I N A+ +FD G+ P+V ++ ++ Y
Sbjct: 484 VLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCL 543
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + +L + M GI P V Y ++V C GRI++ L E++ G+ PS
Sbjct: 544 VGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTL 603
Query: 157 YNCFFKE-YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
YN ++ + +K + +M E + + + +TY+I++G + D ++
Sbjct: 604 YNIILHGLFQAGRTVPAKVK-FHEMTESGIAM-DRYTYSIVLGGLFKNSCSDEAILLFKE 661
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ + +D+ + ++I G+ + ++ +EA F + GL+P VT+ + LI+ +
Sbjct: 662 LHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGL 721
Query: 276 L 276
+
Sbjct: 722 V 722
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 124/288 (43%), Gaps = 12/288 (4%)
Query: 6 MYTSLIYGWCKINRIDMA-ERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPNERFEK 63
M ++L+ G C+ R A + L M G P+V +Y ++L +C R S +E
Sbjct: 145 MISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRM 204
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
P+ +++ V+ + + + D N M ++GI P ++TY
Sbjct: 205 MAEGGAVCL---------PNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYN 255
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
VV LC ++ AE +L +MV GV P TYN Y A+++ ++M
Sbjct: 256 CVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQ 315
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
+ +P++ T N L+ ++ R++++ + D+ SY ++++G K +
Sbjct: 316 GI-LPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVD 374
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ F M+ G+ P F L + + ML + ++ E+ +
Sbjct: 375 LTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGV 422
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 2/216 (0%)
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
R + P + ++ I++ +RAH+P+L+L + + G+ +++++ LC R +
Sbjct: 102 RVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAE 161
Query: 138 AEE-LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD-LCVPNIHTYNI 195
A + LL M G P +Y K + + A +L R M E +C+PN YN
Sbjct: 162 ALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNT 221
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
+I F ++ +++N + + DL +Y +++ LC+ + +A +M++KG
Sbjct: 222 VIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKG 281
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+LP T+ +L G + + R+ KK+ + I
Sbjct: 282 VLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGI 317
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 125/308 (40%), Gaps = 12/308 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y L+ + +R + F G++++ G+ + + + LL G+C
Sbjct: 106 PTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEA--------- 156
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG-IC-PTV 119
++T + + M G PDV S+ IVL K + + L M E G +C P
Sbjct: 157 KRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNA 216
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +V+ G + A +L EMV+ G+SP TYNC + + A + RQ
Sbjct: 217 VAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQ 276
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + + +P+ TYN LI + + + + + + D+ + L+ LC+
Sbjct: 277 MVDKGV-LPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHG 335
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
K K+A F M KG +++ + G L L + + I S N
Sbjct: 336 KIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFN 395
Query: 300 YHFKPYRR 307
K Y +
Sbjct: 396 VLIKAYAK 403
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 14/251 (5%)
Query: 33 RGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
R + P + TY +L++ C RA R + T+ F ++ G+ D S +L
Sbjct: 102 RVLSPTLHTYGILMD-CCTRA-----HRPKLTL----AFFGQVLKTGLGIDTIMISNLLR 151
Query: 93 VYSRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
A + +LD L+ M G P V +Y V+K LCS + A+ELL M G
Sbjct: 152 GLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAV 211
Query: 152 --PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P+A YN + D N A L+ +M + + P++ TYN ++ MD
Sbjct: 212 CLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGIS-PDLSTYNCVVNALCKARAMDKA 270
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
I + + D +Y LI+G +WKEA + +M +G+LP VT +L
Sbjct: 271 EAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMAS 330
Query: 270 LIQSDMLRTWR 280
L + ++ R
Sbjct: 331 LCKHGKIKDAR 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN--- 58
PNV +Y +L+ G+CK+ RID E++ +G++P+ YN++L+G+ + P
Sbjct: 564 PNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVK 623
Query: 59 -----------ERFEKTI-----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+R+ +I A +F E+ ++ D+T+ +I++ +
Sbjct: 624 FHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQ 683
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV-SPSAE 155
+ + + D + G+ P+V TY+ ++ L G +E+A+++ M G P+++
Sbjct: 684 IRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQ 743
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
N +E +++ A ++ E + + T +LI +F
Sbjct: 744 LLNHVVRELLEKREIVRAGTYLSKIDERSFSLDH-STTTLLIDLF 787
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 134/306 (43%), Gaps = 32/306 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y SLI+G CK ++D A L EM +RG+ P V +N ++ G+C+
Sbjct: 27 VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALG 86
Query: 61 FEKTIRN-------------------------AEKVFDEMRVRG-IEPDVTSFSIVLHVY 94
+ KT+ A ++F+ M P+V +++ V++
Sbjct: 87 YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ K +++ L+ M E G CP V TY+ +V+ LC GR + LL EM R G P
Sbjct: 147 CKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
YN + + A++L + M C P + TYN L+ +F ++D +
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSG-CYPTVVTYNSLMELFCRSKQVDRAFRLIQ 265
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ D+ +Y +I GLC + +A +M+ +P +T+ T+ GL
Sbjct: 266 VMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC--- 322
Query: 275 MLRTWR 280
+ WR
Sbjct: 323 --KDWR 326
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 134/301 (44%), Gaps = 32/301 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------- 51
+PNV YT++I G CK ++D A L M E G PNV+TY+VL+ G+C+
Sbjct: 133 LPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFT 192
Query: 52 ------RASLHPNERFEKTIRNA---EKVFDE-------MRVRGIEPDVTSFSIVLHVYS 95
R P+ T+ N + DE M G P V +++ ++ ++
Sbjct: 193 LLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFC 252
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
R+ + + + M E+G P V Y +V+ LC R++DA+ LL +MV P
Sbjct: 253 RSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVI 312
Query: 156 TYNCFF----KEYRGRKD--ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
TY+ K++R D A ++ MK+ C PN TY ++I +
Sbjct: 313 TYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG-CPPNAGTYAVVIEGLCRARKSQQA 371
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + SE+ DL S++M+I LC+ A + F M E+ P V + L G
Sbjct: 372 LALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDG 431
Query: 270 L 270
L
Sbjct: 432 L 432
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 131/287 (45%), Gaps = 6/287 (2%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G C+ R+D A+ L +M+ P+V+TY+ +++G+C+ + + +
Sbjct: 274 PDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKL 333
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A ++ + M+ G P+ ++++V+ RA K Q +L L M + + P +++
Sbjct: 334 EA----ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSS 389
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ V+ LC ++ A ++ G M P+ Y + + A++++ M
Sbjct: 390 FSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV 449
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E P + TYN ++ + R++ + + E D SY LI GLC
Sbjct: 450 ESFR--PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCV 507
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+EA + F + KG + + L L + L + KL E
Sbjct: 508 EEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 107 LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-- 164
+ +E+ P TY S++ LC G+++ A ELL EM G+ P +N K
Sbjct: 18 VQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCK 77
Query: 165 RGR-KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223
GR DA G K K C P+I T+NIL+ + R++ +I+ + S L
Sbjct: 78 AGRFGDALGYFKTVAGTK----CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCL 133
Query: 224 -DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ +YT +I+GLC+ K A + M E G P +T+ L GL ++
Sbjct: 134 PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKA 184
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ ++ +I CK + +D A + G M ER +PN V Y L++G L
Sbjct: 384 VPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDG------LSKGGE 437
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K +R VF E+ V P V +++ VL + + ++ + M K P A
Sbjct: 438 VDKAVR----VF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGA 492
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK---DANG 172
+Y ++++ LC +E+A EL + G + YN E +K DA+G
Sbjct: 493 SYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHG 547
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 145/302 (48%), Gaps = 16/302 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V + +I CK ++ A+ F+G M G++PNVVTYN +++G C R
Sbjct: 190 SVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR-------- 241
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A +FD M+ RG++PD ++ + + K + + L MKE G+ PT TY
Sbjct: 242 --VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTY 299
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C+ G +E A + +MVR G+ P+ TYN + A + ++M E
Sbjct: 300 NTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSE 359
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L VP+ TYNILI + + + + + + +YT LI+ L ++ + K
Sbjct: 360 KGL-VPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMK 418
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRG-LIQSDMLRTWRRLKK----KLDEESITFGSEF 297
+A F +++ KG+ P + F L G +M R + LK+ K+ + +TF +
Sbjct: 419 QADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLM 478
Query: 298 QN 299
Q
Sbjct: 479 QG 480
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 150/316 (47%), Gaps = 26/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y S I G CK +++ A L +M E G+ P VTYN L++G C + +L +
Sbjct: 259 PDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDY 318
Query: 62 -EKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+K +R A+ + EM +G+ PD +++I+++ Y R
Sbjct: 319 RDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCR 378
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + M KGI PT TYTS++ L GR++ A++L ++VR G+ P
Sbjct: 379 CGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIM 438
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N + + + A + ++M + + VP+ T+N L+ +++ RE+ +
Sbjct: 439 FNALIDGHCANGNMDRAFAMLKEMDQMKV-VPDEVTFNTLMQGRCREGKVEAARELIEEM 497
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K + D SY LI G ++ K+A + EM+ G P +T+ L +GL +++
Sbjct: 498 KSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEG 557
Query: 277 RTWRRLKKKLDEESIT 292
+L K++ + IT
Sbjct: 558 DHAEQLLKEMISKGIT 573
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 134/268 (50%), Gaps = 15/268 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V ++ + K NR + A EM ++ +VVT+N+++N +C+
Sbjct: 153 IPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCK--------- 203
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E ++ A++ M GI+P+V +++ ++H Y + + + + MK +G+ P
Sbjct: 204 -EGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSY 262
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S + +C G++E+A +L +M G+ P+A TYN Y + + A +M
Sbjct: 263 TYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKM 322
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEK 238
+ L +P + TYN+LI +MD I + SE GL DS Y +LI+G C
Sbjct: 323 VREGL-MPTVSTYNMLIHALFLDCKMDEADGIIKEM--SEKGLVPDSVTYNILINGYCRC 379
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETL 266
K+A EMI KG+ P +VT+ +L
Sbjct: 380 GNVKKAFTLHDEMISKGIQPTRVTYTSL 407
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 130/270 (48%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP V Y LI+ ++D A+ + EM E+G+ P+ VTYN+L+NG CR +
Sbjct: 328 MPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGN------ 381
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A + DEM +GI+P +++ +++V S+ + + + D + KGI P +
Sbjct: 382 ----VKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLI 437
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ +++ C+ G ++ A +L EM + V P T+N + A +L +M
Sbjct: 438 MFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEM 497
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + P+ +YN LI + M + + + L +Y LI GLC+ ++
Sbjct: 498 KSRGI-KPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEE 556
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A Q EMI KG+ P T+ +L G+
Sbjct: 557 GDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 133/290 (45%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I+G+C R++ A M RGV+P+ TY ++G+C+
Sbjct: 224 PNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCK---------- 273
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A + ++M+ G+ P +++ ++ Y +++ D + M +G+ PTV+T
Sbjct: 274 EGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVST 333
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ L ++++A+ ++ EM G+ P + TYN Y + A L+ +M
Sbjct: 334 YNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMI 393
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P TY LI + RM +++ + + DL + LI G C
Sbjct: 394 SKGI-QPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNM 452
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A EM + ++P +VTF TL +G + + R L +++ I
Sbjct: 453 DRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGI 502
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 120/264 (45%), Gaps = 11/264 (4%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+Y LI C++ R D A M +GV P+V N +L+ + + R EK
Sbjct: 123 LYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLK------SNRTEK-- 174
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
A ++ EM I+ V +F+I+++V + K + + + + M+ GI P V TY ++
Sbjct: 175 --AWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTI 232
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ CS GR+E A + M GV P + TY F A + +MKE L
Sbjct: 233 IHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGL 292
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
P TYN LI + ++M + + + L + +Y MLIH L K EA
Sbjct: 293 -RPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEAD 351
Query: 246 QYFVEMIEKGLLPQKVTFETLYRG 269
EM EKGL+P VT+ L G
Sbjct: 352 GIIKEMSEKGLVPDSVTYNILING 375
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 107/241 (44%), Gaps = 1/241 (0%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + FD M+ +G+ P V + + +L ++ ++++ + + M I +V T+ ++
Sbjct: 139 DAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMI 198
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G+++ A+E +G M G+ P+ TYN Y R GA ++ MK +
Sbjct: 199 NVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGV- 257
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+ +TY I +++ + +K L +Y LI G C K + A
Sbjct: 258 KPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFD 317
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPYR 306
Y +M+ +GL+P T+ L L + + K++ E+ + S N Y
Sbjct: 318 YRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYC 377
Query: 307 R 307
R
Sbjct: 378 R 378
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 23/305 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+ + SLI G+C+ N++D+A +M RG +VV+Y L+ G+C
Sbjct: 186 PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 245
Query: 52 -----RASLHPNERFEKTIRNAEK------VFDEMRVRGIEPDVTSFSIVLHVYSRAHKP 100
+ +H K + NAE+ + M+ G P +++ V+ R K
Sbjct: 246 FGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKA 305
Query: 101 QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
+ + + L M EKG+ P V T T+V+ C GR+ DA +L M G P+ TYN
Sbjct: 306 KEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNAL 365
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
+ + + AM L +M+ + P+ TYN+LI ++ + ++G
Sbjct: 366 VQGFCNEGKVHKAMTLLNKMRACGV-NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 424
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR-TW 279
L D +Y LI+ LC+ + +AC F + +G+ P VTF +L GL +S W
Sbjct: 425 LIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAW 484
Query: 280 RRLKK 284
+ L+K
Sbjct: 485 KFLEK 489
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 137/303 (45%), Gaps = 22/303 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ MY +L+ G C R + L M E G P+ Y +++ CR
Sbjct: 252 PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCR---------- 301
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + AE++ EM +G+ P V + + V++ Y + + +L L MK +G P V T
Sbjct: 302 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWT 361
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V+ C+ G++ A LL +M GV+P A TYN + A +L R M+
Sbjct: 362 YNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 421
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D L + + +TYN LI R D +++ ++ + + ++ LI+GLC+ K
Sbjct: 422 GDGL-IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 480
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
A ++ +M+ G P T+ + L K K +E ++F E
Sbjct: 481 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLC-----------KMKGSQEGLSFIGEMLQKD 529
Query: 302 FKP 304
KP
Sbjct: 530 VKP 532
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 130/321 (40%), Gaps = 61/321 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + SLI G CK + D+A +FL +M+ G P+ TY+ + +C+
Sbjct: 462 PNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM--------- 512
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + EM + ++P +++IV+H + L M G P V T
Sbjct: 513 -KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 571
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+ ++ C GR+ +AE +L EM +NGV+ YN + + A+ + +QM
Sbjct: 572 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 631
Query: 182 ------------------------EDDLCV---------------------------PNI 190
ED L + PN
Sbjct: 632 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 691
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
TY+ ++ F R + + + +K + L+ D YT L+ C+ +++ +A
Sbjct: 692 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCS 751
Query: 251 MIEKGLLPQKVTFETLYRGLI 271
MI+ G +PQ ++++ L GLI
Sbjct: 752 MIQHGFIPQLMSYQHLLSGLI 772
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 19/272 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V T++I +CK R+ A R L M RG +PNV TYN L+ G C +H
Sbjct: 322 PCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH----- 376
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++MR G+ PD ++++++ + + L M+ G+ T
Sbjct: 377 -----KAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 431
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GR + A L + G+ P+A T+N A+ A K +M
Sbjct: 432 YNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV 491
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD----SYTMLIHGLCE 237
C P+ +TY+ I L +M +E + + G L D+ +YT++IH L +
Sbjct: 492 SAG-CTPDTYTYSSFIE---HLCKMKGSQEGLSFI-GEMLQKDVKPSTVNYTIVIHKLLK 546
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ + + + EM+ G P VT+ T R
Sbjct: 547 ERNYGLVARTWGEMVSSGCNPDVVTYTTSMRA 578
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 122/296 (41%), Gaps = 26/296 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +L+ G+C ++ A L +M GV P+ VTYN+L+ G C + R
Sbjct: 357 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL 416
Query: 62 EKTIR-------------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ + A +FD + RGI+P+ +F+ +++ +
Sbjct: 417 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 476
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ K ++ L M G P TY+S ++ LC ++ +GEM++ V PS
Sbjct: 477 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 536
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + ++ + + +M C P++ TY + + R++ + +
Sbjct: 537 YTIVIHKLLKERNYGLVARTWGEMVSSG-CNPDVVTYTTSMRAYCIEGRLNEAENVLMEM 595
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ + +D +Y L+ G + A +M +P + T+ L R L++
Sbjct: 596 SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVR 651
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 116/296 (39%), Gaps = 45/296 (15%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGV-EPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+ SL+ + +A R M P TYN ++ +CRRA L R+
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRY---- 175
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
M G PD +F+ ++ Y R ++ ++ D + M +G V +Y ++
Sbjct: 176 ------LSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATL 229
Query: 126 VKCLCSCGRIEDAEELLGEMVRN-------------------------------GVSPSA 154
++ LC GRI++A EL GEM + G PS
Sbjct: 230 IEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPST 289
Query: 155 ETYNCFFKEYRGR-KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
Y ++R R + A A ++ ++M E L P + T +I + RM +
Sbjct: 290 RAYAAVV-DFRCRERKAKEAEEMLQEMFEKGL-APCVVTCTAVINAYCKEGRMSDALRVL 347
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+K ++ +Y L+ G C + K +A +M G+ P VT+ L RG
Sbjct: 348 ELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRG 403
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 130/271 (47%), Gaps = 12/271 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ YT+LI G+CK ++ A +++ EM+ R EPNV+TYN ++ G+C
Sbjct: 318 MPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLC---------- 367
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A+++ MR+ G++ +V + + +L K + L M G+
Sbjct: 368 LNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAK 427
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y VV C G+ +DA LL EM G++PS ++N F+ + A + RQM
Sbjct: 428 AYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQM 487
Query: 181 KEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
K+ C PN +Y+ +I G+ A RM V E + + + LD Y+ L+ G CE
Sbjct: 488 KQLG-CTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDG 546
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A + F EM++ G + +F +GL
Sbjct: 547 NADMAMRLFCEMLDMGYVINLESFLAFVKGL 577
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGV-EPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
Y +++ + K NRI +A ++++ GV +P+V TY ++ G C+ I
Sbjct: 220 YNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMG----------MI 269
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVATYTS 124
NA+ VFDEM G +P++ +++ +++ + + + ++ ++ M E C P TYT+
Sbjct: 270 ENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTT 326
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ C G +E+A + + EMV P+ TYN + + A ++ +M+ +
Sbjct: 327 LIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNG 386
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
L N+ T+ ++ + ++D + G + D +Y ++++ C+ K +A
Sbjct: 387 L-KDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDA 445
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EM +G+ P +F ++R L++S
Sbjct: 446 ISLLKEMKSRGINPSVSSFNAVFRILVES 474
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLN-FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
S++ +L V+ +A++ L+ + +KE + P V+TYT++++ C G IE+A+ + E
Sbjct: 219 SYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDE 278
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
M G P+ TYN + + AMK+ QM E + C+P+ TY LI +
Sbjct: 279 M---GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRG 335
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
++ + + ++ +Y +I+GLC EA + M GL T
Sbjct: 336 ELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHT 395
Query: 265 TLYRGL 270
++ +GL
Sbjct: 396 SILKGL 401
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 134/306 (43%), Gaps = 32/306 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y SLI+G CK ++D A L EM +RG+ P V +N ++ G+C+
Sbjct: 27 VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALG 86
Query: 61 FEKTIRN-------------------------AEKVFDEMRVRG-IEPDVTSFSIVLHVY 94
+ KT+ A ++F+ M P+V +++ V++
Sbjct: 87 YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ K +++ L+ M E G CP V TY+ +V+ LC GR + LL EM R G P
Sbjct: 147 CKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
YN + + A++L + M C P + TYN L+ +F ++D +
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSG-CYPTVVTYNSLMELFCRSKQVDRAFRLIQ 265
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ D+ +Y +I GLC + +A +M+ +P +T+ T+ GL
Sbjct: 266 VMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC--- 322
Query: 275 MLRTWR 280
+ WR
Sbjct: 323 --KDWR 326
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 134/301 (44%), Gaps = 32/301 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------- 51
+PNV YT++I G CK ++D A L M E G PNV+TY+VL+ G+C+
Sbjct: 133 LPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFT 192
Query: 52 ------RASLHPNERFEKTIRNA---EKVFDE-------MRVRGIEPDVTSFSIVLHVYS 95
R P+ T+ N + DE M G P V +++ ++ ++
Sbjct: 193 LLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFC 252
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
R+ + + + M E+G P V Y +V+ LC R++DA+ LL +MV P
Sbjct: 253 RSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVI 312
Query: 156 TYNCFF----KEYRGRKD--ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
TY+ K++R D A ++ MK+ C PN TY ++I +
Sbjct: 313 TYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG-CPPNAGTYAVVIEGLCRARKSQQA 371
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + SE+ DL S++M+I LC+ A + F M E+ P V + L G
Sbjct: 372 LALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDG 431
Query: 270 L 270
L
Sbjct: 432 L 432
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 131/287 (45%), Gaps = 6/287 (2%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G C+ R+D A+ L +M+ P+V+TY+ +++G+C+ + + +
Sbjct: 274 PDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKL 333
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A ++ + M+ G P+ ++++V+ RA K Q +L L M + + P +++
Sbjct: 334 EA----ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSS 389
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ V+ LC ++ A ++ G M P+ Y + + A++++ M
Sbjct: 390 FSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV 449
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E P + TYN ++ + R++ + + E D SY LI GLC
Sbjct: 450 ESFR--PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCV 507
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+EA + F + KG + + L L + L + KL E
Sbjct: 508 EEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 107 LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-- 164
+ +E+ P TY S++ LC G+++ A ELL EM G+ P +N +
Sbjct: 18 VQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCK 77
Query: 165 RGR-KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223
GR DA G K K C P+I T+NIL+ + R++ +I+ + S L
Sbjct: 78 AGRFGDALGYFKTVAGTK----CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCL 133
Query: 224 -DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ +YT +I+GLC+ K A + M E G P +T+ L GL ++
Sbjct: 134 PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKA 184
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ ++ +I CK + +D A + G M ER +PN V Y L++G L
Sbjct: 384 VPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDG------LSKGGE 437
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K +R VF E+ V P V +++ VL + + ++ + M K P A
Sbjct: 438 VDKAVR----VF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGA 492
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK---DANG 172
+Y ++++ LC +E+A EL + G + YN E +K DA+G
Sbjct: 493 SYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHG 547
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 132/268 (49%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +T+LI+G+ R + +M G+EPN+ TYN+L+ CR F
Sbjct: 71 PNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGE------F 124
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A +F+EM +GI +V S++ ++ R K + + L M+ +GI P+V T
Sbjct: 125 ER----ARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVT 180
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V G++ +A +M G PSA TYN + +D A + + MK
Sbjct: 181 FNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMK 240
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L P TY ILI F N MD E++ ++ + L +D+ +Y +L+H LC +
Sbjct: 241 ERGLA-PTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNM 299
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
K+A + F + EKGL V ++ L G
Sbjct: 300 KDARKLFQSIGEKGLQVGNVIYDMLIYG 327
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 15/264 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y L+ WC+ + A EM +G+ NVV+YN L+ G+CR
Sbjct: 106 PNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCR---------- 155
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +++A ++ + MR GI P V +F++++ Y +A K +L N M+ G P+ T
Sbjct: 156 YRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVT 215
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C + A +M G++P+ TY + D + A +++ M+
Sbjct: 216 YNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGME 275
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEKQ 239
+ L V ++ TY +L+ M R+++ + E GL + + Y MLI+G +
Sbjct: 276 KAGLEV-DVRTYGVLVHALCMEGNMKDARKLFQSI--GEKGLQVGNVIYDMLIYGYGREG 332
Query: 240 KWKEACQYFVEMIEKGLLPQKVTF 263
+A + +EM +KG +P ++
Sbjct: 333 SSYKAMKLIMEMRKKGFVPNSASY 356
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + L+ G+ K ++ A F +M G +P+ VTYN L+ G CR
Sbjct: 176 PSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCR---------- 225
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A + F +M+ RG+ P +++I++ ++R + + + M++ G+ V T
Sbjct: 226 ARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRT 285
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V LC G ++DA +L + G+ Y+ Y + AMKL +M+
Sbjct: 286 YGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMR 345
Query: 182 EDDLCVPNIHTYNILI 197
+ VPN +Y + I
Sbjct: 346 KKGF-VPNSASYGLTI 360
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 25/177 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+ Y +LI G+C+ + A R +M ERG+ P VTY +L++ R
Sbjct: 211 PSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEM 270
Query: 52 -----RASLHPNER----------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+A L + R E +++A K+F + +G++ + ++++ Y R
Sbjct: 271 FAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGR 330
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
++ + M++KG P A+Y ++ LC+ G+ +AE L+ +MVR GV S
Sbjct: 331 EGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTS 387
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
K + LD+ + T L+HG C EA + F M GL P +VTF L G
Sbjct: 29 AKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHG 82
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 148/301 (49%), Gaps = 3/301 (0%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP--NE 59
P+V YT++I G+ K D A EM++RG+ P+VVTY+ ++ +C+ ++ +
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSH 253
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
E + +EK+FD M G++PD+ ++S ++ Y A K ++ L+ M G+ P
Sbjct: 254 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNT 313
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY++++ C R+EDA L EM +GVSP TYN + + A +LY +
Sbjct: 314 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 373
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ E + + TYNI++ D +++ ++ +L L+ ++ ++I L +
Sbjct: 374 ITESGTQI-ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVG 432
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ EA FV GL+P T+ + +I +L +L +++ T S N
Sbjct: 433 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 492
Query: 300 Y 300
+
Sbjct: 493 F 493
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 135/287 (47%), Gaps = 26/287 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIER---GVEPNVVTYNVLLNGVCRRASLHP 57
+PNV Y +L+ G C NR A L M + G P+VV+Y ++NG +
Sbjct: 155 IPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK------ 208
Query: 58 NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---KP--------QLSLDK 106
E A + EM RGI PDV ++S ++ + KP + +K
Sbjct: 209 ----EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEK 264
Query: 107 L-NFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR 165
L + M G+ P + TY++++ C G++++A +LL MV G+ P+ TY+ Y
Sbjct: 265 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 324
Query: 166 GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL 225
A+ L+++M+ + P+I TYNI++ R +E++ + S ++L
Sbjct: 325 KISRMEDALVLFKEMESSGVS-PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 383
Query: 226 DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+Y +++HGLC+ + +A Q F + L + TF + L++
Sbjct: 384 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 430
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 144/327 (44%), Gaps = 48/327 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RRAS----- 54
P++ Y LI C+ R+D+ LG +I++G +T+ LL G+C +R S
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 55 -----------------------LHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
L R ++ + + D+ R G PDV S++ V+
Sbjct: 145 VLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADD-RGGGSPPDVVSYTTVI 203
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC------------GRIEDAE 139
+ + + + + M ++GI P V TY+S++ LC GR+ ++E
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESE 263
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
+L MVR GV P TY+ Y + AMKL M L PN TY+ LI
Sbjct: 264 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGL-KPNTVTYSTLING 322
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ ++RM+ ++ ++ S + D+ +Y +++ GL + ++ A + +V + E G +
Sbjct: 323 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 382
Query: 260 KVTFETLYRGL----IQSDMLRTWRRL 282
T+ + GL + D L+ ++ L
Sbjct: 383 LSTYNIILHGLCKNKLTDDALQMFQNL 409
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 8/225 (3%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
+A VFDE+ RG + + L +R H P ++ + N M G + P + TY
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C C GR++ LG +++ G A T+ K K + AM + + +
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV---KGSELGLDLDSYTMLIHGLCEKQK 240
C+PN+ +YN L+ NR E+ + + +G D+ SYT +I+G ++
Sbjct: 152 LGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD-MLRTWRRLKK 284
+A + EM+++G+LP VT+ ++ L + M + W K+
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKE 256
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 41/281 (14%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V P++ TY +L+ CR L + + N K +G + +F+ +L
Sbjct: 83 VTPDLCTYGILIGCCCRAGRL---DLGFAALGNVIK-------KGFRVEAITFTPLLKGL 132
Query: 95 SRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV--RNGVS 151
+ ++D L M E G P V +Y +++ LC R ++A ELL M R G S
Sbjct: 133 CADKRTSDAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGS 192
Query: 152 PS-----AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
P N FFKE D++ A Y +M + + +P++ TY+ +I M
Sbjct: 193 PPDVVSYTTVINGFFKE----GDSDKAYSTYHEMLDRGI-LPDVVTYSSIIAALCKGQAM 247
Query: 207 DMVREIWNHVKGS-------------ELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEM 251
D + W+H K +G+ D+ +Y+ LI G C K EA + M
Sbjct: 248 D---KPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGM 304
Query: 252 IEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ GL P VT+ TL G + + L K+++ ++
Sbjct: 305 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 345
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 82/187 (43%), Gaps = 25/187 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPNER 60
PN Y++LI G+CKI+R++ A EM GV P+++TYN++L G+ + R + E
Sbjct: 311 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 370
Query: 61 F------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ K +A ++F + + ++ + +F+I++ +
Sbjct: 371 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 430
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D G+ P TY + + + G +E+ ++L M NG + +
Sbjct: 431 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGM 490
Query: 157 YNCFFKE 163
N +E
Sbjct: 491 LNFIVRE 497
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 148/301 (49%), Gaps = 3/301 (0%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP--NE 59
P+V YT++I G+ K D A EM++RG+ P+VVTY+ ++ +C+ ++ +
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSH 253
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
E + +EK+FD M G++PD+ ++S ++ Y A K ++ L+ M G+ P
Sbjct: 254 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNT 313
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY++++ C R+EDA L EM +GVSP TYN + + A +LY +
Sbjct: 314 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 373
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ E + + TYNI++ D +++ ++ +L L+ ++ ++I L +
Sbjct: 374 ITESGTQI-ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVG 432
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ EA FV GL+P T+ + +I +L +L +++ T S N
Sbjct: 433 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 492
Query: 300 Y 300
+
Sbjct: 493 F 493
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 135/287 (47%), Gaps = 26/287 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIER---GVEPNVVTYNVLLNGVCRRASLHP 57
+PNV Y +L+ G C NR A L M + G P+VV+Y ++NG +
Sbjct: 155 IPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK------ 208
Query: 58 NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---KP--------QLSLDK 106
E A + EM RGI PDV ++S ++ + KP + +K
Sbjct: 209 ----EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEK 264
Query: 107 L-NFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR 165
L + M G+ P + TY++++ C G++++A +LL MV G+ P+ TY+ Y
Sbjct: 265 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 324
Query: 166 GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL 225
A+ L+++M+ + P+I TYNI++ R +E++ + S ++L
Sbjct: 325 KISRMEDALVLFKEMESSGVS-PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 383
Query: 226 DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+Y +++HGLC+ + +A Q F + L + TF + L++
Sbjct: 384 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 430
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 144/327 (44%), Gaps = 48/327 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RRAS----- 54
P++ Y LI C+ R+D+ LG +I++G +T+ LL G+C +R S
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 55 -----------------------LHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
L R ++ + + D+ R G PDV S++ V+
Sbjct: 145 VLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADD-RGGGSPPDVVSYTTVI 203
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC------------GRIEDAE 139
+ + + + + M ++GI P V TY+S++ LC GR+ ++E
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESE 263
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
+L MVR GV P TY+ Y + AMKL M L PN TY+ LI
Sbjct: 264 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGL-KPNTVTYSTLING 322
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ ++RM+ ++ ++ S + D+ +Y +++ GL + ++ A + +V + E G +
Sbjct: 323 YCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 382
Query: 260 KVTFETLYRGL----IQSDMLRTWRRL 282
T+ + GL + D L+ ++ L
Sbjct: 383 LSTYNIILHGLCKNKLTDDALQMFQNL 409
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 8/225 (3%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
+A VFDE+ RG + + L +R H P ++ + N M G + P + TY
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C C GR++ LG +++ G A T+ K K + AM + + +
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV---KGSELGLDLDSYTMLIHGLCEKQK 240
C+PN+ +YN L+ NR E+ + + +G D+ SYT +I+G ++
Sbjct: 152 LGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD-MLRTWRRLKK 284
+A + EM+++G+LP VT+ ++ L + M + W K+
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKE 256
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 41/281 (14%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V P++ TY +L+ CR L + + N K +G + +F+ +L
Sbjct: 83 VTPDLCTYGILIGCCCRAGRL---DLGFAALGNVIK-------KGFRVEAITFTPLLKGL 132
Query: 95 SRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV--RNGVS 151
+ ++D L M E G P V +Y +++ LC R ++A ELL M R G S
Sbjct: 133 CADKRTSDAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGS 192
Query: 152 PS-----AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
P N FFKE D++ A Y +M + + +P++ TY+ +I M
Sbjct: 193 PPDVVSYTTVINGFFKE----GDSDKAYSTYHEMLDRGI-LPDVVTYSSIIAALCKGQAM 247
Query: 207 DMVREIWNHVKGS-------------ELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEM 251
D + W+H K +G+ D+ +Y+ LI G C K EA + M
Sbjct: 248 D---KPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGM 304
Query: 252 IEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ GL P VT+ TL G + + L K+++ ++
Sbjct: 305 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 345
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 82/187 (43%), Gaps = 25/187 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPNER 60
PN Y++LI G+CKI+R++ A EM GV P+++TYN++L G+ + R + E
Sbjct: 311 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 370
Query: 61 F------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ K +A ++F + + ++ + +F+I++ +
Sbjct: 371 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 430
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D G+ P TY + + + G +E+ ++L M NG + +
Sbjct: 431 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGM 490
Query: 157 YNCFFKE 163
N +E
Sbjct: 491 LNFIVRE 497
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G+CK+N+I+ A + L M RG P++VTYN+++ +C R
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNR--------- 195
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A V D++ + P V +++I++ ++ L M +G+ P + T
Sbjct: 196 -RKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYT 254
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ +C G +E A EL+ + G P +YN + + + + KL +M
Sbjct: 255 YNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMF 314
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN TY+ILI R+D + + EL D SY LI LC++ +
Sbjct: 315 SRG-CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRL 373
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
A MI G LP V + T+ L ++
Sbjct: 374 DLAIGIMDYMISNGCLPDIVNYNTILAALCKN 405
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 142/305 (46%), Gaps = 46/305 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y ++I G CK ++ A + + +G EP+V++YN+LL RA L+ +
Sbjct: 249 LPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILL-----RAFLNQGKW 303
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E EK+ EM RG EP+ ++SI++ R + ++ L M EK + P
Sbjct: 304 DE-----GEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTY 358
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y ++ LC GR++ A ++ M+ NG P YN +AN A++++ ++
Sbjct: 359 SYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 418
Query: 181 KEDDLCVPNIHTYNILI-------------GMFMA-------------------LNRMDM 208
+ C PN+ +YN +I GM A L R +
Sbjct: 419 RGMG-CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGL 477
Query: 209 VRE---IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
V E + + ++ S + SY +++ GLC+ ++ +A F EMIEKG P + T+
Sbjct: 478 VEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYIL 537
Query: 266 LYRGL 270
L G+
Sbjct: 538 LIEGI 542
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 136/306 (44%), Gaps = 26/306 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP V YT LI I+ A + L EM+ RG+ P++ TYN ++ G+C+
Sbjct: 214 MPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK--------- 264
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A ++ + +G EPDV S++I+L + K + M +G P
Sbjct: 265 -EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 323
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYR 178
TY+ ++ LC GRI++A +L M+ ++P +Y+ GR D A+ +
Sbjct: 324 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDL--AIGIMD 381
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M + C+P+I YN ++ + EI+N ++G ++ SY +I L
Sbjct: 382 YMISNG-CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSC 440
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
A MI KG+ P ++T+ +L L + ++ EE+I + +
Sbjct: 441 GDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLV-----------EEAIGLLDDME 489
Query: 299 NYHFKP 304
F+P
Sbjct: 490 QSGFRP 495
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 131/273 (47%), Gaps = 20/273 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + T LI G+ I+ A R + E++E EP+V YN +++G C+
Sbjct: 111 PDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKV--------- 160
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A +V + M+ RG PD+ +++I++ K L+L L+ + PTV T
Sbjct: 161 -NQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVIT 219
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ G I +A +LL EM+ G+ P TYN + A +L +
Sbjct: 220 YTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLT 279
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMD----MVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
C P++ +YNIL+ F+ + D +V E+++ +G E + +Y++LI LC
Sbjct: 280 SKG-CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFS--RGCE--PNKVTYSILISSLCR 334
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ EA MIEK L P +++ L L
Sbjct: 335 FGRIDEAISVLKVMIEKELTPDTYSYDPLISAL 367
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 115/256 (44%), Gaps = 12/256 (4%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
CK + + + FL ++ +G P+V+ L+ G K I A +V E
Sbjct: 89 CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNF----------KNIEKASRVM-E 137
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
+ EPDV +++ V+ + + ++ + + LN MK +G P + TY ++ LC+ +
Sbjct: 138 ILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 197
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+ A +L +++ + P+ TY + N AMKL +M L +P+++TYN
Sbjct: 198 LGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGL-LPDMYTYN 256
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
+I ++ E+ + D+ SY +L+ + KW E + EM +
Sbjct: 257 AIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 316
Query: 255 GLLPQKVTFETLYRGL 270
G P KVT+ L L
Sbjct: 317 GCEPNKVTYSILISSL 332
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 10/149 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I A + MI +G++P+ +TYN L++ +CR
Sbjct: 425 PNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCR---------- 474
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A + D+M G P V S++IVL + + ++ M EKG P T
Sbjct: 475 DGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETT 534
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
Y +++ + G +A EL + V
Sbjct: 535 YILLIEGIGFAGWRTEAMELANSLFSRDV 563
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 130/273 (47%), Gaps = 14/273 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +L+ G CK +R+D A + E +R P+VVTYN L+ A+L R
Sbjct: 80 PNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM------AALFQLGRV 133
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + F +M G P + SF+ ++ RA + +L+ N M ++ P + T
Sbjct: 134 DEAL----ATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 189
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ V+ LC ++++A++LL MV G P Y + + A+ L R+M
Sbjct: 190 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 249
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C+P++ TY ++I + R+D EI+ + ++ ++ +Y+ LI G C +
Sbjct: 250 SQG-CIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 308
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
E + EM + P VT+ T+ GL D
Sbjct: 309 DEGGKVMREMACR---PNVVTYNTMIWGLSMVD 338
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 53/272 (19%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + + ++I G C+ R+ A EMI+R PN+VTY+V+++G+C+ L
Sbjct: 149 VPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLD---- 204
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A+++ D M G PD+ +++ ++ +S A + +L L M +G P V
Sbjct: 205 ------EAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVV 258
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYR 178
TYT V+ LC GR++DA E+ E+V N SP+ TY+ Y R D G K+ R
Sbjct: 259 TYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGG--KVMR 316
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M C PN+ TYN + IW GL
Sbjct: 317 EMA----CRPNVVTYNTM---------------IW--------------------GLSMV 337
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ +EA F EM E G +P T+ L R L
Sbjct: 338 DRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 28/294 (9%)
Query: 3 NVKMYTSLIYGWCKINRIDMA-ERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-ER 60
N + + ++ G C+ R+ A E F + +P+VV+Y L+NG+C+ + +
Sbjct: 9 NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68
Query: 61 FEKTIR-------------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
F K + A V E R R PDV +++ ++
Sbjct: 69 FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALF 128
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + +L M E+G PT+ ++ +++ LC R+ DA E+ EM+ P+
Sbjct: 129 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 188
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY+ + A +L +M + C P++ Y L+ F A R+D +
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSEG-CRPDLVAYTPLVLGFSAAGRLDSALGLLRR 247
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ D+ +YT++I LC+ + +A + F E++ P VT+ L G
Sbjct: 248 MVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGG 301
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVATYTSVVKCLCSCG 133
M V G++ + + SI+L R + +L+ + E P V +YT+++ LC G
Sbjct: 1 MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60
Query: 134 RIEDAEELLGEMVR-NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
R++ A +L +MV G P+A TYN + + A + + ++ D P++ T
Sbjct: 61 RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDF-APDVVT 119
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
YN L+ L R+D + + L S+ +I GLC ++ +A + F EMI
Sbjct: 120 YNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMI 179
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
++ P VT+ + GL +SD L ++L ++ E
Sbjct: 180 DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEG 217
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 137/272 (50%), Gaps = 15/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +LI G+CKI +++ AE + +M RGV N + +N +++G CR+
Sbjct: 281 PNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRK--------- 331
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++ M GIE DV +++ + RA++ + + L M EKG+ P +
Sbjct: 332 -NMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVS 390
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C+ G + +A L EM NG PS TYN Y + A + ++M+
Sbjct: 391 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEME 450
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L VP+I++Y L+ ++D+ ++ +K +L +YT LI GL ++ +
Sbjct: 451 KKGL-VPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRS 509
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+EA Q + M+ GL P + LY L+ S
Sbjct: 510 EEAFQLYDNMLGDGLTPD----DALYSALVGS 537
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 138/307 (44%), Gaps = 26/307 (8%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS---------LHPNER 60
++ G+CK R+ A + L EM GV+ N + YN LL+ R + NE
Sbjct: 149 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 208
Query: 61 FEKT----------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL 104
E T I E VF+EM+ + + DV +S V++ Y RA + +
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 268
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
+ + GI P TY +++ C G++E AE L+ +M GV + +N Y
Sbjct: 269 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328
Query: 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
+ + A+++ M++ + + +++TYN L NRMD + + + + +
Sbjct: 329 CRKNMVDKALEIKMIMEKMGIEL-DVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN 387
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
SYT LI C + EA + F EM G P VT+ + G I+ +R R KK
Sbjct: 388 HVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKK 447
Query: 285 KLDEESI 291
+++++ +
Sbjct: 448 EMEKKGL 454
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 10/170 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+LI C + A R EM G EP++VTYNV+++G ++ S+ ERF
Sbjct: 386 PNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERF 445
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K EM +G+ PD+ S++ ++H + K ++L MK++G P +
Sbjct: 446 KK----------EMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVA 495
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
YT+++ L GR E+A +L M+ +G++P Y+ K N
Sbjct: 496 YTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQN 545
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y +L++G C ++D+A R EM +RG +PN+V Y L++G+ +
Sbjct: 455 VPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAK--------- 505
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
E A +++D M G+ PD +S ++
Sbjct: 506 -EGRSEEAFQLYDNMLGDGLTPDDALYSALV 535
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 141/330 (42%), Gaps = 62/330 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y S+I G CK+ + A FL +MI R PN VTYN L++ +C+ +
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 62 EKTI-------------------------RNAEKVFDEMRVRGIEPD------------- 83
+ + R A ++F+EMR +G EPD
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 84 ----------------------VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
V +++ ++ + +A+K + + + + M+ G+ T
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVT 507
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC R+EDA +L+ +M+ G P TYN + D A + + M
Sbjct: 508 YNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P+I TY LI R+++ ++ ++ + L +Y +I GL K+K
Sbjct: 568 SNG-CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKT 626
Query: 242 KEACQYFVEMIEKG-LLPQKVTFETLYRGL 270
EA F EM+E+ P V++ ++RGL
Sbjct: 627 TEAINLFREMLEQNEAAPDAVSYRIVFRGL 656
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 139/278 (50%), Gaps = 12/278 (4%)
Query: 10 LIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
+++G+CK R++ A F+ EM + G P+ T+N L+NG+C+ +++A
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH----------VKHA 314
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
++ D M G +PDV +++ V+ + + + +++ L+ M + P TY +++
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLIST 374
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC ++E+A EL + G+ P T+N + ++ AM+L+ +M+ C P
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEP 433
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
+ TYN+LI + ++D + ++ S + +Y LI G C+ K +EA + F
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIF 493
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EM G+ VT+ TL GL +S + +L ++
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQM 531
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 52/297 (17%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +LI G+CK N+I AE EM GV N VTYN L++G+C+
Sbjct: 469 SVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK----------S 518
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ + +A ++ D+M + G +PD +++ +L + R + + D + M G P + TY
Sbjct: 519 RRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC GR+E A +LL + G++ + YN + ++ A+ L+R+M E
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ-KW 241
+ P D SY ++ GLC
Sbjct: 639 QNEAAP-----------------------------------DAVSYRIVFRGLCNGGGPI 663
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL------KKKLDEESIT 292
+EA + VE++EKG +P+ + L GL+ M T +L K + EE ++
Sbjct: 664 REAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVS 720
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 138/295 (46%), Gaps = 10/295 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ K +T+++ G+ + +D A R +M+E G + V+ NV+++G C+ +
Sbjct: 221 VPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALN 280
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F + + N + F PD +F+ +++ +A + +++ ++ M ++G P V
Sbjct: 281 FIQEMSNQDGFF---------PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY SV+ LC G +++A E L +M+ SP+ TYN A +L R +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P++ T+N LI + E++ ++ D +Y MLI LC K K
Sbjct: 392 TSKGI-LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
EA +M G +T+ TL G +++ +R + +++ ++ S
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNS 505
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 134/315 (42%), Gaps = 33/315 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
P+ Y ++ N + + E +M G++P+V T+NVL+ +CR L P
Sbjct: 152 PDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211
Query: 58 -----------NERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+E+ TI A ++ ++M G S ++++H + +
Sbjct: 212 LEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271
Query: 97 AHKPQLSLDKLNFMKE----KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+ + D LNF++E G P T+ ++V LC G ++ A E++ M++ G P
Sbjct: 272 EGRVE---DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
TYN + A++ QM D C PN TYN LI N+++ E+
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEFLDQMITRD-CSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ + D+ ++ LI GLC + + A + F EM KG P + T+ L L
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 273 SDMLRTWRRLKKKLD 287
L + K+++
Sbjct: 448 KGKLDEALNMLKQME 462
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 15/270 (5%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G++P+ YN +LN + +L + E +M V GI+PDV++F++++
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNNL----------KLVEIAHAKMSVWGIKPDVSTFNVLIKA 198
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
RAH+ + ++ L M G+ P T+T++++ G ++ A + +MV G S S
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
+ N + A+ ++M D P+ +T+N L+ + EI
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + D+ +Y +I GLC+ + KEA ++ +MI + P VT+ TL L +
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKE 378
Query: 274 DMLRTWRRLKKKLDEESI-----TFGSEFQ 298
+ + L + L + I TF S Q
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQ 408
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 128/264 (48%), Gaps = 10/264 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V YT+LI + + R + + L M + P+++TYN ++N C R L +E
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVIN-ACARGGLD----WE 229
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ +F EMR GI+PD+ +++ +L + + M + GI P + TY
Sbjct: 230 GLL----GLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTY 285
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ +V+ R+E +LLGEM G P +YN + Y AM ++ QM+
Sbjct: 286 SHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 345
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C PN +TY++L+ +F R D VR+++ +K S D +Y +LI E +K
Sbjct: 346 AG-CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
E F +M+E+ + P T+E +
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGI 428
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 146/335 (43%), Gaps = 33/335 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLG---EMIERGVEPNVVTYNVLLN-----GVCRRA 53
P++ Y ++I C +D E LG EM G++P++VTYN LL+ G+ A
Sbjct: 209 PSILTYNTVINA-CARGGLDW-EGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266
Query: 54 SL------------------HPNERFEKTIRNAEKVFD---EMRVRGIEPDVTSFSIVLH 92
+ H E F K +R EKV D EM G PD+TS++++L
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLVETFGK-LRRLEKVCDLLGEMASGGSLPDITSYNVLLE 325
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
Y+++ + ++ + M+ G P TY+ ++ GR +D +L EM + P
Sbjct: 326 AYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDP 385
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
A TYN + + + L+ M E+++ P++ TY +I + R+I
Sbjct: 386 DAATYNILIEVFGEGGYFKEVVTLFHDMVEENI-EPDMETYEGIIFACGKGGLHEDARKI 444
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++ +++ +YT +I + ++EA F M E G P TF +L +
Sbjct: 445 LQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFAR 504
Query: 273 SDMLRTWRRLKKKLDEESITFGSEFQNYHFKPYRR 307
+++ + +L + I + N + Y++
Sbjct: 505 GGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQ 539
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 6/216 (2%)
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+VFDEM +G+ V S++ +++ Y R + + SL+ L+ MK + I P++ TY +V+
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA- 220
Query: 130 CSCGRIEDAEELLG---EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C+ G + D E LLG EM G+ P TYN R + A ++R M D
Sbjct: 221 CARGGL-DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN-DGGI 278
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VP++ TY+ L+ F L R++ V ++ + D+ SY +L+ + KEA
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
F +M G P T+ L QS R+L
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 128/294 (43%), Gaps = 32/294 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---- 56
+P++ Y+ L+ + K+ R++ LGEM G P++ +YNVLL + S+
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 57 -----------PNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
PN + N ++F EM+ +PD +++I++ V+
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + M E+ I P + TY ++ G EDA ++L M N + PS++
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSK 458
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE---I 212
Y + + A+ + M E P+I T++ L+ F R +V+E I
Sbjct: 459 AYTGVIEAFGQAALYEEALVAFNTMHEVG-SNPSIETFHSLLYSFA---RGGLVKESEAI 514
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + S + + D++ I + K++EA + +V+M + P + T E +
Sbjct: 515 LSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAV 568
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 129/301 (42%), Gaps = 16/301 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI + + +M+E +EP++ TY ++ C + LH + R
Sbjct: 385 PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF-ACGKGGLHEDAR- 442
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K+ M I P +++ V+ + +A + +L N M E G P++ T
Sbjct: 443 --------KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++ G ++++E +L +V +G+ + +T+N + Y+ A+K Y M
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDM- 553
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P+ T ++ ++ +D RE + +K S++ + Y M++ + ++W
Sbjct: 554 EKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERW 613
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK---KKLDEESITFGSEFQ 298
+ + EM+ + + +G D W+ ++ KL+ E G F
Sbjct: 614 DDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDD--SNWQIVEYVLDKLNSEGCGLGIRFY 671
Query: 299 N 299
N
Sbjct: 672 N 672
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
+P+ ++I++ + R L+ + M +G+ +V +YT+++ GR E + E
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 141 LLGEMVRNGVSPSAETYNCFFKE-YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
LL M +SPS TYN RG D G + L+ +M+ + + P+I TYN L+
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI-QPDIVTYNTLLSA 256
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
D ++ + + DL +Y+ L+ + ++ ++ C EM G LP
Sbjct: 257 CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 260 KVTFETLYRGLIQSDMLR 277
++ L +S ++
Sbjct: 317 ITSYNVLLEAYAKSGSIK 334
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%)
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
S + FKE+ GR D +++L++ M+ C PN H Y I+I + +D E+
Sbjct: 104 SLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEV 163
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ + + + SYT LI+ +++ + + M + + P +T+ T+
Sbjct: 164 FDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTV 217
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 136/268 (50%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+LI G+ K I+ A R EMI RG++ NVVTYN ++ G+ + +
Sbjct: 344 PNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEM------ 397
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F+EM + GIEPD ++++++ Y ++H + + L MK + + P+ T
Sbjct: 398 ----AKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT 453
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ LC ++ A E+L +M+RNGV P+ Y K Y A++L + M
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + +P++ YN LI +++ + + + + + +Y I+ + +
Sbjct: 514 ANGV-LPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ A +YF +M+ G++P V + L +G
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKG 600
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 137/284 (48%), Gaps = 16/284 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y + I + K I +AER+ +M+ G+ PN V Y +L+ G C +
Sbjct: 554 PNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN------- 606
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK-LNFMKEKGICPTVA 120
T+ A F M +G+ PD+ ++S ++H S+ K + ++ L F+K G+ P V
Sbjct: 607 --TVE-ALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLK-TGVVPDVF 662
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN--GAMKLYR 178
Y S++ C G IE A +L EM+ NG++P+ YN +Y K N A KL+
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFD 722
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M + P+ + Y ILI ++ +++ + +G L ++ LI C+
Sbjct: 723 EMISKGIS-PDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKH 780
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
K EA + F +M++K L P VT+ L +++M+ +L
Sbjct: 781 GKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQL 824
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 148/302 (49%), Gaps = 16/302 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLN--GVCRRASLHPN 58
+P+V +Y SLI G+CK I+ A + EM+ G+ PN+V YN L+N G C+ +L
Sbjct: 658 VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNL--- 714
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
A K+FDEM +GI PD + I++ + + +L + ++K + +
Sbjct: 715 -------TEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GS 766
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
++ + S++ C G++ +A EL +MV ++P+ TY Y + A +L+
Sbjct: 767 LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFL 826
Query: 179 QMKEDDLCVPNIHTYNILIGMFMAL-NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
M+ ++ +PN TY L+ + + NR M+ ++ ++ + D +Y ++ C+
Sbjct: 827 DMETRNI-IPNTLTYTSLLLSYNQIGNRFKMI-SLFKDMEARGIACDAIAYGVMASAYCK 884
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
+ K EA + + + +G+ + F+ L L + + T L ++ +E ++ S+
Sbjct: 885 EGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKT 944
Query: 298 QN 299
N
Sbjct: 945 CN 946
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 136/300 (45%), Gaps = 13/300 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV MY +LI + + +R +MA L MI GV P++ YN L+ G+CR
Sbjct: 484 PNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCR---------- 533
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A+ + +M +GI+P+ ++ +++YS++ + Q++ M GI P
Sbjct: 534 AKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVI 593
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++K C G +A M+ G+ P Y+ AM ++ +
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI--HGLCEKQ 239
+ + VP++ YN LI F ++ ++++ + + + ++ Y LI +G C+
Sbjct: 654 KTGV-VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSG 712
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
EA + F EMI KG+ P + L G + L L + ++S+ S F +
Sbjct: 713 NLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNS 772
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 129/272 (47%), Gaps = 12/272 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT++I CK+ + + L EM E+ +PN+ TYN + G+C+ +
Sbjct: 239 VPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGA------ 291
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A +V M +G+ PD ++++++ + + + + + M G+ P
Sbjct: 292 ----VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ G IE+A + EM+ G+ + TYN + AM L+ +M
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P+ TYN+LI ++ + M E+ +K +L +Y++LI GLC
Sbjct: 408 LMAGI-EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++A + +MI G+ P + TL + +Q
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQ 498
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 141/307 (45%), Gaps = 17/307 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y + I G C+ +D A M+E+G+ P+ TY +L++G C+
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCK---------- 323
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K + A+ +F+ M G+ P+ +++ ++ + + + +L + M +G+ V T
Sbjct: 324 QKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVT 383
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ + G + A L EM+ G+ P TYN Y D A +L +MK
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMK 443
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+ TY++LI + + E+ + + + + ++ Y LI ++ ++
Sbjct: 444 ARKL-TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRY 502
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI-----TFGSE 296
+ A + MI G+LP + L GL ++ + + L + E+ I T+G+
Sbjct: 503 EMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA- 561
Query: 297 FQNYHFK 303
F N + K
Sbjct: 562 FINLYSK 568
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 119/276 (43%), Gaps = 12/276 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + +L+ K N + + + G M+E + P+V TY ++ C+
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGD------- 257
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + V EM + +P++ +++ + + +L+ M EKG+ P T
Sbjct: 258 ---VIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHT 313
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +V C R ++A+ + M +G++P+ TY + + A+++ +M
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI 373
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L + N+ TYN +IG M ++N + + + D +Y +LI G +
Sbjct: 374 TRGLKL-NVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDM 432
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+AC+ EM + L P T+ L GL S L+
Sbjct: 433 AKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 8/184 (4%)
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA- 170
+G PT+ ++++ L + ++ G MV + P TY K + D
Sbjct: 200 SEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVI 259
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
G M L KE C PN+ TYN IG +D E+ + LG D +YT+
Sbjct: 260 KGKMVLSEMEKE---CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTL 316
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
L+ G C++++ KEA F M GL P + T+ L G I+ + R+K +E
Sbjct: 317 LVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIK----DEM 372
Query: 291 ITFG 294
IT G
Sbjct: 373 ITRG 376
>gi|242041823|ref|XP_002468306.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
gi|241922160|gb|EER95304.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
Length = 519
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 14/261 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + L+ GW + AE F+ EM E GVEP++VTYN L++ C+
Sbjct: 215 NRHTFNILLSGW---KSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCK----------N 261
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ + A K+ DEMR + I PD+ +++ ++ +P + D L M E G P V Y
Sbjct: 262 RDVEKAYKLLDEMREKDISPDIITYTSLIGGLGLIGQPDKARDLLKEMHELGCSPDVPAY 321
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ ++ R+ DA L+ +M G+ P+ TYN FF+ Y D +LY +M+
Sbjct: 322 NAAIRNFVIAKRLGDAFALMDQMASKGLMPNPTTYNLFFRCYYWAFDIGSTWRLYERMRS 381
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ C PN + +I + ++ E+W+ + + G +L LC++ K +
Sbjct: 382 EG-CFPNTQSCMFIIRLCHRYGKVGQALELWSDMVSNRFGSFTLVSDVLFDLLCDEGKLE 440
Query: 243 EACQYFVEMIEKGLLPQKVTF 263
E + F +M+E G P V F
Sbjct: 441 EVERCFCQMVEFGQKPSNVAF 461
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
EDAE + EM GV P TYN + +D A KL +M+E D+ P+I TY
Sbjct: 230 EDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRDVEKAYKLLDEMREKDIS-PDIITYTS 288
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
LIG + + D R++ + D+ +Y I ++ +A +M KG
Sbjct: 289 LIGGLGLIGQPDKARDLLKEMHELGCSPDVPAYNAAIRNFVIAKRLGDAFALMDQMASKG 348
Query: 256 LLPQKVTFETLYRGLIQS-DMLRTWR 280
L+P T+ +R + D+ TWR
Sbjct: 349 LMPNPTTYNLFFRCYYWAFDIGSTWR 374
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 136/302 (45%), Gaps = 18/302 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y LI WC+ + A EM RG+ NVV+YN L+ G+CR L
Sbjct: 106 PNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLW----- 160
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+ D MR G P + +F++++ Y +A K +L N MK G P+ T
Sbjct: 161 -----DAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVT 215
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C + A L +M G+ P+ TY + A ++ M+
Sbjct: 216 YNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGME 275
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEKQ 239
+ L V + HTY +L+ M R+++ + E G++ + Y M+I+G +
Sbjct: 276 KAGLEV-DAHTYGVLVRALCMEGNMKDARKLFQSM--GEKGVEPSNVIYDMMIYGYGREG 332
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI-TFGSEFQ 298
+A + +EM +KGL+P ++ R L + D + L D E+I +F Q
Sbjct: 333 SSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLD--DMETIRSFAGHHQ 390
Query: 299 NY 300
N+
Sbjct: 391 NF 392
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 127/268 (47%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+L++G+ + + EM GVEPN+ TYN L+ CR F
Sbjct: 71 PNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTG------EF 124
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A +FDEM VRGI +V S++ ++ R K + L+ M+ +G P++ T
Sbjct: 125 ER----ARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIIT 180
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V G++ +A +M G PSA TYN + +D A + MK
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L P TY ILI F N M EI ++ + L +D +Y +L+ LC +
Sbjct: 241 ERGL-EPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNM 299
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
K+A + F M EKG+ P V ++ + G
Sbjct: 300 KDARKLFQSMGEKGVEPSNVIYDMMIYG 327
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 11/289 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V T+L+ G CK + A R EM G+ PN VTY L++G + + E
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHG------YFTHGQRE 90
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K +F+EMR G+EP++ +++ ++ + R + + + + M +GI V +Y
Sbjct: 91 KGF----ALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSY 146
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC G++ DA +LL M G PS T+N Y + A+ + QMK
Sbjct: 147 NTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKA 206
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P+ TYN+LI F M + +K L +YT+LI +
Sbjct: 207 AGF-QPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMG 265
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+A + M + GL T+ L R L ++ R+L + + E+ +
Sbjct: 266 KAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGV 314
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 38/211 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+ Y LI G+C+ + A R L +M ERG+EP VTY +L++ R
Sbjct: 211 PSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEI 270
Query: 52 -----RASLHPNER----------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+A L + E +++A K+F M +G+EP + ++++ Y R
Sbjct: 271 LAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGR 330
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L + M++KG+ P A+Y ++ LC + ++AE LL +M ET
Sbjct: 331 EGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM---------ET 381
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
+ + G A K Q K++D C
Sbjct: 382 ----IRSFAGHHQNFIASKSDSQQKDEDKCT 408
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 147/288 (51%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V Y SL+ G CK + + L +M+ R + PNV+T+NVLL+ +
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK---------- 310
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ A +++ EM RGI P++ +++ ++ Y ++ + + L+ M P + T
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+TS++K C R++D ++ + + G+ +A TY+ + + A +L+++M
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +P++ TY IL+ +++ EI+ ++ S++ L + YT +I G+C+ K
Sbjct: 431 SHGV-LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++A F + KG+ P +T+ + GL + L L +K++E+
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 15/293 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +LI G ++ A + M+E G +P+VVTYN ++NG+CR
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL---- 211
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +M R ++ DV ++S ++ R ++ M+ KGI +V T
Sbjct: 212 ------ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+V+ LC G+ D LL +MV + P+ T+N + A +LY++M
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PNI TYN L+ + NR+ + + + ++ D+ ++T LI G C ++
Sbjct: 326 TRGIS-PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
+ + F + ++GL+ VT+ L +G QS + +L ++L +E ++ G
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI----KLAEELFQEMVSHG 433
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 144/296 (48%), Gaps = 17/296 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y S++ G C+ +A L +M ER V+ +V TY+ +++ +CR
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR---------- 240
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I A +F EM +GI+ V +++ ++ +A K L M + I P V T
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGR-KDANGAMKLYR 178
+ ++ G++++A EL EM+ G+SP+ TYN Y + R +AN + L
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ K C P+I T+ LI + + R+D +++ ++ L + +Y++L+ G C+
Sbjct: 361 RNK----CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
K K A + F EM+ G+LP +T+ L GL + L + + L + + G
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 141/303 (46%), Gaps = 16/303 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ +I +C+ + A LG++++ G EP+ T+N L+ G+ E
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL----------FLE 171
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A + D M G +PDV +++ +++ R+ L+LD L M+E+ + V TY
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++++ LC G I+ A L EM G+ S TYN + N L + M
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
++ VPN+ T+N+L+ +F+ ++ E++ + + ++ +Y L+ G C + +
Sbjct: 292 REI-VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK-LDEESITFGSEF 297
EA M+ P VTF +L +G D ++ +R + K+ L ++T+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 298 QNY 300
Q +
Sbjct: 411 QGF 413
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 11/234 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +TSLI G+C + R+D + + +RG+ N VTY++L+ G C+
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK------- 418
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I+ AE++F EM G+ PDV ++ I+L K + +L+ +++ + +
Sbjct: 419 ---IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++++ +C G++EDA L + GV P+ TY + + A L R+M+
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
ED PN TYN LI + + ++ +K D S M+I L
Sbjct: 536 EDG-NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 120/272 (44%), Gaps = 11/272 (4%)
Query: 21 DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80
D A EMI P++V ++ + + R + F K ++ + GI
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK----------QLELNGI 119
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
++ + +I+++ + R K + L + + G P T+ +++K L G++ +A
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
L+ MV NG P TYN D + A+ L R+M+E ++ ++ TY+ +I
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV-KADVFTYSTIIDSL 238
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+D ++ ++ + + +Y L+ GLC+ KW + +M+ + ++P
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+TF L ++ L+ L K++ I+
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 137/287 (47%), Gaps = 14/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I+G+ I+ A R L M +G+EP+ TY L++G+C+
Sbjct: 206 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK---------- 255
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A +FD+M G+ P+ +++ ++ Y + + + M +KGI P+V+T
Sbjct: 256 EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST 315
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V L GR+ +A++++ EM + G+ P A TYN Y +A A L+ +M
Sbjct: 316 YNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEML 375
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P TY LI + NRM +++ + + D+ + +I G C
Sbjct: 376 SKGI-EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNV 434
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ A EM K + P +VTF TL +G + + R L LDE
Sbjct: 435 ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARML---LDE 478
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 26/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-----H 56
P+ Y SLI G CK R++ A +M+E G+ PN VTYN L++G C + L +
Sbjct: 241 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 300
Query: 57 PNERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+E +K I A+ + EMR +GI PD +++I+++ YSR
Sbjct: 301 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 360
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D N M KGI PT TYTS++ L R+++A++L +++ GVSP
Sbjct: 361 CGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 420
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N + + A L ++M + P+ T+N L+ +++ R + + +
Sbjct: 421 FNAMIDGHCANGNVERAFMLLKEMDRKSV-PPDEVTFNTLMQGRCREGKVEEARMLLDEM 479
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K + D SY LI G + K+A EM+ G P +T+ L + L ++
Sbjct: 480 KXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEG 539
Query: 277 RTWRRLKKKLDEESIT 292
L K++ + I+
Sbjct: 540 DLAEELLKEMVNKGIS 555
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 130/273 (47%), Gaps = 11/273 (4%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
++ A F+G M G +PNVV+YN +++G R + I A ++ D MRV+
Sbjct: 188 KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN----------IEGARRILDAMRVK 237
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GIEPD ++ ++ + + + + + M E G+ P TY +++ C+ G +E A
Sbjct: 238 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 297
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
EMV+ G+ PS TYN A + ++M++ + +P+ TYNILI
Sbjct: 298 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI-IPDAITYNILIN 356
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
+ ++ N + + +YT LI+ L + + KEA F +++++G+ P
Sbjct: 357 GYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSP 416
Query: 259 QKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ F + G + + L K++D +S+
Sbjct: 417 DVIMFNAMIDGHCANGNVERAFMLLKEMDRKSV 449
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V M+ ++I G C ++ A L EM + V P+ VT+N L+ G CR
Sbjct: 416 PDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR---------- 465
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A + DEM+ RGI+PD S++ ++ Y R + + + M G PT+ T
Sbjct: 466 EGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLT 525
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
Y +++KCLC + AEELL EMV G+SP TY
Sbjct: 526 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 561
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E ++ A + M G +P+V S++ ++H YS + + L+ M+ KGI P
Sbjct: 185 LEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 244
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S++ +C GR+E+A L +MV G+ P+A TYN Y + D A +M
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + +P++ TYN+L+ RM ++ ++ + D +Y +LI+G
Sbjct: 305 VKKGI-MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 363
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
K A EM+ KG+ P VT+ +L L + + ++ L +K+ ++ ++
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVS 415
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P YTSLIY + NR+ A+ +++++GV P+V+ +N +++G C +
Sbjct: 381 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGN------- 433
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + EM + + PD +F+ ++ R K + + L+ MK +GI P +
Sbjct: 434 ---VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHIS 490
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ G I+DA + EM+ G +P+ TYN K ++ + A +L ++M
Sbjct: 491 YNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV 550
Query: 182 EDDLCVPNIHTYNILI 197
+ P+ TY LI
Sbjct: 551 NKGIS-PDDSTYLSLI 565
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 10/128 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +L+ G C+ +++ A L EM RG++P+ ++YN L++G RR
Sbjct: 451 PDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGD------- 503
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I++A V DEM G P + +++ ++ + + L+ + L M KGI P +T
Sbjct: 504 ---IKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDST 560
Query: 122 YTSVVKCL 129
Y S+++ +
Sbjct: 561 YLSLIEGM 568
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 147/288 (51%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V Y SL+ G CK + + L +M+ R + PNV+T+NVLL+ +
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK---------- 310
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ A +++ EM RGI P++ +++ ++ Y ++ + + L+ M P + T
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+TS++K C R++D ++ + + G+ +A TY+ + + A +L+++M
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +P++ TY IL+ +++ EI+ ++ S++ L + YT +I G+C+ K
Sbjct: 431 SHGV-LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++A F + KG+ P +T+ + GL + L L +K++E+
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 15/293 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +LI G ++ A + M+E G +P+VVTYN ++NG+CR
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL---- 211
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +M R ++ DV ++S ++ R ++ M+ KGI +V T
Sbjct: 212 ------ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+V+ LC G+ D LL +MV + P+ T+N + A +LY++M
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PNI TYN L+ + NR+ + + + ++ D+ ++T LI G C ++
Sbjct: 326 TRGIS-PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
+ + F + ++GL+ VT+ L +G QS + +L ++L +E ++ G
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI----KLAEELFQEMVSHG 433
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 144/296 (48%), Gaps = 17/296 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y S++ G C+ +A L +M ER V+ +V TY+ +++ +CR
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR---------- 240
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I A +F EM +GI+ V +++ ++ +A K L M + I P V T
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGR-KDANGAMKLYR 178
+ ++ G++++A EL EM+ G+SP+ TYN Y + R +AN + L
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ K C P+I T+ LI + + R+D +++ ++ L + +Y++L+ G C+
Sbjct: 361 RNK----CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
K K A + F EM+ G+LP +T+ L GL + L + + L + + G
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 141/303 (46%), Gaps = 16/303 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ +I +C+ + A LG++++ G EP+ T+N L+ G+ E
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL----------FLE 171
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A + D M G +PDV +++ +++ R+ L+LD L M+E+ + V TY
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++++ LC G I+ A L EM G+ S TYN + N L + M
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
++ VPN+ T+N+L+ +F+ ++ E++ + + ++ +Y L+ G C + +
Sbjct: 292 REI-VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK-LDEESITFGSEF 297
EA M+ P VTF +L +G D ++ +R + K+ L ++T+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 298 QNY 300
Q +
Sbjct: 411 QGF 413
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 11/239 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +TSLI G+C + R+D + + +RG+ N VTY++L+ G C+
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK------- 418
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I+ AE++F EM G+ PDV ++ I+L K + +L+ +++ + +
Sbjct: 419 ---IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++++ +C G++EDA L + GV P+ TY + + A L R+M+
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
ED PN TYN LI + + ++ +K D S M+I L K
Sbjct: 536 EDG-NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 120/272 (44%), Gaps = 11/272 (4%)
Query: 21 DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80
D A EMI P++V ++ + + R + F K ++ + GI
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK----------QLELNGI 119
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
++ + +I+++ + R K + L + + G P T+ +++K L G++ +A
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
L+ MV NG P TYN D + A+ L R+M+E ++ ++ TY+ +I
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV-KADVFTYSTIIDSL 238
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+D ++ ++ + + +Y L+ GLC+ KW + +M+ + ++P
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+TF L ++ L+ L K++ I+
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 136/302 (45%), Gaps = 18/302 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y LI WC+ + A EM RG+ NVV+YN L+ G+CR L
Sbjct: 106 PNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLW----- 160
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+ D MR G P + +F++++ Y +A K +L N MK G P+ T
Sbjct: 161 -----DAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVT 215
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C + A L +M G+ P+ TY + A ++ M+
Sbjct: 216 YNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGME 275
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEKQ 239
+ L V + HTY +L+ M R+++ + E G++ + Y M+I+G +
Sbjct: 276 KAGLEV-DAHTYGVLVRALCMEGNMKDARKLFQSM--GEKGVEPSNVIYDMMIYGYGREG 332
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI-TFGSEFQ 298
+A + +EM +KGL+P ++ R L + D + L D E+I +F Q
Sbjct: 333 SSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLD--DMETIRSFAGHHQ 390
Query: 299 NY 300
N+
Sbjct: 391 NF 392
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 127/268 (47%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+L++G+ + + EM GVEPN+ TYN L+ CR F
Sbjct: 71 PNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTG------EF 124
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A +FDEM VRGI +V S++ ++ R K + L+ M+ +G P++ T
Sbjct: 125 ER----ARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIIT 180
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V G++ +A +M G PSA TYN + +D A + MK
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L P TY ILI F N M EI ++ + L +D +Y +L+ LC +
Sbjct: 241 ERGL-EPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNM 299
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
K+A + F M EKG+ P V ++ + G
Sbjct: 300 KDARKLFQSMGEKGVEPSNVIYDMMIYG 327
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 11/289 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V T+L+ G CK + A R EM G+ PN VTY L++G + + E
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHG------YFTHGQRE 90
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K +F+EMR G+EP++ +++ ++ + R + + + + M +GI V +Y
Sbjct: 91 KGF----ALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSY 146
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC G++ DA +LL M G PS T+N Y + A+ + QMK
Sbjct: 147 NTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKA 206
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P+ TYN+LI F M + +K L +YT+LI +
Sbjct: 207 AGF-QPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMG 265
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+A + M + GL T+ L R L ++ R+L + + E+ +
Sbjct: 266 KAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGV 314
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 147/287 (51%), Gaps = 11/287 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y SL+ G CK + + L +M+ R + PNV+T+NVLL+ + E
Sbjct: 252 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK----------E 301
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++ A +++ EM RGI P++ +++ ++ Y ++ + + L+ M P + T+
Sbjct: 302 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 361
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
TS++K C R++D ++ + + G+ +A TY+ + + A +L+++M
Sbjct: 362 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 421
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ +P++ TY IL+ +++ EI+ ++ S++ L + YT +I G+C+ K +
Sbjct: 422 HGV-LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 480
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
+A F + KG+ P +T+ + GL + L L +K++E+
Sbjct: 481 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 527
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 15/293 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +LI G ++ A + M+E G +P+VVTYN ++NG+CR
Sbjct: 146 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL---- 201
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +M R ++ DV ++S ++ R ++ M+ KGI +V T
Sbjct: 202 ------ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 255
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+V+ LC G+ D LL +MV + P+ T+N + A +LY++M
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 315
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PNI TYN L+ + NR+ + + + ++ D+ ++T LI G C ++
Sbjct: 316 TRGIS-PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 374
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
+ + F + ++GL+ VT+ L +G QS + +L ++L +E ++ G
Sbjct: 375 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI----KLAEELFQEMVSHG 423
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 144/296 (48%), Gaps = 17/296 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y S++ G C+ +A L +M ER V+ +V TY+ +++ +CR
Sbjct: 181 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR---------- 230
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I A +F EM +GI+ V +++ ++ +A K L M + I P V T
Sbjct: 231 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 290
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGR-KDANGAMKLYR 178
+ ++ G++++A EL EM+ G+SP+ TYN Y + R +AN + L
Sbjct: 291 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 350
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ K C P+I T+ LI + + R+D +++ ++ L + +Y++L+ G C+
Sbjct: 351 RNK----CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 406
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
K K A + F EM+ G+LP +T+ L GL + L + + L + + G
Sbjct: 407 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 462
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 141/303 (46%), Gaps = 16/303 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ +I +C+ + A LG++++ G EP+ T+N L+ G+ E
Sbjct: 112 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLF----------LE 161
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A + D M G +PDV +++ +++ R+ L+LD L M+E+ + V TY
Sbjct: 162 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 221
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++++ LC G I+ A L EM G+ S TYN + N L + M
Sbjct: 222 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 281
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
++ VPN+ T+N+L+ +F+ ++ E++ + + ++ +Y L+ G C + +
Sbjct: 282 REI-VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 340
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK-LDEESITFGSEF 297
EA M+ P VTF +L +G D ++ +R + K+ L ++T+
Sbjct: 341 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 400
Query: 298 QNY 300
Q +
Sbjct: 401 QGF 403
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 17/285 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV + L+ + K ++ A EMI RG+ PN++TYN L++G C
Sbjct: 285 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC---------- 334
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A + D M PD+ +F+ ++ Y + + + ++G+
Sbjct: 335 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 394
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+ +V+ C G+I+ AEEL EMV +GV P TY A++++ +
Sbjct: 395 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 454
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN---HVKGSELGLDLDSYTMLIHGLCE 237
++ + + + I+ GM + V + WN + + ++ +YT++I GLC+
Sbjct: 455 QKSKMDLGIVMYTTIIEGMC----KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 510
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
K EA +M E G P T+ TL R ++ L +L
Sbjct: 511 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 555
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 11/239 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +TSLI G+C + R+D + + +RG+ N VTY++L+ G C+
Sbjct: 356 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK------- 408
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I+ AE++F EM G+ PDV ++ I+L K + +L+ +++ + +
Sbjct: 409 ---IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 465
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++++ +C G++EDA L + GV P+ TY + + A L R+M+
Sbjct: 466 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 525
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
ED PN TYN LI + + ++ +K D S M+I L K
Sbjct: 526 EDG-NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 583
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 120/272 (44%), Gaps = 11/272 (4%)
Query: 21 DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80
D A EMI P++V ++ + + R + F K ++ + GI
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK----------QLELNGI 109
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
++ + +I+++ + R K + L + + G P T+ +++K L G++ +A
Sbjct: 110 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 169
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
L+ MV NG P TYN D + A+ L R+M+E ++ ++ TY+ +I
Sbjct: 170 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV-KADVFTYSTIIDSL 228
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+D ++ ++ + + +Y L+ GLC+ KW + +M+ + ++P
Sbjct: 229 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 288
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+TF L ++ L+ L K++ I+
Sbjct: 289 ITFNVLLDVFVKEGKLQEANELYKEMITRGIS 320
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 10/57 (17%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
AE EMI+RG+ PN +TY+ L++G C+ E + A ++ D M +G
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCK----------ENRLDEANQMLDLMVTKG 764
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 146/308 (47%), Gaps = 46/308 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V ++SLIYG+C + + A R EM+ + + P+ T+N+L++ +C+
Sbjct: 226 PTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCK---------- 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVL-------------HVYSRAHKPQLSLD--- 105
E I+ A+ V M G+EP V +++ ++ HV S + +++ +
Sbjct: 276 EGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRS 335
Query: 106 ---------KLNFMKE----------KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
K+ + E +GI P TY S++ LC GRI A EL+ EM
Sbjct: 336 YNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMH 395
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
N + TYN + + + A+ L +++KE + PN+ TYNILI ++
Sbjct: 396 NNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGI-QPNMCTYNILIDGLCKGGQL 454
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++++ + ++ +Y ++I+GLC++ + EA +M + G++P VT+ET+
Sbjct: 455 KNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETI 514
Query: 267 YRGLIQSD 274
+ L D
Sbjct: 515 IQALFHKD 522
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 137/284 (48%), Gaps = 11/284 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV MY+++I G CK + A EMI + + P VVT++ L+ G C
Sbjct: 192 NVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKF------- 244
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++A ++F+EM ++ I PD +F+I++ + K + + + + M ++G+ PTV TY
Sbjct: 245 ---KDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTY 301
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C + A+ +L + R V+P++ +YN + K + A+ L+ +M
Sbjct: 302 NTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCC 361
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ P+ TYN LI R+ E+ + + + + D+ +Y LI C+ Q
Sbjct: 362 RGIA-PHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVD 420
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A ++ E G+ P T+ L GL + L+ + + + L
Sbjct: 421 KAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDL 464
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 133/288 (46%), Gaps = 17/288 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI G CK+ + A + L ++ + V NVV Y+ +++G+C+ +K +
Sbjct: 161 YGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCK----------DKLVT 210
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A ++ EM V+ I P V +FS +++ + K + + N M K I P T+ +V
Sbjct: 211 DAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILV 270
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY---RGRKDANGAMKLYRQMKED 183
LC G+I++A+ ++ M++ GV P+ TYN Y A + + +M+
Sbjct: 271 DALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMR-- 328
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
PN +YNI+I F + +D +++ + + +Y LI GLC+ +
Sbjct: 329 --VAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPY 386
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + EM + VT+ +L ++ + L KK+ E I
Sbjct: 387 AWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGI 434
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 46/256 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + Y +I G+CKI +D A EM RG+ P+ VTYN L++G+C+
Sbjct: 331 PNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGR------- 383
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A ++ DEM I D+ +++ ++ V+ + ++ + +KE GI P + T
Sbjct: 384 ---IPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCT 440
Query: 122 YTSVVKCLCSCGRIEDAEE-----------------------------------LLGEMV 146
Y ++ LC G++++A++ LL +M
Sbjct: 441 YNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKME 500
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
NG+ P A TY + + + A KL R+M + V L+G + L M
Sbjct: 501 DNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTLVGRTLNLG-M 559
Query: 207 DMVREIWNHVKGSELG 222
+++ +++ ++ G
Sbjct: 560 NLISLLFSALECFSFG 575
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 61/298 (20%)
Query: 29 EMIERGVEPNVVTYNVLLN---------------------GVCRRASLHPNERFEKTI-- 65
+M +GV+P++ T ++L+N G+C ++ F +
Sbjct: 92 QMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLA 151
Query: 66 -----------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQL 102
R A +V ++ + + +V +S ++ K +L
Sbjct: 152 LGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLC---KDKL 208
Query: 103 SLDKLNFMKE---KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC 159
D E K I PTV T++S++ C G+ +DA L EMV ++P A T+N
Sbjct: 209 VTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNI 268
Query: 160 FF----KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
KE + ++ N + ++ E P + TYN L+ + +N + + + +
Sbjct: 269 LVDALCKEGKIKEAKNVIAVMMKEGVE-----PTVVTYNTLMDGYCLVNEVGKAKHVLSI 323
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + + SY ++I+G C+ + EA F EM +G+ P KVT+ +L GL ++
Sbjct: 324 ISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKA 381
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 93/209 (44%), Gaps = 18/209 (8%)
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLH--VYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ NA F+ MR P + F+ +L + ++ H P + L M+ KG+ P + T
Sbjct: 46 VVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTV-LSLSTQMESKGVKPDLFT 104
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C C G++ A + ++++ G+ + + N A+ + +
Sbjct: 105 LSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKV--------------NEALLFHDHVL 150
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ TY ILI + + ++ ++G + ++ Y+ +I GLC+ +
Sbjct: 151 ALGFHLNHV-TYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLV 209
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+A + EMI K + P VTF +L G
Sbjct: 210 TDAYGLYSEMIVKRIPPTVVTFSSLIYGF 238
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 142/296 (47%), Gaps = 16/296 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +L+ G CKI A +FL + + NVV YN +++G+C+ +K +
Sbjct: 160 YGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCK----------DKLVN 209
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + EM RGI P+V +++ ++ + A + + LN M K I P V TY ++
Sbjct: 210 EAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILI 269
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G++++A+ LL EM G TY + ++ + A L+ +MKE +
Sbjct: 270 DALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGI- 328
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN +TY LI R+ ++++ + +D+ +Y ++I GLC++ EA
Sbjct: 329 QPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALA 388
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG-SEFQNYH 301
+M + G +P VTFE + R L + D +KL E I G F+N+H
Sbjct: 389 IKSKMEDNGCIPNVVTFEIIIRSLFKKD----ENDKAEKLLHEMIAKGLLRFRNFH 440
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+LI G+C ++ A L EMI + + PNV TY +L++ +C+
Sbjct: 225 PNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCK---------- 274
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ A+ + EM RG DV +++ +L + + + MKE GI P T
Sbjct: 275 EGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYT 334
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC GR++DA++L +++ G TYN + A+ + +M
Sbjct: 335 YTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKM- 393
Query: 182 EDDLCVPNIHTYNILI 197
ED+ C+PN+ T+ I+I
Sbjct: 394 EDNGCIPNVVTFEIII 409
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 134/290 (46%), Gaps = 21/290 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ LI +C + ++ + LG++++ G +PN +T L+ G+C + + + F
Sbjct: 85 PNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHF 144
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
D++ +G + + S+ +L+ + + + ++ L +++ V
Sbjct: 145 H----------DKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVM 194
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC + +A + EM G+ P+ TY + GA L +M
Sbjct: 195 YNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMI 254
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWN-----HVKGSELGLDLDSYTMLIHGLC 236
++ PN++TY ILI AL + V+E N H +G D+ +YT L+ G C
Sbjct: 255 LKNI-NPNVYTYAILID---ALCKEGKVKEAKNLLAEMHYRGQP--ADVVTYTSLLDGFC 308
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ Q +A F++M E G+ P K T+ L GL + L+ ++L + L
Sbjct: 309 KNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDL 358
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 102/252 (40%), Gaps = 34/252 (13%)
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
+M V+GIEP++ + +I+++ + + S L + + G P T T+++K LC G
Sbjct: 77 QMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKG 136
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE----------- 182
++ + ++V G + +Y + A+K R +++
Sbjct: 137 EVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYN 196
Query: 183 ---DDLC--------------------VPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
D LC PN+ TY LIG F ++ + N +
Sbjct: 197 TIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILK 256
Query: 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 279
+ ++ +Y +LI LC++ K KEA EM +G VT+ +L G ++ L
Sbjct: 257 NINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKA 316
Query: 280 RRLKKKLDEESI 291
L K+ E I
Sbjct: 317 TALFMKMKEWGI 328
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 93/215 (43%), Gaps = 1/215 (0%)
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + +A F+ M + P + F +L ++ ++ M+ KGI P + T
Sbjct: 30 DNVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVT 89
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ C C G++ + +LG++++ G P+ T K + + ++ + ++
Sbjct: 90 LNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVV 149
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + +Y L+ + + ++ S GL++ Y +I GLC+ +
Sbjct: 150 AQGFQMNQV-SYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLV 208
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
EA ++ EM +G+ P +T+ TL G + L
Sbjct: 209 NEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQL 243
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 143/297 (48%), Gaps = 41/297 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+ L G CK RID A + EM G PN+VTYN L++G+C+ + +
Sbjct: 112 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKAS------K 165
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK A ++ + + G PDV +++I++ + + +L + M ++G P+V
Sbjct: 166 TEK----AYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVI 221
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY----NCFFKEYRGRKDA------ 170
TYT++++ LC GR+++A + EMV + A Y N + K R ++
Sbjct: 222 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI 281
Query: 171 ---------NGAMKLY-RQMKEDDL-----------CVPNIHTYNILIGMFMALNRMDMV 209
N M Y ++ + D++ CVPNI TYNI++ ++D
Sbjct: 282 RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA 341
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + D+ SY ++I GL + K KEA Q +MI+ G+ P VT+ TL
Sbjct: 342 FPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 398
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 13/285 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + +Y +L+ G+CK R+D +M RG PN+ TYN++++G+C+ + +E F
Sbjct: 285 PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKV--DEAF 342
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ M G PDV S++I++ +A KP+ + L+ M + GI P T
Sbjct: 343 --------PFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVT 394
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R +DA +L M++ GV P TYN A +L +M
Sbjct: 395 YNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 454
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ V TYN +I + + +H+ G + + +Y + I LC++ +
Sbjct: 455 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRL 514
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EA EM L +V++ T+ GL +++ L +L +++
Sbjct: 515 DEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREM 556
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 133/271 (49%), Gaps = 14/271 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +LI G CK +D A+ + E + G P+VVTY++L +G+C+R + +E F
Sbjct: 78 PSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRI--DEAF 135
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + EM G P++ +++ ++ +A K + + + L + G P V T
Sbjct: 136 E--------LVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +V LC GR++ A +++ M++ G +PS TY + + A ++++M
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C + Y L+ + +R +++ + ++G+ +D Y L+ G C++ +
Sbjct: 248 SKD-CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALMDGYCKEGRL 303
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
E F +M +G +P T+ + GL +
Sbjct: 304 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCK 334
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 127/281 (45%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI G CK ++ D A L EM++RGV P+ VT+N +++G+C+ +F
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAG------KF 61
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A + M R P +++ ++ + + ++ G P V T
Sbjct: 62 ER----AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVT 117
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ + LC GRI++A EL+ EM NG +P+ TYN A +L +
Sbjct: 118 YSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLV 177
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
VP++ TY I++ R+D ++ + + +YT L+ GLC +
Sbjct: 178 SSGF-VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRV 236
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
EA F EM+ K + + +L G +S + +++
Sbjct: 237 DEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKV 277
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 122/244 (50%), Gaps = 11/244 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M ER V P+V TYN+L++G+C+ + A ++ EM RG+ PD +F+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTD----------KASEMLHEMVDRGVTPDTVTFNS 50
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ +A K + + L M E+ P+ TY +++ LC ++ A+ L+ E V +G
Sbjct: 51 IMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSG 110
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P TY+ R + A +L ++M + C PN+ TYN LI ++ +
Sbjct: 111 FVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNG-CTPNLVTYNTLIDGLCKASKTEKA 169
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
E+ + S D+ +YT+++ GLC++ + +A + M+++G P +T+ L G
Sbjct: 170 YELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEG 229
Query: 270 LIQS 273
L ++
Sbjct: 230 LCRT 233
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 132/279 (47%), Gaps = 20/279 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT ++ G CK R+D A + + M++RG P+V+TY L+ G+CR
Sbjct: 182 VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGR------ 235
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY---SRAHKPQLSLDKLNFMKEKGICP 117
+ A +F EM + D ++ +++ Y SR + Q +D + +G P
Sbjct: 236 ----VDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI-----RGT-P 285
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ Y +++ C GR+++ + +M G P+ +TYN + A
Sbjct: 286 YIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFL 345
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
M CVP++ +YNI+I ++ R++ + + + + D +Y L+ C+
Sbjct: 346 ESMHSAG-CVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCK 404
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
++++ +A MI+ G+ P VT+ TL GL Q++ L
Sbjct: 405 EERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRL 443
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 146/327 (44%), Gaps = 47/327 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +L+ +CK R D A L MI+ GV+P+ VTYN L++G+ + L
Sbjct: 390 PDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYEL 449
Query: 62 --------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY- 94
E ++ A + D M G+E + +++I +
Sbjct: 450 MHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLC 509
Query: 95 --SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR-NGVS 151
R + L +++ ++++ +YT+V+ LC +++ A +L EMV G+
Sbjct: 510 KEGRLDEASSLLSEMDTLRDE------VSYTTVIIGLCKAEQLDRASKLAREMVAVKGLC 563
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
++ T+N + K + A+ L M + C P++ TYN++I L+++D E
Sbjct: 564 ITSHTFNLLIDAFTKTKRLDEALTLLELMVQRG-CSPSVITYNMVITCLCKLDKVDKAWE 622
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY---- 267
+++ + + SYT+LI+GLC + + KEA Q EM + LY
Sbjct: 623 LFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALR 682
Query: 268 ---RGLIQSDMLRTWRRLKKKLDEESI 291
RG +++L RR+ K+D S+
Sbjct: 683 GQGRGEEAAELL---RRMTTKMDSLSL 706
>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
Length = 458
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 126/260 (48%), Gaps = 11/260 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G+ K D A EM+ R + PNVVTY+ ++ +C+
Sbjct: 202 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCK---------- 251
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A +V + M G+ PD ++S +LH Y + +P+ + LN M+ G+ P V T
Sbjct: 252 AQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVT 311
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR A ++ M + G+ P TY + Y K A M +
Sbjct: 312 YRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGY-ATKGALVEMHALLDLM 370
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ H +NILI + ++D +++ ++ L ++ Y +I LC+
Sbjct: 371 VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSV 430
Query: 242 KEACQYFVEMIEKGLLPQKV 261
+A YF +MI++GL P +
Sbjct: 431 DDAMLYFEQMIDEGLTPNII 450
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 121/295 (41%), Gaps = 32/295 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RRAS----- 54
P++ Y+ LI C+ R+D+ LG +I++G +T+ LL G+C +R S
Sbjct: 93 PDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDI 152
Query: 55 -----------------------LHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
L R ++ + + D+ R G PDV S++ V+
Sbjct: 153 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD-RGGGSPPDVVSYTTVI 211
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ + + + + M + I P V TY+S++ LC ++ A E+L MV+NGV
Sbjct: 212 NGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 271
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P TY+ Y + +M+ D + PN+ TY L+ R R+
Sbjct: 272 PDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGV-EPNVVTYRSLMNYLCKNGRCTKARK 330
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
I++ + L D+ +Y L+ G K E M+ G+ P F L
Sbjct: 331 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNIL 385
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 45/188 (23%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y+S+++G+C + L +M GVEPNVVTY L+N +C+ N R
Sbjct: 271 MPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCK------NGR 324
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTS---------------------------------- 86
K A K+FD M RG+EPD+ +
Sbjct: 325 CTK----ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHH 380
Query: 87 -FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
F+I++ Y++ K ++ + M++ G+ P V Y +V+ LC G ++DA +M
Sbjct: 381 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 440
Query: 146 VRNGVSPS 153
+ G++P+
Sbjct: 441 IDEGLTPN 448
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 7/216 (3%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
A V DE+ +RG + SF+ L +R P ++ N M G + P + TY+
Sbjct: 41 GARHVLDELPLRGWGASIYSFNRTLTDVAR-DSPAAAVSLFNRMARAGADEVTPDLCTYS 99
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C C GR++ LG +++ G A T+ K K + AM + + +
Sbjct: 100 ILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTE 159
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV---KGSELGLDLDSYTMLIHGLCEKQK 240
C+P++ + IL+ NR E+ + + +G D+ SYT +I+G ++
Sbjct: 160 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 219
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+A + EM+ + + P VT+ ++ L ++ +
Sbjct: 220 SDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAM 255
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 136/287 (47%), Gaps = 11/287 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI +CK + A + EM+ G++ + T N LL +C+
Sbjct: 419 PDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCK---------- 468
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK AE++ RG PD S+ V+ Y + +KP+ +L + M ++ + P++ T
Sbjct: 469 EKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYT 528
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K LC+ G++ +A + L E+++ G+ P TYN Y D A + + +M
Sbjct: 529 YNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKML 588
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ P++ T N L+ +++ +++ +D+ +Y LI LC+
Sbjct: 589 ENYF-KPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDV 647
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
A +F +M +GL P T+ + L ++ + + KLDE
Sbjct: 648 DTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDE 694
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 139/304 (45%), Gaps = 23/304 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNER 60
P++ Y L G C+ ++D A + EM V P+VVTYN L++ +
Sbjct: 313 PDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFK--------- 363
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++++ +A + +EMR +G++ + + +IV+ R + + +L +L M E+G+ P V
Sbjct: 364 YQRS-SDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVI 422
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ C + A L+ EMVR+G+ T N K A +L R
Sbjct: 423 TYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSP 482
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ VP+ +Y ++ + N+ + +W+ + +L + +Y LI GLC K
Sbjct: 483 PQRGF-VPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGK 541
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
EA E+++KGL+P T+ + + L E++ F ++
Sbjct: 542 LTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDL-----------EKAFQFHNKMLEN 590
Query: 301 HFKP 304
+FKP
Sbjct: 591 YFKP 594
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 131/308 (42%), Gaps = 47/308 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +++ + K N+ + A EM +R + P++ TYN L+ G+C L E
Sbjct: 488 VPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKL--TEA 545
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K +E+ +G+ PD T+++I++H Y + + + N M E P V
Sbjct: 546 IDK--------LNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVV 597
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +++ LC G++E A +L G TYN + D + A+ + M
Sbjct: 598 TCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADM 657
Query: 181 KEDDLCVPNIHTYNILIGMFMA----------LNRMD------------MVREIWNHVK- 217
+ L P+ TYN+++ L+++D +++ VK
Sbjct: 658 EARGL-QPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKT 716
Query: 218 -------------GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
G+ G D +SY + LC + KEA EM++KG+ T+
Sbjct: 717 GKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYI 776
Query: 265 TLYRGLIQ 272
TL GLI+
Sbjct: 777 TLMEGLIK 784
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 115/283 (40%), Gaps = 48/283 (16%)
Query: 22 MAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80
+A + L RG V P++ N +L+ + R S P + VF + +
Sbjct: 155 LAAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLD--------VFRSLIALRL 206
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
P+ +F++++H + +L L+ M+ G+ P V TY +++K C G + +A
Sbjct: 207 HPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEART 266
Query: 141 LLGEMVRNGVSPSAETYNCFFKEY------------------------------------ 164
LL M + G++P+ TYN Y
Sbjct: 267 LLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLC 326
Query: 165 -RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223
G+ D A KL +M+ + P++ TYN L+ R + ++ +
Sbjct: 327 QAGKVDE--AFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKS 384
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
L ++ +++ GLC + + +EA M E+GL P +T+ TL
Sbjct: 385 SLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTL 427
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 142/285 (49%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + L+ G+CK +++ A+ L M++ ++P+VVTYN L++G C
Sbjct: 269 PNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSI--------- 319
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+ +FD M G+ +V ++ +++ + + +++ M+ + I P V T
Sbjct: 320 -NKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVT 378
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ LC GRI A +L+ EM G P+ TY+ + A+ L +K
Sbjct: 379 YSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLK 438
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+++TY ILI R++ + ++ + LD+ +YT++I G C+K +
Sbjct: 439 DQGI-RPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFF 497
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A +M + G +P T+E + L + D T +L +++
Sbjct: 498 DKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREM 542
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 140/285 (49%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CK+ RI A + L + + V+PN V YN++++ +C+ K +
Sbjct: 169 YGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCK----------AKLVN 218
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A ++ +M + I PDV +++ ++ +S K ++D N MK++ I P V T+ +V
Sbjct: 219 DAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILV 278
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G++ DA+ +L M+++ + P TYN Y N A ++ M +
Sbjct: 279 DGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGV- 337
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+ N+ Y ++ F + +D ++ ++ ++ ++ +Y+ LI GLC+ + A +
Sbjct: 338 IANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALK 397
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM ++G P VT+ ++ L ++ + L L ++ I
Sbjct: 398 LVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI 442
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 122/257 (47%), Gaps = 46/257 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ NV++YT+++ G+CKI +D A EM R + PNVVTY+ L++G+C+
Sbjct: 338 IANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGR------ 391
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A K+ DEM RG P++ ++S +L + H ++ L +K++GI P +
Sbjct: 392 ----IFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMY 447
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++K LC GR+EDA+ + +++ G + Y + + + + A+ L +M
Sbjct: 448 TYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKM 507
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
ED+ C+PN TY ++I L EK +
Sbjct: 508 -EDNGCIPNAKTYE-----------------------------------LVILSLFEKDE 531
Query: 241 WKEACQYFVEMIEKGLL 257
A + EMI +GLL
Sbjct: 532 NDTAEKLLREMIVRGLL 548
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 133/285 (46%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN MY +I CK ++ A +M+ + + P+V TYN L++G + L+
Sbjct: 199 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLN----- 253
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F++M+ I P+V +F+I++ + + K + L M + I P V T
Sbjct: 254 -----YAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVT 308
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ CS ++ A+++ M GV + + Y + K + A+ L+ +M+
Sbjct: 309 YNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMR 368
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PN+ TY+ LI L R+ ++ + + ++ +Y+ ++ LC+
Sbjct: 369 CRKI-IPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHV 427
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A + ++G+ P T+ L +GL QS L + + + L
Sbjct: 428 DKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDL 472
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 130/299 (43%), Gaps = 46/299 (15%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ LI + ++ ++ +++++G P +T+N L+ G+C + +H F
Sbjct: 99 FNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFH---- 154
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
D++ +G D S+ +++ + + +L L + K + P Y ++
Sbjct: 155 ------DKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMII 208
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+C + DA +L +MV + P TYN + N A+ L+ +MK++++
Sbjct: 209 DNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENIN 268
Query: 187 VPNIHTYNILIGMF-----------------------------------MALNRMDMVRE 211
PN++T+NIL+ F ++N+++ ++
Sbjct: 269 -PNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKD 327
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
I++ + + ++ YT +++G C+ + EA F EM + ++P VT+ +L GL
Sbjct: 328 IFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGL 386
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 36/237 (15%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A + +M + GIE D +F+I+++ +S+ LS + +KG PT T+ +++K
Sbjct: 80 ALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIK 139
Query: 128 --C---------------------------------LCSCGRIEDAEELLGEMVRNGVSP 152
C LC GRI A +LL + V P
Sbjct: 140 GLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQP 199
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
+A YN K N A LY QM +C P++ TYN LI F A+++++ ++
Sbjct: 200 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRIC-PDVFTYNALISGFSAVSKLNYAIDL 258
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+N +K + ++ ++ +L+ G C++ K +A M++ + P VT+ +L G
Sbjct: 259 FNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDG 315
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/259 (18%), Positives = 107/259 (41%), Gaps = 23/259 (8%)
Query: 53 ASLHPNERFEKTIRNAEKVFDEMRVRGIEPD--VTSFS-IVLH----------------- 92
++ PN F ++ ++F ++ + E + ++SF+ ++LH
Sbjct: 12 SNFTPNPNFIGLFPSSIRLFSQLHHKQDEENNLISSFNHLLLHKNPTPPTFQFNKILSSL 71
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
V ++ H LSL + M+ GI T+ ++ C G + + ++++ G P
Sbjct: 72 VKAKHHSTALSLHQQ--MELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHP 129
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
+A T+N K + + A+ + ++ + + +Y LI + R+ ++
Sbjct: 130 TAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQV-SYGTLINGLCKVGRITAALQL 188
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
V G + + Y M+I +C+ + +A + +M+ K + P T+ L G
Sbjct: 189 LKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSA 248
Query: 273 SDMLRTWRRLKKKLDEESI 291
L L K+ +E+I
Sbjct: 249 VSKLNYAIDLFNKMKKENI 267
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 126/265 (47%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+ LI G C+ ++D A L EMI+ G +PNVVTY LL+G+C+ L
Sbjct: 85 PNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL------ 138
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +F M RG PD +++++ +S+ + M EKG PTV T
Sbjct: 139 ----KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ G + L +M+R G P+ T+N + D A +L+ +M+
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR 254
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P++ +YN L+ + + + + + S +G D+ SY +LI G +
Sbjct: 255 SLG-CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
A + F E+ + GL P ++ T+
Sbjct: 314 DHAIKLFYEIPKSGLEPDAFSYSTI 338
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 128/280 (45%), Gaps = 11/280 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y L+ K R D +M+ G PN TY LL +C+ +RFE+
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQA------QRFEE--- 70
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A VF M +G P+V S+SI++ R K + + LN M + G P V TY S++
Sbjct: 71 -ARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G++++A +L MV G P YN + + D A +L+ +M E C
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKG-C 188
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+P + TYN L+ F V+ ++ + ++ ++ L+ G C+ EA +
Sbjct: 189 IPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHR 248
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
F+EM G P V++ TL RG+ +RL +++
Sbjct: 249 LFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREM 288
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 52/273 (19%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ + +L+ G+CK+ + A R EM G P+VV+YN L+ G+C + H
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPH---- 279
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A+++ EM G+ PD+ S++I++ YS++ ++ + + G+ P
Sbjct: 280 ------EAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAF 333
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY-NCFFKEYRGRKDANGAMKLYRQ 179
+Y++++ CLC G++ A + +M+ NG +P A RG + + +L++
Sbjct: 334 SYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTE-SCELFQA 392
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + + CVP I YN +L++ LC+ +
Sbjct: 393 MVKFE-CVPLIPEYN-----------------------------------LLMYKLCKAK 416
Query: 240 KWKEACQYFVEMIEKGLLP----QKVTFETLYR 268
+ + C+ F E+ E+G P KV ETL R
Sbjct: 417 RSDDVCEIFHELTERGFSPDVEISKVILETLRR 449
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
S++ +L V +++ + N M G P TY +++ LC R E+A + M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 146 VRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
G SP+ +Y+ RG+K + A +L +M D PN+ TY L+ +
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQK-VDEAAELLNEMI-DGGHQPNVVTYGSLLSGLCKMG 136
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
++ ++++ + D Y +LI G +K EA + F EM+EKG +P T+
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196
Query: 265 TLYRGL--------IQS---DMLR 277
+L G +QS DMLR
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLR 220
>gi|449435418|ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 144/287 (50%), Gaps = 16/287 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N ++ SL+ G+CK RI A M + G EP+++TYN+LLN C L E
Sbjct: 218 NNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLML---ELAG 274
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K+++ E++ G+EPDV S++ +L +A++ + +N M EKG+C TV +Y
Sbjct: 275 KSMKKMERI-------GMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGLCDTV-SY 326
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+V+ LC A L EM + V+P T+ K + + A L + M +
Sbjct: 327 NTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQ 386
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L +P++ Y ++ F +++M + ++ + + D+ SY LI+GLC+ K
Sbjct: 387 TVL-IPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVS 445
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML----RTWRRLKKK 285
EA + EM +G P +VTF+ + GL++ L + W ++ +K
Sbjct: 446 EAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEK 492
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 14/227 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y L+ G CK NR+D A + + M E+G+ + V+YN ++ +C+ +
Sbjct: 287 PDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGL-CDTVSYNTVIGALCKSFA------- 338
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R A ++F+EM + + PDV +F+ ++ + P ++ L M + + P +
Sbjct: 339 ---TRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIF 395
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+VV C +IE A+ + +M+ G+SP +YN + AM LY +M+
Sbjct: 396 YTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQ 455
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
C P+ T+ ++IG + + + ++W+ + E G LD +
Sbjct: 456 IRG-CYPDEVTFKLIIGGLLRKKELSLACQVWDQMM--EKGYTLDKF 499
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 138/287 (48%), Gaps = 14/287 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+ I C+I + R L +M + G P++ +N+ LN + R E +
Sbjct: 82 YSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFR----------ENLLE 131
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A K FDEM +G EPDV +++I++ +A + +++ M KG+ P + T++V
Sbjct: 132 LALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALV 191
Query: 127 KCLCSCGRIEDAEEL-LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
LC G+++ A EL +GEM + + + +N + + A+ + M +
Sbjct: 192 VGLCDGGKVDLAYELTVGEM-KGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHG- 249
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
C P++ TYNIL+ F +++ + ++ + D+ SY L+ GLC+ + +A
Sbjct: 250 CEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAY 309
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ M EKGL V++ T+ L +S R RL +++ ++ +
Sbjct: 310 KLMNTMWEKGLC-DTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVA 355
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 66/114 (57%), Gaps = 10/114 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ YT+++ +CK +I+MA+ +MIE G+ P+VV+YN L+NG+C+ +
Sbjct: 390 IPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASK------ 443
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG 114
+ A +++EM++RG PD +F +++ R + L+ + M EKG
Sbjct: 444 ----VSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKG 493
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 116 CPTVA-TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
CP + Y + L S R + AE M+ G S + TY+ F K+
Sbjct: 40 CPVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPFTYSRFISALCEIKNFGLIG 99
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
+L MK+ +P+I +NI + + N +++ + ++ + D+ +YT+++
Sbjct: 100 RLLEDMKQLGY-LPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDR 158
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
LC+ +++ +A +++ M+ KGL P L GL
Sbjct: 159 LCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGL 194
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A++++ +M + D C YN IG+ ++ +R D+ ++ + L +Y+ I
Sbjct: 28 AIRIFDEMTQSD-CPVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPFTYSRFI 86
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
LCE + + + +M + G LP F L + ++L L K +E +
Sbjct: 87 SALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLL----ELALKFFDEMVA 142
Query: 293 FGSE 296
G E
Sbjct: 143 KGRE 146
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 30/314 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PN MYT++I G+CK ++D A L EM ERGV+ +V+ ++ L+ G+CR+ +
Sbjct: 109 PNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQ 168
Query: 56 --------HPNERFEKTIRN----------AEKVFDEMRVR-----GIEPDVTSFSIVLH 92
PN T+ N A ++FD+M R G EPDV S+S V+
Sbjct: 169 FKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVID 228
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+A + + + M+ G P V TY+S++ LC R + ELL M G
Sbjct: 229 ALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGI 288
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
+ +N + A + + ++ + PN+ TYN+ + R+D I
Sbjct: 289 NIIDFNAMLHALWKNDEQEKACQFFERLLKSGK-KPNVVTYNVAVHGLCKAGRVDEAYRI 347
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ S++ D+ +Y+ +I G C+ + +A F M+ +P VTF TL G +
Sbjct: 348 LLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSE 407
Query: 273 SDMLRTWRRLKKKL 286
R R+ + +
Sbjct: 408 HKKSREAFRVHEDM 421
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 139/295 (47%), Gaps = 17/295 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N L+ + K R + A R L E +E PN + Y ++NG C+ + ++ FE
Sbjct: 75 NAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQV--DQAFE 132
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ DEM+ RG++ DV S ++ R + +L++ M E+ P V TY
Sbjct: 133 --------LLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITY 183
Query: 123 TSVVKCLCSCGRIEDAEELLGEM-----VRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+VV LC RI++A EL +M +G P +Y+ + + A + +
Sbjct: 184 NTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYF 243
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
++M+ C PN+ TY+ LI ++R E+ H+K G+++ + ++H L +
Sbjct: 244 KRMRAVG-CAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWK 302
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ ++ACQ+F +++ G P VT+ GL ++ + R+ ++ E +T
Sbjct: 303 NDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVT 357
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 134/296 (45%), Gaps = 26/296 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--RAS----- 54
P+V Y+++I CK R+D A + M G PNVVTY+ L++G+C+ R S
Sbjct: 218 PDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLEL 277
Query: 55 -LHPNER------------FEKTIRNAEK-----VFDEMRVRGIEPDVTSFSIVLHVYSR 96
LH E+ +N E+ F+ + G +P+V ++++ +H +
Sbjct: 278 LLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCK 337
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + L M E + P V TY+S++ C GR++ A+++ M+ + P T
Sbjct: 338 AGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVT 397
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+ + K + A +++ M +P + TYN+L+ + ++ EI++ +
Sbjct: 398 FMTLLHGFSEHKKSREAFRVHEDMVNAGF-IPGLQTYNVLMDCVCGADSVESALEIYHKM 456
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
K + D ++Y LI LC ++ EA ++ M ++P L L +
Sbjct: 457 KRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCK 512
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 135/302 (44%), Gaps = 29/302 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PNV Y ++G CK R+D A R L EM+E V P+V+TY+ +++G C+ +
Sbjct: 323 PNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDV 382
Query: 56 -----------HPNERF--------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
HP K R A +V ++M G P + ++++++
Sbjct: 383 FTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCG 442
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + +L+ + MK K P TY +++CLC R+++A+E L M + V P+
Sbjct: 443 ADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAI 502
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+ + + + + A + + E C P T+ IL+ + + ++ +
Sbjct: 503 CHALVEVLCKQGEVDEACSVLDNVVEVG-CQPLGETFKILVEELYLRKKWEAASKL---L 558
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ D +Y++ + +C+ K EA + +M+ KG+ P + T+ + R L D +
Sbjct: 559 RSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRV 618
Query: 277 RT 278
+
Sbjct: 619 ES 620
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 128/309 (41%), Gaps = 49/309 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAE-----------------------------------RF 26
P+V Y+S+I G+CK R+D A+ R
Sbjct: 358 PDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRV 417
Query: 27 LGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTS 86
+M+ G P + TYNVL++ VC S + +A +++ +M+ + +PD +
Sbjct: 418 HEDMVNAGFIPGLQTYNVLMDCVCGADS----------VESALEIYHKMKRKKRQPDCNT 467
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
++ ++ RA + + + L+ M+ + P A ++V+ LC G +++A +L +V
Sbjct: 468 YAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVV 527
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G P ET+ +E RK A KL R V + TY++ + +
Sbjct: 528 EVGCQPLGETFKILVEELYLRKKWEAASKLLRSPG----FVADAATYSLCVAEICKAGKP 583
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D E+ + + D +Y ++ LC + + A F +M +G P VT+ L
Sbjct: 584 DEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLL 643
Query: 267 YRGLIQSDM 275
+DM
Sbjct: 644 IGEACSADM 652
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 11/203 (5%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G + + + +++L+ + +A + + + L E P YT+V+ C G+++ A
Sbjct: 71 GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
ELL EM GV ++ + + + A++ ++ M E+ C PN+ TYN ++
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE--CSPNVITYNTVVN 188
Query: 199 MFMALNRMDMVREIWNHVK-------GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251
NR+D E+++ ++ G E D+ SY+ +I LC+ Q+ +A +YF M
Sbjct: 189 GLCKANRIDEALELFDDMEKRYEASHGCE--PDVISYSTVIDALCKAQRVDKAYEYFKRM 246
Query: 252 IEKGLLPQKVTFETLYRGLIQSD 274
G P VT+ +L GL + D
Sbjct: 247 RAVGCAPNVVTYSSLIDGLCKVD 269
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 22/201 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+ Y LI C+ R+D A+ FL M V PN + L+ +C++ +
Sbjct: 463 PDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSV 522
Query: 56 ---------HP-NERFEKTI------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK 99
P E F+ + + E +R G D ++S+ + +A K
Sbjct: 523 LDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGK 582
Query: 100 PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC 159
P +++ + M KG+ P TY +V++ LC R+E A +M G +P TY
Sbjct: 583 PDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTL 642
Query: 160 FFKEYRGRKDANGAMKLYRQM 180
E A+ A +++ M
Sbjct: 643 LIGEACSADMADEAFRIFEAM 663
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 75/188 (39%), Gaps = 42/188 (22%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEP----------------------- 37
+PN + +L+ CK +D A L ++E G +P
Sbjct: 497 VPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASK 556
Query: 38 ---------NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
+ TY++ + +C+ P+E E V ++M ++G+ PD ++
Sbjct: 557 LLRSPGFVADAATYSLCVAEICKAGK--PDEAVE--------VIEQMVLKGVRPDEGTYV 606
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
VL + + ++ + M +G P + TYT ++ CS ++A + MV
Sbjct: 607 AVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAA 666
Query: 149 GVSPSAET 156
G +P A+T
Sbjct: 667 GFTPQAQT 674
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 137/273 (50%), Gaps = 11/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT+LI+G+C + + A L EM + + PNV T+N+L++ + +
Sbjct: 230 PDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSK---------- 279
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ A+ + M I+PDV +++ ++ Y + + + M ++G+ P V
Sbjct: 280 EGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQC 339
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC +++A L EM + P TYN A+ L ++MK
Sbjct: 340 YTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMK 399
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + P++++Y IL+ R++ +EI+ + L++ +YT+LI+ LC+ +
Sbjct: 400 EQGI-QPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFF 458
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA +M +KG +P VTF+ + R L + D
Sbjct: 459 DEALDLKSKMEDKGCMPDAVTFDIIIRALFEKD 491
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 131/280 (46%), Gaps = 11/280 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CK R L ++ V+P+VV YN ++N +C+ K +
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKN----------KLLG 214
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A V+ EM V+GI PDV +++ ++H + + + LN MK K I P V T+ ++
Sbjct: 215 DACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILI 274
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
L G++++A+ LL M++ + P TYN Y + A ++ M + +
Sbjct: 275 DALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGV- 333
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++ Y +I +D ++ +K + D+ +Y LI GLC+ + A
Sbjct: 334 TPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIA 393
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
M E+G+ P ++ L GL +S L + + ++L
Sbjct: 394 LCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRL 433
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 143/297 (48%), Gaps = 16/297 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V MY ++I CK + A EMI +G+ P+VVTY L++G C L
Sbjct: 195 PDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHL------ 248
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + +EM+++ I P+V +F+I++ S+ K + + L M + I P V T
Sbjct: 249 ----KEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFT 304
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ ++ A+ + M + GV+P + Y K + AM L+ +MK
Sbjct: 305 YNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMK 364
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ +P+I TYN LI + ++ + +K + D+ SYT+L+ GLC+ +
Sbjct: 365 HKNM-IPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRL 423
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITF 293
++A + F ++ KG + L L ++ LK K+++ +++TF
Sbjct: 424 EDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTF 480
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 136/291 (46%), Gaps = 13/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +LI G C I A F +++ +G + + V+Y L+NG+C+
Sbjct: 125 PNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGE------- 177
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ ++ ++ ++PDV ++ +++ + + D + M KGI P V T
Sbjct: 178 ---TKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G +++A LL EM ++P+ T+N A L M
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294
Query: 182 EDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C+ P++ TYN LI + ++ + + ++ + + D+ YT +I+GLC+ +
Sbjct: 295 KA--CIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKM 352
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EA F EM K ++P VT+ +L GL ++ L L K++ E+ I
Sbjct: 353 VDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGI 403
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ YT++I G CK +D A EM + + P++VTYN L++G+C+ N
Sbjct: 335 PDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCK------NHHL 388
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ I ++ M+ +GI+PDV S++I+L ++ + + + + + KG V
Sbjct: 389 ERAIALCKR----MKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHA 444
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT ++ LC G ++A +L +M G P A T++ + + + + A K+ R+M
Sbjct: 445 YTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREM 503
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 116/291 (39%), Gaps = 46/291 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + LI +C I +A +++RG PN +T N L+ G+C R
Sbjct: 90 PDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGE------- 142
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I+ A D++ +G + D S+ +++ + + + L ++ + P V
Sbjct: 143 ---IKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVM 199
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC + DA ++ EM+ G+SP
Sbjct: 200 YNTIINSLCKNKLLGDACDVYSEMIVKGISP----------------------------- 230
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ TY LI F + + + N +K + ++ ++ +LI L ++ K
Sbjct: 231 -------DVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKM 283
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
KEA M++ + P T+ +L G D ++ + + + + +T
Sbjct: 284 KEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVT 334
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 82/150 (54%), Gaps = 10/150 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y SLI G CK + ++ A M E+G++P+V +Y +LL+G+C+ L
Sbjct: 369 IPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRL----- 423
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A+++F + +G +V +++++++ +A +LD + M++KG P
Sbjct: 424 -----EDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAV 478
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
T+ +++ L + AE++L EM+ G+
Sbjct: 479 TFDIIIRALFEKDENDKAEKILREMIARGL 508
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 135/270 (50%), Gaps = 13/270 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +SL+ G K +I+ A + +++ GV PN+ YN L++ +C+ H
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH----- 384
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE +FD M G+ P+ ++SI++ ++ R K +L L M + G+ +V
Sbjct: 385 -----EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP 439
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C G I AE + EM+ + P+ TY Y + N A++LY +M
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P+I+T+ L+ G+F A D V+ ++N + + + +Y ++I G CE+
Sbjct: 500 GKGI-APSIYTFTTLLSGLFRAGLIRDAVK-LFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+A ++ EM EKG++P ++ L GL
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 133/264 (50%), Gaps = 13/264 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT L++G+C+ +++ A EM++RGV+ ++V Y VL++G SL +R +
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG-----SLKHKDR-----K 664
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ EM RG++PD ++ ++ S+ + + + M +G P TYT+V+
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMKEDDL 185
LC G + +AE L +M P+ TY CF +G D A++L+ + + L
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLL 784
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
N TYN+LI F R++ E+ + G + D +YT +I+ LC + K+A
Sbjct: 785 --ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 246 QYFVEMIEKGLLPQKVTFETLYRG 269
+ + M EKG+ P +V + TL G
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHG 866
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 141/292 (48%), Gaps = 13/292 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT +I C++ + A+ + M G + N+V YNVL++G+C++
Sbjct: 225 PDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK--------- 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A + ++ + ++PDV ++ +++ + + ++ L+ ++ M P+ A
Sbjct: 276 -QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAA 334
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQM 180
+S+V+ L G+IE+A L+ +V GVSP+ YN +GRK + L+ +M
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAEL-LFDRM 393
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L PN TY+ILI MF ++D + + L L + Y LI+G C+
Sbjct: 394 GKIGL-RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + EMI K L P VT+ +L G + RL ++ + I
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 133/318 (41%), Gaps = 31/318 (9%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF----- 61
Y SLI G CK I AE F+ EMI + +EP VVTY L+ G C + ++ R
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 62 --------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
IR+A K+F+EM ++P+ ++++++ Y
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMS 559
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
+ + L M EKGI P +Y ++ LC G+ +A+ + + + + Y
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
+ A+ + ++M + + + ++ Y +LI + + + + L
Sbjct: 620 HGFCREGKLEEALSVCQEMVQRGVDL-DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 281
D YT +I + +KEA + MI +G +P +VT+ + GL ++ +
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738
Query: 282 LKKKLDEES-----ITFG 294
L K+ S +T+G
Sbjct: 739 LCSKMQPVSSVPNQVTYG 756
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 106/264 (40%), Gaps = 46/264 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YTS+I K A MI G PN VTY ++NG+C+
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG-------- 731
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ AE + +M+ P+ ++ L + ++ +L+ KG+ AT
Sbjct: 732 --FVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTAT 789
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C GRIE+A EL+ M+ +GVSP TY E R D A++L+ M
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + R D V +Y LIHG C +
Sbjct: 850 EKGI-------------------RPDRV-----------------AYNTLIHGCCVAGEM 873
Query: 242 KEACQYFVEMIEKGLLPQKVTFET 265
+A + EM+ +GL+P T T
Sbjct: 874 GKATELRNEMLRQGLIPNNKTSRT 897
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ N Y LI G+C+ RI+ A + MI GV P+ +TY ++N +CRR
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRR-------- 835
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A ++++ M +GI PD +++ ++H A + + + N M +G+ P
Sbjct: 836 --NDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
Query: 121 T 121
T
Sbjct: 894 T 894
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 19/211 (9%)
Query: 78 RGIEPDVTSFSIVLHVYSRAH-----------------KPQLSLDKLNFMKEKGICPTVA 120
RG + SF I++H +A+ KP + L EK + +
Sbjct: 98 RGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSS 157
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMV-RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
++ +++ R+ D + M+ + + P T + + AM+L+
Sbjct: 158 SFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + P+++ Y +I L + +E+ H++ + +++ Y +LI GLC+KQ
Sbjct: 218 MVSVGI-RPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQ 276
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
K EA ++ K L P VT+ TL GL
Sbjct: 277 KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 143/301 (47%), Gaps = 46/301 (15%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERG---------------------------------- 34
+L+YG+C+ +DMA G+M G
Sbjct: 272 TLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGEL 331
Query: 35 -VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
+ PN+ YN LLN +C+ N F + A+++ +EM +G+EP+ +++I++H
Sbjct: 332 RMVPNIFAYNALLNNMCK------NGMFSE----ADRLVNEMSDKGLEPNEVTYAILIHS 381
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ +L L+ M+EKG+ TV Y S++ C C ++ A L EMV G++P+
Sbjct: 382 LCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPN 441
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
A +Y+ + D +GA++L+R+M E + N +T+ LI F +MD ++
Sbjct: 442 AASYSPVIAGLCRKGDLSGAVELHRKMAEKGV-AWNTYTFTALINGFCKAKKMDEASRLF 500
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
N + S L + ++ +I G C ++A Q + +M+ +GL P T+ +L GL +
Sbjct: 501 NKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLT 560
Query: 274 D 274
D
Sbjct: 561 D 561
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 11/255 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y SLI CK + +DMA FL EM+E G+ PN +Y+ ++ G+CR+ L
Sbjct: 410 YNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDL----------S 459
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++ +M +G+ + +F+ +++ + +A K + N M E + P T+ +V+
Sbjct: 460 GAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVI 519
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ C G I A +L +M+ G++P TY A+ A + + E++
Sbjct: 520 EGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADL-ENNCS 578
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
V N + L+ F R+ +WN + LDL S+T++++ ++ +++C
Sbjct: 579 VLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCV 638
Query: 247 YFVEMIEKGLLPQKV 261
F EM EKG+ P V
Sbjct: 639 LFREMKEKGVRPDNV 653
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRN 67
T+L++G+C+ R+ A EM G + +++++ +++ ++ H +E+
Sbjct: 586 TALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQ---HDSEK------- 635
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
+ +F EM+ +G+ PD + ++++YS+ +L+ + M G P TYT++V
Sbjct: 636 SCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVN 695
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
LC + AE L EM+ + P++ T+NCF + + A LY M + L
Sbjct: 696 NLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFL-- 753
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
NI + N LI F + ++ ++ + + D SY+ +IH LC+K EA +
Sbjct: 754 ANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIEL 813
Query: 248 FVEMIEKGLLPQKVTFETLYR 268
+ EM+ KG+ P V + L R
Sbjct: 814 WNEMLYKGVKPDIVAYNILIR 834
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 132/290 (45%), Gaps = 11/290 (3%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+YT+ I +C++ +D A+ + M + G + + V YNVL+ G+C+ N+R +
Sbjct: 199 VYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCK------NQR----V 248
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
R A V + M RG+ D + +++ + R + ++L+ M G P+ A + +
Sbjct: 249 REAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFM 308
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ L GR+E+A L ++ + P+ YN + A +L +M + L
Sbjct: 309 LDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGL 368
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
PN TY ILI MD + + ++ + + + Y LI+ C+K A
Sbjct: 369 -EPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAM 427
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
+ EM+E GL P ++ + GL + L L +K+ E+ + + +
Sbjct: 428 GFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNT 477
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YT+L+ CK + AE EM+ PN T+N L+
Sbjct: 684 LPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFAT--------- 734
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A+ ++ M ++G ++ S + ++ + + + Q ++D ++ E G P
Sbjct: 735 -EGNLETAKDLYFAM-LQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCI 792
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y++V+ LC G I +A EL EM+ GV P YN + +++ + +Y M
Sbjct: 793 SYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDM 852
Query: 181 KEDDLCVPNIHTYNIL 196
+ + PN HT+ L
Sbjct: 853 VKKGV-QPNWHTHRAL 867
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 1/182 (0%)
Query: 107 LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRG 166
L+ GI P T + ++ L + A L M+ +GV Y + Y
Sbjct: 150 LHLSLSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCE 209
Query: 167 RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
++ +GA L +M+++ V + YN+LI R+ ++ N + + D
Sbjct: 210 VRNLDGAKGLVARMQDEGDKVSAV-PYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEV 268
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ L++G C ++ A + +M G +P + + GL + + RL +L
Sbjct: 269 TCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQL 328
Query: 287 DE 288
E
Sbjct: 329 GE 330
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 89/239 (37%), Gaps = 48/239 (20%)
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI PD + S +L + + L+ + M G+ YT+ ++ C ++ A
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGA 216
Query: 139 EELLGEMVRNGVSPSAETYN------CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
+ L+ M G SA YN C + R D +M L R + D++ T
Sbjct: 217 KGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSM-LARGVAADEV------T 269
Query: 193 YNILIGMFMALNRMDMVREIWNHVK------------------------------GSELG 222
L+ F +DM E+ + +LG
Sbjct: 270 CRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLG 329
Query: 223 -----LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
++ +Y L++ +C+ + EA + EM +KGL P +VT+ L L + M+
Sbjct: 330 ELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMM 388
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 130/254 (51%), Gaps = 11/254 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++ +Y +I G+ K A + ++ E+G+ P +VT+N L+ G C
Sbjct: 525 DIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFC----------IN 574
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ + A ++ D +++ G+EP+ +++ +++VY Q L+ L+ MK K I PT TY
Sbjct: 575 RKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITY 634
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T V+K LC +++++ +LL +M G++P +YN + + +D A +LY +M
Sbjct: 635 TVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLL 694
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+L P TYNILI F + + ++ ++ L+ +YT +I C K
Sbjct: 695 HNL-EPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVD 753
Query: 243 EACQYFVEMIEKGL 256
+A YF +M+EKG
Sbjct: 754 KAVVYFRQMVEKGF 767
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 148/331 (44%), Gaps = 49/331 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YT LI G C+I ++ A + EMI G + ++++ VLL +C+
Sbjct: 384 PNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCK---------- 433
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A K+F EM G+ PD+ ++S ++H + + Q ++ M I P
Sbjct: 434 SRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLI 493
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ LC G+I A ++ + +S YN Y R + A+KLY+Q+
Sbjct: 494 HGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLG 553
Query: 182 EDDL--------------CV--------------------PNIHTYNILIGMFMALNRMD 207
E + C+ PN TY L+ ++ M
Sbjct: 554 EKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQ 613
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ E+ + +K +G +YT++I GLC++ K +E+CQ +M GL P +V++ T+
Sbjct: 614 SLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTII 673
Query: 268 RGLIQSDMLRTWRRLKKK-----LDEESITF 293
+ ++ +R +L K L+ S+T+
Sbjct: 674 QAFCKARDMRKAFQLYDKMLLHNLEPTSVTY 704
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 144/306 (47%), Gaps = 26/306 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------- 54
P+V + +++ +CK+ +D+A+ F M++ G+ P+ +YN+L++G+C S
Sbjct: 279 PSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDL 338
Query: 55 --------LHPNE----------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
L P+ R I A + +M ++G P++ ++++++ + +
Sbjct: 339 KNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQ 398
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +L M G ++ + T ++ LC +++ A +L EM NG+ P T
Sbjct: 399 IGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLIT 458
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ + + A+ LY +M + + +PN + ++ ++ R ++++
Sbjct: 459 YSTLIHGLCKQGEVQQAILLYEKMCSNRI-IPNSLIHGAILMGLCEKGKISQARMYFDYL 517
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
S L LD+ Y ++I G ++ +EA + + ++ EKG+ P VTF +L G + L
Sbjct: 518 ITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKL 577
Query: 277 RTWRRL 282
RRL
Sbjct: 578 SQARRL 583
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 17/280 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + + SL+YG+C ++ A R L + G+EPN VTY L+N C
Sbjct: 559 PTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCE---------- 608
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +++ ++ EM+ + I P ++++V+ + K Q S L M G+ P +
Sbjct: 609 EGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVS 668
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF---FKEYRGRKDANGAMKLYR 178
Y ++++ C + A +L +M+ + + P++ TYN F Y KDA+ + +
Sbjct: 669 YNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQ 728
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
K + N + Y +I A +D + + + + Y+ +I LC++
Sbjct: 729 NRKVN----LNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKR 784
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
EA +F M+ G+ P + FE L Q L +
Sbjct: 785 CLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNS 824
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 127/270 (47%), Gaps = 18/270 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+++ Y SL+Y + ++ E+ G + T +++++G+CR++ RF+
Sbjct: 213 SIQTYNSLLY---NLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQS------RFQ 263
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A F + + +P V SF+ ++ Y + ++ M + G+ P +Y
Sbjct: 264 ----DAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSY 319
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM-- 180
++ LC G + +A +L +M +G+ P TYN K +R NGA + ++M
Sbjct: 320 NILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLI 379
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + PN+ TY +LI + ++ +++ + L + S T+L+ LC+ ++
Sbjct: 380 KGPN---PNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQ 436
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A + F EM GL P +T+ TL GL
Sbjct: 437 VDVAFKLFCEMEANGLRPDLITYSTLIHGL 466
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 18/183 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y ++I +CK + A + +M+ +EP VTYN+L+NG C L
Sbjct: 664 PDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDL------ 717
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK----LNFMKEKGICP 117
++A+ + ++ R + + +++ ++ +AH + +DK M EKG
Sbjct: 718 ----KDADNLLVSLQNRKVNLNKYAYTTII----KAHCAKGDVDKAVVYFRQMVEKGFEV 769
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
++ Y++V+ LC + +A+ M+ +GV P + + + N +L
Sbjct: 770 SIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELL 829
Query: 178 RQM 180
+M
Sbjct: 830 AEM 832
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 132/269 (49%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ CK + +A L +M ER ++ + V Y+++++G+C+ SL
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD----- 264
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA +F+EM ++G + D+ ++ ++ + A + L M ++ I P V
Sbjct: 265 -----NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++++ C G++ +AEEL EM++ G+SP TY + + A + M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PNI T+NILI + N +D E++ + + D +Y LI G CE K
Sbjct: 380 SKG-CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ A + F EM+ + + P V+++ L GL
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 143/324 (44%), Gaps = 50/324 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+ YTSLI G+CK N++D A L M+ +G PN+ T+N+L+NG C+
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 52 ------RASLHPNERFEKTIRN---------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R + + I+ A+++F EM R + PD+ S+ I+L
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+P+ +L+ +++ + + Y ++ +C+ +++DA +L + GV P +T
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI----GMFMALNRMDMVREI 212
YN + + A L+R+M+ED PN TYNILI G A ++ EI
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDGHS-PNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Query: 213 WN---HVKGSELGL---------------DLDSYTMLIHGLC--EKQKWKEACQYFVEMI 252
V S L D+ ++T L+ C E +A F M
Sbjct: 589 KRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMK 648
Query: 253 EKGLLPQKVTFETLYRGLIQSDML 276
G P VT+ T+ +GL+ +M+
Sbjct: 649 AMGYKPNVVTYNTVIKGLLNGNMI 672
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 138/319 (43%), Gaps = 46/319 (14%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+ +I G CK +D A EM +G + +++ Y L+ G C +
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC----------YAGRWD 299
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ K+ +M R I PDV +FS ++ + + K + + + M ++GI P TYTS++
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C +++ A +L MV G P+ T+N Y + ++L+R+M +
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV- 418
Query: 187 VPNIHTYNILIGMFMALNRMDMVR-----------------------------------E 211
V + TYN LI F L ++++ + E
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
I+ ++ S++ LD+ Y ++IHG+C K +A F + KG+ P T+ + GL
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 272 QSDMLRTWRRLKKKLDEES 290
+ L L +K++E+
Sbjct: 539 KKGSLSEADLLFRKMEEDG 557
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 141/311 (45%), Gaps = 35/311 (11%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G+C++ ++++A+ EM+ R V P++V+Y +LL+G+C P + E
Sbjct: 425 YNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG--EPEKALE---- 478
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+F+++ +E D+ ++I++H A K + D + KG+ P V TY ++
Sbjct: 479 ----IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G + +A+ L +M +G SP+ TYN + + G DA + KL ++K
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS 594
Query: 187 V---------------------PNIHTYNILIGMFMALNRMDM--VREIWNHVKGSELGL 223
V P++ T+ L+ F + ++ ++K
Sbjct: 595 VDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKP 654
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
++ +Y +I GL + +M E+G P VT T GL + D+ + L
Sbjct: 655 NVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLL 714
Query: 284 KKL--DEESIT 292
+K+ D E +T
Sbjct: 715 RKMENDNEDVT 725
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 142/310 (45%), Gaps = 34/310 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+ +++LI G C R+ A + M+E G +P ++T N L+NG+C +
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 56 ---------HPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PNE + A ++ +M R I+ D +SI++ +
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + N M+ KG + YT++++ C GR +D +LL +M++ ++P
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 157 Y----NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
+ +CF KE + R+ A +L+++M + + P+ TY LI F N++D +
Sbjct: 320 FSALIDCFVKEGKLRE----AEELHKEMIQRGIS-PDTVTYTSLIDGFCKENQLDKANHM 374
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ + G ++ ++ +LI+G C+ + + F +M +G++ VT+ TL +G +
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 273 SDMLRTWRRL 282
L + L
Sbjct: 435 LGKLEVAKEL 444
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 128/291 (43%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + ++ L + + D+ +M +G+ N+ T ++++N CR L
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSL---- 125
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ G EPD +FS +++ + +L+ ++ M E G PT+ T
Sbjct: 126 ------AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLIT 179
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++V LC G++ DA L+ MV G P+ TY K AM+L R+M+
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + + + Y+I+I +D ++N ++ D+ YT LI G C +W
Sbjct: 240 ERKIKLDAVK-YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ + +MI++ + P V F L ++ LR L K++ + I+
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 80/197 (40%), Gaps = 14/197 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+VK Y +I G CK + A+ +M E G PN TYN+L+ + +
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Query: 62 ------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF 109
T+R A M G EPDV +F+ +L + + F
Sbjct: 585 IEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLF 644
Query: 110 --MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR 167
MK G P V TY +V+K L + I +L +M G P+A T + F +
Sbjct: 645 KNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQ 704
Query: 168 KDANGAMKLYRQMKEDD 184
A+ L R+M+ D+
Sbjct: 705 DLHGSAILLLRKMENDN 721
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 104/269 (38%), Gaps = 41/269 (15%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A +F EM P + FS + V +R + L LD M+ KGI + T + ++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 127 KCLCSC-----------------------------------GRIEDAEELLGEMVRNGVS 151
C C C GR+ +A EL+ MV G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P+ T N + A+ L +M E PN TY ++ + + + E
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF-QPNEVTYGPVLKVMCKSGQTALAME 233
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ ++ ++ LD Y+++I GLC+ A F EM KG + + TL RG
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 272 QS----DMLRTWRRL-KKKLDEESITFGS 295
+ D + R + K+K+ + + F +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 141/274 (51%), Gaps = 15/274 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +++LI G+C +I A M+ RG +PNV +Y++++ G+CR
Sbjct: 159 PNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVG-------- 210
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
KT K+ + M+V G EPDV ++ ++ + ++ MK GI PTV T
Sbjct: 211 -KTTE-VIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVT 268
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ L + GR ++A LL EM + P ++ + + A + + M
Sbjct: 269 YTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMT 328
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMV--REIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
E + P++ TYN L+ + RM++V R+++ + D+ S+++L++G C+ +
Sbjct: 329 EMGV-EPDVATYNTLMNGYCL--RMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAK 385
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ EA Q F EM +GL+P V++ TL GL Q+
Sbjct: 386 RIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQA 419
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 137/290 (47%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+ +I G C++ + + L M G EP+VV YN +++ +C+
Sbjct: 194 PNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCK---------- 243
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + A +F +M+ GI P V +++ ++H + + + LN MK I P +
Sbjct: 244 DRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVA 303
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ ++ +C G + +A +L M GV P TYN Y R + A K++ M
Sbjct: 304 FSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMI 363
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+P++ +++IL+ + R+D +++++ + L D SY LI GLC+ ++
Sbjct: 364 SKGR-MPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRP 422
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EA + F +M G P VT+ L L + L L + ++ +
Sbjct: 423 LEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGL 472
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 50/288 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP++ ++ LI CK + A L M E GVEP+V TYN L+NG C R
Sbjct: 298 MPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRME------ 351
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A KVF+ M +G PDV SFSI+++ Y +A + + + M +G+ P
Sbjct: 352 ----VVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTV 407
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y +++ LC R +AEEL +M NG P
Sbjct: 408 SYNTLISGLCQARRPLEAEELFKDMHSNGYPP---------------------------- 439
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
N+ TY+IL+ +D ++ ++ S L DL +Y ++I G+C+ K
Sbjct: 440 --------NLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491
Query: 241 WKEACQYFVEMIEKGLLPQK----VTFETLYRGLIQSDMLRTWRRLKK 284
+K+A + F E+ KGL P T + + +G + + + +R+++K
Sbjct: 492 FKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEK 539
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 11/272 (4%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
I+ A M+ P++V + L + + R + KT+ + K +M + G
Sbjct: 72 INDALSAFNHMVNTNPLPSIVKFGELFSALVRM-------KHYKTVVSLSK---QMEMAG 121
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
I DV S +I+++ + R L + + G+ P V T+++++ C G+I A
Sbjct: 122 ISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAI 181
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
EL MV G P+ +Y+ K +KL MK C P++ YN ++
Sbjct: 182 ELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVG-CEPDVVIYNTIVDR 240
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
++ I+ +KG+ + + +YT LIHGL +WKEA EM ++P
Sbjct: 241 LCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPD 300
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
V F L + + + R + K + E +
Sbjct: 301 LVAFSVLIDIMCKEGEVSEARVILKTMTEMGV 332
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 6/217 (2%)
Query: 56 HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA--HKPQLSLDKLNFMKEK 113
H N F + I +A F+ M P + F + R +K +SL K M+
Sbjct: 64 HKNRTF-RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQ--MEMA 120
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGA 173
GI V + T ++ C C ++ +LG++++ G+ P+ T++ + A
Sbjct: 121 GISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRA 180
Query: 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
++L+ M PN+H+Y+I+I + + V ++ H+K D+ Y ++
Sbjct: 181 IELFDVMVARGY-KPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVD 239
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
LC+ + EA F +M G+LP VT+ +L GL
Sbjct: 240 RLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGL 276
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 45/193 (23%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V ++ L+ G+CK RID A++ EM RG+ P+ V+YN L++G+C+ + P E
Sbjct: 368 MPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQ--ARRPLE- 424
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
AE++F +M G P++ ++SI+L S+ ++ M+ G+ P +
Sbjct: 425 -------AEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLV 477
Query: 121 TY-----------------------------------TSVVKCLCSCGRIEDAEELLGEM 145
TY T + +C G +++A + +M
Sbjct: 478 TYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQM 537
Query: 146 VRNGVSPSAETYN 158
++ SP+ N
Sbjct: 538 EKDDCSPAQGCIN 550
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 132/269 (49%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ CK + +A L +M ER ++ + V Y+++++G+C+ SL
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD----- 264
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA +F+EM ++G + D+ ++ ++ + A + L M ++ I P V
Sbjct: 265 -----NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++++ C G++ +AEEL EM++ G+SP TY + + A + M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PNI T+NILI + N +D E++ + + D +Y LI G CE K
Sbjct: 380 SKG-CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ A + F EM+ + + P V+++ L GL
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 140/289 (48%), Gaps = 11/289 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
++ +YT+LI G+C R D + L +MI+R + P+VV ++ L++ +
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK---------- 329
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +R AE++ EM RGI PD +++ ++ + + ++ + L+ M KG P + T
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C I+D EL +M GV TYN + + A +L+++M
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I +Y IL+ + EI+ ++ S++ LD+ Y ++IHG+C K
Sbjct: 450 SRRV-RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+A F + KG+ P T+ + GL + L L +K++E+
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 30/276 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+ YTSLI G+CK N++D A L M+ +G PN+ T+N+L+NG C+
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 52 ------RASLHPNERFEKTIRN---------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R + + I+ A+++F EM R + PD+ S+ I+L
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+P+ +L+ +++ + + Y ++ +C+ +++DA +L + GV P +T
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + A L+R+M+ED PN TYNILI + ++ +
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDGHS-PNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
K +D + M++ L + + K F++M+
Sbjct: 589 KRCGFSVDASTVKMVVDMLSDGRLKKS----FLDML 620
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 128/291 (43%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + ++ L + + D+ +M +G+ N+ T ++++N CR L
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSL---- 125
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ G EPD +FS +++ + +L+ ++ M E G PT+ T
Sbjct: 126 ------AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLIT 179
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++V LC G++ DA L+ MV G P+ TY K AM+L R+M+
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + + + Y+I+I +D ++N ++ D+ YT LI G C +W
Sbjct: 240 ERKIKLDAVK-YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ + +MI++ + P V F L ++ LR L K++ + I+
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 104/269 (38%), Gaps = 41/269 (15%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A +F EM P + FS + V +R + L LD M+ KGI + T + ++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 127 KCLCSC-----------------------------------GRIEDAEELLGEMVRNGVS 151
C C C GR+ +A EL+ MV G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P+ T N + A+ L +M E PN TY ++ + + + E
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF-QPNEVTYGPVLKVMCKSGQTALAME 233
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ ++ ++ LD Y+++I GLC+ A F EM KG + + TL RG
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 272 QS----DMLRTWRRL-KKKLDEESITFGS 295
+ D + R + K+K+ + + F +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 128/270 (47%), Gaps = 15/270 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y LI G+C++ ++ A R EM+E+G P+V TY +L+ G SL F
Sbjct: 405 PTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREF 464
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
FDEM +G+ PD +++ + S + +GI T
Sbjct: 465 ----------FDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVT 514
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G ++DAEEL+ +M+ NG+ P TY C + R A K + M
Sbjct: 515 YNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMI 574
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLCEKQ 239
D L P+ TY ++I + R ++ K E G++ + +Y +LIH LC
Sbjct: 575 SDGL-PPSAVTYTVIIHAY--CRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMG 631
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + A ++F EM+E+GL+P K T+ L G
Sbjct: 632 RTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP V Y ++I+G + +I+ A+ EM G+ P+V+TYN LLNG C+ +
Sbjct: 334 MPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQ----- 388
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A +F ++R G+ P V +++I++ Y R + + M E+G P V
Sbjct: 389 -----KEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVY 443
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++K + + E EM+ G+ P YN D + + +L +
Sbjct: 444 TYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVI 503
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + + TYNILI + E+ + + L D +YT LIH CE+
Sbjct: 504 MLEGISSDTV-TYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGF 562
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+EA ++F +MI GL P VT+ + + L + +K+ EE +
Sbjct: 563 LREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGV 613
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 119/276 (43%), Gaps = 11/276 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI G + + EM G+ P VVTYN +++G+ + I
Sbjct: 305 YNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQ----------IE 354
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A+ F EMR G+ PDV +++ +L+ Y +A + +L ++ G+ PTV TY ++
Sbjct: 355 AAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILI 414
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G +E+A L EMV G P TY K + + +M L
Sbjct: 415 DGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGL- 473
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+ YN I + L + ++ + + D +Y +LI GLC+ K+A +
Sbjct: 474 RPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEE 533
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++MI GL P +T+ L + LR R+
Sbjct: 534 LMMQMISNGLQPDCITYTCLIHAHCERGFLREARKF 569
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 14/263 (5%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
EM GV P+V N +L V R A+ R++ + V EM GIEP + +++
Sbjct: 186 EMASHGVAPDVKDCNKVLR-VLRDAA-----RWD----DMSAVHAEMLQLGIEPSIVTYN 235
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKG--ICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
+L +S+ + L M+ +G P TY V+ L G +E+A EL+ EM
Sbjct: 236 TLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEM- 294
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
R S+ TYN R L +M E++ +P + TYN +I + ++
Sbjct: 295 RLSKKASSFTYNPLITGLLARGFVKKVDDLQLEM-ENEGIMPTVVTYNAMIHGLLQSGQI 353
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + + ++ L D+ +Y L++G C+ KEA F ++ GL P +T+ L
Sbjct: 354 EAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNIL 413
Query: 267 YRGLIQSDMLRTWRRLKKKLDEE 289
G + L RRLK+++ E+
Sbjct: 414 IDGYCRLGDLEEARRLKEEMVEQ 436
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 8/176 (4%)
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
L L M G+ P V V++ L R +D + EM++ G+ PS TYN
Sbjct: 179 LCLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLL 238
Query: 162 KEY--RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
+ GRKD M L C+PN TYN++I L R + E V+
Sbjct: 239 DSFSKEGRKDKID-MLLKEMEARGSSCLPNDVTYNVVIA---GLARKGYLEEAAELVEEM 294
Query: 220 ELGLDLDSYTM--LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
L S+T LI GL + K+ +EM +G++P VT+ + GL+QS
Sbjct: 295 RLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQS 350
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 144/295 (48%), Gaps = 14/295 (4%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
V +YT++I + + + + L M + V P+++TYN ++N C R L +E
Sbjct: 171 VYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINA-CARGGLD----WEG 225
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF--MKEKGICPTVAT 121
+ +F EMR GI+PDV +++ +L + AH+ ++ F M E GI P + T
Sbjct: 226 LL----GLFAEMRHEGIQPDVITYNTLLG--ACAHRGLGDEAEMVFRTMNESGIVPDINT 279
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ +V+ R+E ELL EM G P +YN + Y AM ++RQM+
Sbjct: 280 YSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQ 339
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
CV N TY++L+ ++ R D VR+I+ +K S D +Y +LI E +
Sbjct: 340 AAG-CVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYF 398
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSE 296
KE F +M+E+ + P T+E L + + +++ ++E+ I S+
Sbjct: 399 KEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSK 453
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 16/234 (6%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+PN Y +++ + R E + +VFDEM G+ V ++ V++ Y
Sbjct: 133 KPNEHIYTIMITLLGR----------EGLLDKCREVFDEMPSNGVARTVYVYTAVINAYG 182
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLG---EMVRNGVSP 152
R + SL+ LN MK++ + P++ TY +V+ C+ G + D E LLG EM G+ P
Sbjct: 183 RNGQFHASLELLNGMKQERVSPSILTYNTVINA-CARGGL-DWEGLLGLFAEMRHEGIQP 240
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
TYN R + A ++R M E + VP+I+TY+ L+ F LNR++ V E+
Sbjct: 241 DVITYNTLLGACAHRGLGDEAEMVFRTMNESGI-VPDINTYSYLVQTFGKLNRLEKVSEL 299
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ D+ SY +L+ E KEA F +M G + T+ L
Sbjct: 300 LREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVL 353
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 124/291 (42%), Gaps = 26/291 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y+ L+ + K+NR++ L EM G P++ +YNVLL S+
Sbjct: 274 VPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMD 333
Query: 61 FEKTIRNA-------------------------EKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ ++ A +F EM+V +PD +++I++ V+
Sbjct: 334 VFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFG 393
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + M E+ + P + TY ++ G EDA+++L M G+ PS++
Sbjct: 394 EGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSK 453
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
Y + + A+ ++ M E P + TYN I F I +
Sbjct: 454 AYTGVIEAFGQAALYEEALVVFNTMNEVG-SNPTVETYNSFIHAFARGGLYKEAEAILSR 512
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ S L D+ S+ +I + +++EA + +VEM + P ++T E +
Sbjct: 513 MNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVV 563
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 11/251 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI + + +M+E VEPN+ TY L+ C + L+
Sbjct: 380 PDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFA-CGKGGLY----- 433
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A+K+ M +GI P +++ V+ + +A + +L N M E G PTV T
Sbjct: 434 ----EDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVET 489
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S + G ++AE +L M +G+ ++N K +R A+K Y +M+
Sbjct: 490 YNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEME 549
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + C PN T +++ ++ + +D E + +K S + + Y +++ + +
Sbjct: 550 KAN-CEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRL 608
Query: 242 KEACQYFVEMI 252
+A EMI
Sbjct: 609 NDAYNLIDEMI 619
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 133/334 (39%), Gaps = 31/334 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLG---EMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
P++ Y ++I C +D E LG EM G++P+V+TYN LL R
Sbjct: 204 PSILTYNTVINA-CARGGLDW-EGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEA 261
Query: 59 ERFEKTIRNAEKVFD-------------------------EMRVRGIEPDVTSFSIVLHV 93
E +T+ + V D EM G PD+TS++++L
Sbjct: 262 EMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEA 321
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Y+ + ++D M+ G ATY+ ++ GR +D ++ EM + P
Sbjct: 322 YAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPD 381
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
A TYN + + + L+ M E+++ PN+ TY LI + ++I
Sbjct: 382 AGTYNILIQVFGEGGYFKEVVTLFHDMVEENV-EPNMETYEGLIFACGKGGLYEDAKKIL 440
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
H+ + +YT +I + ++EA F M E G P T+ + +
Sbjct: 441 LHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARG 500
Query: 274 DMLRTWRRLKKKLDEESITFGSEFQNYHFKPYRR 307
+ + + +++E + N K +R+
Sbjct: 501 GLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQ 534
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V+ Y S I+ + + AE L M E G++ +V ++N GV + + ++
Sbjct: 485 PTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFN----GVIK--AFRQGGQY 538
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + K + EM EP+ + +VL VY A S ++ +K GI P+V
Sbjct: 539 EEAV----KSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMC 594
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
Y ++ R+ DA L+ EM+ VS
Sbjct: 595 YCLMLALYAKNDRLNDAYNLIDEMITMRVS 624
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 55/114 (48%)
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
S + FKE+ R D +++L++ M+ C PN H Y I+I + +D RE+
Sbjct: 99 SLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREV 158
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ + + + + YT +I+ ++ + + M ++ + P +T+ T+
Sbjct: 159 FDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTV 212
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 145/296 (48%), Gaps = 17/296 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIER------GVEPNVVTYNVLLNGVCRRASL 55
PNV Y +LI G C + I++A ++ EM+ PNV++Y+++++G+C+ +
Sbjct: 194 PNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGN- 252
Query: 56 HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
+E+ I +F+EM +G++P+V +FS+++ + + + + L M + GI
Sbjct: 253 -----WEEAIC----LFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGI 303
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P + TYTS++K C G + A+EL M G P +YN Y AMK
Sbjct: 304 VPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMK 363
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
L+ +M + P++ T +L+ ++D +E++ +K + DL + + GL
Sbjct: 364 LFNEMLHVGMW-PDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGL 422
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
C+ EA + F E+ + TF L GL ++ L T L +KL EE I
Sbjct: 423 CKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGI 478
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 159/320 (49%), Gaps = 36/320 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PNV Y+ +I G CK+ + A EM+++GV+PNVVT++VL++ +C+
Sbjct: 235 PNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKL 294
Query: 54 -------SLHPNERFEKT-----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ PN F T + +A+++F M +G EPDV S++++++ Y
Sbjct: 295 LEMMIQIGIVPN-LFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYC 353
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ K + ++ N M G+ P V T ++K L G+++DA+EL +++ P
Sbjct: 354 KTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELF-RVIKPYAMPKDL 412
Query: 156 TYNCFFKEYRGRKDANG----AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
C F + + NG AMKL+ +++ ++ + +I T+ LI +++ E
Sbjct: 413 CICCIFLDGLCK---NGYIFEAMKLFNELESYNMKL-DIETFGCLIDGLCKAGKLETAWE 468
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
++ + + D +Y+ +IHG C+K + +A F +M E G P +T+ L RG
Sbjct: 469 LFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFY 528
Query: 272 QSDMLRTWRRLKKKLDEESI 291
+S+ L +L ++ E+ +
Sbjct: 529 ESNKLEKVVQLLHRMIEKDV 548
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 125/278 (44%), Gaps = 23/278 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ LI C +NRI+ + ++ RG P+VVT+ L+ G+C
Sbjct: 124 PDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLC----------V 173
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIV---------LHVYSRAHKPQLSLDKLNFMKE 112
E I A K+F M+ G P+V ++ + +++ + H+ L+
Sbjct: 174 EHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNC 233
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
+ P V +Y+ ++ LC G E+A L EMV GV P+ T++
Sbjct: 234 R---PNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIK 290
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A KL M + + VPN+ TY LI F + ++ +E++ + D+ SY MLI
Sbjct: 291 AKKLLEMMIQIGI-VPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLI 349
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+G C+ K +EA + F EM+ G+ P T L + L
Sbjct: 350 NGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKAL 387
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 46/278 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ YTSLI G+C + ++ A+ M +G EP+V++YN+L+NG C+
Sbjct: 304 VPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLK------ 357
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE-------- 112
+ A K+F+EM G+ PDV + ++L A K + + +K
Sbjct: 358 ----VEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLC 413
Query: 113 ------KGICPT---------------------VATYTSVVKCLCSCGRIEDAEELLGEM 145
G+C + T+ ++ LC G++E A EL ++
Sbjct: 414 ICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKL 473
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
G+ P A Y+ + + + A L+++M+E+ C P++ TY+IL+ F N+
Sbjct: 474 YEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENG-CSPDLITYSILMRGFYESNK 532
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
++ V ++ + + ++ D Y ++ +C+ +K+KE
Sbjct: 533 LEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKE 570
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 132/275 (48%), Gaps = 22/275 (8%)
Query: 15 CKINRIDM--AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
CK I + A +F M+ ++ ++N LL G+ + H ++ F ++
Sbjct: 70 CKTGSISVTQAHQFFDLMMR-----SIFSFNRLLAGLAKIE--HYSQVFS--------LY 114
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
+M + G+ PD+ + +I+++ ++ L + + +G P V T+T+++K LC
Sbjct: 115 KQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVE 174
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL-----CV 187
RI +A +L M + G +P+ TY K + N A+K +++M D C
Sbjct: 175 HRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCR 234
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
PN+ +Y+I+I + + ++N + + ++ ++++LI LC++ + +A +
Sbjct: 235 PNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKL 294
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
MI+ G++P T+ +L +G L + + L
Sbjct: 295 LEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 49/104 (47%)
Query: 167 RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
K G++ + + + DL + +I ++N L+ + V ++ + + L DL
Sbjct: 68 HKCKTGSISVTQAHQFFDLMMRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLL 127
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ +LI+ LC + E ++ +G +P VTF TL +GL
Sbjct: 128 TLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGL 171
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 123/253 (48%), Gaps = 11/253 (4%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
+ +Y +I G+ K+ I A R ++IE+G+ P +VT+N L+ G C++ L
Sbjct: 515 IILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKL-------- 566
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
A K+ D ++V G+ P +++ +++ Y D L+ M+ K I PT TYT
Sbjct: 567 --AEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYT 624
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
VVK LC GR+ ++ +LL M G+ P TYN + + D A +L+ QM +
Sbjct: 625 VVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQH 684
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
L P+ TYN+LI + + ++ + L +YT +I C K +
Sbjct: 685 SL-QPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQN 743
Query: 244 ACQYFVEMIEKGL 256
A +F +M+E+G
Sbjct: 744 ALVFFHQMVERGF 756
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 138/294 (46%), Gaps = 26/294 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + +L+ G+CK+ +D+A+ F MI+ G+ P+V +YN+LL+G+C S+ F
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF 327
Query: 62 EKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ N A KV M + G+ PD+ +++I++ + +
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ S M +G+ ++ TYT ++ LC GRI++A LL EM G+ P T
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ R A++LY +M + PN + +I + + ++ V
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKRI-YPNSFVCSAIISGLFEKGAISEAQMYFDSV 506
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
S++ ++ Y ++I G + EA + + ++IEKG+ P VTF +L G
Sbjct: 507 TKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGF 560
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 11/263 (4%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI G C+ +R+ A FL E P+VV++N L++G C+ S+ + F
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSF-------- 292
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
F M G+ PDV S++I+LH A + +L+ N M+ G+ P + TY +
Sbjct: 293 --FCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGF 350
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
G I A +++ M+ NG++P TY + + + KL +M L + +
Sbjct: 351 RILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKL-S 409
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
I TY +L+ R+D + + ++ L DL +Y++LIHGLC++ +EA + +
Sbjct: 410 IVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYE 469
Query: 250 EMIEKGLLPQKVTFETLYRGLIQ 272
EM K + P + GL +
Sbjct: 470 EMCSKRIYPNSFVCSAIISGLFE 492
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 142/314 (45%), Gaps = 61/314 (19%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS-------- 54
++ YT L+ CK RID A L EM G++P+++TY+VL++G+C+R +
Sbjct: 409 SIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELY 468
Query: 55 -------LHPNE---------RFEK-TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
++PN FEK I A+ FD + + ++ ++I++ Y++
Sbjct: 469 EEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKL 528
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
++ + EKGI PT+ T+ S++ C G++ +A +LL + +G+ P++ TY
Sbjct: 529 GNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTY 588
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
Y D + + +M+ +K
Sbjct: 589 TTLMNGYCEEGDMHSMFDMLHEMEA-------------------------------KAIK 617
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+++ +YT+++ GLC++ + E+ Q M +GL P ++T+ T+ + ++ L+
Sbjct: 618 PTQI-----TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQ 672
Query: 278 TWRRLKKKLDEESI 291
+L ++ + S+
Sbjct: 673 KAFQLHNQMLQHSL 686
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 121/265 (45%), Gaps = 23/265 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + + SLIYG+CK ++ A + L + G+ P VTY L+NG C +H
Sbjct: 548 PTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMH----- 602
Query: 62 EKTIRNAEKVFD---EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+FD EM + I+P ++++V+ + + S+ L +M +G+ P
Sbjct: 603 --------SMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPD 654
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE---YRGRKDANGAMK 175
TY +V++ C ++ A +L +M+++ + PS TYN Y KDA+ +
Sbjct: 655 QITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDAD---R 711
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
L +++ + + + Y +I A + ++ + + + Y+ +I+ L
Sbjct: 712 LLVTLQDQSIRLTKV-AYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRL 770
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQK 260
C++ +A +F M+ G+ P +
Sbjct: 771 CKRNLITDAKFFFCMMLTHGIPPDQ 795
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 11/258 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P YT+L+ G+C+ + L EM + ++P +TY V++ G+C+ LH + +
Sbjct: 582 VPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQ 641
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K M RG+ PD +++ V+ + +AH Q + N M + + P+
Sbjct: 642 LLKY----------MYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPV 691
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC G ++DA+ LL + + + Y K + + D A+ + QM
Sbjct: 692 TYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQM 751
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E V +I Y+ +I N + + + + + D D ++++
Sbjct: 752 VERGFEV-SIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGD 810
Query: 241 WKEACQYFVEMIEKGLLP 258
+ F MI+ GLLP
Sbjct: 811 PNSVFEIFAMMIKCGLLP 828
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 4/227 (1%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ +A V +M+V ++ + +++ +L Y+ H + D N +K G+ T
Sbjct: 184 VHDALFVLAKMKVLNLQVSIATYNSLL--YNLRHT-DIMWDVYNEIKASGVPQNEYTNPI 240
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ LC R++DA L E PS ++N + + A + M +
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYG 300
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
L +P++++YNIL+ M+ E N ++ + D+ +Y +L +G A
Sbjct: 301 L-LPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ M+ GL P VT+ L G Q + +LK+K+ + +
Sbjct: 360 WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 101/254 (39%), Gaps = 36/254 (14%)
Query: 71 VFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK---GICPTVA------ 120
+FD +R G S+ IV HV +R + + LN M E+ G P++
Sbjct: 101 LFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNS 160
Query: 121 ----TYTSVVKCLCSCG-----RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
+VV + +C + DA +L +M + S TYN R +
Sbjct: 161 FRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLR---HTD 217
Query: 172 GAMKLYRQMKEDDLCVP-NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
+Y ++K VP N +T ILI +R+ G E G + S+
Sbjct: 218 IMWDVYNEIKASG--VPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNA 275
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
L+ G C+ A +F MI+ GLLP ++ L GL + + EE+
Sbjct: 276 LMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSM-----------EEA 324
Query: 291 ITFGSEFQNYHFKP 304
+ F ++ +N+ +P
Sbjct: 325 LEFTNDMENHGVEP 338
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 123/253 (48%), Gaps = 11/253 (4%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
+ +Y +I G+ K+ I A R ++IE+G+ P +VT+N L+ G C++ L
Sbjct: 507 IILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKL-------- 558
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
A K+ D ++V G+ P +++ +++ Y D L+ M+ K I PT TYT
Sbjct: 559 --AEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYT 616
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
VVK LC GR+ ++ +LL M G+ P TYN + + D A +L+ QM +
Sbjct: 617 VVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQH 676
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
L P+ TYN+LI + + ++ + L +YT +I C K +
Sbjct: 677 SL-QPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQN 735
Query: 244 ACQYFVEMIEKGL 256
A +F +M+E+G
Sbjct: 736 ALVFFHQMVERGF 748
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 19/270 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y L++G C ++ A F +M GVEP++VTYN+L NG R
Sbjct: 302 LPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGF----------R 351
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A KV M + G+ PD+ +++I++ + + + S M +G+ ++
Sbjct: 352 ILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIV 411
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ LC GRI++A LL EM G+ P TY+ R A++LY +M
Sbjct: 412 TYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEM 463
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ PN + +I + + ++ V S++ ++ Y ++I G +
Sbjct: 464 CSKRI-YPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGN 522
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA + + ++IEKG+ P VTF +L G
Sbjct: 523 IGEAVRSYKQIIEKGISPTIVTFNSLIYGF 552
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 121/265 (45%), Gaps = 23/265 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + + SLIYG+CK ++ A + L + G+ P VTY L+NG C +H
Sbjct: 540 PTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMH----- 594
Query: 62 EKTIRNAEKVFD---EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+FD EM + I+P ++++V+ + + S+ L +M +G+ P
Sbjct: 595 --------SMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPD 646
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE---YRGRKDANGAMK 175
TY +V++ C ++ A +L +M+++ + PS TYN Y KDA+ +
Sbjct: 647 QITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDAD---R 703
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
L +++ + + + Y +I A + ++ + + + Y+ +I+ L
Sbjct: 704 LLVTLQDQSIRLTKV-AYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRL 762
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQK 260
C++ +A +F M+ G+ P +
Sbjct: 763 CKRNLITDAKFFFCMMLTHGIPPDQ 787
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 11/258 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P YT+L+ G+C+ + L EM + ++P +TY V++ G+C+ LH + +
Sbjct: 574 VPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQ 633
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K M RG+ PD +++ V+ + +AH Q + N M + + P+
Sbjct: 634 LLKY----------MYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPV 683
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC G ++DA+ LL + + + Y K + + D A+ + QM
Sbjct: 684 TYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQM 743
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E V +I Y+ +I N + + + + + D D ++++
Sbjct: 744 VERGFEV-SIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGD 802
Query: 241 WKEACQYFVEMIEKGLLP 258
+ F MI+ GLLP
Sbjct: 803 PNSVFEIFAMMIKCGLLP 820
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 145/317 (45%), Gaps = 38/317 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YT LI G C++ I+ + + +M+ +G++ ++VTY VLL+ +C+
Sbjct: 373 PDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGR------- 425
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFS-------IVLH-------VYSRA---------- 97
I A + EM V G++PD+ ++S I L+ +Y +
Sbjct: 426 ---IDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGL 482
Query: 98 -HKPQLSLDKLNF--MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
K +S ++ F + + + + Y ++ G I +A +++ G+SP+
Sbjct: 483 FEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTI 542
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
T+N + + A+KL +K L VP TY L+ + M + ++ +
Sbjct: 543 VTFNSLIYGFCKKGKLAEAVKLLDTIKVHGL-VPTSVTYTTLMNGYCEEGDMHSMFDMLH 601
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
++ + +YT+++ GLC++ + E+ Q M +GL P ++T+ T+ + ++
Sbjct: 602 EMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAH 661
Query: 275 MLRTWRRLKKKLDEESI 291
L+ +L ++ + S+
Sbjct: 662 DLQKAFQLHNQMLQHSL 678
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 117/263 (44%), Gaps = 19/263 (7%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI G C+ +R+ A FL E P+VV++N L++G C+ S+ + F
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSF-------- 292
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
F M G+ PDV S++I+LH A + +L+ N M+ G+ P + TY +
Sbjct: 293 --FCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGF 350
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
G I A +++ M+ NG++P TY + + + KL +M L + +
Sbjct: 351 RILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKL-S 409
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
I TY +L+ R+D + + ++ L DL +Y+ + +EA + +
Sbjct: 410 IVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYE 461
Query: 250 EMIEKGLLPQKVTFETLYRGLIQ 272
EM K + P + GL +
Sbjct: 462 EMCSKRIYPNSFVCSAIISGLFE 484
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 4/227 (1%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ +A V +M+V ++ + +++ +L Y+ H + D N +K G+ T
Sbjct: 184 VHDALFVLAKMKVLNLQVSIATYNSLL--YNLRHT-DIMWDVYNEIKASGVPQNEYTNPI 240
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ LC R++DA L E PS ++N + + A + M +
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYG 300
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
L +P++++YNIL+ M+ E N ++ + D+ +Y +L +G A
Sbjct: 301 L-LPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ M+ GL P VT+ L G Q + +LK+K+ + +
Sbjct: 360 WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 101/254 (39%), Gaps = 36/254 (14%)
Query: 71 VFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK---GICPTVA------ 120
+FD +R G S+ IV HV +R + + LN M E+ G P++
Sbjct: 101 LFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNS 160
Query: 121 ----TYTSVVKCLCSCG-----RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
+VV + +C + DA +L +M + S TYN R +
Sbjct: 161 FRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLR---HTD 217
Query: 172 GAMKLYRQMKEDDLCVP-NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
+Y ++K VP N +T ILI +R+ G E G + S+
Sbjct: 218 IMWDVYNEIKASG--VPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNA 275
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
L+ G C+ A +F MI+ GLLP ++ L GL + + EE+
Sbjct: 276 LMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSM-----------EEA 324
Query: 291 ITFGSEFQNYHFKP 304
+ F ++ +N+ +P
Sbjct: 325 LEFTNDMENHGVEP 338
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 128/264 (48%), Gaps = 10/264 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V YT+LI + + + +++ L M + V P+++TYN ++N C R L +E
Sbjct: 177 SVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINS-CARGGLD----WE 231
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ +F EMR GI+PD+ +++ +L S + M E G+ P + TY
Sbjct: 232 GLL----GLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTY 287
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T +V R++ ELL EM G P +YN + Y + A ++R M+E
Sbjct: 288 TYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQE 347
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
CVPN TY+IL+G++ R D VRE++ +K S D +Y LI E +K
Sbjct: 348 AG-CVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFK 406
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
E F +M E+ + P T+E L
Sbjct: 407 EVVTLFHDMAEENVEPNMETYEGL 430
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 16/234 (6%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+PN Y ++++ + R E + +F+EM G+ V S++ +++ Y
Sbjct: 140 KPNEHIYTIMISLLGR----------EGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYG 189
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLG---EMVRNGVSP 152
R K ++SL+ L MK++ + P++ TY +V+ C+ G + D E LLG EM G+ P
Sbjct: 190 RNGKYEVSLELLERMKKERVSPSILTYNTVINS-CARGGL-DWEGLLGLFAEMRHEGIQP 247
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
TYN R + A ++R M E + VP+I TY L+ F LNR+D V E+
Sbjct: 248 DIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGV-VPDITTYTYLVDTFGKLNRLDKVSEL 306
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + ++ SY +L+ ++A F M E G +P T+ L
Sbjct: 307 LKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSIL 360
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 26/291 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---- 56
+P++ YT L+ + K+NR+D L EM G P + +YNVLL R ++
Sbjct: 281 VPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATG 340
Query: 57 -----------PNER--------FEKTIRNAE--KVFDEMRVRGIEPDVTSFSIVLHVYS 95
PN + K R E ++F EM+V EPD +++ ++ V+
Sbjct: 341 VFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFG 400
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + M E+ + P + TY ++ G +DA+++L M G+ PS++
Sbjct: 401 EGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSK 460
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
Y + Y A+ M E P I TYN LI MF I
Sbjct: 461 AYTGVIEAYGQAAMYEEALVTLNTMNEMG-SKPTIETYNTLIYMFARGGLYKETEAILLK 519
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + + DS+ +I G + +++EA + +VEM + L+P + T E +
Sbjct: 520 MGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAV 570
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 16/277 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLG---EMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
P++ Y ++I C +D E LG EM G++P++VTYN LL R
Sbjct: 211 PSILTYNTVINS-CARGGLDW-EGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRG----- 263
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
AE VF M G+ PD+T+++ ++ + + ++ + L M G P
Sbjct: 264 -----LGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPE 318
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+++Y +++ G IEDA + M G P+AETY+ Y + +L+
Sbjct: 319 ISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFL 378
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+MK + P+ TYN LI +F V +++ + + ++++Y LI +
Sbjct: 379 EMKVSN-TEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKG 437
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+A + + M EKG++P + + Q+ M
Sbjct: 438 GLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAM 474
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 131/301 (43%), Gaps = 16/301 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +LI + + +M E VEPN+ TY L+ C + LH +
Sbjct: 387 PDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIF-ACGKGGLHDD--- 442
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+K+ M +G+ P +++ V+ Y +A + +L LN M E G PT+ T
Sbjct: 443 ------AKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIET 496
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ G ++ E +L +M GV+ +++N + +R A+K Y +M+
Sbjct: 497 YNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEME 556
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L VP+ T ++ ++ +D E + +K S + ++ Y M++ + +W
Sbjct: 557 KSRL-VPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRW 615
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK---KKLDEESITFGSEFQ 298
EA + EM+ + +G D W+ ++ KL+ E G F
Sbjct: 616 NEAYELLDEMLTNRASNIHQVIGQMIKGDFDDD--SNWQMVEYVFDKLNSEGCGLGMRFY 673
Query: 299 N 299
N
Sbjct: 674 N 674
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 54/114 (47%)
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
S + FKE+ R D +++L++ M+ C PN H Y I+I + ++ +I
Sbjct: 106 SLNDFALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDI 165
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + + + SYT LI+ K++ + + M ++ + P +T+ T+
Sbjct: 166 FEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTV 219
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 14/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ +Y S+I CK + AE + ++ + G++P+ TY ++ G CR
Sbjct: 226 PNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCR---------- 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + +A ++F+ M G EP+ ++S +++ + + +LD ++ M G+ PTV T
Sbjct: 276 NRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHT 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+ + LC GRIEDA ++ +M + G P+ TY G++ + A+ L+ +M
Sbjct: 336 FTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLIS---GQRVSRMAIGLFHRMS 392
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + VPN TYN L+ + M +D ++N + + SY LI G C
Sbjct: 393 RDGV-VPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDT 451
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++A M++ P VT+ + +G S
Sbjct: 452 EKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDS 483
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 134/263 (50%), Gaps = 11/263 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y LI G+C I + A L M++ P +VTYN+++ G C
Sbjct: 432 LPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDV--- 488
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +V + M+ G +PD S++ ++ + + K +L+ N M ++G+CP
Sbjct: 489 -------AIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEV 541
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ C +++ A +L M R+G P+ +TYN + + +GA +L + M
Sbjct: 542 TYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 601
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E+ + P++ TY+ +I + + E++N + +L +Y+ LI L ++ +
Sbjct: 602 LEEKIS-PDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGR 660
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
+EA + F E+ ++GL+P +VT+
Sbjct: 661 VEEAEEMFSELKKQGLIPDEVTY 683
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 137/292 (46%), Gaps = 14/292 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V +T+ I C + RI+ A + +M ++G +PNV TY L++G
Sbjct: 330 LPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG------------ 377
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ R A +F M G+ P+ +++ +++V + +L N M + G P +
Sbjct: 378 -QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTS 436
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y +++ C+ G E A +L M++ +P+ TYN K Y D + A+++ M
Sbjct: 437 SYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELM 496
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + C P+ +Y LI F +++M++ ++N + L + +YT LI G C+ +K
Sbjct: 497 KANG-CQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEK 555
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + M G P T+ L GL + + L K + EE I+
Sbjct: 556 LDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKIS 607
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 141/310 (45%), Gaps = 29/310 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YTS+I G+C+ +D A M E G EPN TY+ L+NG+C ++ F
Sbjct: 261 PDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDF 320
Query: 62 --EKT-----------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E T I +A K+F +M+ +G +P+V +++ ++ S
Sbjct: 321 ISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLI---SG 377
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++++ + M G+ P TY +++ L I+ A + M ++G P+ +
Sbjct: 378 QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSS 437
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + Y D AM + M + P + TYNI+I + D+ + +
Sbjct: 438 YNELIRGYCTIGDTEKAMSMLTNMLKGRP-TPTLVTYNIIIKGYCDSGDTDVAIRVLELM 496
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K + D SYT LI G C+ K + A F EM+++GL P +VT+ L G + + L
Sbjct: 497 KANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKL 556
Query: 277 RTWRRLKKKL 286
R+ +++
Sbjct: 557 DCAARMLERM 566
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 132/296 (44%), Gaps = 29/296 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
PNV YTSLI G +++R MA M GV PN VTYN L+N + +
Sbjct: 366 PNVYTYTSLISGQ-RVSR--MAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIV 422
Query: 57 ----------PNE-------RFEKTIRNAEKVFDEMR--VRG-IEPDVTSFSIVLHVYSR 96
PN R TI + EK + ++G P + +++I++ Y
Sbjct: 423 FNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCD 482
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +++ L MK G P +YT ++ C ++E A + EM+ G+ P+ T
Sbjct: 483 SGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVT 542
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y Y + + A ++ +MK C PN+ TYN+LI N E+ +
Sbjct: 543 YTALISGYCKDEKLDCAARMLERMKRSG-CRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 601
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++ D+ +Y+ +I+GLC A + F +M++ G LP T+ +L + L Q
Sbjct: 602 LEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQ 657
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 129/307 (42%), Gaps = 59/307 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+LI G+CK ++D A R L M G PNV TYNVL++G+ +
Sbjct: 538 PNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTK---------- 587
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ AE++ M I PDV ++S V++ L+L+ N M + G P + T
Sbjct: 588 QNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHT 647
Query: 122 YTSVVKCLCSCGRIEDAEEL-----------------------------------LGEMV 146
Y+S+++ L GR+E+AEE+ LGEM+
Sbjct: 648 YSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMI 707
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G P+ +TY+ K + +Y ++ + +PN + + +
Sbjct: 708 NAGCQPTLQTYDVLIKGLQNE-------MVYHKL----VALPNAASTSTFDDQII---NK 753
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D++ + + + + L Y L+ L +W EA + M+ + P + T++
Sbjct: 754 DVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHF 813
Query: 267 YRGLIQS 273
L+++
Sbjct: 814 LISLLRA 820
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 141/328 (42%), Gaps = 70/328 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV+ Y LI+G K N AE M+E + P+VVTY+ ++NG+C +
Sbjct: 573 PNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGA------- 625
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A ++F++M G P++ ++S ++ + + + + + + +K++G+ P T
Sbjct: 626 ---IPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVT 682
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVS-------------------------PSAET 156
Y +++ G+++ A + LGEM+ G P+A +
Sbjct: 683 YVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAAS 742
Query: 157 YNCF---------------------FKEYRGRKDA-------NG----AMKLYRQMKEDD 184
+ F F+ R DA +G A LYR M
Sbjct: 743 TSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQS 802
Query: 185 LCVPNIHTY-NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
C PN TY + LI + AL ++D+ +++ H+ L L Y LI LC+ + KE
Sbjct: 803 QC-PNQDTYKHFLISLLRAL-KVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKE 860
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLI 271
A F +M+ + L ++ + L GL+
Sbjct: 861 ARFVFEKMLSRALNADEIVWTILINGLL 888
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
Query: 72 FDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCS 131
D RG + + +++ +L ++ + +D+ + + +G+ P + Y SV+ LC
Sbjct: 181 LDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCK 240
Query: 132 CGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIH 191
G + DAE ++ ++ ++G+ P TY Y +D + A +++ +M E+ C PN
Sbjct: 241 DGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEG-CEPNAA 299
Query: 192 TYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251
TY+ LI R++ + + + + + ++T I LC+ + ++A + F++M
Sbjct: 300 TYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDM 359
Query: 252 IEKGLLPQKVTFETLYRG 269
+KG P T+ +L G
Sbjct: 360 KKKGCKPNVYTYTSLISG 377
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 107/258 (41%), Gaps = 35/258 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---- 56
+P+ Y +I ++D A FLGEMI G +P + TY+VL+ G+ H
Sbjct: 677 IPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVA 736
Query: 57 -PNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
PN T FD+ + I DV S V S L +L+F + +
Sbjct: 737 LPNAASTST-------FDD---QIINKDVIS------VLSS------KLAELDFELSRQL 774
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
Y +++ L GR +A L MV P+ +TY F + AM
Sbjct: 775 ------YDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMD 828
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
+++ M D C ++ Y LI L+R R ++ + L D +T+LI+GL
Sbjct: 829 VFKHM-SDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGL 887
Query: 236 CEKQKWKEACQYFVEMIE 253
+K+ C F+ ++E
Sbjct: 888 L-GAGYKDLCMEFLHIME 904
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 1/161 (0%)
Query: 103 SLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
+L+ L+ ++G + TYT+++ L + +++R G+ P+ YN
Sbjct: 177 ALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVIN 236
Query: 163 EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222
+ A + ++ + + P+ TY +I + +D EI+N +
Sbjct: 237 ALCKDGNVRDAESIINKVFKSGM-KPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCE 295
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
+ +Y+ LI+GLC + EA + EM G+LP TF
Sbjct: 296 PNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTF 336
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY + + M Y Q+ + L PN+ YN +I + I N
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGL-QPNLLIYNSVINALCKDGNVRDAESIINK 253
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
V S + D +YT +I G C + A + F M E+G P T+ TL GL S
Sbjct: 254 VFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNS 311
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 142/294 (48%), Gaps = 29/294 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----RASLHP 57
PN +T+LI G C + A F ++ G + + V+Y +L+NG+C+ RA++
Sbjct: 78 PNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAM-- 135
Query: 58 NERFEKTIRNAE---------------------KVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ KT NA+ +++ EM +GI P+V +FSI++ +
Sbjct: 136 -QMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCK 194
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + +++ L M +KG+ P V TY +++ C ++ A + MV+ GV P+
Sbjct: 195 DRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWC 254
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN +K + AM L+++M + P++ TYNILI L ++ E+ + +
Sbjct: 255 YNIIINGLCKKKRVDEAMNLFKEMHWKKIN-PDVVTYNILIDGLCKLGKISTSLELVDEM 313
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ +D+ +Y L+H LC+ +A E+ ++G+ P T+ TL GL
Sbjct: 314 RSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGL 367
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 143/304 (47%), Gaps = 24/304 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV ++ L+ CK + A L M+++GV+PNVVTY +++G C
Sbjct: 180 PNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYC----------L 229
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +F+ M G+EP+V ++I+++ + + +++ M K I P V T
Sbjct: 230 VNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVT 289
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G+I + EL+ EM G + TYN + A+ L +++K
Sbjct: 290 YNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIK 349
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN+ TY LI R++ I+ + + + +Y ++I+GLC+K +
Sbjct: 350 DQGI-QPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLF 408
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRT------------WRRLKKKLDE 288
EA M + +P V++ET+ L + + ++T +RLKKK++
Sbjct: 409 DEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLKKKVNM 468
Query: 289 ESIT 292
+I
Sbjct: 469 TTIA 472
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 14/281 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ T L+ +C I L ++++ G EPN +T+ L+ G+C + F
Sbjct: 43 PSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLF 102
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
D + G + D S++I+++ + + + ++ L ++ + V
Sbjct: 103 H----------DHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQML---RKTWVNADVVM 149
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ LC + DA L EM+ G+ P+ T++ + AM L M
Sbjct: 150 YSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMM 209
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN+ TY ++ + +N+++ I+N + + ++ Y ++I+GLC+K++
Sbjct: 210 KKGV-KPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRV 268
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
EA F EM K + P VT+ L GL + + T L
Sbjct: 269 DEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLEL 309
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 95/224 (42%), Gaps = 9/224 (4%)
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
P + F+ +L + + ++ ++ GI P++ T T ++ C C G I +
Sbjct: 8 PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
L ++++ G P++ T+ K A A+ + + + + +Y IL+
Sbjct: 68 LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQV-SYAILMN--- 123
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
L +M R ++ + + D+ Y+ +I LC+ + +A + + EMI KG+ P
Sbjct: 124 GLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVY 183
Query: 262 TFETLYRGLIQS-----DMLRTWRRLKKKLDEESITFGSEFQNY 300
TF L L + M +KK + +T+G+ Y
Sbjct: 184 TFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGY 227
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 139/291 (47%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV +Y++LI G+ + D A + + EM GV+PN +TY+ L+ G+C+ +
Sbjct: 345 MPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMG---- 400
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++ +M G D ++++V+ + R H + + LN M++ GI P V
Sbjct: 401 ------RASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVY 454
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+ ++ LC G E A LL +M+ +G+ P+A Y Y + A + ++M
Sbjct: 455 TYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKM 514
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++L P+++ YN LI + +MD E ++ + + +Y LIHG
Sbjct: 515 TRENL-TPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGN 573
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++A Q +M+ GL P + + G +SD L K + E+ +
Sbjct: 574 LEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGL 624
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 132/294 (44%), Gaps = 26/294 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y++LI +CK+ ++ A++ + EM E G NVVTYN L+ G+CR ++ +
Sbjct: 241 PDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGY 300
Query: 62 EKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+K + + A+ + DEM G+ P+V +S ++ + R
Sbjct: 301 KKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMR 360
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + M G+ P TY ++++ LC GR+ A +L +M + G T
Sbjct: 361 QGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMT 420
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + + + A L +M++ + PN++TY+I+I + + + +
Sbjct: 421 YNLVIEGHLRQHNKEEAFLLLNEMRKGGIS-PNVYTYSIIINGLCQIGESERASGLLEQM 479
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
L + Y LI G C + + AC+ +M + L P + +L GL
Sbjct: 480 IADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGL 533
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 143/350 (40%), Gaps = 60/350 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P++ Y SLI G + ++D A + EM+E+G +PN TY L++G
Sbjct: 521 PDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQL 580
Query: 52 -----RASLHPNERFEKTI-------RNAEKV---FDEMRVRGIEPDVTSFSIVLHVYSR 96
+ L+PN+ I N EKV M +G+ PD + IV+H S
Sbjct: 581 LHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSS 640
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ Q ++ L+ +++ G+ P Y S++ C +E A LL EM + G+ P
Sbjct: 641 SGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISC 700
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + D + A ++ + L PN TY LI + + +++N +
Sbjct: 701 YNALIDGFCKSDDISHARNIFNSIICKGL-PPNCVTYTTLIDGYCKAGDIRDAIDLYNEM 759
Query: 217 KGSELGLD----------------------------------LDSYTMLIHGLCEKQKWK 242
+ D + S+ L+HG C++ K +
Sbjct: 760 LTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQ 819
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
E ++ M++K ++P +T E + GL ++ L + +L +++ +
Sbjct: 820 ETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNAS 869
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+ +I G C+I + A L +MI G++PN Y L++G CR
Sbjct: 451 PNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCR---------- 500
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A + +M + PD+ ++ ++ S K +++ + M EKG P T
Sbjct: 501 EGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFT 560
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ G +E AE+LL +M+ +G++P+ Y + Y + + M
Sbjct: 561 YGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSML 620
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L +P+ Y I+I + M + + ++ + L D Y LI G C+
Sbjct: 621 EKGL-MPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADM 679
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK-----KKLDEESITFGSE 296
++A EM +KG+ P + L G +SD + R + K L +T+ +
Sbjct: 680 EKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTL 739
Query: 297 FQNY 300
Y
Sbjct: 740 IDGY 743
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 11/245 (4%)
Query: 28 GEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSF 87
G M G+ P+V TY+ L+ C+ + + +A+KV +EMR G +V ++
Sbjct: 232 GFMEGAGISPDVYTYSTLIEAYCKV----------RDLESAKKVVEEMRETGCSLNVVTY 281
Query: 88 SIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147
+ ++ RA + + M++ G+ P TY +++ LC GR + A+ LL EM
Sbjct: 282 NTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSC 341
Query: 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
G+ P+ Y+ + + +A+ A K+ ++M + PN TY+ LI L RM
Sbjct: 342 AGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGV-QPNKITYDNLIRGLCKLGRMG 400
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
I + D +Y ++I G + +EA EM + G+ P T+ +
Sbjct: 401 RASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIII 460
Query: 268 RGLIQ 272
GL Q
Sbjct: 461 NGLCQ 465
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 126/292 (43%), Gaps = 10/292 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNV--LLNGV--CRRASLHP 57
P + L C A L +MI P +V +V L+G RR +
Sbjct: 118 PAPDAFAHLAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLSSVHRALSGSDQGRRPVVLD 177
Query: 58 N--ERFEKT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK 113
+ ++KT +R+ +V M+ G+ P + + +L RA L FM+
Sbjct: 178 VLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGA 237
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGA 173
GI P V TY+++++ C +E A++++ EM G S + TYN R A
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGL-CRAGAIEE 296
Query: 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
Y++ ED VP+ TY +I R D + + + + + L ++ Y+ LI
Sbjct: 297 AFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLID 356
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRTWRRLKK 284
G + EA + EM G+ P K+T++ L RGL + M R R LK+
Sbjct: 357 GFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQ 408
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 5/202 (2%)
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
KV M GI PDV ++S ++ Y + + + + M+E G V TY +++ L
Sbjct: 229 KVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGL 288
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYRQMKEDDLCV 187
C G IE+A EM G+ P TY RGR D A L +M L +
Sbjct: 289 CRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQ--AKCLLDEMSCAGL-M 345
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
PN+ Y+ LI FM D +I + + + + +Y LI GLC+ + A +
Sbjct: 346 PNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRI 405
Query: 248 FVEMIEKGLLPQKVTFETLYRG 269
+M + G + +T+ + G
Sbjct: 406 LKQMTKIGYMADTMTYNLVIEG 427
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 86/207 (41%), Gaps = 32/207 (15%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS---AETYNCFFKEYRGRKDA--- 170
P + + LC+ G A LL +M+R +P + + +GR+
Sbjct: 118 PAPDAFAHLAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLSSVHRALSGSDQGRRPVVLD 177
Query: 171 -------------NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
+GA ++ MK+ L P++ N L+ + + +D++ ++ ++
Sbjct: 178 VLVDTYKKTGRVRDGA-EVVLLMKDLGL-APSLRCCNGLLKDLLRADALDLLWKVRGFME 235
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
G+ + D+ +Y+ LI C+ + + A + EM E G VT+ TL GL ++ +
Sbjct: 236 GAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAI- 294
Query: 278 TWRRLKKKLDEESITFGSEFQNYHFKP 304
EE+ + E ++Y P
Sbjct: 295 ----------EEAFGYKKEMEDYGLVP 311
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 142/297 (47%), Gaps = 30/297 (10%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL---------- 55
MYT++I G+CK ++D A L EM ERGV+ +V+ ++ L+ G+CR+ +
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60
Query: 56 ----HPNERFEKTIRN----------AEKVFDEMRVR-----GIEPDVTSFSIVLHVYSR 96
PN T+ N ++FD+M R G EPDV S+S V+ +
Sbjct: 61 GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + + M+ G P V TY+S++ LC R+++A LL ++ + P A
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN ++ + + ++L MKE + NI +N ++ + + + + +
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGI-NIIDFNAMLHALWKNDEQEKACQFFERL 239
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
S ++ +Y + +HGLC+ K EA + +EM+E + P +T+ ++ G ++
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKA 296
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 131/298 (43%), Gaps = 30/298 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI G CK++R+D A L ++ + P + YN ++NG R+ P+E
Sbjct: 141 PNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGK--PSECL 198
Query: 62 EKTIRNAEK---------------------------VFDEMRVRGIEPDVTSFSIVLHVY 94
E + EK F+ + G +P+V ++++ +H
Sbjct: 199 ELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGL 258
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+A K + L M E + P V TY+S++ C GR++ A+++ M+ + P
Sbjct: 259 CKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHP 318
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
T+ + K + A +++ M +P + TYN+L+ + ++ EI++
Sbjct: 319 VTFMTLLHGFSEHKKSREAFRVHEDMVNAGF-IPGLQTYNVLMDCVCGADSVESALEIYH 377
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+K + D ++Y LI LC ++ EA ++ M ++P L L +
Sbjct: 378 KMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCK 435
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 132/288 (45%), Gaps = 15/288 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I CK R+D A + M G PNVVTY+ L++G+C+
Sbjct: 106 PDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKV--------- 156
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + +++ + P ++ V++ + R KP L+ L MKEKG +
Sbjct: 157 -DRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIID 215
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ L E A + ++++G P+ TYN + A ++ +M
Sbjct: 216 FNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMV 275
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + P++ TY+ +I F RMD +++ + E ++ L+HG E +K
Sbjct: 276 ESKV-TPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKS 334
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD----MLRTWRRLKKK 285
+EA + +M+ G +P T+ L + +D L + ++K+K
Sbjct: 335 REAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRK 382
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 27/273 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++G CK ++D A R L EM+E V P+V+TY+ +++G C+ R
Sbjct: 246 PNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG------RM 299
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K A+ VF M V P +F +LH +S K + + M G P + T
Sbjct: 300 DK----ADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQT 355
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C+C +E A E+ +M R P A TY + + + A + M+
Sbjct: 356 YNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVME 415
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D++ VPN + L+ + +D + ++V +C+ +
Sbjct: 416 ADNV-VPNGAICHALVEVLCKQGEVDEACSVLDNVV----------------EICKAGEP 458
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA + +M+ KG+ P + T+ + R L D
Sbjct: 459 DEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLD 491
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+V+ C G+++ A ELL EM GV ++ + + + A++ ++ M
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK-------GSELGLDLDSYTMLIHG 234
E+ C PN+ TYN ++ NR+D E+++ ++ G E D+ SY+ +I
Sbjct: 62 EE--CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEP--DVISYSTVIDA 117
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
LC+ Q+ +A +YF M G P VT+ +L GL + D + L +L E +
Sbjct: 118 LCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPR 177
Query: 295 SEFQNYHFKPYRR 307
+ + N ++R
Sbjct: 178 AMYYNAVVNGFKR 190
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI C+ R+D A+ FL M V PN + L+ +C++ +
Sbjct: 386 PDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSV 445
Query: 62 EKTI---------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
+ A +V ++M ++G+ PD ++ VL + ++ + M
Sbjct: 446 LDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMAS 505
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+G P + TYT ++ CS +DA + MV G +P A+T
Sbjct: 506 RGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQT 549
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 140/307 (45%), Gaps = 44/307 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V MY ++I+ CK + A EMI +G+ PNVVTYN L+ G C L
Sbjct: 201 PDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHL------ 254
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + +EM+++ I PDV +F+ ++ + K + + L M + I P V T
Sbjct: 255 ----KEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVT 310
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ ++++A+ + M ++GV+P+ TY K + AM L+ +MK
Sbjct: 311 YNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMK 370
Query: 182 E--------------DDLC--------------------VPNIHTYNILIGMFMALNRMD 207
D LC P++++Y IL+ R++
Sbjct: 371 YKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 430
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+E + + L++ +Y ++I+GLC+ + EA +M KG +P +TF+T+
Sbjct: 431 NAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTII 490
Query: 268 RGLIQSD 274
L + D
Sbjct: 491 CALFEKD 497
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 139/290 (47%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +LI G C I A F +++ +G + N V+Y L+NG+C+
Sbjct: 131 PNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGE------- 183
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ ++ ++ ++PDV ++ ++H + + D + M KGI P V T
Sbjct: 184 ---TKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V C G +++A LL EM ++P T+N + G++ A K+ +
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLI-DALGKEGKMKAAKIVLAVM 299
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
P++ TYN LI + LN++ + ++ + S + ++ +YT +I GLC+++
Sbjct: 300 MKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMV 359
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EA F EM K ++P VT+ +L GL ++ L L KK+ E+ I
Sbjct: 360 DEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI 409
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 153/347 (44%), Gaps = 67/347 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y SLI G+ +N++ A+ M + GV PNV TY +++G+C+
Sbjct: 306 PDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCK---------- 355
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + A +F+EM+ + + PD+ +++ ++ + H + ++ MKE+GI P V +
Sbjct: 356 EKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYS 415
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK------------EYRGRKD 169
YT ++ LC GR+E+A+E ++ G + +TYN + + + +
Sbjct: 416 YTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKME 475
Query: 170 ANGAM-----------------------KLYRQMKEDDL--------------------- 185
G M K+ R+M L
Sbjct: 476 GKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKA 535
Query: 186 CV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
C+ P++ TY L+ + +N + + ++ + + ++ YT++I GLC+K+ EA
Sbjct: 536 CIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEA 595
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
F EM K + P VT+ +L L ++ L L K++ E I
Sbjct: 596 MSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGI 642
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 138/321 (42%), Gaps = 49/321 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
P+V YT L+ CK R++ A+ F ++ +G NV TYNV++NG+C+
Sbjct: 411 PDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDL 470
Query: 53 ------ASLHPNERFEKTI----------RNAEKVFDEMRVRG----------------- 79
P+ KTI AEK+ EM RG
Sbjct: 471 KSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLA 530
Query: 80 ------IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
I+PDV ++ ++ Y ++ + + M + G+ P V YT ++ LC
Sbjct: 531 VMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKK 590
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
+++A L EM + P+ TY A+ L ++MKE + P++++Y
Sbjct: 591 TVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGI-QPDVYSY 649
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
IL+ R++ +EI+ + L++ YT +I+ LC+ + EA +M +
Sbjct: 650 TILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMED 709
Query: 254 KGLLPQKVTFETLYRGLIQSD 274
KG +P VTF+ + L + D
Sbjct: 710 KGCMPDAVTFDIIIWALFEKD 730
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV+ YT +I G CK +D A EM + + PN+VTY L++ +C+ N
Sbjct: 574 PNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCK------NHHL 627
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ I + EM+ GI+PDV S++I+L ++ + + + + + KG V
Sbjct: 628 ERAI----ALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQV 683
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT+++ LC G ++A +L +M G P A T++ + + + A K+ +M
Sbjct: 684 YTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEM 742
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 10/149 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YTSLI CK + ++ A L EM E G++P+V +Y +LL+G+C+ L
Sbjct: 609 PNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRL------ 662
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+++F + V+G +V ++ +++ +A +LD M++KG P T
Sbjct: 663 ----EGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVT 718
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+ ++ L + AE++L EM+ G+
Sbjct: 719 FDIIIWALFEKDENDKAEKILXEMIARGL 747
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 3/204 (1%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLH-VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A FD M + P F+ +L + + H P + + + G P + T ++
Sbjct: 47 AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTV-ISLFKKFESNGATPDLCTLNILM 105
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C C I A +L +++ G P+A T N K R + A+ + Q+
Sbjct: 106 NCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQ 165
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+ + +Y LI V + ++G + D+ Y +IH LC+ + +AC
Sbjct: 166 LNQV-SYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACD 224
Query: 247 YFVEMIEKGLLPQKVTFETLYRGL 270
+ EMI KG+ P VT+ L G
Sbjct: 225 LYSEMIVKGISPNVVTYNALVYGF 248
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 126/244 (51%), Gaps = 11/244 (4%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82
A + + M+ +G+E + +TYN+++ G C+ + + E+ I K+ +M RG +P
Sbjct: 258 ATKVIQTMLNKGIELDSITYNIMIRGCCK------DSKMEEAI----KLHGDMTRRGFKP 307
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
D+ +F+ +LH Y K + + L+ MK +G+ P + +Y +++ C I A+E L
Sbjct: 308 DLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYL 367
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
E++ G+ P+ YN Y D +GA+ MK + + N+ TY L+
Sbjct: 368 TELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNV-TYGSLMYWMCH 426
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
++ + I++ + + + L + YT++I G C+ K EA YF EM +G+ P K+T
Sbjct: 427 AGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLT 486
Query: 263 FETL 266
+ TL
Sbjct: 487 YTTL 490
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 130/283 (45%), Gaps = 29/283 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y L+ CK R++ A R G M + G+ P+VVT+ +L+NG+ R ERF
Sbjct: 44 PTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLAR------GERF 97
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ V EM G+ P+ ++ ++ + R +L + M K + PT T
Sbjct: 98 GE----VGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVT 153
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN---CFFKEYRGRKDANGAMK--- 175
Y + K LC G +E AE +L +M+ G++ +N + + R ++ ++
Sbjct: 154 YNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEM 213
Query: 176 LYRQMKEDD---------LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS-ELGLDL 225
+ R M+ +D LC H + I F LN+ ++E ++ G++L
Sbjct: 214 VTRGMRPNDPLMTACMRELCKGGKHQEAVGI-WFKTLNKGKYMKEATKVIQTMLNKGIEL 272
Query: 226 DS--YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
DS Y ++I G C+ K +EA + +M +G P TF TL
Sbjct: 273 DSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTL 315
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 128/287 (44%), Gaps = 31/287 (10%)
Query: 2 PNVKMYTSLIYGW-CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
PN +Y LI GW C+ A R EM+ + ++P VTYN++ +C+
Sbjct: 114 PNEVIYNELI-GWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCK--------- 163
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSF-SIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
E + AE++ ++M G+ F ++V + R + + + N M +G+ P
Sbjct: 164 -EGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPND 222
Query: 120 ATYTSVVKCLCSCGR-----------------IEDAEELLGEMVRNGVSPSAETYNCFFK 162
T+ ++ LC G+ +++A +++ M+ G+ + TYN +
Sbjct: 223 PLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIR 282
Query: 163 EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222
A+KL+ M P++ T+N L+ + L +M+ + + +K L
Sbjct: 283 GCCKDSKMEEAIKLHGDMTRRGF-KPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQ 341
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
D+ SY +I G C+ + ++A +Y E++++GL P + L G
Sbjct: 342 PDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGG 388
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++I G CK I A+ +L E+++RG++PNV YN L+ G R
Sbjct: 342 PDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGD------- 394
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + M+ GI+P ++ +++ A + + + +E + V
Sbjct: 395 ---ISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIG 451
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ C G++ +A EM G+SP+ TY Y ++ A KL+ +M
Sbjct: 452 YTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMV 511
Query: 182 EDDLCVPNIHTYNILIG 198
+ +P+ TY LI
Sbjct: 512 GSGV-IPDNITYGTLIA 527
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 1/195 (0%)
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
R + + S++ ++ +A K + L + G+ PTV TY ++ LC GR+E+
Sbjct: 5 RNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEE 64
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A L G M + G++PS T+ R + G + + Q E PN YN LI
Sbjct: 65 AFRLKGRMEQGGMTPSVVTFGILINGL-ARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 123
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
G +++ + ++ +Y ++ LC++ + + A + +M+ G+
Sbjct: 124 GWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMT 183
Query: 258 PQKVTFETLYRGLIQ 272
F T+ L+Q
Sbjct: 184 VHCGLFNTVVAWLLQ 198
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 139/281 (49%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +++LI K ++ A+ EMI RG+EPN +TYN L+ G+C
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCN---------- 382
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K + A ++ D M +G +PD+ +++I+++ + +A + + M +G+ T
Sbjct: 383 DKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVT 442
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+++++ C ++ A+++ EMV GV P TY + A+ + QM
Sbjct: 443 YSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMH 502
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + +I YNI+I N++D ++ + + D+ SY +++ GLC++
Sbjct: 503 KCKMEL-DIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSL 561
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
EA F +M E G P T+ TL R ++ + + T +L
Sbjct: 562 SEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQL 602
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 141/294 (47%), Gaps = 11/294 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ +++ G C +R+ A + M+ G +PN TY +LN +C+ +
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGN------ 245
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A + +M R I+P V +++I++ + + +L + M+ KGI V
Sbjct: 246 ----TASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVF 301
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S++ CS GR +D +LL +M+ ++P+ T++ A LY +M
Sbjct: 302 TYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEM 361
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ PN TYN LI R+D ++ + + D+ +Y +LI+G C+ ++
Sbjct: 362 ITRGI-EPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQ 420
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
+ + F +M +G++ VT+ TL +G QS L +++ +++ + + G
Sbjct: 421 VDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPG 474
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 136/322 (42%), Gaps = 44/322 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT +I CK R+D A F EM +G++ NV TYN L+ C R+
Sbjct: 263 PHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFG------RW 316
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + ++ +M R I P+V +FS ++ + K + D N M +GI P T
Sbjct: 317 D----DGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTIT 372
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC+ R+++A +++ MV G P TYN + K + M+L+R+M
Sbjct: 373 YNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMS 432
Query: 182 EDDLCV----------------------------------PNIHTYNILIGMFMALNRMD 207
+ P I TY IL+ ++
Sbjct: 433 LRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELE 492
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
I + + ++ LD+ Y ++IHG+C K +A F + KG+ ++ +
Sbjct: 493 EALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIML 552
Query: 268 RGLIQSDMLRTWRRLKKKLDEE 289
GL + L L +K+ E+
Sbjct: 553 SGLCKRSSLSEADALFRKMKED 574
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 151/323 (46%), Gaps = 35/323 (10%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA--------------SL 55
+I +C+ ++ A +G++ + G EPN VT+N LLNG+C S
Sbjct: 131 MINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQ 190
Query: 56 H-PNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL 104
H P+ TI N A + M G +P+ ++ +L+ ++ +L
Sbjct: 191 HVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASAL 250
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
D L M+ + I P V TYT ++ LC GR++DA EM G+ + TYN +
Sbjct: 251 DLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSF 310
Query: 165 --RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222
GR D +GA +L R M + PN+ T++ LI + ++ ++++N + +
Sbjct: 311 CSFGRWD-DGA-QLLRDMITRKI-TPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIE 367
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRT 278
+ +Y LI+GLC ++ EA Q M+ KG P T+ L G ++ D +R
Sbjct: 368 PNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRL 427
Query: 279 WRRLK-KKLDEESITFGSEFQNY 300
+R++ + + +++T+ + Q +
Sbjct: 428 FRKMSLRGMIADTVTYSTLIQGF 450
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 128/269 (47%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ CK A L +M R ++P+VVTY ++++ +C+ L
Sbjct: 228 PNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLD----- 282
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A F EM +GI+ +V +++ ++ + + L M + I P V T
Sbjct: 283 -----DALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVT 337
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++++ L G++ +A++L EM+ G+ P+ TYN K + A ++ M
Sbjct: 338 FSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMV 397
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P+I TYNILI F ++D ++ + + D +Y+ LI G C+ +K
Sbjct: 398 SKG-CDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKL 456
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A + F EM+ +G+ P +T+ L GL
Sbjct: 457 IVAKKVFQEMVSQGVHPGIMTYAILLDGL 485
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 87/175 (49%), Gaps = 10/175 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y++LI G+C+ ++ +A++ EM+ +GV P ++TY +LL+G+C L
Sbjct: 443 YSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELE---------- 492
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + D+M +E D+ ++I++H A+K + + KG+ + +Y ++
Sbjct: 493 EALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIML 552
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
LC + +A+ L +M +G P TYN + + D +++L +MK
Sbjct: 553 SGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMK 607
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 40/258 (15%)
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
+M ++GI D+ + +I+++ + R K + + + + G P T+ +++ LC G
Sbjct: 115 QMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEG 174
Query: 134 RIEDAEE-----------------------------------LLGEMVRNGVSPSAETYN 158
R+ +A E L+ M+ NG P+ TY
Sbjct: 175 RVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYG 234
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
+ A+ L R+M+ + P++ TY I+I R+D ++ ++
Sbjct: 235 PILNRMCKSGNTASALDLLRKMEHRKI-KPHVVTYTIIIDNLCKDGRLDDALSFFSEMET 293
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
+ ++ +Y LI C +W + Q +MI + + P VTF L L++ L
Sbjct: 294 KGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTE 353
Query: 279 WRRLKKKLDEESITFGSE 296
K L E IT G E
Sbjct: 354 ----AKDLYNEMITRGIE 367
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++ +Y +I+G C N++D A + +GV+ ++ +YN++L+G+C+R+SL
Sbjct: 509 DIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLS------ 562
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A+ +F +M+ G EPD +++ ++ + R + S+ + MK G +T
Sbjct: 563 ----EADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTV 618
Query: 123 TSVVKCLCS 131
V+ L S
Sbjct: 619 KIVMDMLSS 627
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 89/235 (37%), Gaps = 36/235 (15%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A +F M P V F+ + + +R + L L M+ KGI + T ++
Sbjct: 73 DAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMI 132
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE--YRGR----------------- 167
C C ++ A +G++ + G P+ T+N GR
Sbjct: 133 NCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHV 192
Query: 168 ---------------KD-ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
KD + A+ L +M + C PN TY ++ +
Sbjct: 193 PDLITLNTIVNGLCLKDRVSEAVDLIARMMANG-CQPNQFTYGPILNRMCKSGNTASALD 251
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ ++ + +YT++I LC+ + +A +F EM KG+ T+ +L
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSL 306
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%)
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+P + +N L G+ + D+V + ++ + DL + ++I+ C ++K A
Sbjct: 87 LPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFS 146
Query: 247 YFVEMIEKGLLPQKVTFETLYRGL 270
++ + G P VTF TL GL
Sbjct: 147 AMGKIFKLGYEPNTVTFNTLLNGL 170
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 142/295 (48%), Gaps = 17/295 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + S+I G CK +++ AE + MIE+GV+P+V+TYN++++G R
Sbjct: 281 PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQ------- 333
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++FD M + IEPD+ S++I+++ Y+R K ++ + +KG+ P++ T
Sbjct: 334 ---VDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVT 390
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
++ L GR + A+ EM+ G P T+ Y AM + ++
Sbjct: 391 CNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLE 450
Query: 181 --KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ED NI Y +I ++D + + L D+ +YT +I G C++
Sbjct: 451 RRRED----TNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE 506
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
EA +M + G L T+ + RG ++S+ + + +++ +S +F
Sbjct: 507 GLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSF 561
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 138/294 (46%), Gaps = 15/294 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN MY +++ G CK A L M + +PN TY ++++ C+ L
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLD----- 230
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +EM+ + I PD+ ++S ++ + + + M I P V T
Sbjct: 231 -----GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCT 285
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ SV+ LC G++EDAEE++ M+ GV P TYN Y R + A +++ M
Sbjct: 286 FNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMI 345
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I +YNILI + ++D ++ + L + + +L+HGL E +
Sbjct: 346 NKSI-EPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRT 404
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM----LRTWRRLKKKLDEESI 291
K A +F EM+ G +P T TL G ++ + + + +L+++ ++ +I
Sbjct: 405 KSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNI 458
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGV-EPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+T+LI G N++ A +++ + EPN V Y ++NG+C++
Sbjct: 145 FTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKG------------ 192
Query: 66 RNAEKVFDEMRVR---GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ +K FD +R+ +P+ +++IV+ + + + LN MK+K I P + TY
Sbjct: 193 -HTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTY 251
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++++ LC + E+ L EM+ + P+ T+N A ++ R M E
Sbjct: 252 STLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIE 311
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ P++ TYN++I + ++D REI++ + + D+ SY +LI+G ++K
Sbjct: 312 KGV-DPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKID 370
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA Q E+ +KGL P VT L GL +
Sbjct: 371 EAMQVCREISQKGLKPSIVTCNVLLHGLFE 400
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 145/322 (45%), Gaps = 46/322 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + YT +I +CK +D A L EM ++ + P++ TY+ L++ +C+ +
Sbjct: 211 PNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQW------ 264
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
N +F EM I P+V +F+ V+ + K + + + + +M EKG+ P V T
Sbjct: 265 ----ENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVIT 320
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ G+++ A E+ M+ + P +YN Y +K + AM++ R++
Sbjct: 321 YNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREIS 380
Query: 182 EDDLCVPNIHTYNILI-GMF------MALNRMD-------------------------MV 209
+ L P+I T N+L+ G+F A N D +V
Sbjct: 381 QKGL-KPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLV 439
Query: 210 REIWNHVKGSEL---GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
E +H E ++ YT +I GLC+ K +A F ++ GL P +T+ +
Sbjct: 440 EEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAM 499
Query: 267 YRGLIQSDMLRTWRRLKKKLDE 288
G Q +L + + +K+++
Sbjct: 500 ISGYCQEGLLDEAKDMLRKMED 521
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 116/262 (44%), Gaps = 28/262 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNG------------V 49
P+V Y +I G+ ++D A MI + +EP++++YN+L+NG V
Sbjct: 316 PDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQV 375
Query: 50 CRRAS--------------LHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
CR S LH +T ++A+ FDEM G PD+ + +L Y
Sbjct: 376 CREISQKGLKPSIVTCNVLLHGLFELGRT-KSAQNFFDEMLSAGHIPDLYTHCTLLGGYF 434
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + ++ + ++ + + YT+V+ LC G+++ A ++ G+ P
Sbjct: 435 KNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVI 494
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY Y + A + R+M ED+ C+ + TYN+++ F+ N++ ++
Sbjct: 495 TYTAMISGYCQEGLLDEAKDMLRKM-EDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEE 553
Query: 216 VKGSELGLDLDSYTMLIHGLCE 237
+ G + + +L+ + E
Sbjct: 554 IAGKSFSFEAATVELLMDIIAE 575
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 122/290 (42%), Gaps = 17/290 (5%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+D A +M+ P+V +++ LL +A +H K + +F E+
Sbjct: 53 LDDAFSLFRQMVRTKPLPSVASFSKLL-----KAMVH-----MKHYSSVVSLFREIHKLR 102
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
I SIV++ H+ L L +KGI T+T++++ L + +++DA
Sbjct: 103 IPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAV 162
Query: 140 ELLGEMVRNGV-SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L ++VR + P+ Y + A L R M++ PN TY I+I
Sbjct: 163 HLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGS-TKPNTRTYTIVID 221
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
F +D + N +K + D+ +Y+ LI LC+ +W+ F+EMI + P
Sbjct: 222 AFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYP 281
Query: 259 QKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGSEFQNYHFK 303
TF ++ GL + + ++K +D + IT+ Y +
Sbjct: 282 NVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLR 331
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 136/287 (47%), Gaps = 11/287 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV ++ LI G CK + A EM +RG+ P+ TY V+++G+CR
Sbjct: 193 LPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCR--------- 243
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K + +A ++FD+M+ G+ PD + + +L+ + + + L ++ G V
Sbjct: 244 -SKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVR 302
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y+ +++ L R ED + L +M+ + V P Y K A++L +M
Sbjct: 303 GYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEM 362
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + VP+ YN+LI F + + R + + + ++ +Y++LI G+C
Sbjct: 363 TESGV-VPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGL 421
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
++A + F EM + G P VTF +L GL ++ L L K++
Sbjct: 422 TRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKME 468
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 13/275 (4%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI + K+ D A G M + P+V TYN++L+ + ++ L A
Sbjct: 132 LIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLL----------AL 181
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
V+ M P+V +FSI++ ++ + +L + M ++GI P TY V+ L
Sbjct: 182 TVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGL 241
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C R++DA L +M +GV P T N + + A L R ++D V +
Sbjct: 242 CRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGY-VLD 300
Query: 190 IHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
+ Y+ LI G+F A R + V+ ++ + + D+ YT+++ GL E K ++A +
Sbjct: 301 VRGYSCLIRGLFRA-KRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELL 359
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
EM E G++P V + L +G +L R L+
Sbjct: 360 NEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQ 394
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 34/283 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT ++ G + ++ A L EM E GV P+ V YNVL+ G C L
Sbjct: 334 PDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSL 393
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I + P+V ++SI++ R + + + N M++ G P+ T
Sbjct: 394 QLEISRHDCF----------PNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVT 443
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK---DANGAMKLYR 178
+ S++ LC G++E A L +M G +PS F + +G D+ K+
Sbjct: 444 FNSLIDGLCKTGQLEKAHLLFYKM-EIGRNPSL-----FLRLSQGPSHVLDSASLQKMVE 497
Query: 179 QMKEDDLC---------------VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223
Q+ + L P I+TYNIL+ F L + +++ ++ L
Sbjct: 498 QLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSP 557
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D +Y LI+GL Q+ ++A + F +M + G P + T+
Sbjct: 558 DTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTM 600
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 142/347 (40%), Gaps = 78/347 (22%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +I G C+ R+D A R +M + GV P+ VT N LLNG C + +E
Sbjct: 228 LPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRV--DEA 285
Query: 61 FE---------------------------KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
F K + + ++ +M ++PDV ++I++
Sbjct: 286 FSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKG 345
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ A K + +L+ LN M E G+ P Y ++K C G + +A L E+ R+ P+
Sbjct: 346 LAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPN 405
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI---------------- 197
+TY+ A +++ +M++ C P+ T+N LI
Sbjct: 406 VKTYSILISGMCRNGLTRDAQEIFNEMEKLG-CYPSAVTFNSLIDGLCKTGQLEKAHLLF 464
Query: 198 ---------GMFMALNR-----------MDMVREIWN------------HVKGSELGLDL 225
+F+ L++ MV ++ + + S +
Sbjct: 465 YKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGI 524
Query: 226 DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+Y +L++G C+ + A + F EM KGL P VT+ TL GL++
Sbjct: 525 YTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLR 571
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A + F MR PDV +++++L V + + L+L M + P VAT++ ++
Sbjct: 145 AMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILID 204
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
LC G ++DA L EM + G+ P A TY K + A +L+ +MK+ +
Sbjct: 205 GLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVG- 263
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
P+ T N L+ F L+R+D + + LD+ Y+ LI GL +++++
Sbjct: 264 PDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLL 323
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ +MIE + P + + +GL ++ +R L ++ E +
Sbjct: 324 YRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVV 368
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 107/246 (43%), Gaps = 18/246 (7%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
C I A R L ++ + G P + TYN+L+NG C+ + + A K+F E
Sbjct: 500 CDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFN----------GAYKLFRE 549
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
M+ +G+ PD ++ +++ R + + + + M++ G P A Y +++ +C
Sbjct: 550 MQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRME 609
Query: 135 IEDAEELLGEMVRNGVSPSAETYNC---FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIH 191
+ A L + +RN S E +F++ K G +++ ++ + DL
Sbjct: 610 LPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDL-----G 664
Query: 192 TYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251
Y I + R+ +I+ ++ ++ + LI+ L ++ A F+
Sbjct: 665 PYAIWLIGLCQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYT 724
Query: 252 IEKGLL 257
IEKG L
Sbjct: 725 IEKGYL 730
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 3/175 (1%)
Query: 101 QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
+L L +K GI + ++K G + A E G M +P TYN
Sbjct: 108 ELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMI 167
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGS 219
+ A+ +Y +M + + C+PN+ T++ILI G+ + N D + +++ +
Sbjct: 168 LDVLIQKNFLLLALTVYTRMMKLN-CLPNVATFSILIDGLCKSGNVKDAL-HLFDEMTQR 225
Query: 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ D +Y ++I GLC ++ +A + F +M + G+ P VT L G D
Sbjct: 226 GILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLD 280
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 139/289 (48%), Gaps = 11/289 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V YT L+ G CK+ R+ AE LGEM+ +GV PNVVTYN L+ G+C+ RF
Sbjct: 194 PGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEG------RF 247
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + K+ ++M ++ PD +++ V+H + K L+ KG+ V T
Sbjct: 248 D----DVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLT 303
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C G ++ A ++L M RN V+P +T+N + + AM QM
Sbjct: 304 YNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMA 363
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L PN T+N LI ++ + + + ++ + D +Y + I LC++ +
Sbjct: 364 GAGL-SPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQL 422
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+EA F + KG+ V + +L G Q + + L +K+ E+
Sbjct: 423 EEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASEN 471
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 129/291 (44%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +LI G C+ R D + L +M + P+ TY +++G+C+
Sbjct: 228 VPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGK------ 281
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + KV E +G+ +V +++ +++ Y + + +LD L MK + P V
Sbjct: 282 ----VGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQ 337
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ V+ C G++ A L +M G+SP+ T+N + A++L M
Sbjct: 338 TFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLM 397
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+E + +P+ TY I I +++ +++ + + YT L+HG C+
Sbjct: 398 EEYGV-LPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGD 456
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A +M + +P T+ TL GL + L L K+ ++ I
Sbjct: 457 IDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGI 507
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 29/290 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V Y +LI G CK+ R+D A L +M ++G+EP T+N+L+ +
Sbjct: 473 MPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQM----------L 522
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV--YSRAHKPQLSLDKLNFMKEKGICPT 118
++K +A K++++M G +PD ++++ + + A K + + M E G+ P
Sbjct: 523 WDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPD 582
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM---- 174
V TY +++K G E A +M+ + P TY+ Y KD + A
Sbjct: 583 VETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLN-YMCNKDDSDAFDNEK 641
Query: 175 -----------KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223
+L+ QM E D P I TY L+ R++ V + ++G+ + L
Sbjct: 642 IWKMVDVRNLQELFEQMCESD-AAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILL 700
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
D D L+ C + ++EAC+ F M + P + L GL S
Sbjct: 701 DEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDS 750
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 154/381 (40%), Gaps = 79/381 (20%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----RRASLH- 56
P V+ + +I+G+C ++ A FL +M G+ PN VT+N L++G C R+ +L
Sbjct: 334 PGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRL 393
Query: 57 ----------PNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P+ + E + A +F + ++GI+ ++ ++H Y +
Sbjct: 394 LDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQ 453
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + M + P V TY +++ LC R++ A +LL +M + G+ P+ T
Sbjct: 454 VGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCT 513
Query: 157 YNCFFKEYRGRKDANGAMKLYRQM-------------------------KEDDL------ 185
+N K+ K A K+Y QM KE+++
Sbjct: 514 FNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVE 573
Query: 186 -----CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLCEK 238
P++ TYN +I ++ + + + HVK + +D D +Y++L++ +C K
Sbjct: 574 MHEAGVFPDVETYNAIIKAYVDAGLKE--KAFFAHVKMLSVPIDPDCTTYSILLNYMCNK 631
Query: 239 QK---------WK-----EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
WK + F +M E P T++ L RGL L L
Sbjct: 632 DDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLL 691
Query: 285 KLDEESITFGSEFQNYHFKPY 305
K+ SI + +Y Y
Sbjct: 692 KMQGNSILLDEDMSDYLLGCY 712
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 105/244 (43%), Gaps = 12/244 (4%)
Query: 27 LGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTS 86
G M++ G PN TYN L+N C+ A L +R A G+ PD +
Sbjct: 78 FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREA----------GLAPDTFT 127
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEK-GICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
++ ++ RA + M + G C +YT ++K LC+ GRI+DA + +M
Sbjct: 128 YNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKM 187
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
R P TY + A L +M + VPN+ TYN LIG R
Sbjct: 188 SRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGV-VPNVVTYNALIGGLCQEGR 246
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
D V ++ ++ D +YT ++HGLC+ K + E I KG+ + +T+
Sbjct: 247 FDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNA 306
Query: 266 LYRG 269
L G
Sbjct: 307 LING 310
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 124/295 (42%), Gaps = 29/295 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN--- 58
PN Y +LI CK+ + A L M E G+ P+ TYN L+ G+CR L
Sbjct: 88 PNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGL 147
Query: 59 ------------ERFEKTI-----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+R+ TI +A +VF +M P V +++++L
Sbjct: 148 FVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLC 207
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + L M KG+ P V TY +++ LC GR +D +LL +M SP
Sbjct: 208 KVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCW 267
Query: 156 TYNCFFKEY-RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TY + K +GA L+ + + + TYN LI + M ++
Sbjct: 268 TYTQVVHGLCKHGKVGHGAKVLHEAIGKG--VALEVLTYNALINGYCKGGDMKAALDVLQ 325
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+K + + + ++ +IHG C K +A + +M GL P VTF +L G
Sbjct: 326 LMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISG 380
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 4/209 (1%)
Query: 83 DVTSFSIVLHVYSR--AHKPQLS--LDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
DV S + L YS + P+L+ L M + G P TY +++ C + DA
Sbjct: 50 DVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADA 109
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L M G++P TYNC A L+ QM + ++Y ILI
Sbjct: 110 RAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIK 169
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
A R+D ++ + + +YT+L+ GLC+ ++ EA EM+ KG++P
Sbjct: 170 GLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVP 229
Query: 259 QKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
VT+ L GL Q +L +K++
Sbjct: 230 NVVTYNALIGGLCQEGRFDDVTKLLEKME 258
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 136/269 (50%), Gaps = 15/269 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV++Y LI G C +I+ A RF EM ++G+E N+VTYN L++G+ L
Sbjct: 900 PNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLA----- 954
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE + E+ +G++PDV +++ ++ Y A Q + MK GI PT+ T
Sbjct: 955 -----EAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKT 1009
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC+ IE +++ GEM + P YN Y D + A L +QM
Sbjct: 1010 YHLLIS-LCTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMI 1065
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + + TYN LI + + ++ VR + + +K E+ + D+Y +++ G CE + +
Sbjct: 1066 EKSIGLDKT-TYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDY 1124
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A ++ EM EKGLL + L GL
Sbjct: 1125 MGAYVWYREMQEKGLLLDVCIGDELVSGL 1153
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 11/292 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y +LI G+CK + + + M +EP+++T+N LL G+ +
Sbjct: 619 LPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAG------- 671
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +AE V EM+ +G PD +FSI+ YS K +L + G+
Sbjct: 672 ---MVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAY 728
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T + ++ LC G+IE AEE+LG + G+ P+ YN Y + D GA M
Sbjct: 729 TCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAM 788
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + P+ YN LI F L M+ + N +K + +++Y +LI G K +
Sbjct: 789 EKQGM-KPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYE 847
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ + EM + G +P V++ TL L + L + +K+ +++ ++
Sbjct: 848 FDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVS 899
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 148/309 (47%), Gaps = 20/309 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ ++ L G+ ++ D A ++ G++ N T ++LLN +C+
Sbjct: 689 VPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCK--------- 739
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I AE++ +G+ P+ ++ ++ YSR + K++ M+++G+ P
Sbjct: 740 -EGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHL 798
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C G +E+AE+ + +M GVSPS ETYN Y + + + L ++M
Sbjct: 799 AYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEM 858
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
ED+ +PN+ +Y LI +++ + + ++ + ++ Y MLI G C K K
Sbjct: 859 -EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGK 917
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-------DMLRTWRRLKKKLDEESITF 293
++A ++ EM +KG+ VT+ TL GL + DML R K L + T+
Sbjct: 918 IEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISR--KGLKPDVFTY 975
Query: 294 GSEFQNYHF 302
S Y F
Sbjct: 976 NSLISGYRF 984
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 11/267 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ MY I K++ + M + P V YNVL++G+C+
Sbjct: 550 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKV--------- 600
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +++AE++FDEM R + P + +++ ++ Y + P+ S MK I P++ T
Sbjct: 601 -RQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLIT 659
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++K L G +EDAE +L EM G P A T++ F Y A+ A+ +Y
Sbjct: 660 FNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAV 719
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L + N +T +IL+ +++ EI L + Y +I G K
Sbjct: 720 DSGLKM-NAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDL 778
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYR 268
A M ++G+ P + + L R
Sbjct: 779 VGARMKIDAMEKQGMKPDHLAYNCLIR 805
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 15/281 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ Y LI G+ + D L EM + G PNVV+Y L+N +C+ + L
Sbjct: 830 PSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKL------ 883
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ V +M RG+ P+V +++++ K + + M +KGI + T
Sbjct: 884 ----LEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVT 939
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ L G++ +AE++L E+ R G+ P TYN YR + + LY +MK
Sbjct: 940 YNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMK 999
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P + TY++LI + +++ ++I+ + L DL Y ++H
Sbjct: 1000 TSGI-KPTLKTYHLLISLCTK-EGIELTKKIFGEMS---LQPDLLVYNGVLHCYAVHGDM 1054
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+A +MIEK + K T+ +L G ++ L R L
Sbjct: 1055 DKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 1095
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 26/282 (9%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-------------- 55
L+ CK +I+ AE LG + +G+ PN V YN +++G R+ L
Sbjct: 733 LLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQG 792
Query: 56 -HPNE-RFEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL 104
P+ + IR NAE+ ++M+++G+ P V +++I++ Y R ++
Sbjct: 793 MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 852
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
D L M++ G P V +Y +++ CLC ++ +A+ + +M GVSP+ YN
Sbjct: 853 DLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGC 912
Query: 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
+ A + +M + + + N+ TYN LI ++ ++ + L D
Sbjct: 913 CSKGKIEDAFRFSEEMFKKGIEL-NLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPD 971
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ +Y LI G + + EM G+ P T+ L
Sbjct: 972 VFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLL 1013
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 89/212 (41%), Gaps = 1/212 (0%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K I A +F +R GI P S +++L + + +++++ + E P+ Y
Sbjct: 496 KMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY 555
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ + EL M + +SP+ YN + A +L+ +M
Sbjct: 556 GKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLA 615
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L +P++ TYN LI + + ++ +K + L ++ L+ GL + +
Sbjct: 616 RRL-LPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVE 674
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+A EM ++G +P TF L+ G +D
Sbjct: 675 DAENVLTEMKDQGFVPDAFTFSILFDGYSSND 706
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 84/196 (42%), Gaps = 6/196 (3%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
++ +GI P+ + T ++ L + + ++ + PS Y + D
Sbjct: 508 LRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 567
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
++L+ +MK D + P + YN+LI + +M ++++ + L L +Y
Sbjct: 568 VGKGLELFNRMKHDRIS-PTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYN 626
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
LI G C+ +++ + M + P +TF TL +GL ++ M+ + ++ ++
Sbjct: 627 TLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQ 686
Query: 290 -----SITFGSEFQNY 300
+ TF F Y
Sbjct: 687 GFVPDAFTFSILFDGY 702
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 10/144 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +Y +++ + +D A +MIE+ + + TYN L+ G + L
Sbjct: 1036 PDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC----- 1090
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ DEM+ R +EP+ ++ I++ + + M+EKG+ V
Sbjct: 1091 -----EVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCI 1145
Query: 122 YTSVVKCLCSCGRIEDAEELLGEM 145
+V L R ++AE ++ EM
Sbjct: 1146 GDELVSGLKEEWRSKEAENVISEM 1169
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 135/282 (47%), Gaps = 18/282 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I+G+ K + A +M++ G+ PNVVT N +++G+C+ ++
Sbjct: 119 PDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMD----- 173
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE V +M I P+ T+++ ++H Y + + ++ L M G P V T
Sbjct: 174 -----KAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVT 228
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ CLC G +A E+ M+++G P A TY Y + + M
Sbjct: 229 YNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMV 288
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQ 239
++ + N HT++I I + R+D +K +LG D+ +YT +I GLC+
Sbjct: 289 QNGM-RSNHHTFSIEIYAYCKCGRLD--EASLTFIKMQQLGFMPDIVTYTTVIDGLCKIG 345
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 281
+ +A F +MI+ GL P +TF TL G M W +
Sbjct: 346 RLDDAMSRFCQMIDDGLSPNIITFTTLIHGF---SMYGKWEK 384
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 139/307 (45%), Gaps = 46/307 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN Y SLI+G+ + A R L EM G PNVVTYN+L++ +C ++ H R
Sbjct: 188 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLC-KSGFHAEAR 246
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS--------------------RAHKP 100
++F+ M G +PD T++ +LH Y+ R++
Sbjct: 247 ---------EIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHH 297
Query: 101 QLSLD-------------KLNF--MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
S++ L F M++ G P + TYT+V+ LC GR++DA +M
Sbjct: 298 TFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQM 357
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+ +G+SP+ T+ + A +L+ +M + + P++ + +I +
Sbjct: 358 IDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGI-PPDVTIFTAMIDRLFKEGK 416
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ +++++ + + ++ SY +IHG + E + +M+ GL P VTF T
Sbjct: 417 VTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNT 476
Query: 266 LYRGLIQ 272
L G++
Sbjct: 477 LLDGMVS 483
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 138/367 (37%), Gaps = 69/367 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
P++ + LI C +++ LG++I+ G+ + V + LL +C +
Sbjct: 11 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70
Query: 53 -----------------ASLHPNERFEKTIRNAEKVFDEMRVRG--IEPDVTSFSIVLHV 93
++L EK A ++ M G PDV S+S V+H
Sbjct: 71 VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ + + M + GI P V T SV+ LC ++ AE +L +M+ + P+
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
TYN Y A+++ ++M D PN+ TYN+LI REI+
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQ-RPNVVTYNMLIDCLCKSGFHAEAREIF 249
Query: 214 NHVKGSELGLDLDSYTMLIHG-----------------------------------LCEK 238
N + S D +Y L+HG C+
Sbjct: 250 NSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKC 309
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL-----IQSDMLRTWRRLKKKLDEESITF 293
+ EA F++M + G +P VT+ T+ GL + M R + + L ITF
Sbjct: 310 GRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITF 369
Query: 294 GSEFQNY 300
+ +
Sbjct: 370 TTLIHGF 376
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 27/245 (11%)
Query: 11 IYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEK 70
IY +CK R+D A +M + G P++VTY +++G+C+ L +A
Sbjct: 303 IYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLD----------DAMS 352
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
F +M G+ P++ +F+ ++H +S K + + + M ++GI P V +T+++ L
Sbjct: 353 RFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLF 412
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
G++ +A++L M R G P+ +YN Y + MKL M L P
Sbjct: 413 KEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGL-KPTA 471
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
T+N L+ +++ L D+D+ LI CE + ++ F E
Sbjct: 472 VTFNTLLDGMVSMG----------------LKPDVDTCKTLIDSCCEDGRIEDILTLFRE 515
Query: 251 MIEKG 255
M+ K
Sbjct: 516 MLGKA 520
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 115/276 (41%), Gaps = 19/276 (6%)
Query: 33 RGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
+ V P++ T+ +L++ C L N F ++ G+ D +F+ +L
Sbjct: 7 KKVAPDIATFGILISCCCDAGCL--NLGF--------AALGQIIKTGLRADAVAFTPLLR 56
Query: 93 VYSRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG-- 149
+ +++ L M E G P V +Y++++K LC+ + E+A EL+ M +G
Sbjct: 57 TLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDN 116
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P +Y+ + D A L+ +M + + PN+ T N +I + MD
Sbjct: 117 CPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGI-PPNVVTCNSVIDGLCKVQAMDKA 175
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + + + +Y LIHG +W EA + EM G P VT+ L
Sbjct: 176 EAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDC 235
Query: 270 LIQSDMLRTWRRLKKKLDE-----ESITFGSEFQNY 300
L +S R + + + ++ T+GS Y
Sbjct: 236 LCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGY 271
>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Cucumis sativus]
Length = 683
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 138/273 (50%), Gaps = 12/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y++LI CK+ I+ AE L EM E+ PNV+TY+ L+NG ++ LH
Sbjct: 112 VPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH---- 167
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A KV +M + P++ +++I+L +A ++LD + MK+ G+ V
Sbjct: 168 ------DAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVF 221
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ V + GR+E+AEEL+ +M G+ P Y + + A+ L ++M
Sbjct: 222 ILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEM 281
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ V +I T+N+LI L + D I++ ++ L DL +Y +++G +K
Sbjct: 282 TSKNV-VFDIVTFNVLINCLFKLGKSD-TESIYSAMREMGLSPDLATYNTMLNGNFKKGN 339
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
W A + + EM + L+P +T + GL ++
Sbjct: 340 WTSALELWNEMKSRKLIPNAITCNIMINGLCEA 372
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 12/275 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YT+L+ G+ K ++ A EM + V ++VT+NVL+N + F
Sbjct: 253 PDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL-----------F 301
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + E ++ MR G+ PD+ +++ +L+ + +L+ N MK + + P T
Sbjct: 302 KLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAIT 361
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ LC GR+E+A ++L EMV G+ P++ TY + A+ ++ + +
Sbjct: 362 CNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLV 421
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L V YNILI L + ++ + D +Y LIHG C
Sbjct: 422 NMQLKVDK-DVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHL 480
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K A + M+ + + P T+ L GL ++ ++
Sbjct: 481 KRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLI 515
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLN--GVCRRAS--LH 56
+PN +I G C+ R++ A L EM+ G+ P TY +LLN RRA L
Sbjct: 356 IPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQ 415
Query: 57 PNE-------RFEKTI--------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+E + +K + R A V +M RGI D T+++ ++H Y
Sbjct: 416 THELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYC 475
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + + M + + P + TY ++ L G I +A++LL E+ + G+ P+A
Sbjct: 476 ISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNAC 535
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY + ++ +++Y +M +P YN+LIG F + +M +E+ N
Sbjct: 536 TYETLMCGHCKVRNTKECLRIYCEMVIKGF-IPKPRAYNMLIGYFSKMGKMKQAKELMNE 594
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKW------------KEACQYFVEMIEKGLLPQKVT 262
++ + +Y +LI G C K EA + F+EM ++G +P + T
Sbjct: 595 MQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVPCEST 653
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 145/349 (41%), Gaps = 63/349 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA------- 53
+PNV Y+SLI G+ K + A + L +M+ + PN+ TY +LL+G +
Sbjct: 147 VPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALD 206
Query: 54 ------------------SLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ N + + AE++ +M G++PD+ +++ ++ +
Sbjct: 207 LYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFL 266
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
++ K +L+ M K + + T+ ++ CL G+ D E + M G+SP
Sbjct: 267 KSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLA 325
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI------------------ 197
TYN + + A++L+ +MK L +PN T NI+I
Sbjct: 326 TYNTMLNGNFKKGNWTSALELWNEMKSRKL-IPNAITCNIMINGLCEAGRMENAIDILKE 384
Query: 198 ----GMF-------MALN------RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
G++ + LN R D + + + +L +D D Y +LI LC+
Sbjct: 385 MVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGM 444
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG-LIQSDMLRTWRRLKKKLDE 288
++A +M E+G++ T+ L G I S + R + L E
Sbjct: 445 TRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSE 493
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +++ G K A EM R + PN +T N+++NG+C +
Sbjct: 322 PDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRME----- 376
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA + EM + G+ P T++ I+L++ S++ + L + +
Sbjct: 377 -----NAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDV 431
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G A +L +M G+ TYN Y A Y M
Sbjct: 432 YNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTML 491
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TYN+L+G + ++ + +K L + +Y L+ G C+ +
Sbjct: 492 SERVS-PDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNT 550
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
KE + + EM+ KG +P+ + L
Sbjct: 551 KECLRIYCEMVIKGFIPKPRAYNML 575
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 131/292 (44%), Gaps = 11/292 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + S++YG CK ++ + L EM + G+ N V+Y +LL+ + +
Sbjct: 8 PDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK------- 60
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A M VRG DV + ++++ ++ + + + + + + P T
Sbjct: 61 ---VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYIT 117
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C G I AE L EM P+ TY+ Y + + A K+ R+M
Sbjct: 118 YSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMV 177
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +PNI TY IL+ D+ ++++ +K L ++ ++ + +
Sbjct: 178 HKN-AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRM 236
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
+EA + +M GL P V + L G ++S + + L +++ +++ F
Sbjct: 237 EEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVF 288
>gi|302763707|ref|XP_002965275.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
gi|300167508|gb|EFJ34113.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
Length = 445
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 134/301 (44%), Gaps = 34/301 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +LI C RI A L M +RGV PN VTYN + G+ + L +E F
Sbjct: 81 PNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLL--DEAF 138
Query: 62 E-------------------------KTIRNAE--KVFDEMRVRGIEPDVTSFSIVLHVY 94
E K+ + E KV + M +R IEP++ + +++LH +
Sbjct: 139 ELMGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETMLLRNIEPNILTLNLILHAF 198
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+A +P+ +L + M E G CPT+ T+ ++++ C+ +++ A ELL M R+ P+
Sbjct: 199 CKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAELLETMARSKCKPNF 258
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC--VPNIHTYNILIGMFMALNRMDMVREI 212
TY+ +++ A Q+ +C PN+ N + MD+
Sbjct: 259 VTYSIMVQKFAEMGRMVEARAFLEQLV---VCGYAPNLLVCNAYVAGLCKTGEMDLASRF 315
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ + +Y L+ G C+ + EA + EMI +G LP T+ L +GL
Sbjct: 316 LTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCS 375
Query: 273 S 273
+
Sbjct: 376 A 376
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 123/286 (43%), Gaps = 14/286 (4%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
V ++ ++ G+ + +D A+ L M +PN V+YN L++ +C
Sbjct: 51 VVLHNLMLKGFSEARLVDEAKSHLHRM---DCKPNSVSYNTLIDALCSSGR--------- 98
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
I+ A + M RG+ P+ +++ + +A + + + M+ G T T+
Sbjct: 99 -IQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFN 157
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
VV+ LC G+ ++A +++ M+ + P+ T N + A+ + M E
Sbjct: 158 PVVEFLCKSGKPDEACKVMETMLLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEM 217
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
C P I T+N L+ +F ++MD E+ + S+ + +Y++++ E + E
Sbjct: 218 GFC-PTIVTFNALLELFCNTDQMDSAAELLETMARSKCKPNFVTYSIMVQKFAEMGRMVE 276
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
A + +++ G P + GL ++ + R + EE
Sbjct: 277 ARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEE 322
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 106/278 (38%), Gaps = 51/278 (18%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPN--VVTYNVLLNGVCRRASLHPNERFEKT 64
Y +L++G C D A+R + E + G+ P VV +N++L G
Sbjct: 17 YGTLVHGHCLAGEFDEAKRLVAEFKDTGMSPGSLVVLHNLMLKG---------------- 60
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
F E R +V S H+ P +Y +
Sbjct: 61 -------FSEAR------------LVDEAKSHLHRMDCK-------------PNSVSYNT 88
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ LCS GRI++A E L M + GV+P+ TYN + A +L M+
Sbjct: 89 LIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFELMGVMESAG 148
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
+ + T+N ++ + D ++ + + ++ + +++H C+ + +EA
Sbjct: 149 FALTAV-TFNPVVEFLCKSGKPDEACKVMETMLLRNIEPNILTLNLILHAFCKAARPEEA 207
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
M+E G P VTF L +D + + L
Sbjct: 208 LGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAEL 245
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + + + G CK +D+A RFL M E G N TYN L+ G C+ +
Sbjct: 291 PNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMD----- 345
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA----HKPQLSLDKLNFMKEKGICP 117
AE+V +EM G PD T++S+++ A H + L ++ P
Sbjct: 346 -----EAERVLEEMIAEGSLPDSTTYSVLIQGLCSAGQIVHAFMVMLQVTRAVESAR--P 398
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEM 145
AT+ +++ LC G ++ A +L M
Sbjct: 399 DPATFVKLIEKLCELGEMDRAALVLERM 426
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 45/299 (15%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLN--------------- 47
+V YTSLI + R A +M E G +P ++TYNV+LN
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 48 -------GV-------------CRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSF 87
G+ C+R SLH + A +VF+EM+ G D ++
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLH---------QEAAQVFEEMKAAGFSHDKVTY 317
Query: 88 SIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147
+ +L VY ++H+P+ ++ LN M+ G P++ TY S++ G +++A EL +M
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
G P TY + AM ++ +M+ C PNI T+N I M+ +
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFV 436
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ +I++ + L D+ ++ L+ + E F EM G +P++ TF TL
Sbjct: 437 DMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 12/249 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y SL++ + I + E+ +EP V L+ VC + L P
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL-VCSKCDLLPE--- 612
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE+ F E++ RG PD+T+ + ++ +Y R + + L++MKE+G P++AT
Sbjct: 613 ------AERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMAT 666
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ +EE+L E++ G+ P +YN Y A +++ +M+
Sbjct: 667 YNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR 726
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + VP++ TYN IG + A + + + ++ + ++Y ++ G C+ +
Sbjct: 727 DSGI-VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRK 785
Query: 242 KEACQYFVE 250
EA + FVE
Sbjct: 786 DEA-KLFVE 793
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 122/294 (41%), Gaps = 17/294 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SLI + + +D A +M E+G +P+V TY LL+G R
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK------- 399
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC---PT 118
+ +A +F+EMR G +P++ +F+ + +Y K +D + E +C P
Sbjct: 400 ---VESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGK---FVDMMKIFDEINVCGLSPD 453
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ T+ +++ G + + EM R G P ET+N Y AM +YR
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M D P++ TYN ++ + ++ ++ + +Y L+H
Sbjct: 514 RML-DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
++ E+ + P+ V +TL + D+L R +L E +
Sbjct: 573 KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFS 626
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 109/266 (40%), Gaps = 11/266 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + + +LI + + + A M++ GV P++ TYN +L + R
Sbjct: 486 VPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG------- 538
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+EKV EM +P+ ++ +LH Y+ + L + I P
Sbjct: 539 ---MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAV 595
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++V C + +AE E+ G SP T N Y R+ A ++ M
Sbjct: 596 LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYM 655
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
KE P++ TYN L+ M EI + + D+ SY +I+ C +
Sbjct: 656 KERGF-TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
++A + F EM + G++P +T+ T
Sbjct: 715 MRDASRIFSEMRDSGIVPDVITYNTF 740
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 4/209 (1%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
D + +IV+ + + + + + N ++E G V +YTS++ + GR +A +
Sbjct: 172 DNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDA--NGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
+M G P+ TYN + G+ N L +MK D + P+ +TYN LI
Sbjct: 232 KKMEEEGCKPTLITYNVILNVF-GKMGTPWNKITSLVEKMKSDGIA-PDAYTYNTLITCC 289
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+ +++ +K + D +Y L+ + + KEA + EM G P
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSI 349
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
VT+ +L + ML LK ++ E+
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEK 378
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 2/210 (0%)
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +A +F+ ++ G DV S++ ++ ++ + + + +++ M+E+G PT+ T
Sbjct: 186 EGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLIT 245
Query: 122 YTSVVKCLCSCGRI-EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ G L+ +M +G++P A TYN + A +++ +M
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM 305
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + TYN L+ ++ +R ++ N ++ + + +Y LI
Sbjct: 306 KAAGFSHDKV-TYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGM 364
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA + +M EKG P T+ TL G
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 130/273 (47%), Gaps = 14/273 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +L+ G CK +R+D A + E +R P+VVTYN L+ A+L R
Sbjct: 130 PNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLM------AALFQLGRV 183
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + F +M G P + SF+ ++ RA + +L+ N M ++ P + T
Sbjct: 184 DEAL----ATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ V+ LC ++++A++LL MV G P Y + + A+ L R+M
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 299
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C+P++ TY ++I + R+D EI+ + ++ ++ +Y+ LI G C +
Sbjct: 300 SQG-CIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 358
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
E + EM + P VT+ T+ GL D
Sbjct: 359 DEGGKVMREMACR---PNVVTYNTMIWGLSMVD 388
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 53/272 (19%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + + ++I G C+ R+ A EMI+R PN+VTY+V+++G+C+ L
Sbjct: 199 VPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLD---- 254
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A+++ D M G PD+ +++ ++ +S A + +L L M +G P V
Sbjct: 255 ------EAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVV 308
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYR 178
TYT V+ LC GR++DA E+ E+V N SP+ TY+ Y R D G K+ R
Sbjct: 309 TYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGG--KVMR 366
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M C PN+ TYN + IW GL
Sbjct: 367 EMA----CRPNVVTYNTM---------------IW--------------------GLSMV 387
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ +EA F EM E G +P T+ L R L
Sbjct: 388 DRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 127/282 (45%), Gaps = 13/282 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-HPNERFEKTI 65
Y LI G+C + +D A L EM G++ N T +++L G+CR + E F+ ++
Sbjct: 28 YNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASL 87
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVATYTS 124
A +PDV S++ +++ + + + D M G C P TY +
Sbjct: 88 ELAHA----------QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNA 137
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
+V LC R++ A ++ E + +P TYN + A+ + QM E+
Sbjct: 138 LVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEG 197
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
VP + ++N +I R+ E++N + + +L +Y+++I GLC+ + EA
Sbjct: 198 Y-VPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEA 256
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
Q M+ +G P V + L G + L + L +++
Sbjct: 257 QQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 298
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 117/253 (46%), Gaps = 13/253 (5%)
Query: 40 VTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK 99
VTYNVL+ G C + L A + EM V G++ + + SI+L R +
Sbjct: 26 VTYNVLIRGFCNASDLDA----------AFSLLREMDVEGMQCNDRTTSIILQGLCRCGR 75
Query: 100 PQLSLDKLNFMKEKGIC-PTVATYTSVVKCLCSCGRIEDAEELLGEMVR-NGVSPSAETY 157
+L+ + E P V +YT+++ LC GR++ A +L +MV G P+A TY
Sbjct: 76 VAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTY 135
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
N + + A + + ++ D P++ TYN L+ L R+D + +
Sbjct: 136 NALVDGLCKQDRLDAARAVITEARKRDF-APDVVTYNTLMAALFQLGRVDEALATFTQMT 194
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
L S+ +I GLC ++ +A + F EMI++ P VT+ + GL +SD L
Sbjct: 195 EEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLD 254
Query: 278 TWRRLKKKLDEES 290
++L ++ E
Sbjct: 255 EAQQLLDRMVSEG 267
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 14/153 (9%)
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
S+ TYN + + D + A L R+M + + + T IL G L R V +
Sbjct: 24 SSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQG----LCRCGRVAQA 79
Query: 213 WNHVKGS-ELG---LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK-GLLPQKVTFETLY 267
H S EL D+ SYT LI+GLC+ + A F +M+ G P T+ L
Sbjct: 80 LEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALV 139
Query: 268 RGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
GL + D L R + K+ + +T+ +
Sbjct: 140 DGLCKQDRLDAARAVITEARKRDFAPDVVTYNT 172
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 130/274 (47%), Gaps = 12/274 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + ++ G+ + N ++ A M+E G +P+ V+Y++L++G+ + L
Sbjct: 149 PDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLD----- 203
Query: 62 EKTIRNAEKVFDEMRVR--GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ K+ EM +R G P+V +FS ++H R + + +L+ M E G P
Sbjct: 204 -----ESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNK 258
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYT+++ LC ++ A EL +M + + P A YN Y R + A KLYR+
Sbjct: 259 YTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYRE 318
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M P I T+N LI F L ++ E+ + L D +Y +LI GL
Sbjct: 319 MSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRAT 378
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
K EA + + +M EK L V+ + GL ++
Sbjct: 379 KLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKT 412
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 137/288 (47%), Gaps = 14/288 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y ++ K + A M P++VTYNVL+N C F K +
Sbjct: 13 YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAG------EFGKAL- 65
Query: 67 NAEKVFDEM-RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+F M R + +EPD +++ ++ + + + L+ M++K I V TY+S+
Sbjct: 66 ---DLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSI 122
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+K L + E++ ++L EM+ G +P +N + + + A ++Y+ M E
Sbjct: 123 IKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGY 182
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKE 243
N+ +Y+ILI + ++D +I + + G ++ +++ LIHGLC + ++
Sbjct: 183 KPDNV-SYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEK 241
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + F M+E G P K T+ TL GL +++ + R L +K+ + I
Sbjct: 242 ALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACI 289
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 55/297 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV +++LI+G C+ ++ A G M+E G +PN TY L+ G+CR
Sbjct: 220 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRA-------- 271
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-----GI 115
EK I+ A ++F++M I PD +++ ++ Y + + S+D+ + + G+
Sbjct: 272 -EKVIQ-ARELFEKMTQACIPPDAVAYNSLIAGYCK----RGSMDEAEKLYREMSGGAGL 325
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
PT+ T+ +++ C G++ A EL+ EM G++ TY + A++
Sbjct: 326 QPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALE 385
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
+Y+QM+E LD S + GL
Sbjct: 386 VYKQMREKKFL------------------------------------LDPVSCVSFVGGL 409
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
C+ +A F + G +P TF L LI+ + ++L + IT
Sbjct: 410 CKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDIT 466
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 12/289 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMI-ERGVEPNVVTYNVLLNGVCRRASLHPNE 59
+P++ Y LI C A M E+ VEP+ TYN L++G+C +
Sbjct: 42 VPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTE--- 98
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
A K+ EMR + I +V ++S ++ + KP+ S L M G P V
Sbjct: 99 -------GARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDV 151
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+ V++ +E A E+ MV +G P +Y+ + ++K+ +
Sbjct: 152 FAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSE 211
Query: 180 MKEDDLC-VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M VPN+ T++ LI ++ E++ + + + +YT LI GLC
Sbjct: 212 MAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRA 271
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+K +A + F +M + + P V + +L G + + +L +++
Sbjct: 272 EKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMS 320
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 145/323 (44%), Gaps = 41/323 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + I G CK +++ AE + ++ G PN+VTYN L++G C++ S R
Sbjct: 198 PNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYR- 256
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ + EM I P+ +F+ ++ + + + + M+ +G+ P + T
Sbjct: 257 ------ADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVT 310
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ L + G++++A L +MV G+ P+ T+N + +K A KL+ +
Sbjct: 311 YNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIA 370
Query: 182 EDDLC----------------------------------VPNIHTYNILIGMFMALNRMD 207
E DL PN+ TYN LI +
Sbjct: 371 EQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVR 430
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+++ N ++ EL D+ +Y +LI G C+ + +A + EM+ G+ P VT+ TL
Sbjct: 431 AAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLM 490
Query: 268 RGLIQSDMLRTWRRLKKKLDEES 290
G L+ +++ ++++E
Sbjct: 491 DGYCMEGNLKAALKVRTQMEKEG 513
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 135/275 (49%), Gaps = 16/275 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y SLI G ++D A +M+ G++PN+VT+N L+NG C++
Sbjct: 306 PNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKK--------- 356
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K I+ A K+FD++ + + P+ +F+ ++ + +A + N M ++GI P V+T
Sbjct: 357 -KMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVST 415
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC + A++LL EM + TYN + + + A KL +M
Sbjct: 416 YNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEML 475
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN TYN L+ + + ++ ++ ++ +Y +LI G C+ K
Sbjct: 476 NVGV-KPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKL 534
Query: 242 KEACQYFVEMIEKGLLPQKVTF-----ETLYRGLI 271
++A + EM+EKGL P + T+ E L +G I
Sbjct: 535 EDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFI 569
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 140/290 (48%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + +LI G+CK + A+ EM +G++PN+VTYN L+NG L N +
Sbjct: 271 PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLING------LSNNGKL 324
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ I ++D+M G++P++ +F+ +++ + + + + + + E+ + P T
Sbjct: 325 DEAI----ALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAIT 380
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C G +E+ L M+ G+ P+ TYNC ++ A KL +M+
Sbjct: 381 FNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEME 440
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+L ++ TYNILIG + ++ + + + +Y L+ G C +
Sbjct: 441 NYEL-KADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNL 499
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K A + +M ++G VT+ L +G ++ L RL ++ E+ +
Sbjct: 500 KAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGL 549
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 116/224 (51%), Gaps = 4/224 (1%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
V+ EM R I+P++T+F+I ++ +A K + D + +K G P + TY +++ C
Sbjct: 187 VYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHC 246
Query: 131 ---SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
S G++ A+ +L EM+ N + P+ T+N + ++ A + +M+ L
Sbjct: 247 KKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGL-K 305
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
PNI TYN LI ++D +W+ + G L ++ ++ LI+G C+K+ KEA +
Sbjct: 306 PNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKL 365
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
F ++ E+ L+P +TF T+ ++ M+ L + +E I
Sbjct: 366 FDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGI 409
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y LI GWCK AE+ LGEM+ GV+PN VTYN L++G C E
Sbjct: 447 DVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYC----------ME 496
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++ A KV +M G +V ++++++ + + K + + LN M EKG+ P TY
Sbjct: 497 GNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556
Query: 123 TSVVKCLCSCGRIEDAE 139
V + G I D E
Sbjct: 557 DVVRLEMLEKGFIPDIE 573
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YTSL++ +C A R L EM ++G PN TYNVLL + +
Sbjct: 389 PDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGR------- 441
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG------- 114
I AE++ + M +G D S +I++ R +K +++D ++ M +G
Sbjct: 442 ---ITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRL 498
Query: 115 ----------------ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
P TY+++V LC GR ++A++ L EM+ +SP + Y+
Sbjct: 499 GYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYD 558
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
F Y + A+K+ R M E C P+ TYN+LI F + D + ++ + +KG
Sbjct: 559 TFIHGYCKHGKTSLAVKVLRDM-EKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKG 617
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
+ ++ +Y LI CE+ +A EM++ ++P +FE L + ++
Sbjct: 618 KGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSA 677
Query: 279 WRRL 282
+R+
Sbjct: 678 AQRV 681
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 134/305 (43%), Gaps = 52/305 (17%)
Query: 1 MP--NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
MP N+ + +++ G+C+ ++D AER + M + G+ PNVVT+N ++ +C+
Sbjct: 207 MPTMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGR---- 262
Query: 59 ERFEKTIRNAEKVFDEMR---VRGI-EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG 114
+ +A ++F++M+ RG+ PD +F ++L + A + ++ M+ G
Sbjct: 263 ------VLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGG 316
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
V +Y + L G + +A+ELL EM GV P
Sbjct: 317 FLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQP---------------------- 354
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
N +TYNI++ + VR++ + VK + D+ +YT L+H
Sbjct: 355 --------------NSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHA 400
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
C + A + EM +KG P T+ L + L ++ + RL +++ E+ +
Sbjct: 401 YCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLD 460
Query: 295 SEFQN 299
+ N
Sbjct: 461 TASCN 465
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 14/179 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--RASLHPN 58
+P+ Y++L+ CK R D A++ L EMI + + P+ V Y+ ++G C+ + SL
Sbjct: 516 LPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSL--- 572
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
A KV +M +G +P ++++++ + H L ++ MK KGICP
Sbjct: 573 ---------AVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPN 623
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V TY S++K C G + A LL EM++N + P+ ++ K + D + A +++
Sbjct: 624 VMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVF 682
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 140/302 (46%), Gaps = 23/302 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
PNV Y LI C+ +R+ A R L EM +G P+ V++ +++ +C+
Sbjct: 160 PNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGI 219
Query: 53 -ASLHP-NERFEKTI---------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
A + P + + R V DEM RG+ PD +++ ++ + +A + +
Sbjct: 220 LAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELR 279
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
++ L M +G P V T+T +VK G++ DA + MV G +PS +YN
Sbjct: 280 MACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLI 339
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
+ D A+ ++ M + D C+P++ TY+ LI F +D+ IWN + +
Sbjct: 340 RGLCHIGDLKRALFVFSCMGKSD-CLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGC 398
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 281
++ YT ++ LC+K + +A +M + P +TF TL R L D+ R R
Sbjct: 399 KPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSL--CDLGRAGRA 456
Query: 282 LK 283
L
Sbjct: 457 LN 458
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 132/291 (45%), Gaps = 19/291 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV+ +T L+ G+ ++ A M+ G P+ ++YNVL+ G+C L
Sbjct: 294 VPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDL----- 348
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A VF M PDV ++S ++ +S+A +++ N M G P V
Sbjct: 349 -----KRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVV 403
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT++V LC + AE L+ +M P+ T+N + A A+ ++ M
Sbjct: 404 VYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGM 463
Query: 181 KEDDLCVPNIHTYN-ILIGMFMALNRMDMVR---EIWNHVKGSELGLDLDSYTMLIHGLC 236
+ C PN TYN +L G+F N D +R E+ NH G E L L SY I GLC
Sbjct: 464 RRYG-CPPNDRTYNELLHGLFREGNCEDALRMLTEMLNH--GFE--LSLVSYNTTISGLC 518
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+ + KEA MI +G+ P TF + + +R + ++D
Sbjct: 519 QMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMD 569
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 127/270 (47%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V+ Y++LI G+ K +D+A +M G +PNVV Y +++ +C++
Sbjct: 364 LPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKV------M 417
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F++ AE + D+M + P+ +F+ ++ + +L+ + M+ G P
Sbjct: 418 FDQ----AENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDR 473
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ L G EDA +L EM+ +G S +YN + AM L +M
Sbjct: 474 TYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRM 533
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P+ T+N +I + + + + ++ +YT L+ GLC + K
Sbjct: 534 IIQGI-QPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHK 592
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+A Y ++M+ +G+ P + T+ L RG+
Sbjct: 593 LDDAMVYLLKMLYEGICPNEATWNVLVRGI 622
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 115/300 (38%), Gaps = 46/300 (15%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIER-----GVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
+L+ C R A+R L P V YN LL+ + R E
Sbjct: 92 ALVAAICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLR----------EN 141
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+ V+D MR G+EP+V ++++++ + + + L+ M KG P ++T
Sbjct: 142 LVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHT 201
Query: 124 SVVKCLCSCGRIEDAEELLG------------------------------EMVRNGVSPS 153
+++ LC R+++A +L EMV G+ P
Sbjct: 202 TIISALCKLDRLDEARGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPD 261
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
Y + ++ A + +M + CVPN+ T+ +L+ F ++ +W
Sbjct: 262 TVAYTSIVGAFCKARELRMACAILARMVTEG-CVPNVQTFTVLVKGFFDDGKVHDALGMW 320
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
N + SY +LI GLC K A F M + LP T+ TL G ++
Sbjct: 321 NWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKA 380
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + Y L++G + + A R L EM+ G E ++V+YN ++G+C+
Sbjct: 470 PNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQM--------- 520
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I+ A + M ++GI+PD +F+ ++H Y + + + L M +
Sbjct: 521 -RMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVA 579
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ LCS +++DA L +M+ G+ P+ T+N + G M L +
Sbjct: 580 YTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLGTIGPMHLIDHII 639
Query: 182 ED 183
ED
Sbjct: 640 ED 641
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 79/176 (44%), Gaps = 1/176 (0%)
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ + V+ L + G ++ + L EM GV+ + A+ A+K + +
Sbjct: 57 AHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRA 116
Query: 181 KEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ D C P + YN L+ + N + V ++++++ + + ++ +Y +LI LC+
Sbjct: 117 RHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQND 176
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
+ A + EM KG P +V+ T+ L + D L R + ++ ++ +
Sbjct: 177 RVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNA 232
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 133/269 (49%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + ++ C R AE+ L +M+ +G P+VVT+N+L+N +CR+ L
Sbjct: 150 PNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG----- 204
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M + G P+ S++ +LH + + K +++ L+ M +G P + T
Sbjct: 205 -----RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 259
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G+++ A E+L ++ G SP TYN A+KL +M+
Sbjct: 260 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 319
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I TY+ L+ ++D + ++ ++G + + +Y ++ GLC+ ++
Sbjct: 320 RKGL-KPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 378
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A + MI K P + T+ L G+
Sbjct: 379 DRAIDFLAYMISKRCKPTEATYTILIEGI 407
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI G CK R+D A +FL M G +PNV+T+N++L +C
Sbjct: 115 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRW------ 168
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+AEK+ +M +G P V +F+I+++ R ++D L M G P +
Sbjct: 169 ----MDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 224
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C +++ A E L MV G P TYN + A+++ Q+
Sbjct: 225 YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 284
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P + TYN +I + + + ++ + ++ L D+ +Y+ L+ GL + K
Sbjct: 285 SKG-CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKV 343
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA ++F ++ G+ P +T+ ++ GL +S
Sbjct: 344 DEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 375
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 126/256 (49%), Gaps = 11/256 (4%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
CK + + A + L EM +G +P+VVTYNVL+NG+C+ E + A K +
Sbjct: 93 CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK----------EGRLDEAIKFLNN 142
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
M G +P+V + +I+L + + L+ M KG P+V T+ ++ LC G
Sbjct: 143 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL 202
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+ A ++L +M +G +P++ +YN + K + A++ Y + C P+I TYN
Sbjct: 203 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIE-YLDIMVSRGCYPDIVTYN 261
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
L+ ++D+ EI N + L +Y +I GL + K + A + EM K
Sbjct: 262 TLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 321
Query: 255 GLLPQKVTFETLYRGL 270
GL P +T+ +L GL
Sbjct: 322 GLKPDIITYSSLVSGL 337
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 12/242 (4%)
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A K+ DEMR +G +PDV +++++++ + + ++ LN M G P V T
Sbjct: 95 ESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 154
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG-AMKLYRQM 180
+ +++ +CS GR DAE+LL +M+R G SPS T+N + R+ G A+ + +M
Sbjct: 155 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI-NFLCRQGLLGRAIDILEKM 213
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C PN +YN L+ F +MD E + + D+ +Y L+ LC+ K
Sbjct: 214 PMHG-CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 272
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK-------KKLDEESITF 293
A + ++ KG P +T+ T+ GL S + +T R +K K L + IT+
Sbjct: 273 VDVAVEILNQLSSKGCSPVLITYNTVIDGL--SKVGKTERAIKLLDEMRRKGLKPDIITY 330
Query: 294 GS 295
S
Sbjct: 331 SS 332
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 1/190 (0%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
++ FS + + ++ L+ M+ KG P V TY ++ +C GR+++A + L
Sbjct: 81 SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
M G P+ T+N + A KL M C P++ T+NILI
Sbjct: 141 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG-CSPSVVTFNILINFLCR 199
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
+ +I + + SY L+HG C+++K A +Y M+ +G P VT
Sbjct: 200 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 259
Query: 263 FETLYRGLIQ 272
+ TL L +
Sbjct: 260 YNTLLTALCK 269
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 12/292 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +Y++LI+G CK ++D A L +M + P+ +TYNVL++G+C+ + F
Sbjct: 159 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAF 218
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT-VA 120
FDEM G +PDV +++I++ + +A + L C +
Sbjct: 219 ----------FDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIH 268
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT++V L +IE+A L+ ++ NG +P+ TYN A+ L R++
Sbjct: 269 TYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 328
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D+ C P++ TY LI R +++ + L LD YT LI L + K
Sbjct: 329 V-DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGK 387
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A + M G +P VT T+ GL ++ + R+ K ++ +
Sbjct: 388 IPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA 439
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 43/313 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI G CK ++ A F EM+E G +P+V TYN+L++G C+ +
Sbjct: 194 PDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN------- 246
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
T + + E + G D+ +++ ++ ++ K + ++ + + G PT+AT
Sbjct: 247 --TDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIAT 304
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GR+E+A +LL ++V NG +P TY K + A KL+++M
Sbjct: 305 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 364
Query: 182 EDDL----------------------------------CVPNIHTYNILIGMFMALNRMD 207
L CVP++ T + +I R+
Sbjct: 365 LRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIG 424
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
I+ ++ L + Y+ LIHGLC+ +K A + +M + P +T+ L
Sbjct: 425 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 484
Query: 268 RGLIQSDMLRTWR 280
GL +S + R
Sbjct: 485 DGLCKSGDVEAAR 497
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 26/279 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPNER 60
P + Y +L+ G CK+ R++ A L ++++ G P+VVTY L++G+ + + S +
Sbjct: 300 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359
Query: 61 FEKT------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F++ I A V+ M G PDV + S ++ S+
Sbjct: 360 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 419
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + ++ M+ +G+ P Y++++ LC +++ A E+L +M + +P T
Sbjct: 420 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 479
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN D A + +M E C P+++TYNILI F D +++ +
Sbjct: 480 YNILIDGLCKSGDVEAARAFFDEMLEAG-CKPDVYTYNILISGFCKAGNTDAACGVFDDM 538
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
S ++ +Y LI GLC++++ +A YF M E+G
Sbjct: 539 SSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 138/327 (42%), Gaps = 47/327 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y +L+ G CK+ R++ A L ++++ G P+VVTY L++G+ +
Sbjct: 19 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK---------- 68
Query: 62 EKTIRNAEKVFDEMRVRGIE-----------------------------------PDVTS 86
EK A K+F EM +RG+ PDV +
Sbjct: 69 EKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVT 128
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
S ++ S+A + ++ M+ +G+ P Y++++ LC +++ A E+L +M
Sbjct: 129 LSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 188
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+ +P TYN D A + +M E C P+++TYNILI F
Sbjct: 189 KAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAG-CKPDVYTYNILISGFCKAGNT 247
Query: 207 DMV-REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
D + + +D+ +YT ++ L + +K +EA ++ G P T+
Sbjct: 248 DAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNA 307
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESIT 292
L GL + L L +K+ + T
Sbjct: 308 LLNGLCKMGRLEEAIDLLRKIVDNGCT 334
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 10/264 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT+LI + +I A M G P+VVT + +++G+ + I
Sbjct: 94 YTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR----------IG 143
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++F M RG+ P+ +S ++H +A K +L+ L MK+ P TY ++
Sbjct: 144 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLI 203
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G +E A EM+ G P TYN + + + A Q + C
Sbjct: 204 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGC 263
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+IHTY ++ +++ + + + + +Y L++GLC+ + +EA
Sbjct: 264 TIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAID 323
Query: 247 YFVEMIEKGLLPQKVTFETLYRGL 270
++++ G P VT+ +L GL
Sbjct: 324 LLRKIVDNGCTPDVVTYTSLIDGL 347
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 11/255 (4%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
+I+ A + ++ G P + TYN LLNG+C+ R E+ I K+ D
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMG------RLEEAIDLLRKIVD----N 50
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G PDV +++ ++ + + + M +G+ YT++++ L G+I A
Sbjct: 51 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQA 110
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
+ M +G P T + A+++++ M+ L PN Y+ LI
Sbjct: 111 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL-APNEVVYSALIH 169
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
+MD E+ +K + D +Y +LI GLC+ + A +F EM+E G P
Sbjct: 170 GLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKP 229
Query: 259 QKVTFETLYRGLIQS 273
T+ L G ++
Sbjct: 230 DVYTYNILISGFCKA 244
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +++I G K RI A R M RG+ PN V Y+ L++G+C+
Sbjct: 404 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK--------- 454
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A ++ +M+ PD +++I++ ++ + + + M E G P V
Sbjct: 455 -ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 513
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ C G + A + +M + S + TY R+ A ++ M
Sbjct: 514 TYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHM 573
Query: 181 KE 182
KE
Sbjct: 574 KE 575
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 139/324 (42%), Gaps = 46/324 (14%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V +Y++LI G+C +D + EM+E+G+ PNVV Y+ L+NG C++
Sbjct: 79 DVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKG--------- 129
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
R A V M RGI+PDV +++ ++ + + + +LD + M EKG P+ TY
Sbjct: 130 -LWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTY 188
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ LC G I DA ++ M+ G +YN + AMKL+ + E
Sbjct: 189 NVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLE 248
Query: 183 DDLCV-PNIHTYN-----------------------------------ILIGMFMALNRM 206
D V P++ T+N ILIG ++ +
Sbjct: 249 DGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGII 308
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D E+W V L +Y+++I G C+ A F M GL P + TL
Sbjct: 309 DKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTL 368
Query: 267 YRGLIQSDMLRTWRRLKKKLDEES 290
L + L RRL +++ E +
Sbjct: 369 MASLCKESSLEQARRLFQEMKESN 392
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 148/293 (50%), Gaps = 13/293 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT +I G CK R A M E+G EP+ VTYNVL+NG+C+
Sbjct: 148 PDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCK---------- 197
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG--ICPTV 119
E I +A K+F+ M +G +V S++ ++ K ++ + + E G + P V
Sbjct: 198 EGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDV 257
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+ +V++ LC GR++ A E+ M+ G + T + EY + AM+L+++
Sbjct: 258 ITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKR 317
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ + L VP+ TY+++I F ++ ++ + +++ +K S L L Y L+ LC++
Sbjct: 318 VHKLGL-VPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKES 376
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
++A + F EM E P ++F + G +++ + + + L + + +T
Sbjct: 377 SLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLT 429
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 139/289 (48%), Gaps = 17/289 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y L+ G CK R++ A R LGEM +G+E +VV Y+ L++G C + L
Sbjct: 43 PNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLD----- 97
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +FDEM +GI P+V +S +++ + + + + L+ M E+GI P V T
Sbjct: 98 -----RGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYT 152
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ LC GR A +L M G PS TYN A K++ M
Sbjct: 153 YTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETML 212
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCEKQ 239
E + + +YN LI ++D ++++ + G+ + D+ ++ +I GLC++
Sbjct: 213 EKGKRL-EVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEG 271
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM----LRTWRRLKK 284
+ +A + + MIE+G T L I+S + + W+R+ K
Sbjct: 272 RLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHK 320
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 141/305 (46%), Gaps = 26/305 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y ++I G CK R++ A L EM EPN TY +L++G+C+
Sbjct: 7 LPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCK--------- 57
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF--MKEKGICPT 118
E + A ++ EM+ +G+E DV +S ++ + K L K F M EKGI P
Sbjct: 58 -EGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGF--CSKGCLDRGKALFDEMLEKGISPN 114
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF----KEYRGRKDANGAM 174
V Y+ ++ C G +A +L M G+ P TY C K+ R RK A+
Sbjct: 115 VVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARK----AL 170
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
L+ M E P+ TYN+LI + +I+ + L++ SY LI G
Sbjct: 171 DLFDLMTEKGE-EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMG 229
Query: 235 LCEKQKWKEACQYFVEMIEKG--LLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
LC K EA + F ++E G + P +TF T+ +GL + L + + E +
Sbjct: 230 LCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERG-S 288
Query: 293 FGSEF 297
FG+ F
Sbjct: 289 FGNLF 293
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 142/298 (47%), Gaps = 13/298 (4%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERG--VEPNVVTYNVLLNGVCRRASLHPNERF 61
V Y +LI G C ++D A + ++E G VEP+V+T+N ++ G+C+ R
Sbjct: 220 VVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEG------RL 273
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K + +++D M RG ++ + I++ Y ++ +++ + + G+ P+ T
Sbjct: 274 DKAV----EIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTT 329
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ C + A+ L M +G+SP+ YN A +L+++MK
Sbjct: 330 YSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMK 389
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + C P+ ++NI+I + + +E+ N ++ L D +Y+ I+ L + +
Sbjct: 390 ESN-CEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQM 448
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+EA F MI G+ P +++L +G +D + L +++ + + E N
Sbjct: 449 EEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITN 506
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 32/277 (11%)
Query: 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P++V+YN ++NG+C+ EK + A + EM EP+ ++ I++ +
Sbjct: 8 PDIVSYNTIINGLCK----------EKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCK 57
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + ++ L MK KG+ V Y++++ CS G ++ + L EM+ G+SP+
Sbjct: 58 EGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVV 117
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM-------ALNRMDMV 209
Y+C + + A + M E + P+++TY +IG AL+ D++
Sbjct: 118 YSCLINGFCKKGLWREATAVLHTMTERGI-QPDVYTYTCMIGGLCKDGRARKALDLFDLM 176
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
E KG E +Y +LI+GLC++ +A + F M+EKG + V++ TL G
Sbjct: 177 TE-----KGEE--PSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMG 229
Query: 270 LIQSDMLRTWRRLKKKLDEES-------ITFGSEFQN 299
L + L +L L E+ ITF + Q
Sbjct: 230 LCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQG 266
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+ +I G+CK++ ++ A+ M G+ P + YN L+ +C+ +SL
Sbjct: 324 VPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLE---- 379
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++F EM+ EPD SF+I++ +A + + LN M++ G+ P
Sbjct: 380 ------QARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAY 433
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+S + L G++E+A+ M+ +G++P Y+ K + + + L RQM
Sbjct: 434 TYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493
Query: 181 KE 182
+
Sbjct: 494 AD 495
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 1/196 (0%)
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
M+ I PD+ S++ +++ + + + ++D L M+ P TY ++ LC GR
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
+E+A LLGEM R G+ Y+ + + + L+ +M E + PN+ Y+
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGIS-PNVVVYS 119
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
LI F + + + + D+ +YT +I GLC+ + ++A F M EK
Sbjct: 120 CLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK 179
Query: 255 GLLPQKVTFETLYRGL 270
G P VT+ L GL
Sbjct: 180 GEEPSTVTYNVLINGL 195
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 20/293 (6%)
Query: 2 PNVKMYTSLIYGWCK------INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL 55
P+V Y SLI G+CK + +DM L EM+E G+ P VT+ VL+NG C+ ++
Sbjct: 224 PSVATYNSLIDGYCKKGGAGNMYHVDM---LLKEMVEAGISPTAVTFGVLINGYCKNSNT 280
Query: 56 HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
A +VF+EM+ +GI V +++ ++ K + + + M++ G+
Sbjct: 281 AA----------AVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P T+ V+K C G + DA + + M V P Y YR AM
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMA 390
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
+ M + + PN+ TYN LI F + + +K + D+ +Y +LI L
Sbjct: 391 VKEAMAKKGIS-PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
C K + ++A + EM E GL P +T+ T+ +G +++ ++ ++++
Sbjct: 450 CCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 125/270 (46%), Gaps = 11/270 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y SLI G C +++ + + EM + G+ PN +T+ +L G C++ +
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMA------ 351
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A D M R +EPDV ++I++ Y R K + ++ M +KGI P V TY
Sbjct: 352 ----DANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTY 407
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ G A LL EM G+ TYN + + A+KL +M E
Sbjct: 408 NCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE 467
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L PN TYN +I F + EI ++ ++ +Y + I C+ K
Sbjct: 468 VGL-EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMD 526
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA EM++K L+P +T+ET+ G+++
Sbjct: 527 EANDLLNEMLDKCLVPNGITYETIKEGMME 556
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
PS + N G K + A K +R + P+I+T+N +I + ++ +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVS-PDIYTFNTVISGLCRIGQLRKAGD 212
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV-----EMIEKGLLPQKVTFETL 266
+ +K L + +Y LI G C +K Y V EM+E G+ P VTF L
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYC--KKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVL 270
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESIT 292
G ++ R+ +++ ++ I
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIA 296
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 145/314 (46%), Gaps = 33/314 (10%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YTSL+ G+ K D A + +M+ G + ++ TY+VLL +C+ +K +
Sbjct: 598 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCK----------QKKLN 647
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + D+M V G++ ++ +++I++ + K + N M G P+ TYT +
Sbjct: 648 EALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFI 707
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C GRIE+AE L+GEM R+GV+P TYN F + A ++M D C
Sbjct: 708 SSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMV-DASC 766
Query: 187 VPNIHTYNILIGMFMALN----------------RMDMVREIWNHVKGSELGLDLDSYTM 230
PN TY +L+ F+ ++ ++MV ++ + L + +Y+
Sbjct: 767 EPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSS 826
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ--SDMLRTWRRLKKKLDE 288
+I G C+ + +EAC M+ K + P E +Y LI+ D+ + + D
Sbjct: 827 IIAGFCKATRLEEACVLLDHMLGKDISPN----EEIYTMLIKCCCDIKLFGKAVSFVTDM 882
Query: 289 ESITFGSEFQNYHF 302
F + ++YH+
Sbjct: 883 IEFGFQPQLESYHY 896
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 139/288 (48%), Gaps = 12/288 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT LI G C+ + A + M+ G N+ TY +L+ G+C+ +H
Sbjct: 252 YTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIH---------- 301
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + DEM +RG+ P V +++ ++ Y ++ + + +L M++ G P TY S++
Sbjct: 302 DARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLI 361
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G++++AEELL + G +P+ T+ Y + + A+++ M + C
Sbjct: 362 YGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSN-C 419
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
++ Y +LI + + R+ +E N + + L ++ +YT +I G C+ A +
Sbjct: 420 KLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALE 479
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
F M +G P T+ +L GLIQ L L K+ E+ IT G
Sbjct: 480 VFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPG 527
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 131/288 (45%), Gaps = 17/288 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y SLIYG + ++ A + +M E G+ P V+TY L+ G C++ F
Sbjct: 491 PNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKK------HEF 544
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ NA ++F+ M G+ PD +++++ ++ + + + +F+ KG+ T T
Sbjct: 545 D----NAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAE---EAYSFLVRKGVVLTKVT 597
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS+V G + A L+ +MV G TY+ + +K N A+ + QM
Sbjct: 598 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMT 657
Query: 182 EDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C NI Y I+I + + D + ++N + S +YT+ I C+ +
Sbjct: 658 VSGVKC--NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGR 715
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKKKLD 287
+EA EM G+ P VT+ G + R + LK+ +D
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVD 763
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 143/333 (42%), Gaps = 48/333 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I +CK + +A R+ + E G++ + T N LL G CR + L
Sbjct: 176 LPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDL----- 230
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
R A + M + G + S++I++ A + +L + M G +
Sbjct: 231 -----RKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLH 285
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGR-KDANGAMKLY 177
TYT ++K LC GRI DA LL EM GV PS TYN Y GR KDA G L
Sbjct: 286 TYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM 345
Query: 178 RQ--MKEDD---------LC-------------------VPNIHTYNILIGMFMALNRMD 207
Q DD LC P + T+ LI + R+D
Sbjct: 346 EQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ +++ S LDL +Y +LI+ L +K + KEA + EM GL P VT+ ++
Sbjct: 406 DALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSII 465
Query: 268 RGLIQSDMLRTWRRLKKKLDEESI-----TFGS 295
G + M+ + K ++ E T+GS
Sbjct: 466 DGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGS 498
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 12/290 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ YT LI G CK RI A L EM RGV P+V TYN +++G C+ +
Sbjct: 283 NLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRM------- 335
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++A + M G PD +++ +++ K + + LN +G PTV T+
Sbjct: 336 ---KDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITF 391
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ C RI+DA + M+ + + Y + A + +M
Sbjct: 392 TNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFA 451
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ L PN+ TY +I + + + E++ ++ + +Y LI+GL + +K
Sbjct: 452 NGL-APNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLH 510
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A +M E G+ P +T+ TL +G + RL + +++ +T
Sbjct: 511 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLT 560
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 30/300 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y SLIYG C ++D AE L I RG P V+T+ L+NG C+ + R
Sbjct: 352 PDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRV 410
Query: 62 EKT-------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ ++ A++ +EM G+ P+V +++ ++ Y +
Sbjct: 411 KSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCK 470
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L+ M+ +G P TY S++ L ++ A L+ +M +G++P T
Sbjct: 471 VGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIT 530
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + + + + A +L+ M+++ L P+ YN+L AL + E ++ +
Sbjct: 531 YTTLIQGQCKKHEFDNAFRLFEMMEQNGL-TPDEQAYNVLTD---ALCKSGRAEEAYSFL 586
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ L +YT L+ G + A +M+ +G T+ L + L + L
Sbjct: 587 VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKL 646
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 122/313 (38%), Gaps = 66/313 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT I +CKI RI+ AE +GEM GV P+VVTYN+ +NG
Sbjct: 698 PSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMG-------- 749
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR-----AHKPQLS-----------LD 105
I A M EP+ ++ ++L + + AH S
Sbjct: 750 --YIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQ 807
Query: 106 KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR 165
L M + G+ PTV TY+S++ C R+E+A LL M+ +SP+ E Y K
Sbjct: 808 LLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIK--- 864
Query: 166 GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD- 224
C +I + + DM+ E G
Sbjct: 865 --------------------CCCDIKLFGKAVSFVT-----DMI----------EFGFQP 889
Query: 225 -LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
L+SY LI GLC++ + A F +++ +V ++ L GL+++ + +L
Sbjct: 890 QLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLL 949
Query: 284 KKLDEESITFGSE 296
+D SE
Sbjct: 950 AAMDNRHCRIDSE 962
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 138/303 (45%), Gaps = 12/303 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI+ CK I A + EM+ RG++ + T N +L +C+
Sbjct: 413 PDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCK---------- 462
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK A+ + RG PD S+ V+ Y + + + +L + M EK + P+++T
Sbjct: 463 EKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIST 522
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K L GR+++A + L E++ G+ P TYN Y D A + + +M
Sbjct: 523 YNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMV 582
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ P++ T N L+ ++D +++ +D+ +Y LI +C+
Sbjct: 583 ENSF-KPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDV 641
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
A +F +M +GL P T+ + L ++ + + KL ES T F +
Sbjct: 642 DTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKL-AESGTLSQSFSSPL 700
Query: 302 FKP 304
KP
Sbjct: 701 LKP 703
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 149/347 (42%), Gaps = 68/347 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGV--CRRASLHPN 58
P++ Y L G C+ ++D A R EM G + P+VVTYN L + CR +S
Sbjct: 307 PDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSS---- 362
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+A ++ +EMR +G++ + + +IV+ + + + +L LN M + G+ P
Sbjct: 363 --------DALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPD 414
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN-------------------- 158
V TY +++ C G I A L+ EMVR G+ T N
Sbjct: 415 VITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQ 474
Query: 159 -------------------CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
+FKEY ++ A++L+ +M E L P+I TYN LI
Sbjct: 475 SPPQRGFMPDEVSYGTVMAAYFKEY----NSEPALRLWDEMIEKKL-TPSISTYNTLIKG 529
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ R+ + N + L D +Y ++IH C++ + A Q+ +M+E P
Sbjct: 530 LSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPD 589
Query: 260 KVTFETLYRGLIQSDML-------RTWRRLKKKLDEESITFGSEFQN 299
VT TL GL + L +W KK+D IT+ + Q
Sbjct: 590 VVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVD--VITYNTLIQT 634
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 133/307 (43%), Gaps = 46/307 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y +++ + K + A R EMIE+ + P++ TYN L+ G+ R L E
Sbjct: 482 MPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRL--KEA 539
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K +E+ +G+ PD T+++I++H Y + + + N M E P V
Sbjct: 540 IDK--------LNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVV 591
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +++ LC G+++ A +L V G TYN + D + A+ + M
Sbjct: 592 TCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADM 651
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIW--------------------NHVKGSE 220
+ L P+ TYN+++ R + + + + V +E
Sbjct: 652 EARGL-QPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAE 710
Query: 221 LGLDL---------------DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
G D ++YT L++GLC ++KEA EM++KG+ T+ T
Sbjct: 711 SGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYIT 770
Query: 266 LYRGLIQ 272
L GL++
Sbjct: 771 LMEGLVK 777
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 119/273 (43%), Gaps = 13/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNE 59
+P+ + + + + ++ +A + L + R V P++ N +L+ + R S P
Sbjct: 128 LPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQA 187
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ F + + P+ +F++++H + +L L+ M+ G+ P
Sbjct: 188 SLD--------AFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDA 239
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY +++ C G + +A LL M ++GV+P+ TYN Y A K+
Sbjct: 240 VTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEA 299
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK--GSELGLDLDSYTMLIHGLCE 237
M + P++ TYN+L ++D + + ++ G+ L D+ +Y L +
Sbjct: 300 MTANGF-EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLP-DVVTYNTLADACFK 357
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ +A + EM EKG+ VT + +GL
Sbjct: 358 CRCSSDALRLLEEMREKGVKATLVTHNIVIKGL 390
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 127/264 (48%), Gaps = 10/264 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V YT+LI + + R + + L M + P+++TYN ++N C R L +E
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVIN-ACARGGLD----WE 229
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ +F EMR GI+PD+ +++ +L + + M + GI P + TY
Sbjct: 230 GLL----GLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTY 285
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ +V+ R+E +LL EM G P +YN + Y AM ++ QM+
Sbjct: 286 SHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 345
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C PN +TY++L+ +F R D VR+++ +K S D +Y +LI E +K
Sbjct: 346 AG-CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
E F +M+E+ + P T+E +
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGI 428
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 6/216 (2%)
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+VFDEM +G+ V S++ +++ Y R + + SL+ L+ MK I P++ TY +V+
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINA- 220
Query: 130 CSCGRIEDAEELLG---EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C+ G + D E LLG EM G+ P TYN R + A ++R M D
Sbjct: 221 CARGGL-DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN-DGGI 278
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VP++ TY+ L+ F L R++ V ++ + + D+ SY +L+ + KEA
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
F +M G P T+ L QS R+L
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 146/335 (43%), Gaps = 33/335 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLG---EMIERGVEPNVVTYNVLLN-----GVCRRA 53
P++ Y ++I C +D E LG EM G++P++VTYN LL+ G+ A
Sbjct: 209 PSILTYNTVINA-CARGGLDW-EGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266
Query: 54 SL------------------HPNERFEKTIRNAEKVFD---EMRVRGIEPDVTSFSIVLH 92
+ H E F K +R EKV D EM G PD+TS++++L
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLVETFGK-LRRLEKVSDLLSEMASGGSLPDITSYNVLLE 325
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
Y+++ + ++ + M+ G P TY+ ++ GR +D +L EM + P
Sbjct: 326 AYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDP 385
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
A TYN + + + L+ M E+++ P++ TY +I + R+I
Sbjct: 386 DAATYNILIEVFGEGGYFKEVVTLFHDMVEENI-EPDMETYEGIIFACGKGGLHEDARKI 444
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++ +++ +YT +I + ++EA F M E G P T+ +L +
Sbjct: 445 LQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFAR 504
Query: 273 SDMLRTWRRLKKKLDEESITFGSEFQNYHFKPYRR 307
+++ + +L + I + N + Y++
Sbjct: 505 GGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQ 539
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 129/301 (42%), Gaps = 16/301 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI + + +M+E +EP++ TY ++ C + LH + R
Sbjct: 385 PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF-ACGKGGLHEDAR- 442
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K+ M I P +++ V+ + +A + +L N M E G P++ T
Sbjct: 443 --------KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ G ++++E +L +V +G+ + +T+N + Y+ A+K Y M
Sbjct: 495 YHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDM- 553
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P+ T ++ ++ +D RE + +K S++ + Y M++ + ++W
Sbjct: 554 EKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERW 613
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK---KKLDEESITFGSEFQ 298
+ + EM+ + + +G D W+ ++ KL+ E G F
Sbjct: 614 DDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDD--SNWQIVEYVLDKLNSEGCGLGIRFY 671
Query: 299 N 299
N
Sbjct: 672 N 672
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 127/294 (43%), Gaps = 32/294 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---- 56
+P++ Y+ L+ + K+ R++ L EM G P++ +YNVLL + S+
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 57 -----------PNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
PN + N ++F EM+ +PD +++I++ V+
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + M E+ I P + TY ++ G EDA ++L M N + PS++
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSK 458
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE---I 212
Y + + A+ + M E P+I TY+ L+ F R +V+E I
Sbjct: 459 AYTGVIEAFGQAALYEEALVAFNTMHEVG-SNPSIETYHSLLYSFA---RGGLVKESEAI 514
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + S + + D++ I + K++EA + +V+M + P + T E +
Sbjct: 515 LSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAV 568
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
+P+ ++I++ + R L+ + M +G+ +V +YT+++ GR E + E
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 141 LLGEMVRNGVSPSAETYNCFFKE-YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
LL M + +SPS TYN RG D G + L+ +M+ + + P+I TYN L+
Sbjct: 198 LLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI-QPDIVTYNTLLSA 256
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
D ++ + + DL +Y+ L+ + ++ ++ EM G LP
Sbjct: 257 CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPD 316
Query: 260 KVTFETLYRGLIQSDMLR 277
++ L +S ++
Sbjct: 317 ITSYNVLLEAYAKSGSIK 334
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 54/114 (47%)
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
S + FKE+ GR D +++L++ M+ C PN H Y I+I + +D E+
Sbjct: 104 SLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEV 163
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ + + + SYT LI+ +++ + + M + P +T+ T+
Sbjct: 164 FDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTV 217
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 139/283 (49%), Gaps = 14/283 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +Y LI G C + ++ A RF EM + G+ +VTYN L+ G+C+ L
Sbjct: 414 LPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKL----- 468
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ AE++F + G PDV +++ ++ YS A Q L+ MK+ G+ PT+
Sbjct: 469 -----KEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTIN 523
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++ CS I+ E L EM++ +SP YN Y+ A L ++M
Sbjct: 524 TFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEM 582
Query: 181 KEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
D+ V P+ TYN LI + ++ +++ + +K L + D+Y++LI G C+ +
Sbjct: 583 V--DMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLK 640
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ A ++ EM+E G LP L GL + L+ + +
Sbjct: 641 DFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSI 683
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 131/280 (46%), Gaps = 50/280 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +Y + K+ + +A M R V PNV YNVL+ G+C+
Sbjct: 64 PDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCK---------- 113
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK IR+AEK+F EM VR + P+ +F+ ++ Y +A + +++ MK++ + P++ T
Sbjct: 114 EKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIIT 173
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++ LC RIE+A +L E+ NG P TY+ F D GA
Sbjct: 174 FNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGA-------- 225
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT--MLIHGLCEKQ 239
+D+ RE G+ +D+YT +L++GLC++
Sbjct: 226 -----------------------ALDLYREAIGK------GVKIDNYTCSILLNGLCKEG 256
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRT 278
K ++A + ++E GL+P +V + T+ G Q DM R
Sbjct: 257 KVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRA 296
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 134/281 (47%), Gaps = 12/281 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ Y LI G+ ++ + L EM E G +PNV++Y L+N +C+
Sbjct: 345 PSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCK---------- 394
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ I AE V +M RG+ P+ +++++ K + +L + M + GI T+ T
Sbjct: 395 DGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVT 454
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++K LC G++++AEE+ + G P TYN Y ++ ++LY MK
Sbjct: 455 YNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMK 514
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L P I+T++ LI + + + ++N + L D Y +IH E
Sbjct: 515 KLGL-KPTINTFHPLIS-GCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHV 572
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++A EM++ G+ P T+ +L G ++ L + L
Sbjct: 573 QKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDL 613
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 128/292 (43%), Gaps = 27/292 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA----SLH 56
+PNV +Y LI G CK RI AE+ GEM R + PN VT+N L++G C+ ++
Sbjct: 98 VPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIG 157
Query: 57 PNERFEKT---------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
ER +K I A + +E++ G PD ++SI+
Sbjct: 158 LRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLL 217
Query: 96 RAHK-PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
++ +LD KG+ T + ++ LC G++E AEE+L +V +G+ P
Sbjct: 218 KSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGE 277
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
YN Y D + A+ QM+ L PN +N +I F + +D E
Sbjct: 278 VIYNTIVNGYCQIGDMDRAILTIEQMESRGL-RPNCIAFNSVIDKFCEMQMIDKAEEWVK 336
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ G + +++Y +LI G + Q EM E G P +++ +L
Sbjct: 337 KMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSL 388
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 135/302 (44%), Gaps = 27/302 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P++ + SL+ G CK RI+ A L E+ G P+ TY+++ +G+ +
Sbjct: 169 PSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALD 228
Query: 52 --RASLHPNERF--------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
R ++ + E + AE+V + G+ P ++ +++ Y
Sbjct: 229 LYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYC 288
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ ++ + M+ +G+ P + SV+ C I+ AEE + +MV G++PS E
Sbjct: 289 QIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVE 348
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN Y + ++ +M+E+ PN+ +Y LI ++ +
Sbjct: 349 TYNILIDGYGRLCVFSRCFQILEEMEENGE-KPNVISYGSLINCLCKDGKILEAEMVLRD 407
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ G + + + Y MLI G C K +EA ++F EM + G+ VT+ +L +GL +
Sbjct: 408 MVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGK 467
Query: 276 LR 277
L+
Sbjct: 468 LK 469
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +Y ++I+ + + + A EM++ GV P+ TYN L+ G + L
Sbjct: 554 PDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLS----- 608
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + D+M+ +G+ P+ ++S+++ + + M E G P V
Sbjct: 609 -----ETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCI 663
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+ L GR+++A+ + EM+ NG+
Sbjct: 664 CNELSTGLRKDGRLQEAQSICSEMIANGM 692
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 146/326 (44%), Gaps = 46/326 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +LI G CK +D A L ++ERG++PN VTY +L++G ++ +ER
Sbjct: 462 PSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGD---SER- 517
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN-FMK--------- 111
A VF++M I P +F+ V++ + + + DKLN F+K
Sbjct: 518 ------AFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSIT 571
Query: 112 -------------------------EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
E GI P V TYTS++ LC +I A E+ +M
Sbjct: 572 YNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMK 631
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G+ Y+ + D A K + ++ + L PN YN +I F+ LN M
Sbjct: 632 YKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGL-TPNTVVYNSMISGFIHLNNM 690
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + + +++ DL YT +I GL ++ K A + EM+ K ++P V + L
Sbjct: 691 EAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVL 750
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESIT 292
GL + L ++ K++D +IT
Sbjct: 751 INGLSNNGQLENASKILKEMDGNNIT 776
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 123/263 (46%), Gaps = 11/263 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y S+I G+ K +D A EM E G+ P+V+TY L++G+C+ I
Sbjct: 572 YNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCK----------SNKIG 621
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++ +M+ +G++ DV ++S ++ + + H + + + + G+ P Y S++
Sbjct: 622 LALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMI 681
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+E A L EM++N V + Y + A+ LY +M D+
Sbjct: 682 SGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDI- 740
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VP+I Y +LI +++ +I + G+ + + Y +LI G + +EA +
Sbjct: 741 VPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFR 800
Query: 247 YFVEMIEKGLLPQKVTFETLYRG 269
EM++KGL+P T++ L G
Sbjct: 801 LHDEMLDKGLVPDDTTYDILVNG 823
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 136/297 (45%), Gaps = 27/297 (9%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA--------- 53
NV + SL+ G+C + +++A + E++E GV P+VV ++VL+NG +
Sbjct: 324 NVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELY 383
Query: 54 ------SLHPN--------ERF--EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+ PN E F + + +A +FDE GI +V +++I+L
Sbjct: 384 TRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGEL 442
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
K + + M KGI P++ +Y +++ C G ++ A +L ++ G+ P+A TY
Sbjct: 443 GKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTY 502
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
+ + D+ A ++ QM ++ P HT+N +I R+ ++ N+
Sbjct: 503 TLLIDGFFKKGDSERAFVVFEQMMAANIA-PTDHTFNTVINGLGKTGRVSETQDKLNNFI 561
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+Y +I G ++ A + EM E G+ P +T+ +L GL +S+
Sbjct: 562 KQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSN 618
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 138/292 (47%), Gaps = 13/292 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + ++I G K R+ + L I++G +TYN +++G +
Sbjct: 532 PTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFK---------- 581
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +A + EM GI PDV +++ ++ +++K L+L+ + MK KG+ V
Sbjct: 582 EGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVA 641
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C +E A + E++ G++P+ YN + + A+ L+++M
Sbjct: 642 YSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMI 701
Query: 182 EDDLCVP-NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ VP ++ Y +IG + ++ + ++++ + ++ D+ YT+LI+GL +
Sbjct: 702 KNK--VPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQ 759
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ A + EM + P + + L G + L+ RL ++ ++ +
Sbjct: 760 LENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLV 811
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 102/195 (52%), Gaps = 11/195 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y++LI G+CK++ ++ A +F E+++ G+ PN V YN +++G +H N
Sbjct: 638 DVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGF-----IHLN---- 688
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A + EM + D+ ++ ++ + K L+LD + M K I P + Y
Sbjct: 689 -NMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMY 747
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++ L + G++E+A ++L EM N ++PS YN + A +L+ +M +
Sbjct: 748 TVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLD 807
Query: 183 DDLCVPNIHTYNILI 197
L VP+ TY+IL+
Sbjct: 808 KGL-VPDDTTYDILV 821
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 45/303 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V + +L+ + N + A + EM+ERG+ + T +V++ + +
Sbjct: 182 VPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEG------K 235
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
FE+ EK F E + RG+E D ++SI++ R L+ + L M+E G P+
Sbjct: 236 FEEV----EKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKG 291
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+V+ G +A L EMV G+ + K Y D N A++L+ ++
Sbjct: 292 TYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEV 351
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK----------------------- 217
E + VP++ +++LI + M+ E++ +K
Sbjct: 352 VEGGV-VPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNL 410
Query: 218 ----------GSELGL-DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
E G+ ++ +Y +L+ L E K EAC + +M+ KG+ P V++ L
Sbjct: 411 LEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNL 470
Query: 267 YRG 269
G
Sbjct: 471 ILG 473
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ MYT LI G +++ A + L EM + P+V+ YN+L+ G R
Sbjct: 741 VPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFR--------- 791
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
E ++ A ++ DEM +G+ PD T++ I+++
Sbjct: 792 -EGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 822
>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 578
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 135/278 (48%), Gaps = 11/278 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y L+ G+C N++ A + M+ERG +P+ +TY +L++G C +
Sbjct: 286 YNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC----------LIDKVD 335
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +F M RG+ PDV S++I++ Y + + +++ L M K + P + TY SVV
Sbjct: 336 EARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVV 395
Query: 127 KCLCSCGRIEDAEELLGEM-VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
LC G I DA +L+ EM P TYN + + A+ ++ + +
Sbjct: 396 DGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERS 455
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
PN+ +YNILI R+D ++NH+ L D+ +Y +L+ L Q+ +A
Sbjct: 456 FAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAI 515
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
V+++++G+ P T+ L GL + +T +++
Sbjct: 516 ALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKIS 553
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 137/292 (46%), Gaps = 17/292 (5%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
K TSL+ G+C N++D A MIERG + +++ YN+L+NG C
Sbjct: 249 KEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYC----------LNNK 298
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ A K+F M RG +PD +++I++H Y K + + + M E+G+ P V +Y
Sbjct: 299 VGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNI 358
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++K C R+ +A LL +M + P+ TYN G + G + ++ + E
Sbjct: 359 LIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVD---GLCKSGGILDAWKLVDEMH 415
Query: 185 LCV---PNIHTYNILIGMFMALNRMDMVREIWNH-VKGSELGLDLDSYTMLIHGLCEKQK 240
C P++ TYNIL+ + ++ + H + ++ SY +LI G C+ ++
Sbjct: 416 YCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRR 475
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EA F M K L+P VT+ L L L L ++ ++ I+
Sbjct: 476 LDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGIS 527
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 132/288 (45%), Gaps = 30/288 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + LI +C + ++D A +G++++ G PNVVT+ L+ G C
Sbjct: 86 VPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFC---------- 135
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH--VYSRAHKPQLSLDKLNFMKEKGIC-P 117
+ +A ++DEM R I D + +++ S+ KP+ ++ L M+E+ + P
Sbjct: 136 VNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKP 195
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF---------KEYRG-- 166
+ Y +VV LC G I +A L +M+ G+ P TY+ KE
Sbjct: 196 NLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLL 255
Query: 167 -----RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
+ A +L+ M E +I YNIL+ + N++ R++++ +
Sbjct: 256 NGFCLNNKVDEARELFNVMIERGE-QHDIINYNILMNGYCLNNKVGEARKLFHMMVERGE 314
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
D +YT+L+HG C K EA F MIE+GL+P ++ L +G
Sbjct: 315 QPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKG 362
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 15/239 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y LI G+CK R+ A L +M + + PN++TYN +++G+C+
Sbjct: 350 VPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGG------ 403
Query: 61 FEKTIRNAEKVFDEMR-VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL-NFMKEKGICPT 118
I +A K+ DEM PDVT+++I+L R + ++ + + E+ P
Sbjct: 404 ----ILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPN 459
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V +Y ++ C R+++A L M + P TYN + + A+ L
Sbjct: 460 VWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLV 519
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
Q+ + + PN+ TYNILI R ++I ++ S G D T +I+ LC+
Sbjct: 520 QIVDQGIS-PNLRTYNILINGLHKGGRPKTAQKISLYL--SIRGYHPDVKTYIINELCK 575
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 32/249 (12%)
Query: 45 LLNGVCRRASLH----PNERFEK--TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
LL RR LH P++ K +I +A +F M P + F+ +L ++
Sbjct: 9 LLMPYVRRIHLHSQPLPSQSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMR 68
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
++D M+ KG+ P T+ ++ C C G+++ A ++G++++ G P+ T+
Sbjct: 69 YYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFT 128
Query: 159 CFFKEYRGRKDANGAMKLY-----RQMKEDD---------LCVPNIHTYNILIGMFMALN 204
K + A+ +Y R+++ DD LC I + + +
Sbjct: 129 TLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKME 188
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+V+ +L Y ++HGLC+ EA +MI +G+ P T+
Sbjct: 189 ERQLVKP------------NLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYS 236
Query: 265 TLYRGLIQS 273
+L GL ++
Sbjct: 237 SLIYGLCRA 245
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 136/272 (50%), Gaps = 15/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +LI G+CKI +++ AE + +M RGV N + +N +++G CR+
Sbjct: 205 PNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRK--------- 255
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++ M GIE DV +++ + RA++ + + L M EKG+ P +
Sbjct: 256 -NMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVS 314
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C+ G + +A L EM NG PS TYN Y + A + +M+
Sbjct: 315 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME 374
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L VP+I++Y L+ ++D+ ++ +K +L +YT LI GL ++ +
Sbjct: 375 KKGL-VPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRS 433
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+EA Q + M+ GL P + LY L+ S
Sbjct: 434 EEAFQLYDNMLGDGLTPD----DALYSALVGS 461
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 26/307 (8%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS---------LHPNER 60
++ G+CK R+ A + L EM GV+ N + YN LL+ R + NE
Sbjct: 73 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 132
Query: 61 FEKT----------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL 104
E T I E VF+EM+ + + DV +S V++ Y RA + +
Sbjct: 133 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 192
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
+ + GI P TY +++ C G++E AE L+ +M GV + +N Y
Sbjct: 193 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 252
Query: 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
+ + A+++ M++ + + +++TYN L NRMD + + + + +
Sbjct: 253 CRKNMVDKALEIKMIMEKMGIEL-DVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN 311
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
SYT LI C + EA + F EM G P VT+ + G I+ +R R K
Sbjct: 312 HVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKN 371
Query: 285 KLDEESI 291
+++++ +
Sbjct: 372 EMEKKGL 378
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 10/170 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+LI C + A R EM G EP++VTYNV+++G ++ S+ ERF
Sbjct: 310 PNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERF 369
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +EM +G+ PD+ S++ ++H + K ++L MK++G P +
Sbjct: 370 K----------NEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVA 419
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
YT+++ L GR E+A +L M+ +G++P Y+ K N
Sbjct: 420 YTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQN 469
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y +L++G C ++D+A R EM +RG +PN+V Y L++G+ +
Sbjct: 379 VPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAK--------- 429
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
E A +++D M G+ PD +S ++
Sbjct: 430 -EGRSEEAFQLYDNMLGDGLTPDDALYSALV 459
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 127/274 (46%), Gaps = 15/274 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI C + A +M+ RG P+VVTY++LL+ C+
Sbjct: 158 PDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCK---------- 207
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A + DEMR +G EPD+ +++++++ +L LN + G P T
Sbjct: 208 ESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVT 267
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT V+K LCS R E+A++LL +M N +P T+N + A K+ QM
Sbjct: 268 YTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMS 327
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMD----MVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
E C P+I TY+ ++ R+D +++E+ + D ++ +I LC+
Sbjct: 328 EHG-CTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQ 386
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
K + A + EM E G +P T+ + G +
Sbjct: 387 KGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFL 420
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 134/288 (46%), Gaps = 21/288 (7%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +++ G+C+ ID A R + + P+ TYN L+ +C R +
Sbjct: 131 YNTMVNGYCRAGNIDAARRMIDSV---PFAPDTFTYNPLIRALCVRG----------CVL 177
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A VFD+M RG P V ++SI+L + + ++ L+ M+ KG P + TY ++
Sbjct: 178 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLI 237
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+CS G + +A ++L + G P A TY K + A KL +M +D C
Sbjct: 238 NAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSND-C 296
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC- 245
P+ T+N +I + ++ + D+ +Y+ ++ GLC++++ EA
Sbjct: 297 APDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIK 356
Query: 246 ---QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ EM+ K +P +VTF T+ L Q + + R K +DE S
Sbjct: 357 LLKELLAEMVSKNCIPDQVTFNTIITSLCQKGL---FDRAIKVVDEMS 401
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 121/283 (42%), Gaps = 23/283 (8%)
Query: 13 GWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
G + +D A R + + G +P V+ N+L+ +C + + +AE+V
Sbjct: 70 GLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCA----------DGRVADAERVV 119
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLS---LDKLNFMKEKGICPTVATYTSVVKCL 129
+ + G + +++ +++ Y RA + +D + F P TY +++ L
Sbjct: 120 EAL---GPSATIITYNTMVNGYCRAGNIDAARRMIDSVPFA------PDTFTYNPLIRAL 170
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C G + DA + +M+ G SPS TY+ A+ L +M+ C P+
Sbjct: 171 CVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKG-CEPD 229
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
I TYN+LI + + ++ N + D +YT ++ LC ++W+EA +
Sbjct: 230 IVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLT 289
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+M P +VTF + L Q + ++ ++ E T
Sbjct: 290 KMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCT 332
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 43/286 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + ++I C+ + A + L +M E G P+++TY+ +++G+C+ R
Sbjct: 298 PDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKE------RRV 351
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ I+ +++ EM + PD +F+ ++ + ++ ++ M E G P + T
Sbjct: 352 DEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITT 411
Query: 122 YTSVVKC-LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +V LC + E+A +LL MV NG+ P TY A L R
Sbjct: 412 YNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSL------------AFGLSR-- 457
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
ED++ IGMF V+ L D Y ++ GLC+K +
Sbjct: 458 -EDEM--------ERAIGMF-------------RRVQAMGLSPDKMLYNAILLGLCKKWR 495
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A +F M+ G +P + T+ L G+ L + L L
Sbjct: 496 TDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNL 541
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 26/171 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLL-------------- 46
+P+ + ++I C+ D A + + EM E G P++ TYN ++
Sbjct: 371 IPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEAL 430
Query: 47 --------NGVCRRASLHPNERF----EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
NG+C + + + F E + A +F ++ G+ PD ++ +L
Sbjct: 431 DLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGL 490
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
+ + L++D +M G P +TY +V+ + G +E+A+ELLG +
Sbjct: 491 CKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNL 541
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 136/272 (50%), Gaps = 15/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +LI G+CKI +++ AE + +M RGV N + +N +++G CR+
Sbjct: 281 PNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRK--------- 331
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++ M GIE DV +++ + RA++ + + L M EKG+ P +
Sbjct: 332 -NMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVS 390
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C+ G + +A L EM NG PS TYN Y + A + +M+
Sbjct: 391 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME 450
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L VP+I++Y L+ ++D+ ++ +K +L +YT LI GL ++ +
Sbjct: 451 KKGL-VPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRS 509
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+EA Q + M+ GL P + LY L+ S
Sbjct: 510 EEAFQLYDNMLGDGLTPD----DALYSALVGS 537
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 26/307 (8%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS---------LHPNER 60
++ G+CK R+ A + L EM GV+ N + YN LL+ R + NE
Sbjct: 149 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 208
Query: 61 FEKT----------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL 104
E T I E VF+EM+ + + DV +S V++ Y RA + +
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 268
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
+ + GI P TY +++ C G++E AE L+ +M GV + +N Y
Sbjct: 269 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328
Query: 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
+ + A+++ M++ + + +++TYN L NRMD + + + + +
Sbjct: 329 CRKNMVDKALEIKMIMEKMGIEL-DVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN 387
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
SYT LI C + EA + F EM G P VT+ + G I+ +R R K
Sbjct: 388 HVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKN 447
Query: 285 KLDEESI 291
+++++ +
Sbjct: 448 EMEKKGL 454
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 10/170 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+LI C + A R EM G EP++VTYNV+++G ++ S+ ERF
Sbjct: 386 PNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERF 445
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +EM +G+ PD+ S++ ++H + K ++L MK++G P +
Sbjct: 446 K----------NEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVA 495
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
YT+++ L GR E+A +L M+ +G++P Y+ K N
Sbjct: 496 YTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQN 545
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y +L++G C ++D+A R EM +RG +PN+V Y L++G+ +
Sbjct: 455 VPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAK--------- 505
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
E A +++D M G+ PD +S ++
Sbjct: 506 -EGRSEEAFQLYDNMLGDGLTPDDALYSALV 535
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 133/275 (48%), Gaps = 14/275 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEM--IERGVEPNVVTYNVLLNGVCRRASLHPNE 59
P + + +I G CK I+ A R + EM IE G+ P+V+T+N +L+G+C+
Sbjct: 169 PELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCK-------- 220
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
E+ I +A VF RG P+V ++S ++ S+ K +L L M E G
Sbjct: 221 --EQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANT 278
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY++VV L GR+EDA +L +M G P A TYN + R+ A+ L R+
Sbjct: 279 VTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 338
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E P++ TY L R D EI +++ + +Y+ ++ GLC+
Sbjct: 339 MLEAGF-HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAG 397
Query: 240 KWKEACQYFVEMI-EKGLLPQKVTFETLYRGLIQS 273
+ EA YF +M ++ + P + + L GL ++
Sbjct: 398 RVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKA 432
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 129/274 (47%), Gaps = 13/274 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y++LI G C+ + +D + L EM RG PN VTYN L+N + + E F
Sbjct: 99 PTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQG--RSKEAF 156
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN--FMKEKGICPTV 119
+ ++M G P++ +F +++ + + + + ++ FM E G+ P V
Sbjct: 157 --------SLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDV 208
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+ SV+ LC RI DA + + G P+ TY+ + A++L +
Sbjct: 209 ITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAK 268
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E C N TY+ ++ + + RM+ + ++ + D +Y LI G ++Q
Sbjct: 269 MVELG-CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQ 327
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ +EA EM+E G P VT+ TL GL +S
Sbjct: 328 RLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRS 361
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 145/324 (44%), Gaps = 48/324 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y++LI G K+ ++D A + L +M+E G N VTY+ +++G+ + +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME----- 295
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A V +MR G PD +++ ++ + + + + ++ L M E G P+V T
Sbjct: 296 -----DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVT 350
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++ LC GR ++A E+L M G +P+A TY+ A+ + +M
Sbjct: 351 YTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMA 410
Query: 182 EDD---------------LC--------------------VPNIHTYNILIGMFMALNRM 206
D+ LC +P++ T++ILI R+
Sbjct: 411 RDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRI 470
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D E++ + D+ +Y L+ LC + EA F +M GL P + T T+
Sbjct: 471 DTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTM 530
Query: 267 YRGLIQSDMLRTWRRLKKKLDEES 290
GL++ + +R++ DEE+
Sbjct: 531 IHGLLEVNRDEDAKRIQ---DEEN 551
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 123/245 (50%), Gaps = 12/245 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +LI G+ K R+ A L EM+E G P+VVTY L +G+CR R
Sbjct: 310 LPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSG------R 363
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFM-KEKGICPTV 119
F++ + ++ D M RG P+ ++S ++ +A + +L M +++ + P V
Sbjct: 364 FDEAV----EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 419
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y++++ LC G+I++A E L M+R G P T++ + ++L+R
Sbjct: 420 IAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRG 479
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E CVP++ TY L+ +R+D +++ ++ L D + +IHGL E
Sbjct: 480 MAERG-CVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVN 538
Query: 240 KWKEA 244
+ ++A
Sbjct: 539 RDEDA 543
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 132/264 (50%), Gaps = 14/264 (5%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
+I G CK ++D A +M+++ + P+VVTY L++G+ + ++ ++ A
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGK----------QRRVKEAY 50
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK-EKGICPTVATYTSVVKC 128
+F+E R +G P V +++ ++ + + + +L + M G PTV TY++++
Sbjct: 51 DLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDG 110
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC ++ +LL EM G +P+A TYN G+ + A L QM + C P
Sbjct: 111 LCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANG-CPP 169
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKEACQ 246
+ T+ ++I ++ + + + E GL D+ ++ ++ GLC++Q+ +A
Sbjct: 170 ELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHN 229
Query: 247 YFVEMIEKGLLPQKVTFETLYRGL 270
F +E+G P VT+ TL GL
Sbjct: 230 VFKRALERGCRPNVVTYSTLIDGL 253
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 122/274 (44%), Gaps = 14/274 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G K R+ A E +G P VVTYN +++G+C+
Sbjct: 28 PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGR------- 80
Query: 62 EKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I NA ++D+M + G P V ++S ++ R H+ L M +G P
Sbjct: 81 ---IENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAV 137
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ- 179
TY ++V L GR ++A LL +M NG P T+ K + A ++ +
Sbjct: 138 TYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEM 197
Query: 180 -MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M E L P++ T+N ++ R+ ++ ++ +Y+ LI GL +
Sbjct: 198 FMIESGLS-PDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKM 256
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
K EA Q +M+E G VT+ T+ GL++
Sbjct: 257 AKMDEALQLLAKMVELGCRANTVTYSTVVDGLLK 290
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 45 LLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL 104
+++G+C+ + + A +F +M + I PDV ++ ++ + + + +
Sbjct: 1 MIDGLCK----------SRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAY 50
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM-VRNGVSPSAETYNCFFKE 163
D + KG PTV TY +++ LC CGRIE+A L +M + G P+ TY+
Sbjct: 51 DLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDG 110
Query: 164 YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223
+ + KL +M C PN TYN L+ + R + + +
Sbjct: 111 LCRDHEVDKGCKLLEEMAGRG-CAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPP 169
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVE--MIEKGLLPQKVTFETLYRGLIQ 272
+L ++ ++I GLC++ + + A + E MIE GL P +TF ++ GL +
Sbjct: 170 ELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCK 220
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 130/299 (43%), Gaps = 45/299 (15%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLN--------------- 47
+V YTSLI + R A +M E G +P ++TYNV+LN
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 48 -------GV-------------CRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSF 87
G+ C+R SLH + A +VF+EM+ G D ++
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLH---------QEAAQVFEEMKAAGFSYDKVTY 317
Query: 88 SIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147
+ +L VY ++H+P+ ++ LN M G P++ TY S++ G +++A EL +M
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
G P TY + AM ++ +M+ C PNI T+N I M+ +
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFT 436
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ +I++ + L D+ ++ L+ + E F EM G +P++ TF TL
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 12/249 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y SL++ + I + E+ +EP V L+ VC + L P
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL-VCSKCDLLPE--- 612
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE+ F E++ RG PD+T+ + ++ +Y R + L++MKE+G P++AT
Sbjct: 613 ------AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMAT 666
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ +EE+L E++ G+ P +YN Y A +++ +M+
Sbjct: 667 YNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR 726
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ VP++ TYN IG + A + + + ++ + ++Y ++ G C+ +
Sbjct: 727 NSGI-VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRK 785
Query: 242 KEACQYFVE 250
EA + FVE
Sbjct: 786 DEA-KLFVE 793
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 121/291 (41%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SLI + + +D A +M E+G +P+V TY LL+G R
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK------- 399
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A +F+EMR G +P++ +F+ + +Y K + + + G+ P + T
Sbjct: 400 ---VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVT 456
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ G + + EM R G P ET+N Y AM +YR+M
Sbjct: 457 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML 516
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D P++ TYN ++ + ++ ++ + +Y L+H ++
Sbjct: 517 -DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
E+ + P+ V +TL + D+L R +L E +
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFS 626
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 107/266 (40%), Gaps = 11/266 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + + +LI + + + A M++ GV P++ TYN +L + R
Sbjct: 486 VPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE---- 541
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+EKV EM +P+ ++ +LH Y+ + L + I P
Sbjct: 542 ------QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAV 595
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++V C + +AE E+ G SP T N Y R+ A + M
Sbjct: 596 LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM 655
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
KE P++ TYN L+ M EI + + D+ SY +I+ C +
Sbjct: 656 KERGF-TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
++A + F EM G++P +T+ T
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTF 740
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 4/209 (1%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
D + +I++ + + + + + N ++E G V +YTS++ + GR +A +
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDA--NGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
+M +G P+ TYN + G+ N L +MK D + P+ +TYN LI
Sbjct: 232 KKMEEDGCKPTLITYNVILNVF-GKMGTPWNKITSLVEKMKSDGIA-PDAYTYNTLITCC 289
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+ +++ +K + D +Y L+ + + KEA + EM+ G P
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI 349
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
VT+ +L + ML LK ++ E+
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEK 378
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 92/210 (43%), Gaps = 2/210 (0%)
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +A +F+ ++ G DV S++ ++ ++ + + + +++ M+E G PT+ T
Sbjct: 186 EGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLIT 245
Query: 122 YTSVVKCLCSCGRI-EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ G L+ +M +G++P A TYN + A +++ +M
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM 305
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K + TYN L+ ++ +R ++ N + + + +Y LI
Sbjct: 306 KAAGFSYDKV-TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA + +M EKG P T+ TL G
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
>gi|356551785|ref|XP_003544254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g09900-like [Glycine max]
Length = 603
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 129/269 (47%), Gaps = 16/269 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT LI CK +R+ A + L EM+ + +PNVVTYN L+ G+C L RF
Sbjct: 258 PDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICNEGRLDEVIRF 317
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + + G +PDV S++IVLH S + ++ L M KG V T
Sbjct: 318 LKNLPS----------YGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVT 367
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ LC G + A +L + ++ +P++ +YN + K Y ++
Sbjct: 368 FNTLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFCNEKSX------YLEIM 421
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P+I TYNIL+ ++D EI + L D+ +Y+++I GL + K
Sbjct: 422 VSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKT 481
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A + E KGL P +TF ++ G+
Sbjct: 482 DLALELLEEACTKGLKPNLITFTSVVGGI 510
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y I G+C + +L M+ RG P++VTYN+LL +C+
Sbjct: 398 PNSISYNPSIGGFC-----NEKSXYLEIMVSRGCYPDIVTYNILLAALCK---------- 442
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + +A ++ ++ +G++PDV ++SI++ + K L+L+ L KG+ P + T
Sbjct: 443 DRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKTDLALELLEEACTKGLKPNLIT 502
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+TSVV + G++ +A ++ + G+ P+A YN M L + +
Sbjct: 503 FTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLII------------MGLCKTQQ 550
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
C P TYNIL+ + ++W+ +
Sbjct: 551 TSRGCKPTEATYNILVKGITSEGXPKEASKLWSEL 585
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 110/285 (38%), Gaps = 58/285 (20%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYN---------VLLNGVCR 51
MP V T+LI +CKI R A R +G + E G ++ YN VL+ G C
Sbjct: 146 MPCVIACTALISEFCKIGRTKNATRIMGILEESGAVIDITIYNFFCLPKKNNVLIGGYCX 205
Query: 52 RASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK 111
+ A +V D M V P+ ++ +L K + ++ L+
Sbjct: 206 SGE----------VEEALRVLDCMSV---SPNGINYDTILRSLCDRCKLKQGMEVLDRQL 252
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
+ P V TYT ++ C R+ A +LL EMV
Sbjct: 253 QIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVS------------------------ 288
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
KE C PN+ TYN LI R+D V ++ D+ SYT++
Sbjct: 289 ---------KE---CKPNVVTYNALIKGICNEGRLDEVIRFLKNLPSYGYQPDVISYTIV 336
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+H L +W +A + M+ KG VTF TL L Q +L
Sbjct: 337 LHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLINFLCQKGLL 381
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 32/274 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+V YT +++ R A + L M+ +G NVVT+N L+N +C++ L
Sbjct: 328 PDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLINFLCQKGLLGKAFNV 387
Query: 56 ---------HPNE-RFEKTIR---NAEKVFDEMRV-RGIEPDVTSFSIVLHVYSRAHKPQ 101
PN + +I N + + E+ V RG PD+ +++I+L + K
Sbjct: 388 LEMIXKHVCTPNSISYNPSIGGFCNEKSXYLEIMVSRGCYPDIVTYNILLAALCKDRKVD 447
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
+++ L + KG+ P V TY+ ++ L G+ + A ELL E G+ P+ T+
Sbjct: 448 DAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKTDLALELLEEACTKGLKPNLITFTSVV 507
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
+ + A+K++ ++ + PN YN++I M L + ++ K +E
Sbjct: 508 GGISRKGKVHEAIKIFHFLEGLGI-RPNAFAYNLII---MGLCK---TQQTSRGCKPTE- 559
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
+Y +L+ G+ + KEA + + E+ KG
Sbjct: 560 ----ATYNILVKGITSEGXPKEASKLWSELYSKG 589
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 100/259 (38%), Gaps = 28/259 (10%)
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVT---SFSIVLHVYSRAHKPQLSLDKLNFMKEKG- 114
+RFE+ + A + G+ + S LHV + + + L +M KG
Sbjct: 85 QRFERLPKGALNGVESSSANGVNTSLNFEESEIHHLHVLIKNGELDEASRFLEYMTNKGN 144
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF---------FKEYR 165
I P V T+++ C GR ++A ++G + +G YN F Y
Sbjct: 145 IMPCVIACTALISEFCKIGRTKNATRIMGILEESGAVIDITIYNFFCLPKKNNVLIGGYC 204
Query: 166 GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL 225
+ A+++ M PN Y+ ++ ++ E+ + + D+
Sbjct: 205 XSGEVEEALRVLDCMSVS----PNGINYDTILRSLCDRCKLKQGMEVLDRQLQIKCYPDV 260
Query: 226 DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK 285
+YT LI C+ + +A + +EM+ K P VT+ L +G+ L
Sbjct: 261 VTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICNEGRL--------- 311
Query: 286 LDEESITFGSEFQNYHFKP 304
+E I F +Y ++P
Sbjct: 312 --DEVIRFLKNLPSYGYQP 328
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 135/269 (50%), Gaps = 11/269 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y LI G CK +ID A R EM + P+VVTYN L+NG +S
Sbjct: 314 LPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSS------ 367
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+++ E + D+M +G++P+ ++++V+ Y + K + ++L M+E G P
Sbjct: 368 ---SLKGFE-LIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCV 423
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ +++ C GR+ +A ++ EM R G+ ++ T N G + + A KL
Sbjct: 424 TFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSA 483
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ V + +++G F ++ ++ +W+ +K E+ + +Y +I GLC K
Sbjct: 484 SKRGYFVDEVSYGTLIMGYFKDGKSVEAMK-LWDEMKEKEIIPSIITYNTMIGGLCHSGK 542
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ E++E GL+P + T+ T+ G
Sbjct: 543 TDQSIDKLNELLESGLVPDETTYNTIILG 571
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 125/270 (46%), Gaps = 15/270 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + LIYG C N++ A +G+M + P+ V+YN +L+ +C++ L+
Sbjct: 211 NTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLN------ 264
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A + +M+ G+ P+ +F+I++ Y + + + ++ M + + P V TY
Sbjct: 265 ----EARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTY 320
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK- 181
++ LC G+I++A L EM + P TYN G D + ++K + +
Sbjct: 321 NMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLI---NGCFDCSSSLKGFELIDK 377
Query: 182 -EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E PN TYN+++ ++ +MD ++ S D ++ LI+G C+ +
Sbjct: 378 MEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGR 437
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA + EM KGL VT T+ L
Sbjct: 438 LSEAFRMMDEMSRKGLKMNSVTLNTILHTL 467
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 126/285 (44%), Gaps = 26/285 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +LI G+CK R+ A R + EM +G++ N VT N +L+ +C L +
Sbjct: 420 PDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKL 479
Query: 62 EKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ A K++DEM+ + I P + +++ ++
Sbjct: 480 LSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCH 539
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ K S+DKLN + E G+ P TY +++ C G++E A + +MV+ P T
Sbjct: 540 SGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFT 599
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
N + + A+KL+ + + TYN +I +R + ++ +
Sbjct: 600 CNILLRGLCTEGMLDKALKLFNTWISKGKAIDAV-TYNTIISGLCKEDRFEEAFDLLAEM 658
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
+ +LG D +Y ++ L + + KEA ++ ++E+G L +
Sbjct: 659 EEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQT 703
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 134/290 (46%), Gaps = 19/290 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +++ CK +++ A L +M G+ PN T+N+L++G C+ L
Sbjct: 245 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWL------ 298
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +V D M + PDV ++++++ + K + + M+ + P V T
Sbjct: 299 ----KEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVT 354
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C EL+ +M GV P+A TYN K Y + A R+M+
Sbjct: 355 YNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKME 414
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM--LIHGLCEKQ 239
E P+ T+N LI + R+ + + + S GL ++S T+ ++H LC ++
Sbjct: 415 ESGFS-PDCVTFNTLINGYCKAGRLSEAFRMMDEM--SRKGLKMNSVTLNTILHTLCGER 471
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK 285
K +A + ++G +V++ TL G + + ++ W +K+K
Sbjct: 472 KLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEK 521
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 138/295 (46%), Gaps = 13/295 (4%)
Query: 11 IYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEK 70
I + NR A + M ++PN++T N L+N + R S P+ K I
Sbjct: 146 IGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPS-KPSVYLSKAI----- 199
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
F ++ G++ + +F+I+++ +K ++ + MK+ P +Y +++ LC
Sbjct: 200 -FSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLC 258
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
G++ +A +LL +M NG+ P+ T+N Y A ++ M ++++ +P++
Sbjct: 259 KKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNV-LPDV 317
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
TYN+LIG ++D + + ++ +L D+ +Y LI+G + + + +
Sbjct: 318 WTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDK 377
Query: 251 MIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFGSEFQNY 300
M KG+ P VT+ + + ++ + +K++E + +TF + Y
Sbjct: 378 MEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGY 432
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 124/275 (45%), Gaps = 13/275 (4%)
Query: 22 MAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE 81
+++ ++I+ GV+ N T+N+L+ G C E + A + +M+
Sbjct: 195 LSKAIFSDVIKLGVKVNTNTFNILIYGCC----------IENKLSEAIGLIGKMKDFSCF 244
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
PD S++ +L V + K + D L MK G+ P T+ +V C G +++A ++
Sbjct: 245 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQV 304
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMF 200
+ M +N V P TYN + A +L +M+ L +P++ TYN LI G F
Sbjct: 305 IDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKL-LPDVVTYNTLINGCF 363
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+ + E+ + ++G + + +Y +++ ++ K A +M E G P
Sbjct: 364 DCSSSLKGF-ELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDC 422
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
VTF TL G ++ L R+ ++ + + S
Sbjct: 423 VTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNS 457
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I G+C+ +++ A +F +M+++ +P++ T N+LL G+C
Sbjct: 559 VPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCT--------- 609
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A K+F+ +G D +++ ++ + + + + D L M+EK + P
Sbjct: 610 -EGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCY 668
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
TY +++ L GR+++AEE + +V G
Sbjct: 669 TYNAILSALADAGRMKEAEEFMSRIVEQG 697
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 22/151 (14%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y ++I G CK +R + A L EM E+ + P+ TYN +L+ + + E F I
Sbjct: 635 YNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIV 694
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
K+ D+ + S+ + + D P T++ +
Sbjct: 695 EQGKLQDQ-----------TISLNKRKIESSSETSQESD-----------PNSVTFSEQI 732
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
LC+ G+ +DA ++ E + G++ TY
Sbjct: 733 NELCTQGKYKDAMHMVQESTQKGITLHKSTY 763
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 139/264 (52%), Gaps = 12/264 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT LI G + R+D A +M+++ +P+V+TY L++G+C+ K
Sbjct: 555 YTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKL----------KKSS 604
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+FD M + PD+ ++++++++SR + +L + E+G P V T+ +++
Sbjct: 605 AGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMI 664
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C C+ R++DA +L +M + P+A T+ + + AM ++ +M E+
Sbjct: 665 CCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGP- 723
Query: 187 VPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
PN+ TY+ LI G F + + M+ +++N + + + ++ SY++LI GLC++ KEA
Sbjct: 724 EPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEAS 783
Query: 246 QYFVEMIEKGLLPQKVTFETLYRG 269
F ++K LLP + + L RG
Sbjct: 784 CAFRCALDKHLLPDVIAYTILIRG 807
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 12/292 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +Y+ LI G CK + A RF + + RG+ PNV T N LL+ CR
Sbjct: 480 PDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRL--------- 530
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K I A KV+ M + I+ D +++I++ ++ + +L M +K P V T
Sbjct: 531 -KCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVIT 589
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC + + M +N V+P YN + A+ L+ +
Sbjct: 590 YCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVV 649
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E P++ T+N +I + R+D +++ + +L + ++T+LI C + +
Sbjct: 650 ERGP-KPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRM 708
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRLKKKLDEESIT 292
+A F +M+E+G P VT+ L G +S M+ + +L ++ E +I
Sbjct: 709 DDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIA 760
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 12/266 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G CK+ + M + V P++ YNVL+N R L
Sbjct: 585 PDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEA---- 640
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F + RG +PDV +F+ ++ Y + ++ M + + P T
Sbjct: 641 ------ALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAIT 694
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQM 180
+T ++ C GR++DA + +M+ G P+ TY+C Y + + +KLY +M
Sbjct: 695 FTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEM 754
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E+++ PNI +Y+ILI M + L D+ +YT+LI G C+ +
Sbjct: 755 LENNI-APNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGR 813
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
EA + M+ L P + TL
Sbjct: 814 LTEAMMLYDNMLLNRLTPDRFLERTL 839
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 126/294 (42%), Gaps = 26/294 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
PNV +++LI +CK +D A M GV P+++ Y++L++G+ + L +R
Sbjct: 305 PNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRL 364
Query: 61 ---------------FEKTIRNAEKVFDEMRV---------RGIEPDVTSFSIVLHVYSR 96
F + K+ D RV GI P+V S SI++ + +
Sbjct: 365 LLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQ 424
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + + G P++ TY++++ C G + D L +M++ P
Sbjct: 425 NGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIV 484
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ + A++ + Q L PN+ T N L+ F L + +++ +
Sbjct: 485 YSVLINGLCKQGLVGDALRFFFQAVNRGLS-PNVFTLNTLLDSFCRLKCIVGAMKVYYLM 543
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ D +YT+LI G + + EA F +M++K P +T+ TL GL
Sbjct: 544 GMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGL 597
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 113/249 (45%), Gaps = 11/249 (4%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
N I +A+ + ++ G +PNVVT++ L++ C+ E + A +FD M
Sbjct: 286 NDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCK----------EGNLDKAFVLFDVMAG 335
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
G+ PD+ +SI++ +A + + L +KGI V ++S + G +
Sbjct: 336 NGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGR 395
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
++ M+ G+SP+ + + K + A L+ Q+ + P+I TY+ LI
Sbjct: 396 VIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGF-EPSILTYSALI 454
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
F + ++ + D Y++LI+GLC++ +A ++F + + +GL
Sbjct: 455 AGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLS 514
Query: 258 PQKVTFETL 266
P T TL
Sbjct: 515 PNVFTLNTL 523
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 118/265 (44%), Gaps = 15/265 (5%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
++M RF +++ G +++T N +L G+ + I A+ F+ + G
Sbjct: 253 VEMGLRFHKALVQGGFGLDIITCNKILKGI----------WMQNDIGVADDYFNMVVRIG 302
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
+P+V +FS ++ Y + + + M G+ P + Y+ ++ L GR+ED +
Sbjct: 303 PKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQ 362
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
LL + G+ ++ Y D +++Y++M + + PN+ + +ILI
Sbjct: 363 RLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGIS-PNVVSCSILIKG 421
Query: 200 FMALNRMDMVREIWNHVKGSELGLD--LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
F R ++ V+ +LG + + +Y+ LI G C+ ++ + +MI+K
Sbjct: 422 FCQNGR--ILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCE 479
Query: 258 PQKVTFETLYRGLIQSDMLRTWRRL 282
P + + L GL + ++ R
Sbjct: 480 PDTIVYSVLINGLCKQGLVGDALRF 504
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 142/291 (48%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V +YTS+I C+ + A EM ++G+ P+ TY L++GVC+ +
Sbjct: 332 ADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEA---- 387
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ + +EM+ +GI+ + F+ ++ Y + +L M++KG+ V
Sbjct: 388 ------AQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFA 441
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+ LC R ++A+ LL MV GVSP+ ++ Y + A +++R+M+
Sbjct: 442 YNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREME 501
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E VPNI TYN+LI + M ++ + ++ L D+ + T LIHG C K
Sbjct: 502 EKG-NVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKV 560
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + F EM ++GL+P VT+ + GL + +L ++ E +T
Sbjct: 561 DMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLT 611
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 144/310 (46%), Gaps = 28/310 (9%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------------ 55
T ++ G CK ++M + + E+ +GV+ NVVTYN + G +R L
Sbjct: 233 TIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK 292
Query: 56 --------------HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
H K I A+++F+EMR +GIE DV ++ ++ R+ +
Sbjct: 293 EGVACNVVTYTLLIHGFSNIGK-IEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 351
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
+L + M +KG+ P+ TY +++ +C G++E A+ L+ EM G+ + +N
Sbjct: 352 RALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI 411
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
Y + A++L M++ L ++ YN + LNR D + + + +
Sbjct: 412 DGYCESGMVDEALRLQVVMEKKGL-ESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGV 470
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 281
+ S+T LI C++ + EA + F EM EKG +P +T+ L G + ++ +
Sbjct: 471 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK 530
Query: 282 LKKKLDEESI 291
LK +L+ +
Sbjct: 531 LKDELENRGL 540
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 133/274 (48%), Gaps = 11/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +LI+G CK +++ A+ + EM +G++ N V +N L++G C + R
Sbjct: 366 IPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALR 425
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ M +G+E DV +++ + + ++ + L M E+G+ P
Sbjct: 426 LQVV----------MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTM 475
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++T+++ C G +A+ + EM G P+ TYN Y R + A KL ++
Sbjct: 476 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 535
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L +P+++T LI ++DM ++++ + L ++ +YT +I GL + +
Sbjct: 536 ENRGL-IPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGR 594
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+EA + + EM E GL P + +L L +D
Sbjct: 595 SEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSAD 628
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 133/327 (40%), Gaps = 29/327 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAER----------FLGEMIERGVEPNVVTYNVLLNGVCR 51
P+++ Y +LI+ + + D + F ++ G+ V L++ C
Sbjct: 89 PDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACN 148
Query: 52 RASLHP---NERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
+ + E+F K A + F+ M +G D S + L R
Sbjct: 149 ESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGG 208
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
+ L M + TV + T V+ LC G +E +L+ E+ GV + TYN
Sbjct: 209 QVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYN 268
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
F + Y R D G ++ M+++ + N+ TY +LI F + +++ + ++ ++
Sbjct: 269 AFIEGYFKRLDLGGVAEILTLMEKEGVAC-NVVTYTLLIHGFSNIGKIEEAQRLFEEMRE 327
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
+ D+ YT +I C K A F EM +KGL+P T+ L G+ ++ +
Sbjct: 328 KGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEA 387
Query: 279 WRRL-----KKKLDEESITFGSEFQNY 300
+ L K +D + F + Y
Sbjct: 388 AQMLVNEMQGKGIDLNPVIFNTLIDGY 414
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 143/285 (50%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +K+Y LI G+ +++ +++A EM G P+ TYN L++ + + NE F
Sbjct: 788 PTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKI--NELF 845
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ ++DEM RG +P+ ++++V+ ++++ ++D + PT T
Sbjct: 846 D--------LYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCT 897
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ L GR++DA E+ MV G P++ YN Y + A + +++M
Sbjct: 898 FGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMV 957
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + P++ +Y IL+ + R+D + +K + L DL +Y ++I+GL Q+
Sbjct: 958 KEGI-RPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRT 1016
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+EA F EM +G++P T+ +L L M+ ++ ++L
Sbjct: 1017 EEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEEL 1061
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 140/298 (46%), Gaps = 28/298 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
PN+ YT I + +ID A R + M + G P+VVTY VL++ +C
Sbjct: 262 PNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCL 321
Query: 51 ----RRASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ +S P++ T+ + EK++ EM G PDV +F+I+++ +
Sbjct: 322 FTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCK 381
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + D L+ M+++G+ P + TY +++ L R++DA +L M GV P+A T
Sbjct: 382 AGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYT 441
Query: 157 YNCFFKEYRGRKDANG-AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
Y +Y G+ G A++ + +MK + PNI N + + R+ + ++N
Sbjct: 442 Y-ILLIDYHGKSGHPGKALETFEKMKARGI-APNIVACNASLYSLAEMGRLGEAKAMFNE 499
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+K S L D +Y M++ + + EA + EM + P + +L L ++
Sbjct: 500 LKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKA 557
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 137/299 (45%), Gaps = 19/299 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y +LI G + NR+D A M GVEP TY +L++ S HP +
Sbjct: 401 LPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLID--YHGKSGHPGKA 458
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF--MKEKGICPT 118
E F++M+ RGI P++ + + L YS A +L K F +K G+ P
Sbjct: 459 LE--------TFEKMKARGIAPNIVACNASL--YSLAEMGRLGEAKAMFNELKSSGLAPD 508
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
TY ++KC G++++A +LL EM + P N A +++
Sbjct: 509 SVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFC 568
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M+E +L P + TYNIL+ ++ +++ + G + ++ L+ LC+
Sbjct: 569 RMEEMNL-APTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKN 627
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT----WRRLKKKLDEESITF 293
+ A + F +M P +TF T+ G I+ + ++ + ++KK L + +T
Sbjct: 628 DEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTL 686
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +Y L+ G+ K+ +D A F M++ G+ P++ +Y +L++ +C
Sbjct: 928 PNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILC----------I 977
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A F++++ G++PD+ +++++++ R+ + + +L + M+ +GI P + T
Sbjct: 978 AGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYT 1037
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ L G IE+A ++ E+ G+ P+ TYN + Y ++ A +Y++M
Sbjct: 1038 YNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMM 1097
Query: 182 EDDLCVPNIHTY 193
C PN T+
Sbjct: 1098 VGG-CDPNTGTF 1108
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +I K NR+D A ++ P T+ L++G+ + L
Sbjct: 858 PNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLD----- 912
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++FD M G P+ ++I+++ Y + + + M ++GI P + +
Sbjct: 913 -----DAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKS 967
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +V LC GR++DA ++ + G+ P YN + A+ L+ +M+
Sbjct: 968 YTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQ 1027
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ VP+++TYN LI + ++ +I+ ++ L ++ +Y LI G
Sbjct: 1028 NRGI-VPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNS 1086
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+ A + +M+ G P TF L
Sbjct: 1087 ELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 120/266 (45%), Gaps = 21/266 (7%)
Query: 3 NVKMYTSLIY-----GWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP 57
N Y LI+ G+CK +++ R M+ G++P++ T++ L+ +R
Sbjct: 193 NAYSYNGLIHFLLQSGFCK-EALEVYRR----MVSEGLKPSLKTFSALMVASGKR----- 242
Query: 58 NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
+ I+ + +EM G+ P++ +++I + V R K + + M + G P
Sbjct: 243 -----RNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGP 297
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V TYT ++ LC+ +++DA L +M + P TY ++ + K++
Sbjct: 298 DVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIW 357
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+M+ D P++ T+ IL+ R++ ++ + ++ + +L +Y LI GL
Sbjct: 358 TEMEADGY-APDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLR 416
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTF 263
+ +A F M G+ P T+
Sbjct: 417 ANRLDDALDLFSNMESLGVEPTAYTY 442
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 133/317 (41%), Gaps = 54/317 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRI-----DMAERFLGEMIERGV-EPNVVTYNVLLNGVCRRAS 54
+PNV T +I R+ DMA F+ ++++R + NV TY ++ + R
Sbjct: 117 LPNVVHTTETCNHMLEILRVHRRVEDMA--FVFDLMQRQIIRRNVDTYLIIFKSLFIRGG 174
Query: 55 LHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG 114
L R A ++MR G + S++ ++H ++ + +L+ M +G
Sbjct: 175 L----------RQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEG 224
Query: 115 ICPT-----------------------------------VATYTSVVKCLCSCGRIEDAE 139
+ P+ + TYT ++ L G+I++A
Sbjct: 225 LKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAY 284
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
++ M +G P TY + + AM L+ +MK P+ TY L+
Sbjct: 285 RIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSS-HKPDKVTYVTLLDK 343
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
F +D V +IW ++ D+ ++T+L++ LC+ + EA M ++G+LP
Sbjct: 344 FSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPN 403
Query: 260 KVTFETLYRGLIQSDML 276
T+ TL GL++++ L
Sbjct: 404 LHTYNTLISGLLRANRL 420
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 142/291 (48%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V +YTS+I C+ + A EM ++G+ P+ TY L++GVC+ +
Sbjct: 328 ADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEA---- 383
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ + +EM+ +GI+ + F+ ++ Y + +L M++KG+ V
Sbjct: 384 ------AQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFA 437
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+ LC R ++A+ LL MV GVSP+ ++ Y + A +++R+M+
Sbjct: 438 YNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREME 497
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E VPNI TYN+LI + M ++ + ++ L D+ + T LIHG C K
Sbjct: 498 EKG-NVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKV 556
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + F EM ++GL+P VT+ + GL + +L ++ E +T
Sbjct: 557 DMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLT 607
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 144/310 (46%), Gaps = 28/310 (9%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------------ 55
T ++ G CK ++M + + E+ +GV+ NVVTYN + G +R L
Sbjct: 229 TIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK 288
Query: 56 --------------HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
H K I A+++F+EMR +GIE DV ++ ++ R+ +
Sbjct: 289 EGVACNVVTYTLLIHGFSNIGK-IEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 347
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
+L + M +KG+ P+ TY +++ +C G++E A+ L+ EM G+ + +N
Sbjct: 348 RALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI 407
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
Y + A++L M++ L ++ YN + LNR D + + + +
Sbjct: 408 DGYCESGMVDEALRLQVVMEKKGL-ESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGV 466
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 281
+ S+T LI C++ + EA + F EM EKG +P +T+ L G + ++ +
Sbjct: 467 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK 526
Query: 282 LKKKLDEESI 291
LK +L+ +
Sbjct: 527 LKDELENRGL 536
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 131/270 (48%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +LI+G CK +++ A+ + EM +G++ N V +N L++G C + R
Sbjct: 362 IPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALR 421
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ M +G+E DV +++ + + ++ + L M E+G+ P
Sbjct: 422 LQVV----------MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTM 471
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++T+++ C G +A+ + EM G P+ TYN Y R + A KL ++
Sbjct: 472 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 531
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L +P+++T LI ++DM ++++ + L ++ +YT +I GL + +
Sbjct: 532 ENRGL-IPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGR 590
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+EA + + EM E GL P + +L L
Sbjct: 591 SEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 133/327 (40%), Gaps = 29/327 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAER----------FLGEMIERGVEPNVVTYNVLLNGVCR 51
P+++ Y +LI+ + + D + F ++ G+ V L++ C
Sbjct: 85 PDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACN 144
Query: 52 RASLHP---NERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
+ + E+F K A + F+ M +G D S + L R
Sbjct: 145 ESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGG 204
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
+ L M + TV + T V+ LC G +E +L+ E+ GV + TYN
Sbjct: 205 QVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYN 264
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
F + Y R D G ++ M+++ + N+ TY +LI F + +++ + ++ ++
Sbjct: 265 AFIEGYFKRLDLGGVAEILTLMEKEGVAC-NVVTYTLLIHGFSNIGKIEEAQRLFEEMRE 323
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
+ D+ YT +I C K A F EM +KGL+P T+ L G+ ++ +
Sbjct: 324 KGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEA 383
Query: 279 WRRL-----KKKLDEESITFGSEFQNY 300
+ L K +D + F + Y
Sbjct: 384 AQMLVNEMQGKGIDLNPVIFNTLIDGY 410
>gi|297720523|ref|NP_001172623.1| Os01g0816000 [Oryza sativa Japonica Group]
gi|56785065|dbj|BAD82704.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125572420|gb|EAZ13935.1| hypothetical protein OsJ_03862 [Oryza sativa Japonica Group]
gi|255673815|dbj|BAH91353.1| Os01g0816000 [Oryza sativa Japonica Group]
Length = 530
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 147/293 (50%), Gaps = 26/293 (8%)
Query: 4 VKMYTSLIYGWCKINR-IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
K + ++ GWC + R + A+RF M +G++ +VV+Y +++ + SL
Sbjct: 250 TKSFNVVLNGWCNMVRSVREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLD------ 303
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K+F+ M+ G+ PD ++ V++ ++ + + M+EKG+ P AT+
Sbjct: 304 ----TVMKLFNRMKEAGVIPDRKIYNAVVYALAKGQCVNEAKALVRSMEEKGVAPDTATF 359
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S+++ LC ++++A ++L +M+ G+SPS T++ R + L +MKE
Sbjct: 360 NSLIRPLCKARQVQEARKMLDDMLGRGLSPSVRTFHALLDVARSPIEV---FDLLDKMKE 416
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P + T+ +LI F + D V ++W+ + + L D +Y +LIHGL + +
Sbjct: 417 LQ-CDPEMDTFIMLIRKFCRWRQHDSVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLE 475
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
E+ +Y+ EM KG P+K T E M++ W ++L + S + GS
Sbjct: 476 ESAKYYEEMKAKGFPPEKKTEE----------MIQAWLS-GRELAKASASVGS 517
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 13/157 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ K+Y +++Y K ++ A+ + M E+GV P+ T+N L+ +C+
Sbjct: 318 IPDRKIYNAVVYALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCK--------- 368
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ ++ A K+ D+M RG+ P V +F +L V A P D L+ MKE P +
Sbjct: 369 -ARQVQEARKMLDDMLGRGLSPSVRTFHALLDV---ARSPIEVFDLLDKMKELQCDPEMD 424
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
T+ +++ C + + E+L M NG+SP Y
Sbjct: 425 TFIMLIRKFCRWRQHDSVEKLWSAMPANGLSPDRSAY 461
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 103/237 (43%), Gaps = 20/237 (8%)
Query: 53 ASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
A L + RF+ +A + D+MR R + +++ Y A ++ +
Sbjct: 155 AILAKHRRFD----DARALLDQMR-RSSLASPAAVMLLIRRYCAARDVAGAVAAFRALPN 209
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY----RGRK 168
G P VA + ++ LC ++DAE LL + +++N + R +
Sbjct: 210 LGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKE-FPFETKSFNVVLNGWCNMVRSVR 268
Query: 169 DAN---GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL 225
+A AM++ + +K D + +Y +I F +D V +++N +K + + D
Sbjct: 269 EAKRFWNAMEI-KGIKRD------VVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVIPDR 321
Query: 226 DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
Y +++ L + Q EA M EKG+ P TF +L R L ++ ++ R++
Sbjct: 322 KIYNAVVYALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKM 378
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 141/294 (47%), Gaps = 17/294 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ Y ++ CK ++D A+ + EM G+ P+VVTY+ L++G+C+ L
Sbjct: 337 PNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLD----- 391
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +EM G+ PD + + +L+ S+A K +L L MK +G P + T
Sbjct: 392 -----RACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GRI++A L +MV +P +Y A GA ++++M
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMV 506
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + +P+ Y+ L+ D+ E+ +K S D + M++ GLC+ K
Sbjct: 507 KRGV-LPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVVDGLCKAGKA 562
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
++AC+ M + G T+ + RGL + + R+L +D+ S T S
Sbjct: 563 EDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQL---VDDASETHTS 613
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 29/292 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + SL+ G C R+ A M + G EPNV++Y+ LL+G+C+ L
Sbjct: 141 VPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLD---- 196
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++++EM + PD+ +++ + +A++ + D M KG
Sbjct: 197 ------EACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAV 250
Query: 121 TYTSVVKCLCSCGRIEDAE-ELLGEMVRNGV----------------SPSAETYNCFFKE 163
+++V+ LC G E+A+ +++ + R+G+ PSAE +N
Sbjct: 251 AFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHA 310
Query: 164 YRGRKDANGAMKLYRQMK--EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
K + L+++MK ++ C PN+ TYNI++ ++D +E+ N + L
Sbjct: 311 VCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGL 370
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
D+ +Y+ L+ GLC+ K AC EM ++G+ P T ++ L ++
Sbjct: 371 SPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 139/320 (43%), Gaps = 46/320 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--ASLHPN 58
+P++ YTS + G CK NR+ A +M+ +G + + V ++ ++ +C++ A N
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQN 270
Query: 59 ERFEKTIRN-----AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK-------------- 99
+ E R+ A K F+EM R P F+ ++H ++ +
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330
Query: 100 ------PQL--------------SLDK----LNFMKEKGICPTVATYTSVVKCLCSCGRI 135
P L LD+ +N M G+ P V TY+++V LC G++
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
+ A +LL EM + GV P + T + A+ MK P++ TYN
Sbjct: 391 DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARG-STPDLVTYNT 449
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
L+ R+D + ++ D+ SYT++I LC + A F EM+++G
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509
Query: 256 LLPQKVTFETLYRGLIQSDM 275
+LP V + +L GL ++ +
Sbjct: 510 VLPDTVLYHSLLDGLARNGL 529
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 113/211 (53%), Gaps = 1/211 (0%)
Query: 65 IRNAEKVFDEM-RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
I ++FD + R +G + V +++ L ++A+ QL+ +K M+ +G P TY+
Sbjct: 18 ISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYS 77
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
V++ LC G ++ A+ELLG++ +GV + TY+ + A+++++ M
Sbjct: 78 IVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAG 137
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
CVP++ T+N L+ + RM ++ ++ + ++ SY+ L+ GLC+ + E
Sbjct: 138 GGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDE 197
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
AC+ + EM+EK +P V + + GL +++
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKAN 228
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
++G + +V TYN L+ + + + +EK F +M+ RG PD ++SIVL
Sbjct: 31 QKGYQHSVFTYNCFLDALAKANA--GQLAYEK--------FQQMQRRGYPPDDFTYSIVL 80
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM-VRNGV 150
+A + + + L ++E G+ V TY+ V+ C R++DA E+ M G
Sbjct: 81 RGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGC 140
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
P T+N K + + A L+ M + C PN+ +Y+ L+ R+D
Sbjct: 141 VPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAG-CEPNVISYSTLLDGLCKAGRLDEAC 199
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+W + DL +YT + GLC+ + EAC +M+ KG V F T+
Sbjct: 200 RLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 143/343 (41%), Gaps = 46/343 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y+ ++ G CK +D A+ LG++ E GV+ NV+TY+V+++G C+ + +
Sbjct: 71 PDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEI 130
Query: 62 EKTI------------------------RNAEK--VFDEMRVRGIEPDVTSFSIVLHVYS 95
KT+ R +E +F+ M G EP+V S+S +L
Sbjct: 131 FKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLC 190
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A + + M EK P + YTS V LC R+ +A + +MV G A
Sbjct: 191 KAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAV 250
Query: 156 TYNCFFKEYRGRKDANGAMK-----LYRQMKEDDLC-----------VPNIHTYNILIGM 199
++ + A A L R D+ C P+ +N LI
Sbjct: 251 AFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHA 310
Query: 200 FMALNRMDMVREIWNHVKGSE---LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
R+ ++ +K + +L++Y +++ LC+ ++ EA + EM GL
Sbjct: 311 VCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGL 370
Query: 257 LPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
P VT+ L GL + L L +++ +E + F F +
Sbjct: 371 SPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGV-FPDSFTD 412
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 37/305 (12%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y + K N +A +M RG P+ TY+++L G+C+ L
Sbjct: 37 SVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD------ 90
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVAT 121
A+++ ++R G++ +V ++S+V+ +A + +L+ M G C P V T
Sbjct: 91 ----KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVT 146
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++K LCS R+ +A L M + G P+ +Y+ + A +L+ +M
Sbjct: 147 FNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV 206
Query: 182 EDDLCVPNIHTYNILIGMFMALNRM----DMVREIWNHVKGSEL---------------G 222
E CVP++ Y + NR+ D R++ KGS+ G
Sbjct: 207 EKS-CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT--KGSKADAVAFSTVIGILCKKG 263
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRT 278
++ +I LC EAC+ F EMI + P F TL + +S D +
Sbjct: 264 HAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323
Query: 279 WRRLK 283
++R+K
Sbjct: 324 FQRMK 328
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 133/289 (46%), Gaps = 21/289 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y L+ C+ +R+ A + L EM +G P+ VTY +++ +C +
Sbjct: 167 PNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEV 226
Query: 62 --------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
E ++ V +M RG++P+V +++ +++ + +A + +
Sbjct: 227 LSAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELR 286
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
++ L M G P VAT+T++V L + GR+ DA ++ MV G +PS +YN
Sbjct: 287 MACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLI 346
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
+ D GA + M++ C PN TY+ LI F +D IWN + S
Sbjct: 347 RGLCSVGDLKGASSVLNDMEQHG-CFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGC 405
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ YT ++ C+K + +A +M+ + P VTF TL R L
Sbjct: 406 KPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSL 454
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 19/269 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+L+ G R+ A M+ G P+ V+YNVL+ G+C L
Sbjct: 302 PNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDL------ 355
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A V ++M G P+ ++S ++ +S+A ++ N M G P V
Sbjct: 356 ----KGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVV 411
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++V C AE L+ +M+ P+ T+N + + A+ ++ +M+
Sbjct: 412 YTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMR 471
Query: 182 EDDLCVPNIHTYN-ILIGMFMALN---RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
C PN TYN +L G+F N + MV E+ NH G E L L +Y ++ GLC+
Sbjct: 472 RHG-CPPNGRTYNELLHGLFREGNCGDALQMVIEMQNH--GIE--LSLVTYNTVVSGLCQ 526
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ +EA + MI +G+ P TF +
Sbjct: 527 MRMGREAMFFVGRMIVRGIQPDAFTFTAI 555
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 16/272 (5%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
++Y LI + N + G M + GV+PNV TYN+L+ +C+ N R
Sbjct: 135 RLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQ------NHR---- 184
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ A K+ DEM +G PD ++ ++ + + + L+ P A+Y +
Sbjct: 185 VGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAP-----PVAASYNA 239
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
V+ LC R+++ ++G+MV G+ P+ TY + + A + +M
Sbjct: 240 VILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITG 299
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
C PN+ T+ L+G R+ ++W + SY +LI GLC K A
Sbjct: 300 -CTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGA 358
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+M + G P T+ TL G ++ L
Sbjct: 359 SSVLNDMEQHGCFPNARTYSTLIDGFSKAGDL 390
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + Y++LI G+ K +D A +M G +PNVV Y ++ C++ +
Sbjct: 372 PNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFN----- 426
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE + D+M V P+ +F+ ++ + +L + M+ G P T
Sbjct: 427 -----QAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRT 481
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ L G DA +++ EM +G+ S TYN + AM +M
Sbjct: 482 YNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMI 541
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ T+ +I + + M I + G ++ YT+L+ LC + K
Sbjct: 542 VRGI-QPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKL 600
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++A Y ++M+ +G+ P VT+ L RG+ ++
Sbjct: 601 EDAMVYLLKMLYEGIYPNTVTWNVLVRGVFRN 632
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 9/209 (4%)
Query: 72 FDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC--PTVA-TYTSVVKC 128
EMR+RG+ + + ++RA P +L C PT Y ++
Sbjct: 84 LQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTAPRLYNHLIDA 143
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
L + + G M ++GV P+ TYN + A K+ +M C P
Sbjct: 144 LLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKG-CPP 202
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
+ TY ++ L R+D E+ + SY +I LC + + +E
Sbjct: 203 DDVTYGTIVSALCTLGRVDEATEVLSAAPPVAA-----SYNAVILALCREFRMQEVFAVV 257
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+M+ +GL P +T+ T+ ++ LR
Sbjct: 258 GDMVGRGLQPNVITYTTIVNAFCKAGELR 286
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 138/298 (46%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y++LI G C RI A L EM E+G+EP V TY V ++ +C
Sbjct: 265 PNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGR------- 317
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A + M +G P V +++ ++ RA K +L++ + M ++G+ P T
Sbjct: 318 ---VDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVT 374
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC+ GR A ++ M +G +A+TYN K G D AM ++ +M
Sbjct: 375 YNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKML 434
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+D P + TYN LI + ++ +K S D +Y LI G C+ K
Sbjct: 435 KDGPS-PTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKL 493
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
A +F EM++ G+ P + T+ + G + + L ++++E + E N
Sbjct: 494 DSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYN 551
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 128/265 (48%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + ++I CK ++ A ++ + + P+ TY L+ G CR N +
Sbjct: 195 PSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCR------NRKL 248
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K A +VFD M G P+ ++S +++ + ++D L M EKGI PTV T
Sbjct: 249 DK----AFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYT 304
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT + LC GR++DA L+ M + G SPS +TY A+ +Y +M
Sbjct: 305 YTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKML 364
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ L VPN TYN LI R + +I++ ++G + +Y +I GL
Sbjct: 365 KEGL-VPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDI 423
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
++A F +M++ G P VT+ TL
Sbjct: 424 EKAMVVFNKMLKDGPSPTVVTYNTL 448
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 140/315 (44%), Gaps = 26/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+V+ YT++I G + ++++A +M++ G+ PN VTYN L+N +C
Sbjct: 335 PSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKI 394
Query: 52 ------RASLHPNERFEKTIRN---------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+L + + + I+ A VF++M G P V +++ ++ +
Sbjct: 395 FDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLK 454
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ L MKE P TY ++ C G+++ A EM++ G+SP+ T
Sbjct: 455 RGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWT 514
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y Y + A+ L+ +M+E+ C +I TYN +I NR + +
Sbjct: 515 YTAMIDGYCKEGKIDVALSLFERMEENG-CSASIETYNAIISGLSKGNRFSEAEKFCAKM 573
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
L + +YT LI+GLC+ A + F EM +K LP T+ +L GL Q +
Sbjct: 574 TEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKV 633
Query: 277 RTWRRLKKKLDEESI 291
RL + E +I
Sbjct: 634 DAAERLTENGCEPTI 648
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 119/258 (46%), Gaps = 15/258 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y +LI K ++ A RFL M E EP+ TY L++G C+ L
Sbjct: 440 PTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLD----- 494
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A F EM GI P+ +++ ++ Y + K ++L M+E G ++ T
Sbjct: 495 -----SATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIET 549
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ L R +AE+ +M G+ P+ TY N A K++ +M+
Sbjct: 550 YNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEME 609
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + C+PN HTY LI ++D + + G E +D+Y+ L+ GLC + +
Sbjct: 610 KKN-CLPNAHTYTSLIYGLCQEGKVDAAERLTEN--GCE--PTIDTYSTLVSGLCREGRS 664
Query: 242 KEACQYFVEMIEKGLLPQ 259
EA Q M EKGL P
Sbjct: 665 NEASQLVENMKEKGLSPS 682
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 132/269 (49%), Gaps = 17/269 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+++ Y ++I G K NR AE+F +M E+G++PN +TY L+NG+C+ + +
Sbjct: 546 SIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNL----- 600
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A K+F EM + P+ +++ +++ + K +D + E G PT+ TY
Sbjct: 601 -----AFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK----VDAAERLTENGCEPTIDTY 651
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++V LC GR +A +L+ M G+SPS E Y + + A++++ M
Sbjct: 652 STLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAV 711
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P++ Y +LI ++R + I+ + + DL +T+L+ GL ++
Sbjct: 712 KGF-QPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGD-S 769
Query: 243 EACQYFVEMIE-KGLLPQKVTFETLYRGL 270
+ C F+ ++E + P T+ L R L
Sbjct: 770 DLCMKFLYLMESRNCTPSLHTYIILAREL 798
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 132/296 (44%), Gaps = 30/296 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA----SLHP 57
P+ + Y LI G+CK ++D A F EM++ G+ PN TY +++G C+ +L
Sbjct: 475 PDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSL 534
Query: 58 NERFEKT---------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
ER E+ AEK +M +G++P+ +++ +++ +
Sbjct: 535 FERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCK 594
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
L+ + M++K P TYTS++ LC G+++ AE L NG P+ +T
Sbjct: 595 NTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL----TENGCEPTIDT 650
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ +N A +L MKE L P++ Y L+ ++D EI+N +
Sbjct: 651 YSTLVSGLCREGRSNEASQLVENMKEKGLS-PSMEIYCSLLVAHCKSLKVDCALEIFNLM 709
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
L Y +LI LC + +EA F +++K + + L GL+Q
Sbjct: 710 AVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQ 765
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 102/206 (49%), Gaps = 1/206 (0%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ +A+ V+ ++ G++P + +F+ ++++ + K Q ++ N + + +CP TYTS
Sbjct: 178 VTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTS 237
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ C +++ A E+ MV++G +P++ TY+ AM + +M E
Sbjct: 238 LILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKG 297
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
+ P ++TY + I + R+D + + + +YT +I GL K + A
Sbjct: 298 I-EPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELA 356
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGL 270
+ +M+++GL+P VT+ L L
Sbjct: 357 IGMYHKMLKEGLVPNTVTYNALINEL 382
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 5/172 (2%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T+ ++ +++ L + A+ + ++ +GV PS T+N + A+ ++
Sbjct: 161 TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVF 220
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
++ + DLC P+ TY LI ++D E+++ + + +Y+ LI+GLC
Sbjct: 221 NKIFQFDLC-PDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCN 279
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK 285
+ + EA EM EKG+ P T+ L D + R + KK
Sbjct: 280 EGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKK 331
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 80/184 (43%), Gaps = 10/184 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y++L+ G C+ R + A + + M E+G+ P++ Y LL C+
Sbjct: 646 PTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLK------- 698
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++F+ M V+G +P + + +++ + + +L+ + +K +
Sbjct: 699 ---VDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIV 755
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T +V L G + + L M +PS TY +E + G ++ +++
Sbjct: 756 WTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLR 815
Query: 182 EDDL 185
E L
Sbjct: 816 EVSL 819
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%)
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
P++ T+N +I + ++ ++N + +L D +YT LI G C +K +A +
Sbjct: 195 PSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEV 254
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
F M++ G P VT+ TL GL + + +++ E+ I
Sbjct: 255 FDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGI 298
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++++Y SL+ CK ++D A M +G +P++ Y VL+ +C + R
Sbjct: 681 PSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVS------RA 734
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + +F + + D+ +++++ + L + L M+ + P++ T
Sbjct: 735 EEALN----IFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHT 790
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Y + + L G+ ++ +G +R PS
Sbjct: 791 YIILARELSKVGKSIGTDQ-IGNRLREVSLPS 821
>gi|125528152|gb|EAY76266.1| hypothetical protein OsI_04202 [Oryza sativa Indica Group]
Length = 528
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 147/293 (50%), Gaps = 26/293 (8%)
Query: 4 VKMYTSLIYGWCKINR-IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
K + ++ GWC + R + A+RF M +G++ +VV+Y +++ + SL
Sbjct: 248 TKSFNVVLNGWCNMVRSVREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLD------ 301
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K+F+ M+ G+ PD ++ V++ ++ + + M+EKG+ P AT+
Sbjct: 302 ----TVMKLFNRMKEAGVVPDRKIYNAVVYALAKGRCVNEAKALVRSMEEKGVAPDTATF 357
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S+++ LC ++++A ++L +M+ G+SPS T++ R + L +MKE
Sbjct: 358 NSLIRPLCKARQVQEARKMLDDMLGRGLSPSVRTFHALLDVARSPIE---VFDLLDKMKE 414
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P + T+ +LI F + D V ++W+ + + L D +Y +LIHGL + +
Sbjct: 415 LQ-CDPEMDTFIMLIRKFCRWRQHDSVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLE 473
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
E+ +Y+ EM KG P+K T E M++ W ++L + S + GS
Sbjct: 474 ESAKYYEEMKAKGFPPEKKTEE----------MIQAWLS-GRELAKASASVGS 515
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 13/157 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ K+Y +++Y K ++ A+ + M E+GV P+ T+N L+ +C+
Sbjct: 316 VPDRKIYNAVVYALAKGRCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCK--------- 366
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ ++ A K+ D+M RG+ P V +F +L V A P D L+ MKE P +
Sbjct: 367 -ARQVQEARKMLDDMLGRGLSPSVRTFHALLDV---ARSPIEVFDLLDKMKELQCDPEMD 422
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
T+ +++ C + + E+L M NG+SP Y
Sbjct: 423 TFIMLIRKFCRWRQHDSVEKLWSAMPANGLSPDRSAY 459
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 109/256 (42%), Gaps = 26/256 (10%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G P Y+ +L A L + RF+ +A + D+MR R + +++
Sbjct: 140 GYAPGRHAYHSML------AILAKHRRFD----DARALLDQMR-RSSLASPAAVMLLIRR 188
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Y A ++ + G P VA + ++ LC ++DAE LL +
Sbjct: 189 YCAARDVAGAVAAFRALPSLGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKE-FPFE 247
Query: 154 AETYNCFFKEY----RGRKDAN---GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+++N + R ++A AM++ + +K D + +Y +I F +
Sbjct: 248 TKSFNVVLNGWCNMVRSVREAKRFWNAMEI-KGIKRD------VVSYGSMISCFSKAGSL 300
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D V +++N +K + + D Y +++ L + + EA M EKG+ P TF +L
Sbjct: 301 DTVMKLFNRMKEAGVVPDRKIYNAVVYALAKGRCVNEAKALVRSMEEKGVAPDTATFNSL 360
Query: 267 YRGLIQSDMLRTWRRL 282
R L ++ ++ R++
Sbjct: 361 IRPLCKARQVQEARKM 376
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SLI G K R+D A FL EM+E G++PN TY ++G +
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA----- 539
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A+K EMR G+ P+ + +++ Y + K + M ++GI T
Sbjct: 540 -----SADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKT 594
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ L +++DAEE+ EM G++P +Y + + A ++ +M
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ L PN+ YN+L+G F ++ +E+ + + L + +Y +I G C+
Sbjct: 655 EEGL-TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA + F EM KGL+P + TL G
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 140/325 (43%), Gaps = 47/325 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + Y SLI G+C+ + L EM +R + + TY ++ G+C L
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD---- 434
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + EM G P+V ++ ++ + + + ++ L MKE+GI P +
Sbjct: 435 ------GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y S++ L R+++A L EMV NG+ P+A TY F Y + A K ++M
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 181 KE----------------------------------DDLCVPNIHTYNILIGMFMALNRM 206
+E D + + TY +L+ +++
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D EI+ ++G + D+ SY +LI+G + ++A F EM+E+GL P + + L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESI 291
G +S + + L LDE S+
Sbjct: 669 LGGFCRSGEIEKAKEL---LDEMSV 690
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 138/306 (45%), Gaps = 47/306 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN + T LI +CK ++ A M+++G+ + TY VL+NG L N++
Sbjct: 554 LPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNG------LFKNDK 607
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +AE++F EMR +GI PDV S+ ++++ +S+ Q + + M E+G+ P V
Sbjct: 608 ----VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ C G IE A+ELL EM G+ P+A TY Y D A +L+ +M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 181 KEDDL---------------------------------CVPNIHTYNILIGMFMALNRMD 207
K L C + +N LI + +
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 208 MVREIWNHV-KGS--ELGLDLD-SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
+ E+ N + GS G D +Y ++I LC++ + A + F +M L+P +T+
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 264 ETLYRG 269
+L G
Sbjct: 844 TSLLNG 849
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 14/277 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI G+ K+ + A EM+E G+ PNV+ YN+LL G CR
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE------- 677
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A+++ DEM V+G+ P+ ++ ++ Y ++ + + MK KG+ P
Sbjct: 678 ---IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK-EYRGRKDANGAMKLYRQM 180
YT++V C +E A + G + G + S +N ++ K L R M
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 181 KE--DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
D PN TYNI+I ++ +E+++ ++ + L + +YT L++G +
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ E F E I G+ P + + + ++ M
Sbjct: 854 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 130/291 (44%), Gaps = 30/291 (10%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF----- 61
Y LI G CKI R++ A+ L EM GV + TY++L++G+ + + +
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 62 --------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
E + A+ +FD M G+ P +++ ++ Y R +
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
+ L MK++ I + TY +VVK +CS G ++ A ++ EM+ +G P+ Y
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
K + AM++ ++MKE + P+I YN LI RMD R + + L
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGI-APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ +Y I G E ++ A +Y EM E G+LP KV L GLI
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV----LCTGLIN 565
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +YT+LI + + +R A R L EM E+G+ P++ YN L+ G+ +
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK---------- 499
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A EM G++P+ ++ + Y A + + + M+E G+ P
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T ++ C ++ +A MV G+ A+TY + A +++R+M+
Sbjct: 560 CTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P++ +Y +LI F L M I++ + L ++ Y ML+ G C +
Sbjct: 620 GKGI-APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++A + EM KGL P VT+ T+ G +S L RL
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 120/294 (40%), Gaps = 26/294 (8%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----------------PNERFEK 63
+D A + MI +G+ P TY+VL++G+C+ L N +
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 64 TI------RNAEK---VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG 114
I RNA+ + EM GI + + V S+ + + + M G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
+ P Y S+++ C + ELL EM + + S TY K D +GA
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
+ ++M C PN+ Y LI F+ +R + +K + D+ Y LI G
Sbjct: 438 NIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
L + ++ EA + VEM+E GL P T+ G I++ + + K++ E
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 116/277 (41%), Gaps = 33/277 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + L+ + NR+D+ M+ER V +V TY++L+ CR ++
Sbjct: 183 VPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLG-- 240
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE----KGIC 116
+ + EK F L++D +KE KG+
Sbjct: 241 -KDVLFKTEKEF-------------------------RTATLNVDGALKLKESMICKGLV 274
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P TY ++ LC R+EDA+ LL EM GVS TY+ ++A+ A L
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+M + + + Y+ I + M+ + +++ + S L +Y LI G C
Sbjct: 335 VHEMVSHGINIKP-YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ ++ + VEM ++ ++ T+ T+ +G+ S
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 101/247 (40%), Gaps = 32/247 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PN Y ++I G+CK + A R EM +G+ P+ Y L++G CR
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 52 --------RASLHPNE-------RFEKTIRNAE---KVFDEMRVRGIEPDVTSFSIVLHV 93
+S P +F KT E ++ D R +P+ +++I++
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ + + + + M+ + PTV TYTS++ GR + + E + G+ P
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Query: 154 AETY----NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
Y N F KE K +++ + DD C +I T L+ F + M++
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Query: 210 REIWNHV 216
++ ++
Sbjct: 935 EKVMENM 941
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERF--LGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
MP V YTSL+ G+ K+ R AE F E I G+EP+ + Y+V++N +
Sbjct: 837 MPTVITYTSLLNGYDKMGR--RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK------- 887
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI-----VLHVYSRAHKPQLSLDKLNFMKEK 113
E A + D+M + D SI +L +++ + +++ + M
Sbjct: 888 ---EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRL 944
Query: 114 GICPTVATYTSVV--KCLCSCGRIE 136
P AT ++ C+ S R+E
Sbjct: 945 QYIPDSATVIELINESCISSNQRVE 969
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 138/302 (45%), Gaps = 27/302 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIER--GVEPNVVTYNVLLNGVCRRASLHPNE 59
P++ Y +L+ +CK R+D A L +M R G PN VTYNV++NG+ R+ L
Sbjct: 227 PSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAA 286
Query: 60 RFEKTIRNAEK------------------------VFDEMRVRGIEPDVTSFSIVLHVYS 95
+ +R ++K + EM GI P V +++ ++
Sbjct: 287 QLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLF 346
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + K + M+ KG+ P + TY S++ C G ++ A L G++ R G+ P+
Sbjct: 347 KTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVL 406
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN Y D GA +L +M E+D C+P++ TY IL+ + + MVR ++
Sbjct: 407 TYNILIDGYCRLGDLEGARRLKEEMTEED-CLPDVCTYTILMNGSCMVRNLAMVRIFFDE 465
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ L D +Y I A Q EM+ +G+ VT+ L GL ++
Sbjct: 466 MLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGS 525
Query: 276 LR 277
L+
Sbjct: 526 LK 527
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 133/275 (48%), Gaps = 11/275 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT L+ G C + + M F EM+ +G+EP+ YN ++ E
Sbjct: 437 LPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISA----------EL 486
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I NA ++ +EM +RGI D ++++++ + + + M G+
Sbjct: 487 TIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCV 546
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ C GR+ +A+ + MV +G+SPS TY F Y R + A +R+M
Sbjct: 547 TYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKM 606
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E+ + PN TYN+L+ + R + + ++ + L + +YT+LI G C++
Sbjct: 607 LEEGV-EPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGN 665
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
W A + + EM +KG+ P T L++G + M
Sbjct: 666 WVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGHM 700
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 11/263 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V Y +LI G K + A+ EM +G+ P+++TYN L+NG C+ +L
Sbjct: 332 VPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNL----- 386
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A +F +++ G+ P V +++I++ Y R + + M E+ P V
Sbjct: 387 -----KQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVC 441
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ C + EM+ G+ P YN A +L +M
Sbjct: 442 TYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEM 501
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + TYN+LI + +W + L LD +YT LIH CE+ +
Sbjct: 502 MLRGISSDTV-TYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGR 560
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
EA F M+ GL P VT+
Sbjct: 561 LIEAKNIFDGMVASGLSPSVVTY 583
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 28/244 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+ Y + I I I A + EM+ RG+ + VTYNVL++G+C+ SL
Sbjct: 473 PDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVL 532
Query: 56 --------------------HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
H + + I A+ +FD M G+ P V +++I +H Y
Sbjct: 533 WMKMVTDGLRLDCVTYTCLIHAHCERGRLIE-AKNIFDGMVASGLSPSVVTYTIFIHTYC 591
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
R L+ M E+G+ P TY ++ LC GR E A + EM+ G+ P+
Sbjct: 592 RRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKY 651
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY + A++LY +M + + P+ T+N L F + D V+ + N
Sbjct: 652 TYTLLIDGSCKEGNWVHAIRLYCEMHQKGI-HPDHCTHNALFKGFGEGHMYDAVQYLENV 710
Query: 216 VKGS 219
V G+
Sbjct: 711 VLGT 714
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 14/263 (5%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
EM GV P V N +L V R A+ + R V+ +M G+EP + +++
Sbjct: 184 EMARHGVAPFVKECNCVLR-VLRDAARWDDMR---------AVYSDMLQLGVEPSIFTYN 233
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEK--GICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
+L + +A + ++ L M+ + G P TY V+ L G +E A +L+ +++
Sbjct: 234 TLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLV-DIM 292
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
R SA TYN R A L +M+ + + VP + TYN LI
Sbjct: 293 RLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGI-VPTVVTYNTLIDGLFKTGNA 351
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + ++ ++ L DL +Y LI+G C+ K+A F ++ GL P +T+ L
Sbjct: 352 EAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNIL 411
Query: 267 YRGLIQSDMLRTWRRLKKKLDEE 289
G + L RRLK+++ EE
Sbjct: 412 IDGYCRLGDLEGARRLKEEMTEE 434
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 142/294 (48%), Gaps = 24/294 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +L GWC++ A L M+E G+ P TYN++L G R L
Sbjct: 197 PDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQL------ 250
Query: 62 EKTIRNAEKVFDEMRVRG-----IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
R+A F +M+ RG +PDV S++ ++H A + + + + M ++G
Sbjct: 251 ----RHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCA 306
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P+VATY ++++ +C G +EDA + M G P+ TY + + +KL
Sbjct: 307 PSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKL 366
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV-KGSELGLDLDSYTMLIHGL 235
+MK C P + TYN+LI M+ +++ + KG E + D+Y ++I +
Sbjct: 367 LERMKNGG-CEPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAM 425
Query: 236 CEKQKWKE---ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+++ ++ A + EM+++G LP++ F + GL ML + L +KL
Sbjct: 426 FMRKRAEDMVLAARMVEEMVDRGYLPRRFMFNRVLNGL----MLTGNQELSRKL 475
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 29/269 (10%)
Query: 34 GVEPNVVTYNVLLNGVCRRA--------SLHPNERFEKTIRNAEKVFDEMRVRGIEPDVT 85
V P+ + + L+ RR L P R T R +F+ + V PD+
Sbjct: 89 AVGPSTLDLALDLSARLRRPRQLTNSILGLFPRHRLAFTPRTFPILFERLAVSQRRPDLA 148
Query: 86 -SFSIVLHVYSRAHK--PQLS--LDKLNFMKEKG------------ICPTVATYTSVVKC 128
+ LH R + P + LD L+ + G P V TY ++
Sbjct: 149 VRLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQRFTPDVVTYNTLADG 208
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE----DD 184
C A ++L MV +G++P+ TYN K + A + QMK+ D+
Sbjct: 209 WCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDE 268
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
C P++ +Y ++ +++ R++++ + + +Y LI +C+K ++A
Sbjct: 269 SCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDA 328
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
F M KG +P VT+ L RGL +
Sbjct: 329 VTVFDGMRVKGYVPNVVTYTVLIRGLCHA 357
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 115/278 (41%), Gaps = 58/278 (20%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
++ ++ SL+ K A + +E+ P+VVTYN L +G CR
Sbjct: 164 DLPLFNSLLDALSKSRHAGKAASLV-RALEQRFTPDVVTYNTLADGWCR----------- 211
Query: 63 KTIRNAEKVFDEMRV---RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI---- 115
+++ + D +R+ GI P T+++I+L + RA + + + D MK++G
Sbjct: 212 --VKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDES 269
Query: 116 C-PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
C P V +YT++V L G++E A ++ EM + G
Sbjct: 270 CKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEG------------------------- 304
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
C P++ TYN LI + ++ +++ ++ ++ +YT+LI G
Sbjct: 305 -----------CAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPNVVTYTVLIRG 353
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
LC K + M G P T+ L R L +
Sbjct: 354 LCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFE 391
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 14/146 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-E 59
+PNV YT LI G C +ID + L M G EP V TYNVL+ + + +
Sbjct: 341 VPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLD 400
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY---SRAHKPQLSLDKLNFMKEKGIC 116
FEK + E + P+ +++I++ RA L+ + M ++G
Sbjct: 401 LFEKMSKGEECL----------PNQDTYNIIISAMFMRKRAEDMVLAARMVEEMVDRGYL 450
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELL 142
P + V+ L G E + +LL
Sbjct: 451 PRRFMFNRVLNGLMLTGNQELSRKLL 476
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 151/333 (45%), Gaps = 51/333 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+++ G K D + +M+ EP ++TY VL++G+C+ H ER
Sbjct: 104 PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKA---HKVER- 159
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A VF+EM +G +PD+ ++S ++ S+A + + ++ M +G PT
Sbjct: 160 ------ACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVA 213
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS+V LC CGRI++A + + EM R + P +TY+ Y G A + +M
Sbjct: 214 YTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMA 273
Query: 182 EDDL----------------------------------CVPNIHTYNILIGMFMALNRMD 207
+ D C P++HTY I+I F M
Sbjct: 274 DRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMA 333
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ + + + + YTM++ G + + +EA + + +++ G+LP VT+ T+
Sbjct: 334 AATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVI 393
Query: 268 RGLIQ-------SDMLRTWRRLKKKLDEESITF 293
L + ++LR +R K++L+ +T+
Sbjct: 394 NALCKLKKMDEALELLREMQRRKEELEPSIVTY 426
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 137/284 (48%), Gaps = 11/284 (3%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
V Y+ ++ G+ + +++ A + EM +R P+ ++Y + + +L+ R E+
Sbjct: 246 VDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIE------ALYSIGRREE 299
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
AEKVF+ M +G +PD+ ++ I++ + + + L M + + P YT
Sbjct: 300 ----AEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYT 355
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM-KE 182
++ R+E+A EL ++++G+ PS TYN K + A++L R+M +
Sbjct: 356 MIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRR 415
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ P+I TY+++I + + ++ + + + D +YT LI L K
Sbjct: 416 KEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVS 475
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A + EM++ G+ P T+ TL + L +SD+ W L++ +
Sbjct: 476 RAMELLEEMLKAGIFPDDHTYGTLVQILCRSDVDAAWDLLQEMM 519
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 88/167 (52%), Gaps = 19/167 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERG--VEPNVVTYNVLLNGVCRRASLHPN 58
+P+ Y ++I CK+ ++D A L EM R +EP++VTY+++++G+ +
Sbjct: 383 LPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGK------- 435
Query: 59 ERFEKTIRNAEKVFD---EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI 115
+ E+ FD EM G+ PD +++ ++ + A K +++ L M + GI
Sbjct: 436 ------VGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGI 489
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
P TY ++V+ LC ++ A +LL EM+RNG +P+ T+ K
Sbjct: 490 FPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKAVEK 535
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
EP+V+SF+I+L ++ ++ L MK +GI AT+ ++ LC+
Sbjct: 26 EPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCA--------- 76
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GM 199
R + + +N +E A +L+ ++ P+ TY ++ G+
Sbjct: 77 ------RRDLDKAVSYFNSRTEE---------ACRLFEAIE-----APDSVTYTAIVDGL 116
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
F A N D E + + S+ L +YT+L+ GLC+ K + AC F EMI KG P
Sbjct: 117 FKAGN-YDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPD 175
Query: 260 KVTFETLYRGLIQSDMLRTWRRL 282
+ + +L GL ++ + R+L
Sbjct: 176 IIAYSSLIDGLSKAGRVDEARKL 198
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 18/223 (8%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
EPNV ++N+LL G R + FE + NA + EM+ RGI + + ++L
Sbjct: 26 EPNVSSFNILLRGFAAR------DDFE--VVNA--LLREMKARGITSNGATHGVILSALC 75
Query: 96 RAHKPQLSLDKLNFMKEKGI-------CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
++ N E+ P TYT++V L G + E +MV +
Sbjct: 76 ARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVAS 135
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
P+ TY A ++ +M P+I Y+ LI R+D
Sbjct: 136 KCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGH-KPDIIAYSSLIDGLSKAGRVDE 194
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251
R++ + + +YT ++ GLC+ + +EA + EM
Sbjct: 195 ARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEM 237
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 140/291 (48%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +T+L+ G C ++D +M+ RG++PNV TYNV++N + + + F
Sbjct: 130 PSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGF 189
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ EKV G P+V ++S ++ Y + + + M KG P V T
Sbjct: 190 ---LKQMEKV-------GCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ C RIE+A +LL E +R G+ P T+ A +L+R +
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYIC 299
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
PNI TY +L+ ++ ++ ++ S + +L YT+LI LC+ K
Sbjct: 300 AHGH-TPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKI 358
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
K+ + F +I++GL P T+ L L + ++ +L +K++E+ T
Sbjct: 359 KDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCT 409
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 138/285 (48%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +I K + + A FL +M + G PNVV Y+ L++G C R +
Sbjct: 165 PNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMD----- 219
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A VFD M +G P+V +++ +++ Y + + + ++ L+ KG+ P + T
Sbjct: 220 -----EARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVT 274
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ LC GR A++L + +G +P+ TY + A L+++M+
Sbjct: 275 FTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQ 334
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN+ Y ILI ++ +E+++ + L ++ +YT L+ LC++
Sbjct: 335 RSTV-KPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLI 393
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EA + F +M E G P K + + +G +Q R+L +++
Sbjct: 394 IEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEM 438
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 126/244 (51%), Gaps = 11/244 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M+ R P +V ++ L + + R +E + ++ E+ GIE D+ S SI
Sbjct: 53 MLLRKPLPCIVEFSKLFSSIVRMG------HYETVVYLSK----EIEFLGIEQDIHSLSI 102
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+++ + H+ L L+ + + G+ P++ T+T+++ LC G+++ L +M+ G
Sbjct: 103 LINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRG 162
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
+ P+ TYN AN A+ +QM++ CVPN+ Y+ LI + +MD
Sbjct: 163 LQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVG-CVPNVVNYSTLIDGYCLRGQMDEA 221
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
R +++ + ++ +YT L++G C+ ++ +EA Q E + KGL+P VTF T+ G
Sbjct: 222 RSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISG 281
Query: 270 LIQS 273
L ++
Sbjct: 282 LCRA 285
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 121/262 (46%), Gaps = 11/262 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y++LI G+C ++D A M+ +G PNV TY L+NG C+ ER
Sbjct: 199 VPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKI------ER 252
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ + ++ DE +G+ PD+ +F+ ++ RA +P + ++ G P +
Sbjct: 253 IEEAV----QLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIM 308
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC G +E+A L EM R+ V P+ Y +L+ ++
Sbjct: 309 TYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRL 368
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L PN++TY L+G + +++ ++ D +Y ++I G + +
Sbjct: 369 IDEGL-KPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKD 427
Query: 241 WKEACQYFVEMIEKGLLPQKVT 262
A Q EM+ +G T
Sbjct: 428 PSMARQLVEEMVNRGFSADAAT 449
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +LI G C++ +D+A R EMI+ G +P+V T+ +L+ G C+ +L
Sbjct: 362 VPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNL----- 416
Query: 61 FEKTIRNAEKVFDEMRVRGIEPD-----------------VTSFSIVLHVYSRAHKPQL- 102
A+++FDEM RG++PD +F + + +R P L
Sbjct: 417 -----PMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLI 471
Query: 103 -------SLDKLNFMKE----------KGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
L KL +KE G+ P TYTS++ G + A + EM
Sbjct: 472 TYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEM 531
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+ G+ PS TY Y R A+ + +M E + PN+ TYN LI + +
Sbjct: 532 LSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVH-PNVITYNALINGLCKVRK 590
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
MD + + ++ + + +YT+LI+ C W+EA + + +M+++ + P T
Sbjct: 591 MDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSA 650
Query: 266 LYRGL 270
L + L
Sbjct: 651 LLKHL 655
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 137/300 (45%), Gaps = 16/300 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + Y +++YG CK R+ A + L M+ + + P++V+YN L+ G R +
Sbjct: 292 VPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGN------ 345
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A +F E+R RG+ P V +++ ++ R +++ + M + G P V
Sbjct: 346 ----IGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVF 401
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+T +V+ C G + A+EL EM+ G+ P Y D + A + +M
Sbjct: 402 TFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEM 461
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
P++ TYN+ I L + E+ + + L D +YT +IH
Sbjct: 462 LARGFP-PDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 520
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL-----YRGLIQSDMLRTWRRLKKKLDEESITFGS 295
++A F+EM+ KG+ P VT+ L RG ++ +L + +K + IT+ +
Sbjct: 521 LRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNA 580
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 11/264 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y +++ +CK ++ A + L +M + G PN VTYNVL+NG+ L
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGEL------ 241
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+++ EM G+E ++ ++ Y + + M +G PT+ T
Sbjct: 242 ----EQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVT 297
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GR+ DA +LL MV + P +YN Y + A L+ +++
Sbjct: 298 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 357
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L VP++ TYN LI + +D+ + + + D+ ++T+L+ G C+
Sbjct: 358 FRGL-VPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNL 416
Query: 242 KEACQYFVEMIEKGLLPQKVTFET 265
A + F EM+ +GL P + + T
Sbjct: 417 PMAKELFDEMLNRGLQPDRFAYIT 440
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 15/270 (5%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
+M+ +G+ P++ N +L + R S +I A +V++ M GI P V +++
Sbjct: 144 KMVSKGMLPDLKNCNRVLRLLRDRDS---------SIDVAREVYNVMVECGIRPTVVTYN 194
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
+L + + K Q +L L M++ G P TY +V L G +E A+EL+ EM+R
Sbjct: 195 TMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRL 254
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G+ SA TY+ + Y + + A +L +M VP + TYN ++ R+
Sbjct: 255 GLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRG-AVPTLVTYNTIMYGLCKWGRVSD 313
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
R++ + + L DL SY LI+G EA F E+ +GL+P VT+ TL
Sbjct: 314 ARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLID 373
Query: 269 GLIQSDMLRTWRRLKKKL-----DEESITF 293
GL + L RLK ++ D + TF
Sbjct: 374 GLCRMGDLDVAMRLKDEMIKHGPDPDVFTF 403
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 119/279 (42%), Gaps = 61/279 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPN----------------------- 38
P+V +T L+ G+CK+ + MA+ EM+ RG++P+
Sbjct: 398 PDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGM 457
Query: 39 ------------VVTYNVLLNGVCRRASLHPNERFEKT---------------------- 64
++TYNV ++G+ + +L K
Sbjct: 458 QEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLM 517
Query: 65 ---IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+R A VF EM +GI P V ++++++H Y+ + +L++ M EKG+ P V T
Sbjct: 518 AGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVIT 577
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC +++ A + EM G+SP+ TY E A++LY+ M
Sbjct: 578 YNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDML 637
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
+ ++ P+ T++ L+ + +VR + N + E
Sbjct: 638 DREI-QPDSCTHSALLKHLNKDYKSHVVRHLENVIAAGE 675
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 127/286 (44%), Gaps = 11/286 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y L+ G ++ A+ + EM+ G+E + TY+ L+ G C + L
Sbjct: 222 LPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLD---- 277
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++ +EM RG P + +++ +++ + + + L+ M K + P +
Sbjct: 278 ------EASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLV 331
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y +++ G I +A L E+ G+ PS TYN D + AM+L +M
Sbjct: 332 SYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEM 391
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P++ T+ IL+ F L + M +E+++ + L D +Y I G +
Sbjct: 392 IKHG-PDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGD 450
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A EM+ +G P +T+ GL + L+ L KK+
Sbjct: 451 PSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKM 496
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 132/272 (48%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +I G+C + A + M++RG N+VTYN ++ G C +
Sbjct: 423 PNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN------- 475
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ D MR G +PD S++ ++ + + K + + N M + G+CP T
Sbjct: 476 ---TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C +++ A LL M R+G P+ +TYN + + +GA +L + M
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ + PN+ TY +I + E++N + +L +Y+ LI L ++ K
Sbjct: 593 EEGI-FPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+EA F E+ GL+P ++T+ + I S
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMS 683
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 30/308 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YTS+I G C+ + +D A + +M + G EPN VTY+ L+NG+C + NE F
Sbjct: 248 PDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV--NEAF 305
Query: 62 E---------------------------KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
+ +A ++F +M+ +G EP+V +++ ++
Sbjct: 306 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ ++++ + M G+ P TY +++ L RI+ A +L M RNG SP+
Sbjct: 366 CVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNI 425
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TYN K Y D AM + M + N+ TYN +I + I +
Sbjct: 426 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA-NLVTYNTIIKGYCDSGNTTSALRILD 484
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
++ D SYT LI G C+ K + A F EM++ GL P +VT+ L G + +
Sbjct: 485 LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDE 544
Query: 275 MLRTWRRL 282
L T L
Sbjct: 545 KLDTATSL 552
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 136/315 (43%), Gaps = 26/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLN-------------- 47
PNV YT+LI G C + +A M GV PN VTYN L+N
Sbjct: 353 PNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412
Query: 48 -GVCRRASLHPN-ERFEKTIRN---------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ R PN + + I+ A V + M RG ++ +++ ++ Y
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +L L+ M++ G P +YT ++ C ++E A L EMV +G+ P+ T
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y Y + + A L MK C PN+ TYN+LI N E+ +
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSG-CRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ ++ +YT +I GLC+ A + F +MIE+G LP +T+ +L R L Q +
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 277 RTWRRLKKKLDEESI 291
L +L+ +
Sbjct: 652 EEAENLFAELERHGL 666
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 127/291 (43%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P T I C + + A R +M +G EPNV TY L++G+C
Sbjct: 317 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC---------- 366
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A +F M G+ P+ +++ ++++ + + + LN M G P +
Sbjct: 367 VSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++K C G + A ++ M++ G S + TYN K Y + A+++ M
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ D C P+ +Y LI F +++M+ ++N + L + +YT LI G C+ +K
Sbjct: 487 R-DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A M G P T+ L GL + + L K + EE I
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ +Y ++I CK + AE + ++ E + P+ TY ++ G CR+ L
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLD----- 267
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A +VF++M G EP+ ++S +++ + + + D + M GI PT T
Sbjct: 268 -----SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T + LC G EDA L +M G P+ TY A+ L+ +M
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMS 382
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + PN TYN LI + + R+ + N + + ++ +Y +I G C
Sbjct: 383 RDGV-FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
K+A M+++G VT+ T+ +G S
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDS 473
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 130/330 (39%), Gaps = 70/330 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV+ Y LI+G K N AE MIE G+ PNVVTY +++G+C+ S
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS------- 615
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F++M +G P++ ++S ++ + K + + + ++ G+ P T
Sbjct: 616 ---TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY------------------------ 157
Y +++ G++E A LG M++ G P+ TY
Sbjct: 673 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDV 732
Query: 158 --NCFFKEYRGRKDANGAM---------------------------------KLYRQMKE 182
NC F +DA M +L M
Sbjct: 733 VPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS 792
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
LC P+ YN L+ + + +D+ ++ H+ + L+ Y LI LC+ + K
Sbjct: 793 QGLC-PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 851
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA F M+ + P V L GL++
Sbjct: 852 EARITFENMLMRTWNPDDVVQAVLIDGLLR 881
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 113/240 (47%), Gaps = 11/240 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M+ GV+PN++ YN ++N +C+ + + +AE + ++ + PD +++
Sbjct: 206 MLSEGVQPNLLIYNAVINALCK----------DGNVADAETIMKKVFESEMSPDTFTYTS 255
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ + R H +L N M ++G P TY++++ LC GR+ +A +L+ EM+ +G
Sbjct: 256 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 315
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
+ P+A T A +L+ MK C PN++TY LI + +
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKG-CEPNVYTYTALISGLCVSGILKVA 374
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+++ + + + +Y LI+ L E ++ K A M G P VT+ + +G
Sbjct: 375 IGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKG 434
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 114/244 (46%), Gaps = 17/244 (6%)
Query: 54 SLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK 113
S H E +T+ D + G+ + ++S +L SR +D+ + M +
Sbjct: 154 SCHSKEAMARTM----SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE 209
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGA 173
G+ P + Y +V+ LC G + DAE ++ ++ + +SP TY + + D + A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM----DMVREIWNHVKGSELGLDLDSYT 229
++++ QM ++ C PN TY+ LI R+ D++RE+ H G+ ++T
Sbjct: 270 LQVFNQMAKEG-CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH------GILPTAHT 322
Query: 230 ML--IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
I LC+ +++A + FV+M KG P T+ L GL S +L+ L ++
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMS 382
Query: 288 EESI 291
+ +
Sbjct: 383 RDGV 386
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 132/272 (48%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +I G+C + A + M++RG N+VTYN ++ G C +
Sbjct: 423 PNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN------- 475
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ D MR G +PD S++ ++ + + K + + N M + G+CP T
Sbjct: 476 ---TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C +++ A LL M R+G P+ +TYN + + +GA +L + M
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ + PN+ TY +I + E++N + +L +Y+ LI L ++ K
Sbjct: 593 EEGI-FPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+EA F E+ GL+P ++T+ + I S
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMS 683
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 30/308 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YTS+I G C+ + +D A + +M + G EPN VTY+ L+NG+C + NE F
Sbjct: 248 PDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV--NEAF 305
Query: 62 E---------------------------KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
+ +A ++F +M+ +G EP+V +++ ++
Sbjct: 306 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ ++++ + M G+ P TY +++ L RI+ A +L M RNG SP+
Sbjct: 366 CVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNI 425
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TYN K Y D AM + M + N+ TYN +I + I +
Sbjct: 426 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA-NLVTYNTIIKGYCDSGNTTSALRILD 484
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
++ D SYT LI G C+ K + A F EM++ GL P +VT+ L G + +
Sbjct: 485 LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDE 544
Query: 275 MLRTWRRL 282
L T L
Sbjct: 545 KLDTATSL 552
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 136/315 (43%), Gaps = 26/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLN-------------- 47
PNV YT+LI G C + +A M GV PN VTYN L+N
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412
Query: 48 -GVCRRASLHPN-ERFEKTIRN---------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ R PN + + I+ A V + M RG ++ +++ ++ Y
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +L L+ M++ G P +YT ++ C ++E A L EMV +G+ P+ T
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y Y + + A L MK C PN+ TYN+LI N E+ +
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSG-CRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ ++ +YT +I GLC+ A + F +MIE+G LP +T+ +L R L Q +
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 277 RTWRRLKKKLDEESI 291
L +L+ +
Sbjct: 652 EEAENLFAELERHGL 666
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 127/291 (43%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P T I C + + A R +M +G EPNV TY L++G+C
Sbjct: 317 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC---------- 366
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A +F M G+ P+ +++ ++++ + + + LN M G P +
Sbjct: 367 VSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++K C G + A ++ M++ G S + TYN K Y + A+++ M
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ D C P+ +Y LI F +++M+ ++N + L + +YT LI G C+ +K
Sbjct: 487 R-DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A M G P T+ L GL + + L K + EE I
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ +Y ++I CK + AE + ++ E + P+ TY ++ G CR+ L
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLD----- 267
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A +VF++M G EP+ ++S +++ + + + D + M GI PT T
Sbjct: 268 -----SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T + LC G EDA L +M G P+ TY A+ L+ +M
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + PN TYN LI + + R+ + N + + ++ +Y +I G C
Sbjct: 383 RDGV-FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
K+A M+++G VT+ T+ +G S
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDS 473
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 130/330 (39%), Gaps = 70/330 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV+ Y LI+G K N AE MIE G+ PNVVTY +++G+C+ S
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS------- 615
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F++M +G P++ ++S ++ + K + + + ++ G+ P T
Sbjct: 616 ---TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY------------------------ 157
Y +++ G++E A LG M++ G P+ TY
Sbjct: 673 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDV 732
Query: 158 --NCFFKEYRGRKDANGAM---------------------------------KLYRQMKE 182
NC F +DA M +L M
Sbjct: 733 VPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS 792
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
LC P+ YN L+ + + +D+ ++ H+ + L+ Y LI LC+ + K
Sbjct: 793 QGLC-PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 851
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA F M+ + P V L GL++
Sbjct: 852 EARITFENMLMRTWNPDDVVQAVLIDGLLR 881
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 113/240 (47%), Gaps = 11/240 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M+ GV+PN++ YN ++N +C+ + + +AE + ++ + PD +++
Sbjct: 206 MLSEGVQPNLLIYNAVINALCK----------DGNVADAETIMKKVFESEMSPDTFTYTS 255
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ + R H +L N M ++G P TY++++ LC GR+ +A +L+ EM+ +G
Sbjct: 256 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 315
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
+ P+A T A +L+ MK C PN++TY LI + +
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKG-CEPNVYTYTALISGLCVSGLLKVA 374
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+++ + + + +Y LI+ L E ++ K A M G P VT+ + +G
Sbjct: 375 IGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKG 434
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 114/244 (46%), Gaps = 17/244 (6%)
Query: 54 SLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK 113
S H E +T+ D + G+ + ++S +L SR +D+ + M +
Sbjct: 154 SCHSKEAMARTM----SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE 209
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGA 173
G+ P + Y +V+ LC G + DAE ++ ++ + +SP TY + + D + A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM----DMVREIWNHVKGSELGLDLDSYT 229
++++ QM ++ C PN TY+ LI R+ D++RE+ H G+ ++T
Sbjct: 270 LQVFNQMAKEG-CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH------GILPTAHT 322
Query: 230 ML--IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
I LC+ +++A + FV+M KG P T+ L GL S +L+ L ++
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 288 EESI 291
+ +
Sbjct: 383 RDGV 386
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+ +A M+ G PN TYNVL++G+C+R T +A K+FDEM RG
Sbjct: 190 VPLALALYNRMVAAGCLPNRATYNVLMDGLCKRG----------TAVDALKLFDEMLQRG 239
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
I P+V + +I+L A + + + + LN M++KG P TY + + LC GR+++A
Sbjct: 240 ITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAI 299
Query: 140 ELLGEMVRNGV-SPSAETYNCF-------------FKEY--------------------R 165
E L + R G + Y+C F+ Y R
Sbjct: 300 ERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIR 359
Query: 166 GRKDA---NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222
G +A + A + +MKE P+ YN L+ +D R + + + + +
Sbjct: 360 GCAEAGRIDDAFAFFDEMKEKRF-TPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVV 418
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
LD +++T++IHGLC+KQ EA Q F M+E G P +T+ L GL ++ L R L
Sbjct: 419 LDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARML 478
Query: 283 KKKLD 287
K++
Sbjct: 479 FYKME 483
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 150/341 (43%), Gaps = 50/341 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-ER 60
PNVK +T L+ C ++ AE L M ++G P+ VTYN L+G+C+ + ER
Sbjct: 242 PNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIER 301
Query: 61 FEKTIRNAEKVF---------DEMRVRG-----------------IEPDVTSFSIVLHVY 94
E R V D + + G PD+ ++I++
Sbjct: 302 LEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGC 361
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ A + + + MKEK P Y +++K LC G ++ A L+ EM +N V
Sbjct: 362 AEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDT 421
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR---- 210
T+ ++ + AM+++ M E C P + TYN+LI +R++ R
Sbjct: 422 NTHTIMIHGLCKKQLVDEAMQVFDGMVEVG-CHPTVMTYNVLIDGLYRAHRLEEARMLFY 480
Query: 211 --EIWNHVK-------GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
E+ N+ G+ D +S L+ +C+ + +A + +++ G++P V
Sbjct: 481 KMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVV 540
Query: 262 TFETLYRGLIQ----SDMLRTWRRLKKK---LDEESITFGS 295
T+ TL GL + LR +R L+ K LDE IT+G+
Sbjct: 541 TYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDE--ITYGT 579
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 119/293 (40%), Gaps = 34/293 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +YT +I G + RID A F EM E+ P+ YN LL +C L
Sbjct: 349 PDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLD----- 403
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + EM + D + +I++H + ++ + M E G PTV T
Sbjct: 404 -----GARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMT 458
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR---KDANGAMKLYR 178
Y ++ L R+E+A L +M G +PS F + G KD+ KL
Sbjct: 459 YNVLIDGLYRAHRLEEARMLFYKM-EVGNNPS-----LFLRLTLGANQVKDSESLQKLVD 512
Query: 179 QMKE---------------DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223
M + D VP++ TYN L+ + +D ++ ++ L
Sbjct: 513 SMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSL 572
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
D +Y LI L ++ +A F +++ G P + ++ R L + + L
Sbjct: 573 DEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKL 625
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
L+ C+ ++ A + L +++ GV P+VVTYN LLNG+C+ + + A
Sbjct: 510 LVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCK----------VRNLDGAL 559
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
++F E++V+G D ++ ++ RAH+ ++ + G P+++ Y S+++ L
Sbjct: 560 RLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSL 619
Query: 130 CSCGRIEDA 138
C ++ A
Sbjct: 620 CRMNKLSQA 628
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/142 (18%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR-MD 207
G+ P A + + + A+ + +M+ + C P YN ++ + +A +
Sbjct: 132 GLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVP 191
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ ++N + + + +Y +L+ GLC++ +A + F EM+++G+ P T L
Sbjct: 192 LALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILL 251
Query: 268 RGLIQSDMLRTWRRLKKKLDEE 289
+ + L+ L ++++
Sbjct: 252 SSMCNAGQLKEAENLLNSMEDK 273
>gi|449458793|ref|XP_004147131.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g19280-like [Cucumis sativus]
gi|449503522|ref|XP_004162044.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g19280-like [Cucumis sativus]
Length = 532
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 141/310 (45%), Gaps = 22/310 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIER-----------------GVEPNVVTYNV 44
P++ +Y S+I + N+ MA L EM + G +P+VV Y
Sbjct: 217 PSIWVYKSVIKALLQTNQSGMAWDLLEEMHRQEGNLGKGWKVLLELRNFGSKPDVVDYTT 276
Query: 45 LLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL 104
++N +C+ + L + + AE +F++M V G++PDV ++I++ Y + +
Sbjct: 277 VINSLCKVSLLKEATALD--VEMAEVMFEKMIVEGLKPDVVVYNILMDAYGKKGYMHKAF 334
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
L+ M+ + P V TY +++ L G +++A+++L E++R G S TY Y
Sbjct: 335 KLLDMMRSTNVTPDVVTYNTLINGLVMRGFLQEAKDILDELIRRGFSVDVVTYTNIIHGY 394
Query: 165 RGRKDANGAMKLYRQMKEDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223
R + A L+ M E+ CV P++ T + L+ + RMD ++ + L
Sbjct: 395 STRGNFEEAFLLWYHMAEN--CVTPDVVTCSALLSGYCREKRMDEANALFCKMLDIGLKP 452
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
DL Y LIHG C E C +MIE ++P VT L G + + +
Sbjct: 453 DLILYNTLIHGFCSVGNVDEGCNLVKKMIESSIIPNNVTHRALVLGFQKKRVTDPIQSAT 512
Query: 284 KKLDEESITF 293
KL E I +
Sbjct: 513 SKLQEILIAY 522
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 132/272 (48%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +I G+C + A + M++RG N+VTYN ++ G C +
Sbjct: 423 PNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN------- 475
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ D MR G +PD S++ ++ + + K + + N M + G+CP T
Sbjct: 476 ---TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C +++ A LL M R+G P+ +TYN + + +GA +L + M
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ + PN+ TY +I + E++N + +L +Y+ LI L ++ K
Sbjct: 593 EEGI-FPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+EA F E+ GL+P ++T+ + I S
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMS 683
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 136/315 (43%), Gaps = 26/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLN-------------- 47
PNV YT+LI G C + +A M GV PN VTYN L+N
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412
Query: 48 -GVCRRASLHPN-ERFEKTIRN---------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ R PN + + I+ A V + M RG ++ +++ ++ Y
Sbjct: 413 LNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +L L+ M++ G P +YT ++ C ++E A L EMV +G+ P+ T
Sbjct: 473 SGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y Y + + A L MK C PN+ TYN+LI N E+ +
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSG-CRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ ++ +YT +I GLC+ A + F +MIE+G LP +T+ +L R L Q +
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 277 RTWRRLKKKLDEESI 291
L +L+ +
Sbjct: 652 EEAENLFAELERHGL 666
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 30/308 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YTS+I G C+ + +D A + +M + G EPN VTY+ L+NG+C + NE F
Sbjct: 248 PDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV--NEAF 305
Query: 62 E---------------------------KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
+ +A ++F +M+ +G EP+V +++ ++
Sbjct: 306 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ ++++ + M G+ P TY +++ L RI+ A +L M RNG SP+
Sbjct: 366 CVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNI 425
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TYN K Y D AM + M + N+ TYN +I + I +
Sbjct: 426 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA-NLVTYNTIIKGYCDSGNTTSALRILD 484
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
++ D SYT LI G C+ K + A F EM++ GL P +VT+ L G + +
Sbjct: 485 LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDE 544
Query: 275 MLRTWRRL 282
L T L
Sbjct: 545 KLDTATSL 552
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 127/291 (43%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P T I C + + A R +M +G EPNV TY L++G+C
Sbjct: 317 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC---------- 366
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A +F M G+ P+ +++ ++++ + + + LN M G P +
Sbjct: 367 VSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++K C G + A ++ M++ G S + TYN K Y + A+++ M
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ D C P+ +Y LI F +++M+ ++N + L + +YT LI G C+ +K
Sbjct: 487 R-DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A M G P T+ L GL + + L K + EE I
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ +Y ++I CK + AE + ++ E + P+ TY ++ G CR+ L
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLD----- 267
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A +VF++M G EP+ ++S +++ + + + D + M GI PT T
Sbjct: 268 -----SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T + LC G EDA L +M G P+ TY A+ L+ +M
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + PN TYN LI + + R+ + N + + ++ +Y +I G C
Sbjct: 383 RDGV-FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
K+A M+++G VT+ T+ +G S
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDS 473
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 130/330 (39%), Gaps = 70/330 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV+ Y LI+G K N AE MIE G+ PNVVTY +++G+C+ S
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS------- 615
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F++M +G P++ ++S ++ + K + + + ++ G+ P T
Sbjct: 616 ---TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEIT 672
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY------------------------ 157
Y +++ G++E A LG M++ G P+ TY
Sbjct: 673 YVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDV 732
Query: 158 --NCFFKEYRGRKDANGAM---------------------------------KLYRQMKE 182
NC F +DA M +L M
Sbjct: 733 VPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMIS 792
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
LC P+ YN L+ + + +D+ ++ H+ + L+ Y LI LC+ + K
Sbjct: 793 QGLC-PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 851
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
EA F M+ + P V L GL++
Sbjct: 852 EARITFENMLMRTWNPDDVVQAVLIDGLLR 881
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 113/240 (47%), Gaps = 11/240 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M+ GV+PN++ YN ++N +C+ + + +AE + ++ + PD +++
Sbjct: 206 MLSEGVQPNLLIYNAVINALCK----------DGNVADAETIMKKVFESEMSPDTFTYTS 255
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ + R H +L N M ++G P TY++++ LC GR+ +A +L+ EM+ +G
Sbjct: 256 MILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHG 315
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
+ P+A T A +L+ MK C PN++TY LI + +
Sbjct: 316 ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKG-CEPNVYTYTALISGLCVSGLLKVA 374
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+++ + + + +Y LI+ L E ++ K A M G P VT+ + +G
Sbjct: 375 IGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKG 434
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 114/244 (46%), Gaps = 17/244 (6%)
Query: 54 SLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK 113
S H E +T+ D + G+ + ++S +L SR +D+ + M +
Sbjct: 154 SCHSKEAMARTM----SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE 209
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGA 173
G+ P + Y +V+ LC G + DAE ++ ++ + +SP TY + + D + A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM----DMVREIWNHVKGSELGLDLDSYT 229
++++ QM ++ C PN TY+ LI R+ D++RE+ H G+ ++T
Sbjct: 270 LQVFNQMAKEG-CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH------GILPTAHT 322
Query: 230 ML--IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
I LC+ +++A + FV+M KG P T+ L GL S +L+ L ++
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 288 EESI 291
+ +
Sbjct: 383 RDGV 386
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ +Y LI+G CK + A L EM + P+V TY +L+NG+C
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLC----------I 386
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A ++F +M+ I P +++ ++H Y + + + +LD + M G+ P + T
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++++ C+ I+ A L EM G+ P TY + + A++LY M
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMV----------REIWNHVKGSELGLDLDSYTML 231
E + PN HT+ L+ F R+ + R WNHV +T L
Sbjct: 507 EAGI-HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHV----------GFTCL 555
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG-----------LIQSDMLRT 278
I GLC+ A ++F +M G+ P ++ ++ +G ++Q DM++T
Sbjct: 556 IEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKT 613
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 134/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +YT I C+ N+++ AE+ M + GV PN+ TY+ +++G C+ +
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN------- 284
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+R A ++ E+ V + P+V F ++ + +A + + M + G+ P +
Sbjct: 285 ---VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV 341
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C G + +A LL EM +SP TY A +L+++MK
Sbjct: 342 YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK 401
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+ TYN LI + M+ ++ + + S + ++ +++ LI G C +
Sbjct: 402 NERI-FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDI 460
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K A + EM KG++P VT+ L + ++ RL + E I
Sbjct: 461 KAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 128/270 (47%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y+++I G+CK + A E++ + PNVV + L++G C+
Sbjct: 266 LPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK--------- 316
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A +F M G++P++ ++ ++H + ++ ++ L+ M+ + P V
Sbjct: 317 -ARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF 375
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ LC ++ +A L +M + PS+ TYN Y + A+ L +M
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ PNI T++ LI + + + ++ + + D+ +YT LI ++
Sbjct: 436 TASGV-EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEAN 494
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
KEA + + +M+E G+ P TF L G
Sbjct: 495 MKEALRLYSDMLEAGIHPNDHTFACLVDGF 524
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 11/269 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +Y L K E+ L EM G++PNV Y + + +CR
Sbjct: 196 VPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR--------- 246
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + AEK+F+ M+ G+ P++ ++S ++ Y + + + + + P V
Sbjct: 247 -DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVV 305
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ ++V C + A L MV+ GV P+ YNC + + A+ L +M
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +L P++ TY ILI +++ ++ +K + +Y LIHG C++
Sbjct: 366 ESLNLS-PDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN 424
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++A EM G+ P +TF TL G
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDG 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 23/253 (9%)
Query: 45 LLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH------VYSRAH 98
+LNG+ RR RF+ + + M RG+ PDV + ++ +YS+
Sbjct: 170 ILNGLVRR------RRFDSVWVD----YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKE 219
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
K L+ M GI P V YT + LC ++E+AE++ M ++GV P+ TY+
Sbjct: 220 K------LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYS 273
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
Y + A LY+++ +L +PN+ + L+ F + R ++ H+
Sbjct: 274 AMIDGYCKTGNVRQAYGLYKEILVAEL-LPNVVVFGTLVDGFCKARELVTARSLFVHMVK 332
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
+ +L Y LIHG C+ EA EM L P T+ L GL D +
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392
Query: 279 WRRLKKKLDEESI 291
RL +K+ E I
Sbjct: 393 ANRLFQKMKNERI 405
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 133/269 (49%), Gaps = 15/269 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V+ YT+LI G CK +ID A R EM + P+VVTYN+L+NG +S
Sbjct: 150 LPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSS------ 203
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+++ E + DEM +G++P+ ++++V+ Y + K + ++L M+E G P
Sbjct: 204 ---SLKGFE-LIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCV 259
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++ C GR+ +A ++ EM R G+ ++ T N G + + A KL
Sbjct: 260 TFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSA 319
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ V + +++G F W+ +K E+ + +Y +I GLC K
Sbjct: 320 SKRGYFVDEVSYGTLIMGYFKVGKSX-----XWDEMKEKEIIPSIITYGTMIGGLCRSGK 374
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ E++E GL+P + T+ T+ G
Sbjct: 375 TDQSIDKCNELLESGLVPDQTTYNTIILG 403
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 144/331 (43%), Gaps = 51/331 (15%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + LI G C N++ A +G+M P+ V+YN +L+ +C++ L+
Sbjct: 47 NTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNE----- 101
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A + +M+ G+ P+ +F+I++ Y + + + + ++ M + P V TY
Sbjct: 102 -----ARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTY 156
Query: 123 TSVVKCLCSCGRIEDA-----------------------------------EELLGEMVR 147
T+++ LC G+I++A EL+ EM
Sbjct: 157 TTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEG 216
Query: 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
GV P+A TYN K Y + A R+M+E P+ T+N L + R+
Sbjct: 217 KGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFS-PDCVTFNTLSNGYCKAGRLS 275
Query: 208 MVREIWNHVKGSELGLDLDSYTM--LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ + + S GL ++S T+ ++H LC ++K +A + ++G +V++ T
Sbjct: 276 EAFRMMDEM--SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGT 333
Query: 266 LYRGLIQSDMLRTWRRLK-KKLDEESITFGS 295
L G + W +K K++ IT+G+
Sbjct: 334 LIMGYFKVGKSXXWDEMKEKEIIPSIITYGT 364
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 123/281 (43%), Gaps = 22/281 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
P+ + +L G+CK R+ A R + EM +G++ N VT N +L+ +C
Sbjct: 256 PDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKL 315
Query: 51 -----RRASLHPNERFEKTIRNAEKV-----FDEMRVRGIEPDVTSFSIVLHVYSRAHKP 100
+R + I KV +DEM+ + I P + ++ ++ R+ K
Sbjct: 316 LSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKT 375
Query: 101 QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
S+DK N + E G+ P TY +++ C G+++ A +MV+ P T N
Sbjct: 376 DQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNIL 435
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
+ + A+KL++ + + T+N +I R + ++ ++ +
Sbjct: 436 VRGLCTEGMLDKALKLFKTWISKGKAIDAV-TFNTIISGLCEEGRFEEAFDLLAEMEEKK 494
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
LG D ++ ++ L + + KEA ++ ++E+G L +
Sbjct: 495 LGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQT 535
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 13/275 (4%)
Query: 22 MAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE 81
+++ ++I+ GVE N T+N+L+ G C E + A + +M+
Sbjct: 31 LSKAIFSDVIKLGVEVNTNTFNILICGCC----------IENKLSEAIGLIGKMKHFSCF 80
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
PD S++ +L V + K + D L MK G+ P T+ +V C G +++A E+
Sbjct: 81 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEV 140
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMF 200
+ M RN V P TY + A +L +M+ L +P++ TYN+LI G F
Sbjct: 141 IDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKL-LPHVVTYNMLINGCF 199
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
+ + E+ + ++G + + +Y +++ ++ K A +M E G P
Sbjct: 200 ECSSSLKGF-ELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDC 258
Query: 261 VTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
VTF TL G ++ L R+ ++ + + S
Sbjct: 259 VTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNS 293
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 125/271 (46%), Gaps = 13/271 (4%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
++PN++T N L+ + R S P+ K I F ++ G+E + +F+I++
Sbjct: 6 LKPNLLTLNTLIKALVRYPS-KPSVYLSKAI------FSDVIKLGVEVNTNTFNILICGC 58
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+K ++ + MK P +Y +++ LC G++ +A +LL +M NG+ P+
Sbjct: 59 CIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNR 118
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
T+N Y A ++ M +++ +P++ TY LIG ++D + +
Sbjct: 119 NTFNILVSGYCKLGWLKEAAEVIDIMARNNV-LPDVRTYTTLIGGLCKDGKIDEAFRLRD 177
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
++ +L + +Y MLI+G E + + EM KG+ P VT+ + + ++
Sbjct: 178 EMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEG 237
Query: 275 MLRTWRRLKKKLDE-----ESITFGSEFQNY 300
+ +K++E + +TF + Y
Sbjct: 238 KMDNAGNELRKMEESGFSPDCVTFNTLSNGY 268
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 76/149 (51%), Gaps = 10/149 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I G+C+ ++D A F +M+++ +P++ T N+L+ G+C
Sbjct: 391 VPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCT--------- 441
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A K+F +G D +F+ ++ + + + D L M+EK + P
Sbjct: 442 -EGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCY 500
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
T+ +++ L GR+++AEE + +V G
Sbjct: 501 THNAILSALADAGRMKEAEEFMSGIVEQG 529
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 144/298 (48%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G+ K +D A EM++RG+ PNVVTY+ ++ +C+
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCK---------- 246
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A +V M G+ P+ +++ ++H Y + +P+ ++ L M G+ P V T
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR +A ++ M + G+ P TY + Y + L M
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN + ++ILI + ++D +++ ++ L D +Y +I LC+ +
Sbjct: 367 RNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
++A +YF +MI++ L P + + +L L D + L ++ + I + F N
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 143/310 (46%), Gaps = 58/310 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN + Y S+++G+C + A FL +M GVEP+VVTYN L++ +C+ N R
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK------NGR 319
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTS---------------------------------- 86
+ A K+FD M RG++P++T+
Sbjct: 320 CTE----ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375
Query: 87 -FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
FSI++ Y++ K ++ + M+++G+ P TY +V+ LC GR+EDA +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 146 VRNGVSPSAETYN------CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
+ +SP YN C F ++ + A +L +M + +C+ I +N +I
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKW------DKAKELILEMLDRGICLDTIF-FNSIIDS 488
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
R+ ++++ + + D+ +Y+ LI G C K EA + M+ G+ P
Sbjct: 489 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548
Query: 260 KVTFETLYRG 269
VT+ TL G
Sbjct: 549 CVTYNTLING 558
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 130/266 (48%), Gaps = 11/266 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y+S+I CK +D A L M++ GV PN TYN +++G C +S P E
Sbjct: 231 LPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC--SSGQPKE- 287
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +M G+EPDV +++ ++ + + + + M ++G+ P +
Sbjct: 288 -------AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++++ + G + + LL MVRNG+ P+ ++ Y + + AM ++ +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L P+ TY +IG+ R++ + + L Y LIH LC K
Sbjct: 401 RQQGL-NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
W +A + +EM+++G+ + F ++
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSI 485
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 139/298 (46%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +Y SLI+ C ++ D A+ + EM++RG+ + + +N +++ C+
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK---------- 491
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +EK+FD M G++PD+ ++S ++ Y A K + L M G+ P T
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R+EDA L EM +GVSP TYN + + A +LY +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + + TYNI++ N D ++ ++ ++L L+ ++ ++I L + +
Sbjct: 612 ESGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
EA F + GL+P T+ + LI+ +L L ++E T S N
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 15/295 (5%)
Query: 7 YTSLIYGWCKINRI-DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+T ++ G C R D + L M + G PNV +YN+LL G+C + R ++ +
Sbjct: 129 FTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLC------DDNRSQEAL 182
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+ + D+ PDV S++ V++ + + + + M ++GI P V TY+S+
Sbjct: 183 ELLQMMPDDGG--DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ LC ++ A E+L MV+NGV P+ TYN Y A+ ++M D +
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGV 300
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
P++ TYN L+ R R++++ + L ++ +Y L+ G K E
Sbjct: 301 -EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 359
Query: 246 QYFVEMIEKGLLPQKVTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFGS 295
M+ G+ P F L +G + ML + ++ L+ +++T+G+
Sbjct: 360 GLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 137/301 (45%), Gaps = 13/301 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVE--PNVVTYNVLLNGVCRRASLHPN 58
+PNV Y L+ G C NR A L M + G + P+VV+Y ++NG + L
Sbjct: 159 IPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLD-- 216
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
A + EM RGI P+V ++S ++ +A +++ L M + G+ P
Sbjct: 217 --------KAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
TY S+V CS G+ ++A L +M +GV P TYN A K++
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M + L P I TY L+ + + + + + + + + + +++LI ++
Sbjct: 329 SMTKRGL-KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
K +A F +M ++GL P VT+ T+ L +S + R +++ +E ++ G+
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVY 447
Query: 299 N 299
N
Sbjct: 448 N 448
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 6/215 (2%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
+A VFDE+ RG + + L +R H P ++ + N M G + P + TY
Sbjct: 37 DARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C GR++ LG +++ G A + K K + AM + +
Sbjct: 96 ILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCEKQKW 241
C+PN+ +YNIL+ NR E+ + G + D+ SYT +I+G ++
Sbjct: 156 LGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+A + EM+++G+LP VT+ ++ L ++ +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 27/281 (9%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V PN+ TY +L+ C L + + N K +G D +F+ +L
Sbjct: 87 VTPNLCTYGILMGSCCCAGRL---DLGFAALGNVIK-------KGFIVDAIAFTPMLKGL 136
Query: 95 SRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG--VS 151
+ ++D L M + G P V +Y ++K LC R ++A ELL M +G
Sbjct: 137 CADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCP 196
Query: 152 PSAETY----NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
P +Y N FFKE D + A Y +M + + +PN+ TY+ +I MD
Sbjct: 197 PDVVSYTTVINGFFKE----GDLDKAYGTYHEMLDRGI-LPNVVTYSSIIAALCKAQAMD 251
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
E+ + + + + +Y ++HG C + KEA + +M G+ P VT+ +L
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311
Query: 268 RGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNYHFK 303
L ++ R++ K+ L E T+G+ Q Y K
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--DDLCVPNIHTY 193
EDA + E++R G S NC + R A+ Y +M D PN+ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADV-ARHSPAAAVSRYNRMARAGADEVTPNLCTY 94
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV-EMI 252
IL+G R+D+ +V +D ++T ++ GLC ++ +A + M
Sbjct: 95 GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMT 154
Query: 253 EKGLLPQKVTFETLYRGL 270
+ G +P ++ L +GL
Sbjct: 155 QLGCIPNVFSYNILLKGL 172
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 138/301 (45%), Gaps = 27/301 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
PN+ +TSLI G CK I A L EM+ G +PNV T+ L++G+C+R R
Sbjct: 308 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 367
Query: 61 FEKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
F K +R+ AE +F M+ +G+ P+V +++ +++ +
Sbjct: 368 FLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 427
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A + + +N M ++G P + TY +V+ LC R +A ELL + G+
Sbjct: 428 KAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGV 487
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY +E + D A+ + +M + ++ NILI F +M ++
Sbjct: 488 TYTILIQEQCKQSDIKQALAFFCRMNKTGF-EADMRLNNILIAAFCRQKKMKESERLFQL 546
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
V L ++YT +I G C++ + A +YF M G +P T+ +L GL + M
Sbjct: 547 VVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 606
Query: 276 L 276
+
Sbjct: 607 V 607
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
++ + +I R++ A + +M +G+ P+ +T N +L I AE
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESG----------LIDYAE 225
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT-------- 121
VFDEM VRG+ PD +SF +++ R K Q + L+ M ++G P AT
Sbjct: 226 NVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSAL 285
Query: 122 ---------------------------YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+TS++ LC G I+ A E+L EMVRNG P+
Sbjct: 286 CENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV 345
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
T+ R A +L+ ++ D+ PN+HTY +IG + ++++ +++
Sbjct: 346 YTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFS 405
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+K L ++++YT LI+G C+ + A + M ++G P T+ + L
Sbjct: 406 RMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSL 461
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 118/266 (44%), Gaps = 12/266 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + ++ G + +I A+R+L MI+RG P+ T ++L+ +C
Sbjct: 238 PDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENG-------- 289
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A F +M G +P++ +F+ ++ + + + + L M G P V T
Sbjct: 290 --LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYT 347
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGV-SPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+T+++ LC G E A L ++VR+ + P+ TY Y N A L+ +M
Sbjct: 348 HTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM 407
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
KE L PN++TY LI D E+ N + ++ +Y +I LC+K +
Sbjct: 408 KEQGL-FPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSR 466
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
EA + + GL VT+ L
Sbjct: 467 APEAYELLNKAFSCGLEADGVTYTIL 492
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 12/257 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ T ++ C+ ++ A + +MI+ G +PN++ + L++G+C++ S
Sbjct: 272 IPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS------ 325
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDV-TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
I+ A ++ +EM G +P+V T +++ + R + L ++ P V
Sbjct: 326 ----IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNV 381
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYTS++ C ++ AE L M G+ P+ TY + + + A +L
Sbjct: 382 HTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNL 441
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M +D+ PNI+TYN +I +R E+ N L D +YT+LI C++
Sbjct: 442 M-DDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQS 500
Query: 240 KWKEACQYFVEMIEKGL 256
K+A +F M + G
Sbjct: 501 DIKQALAFFCRMNKTGF 517
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 122/307 (39%), Gaps = 49/307 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PNV YT+LI G CK D A + M + G PN+ TYN +++ +C++ S P
Sbjct: 414 PNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKK-SRAPEAYE 472
Query: 58 --NERF--------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
N+ F + I+ A F M G E D+ +I++ +
Sbjct: 473 LLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFC 532
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
R K + S + G+ PT TYTS++ C G + A + M R+G P +
Sbjct: 533 RQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSF 592
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI------HTY---NILIGMFMALNRM 206
TY + + A KLY M + L P + + Y N + L +
Sbjct: 593 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPL 652
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D +++W + + L+ LC ++K A +F +++EK +VT
Sbjct: 653 D--KKLW-----------IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAF 699
Query: 267 YRGLIQS 273
+S
Sbjct: 700 TTACSES 706
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 17/190 (8%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY-----NCFFKEY 164
M+ +G+ P+ T V++ G I+ AE + EM GV P + ++ CF
Sbjct: 196 MQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGK 255
Query: 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV-REIWNHVKGSELGL 223
D + + R +P+ T +++ AL +V R IW K +LG
Sbjct: 256 IQEADRWLSGMIQRGF------IPDNATCTLILS---ALCENGLVNRAIWYFRKMIDLGF 306
Query: 224 --DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 281
+L ++T LI GLC+K K+A + EM+ G P T L GL + R
Sbjct: 307 KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 366
Query: 282 LKKKLDEESI 291
L KL I
Sbjct: 367 LFLKLVRSDI 376
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + YTS+I G+CK D+A ++ M G P+ TY L++G+C+++
Sbjct: 553 VPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKS------- 605
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K+++ M RG+ P + + + Y + + ++ L + +K TV
Sbjct: 606 ---MVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKKLWIRTVR 662
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160
T +V+ LCS ++ A +++ S T F
Sbjct: 663 T---LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAF 699
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 137/291 (47%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y SLI +C+ ++ +A + E+ +RGV N VTYN+L+ G+CR+
Sbjct: 209 LPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQ------ 262
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ AE + + M+ I P +F++++ + +L L +K G+CPT+
Sbjct: 263 ----VSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLV 318
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ G EL+ EM G+SPS TY + D A +++ M
Sbjct: 319 TYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLM 378
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K L VP+ HTY +LI M +++ + L + Y +I+G C++
Sbjct: 379 KRIGL-VPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECN 437
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+A ++ EM++ G+ P ++ + + L + +RL K++ E +
Sbjct: 438 SYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGL 488
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 137/287 (47%), Gaps = 12/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +YT LI C+ ID A+ M + G+ N Y +++NG ++ + + F
Sbjct: 140 PNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKG--YKKDGF 197
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ +M++ G+ P++ +++ ++ Y R K L+ + + ++G+ T
Sbjct: 198 E--------LYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVT 249
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G++ AE LL M R ++P+ T+N + A+ ++K
Sbjct: 250 YNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLK 309
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
LC P + TYNILI F + +V E+ ++ + +YT+L++
Sbjct: 310 LIGLC-PTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDI 368
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL-IQSDMLRTWRRLKKKLD 287
++A + F M GL+P + T+ L GL I+ +M+ + K ++
Sbjct: 369 EKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVE 415
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 12/247 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M+ +G P+ ++N L+ + + +L F F E R + DV SF I
Sbjct: 64 MVLKGHSPSSFSFNNALDLLAKSGNLDRTWGF----------FTEYLGR-TQFDVYSFWI 112
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+ + + L M+ G+ P V YT +++ C G I+ A+ + M G
Sbjct: 113 TIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLG 172
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
++ + Y + + +LY++MK + +PN++TYN LI + ++ +
Sbjct: 173 LAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGV-LPNLYTYNSLITEYCRDGKLSLA 231
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++++ + + + +Y +LI GLC K + +A M + P TF L G
Sbjct: 232 FKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDG 291
Query: 270 LIQSDML 276
L + L
Sbjct: 292 LCNTGQL 298
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P + Y LI G+ K+ + + EM +RG+ P+ VTY +L+N R
Sbjct: 315 PTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEM 374
Query: 52 -----RASLHPNER----------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R L P++ + + A K++ M ++P+ ++ +++ Y +
Sbjct: 375 FHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCK 434
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+L L M + G+ P VA+Y S ++ LC G+ +A+ LL EM G+ P
Sbjct: 435 ECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 4/229 (1%)
Query: 67 NAEKVFD---EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
N K F+ +M G+ P+V ++I++ R + + M + G+ YT
Sbjct: 122 NVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYT 181
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ G +D EL +M GV P+ TYN EY + A K++ ++ +
Sbjct: 182 IMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKR 241
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
+ N TYNILIG ++ + +K + + ++ ML+ GLC + +
Sbjct: 242 GVAC-NAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDK 300
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A Y ++ GL P VT+ L G + L +++++ I+
Sbjct: 301 ALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGIS 349
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 137/291 (47%), Gaps = 11/291 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y SLI +C+ ++ +A + E+ +RGV N VTYN+L+ G+CR+
Sbjct: 209 LPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQ------ 262
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ AE + + M+ I P +F++++ + +L L +K G+CPT+
Sbjct: 263 ----VSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLV 318
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ G EL+ EM G+SPS TY + D A +++ M
Sbjct: 319 TYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLM 378
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K L VP+ HTY +LI M +++ + L + Y +I+G C++
Sbjct: 379 KRIGL-VPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECN 437
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+A ++ EM++ G+ P ++ + + L + +RL K++ E +
Sbjct: 438 SYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGL 488
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 137/287 (47%), Gaps = 12/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +YT LI C+ ID A+ M + G+ N Y +++NG ++ + + F
Sbjct: 140 PNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKG--YKKDGF 197
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ +M++ G+ P++ +++ ++ Y R K L+ + + ++G+ T
Sbjct: 198 E--------LYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVT 249
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G++ AE LL M R ++P+ T+N + A+ ++K
Sbjct: 250 YNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLK 309
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
LC P + TYNILI F + +V E+ ++ + +YT+L++
Sbjct: 310 LIGLC-PTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDI 368
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL-IQSDMLRTWRRLKKKLD 287
++A + F M GL+P + T+ L GL I+ +M+ + K ++
Sbjct: 369 EKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVE 415
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P + Y LI G+ K+ + + EM +RG+ P+ VTY +L+N R
Sbjct: 315 PTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEM 374
Query: 52 -----RASLHPNER----------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R L P++ + + A K++ M ++P+ ++ +++ Y +
Sbjct: 375 FHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCK 434
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+L L M + G+ P VA+Y S ++ LC G+ +A+ LL EM G+ P
Sbjct: 435 ECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 116/277 (41%), Gaps = 12/277 (4%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75
K +D F E + R + +V ++ + + C ++ ++ FE + +M
Sbjct: 85 KSGNLDRTWGFFTEYLGR-TQFDVYSFGITIKAFCENGNV--SKGFE--------LLAQM 133
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
G+ P+V ++I++ R + + M + G+ YT ++ G
Sbjct: 134 ETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYK 193
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
+D EL +M GV P+ TYN EY + A K++ ++ + + N TYNI
Sbjct: 194 KDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVAC-NAVTYNI 252
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
LIG ++ + +K + + ++ ML+ GLC + +A Y ++ G
Sbjct: 253 LIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIG 312
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
L P VT+ L G + L +++++ I+
Sbjct: 313 LCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGIS 349
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 144/298 (48%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G+ K +D A EM++RG+ PNVVTY+ ++ +C+
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCK---------- 246
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A +V M G+ P+ +++ ++H Y + +P+ ++ L M G+ P V T
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR +A ++ M + G+ P TY + Y + L M
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN + ++ILI + ++D +++ ++ L D +Y +I LC+ +
Sbjct: 367 RNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
++A +YF +MI++ L P + + +L L D + L ++ + I + F N
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 143/310 (46%), Gaps = 58/310 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN + Y S+++G+C + A FL +M GVEP+VVTYN L++ +C+ N R
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK------NGR 319
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTS---------------------------------- 86
+ A K+FD M RG++P++T+
Sbjct: 320 CTE----ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375
Query: 87 -FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
FSI++ Y++ K ++ + M+++G+ P TY +V+ LC GR+EDA +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 146 VRNGVSPSAETYN------CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
+ +SP YN C F ++ + A +L +M + +C+ I +N +I
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKW------DKAKELILEMLDRGICLDTIF-FNSIIDS 488
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
R+ ++++ + + D+ +Y+ LI G C K EA + M+ G+ P
Sbjct: 489 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548
Query: 260 KVTFETLYRG 269
VT+ TL G
Sbjct: 549 CVTYNTLING 558
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 130/266 (48%), Gaps = 11/266 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y+S+I CK +D A L M++ GV PN TYN +++G C +S P E
Sbjct: 231 LPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC--SSGQPKE- 287
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +M G+EPDV +++ ++ + + + + M ++G+ P +
Sbjct: 288 -------AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++++ + G + + LL MVRNG+ P+ ++ Y + + AM ++ +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L P+ TY +IG+ R++ + + L Y LIH LC K
Sbjct: 401 RQQGL-NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
W +A + +EM+++G+ + F ++
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSI 485
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 139/298 (46%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +Y SLI+ C ++ D A+ + EM++RG+ + + +N +++ C+
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK---------- 491
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +EK+FD M G++PD+ ++S ++ Y A K + L M G+ P T
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R+EDA L EM +GVSP TYN + + A +LY +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + + TYNI++ N D ++ ++ ++L L+ ++ ++I L + +
Sbjct: 612 ESGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
EA F + GL+P T+ + LI+ +L L ++E T S N
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 19/297 (6%)
Query: 7 YTSLIYGWCKINRI-DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+T L+ G C R D + L M + G PNV +YN+LL G+C E
Sbjct: 129 FTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCD----------ENRS 178
Query: 66 RNAEKVFDEMRVRGIE--PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+ A ++ M G + PDV S++ V++ + + + + M ++GI P V TY+
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
S++ LC ++ A E+L MV+NGV P+ TYN Y A+ ++M D
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
+ P++ TYN L+ R R++++ + L ++ +Y L+ G K E
Sbjct: 299 GV-EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357
Query: 244 ACQYFVEMIEKGLLPQKVTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFGS 295
M+ G+ P F L +G + ML + ++ L+ +++T+G+
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 6/215 (2%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
+A VFDE+ RG + + L +R H P ++ + N M G + P + TY
Sbjct: 37 DARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C GR++ LG +++ G A + K K + AM + +
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCEKQKW 241
C+PN+ +YNIL+ NR E+ + G + D+ SYT +I+G ++
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+A + EM+++G+LP VT+ ++ L ++ +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 27/281 (9%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V PN+ TY +L+ C L + + N K +G D +F+ +L
Sbjct: 87 VTPNLCTYGILIGSCCCAGRL---DLGFAALGNVIK-------KGFRVDAIAFTPLLKGL 136
Query: 95 SRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG--VS 151
+ ++D L M + G P V +Y ++K LC R ++A ELL M +G
Sbjct: 137 CADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP 196
Query: 152 PSAETY----NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
P +Y N FFKE D + A Y +M + + +PN+ TY+ +I MD
Sbjct: 197 PDVVSYTTVINGFFKE----GDLDKAYGTYHEMLDRGI-LPNVVTYSSIIAALCKAQAMD 251
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
E+ + + + + +Y ++HG C + KEA + +M G+ P VT+ +L
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311
Query: 268 RGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNYHFK 303
L ++ R++ K+ L E T+G+ Q Y K
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--DDLCVPNIHTY 193
EDA + E++R G S NC + R A+ Y +M D PN+ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADV-ARHSPAAAVSRYNRMARAGADEVTPNLCTY 94
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV-EMI 252
ILIG R+D+ +V +D ++T L+ GLC ++ +A + M
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154
Query: 253 EKGLLPQKVTFETLYRGL 270
+ G +P ++ L +GL
Sbjct: 155 QLGCIPNVFSYNILLKGL 172
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 143/306 (46%), Gaps = 26/306 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + L++ CK ++I+ A+ GE+ +RG+ P VV++N L+NG C+ +L R
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL 282
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E + +A K+F EM RG+ P+ +F+ +++ +
Sbjct: 283 KRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ L ++ M KG+ P V TY +++ LC G + +A++L+ EM + G+ P T
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y D A+++ ++M ++ + + N+ + LI F ++ +
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNV-AFTALISGFCREGQVIEAERTLREM 461
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + D +YTM+IHG C+K K + EM G +P VT+ L GL + +
Sbjct: 462 LEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQM 521
Query: 277 RTWRRL 282
+ L
Sbjct: 522 KNANML 527
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 124/269 (46%), Gaps = 46/269 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +T+LI G C R D+ +M+ +GV+P+V+TYN L+NG+C+ L
Sbjct: 327 VPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDL----- 381
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
R A+K+ EM RG++PD ++++++ + + +L+ M ++GI
Sbjct: 382 -----REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNV 436
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+T+++ C G++ +AE L EM+ G+ P TY + + D KL ++M
Sbjct: 437 AFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM 496
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ D VP + TYN+ L++GLC++ +
Sbjct: 497 QCDGH-VPGVVTYNV-----------------------------------LLNGLCKQGQ 520
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG 269
K A M+ G++P +T+ L G
Sbjct: 521 MKNANMLLDAMLNLGVVPDDITYNILLEG 549
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 11/276 (3%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75
K+N A F E+++ G P+V +NVL++ +C+ E I A+ +F E+
Sbjct: 202 KLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCK----------EHKINEAQLLFGEI 251
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
RG+ P V SF+ +++ Y ++ FM E + P V TY+ ++ LC G++
Sbjct: 252 GKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQL 311
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
+DA +L EM G+ P+ T+ + A+ M++Y+QM + P++ TYN
Sbjct: 312 DDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGV-KPDVITYNT 370
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
LI + + +++ + L D +YTMLI G C++ + A + EM+++G
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ V F L G + + R +++ E I
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 29/222 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
P+V Y +LI G CK+ + A++ + EM +RG++P+ TY +L++G C+ L
Sbjct: 363 PDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEI 422
Query: 58 ------------NERF---------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
N F E + AE+ EM GI+PD ++++V+H + +
Sbjct: 423 RKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCK 482
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ L M+ G P V TY ++ LC G++++A LL M+ GV P T
Sbjct: 483 KGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDIT 542
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
YN + + +G + + +++ + V + +Y LIG
Sbjct: 543 YNILLEGHC----KHGNREDFDKLQSEKGLVQDYGSYTSLIG 580
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 149/335 (44%), Gaps = 54/335 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +LI CK N I+ A ++ +G+ P+V T+N L+ G+C L N+
Sbjct: 331 PNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLC----LSKNQDI 386
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH--VYSRAHKPQLSLDKLNFMKEKGICPTV 119
A ++F+EM+ +G +PD ++SI++ Y R K L L L M+ G
Sbjct: 387 ------AMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALML--LKEMESSGCARNA 438
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++ LC RIEDAEE+ +M GVS S+ TYN K A +L Q
Sbjct: 439 VVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQ 498
Query: 180 M--------------------------KEDDL--------CVPNIHTYNILIGMFMALNR 205
M K D+ C P+I TY LIG R
Sbjct: 499 MIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGR 558
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+D+ ++ V+ + L +Y +I L +++ KE + F EM+EK P +T +
Sbjct: 559 VDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKI 618
Query: 266 LYRGL------IQSDMLRTWRRLKKKLDEESITFG 294
++RGL IQ + T L+K + E +FG
Sbjct: 619 VFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFG 653
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 135/273 (49%), Gaps = 13/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+L+ G+ + ++ A + +M+ G V+ VL+NG C+ R
Sbjct: 191 PDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEG------RV 244
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ +R +V +E G PD +F+ +++ + R +LD ++FM EKG P V T
Sbjct: 245 EEALRFVLEVSEE----GFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYT 300
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ +C G E A E+L +M+ SP+ TYN + A L R +
Sbjct: 301 YNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILV 360
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L +P++ T+N LI G+ ++ N+ D+ E++ +K D +Y++LI LC +++
Sbjct: 361 SKGL-LPDVCTFNTLIQGLCLSKNQ-DIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERR 418
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
KEA EM G V + TL GL +S
Sbjct: 419 LKEALMLLKEMESSGCARNAVVYNTLIDGLCKS 451
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y + + N++ + E +M+ G+ +V T+NVL+ +C+ L P
Sbjct: 121 PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRP---- 176
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +EM G++PD +F+ ++ + +L M G T +
Sbjct: 177 ------AILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVS 230
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+V C GR+E+A + E+ G SP T+N + + N A+ + M
Sbjct: 231 VKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMI 290
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E P+++TYN LI L + EI + E + +Y LI LC++ +
Sbjct: 291 EKGF-DPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEI 349
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ A ++ KGLLP TF TL +GL S
Sbjct: 350 EAATDLARILVSKGLLPDVCTFNTLIQGLCLS 381
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 17/284 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V + LI CK +++ A L EM G++P+ +T+ L+ G L+
Sbjct: 157 DVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLN------ 210
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A K+ +M G S ++++ + + + + +L + + E+G P T+
Sbjct: 211 ----GALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTF 266
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S+V C G + DA +++ M+ G P TYN + A+++ +QM
Sbjct: 267 NSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMIL 326
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ C PN TYN LI N ++ ++ + L D+ ++ LI GLC +
Sbjct: 327 RE-CSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 385
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A + F EM KG P + T+ L D L RRLK+ L
Sbjct: 386 IAMEMFEEMKNKGCKPDEFTYSILI------DSLCYERRLKEAL 423
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 13/262 (4%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
+L+ + + D L ++ G PN T+ L+ + H E K + N
Sbjct: 60 TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSF---TNFHEIENLLKILENE 116
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
G +PD ++I L+ +K +L + M +GI V+T+ ++K
Sbjct: 117 ---------LGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKA 167
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC ++ A +L EM +G+ P T+ + + D NGA+K+ +QM +
Sbjct: 168 LCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLT 227
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
N+ + +L+ F R++ V D ++ L++G C +A
Sbjct: 228 NV-SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIV 286
Query: 249 VEMIEKGLLPQKVTFETLYRGL 270
MIEKG P T+ +L G+
Sbjct: 287 DFMIEKGFDPDVYTYNSLISGM 308
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV-PNIHTYNILIGM 199
LL ++ +G P+A T+ + + + +K+ E++L P+ + YNI +
Sbjct: 77 LLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKIL----ENELGFKPDTNFYNIALNA 132
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ N++ +V + + + + LD+ ++ +LI LC+ + + A EM GL P
Sbjct: 133 LVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPD 192
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKL 286
++TF TL +G I+ L ++KK++
Sbjct: 193 EITFTTLMQGFIEEGDLNGALKMKKQM 219
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 26/156 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y SL+ +C++ I+ A + M G EP++ TY L+ G+CR + +
Sbjct: 506 PDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKL 565
Query: 62 EKTI-------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+++ + ++F EM + PD + IV
Sbjct: 566 LRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCN 625
Query: 97 AHKP-QLSLDKLNFMKEKGICPTVATYTSVVKCLCS 131
P Q ++D M EKGI P ++ + + LCS
Sbjct: 626 GGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCS 661
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 135/274 (49%), Gaps = 11/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +T L+ CK A L M ++G+ PN+ TYN L+ G+ R L
Sbjct: 362 VPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLD---- 417
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A ++FD M G++P ++ + + Y ++ +L+ MK KGI P +
Sbjct: 418 ------DALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 471
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ + L GR +A+++ + G+ P + TYN K Y + + A+KL +M
Sbjct: 472 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 531
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + C P++ N LI +R+D +++ +K +L + +Y L+ GL + K
Sbjct: 532 VE-NCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 590
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+EA + F M++KG P +TF TL+ L ++D
Sbjct: 591 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 624
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 146/324 (45%), Gaps = 31/324 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
PNV +T I + +I+ A L M + G P+VVTY VL++ +C L
Sbjct: 258 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 317
Query: 57 ----------PN--------ERFE--KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P+ +RF + + + + + EM G PDV +F+I++ +
Sbjct: 318 FAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCK 377
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + KL+ M+++GI P + TY +++ L R++DA E+ M GV P+A T
Sbjct: 378 AGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYT 437
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y F Y D+ A++ + +MK + PNI N + R ++I+ +
Sbjct: 438 YIVFIDYYGKSGDSVSALETFEKMKTKGI-APNIVACNASLYSLAKAGRDREAKQIFYGL 496
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K L D +Y M++ + + EA + EM+E P + +L L ++D +
Sbjct: 497 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRV 556
Query: 277 -RTWR---RLKK-KLDEESITFGS 295
W+ R+K+ KL +T+ +
Sbjct: 557 DEAWKMFMRMKEMKLKPTVVTYNT 580
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 128/278 (46%), Gaps = 13/278 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-SLHPNE 59
+PN+ Y +LI G +++R+D A M GV+P TY V ++ + S+ E
Sbjct: 397 LPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 456
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
FEK M+ +GI P++ + + L+ ++A + + + +K+ G+ P
Sbjct: 457 TFEK-----------MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 505
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY ++KC G I++A +LL EMV N P N + A K++ +
Sbjct: 506 VTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMR 565
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
MKE L P + TYN L+ ++ E++ + + ++ L LC+
Sbjct: 566 MKEMKL-KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 624
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+ A + +M++ G +P T+ T+ GL+++ ++
Sbjct: 625 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVK 662
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 32/295 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------ 54
+P+V Y L+ + K +ID EM EPN +T+N++++G+ + +
Sbjct: 819 IPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALD 878
Query: 55 ----LHPNERFEKT----------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
L + F T + A+++F+ M G P+ ++I+++ +
Sbjct: 879 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGF 938
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+A + + M ++G+ P + TY+ +V CLC GR+++ E+ +G++P
Sbjct: 939 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDV 998
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE--- 211
YN A+ L+ +MK+ P+++TYN LI + L MV E
Sbjct: 999 VCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLI---LNLGIAGMVEEAGK 1055
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
I+N ++ + L ++ ++ LI G K + A + M+ G P T+E L
Sbjct: 1056 IYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 48/341 (14%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y LI+ K A MI G P++ TY+ L+ G+ +R
Sbjct: 189 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKR---------- 238
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ I + + EM G++P+V +F+I + V RA K + + L M ++G P V TY
Sbjct: 239 RDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 298
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++ LC+ +++ A+E+ +M P TY + +D + + + +M++
Sbjct: 299 TVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEK 358
Query: 183 DD--------------LC--------------------VPNIHTYNILIGMFMALNRMDM 208
D LC +PN+HTYN LI + ++R+D
Sbjct: 359 DGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 418
Query: 209 VREIWNHVKGSELGLDLDSYT--MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
EI+++++ LG+ +YT + I + A + F +M KG+ P V
Sbjct: 419 ALEIFDNME--SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 476
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPYRR 307
L ++ R +++ L + + S N K Y +
Sbjct: 477 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 517
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 12/240 (5%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
+ GV+P + TYN+L+ G+ I A+ VF +++ G PDV +++ +L
Sbjct: 780 DLGVQPKLPTYNLLIGGLLE----------ADMIEIAQDVFLQVKNTGCIPDVATYNFLL 829
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN-GV 150
Y ++ K + M P T+ V+ L G ++DA +L +++ +
Sbjct: 830 DAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 889
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
SP+A TY A +L+ M D C PN YNILI F D
Sbjct: 890 SPTACTYGPLIDGLSKSGRLYEAKQLFEGM-SDYGCRPNCAIYNILINGFGKAGEADAAC 948
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ + + DL +Y++L+ LC + E YF E+ E GL P V + + GL
Sbjct: 949 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGL 1008
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 129/320 (40%), Gaps = 31/320 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+P+V Y ++I+G K ++ A F +M ++ V P+ VT LL GV + +
Sbjct: 642 VPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKAGLIEDAYK 700
Query: 56 -----------HPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
P F E I NA + + GI D S + + Y
Sbjct: 701 IIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 760
Query: 95 SRAHKPQLSLDKL--NFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
S H L F K+ G+ P + TY ++ L IE A+++ ++ G P
Sbjct: 761 SFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIP 820
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVRE 211
TYN Y + ++Y++M + C PN T+NI+I G+ A N D +
Sbjct: 821 DVATYNFLLDAYGKSGKIDELFEIYKEMSAHE-CEPNTITHNIVISGLVKAGNVDDALDL 879
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
++ + + +Y LI GL + + EA Q F M + G P + L G
Sbjct: 880 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFG 939
Query: 272 QSDMLRTWRRLKKKLDEESI 291
++ L K++ +E +
Sbjct: 940 KAGEADAACALFKRMVKEGV 959
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+R A +MR G + S++ ++H+ ++ +++ M G P++ TY+S
Sbjct: 171 LRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSS 230
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ L IE LL EM G+ P+ T+ + N A ++ ++M +D+
Sbjct: 231 LMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM-DDE 289
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
C P++ TY +LI ++D +E++ +K D +Y L+ + +
Sbjct: 290 GCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSV 349
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
Q++ EM + G +P VTF L L ++
Sbjct: 350 NQFWSEMEKDGHVPDVVTFTILVDALCKA 378
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 36/195 (18%)
Query: 107 LNFMKEKGICPTVATYTSVVKCLCSCGRIE------------------------------ 136
+ M+++ I TY ++ KCL G +
Sbjct: 143 FDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLK 202
Query: 137 -----DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIH 191
+A E+ M+ +G PS +TY+ R+D M L ++M+ L PN++
Sbjct: 203 SRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGL-KPNVY 261
Query: 192 TYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251
T+ I I + +++ EI + G D+ +YT+LI LC +K A + F +M
Sbjct: 262 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKM 321
Query: 252 IEKGLLPQKVTFETL 266
P +VT+ TL
Sbjct: 322 KTGRHKPDRVTYITL 336
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y L++G CK+ R A R L EM E+G PN+VTY+ LL+ CR N +
Sbjct: 349 PDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCR------NGMW 402
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A + D+M +G + ++ +++ + K ++ + MK +G P + T
Sbjct: 403 D----DARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICT 458
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC+ ++++AE + G ++ GV + TYN ++L +M
Sbjct: 459 YNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMV 518
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C ++ +YN LI +D + + + + SY MLI+ LC+ K
Sbjct: 519 LHG-CPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKV 577
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++A + EM+ +GL P VT+ TL GL + L +KL E++
Sbjct: 578 RDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENV 627
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 150/325 (46%), Gaps = 32/325 (9%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF- 61
+V + ++ G C + + A R + M+ G P+VVTY LL G+CR + +E +
Sbjct: 249 DVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCR--TRQADEAYA 306
Query: 62 ----------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK 99
E + A ++++ M +G PDV +++I++H + +
Sbjct: 307 MLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGR 366
Query: 100 PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC 159
++ L+ M+EKG P + TY++++ C G +DA +L +M G S +++ YN
Sbjct: 367 CGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNG 426
Query: 160 FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
+ AM+L ++MK C P+I TYN +I ++MD I+ ++
Sbjct: 427 IIYALGKDGKLDEAMRLVQEMKSQG-CKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEE 485
Query: 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI-QSDMLRT 278
+ + +Y LIH L +W+E + EM+ G V++ L + L + ++ R+
Sbjct: 486 GVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRS 545
Query: 279 WRRLKKKLDEESITFGSEFQNYHFK 303
L EE +T G + N+ +
Sbjct: 546 MMLL-----EEMMTKGIKPNNFSYN 565
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++IY C +++D AE G ++E GV N +TYN L++ A LH + R+
Sbjct: 454 PDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIH-----ALLH-SGRW 507
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ +R A +EM + G DV S++ ++ + S+ L M KGI P +
Sbjct: 508 QEGLRLA----NEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFS 563
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G++ DA EL EM+ G++P TYN + A+ L ++
Sbjct: 564 YNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLP 623
Query: 182 EDDLCVPNIHTYNILI 197
+++ P+I TYNILI
Sbjct: 624 NENV-HPDIVTYNILI 638
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 120/301 (39%), Gaps = 19/301 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + Y +++ + + A M+ V P T+ V +CR
Sbjct: 143 PSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGR------- 195
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R+A + M G PD + V+H + L+ M G V T
Sbjct: 196 ---ARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNT 252
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ VV LC G + +A L+ M+ +G +PS TY + + A+ A + ++
Sbjct: 253 FNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVP 312
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E N+ N +I +A ++ E++ + D+ +Y +L+HGLC+ +
Sbjct: 313 E-----VNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRC 367
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI-TFGSEFQNY 300
A + EM EKG P VT+ TL ++ M W + LD+ S F Q Y
Sbjct: 368 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGM---WDDARAMLDQMSAKGFSMNSQGY 424
Query: 301 H 301
+
Sbjct: 425 N 425
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 10/162 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y LI CK +D + L EM+ +G++PN +YN+L+N +C+
Sbjct: 525 DVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGK-------- 576
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+R+A ++ EM +G+ PD+ +++ +++ + +L+ L + + + P + TY
Sbjct: 577 --VRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTY 634
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
++ C ++DA LL + V G+ P+ T+ + +
Sbjct: 635 NILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNF 676
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 156/358 (43%), Gaps = 67/358 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YTSLI G C +RI A R M + G PNVVTY L+ G+CR +++ +
Sbjct: 158 IPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALK 217
Query: 61 FEKTIRN-------------------------------AEKVFDEMRVRGIEPDVTSFSI 89
+ + N A+++F+EM +G+ PDV +FS
Sbjct: 218 LHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSA 277
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ + + L M +GI P + T+TS+++ C G ++ A+EL M G
Sbjct: 278 LIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKG 337
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDM 208
P +Y Y + AMKLY +M P++ T+ +L+ G+F+A D
Sbjct: 338 YEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKW-PDMKTFCVLLKGLFLAGKVGDA 396
Query: 209 VR----------------------------------EIWNHVKGSELGLDLDSYTMLIHG 234
+ E++N +K + LD++S+ LI G
Sbjct: 397 KKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDG 456
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
LC+ +K + A + F ++ ++GL P VT+ + G ++ + L + ++E T
Sbjct: 457 LCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCT 514
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 128/287 (44%), Gaps = 17/287 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN LI C +NR+ + ++ RG P+VVTY L+ G+C
Sbjct: 124 PNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLC----------M 173
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL----DKLNFMKEKGI-C 116
E I A ++F M+ G P+V ++ ++ R L+L + LN I C
Sbjct: 174 EHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINC 233
Query: 117 -PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
P + +Y ++ LC G+ ++A+ L EMV GV P T++ A K
Sbjct: 234 KPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKK 293
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
M + VP++ T+ LI F + +D +E++ + D+ SYT+LI+G
Sbjct: 294 FLETMMLRGI-VPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGY 352
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
C+ +EA + + EM+ G P TF L +GL + + ++L
Sbjct: 353 CKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKL 399
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 117/238 (49%), Gaps = 15/238 (6%)
Query: 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+++++N+LL + + H ++ F ++ +M + G+ P+ + +I+++
Sbjct: 90 SIISFNLLLGALAKIK--HYSQVFS--------LYKKMHLAGLSPNFFTLNILINCLCNV 139
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
++ + L + + +G P V TYTS++K LC RI +A L M + G P+ TY
Sbjct: 140 NRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTY 199
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDL-----CVPNIHTYNILIGMFMALNRMDMVREI 212
K + N A+KL+++M C PNI +YNI+I + + + +
Sbjct: 200 GTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRL 259
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+N + + D+ +++ LI LC++ EA ++ M+ +G++P TF +L G
Sbjct: 260 FNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGF 317
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 126/278 (45%), Gaps = 46/278 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ +TSLI G+C + +D A+ M +G EP+V++Y VL+ G C+ +
Sbjct: 304 VPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFN------ 357
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK----------------PQ--- 101
+ A K+++EM G PD+ +F ++L A K P+
Sbjct: 358 ----VEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLY 413
Query: 102 ---LSLDKL-------------NFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
+ LD L N +K + + ++ ++ LC ++E A EL ++
Sbjct: 414 ICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKL 473
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+ G+ P TY + + A L+ QM E++ C PN+ TY+ L+ F N+
Sbjct: 474 SQEGLQPDVVTYCIMINGFCKNGQVDNANILF-QMMEENGCTPNLLTYSALLHGFYKNNK 532
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
++ V ++ + + ++ L YT++ + + +K +E
Sbjct: 533 LEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCRE 570
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
DL + +I ++N+L+G + V ++ + + L + + +LI+ LC + +E
Sbjct: 85 DLMMRSIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVRE 144
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKK 284
++ +G +P VT+ +L +GL S+ R + R++K
Sbjct: 145 GLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQK 189
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SLI G K R+D A FL EM+E G++PN TY ++G +
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA----- 539
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A+K EMR G+ P+ + +++ Y + K + M ++GI T
Sbjct: 540 -----SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ L +++DAEE+ EM G++P +Y + + A ++ +M
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ L PN+ YN+L+G F ++ +E+ + + L + +Y +I G C+
Sbjct: 655 EEGL-TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA + F EM KGL+P + TL G
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 140/325 (43%), Gaps = 47/325 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + Y SLI G+C+ + L EM +R + + TY ++ G+C L
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD---- 434
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + EM G P+V ++ ++ + + + ++ L MKE+GI P +
Sbjct: 435 ------GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y S++ L R+++A L EMV NG+ P+A TY F Y + A K ++M
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 181 KE----------------------------------DDLCVPNIHTYNILIGMFMALNRM 206
+E D + + TY +L+ +++
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D EI+ ++G + D+ SY +LI+G + ++A F EM+E+GL P + + L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESI 291
G +S + + L LDE S+
Sbjct: 669 LGGFCRSGEIEKAKEL---LDEMSV 690
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 138/306 (45%), Gaps = 47/306 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN + T LI +CK ++ A M+++G+ + TY VL+NG L N++
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG------LFKNDK 607
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +AE++F EMR +GI PDV S+ ++++ +S+ Q + + M E+G+ P V
Sbjct: 608 ----VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ C G IE A+ELL EM G+ P+A TY Y D A +L+ +M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 181 KEDDL---------------------------------CVPNIHTYNILIGMFMALNRMD 207
K L C + +N LI + +
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 208 MVREIWNHV-KGS--ELGLDLD-SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
+ E+ N + GS G D +Y ++I LC++ + A + F +M L+P +T+
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 264 ETLYRG 269
+L G
Sbjct: 844 TSLLNG 849
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 14/277 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI G+ K+ + A EM+E G+ PNV+ YN+LL G CR
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE------- 677
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A+++ DEM V+G+ P+ ++ ++ Y ++ + + MK KG+ P
Sbjct: 678 ---IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK-EYRGRKDANGAMKLYRQM 180
YT++V C +E A + G + G + S +N ++ K L R M
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 181 KE--DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
D PN TYNI+I ++ +E+++ ++ + L + +YT L++G +
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ E F E I G+ P + + + ++ M
Sbjct: 854 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 130/291 (44%), Gaps = 30/291 (10%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF----- 61
Y LI G CKI R++ A+ L EM GV + TY++L++G+ + + +
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 62 --------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
E + A+ +FD M G+ P +++ ++ Y R +
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
+ L MK++ I + TY +VVK +CS G ++ A ++ EM+ +G P+ Y
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
K + AM++ ++MKE + P+I YN LI RMD R + + L
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGI-APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ +Y I G E ++ A +Y EM E G+LP KV L GLI
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV----LCTGLIN 565
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +YT+LI + + +R A R L EM E+G+ P++ YN L+ G+ +
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK---------- 499
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A EM G++P+ ++ + Y A + + + M+E G+ P
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T ++ C G++ +A MV G+ A+TY + A +++R+M+
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P++ +Y +LI F L M I++ + L ++ Y ML+ G C +
Sbjct: 620 GKGI-APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++A + EM KGL P VT+ T+ G +S L RL
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 120/294 (40%), Gaps = 26/294 (8%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----------------PNERFEK 63
+D A + MI +G+ P TY+VL++G+C+ L N +
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 64 TI------RNAEK---VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG 114
I RNA+ + EM GI + + V S+ + + + M G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
+ P Y S+++ C + ELL EM + + S TY K D +GA
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
+ ++M C PN+ Y LI F+ +R + +K + D+ Y LI G
Sbjct: 438 NIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
L + ++ EA + VEM+E GL P T+ G I++ + + K++ E
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 116/277 (41%), Gaps = 33/277 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + L+ + NR+D+ M+ER V +V TY++L+ CR ++
Sbjct: 183 VPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLG-- 240
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE----KGIC 116
+ + EK F L++D +KE KG+
Sbjct: 241 -KDVLFKTEKEF-------------------------RTATLNVDGALKLKESMICKGLV 274
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P TY ++ LC R+EDA+ LL EM GVS TY+ ++A+ A L
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+M + + + Y+ I + M+ + +++ + S L +Y LI G C
Sbjct: 335 VHEMVSHGINIKP-YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ ++ + VEM ++ ++ T+ T+ +G+ S
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 101/247 (40%), Gaps = 32/247 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PN Y ++I G+CK + A R EM +G+ P+ Y L++G CR
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 52 --------RASLHPNE-------RFEKTIRNAE---KVFDEMRVRGIEPDVTSFSIVLHV 93
+S P +F KT E ++ D R +P+ +++I++
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ + + + + M+ + PTV TYTS++ GR + + E + G+ P
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Query: 154 AETY----NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
Y N F KE K +++ + DD C +I T L+ F + M++
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Query: 210 REIWNHV 216
++ ++
Sbjct: 935 EKVMENM 941
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERF--LGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
MP V YTSL+ G+ K+ R AE F E I G+EP+ + Y+V++N +
Sbjct: 837 MPTVITYTSLLNGYDKMGR--RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK------- 887
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI-----VLHVYSRAHKPQLSLDKLNFMKEK 113
E A + D+M + D SI +L +++ + +++ + M
Sbjct: 888 ---EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRL 944
Query: 114 GICPTVATYTSVV--KCLCSCGRIE 136
P AT ++ C+ S R+E
Sbjct: 945 QYIPDSATVIELINESCISSNQRVE 969
>gi|357113487|ref|XP_003558534.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Brachypodium distachyon]
Length = 520
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 139/292 (47%), Gaps = 18/292 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + + L+ GW + AE F EM E G++P++VTYN L++ C+
Sbjct: 215 NRQTFNILLSGW---KTSEDAEAFFAEMRELGIDPDLVTYNSLIDCQCK----------N 261
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ + A K+ DEMR + I PDV +++ ++ +P + L M E G P V Y
Sbjct: 262 RDVEKAYKLLDEMREKEISPDVITYTSLIGGLGLIGQPDKARHLLKEMCELGCHPDVPAY 321
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ ++ R+ DA L+ EM G+ P+A TYN FF+ Y D A LY +M+
Sbjct: 322 NATIRNFVIAKRLGDAFALMDEMASKGLMPNATTYNLFFRFYYWAYDIGSAWLLYERMRS 381
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ C PN + ++ + ++ E+W+ + G+ G +L LC++ K +
Sbjct: 382 ER-CFPNTQSCMFIVRLCHRHGKVMQALELWSDMVGNGFGSFTLVSDVLFDLLCDEGKLE 440
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
EA + F +M+E G P V F + + L+Q L KL+E+ FG
Sbjct: 441 EAERCFHQMVELGQKPSSVAFRRI-KILMQ---LANREESISKLNEKMARFG 488
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SLI G K R+D A FL EM+E G++PN TY ++G +
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA----- 539
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A+K EMR G+ P+ + +++ Y + K + M ++GI T
Sbjct: 540 -----SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ L +++DAEE+ EM G++P +Y + + A ++ +M
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ L PN+ YN+L+G F ++ +E+ + + L + +Y +I G C+
Sbjct: 655 EEGL-TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA + F EM KGL+P + TL G
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 140/325 (43%), Gaps = 47/325 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + Y SLI G+C+ + L EM +R + + TY ++ G+C L
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD---- 434
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + EM G P+V ++ ++ + + + ++ L MKE+GI P +
Sbjct: 435 ------GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y S++ L R+++A L EMV NG+ P+A TY F Y + A K ++M
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 181 KE----------------------------------DDLCVPNIHTYNILIGMFMALNRM 206
+E D + + TY +L+ +++
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D EI+ ++G + D+ SY +LI+G + ++A F EM+E+GL P + + L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESI 291
G +S + + L LDE S+
Sbjct: 669 LGGFCRSGEIEKAKEL---LDEMSV 690
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 138/306 (45%), Gaps = 47/306 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN + T LI +CK ++ A M+++G+ + TY VL+NG L N++
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG------LFKNDK 607
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +AE++F EMR +GI PDV S+ ++++ +S+ Q + + M E+G+ P V
Sbjct: 608 ----VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ C G IE A+ELL EM G+ P+A TY Y D A +L+ +M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 181 KEDDL---------------------------------CVPNIHTYNILIGMFMALNRMD 207
K L C + +N LI + +
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 208 MVREIWNHV-KGS--ELGLDLD-SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
+ E+ N + GS G D +Y ++I LC++ + A + F +M L+P +T+
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 264 ETLYRG 269
+L G
Sbjct: 844 TSLLNG 849
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 14/277 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y LI G+ K+ + A EM+E G+ PNV+ YN+LL G CR
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE------- 677
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A+++ DEM V+G+ P+ ++ ++ Y ++ + + MK KG+ P
Sbjct: 678 ---IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK-EYRGRKDANGAMKLYRQM 180
YT++V C +E A + G + G + S +N ++ K L R M
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 181 KE--DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
D PN TYNI+I ++ +E+++ ++ + L + +YT L++G +
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ E F E I G+ P + + + ++ M
Sbjct: 854 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 130/291 (44%), Gaps = 30/291 (10%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF----- 61
Y LI G CKI R++ A+ L EM GV + TY++L++G+ + + +
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 62 --------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
E + A+ +FD M G+ P +++ ++ Y R +
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
+ L MK++ I + TY +VVK +CS G ++ A ++ EM+ +G P+ Y
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
K + AM++ ++MKE + P+I YN LI RMD R + + L
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGI-APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ +Y I G E ++ A +Y EM E G+LP KV L GLI
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV----LCTGLIN 565
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +YT+LI + + +R A R L EM E+G+ P++ YN L+ G+ +
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK---------- 499
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A EM G++P+ ++ + Y A + + + M+E G+ P
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T ++ C G++ +A MV G+ A+TY + A +++R+M+
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P++ +Y +LI F L M I++ + L ++ Y ML+ G C +
Sbjct: 620 GKGI-APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++A + EM KGL P VT+ T+ G +S L RL
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 120/294 (40%), Gaps = 26/294 (8%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----------------PNERFEK 63
+D A + MI +G+ P TY+VL++G+C+ L N +
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 64 TI------RNAEK---VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG 114
I RNA+ + EM GI + + V S+ + + + M G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
+ P Y S+++ C + ELL EM + + S TY K D +GA
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
+ ++M C PN+ Y LI F+ +R + +K + D+ Y LI G
Sbjct: 438 NIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
L + ++ EA + VEM+E GL P T+ G I++ + + K++ E
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 116/277 (41%), Gaps = 33/277 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + L+ + NR+D+ M+ER V +V TY++L+ CR ++
Sbjct: 183 VPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLG-- 240
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE----KGIC 116
+ + EK F L++D +KE KG+
Sbjct: 241 -KDVLFKTEKEF-------------------------RTATLNVDGALKLKESMICKGLV 274
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P TY ++ LC R+EDA+ LL EM GVS TY+ ++A+ A L
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+M + + + Y+ I + M+ + +++ + S L +Y LI G C
Sbjct: 335 VHEMVSHGINIKP-YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ ++ + VEM ++ ++ T+ T+ +G+ S
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 101/247 (40%), Gaps = 32/247 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PN Y ++I G+CK + A R EM +G+ P+ Y L++G CR
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 52 --------RASLHPNE-------RFEKTIRNAE---KVFDEMRVRGIEPDVTSFSIVLHV 93
+S P +F KT E ++ D R +P+ +++I++
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ + + + + M+ + PTV TYTS++ GR + + E + G+ P
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Query: 154 AETY----NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
Y N F KE K +++ + DD C +I T L+ F + M++
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Query: 210 REIWNHV 216
++ ++
Sbjct: 935 EKVMENM 941
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERF--LGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
MP V YTSL+ G+ K+ R AE F E I G+EP+ + Y+V++N +
Sbjct: 837 MPTVITYTSLLNGYDKMGR--RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK------- 887
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI-----VLHVYSRAHKPQLSLDKLNFMKEK 113
E A + D+M + D SI +L +++ + +++ + M
Sbjct: 888 ---EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRL 944
Query: 114 GICPTVATYTSVV--KCLCSCGRIE 136
P AT ++ C+ S R+E
Sbjct: 945 QYIPDSATVIELINESCISSNQRVE 969
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 133/290 (45%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +LI G CK + A + EM +G EPNV+TY +L++ C+
Sbjct: 387 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK---------- 436
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A V DEM +G+ + ++ ++ + K Q +L+ M KG P + T
Sbjct: 437 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 496
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++ LC + E+A L +M+ GV + TYN + R A+KL M
Sbjct: 497 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 556
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +I TYN LI ++ ++ + L + S +LI+GLC
Sbjct: 557 FRGCPLDDI-TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 615
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ A ++ +MI +GL P VT+ +L GL ++ + L KL E I
Sbjct: 616 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 665
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +Y +LI+ K+ R++ + L EM+ G P+V T+N ++G+C+ +H
Sbjct: 249 VPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIH---- 304
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+ D M +RG P+ ++ +++H R K +D+ + K P V
Sbjct: 305 ------EAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGK----VDEARMLLNKVPNPNVV 354
Query: 121 TYTSVVKCLCSCGRIEDAEELLGE-MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+ +++ S GR+++A+ ++ E M+ G P TYN + A +L +
Sbjct: 355 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 414
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ C PN+ TY ILI F R++ R + + + G L L+ Y LI LC+ +
Sbjct: 415 MQIKG-CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 473
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
K ++A F +M KG P TF +L GL
Sbjct: 474 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 504
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 11/270 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y LI CK ++ A G+M +G +P++ T+N L+ G+C+ +FE
Sbjct: 458 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV------NKFE 511
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A ++ +M + G+ + +++ ++H + R Q +L +N M +G TY
Sbjct: 512 E----ALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 567
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++K LC G IE L +M+ G++P+ + N + A++ R M
Sbjct: 568 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 627
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L P+I TYN LI R +++ ++ + D +Y LI C++ +
Sbjct: 628 RGL-TPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 686
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+A ++ G +P +VT+ L I+
Sbjct: 687 DAHLLLSRGVDSGFIPNEVTWYILVSNFIK 716
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 26/225 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + SLI+G CK+N+ + A +M+ GV N +TYN L++ RR ++ +
Sbjct: 492 PDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKL 551
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
I +F++M +G+ P+ S +I+++ R
Sbjct: 552 VNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 611
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
Q +L+ L M +G+ P + TY S++ LC GR ++A L ++ G+ P A T
Sbjct: 612 TGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAIT 671
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
YN + ++ L D +PN T+ IL+ F+
Sbjct: 672 YNTLI-SWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFI 715
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 19/263 (7%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
EM+ +G+ P V T+ V++ +C + +A + +M G P+ +
Sbjct: 207 EMLSKGISPTVYTFGVVMKALC----------LVNEVDSACALLKDMTRHGCVPNAIVYQ 256
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
++H + + L L M G P V T+ + LC RI +A +L+ M+
Sbjct: 257 TLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLR 316
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G +P++ TY + A L ++ PN+ +N LI +++ R+D
Sbjct: 317 GFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-----PNVVLFNTLINGYVSRGRLDE 371
Query: 209 VREIWNHVKGS-ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ + + S G D+ +Y LI GLC+K A + EM KG P +T+ L
Sbjct: 372 AKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILI 431
Query: 268 RGLIQSDMLRTWRRLKKKLDEES 290
+ L R + LDE S
Sbjct: 432 DRFCKEGRLEEARNV---LDEMS 451
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 37/233 (15%)
Query: 68 AEKVFDEMR-VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++ +MR V EP S+++VL V + P++ + M KGI PTV T+ V+
Sbjct: 165 ATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVM 224
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
K LC ++ A LL +M R+G C
Sbjct: 225 KALCLVNEVDSACALLKDMTRHG------------------------------------C 248
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VPN Y LI + R++ V ++ + D++++ IHGLC+ + EA +
Sbjct: 249 VPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAK 308
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
M+ +G P T+ L GL + + R L K+ ++ + N
Sbjct: 309 LVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLIN 361
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
+KG C Y ++ L + G + + LL +M + G+ + K Y GR
Sbjct: 104 QKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHY-GRAGLP 162
Query: 172 G-AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
G A +L M+ C P +YN+++ + +A N +V ++ + + + ++ +
Sbjct: 163 GQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGV 222
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++ LC + AC +M G +P + ++TL L +
Sbjct: 223 VMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXK 264
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 144/298 (48%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G+ K +D A EM++RG+ PNVVTY+ ++ +C+
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCK---------- 246
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A +V M G+ P+ +++ ++H Y + +P+ ++ L M G+ P V T
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR +A ++ M + G+ P TY + Y + L M
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN + ++ILI + ++D +++ ++ L D +Y +I LC+ +
Sbjct: 367 RNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
++A +YF +MI++ L P + + +L L D + L ++ + I + F N
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 143/310 (46%), Gaps = 58/310 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN + Y S+++G+C + A FL +M GVEP+VVTYN L++ +C+ N R
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK------NGR 319
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTS---------------------------------- 86
+ A K+FD M RG++P++T+
Sbjct: 320 CTE----ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375
Query: 87 -FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
FSI++ Y++ K ++ + M+++G+ P TY +V+ LC GR+EDA +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 146 VRNGVSPSAETYN------CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
+ +SP YN C F ++ + A +L +M + +C+ I +N +I
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKW------DKAKELILEMLDRGICLDTIF-FNSIIDS 488
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
R+ ++++ + + D+ +Y+ LI G C K EA + M+ G+ P
Sbjct: 489 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548
Query: 260 KVTFETLYRG 269
VT+ TL G
Sbjct: 549 CVTYNTLING 558
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 130/266 (48%), Gaps = 11/266 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y+S+I CK +D A L M++ GV PN TYN +++G C +S P E
Sbjct: 231 LPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC--SSGQPKE- 287
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +M G+EPDV +++ ++ + + + + M ++G+ P +
Sbjct: 288 -------AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++++ + G + + LL MVRNG+ P+ ++ Y + + AM ++ +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L P+ TY +IG+ R++ + + L Y LIH LC K
Sbjct: 401 RQQGLN-PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
W +A + +EM+++G+ + F ++
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSI 485
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 139/298 (46%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +Y SLI+ C ++ D A+ + EM++RG+ + + +N +++ C+
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK---------- 491
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +EK+FD M G++PD+ ++S ++ Y A K + L M G+ P T
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R+EDA L EM +GVSP TYN + + A +LY +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + + TYNI++ N D ++ ++ ++L L+ ++ ++I L + +
Sbjct: 612 ESGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
EA F + GL+P T+ + LI+ +L L ++E T S N
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 19/297 (6%)
Query: 7 YTSLIYGWCKINRI-DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+T L+ G C R D + L M + G PNV +YN+LL G+C E
Sbjct: 129 FTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCD----------ENRS 178
Query: 66 RNAEKVFDEMRVRGIE--PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+ A ++ M G + PDV S++ V++ + + + + M ++GI P V TY+
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
S++ LC ++ A E+L MV+NGV P+ TYN Y A+ ++M D
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
+ P++ TYN L+ R R++++ + L ++ +Y L+ G K E
Sbjct: 299 GV-EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357
Query: 244 ACQYFVEMIEKGLLPQKVTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFGS 295
M+ G+ P F L +G + ML + ++ L+ +++T+G+
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 6/215 (2%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
+A VFDE+ RG + + L +R H P ++ + N M G + P + TY
Sbjct: 37 DARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C GR++ LG +++ G A + K K + AM + +
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCEKQKW 241
C+PN+ +YNIL+ NR E+ + G + D+ SYT +I+G ++
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+A + EM+++G+LP VT+ ++ L ++ +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 27/281 (9%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V PN+ TY +L+ C L + + N K +G D +F+ +L
Sbjct: 87 VTPNLCTYGILIGSCCCAGRL---DLGFAALGNVIK-------KGFRVDAIAFTPLLKGL 136
Query: 95 SRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG--VS 151
+ ++D L M + G P V +Y ++K LC R ++A ELL M +G
Sbjct: 137 CADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP 196
Query: 152 PSAETY----NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
P +Y N FFKE D + A Y +M + + +PN+ TY+ +I MD
Sbjct: 197 PDVVSYTTVINGFFKE----GDLDKAYGTYHEMLDRGI-LPNVVTYSSIIAALCKAQAMD 251
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
E+ + + + + +Y ++HG C + KEA + +M G+ P VT+ +L
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311
Query: 268 RGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNYHFK 303
L ++ R++ K+ L E T+G+ Q Y K
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--DDLCVPNIHTY 193
EDA + E++R G S NC + R A+ Y +M D PN+ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADV-ARHSPAAAVSRYNRMARAGADEVTPNLCTY 94
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV-EMI 252
ILIG R+D+ +V +D ++T L+ GLC ++ +A + M
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154
Query: 253 EKGLLPQKVTFETLYRGL 270
+ G +P ++ L +GL
Sbjct: 155 QLGCIPNVFSYNILLKGL 172
>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 130/261 (49%), Gaps = 14/261 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +K + ++ GWC + A+R ++I ++P++ TY +N + + L
Sbjct: 250 PVIKSWNIILNGWCVKGSLPDAKRIWNQIIASKLKPDLFTYGTFINSLTKAGKLS----- 304
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+F M +GI PDV + ++ K +LD M ++G VAT
Sbjct: 305 -----TAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALDIFREMTDRGCQADVAT 359
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R E ELL +M G SP+ TY+ K KD + L ++M
Sbjct: 360 YNTLIKYFCKIRRTEKVYELLDDMENKGCSPNNMTYSYILKTTEKPKD---VIHLLQRM- 415
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C + TYN+++ +++++ + V+++W+ ++ + G D S+T+++HGL + +
Sbjct: 416 EKSGCRLDSDTYNLILNLYVSMKYENGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGRL 475
Query: 242 KEACQYFVEMIEKGLLPQKVT 262
+A QY+ M +G+ P+ T
Sbjct: 476 DQALQYYTTMKSRGMTPEPRT 496
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 4/208 (1%)
Query: 63 KTIRNAEKVFDEM--RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K ++ ++FDE+ RG+ +F+++L+ Y+ AHK Q +++ K+ G +
Sbjct: 160 KKVKLMTQLFDEIPEERRGLVVTNRTFAVLLNRYAGAHKVQEAIEMFYKRKDYGFEVDLV 219
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ ++ LC +E+AE L + ++ P +++N + + A +++ Q+
Sbjct: 220 GFQILLMSLCRYKHVEEAEALFLQK-KDEFPPVIKSWNIILNGWCVKGSLPDAKRIWNQI 278
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L P++ TY I ++ +++ + + D+ +I LC K+K
Sbjct: 279 IASKL-KPDLFTYGTFINSLTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKK 337
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYR 268
EA F EM ++G T+ TL +
Sbjct: 338 IPEALDIFREMTDRGCQADVATYNTLIK 365
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 140/317 (44%), Gaps = 46/317 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G C++ +D+A R EMI+ G +P+V T+ + G C+ +L
Sbjct: 375 PSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNL------ 428
Query: 62 EKTIRNAEKVFDEMRVRGIEPD-----------------VTSFSIVLHVYSRAHKPQL-- 102
A+++FDEM RG++PD +F + + +R P L
Sbjct: 429 ----PMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLIT 484
Query: 103 ------SLDKLNFMKE----------KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
L KL +KE G+ P TYTS++ G + A L EM+
Sbjct: 485 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEML 544
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G+ PS TY Y R A+ + +M E + PN+ TYN LI + +M
Sbjct: 545 SKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVH-PNVITYNALINGLCKVRKM 603
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D + ++ + + +YT+LI+ C W+EA + + +M+++ + P T +L
Sbjct: 604 DQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSL 663
Query: 267 YRGLIQSDMLRTWRRLK 283
+ L + L R L+
Sbjct: 664 LKHLNKDYKLHVVRHLE 680
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 11/264 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y +++ +CK + A + L +M G PN VTYNVL+NG+ H E
Sbjct: 200 PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLS-----HSGE-- 252
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++ +M G+E V ++ ++ Y + + + M +G PTV T
Sbjct: 253 ---MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVT 309
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GR+ DA +LL MV + P +YN Y + A L+ +++
Sbjct: 310 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 369
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P++ TYN LI L +D+ + + + D+ ++T + G C+
Sbjct: 370 YRSLA-PSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNL 428
Query: 242 KEACQYFVEMIEKGLLPQKVTFET 265
A + F EM+ +GL P + + T
Sbjct: 429 PMAKELFDEMLNRGLQPDRFAYIT 452
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 15/308 (4%)
Query: 1 MPNVKMYTSLI-YGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE 59
MP+VK+ L+ + + K + ++ +M+ +G+ P+V N +L + R
Sbjct: 127 MPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDR------- 179
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ I A +V++ M GI P V +++ +L + + Q +L L M+ G P
Sbjct: 180 --DNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPND 237
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY +V L G +E A+EL+ +M+R G+ S TY+ + Y + A +L +
Sbjct: 238 VTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEE 297
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M VP + TYN ++ R+ R++ + + L DL SY LI+G
Sbjct: 298 MLSRG-AVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLG 356
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
EA F E+ + L P VT+ TL GL + L RLK +E I G +
Sbjct: 357 NIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLK----DEMIKHGPDPDV 412
Query: 300 YHFKPYRR 307
+ F + R
Sbjct: 413 FTFTTFVR 420
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 118/279 (42%), Gaps = 61/279 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPN----------------------- 38
P+V +T+ + G+CK+ + MA+ EM+ RG++P+
Sbjct: 410 PDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGM 469
Query: 39 ------------VVTYNVLLNGVCRRASLHPNERFEKT---------------------- 64
++TYNV ++G+ + +L K
Sbjct: 470 QEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLM 529
Query: 65 ---IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+R A +F EM +GI P V ++++++H Y+ + +L++ M EKG+ P V T
Sbjct: 530 AGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVIT 589
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC +++ A EM G+SP+ TY E A++LY+ M
Sbjct: 590 YNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDML 649
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
+ ++ P+ T+ L+ ++ +VR + N + E
Sbjct: 650 DREI-QPDSCTHRSLLKHLNKDYKLHVVRHLENVIAAGE 687
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 14/261 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++K ++ GWC + + A+RF ++I +P+ TY + +N + + L
Sbjct: 257 PDIKSMNVILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLS----- 311
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+F M +G PDV + ++ + +L+ L M E+ P VAT
Sbjct: 312 -----TAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVAT 366
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++K LC R E ELL +M + G P+A TY K + ++ G + +
Sbjct: 367 YNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEVPGIL----ERM 422
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + C N YN+++ ++M +R + ++ + +G D +YT++IHGL +K +
Sbjct: 423 ERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRM 482
Query: 242 KEACQYFVEMIEKGLLPQKVT 262
+A YF +M G++P+ T
Sbjct: 483 DDALSYFKQMTLMGMVPEPRT 503
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 115/268 (42%), Gaps = 12/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P ++ ++ ++ R + EM +R N T+ VLLN R A+ H E
Sbjct: 153 PGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLN---RYAAAHKTE-- 207
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+F++ + G E D+ +F +L R +++ + L K+ P + +
Sbjct: 208 -----EAVKIFNKRKGLGFELDLIAFQTLLMSLCRYKHVEMA-EFLFHSKKNEFPPDIKS 261
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ C G + +A+ +++ + P TY F + A+KL++ M
Sbjct: 262 MNVILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMW 321
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P++ N +I R+ E+ + + D+ +Y LI LC+ Q++
Sbjct: 322 EKG-CNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRF 380
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ + +M +KG LP T+ L +
Sbjct: 381 EKVYELLDDMEQKGCLPNARTYGYLLKS 408
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 96/240 (40%), Gaps = 12/240 (5%)
Query: 31 IERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIV 90
IE G P +N +L+ + R H ++FDEM R + +F ++
Sbjct: 147 IESGYSPGCGVHNEILDILGRMRRFH----------EMTQLFDEMSKRKGLVNERTFGVL 196
Query: 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
L+ Y+ AHK + ++ N K G + + +++ LC +E AE L +N
Sbjct: 197 LNRYAAAHKTEEAVKIFNKRKGLGFELDLIAFQTLLMSLCRYKHVEMAE-FLFHSKKNEF 255
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
P ++ N + A + + + C P+ TY I I ++
Sbjct: 256 PPDIKSMNVILNGWCVLGSLREAKRFWNDIITSK-CKPDKFTYGIFINSLTKAGKLSTAV 314
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+++ + D+ +I LC K++ EA + EM E+ P T+ +L + L
Sbjct: 315 KLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHL 374
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 6/173 (3%)
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
E G P + ++ L R + +L EM + + T+ Y
Sbjct: 148 ESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTE 207
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR--EIWNHVKGSELGLDLDSYT 229
A+K++ + K + I +L M+L R V E H K +E D+ S
Sbjct: 208 EAVKIFNKRKGLGFELDLIAFQTLL----MSLCRYKHVEMAEFLFHSKKNEFPPDIKSMN 263
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++++G C +EA +++ ++I P K T+ L ++ L T +L
Sbjct: 264 VILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKL 316
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 141/325 (43%), Gaps = 45/325 (13%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLN--------------- 47
+V YTSLI + R A +M E G +P ++TYNV+LN
Sbjct: 216 DVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGL 275
Query: 48 -------GV-------------CRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSF 87
GV CRR SL+ A +VF+EM++ G PD +F
Sbjct: 276 VHGMKSSGVAPDDYTYNTLISCCRRGSLY---------EEAAQVFEEMKLSGFSPDKVTF 326
Query: 88 SIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147
+ +L VY ++ +P+ +++ L M+ G P++ TY S++ G + +A EL +MV
Sbjct: 327 NTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVE 386
Query: 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
G+ P TY + AM+++ +M+ C PNI T+N LI M R
Sbjct: 387 KGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAG-CKPNICTFNALIKMHGNRGRFA 445
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ +++ ++ D+ ++ L+ + E F EM G +P++ TF TL
Sbjct: 446 EMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLI 505
Query: 268 RGLIQSDMLRTWRRLKKKLDEESIT 292
+ + + K++ E +T
Sbjct: 506 SAYSRCGSFQQAMAVYKRMLEAGVT 530
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 126/292 (43%), Gaps = 23/292 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SLI + + + A +M+E+G++P+V TY LL+G + P
Sbjct: 356 PSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEP---- 411
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC---PT 118
A ++F EMR G +P++ +F+ ++ ++ + + + +E IC P
Sbjct: 412 ------AMRIFGEMRAAGCKPNICTFNALIKMHGNRGR---FAEMMKVFEEIEICNCAPD 462
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ T+ +++ G + + EM R G P +T+N Y AM +Y+
Sbjct: 463 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYK 522
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M E + P++ +YN ++ + +++ +K + +Y L+H
Sbjct: 523 RMLEAGV-TPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANS 581
Query: 239 QKWKEACQYFVEMIEKGLL-PQKVTFETLYRGLIQSDML----RTWRRLKKK 285
++ E E I GL P V +TL + D+L + LKKK
Sbjct: 582 KEI-ERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKK 632
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 131/330 (39%), Gaps = 72/330 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE-R 60
P+V YT+L+ G+ K + A R GEM G +PN+ T+N L+ +H N R
Sbjct: 391 PDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIK-------MHGNRGR 443
Query: 61 FEKTIRNAEK-------------------------------VFDEMRVRGIEPDVTSFSI 89
F + ++ E+ VF EM+ G P+ +F+
Sbjct: 444 FAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNT 503
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ YSR Q ++ M E G+ P +++Y +V+ L G E +E++ EM
Sbjct: 504 LISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGR 563
Query: 150 VSPSAETYNCFFKEYRGRKDANG----AMKLYRQMKED---------------DLCV--- 187
P+ TY Y K+ A ++Y + E DL +
Sbjct: 564 CKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETE 623
Query: 188 -----------PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
P++ T N +I ++ + EI N + S L +Y L++
Sbjct: 624 HAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHS 683
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ + + E++ KGL P +++ T+
Sbjct: 684 RSENFERSEEVLKEILAKGLKPDLISYNTV 713
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 114/270 (42%), Gaps = 20/270 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + +LI + + A M+E GV P++ +YN +L + R
Sbjct: 495 VPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGG------- 547
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK---GIC- 116
+EKVF EM+ +P+ ++ +LH Y+ + + +++++ + E+ G+
Sbjct: 548 ---LWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKE----IERMHTLAEEIYSGLTE 600
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P ++V C + + E E+ + G SP T N Y R+ A ++
Sbjct: 601 PVPVLLKTLVLVNSKCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEI 659
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
M E P++ TYN L+ M + E+ + L DL SY +I C
Sbjct: 660 LNFMNESGFS-PSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYC 718
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ K+A + F M GL+P +T+ T
Sbjct: 719 RNGRMKDASRIFSYMKTYGLVPDVITYNTF 748
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++I + + + A L M E G P++ TYN L+ R +E F
Sbjct: 635 PDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSR------SENF 688
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E++ E+V E+ +G++PD+ S++ V+ Y R + + + ++MK G+ P V T
Sbjct: 689 ERS----EEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVIT 744
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
Y + V + EDA ++ M+++G + TYN Y
Sbjct: 745 YNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGY 787
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
E +++ P++ T N ++ RR + + A ++ + M G P + +++
Sbjct: 627 EELKKKGSPDLSTLNAMIAIYGRR----------QMVAKANEILNFMNESGFSPSLATYN 676
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
+++++SR+ + S + L + KG+ P + +Y +V+ C GR++DA + M
Sbjct: 677 SLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTY 736
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
G+ P TYN F Y A+ + R M + C N +TYN ++
Sbjct: 737 GLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHG-CKRNQNTYNSIV 784
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y SL+Y + + +E L E++ +G++P++++YN ++ CR +
Sbjct: 670 PSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRM------ 723
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A ++F M+ G+ PDV +++ + Y+ + ++ + +M + G T
Sbjct: 724 ----KDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNT 779
Query: 122 YTSVVKCLCSCGRIEDA 138
Y S+V C R DA
Sbjct: 780 YNSIVDGYCKHSRRADA 796
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 4/206 (1%)
Query: 88 SIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147
++++ + + K + LN +++ G V YTS++ S GR DA + +M
Sbjct: 186 AVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEE 245
Query: 148 NGVSPSAETYNCFFKEYRGRKDA--NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
G P+ TYN Y G+ + L MK + P+ +TYN LI +
Sbjct: 246 EGCKPTLITYNVILNVY-GKMGMPWSKISGLVHGMKSSGVA-PDDYTYNTLISCCRRGSL 303
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ +++ +K S D ++ L+ + ++ KEA + EM G P VT+ +
Sbjct: 304 YEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNS 363
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESI 291
L + +LR LK ++ E+ I
Sbjct: 364 LISAYARDGLLREAMELKDQMVEKGI 389
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%)
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ED V N ++I M ++ I N+++ LD+ +YT LI +
Sbjct: 173 REDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGR 232
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
+++A F +M E+G P +T+ +
Sbjct: 233 YRDAVLVFKKMEEEGCKPTLITYNVI 258
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 133/290 (45%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +LI G CK + A + EM +G EPNV+TY +L++ C+
Sbjct: 12 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK---------- 61
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A V DEM +G+ + ++ ++ + K Q +L+ M KG P + T
Sbjct: 62 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 121
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++ LC + E+A L +M+ GV + TYN + R A+KL M
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 181
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +I TYN LI ++ ++ + L + S +LI+GLC
Sbjct: 182 FRGCPLDDI-TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ A ++ +MI +GL P VT+ +L GL ++ + L KL E I
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 290
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%), Gaps = 11/245 (4%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
M+ G P++ TYN L+ G+C++ L +A ++ +EM+++G EP+V +++
Sbjct: 4 SMLSVGCGPDIFTYNTLILGLCKKGYL----------VSARELMNEMQIKGCEPNVITYT 53
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
I++ + + + + + + L+ M KG+ Y ++ LC +++DA + G+M
Sbjct: 54 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 113
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G P T+N A+ LY+ M + + + N TYN LI F+ M
Sbjct: 114 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV-IANTITYNTLIHAFLRRGAMQE 172
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++ N + LD +Y LI LC ++ F +M+ KGL P ++ L
Sbjct: 173 ALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 232
Query: 269 GLIQS 273
GL ++
Sbjct: 233 GLCRT 237
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 124/271 (45%), Gaps = 13/271 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y LI CK ++ A G+M +G +P++ T+N L+ G+C+ +FE
Sbjct: 83 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV------NKFE 136
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP-TVAT 121
+ + ++ +M + G+ + +++ ++H + R Q +L +N M +G CP T
Sbjct: 137 EAL----GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG-CPLDDIT 191
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++K LC G IE L +M+ G++P+ + N + A++ R M
Sbjct: 192 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 251
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P+I TYN LI R +++ ++ + D +Y LI C++ +
Sbjct: 252 HRGL-TPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMF 310
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+A ++ G +P +VT+ L I+
Sbjct: 311 DDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 341
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 26/225 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + SLI+G CK+N+ + A +M+ GV N +TYN L++ RR ++ +
Sbjct: 117 PDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKL 176
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
I +F++M +G+ P+ S +I+++ R
Sbjct: 177 VNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 236
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
Q +L+ L M +G+ P + TY S++ LC GR ++A L ++ G+ P A T
Sbjct: 237 TGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAIT 296
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
YN + ++ L D +PN T+ IL+ F+
Sbjct: 297 YNTLIS-WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFI 340
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 124/252 (49%), Gaps = 11/252 (4%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82
A+ L M+++G+ PN VTY+ L++G C + NA+ +F M +RG+
Sbjct: 154 AKNVLAMMMKQGINPNAVTYSSLMDGYC----------LVNEVNNAKGIFSTMSLRGVTA 203
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
+V S++I+++ + + +++ M + + P V TY S++ LC G+I A +L+
Sbjct: 204 NVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLV 263
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
EM G P TY+ + A+ L + +K+ + PN++TY ILI
Sbjct: 264 DEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGI-RPNMYTYTILIDGLCK 322
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
R++ I+ + + +++YT++IHG C K + EA +M + P +T
Sbjct: 323 GGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALT 382
Query: 263 FETLYRGLIQSD 274
+E + R L +D
Sbjct: 383 YEIIIRSLFDND 394
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 11/195 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y +I G+CKI D A EM R + P+VVTYN L+NG+C+
Sbjct: 204 NVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGK-------- 255
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I A K+ DEM RG PD+ ++S +L + H+ ++ L +K++GI P + TY
Sbjct: 256 --ISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTY 313
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++ LC GR+EDA + +++ G + + TY + + + A+ L +MK
Sbjct: 314 TILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMK- 372
Query: 183 DDLCVPNIHTYNILI 197
D+ C PN TY I+I
Sbjct: 373 DNSCFPNALTYEIII 387
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y SLI G CK +I A + + EM +RG P+++TY+ LL+ +C+ N +
Sbjct: 237 IPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCK------NHQ 290
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K I + ++ +GI P++ +++I++ + + + + + + KG TV
Sbjct: 291 VDKAI----ALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVN 346
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT ++ C+ G ++A LL +M N P+A TY + + + A L R+M
Sbjct: 347 TYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAENLLREM 406
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 1/159 (0%)
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G +++A+ +L M++ G++P+A TY+ Y + N A ++ M + N+ +
Sbjct: 149 GNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTA-NVWS 207
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
YNI+I F + D ++ + +L D+ +Y LI+GLC+ K A + EM
Sbjct: 208 YNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMH 267
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++G P +T+ +L L ++ + L K L ++ I
Sbjct: 268 DRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGI 306
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 143/293 (48%), Gaps = 11/293 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT+LI+G C++ R+D +M E P V TY V+++ A R E
Sbjct: 42 YTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVH-----ALFESGRRME---- 92
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +F EMR RG EP++ +++++++ + K + L+ M EKG+ P+V TY +++
Sbjct: 93 -AINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALI 151
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G +E A+E+L M N +P+ TYN + +K+ + AM L +M E L
Sbjct: 152 DGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRL- 210
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++ TYN LI + +D + N + + + D +Y++ I LC+K + +EA
Sbjct: 211 TPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANV 270
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
F + EKG+ +V + L G ++ + L ++ E S N
Sbjct: 271 LFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYN 323
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YT +I CK +++ R L EM+E+G+ P+V TYN L++G C+
Sbjct: 107 PNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCK---------- 156
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A+++ D M P+ +++ ++ + R ++ L+ M E + P+V T
Sbjct: 157 EGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVT 216
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C G ++ A LL M NGV P TY+ F + A L+ +K
Sbjct: 217 YNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLK 276
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + N Y LI + +MD + + + + + +Y LI GLC+++K
Sbjct: 277 EKGI-KANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKV 335
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+EA MI+KGL T+ L +++
Sbjct: 336 QEALLLMESMIQKGLKCTVPTYTILIVAMLK 366
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 128/299 (42%), Gaps = 31/299 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP--- 57
+P+V Y +LI G+CK ++ A+ L M PN TYN L+ G CR+ ++H
Sbjct: 141 VPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMA 200
Query: 58 ------NERFEKTI----------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
R ++ +A ++ + M G+ PD ++S+ +
Sbjct: 201 LLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLC 260
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + + N +KEKGI YT+++ C G+++DA LL M+ P++
Sbjct: 261 KKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSS 320
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDL-CVPNIHTYNILIGMFMALNRMDMVREIWN 214
TYN + A+ L M + L C + TY ILI + D I +
Sbjct: 321 TYNALIDGLCKERKVQEALLLMESMIQKGLKCT--VPTYTILIVAMLKEGDFDYAHRILD 378
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL---YRGL 270
+ S D+ YT IH C + KEA M E+G++P +T+ + Y GL
Sbjct: 379 QMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGL 437
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 138/324 (42%), Gaps = 55/324 (16%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR-----ASLHP 57
N +YT+LI G+CK ++D A L M+ PN TYN L++G+C+ A L
Sbjct: 283 NEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLM 342
Query: 58 NERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+K ++ A ++ D+M G +PDV ++ +H +
Sbjct: 343 ESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTR 402
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ + D ++ M E+G+ P TYT V+ G + A ++L M G PS TY
Sbjct: 403 GNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTY 462
Query: 158 NC----FFKEYRGRKDAN-------------------------GAMKLYRQMKEDDLCVP 188
+C KE +K N A++L+ +M E C P
Sbjct: 463 SCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHG-CSP 521
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
NI+TY LI + R+ + +++++H+ + Y L++ CE + +A +
Sbjct: 522 NINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLV 581
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQ 272
M+E G LP + L+ GL +
Sbjct: 582 GAMMEHGHLPLLESLNVLFCGLYE 605
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 16/290 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V+ YT +++ + R A EM ERG EPN+ TY V++N +C+ L R
Sbjct: 72 PTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRR- 130
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ DEM +G+ P V +++ ++ Y + + + + L+ M P T
Sbjct: 131 ---------ILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERT 181
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C + A LL +M+ + ++PS TYN + A +L M
Sbjct: 182 YNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMN 241
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ + VP+ TY++ I R++ ++N +K + + YT LI G C+ K
Sbjct: 242 ENGV-VPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL-----IQSDMLRTWRRLKKKL 286
+A M+ + LP T+ L GL +Q +L ++K L
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGL 350
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 146/352 (41%), Gaps = 69/352 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR-----ASLH 56
P+V Y SLI+G CKI +D A R L M E GV P+ TY+V ++ +C++ A++
Sbjct: 212 PSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVL 271
Query: 57 PNERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
N EK I+ +A + D M P+ ++++ ++ +
Sbjct: 272 FNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCK 331
Query: 97 AHKPQLSLDKLNFMKEKGICPTVAT----------------------------------- 121
K Q +L + M +KG+ TV T
Sbjct: 332 ERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYI 391
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+ + C+ G I++AE+++ M GV P A TY Y G N A + ++M
Sbjct: 392 YTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMF 451
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL-DSYTMLIHGLCEKQK 240
D C P+ HTY+ LI + E+ K L + + + + + + K
Sbjct: 452 -DTGCDPSHHTYSCLIKHLLK-------EELTKKYKNVALCDSIPNVFFADVADVWKMMK 503
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
++ A + F +M+E G P T+ L GL + L ++L ++E ++
Sbjct: 504 FETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVS 555
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 2/248 (0%)
Query: 45 LLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL 104
++NG C+ +L + +A VF+ M +G + S++ ++H + +
Sbjct: 1 MVNGYCKLGNL-VEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGI 59
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
+ M+E PTV TYT +V L GR +A L EM G P+ TY
Sbjct: 60 NIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAM 119
Query: 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
++ +M E L VP++ TYN LI + ++ +EI + + + +
Sbjct: 120 CKETKLEEGRRILDEMVEKGL-VPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPN 178
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284
+Y LI G C K+ A +M+E L P VT+ +L G + L + RL
Sbjct: 179 ERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLN 238
Query: 285 KLDEESIT 292
++E +
Sbjct: 239 LMNENGVV 246
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 112/291 (38%), Gaps = 61/291 (20%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
P+V +YT+ I+ +C I AE + M ERGV P+ +TY ++++ L+P
Sbjct: 387 PDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDV 446
Query: 58 ------------------------NERFEKTIRN-------------------------- 67
E K +N
Sbjct: 447 LKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFET 506
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A ++F++M G P++ +++ ++ + + ++ + M E+G+ P+ A Y S++
Sbjct: 507 ALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLN 566
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYN---CFFKEYRGRKDANGAMKLYRQMKEDD 184
C C G DA L+G M+ +G P E+ N C E ++ A Q +D
Sbjct: 567 CCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYND 626
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
V + ILI + D E+ ++ + +Y MLI GL
Sbjct: 627 DEV----AWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 150/323 (46%), Gaps = 33/323 (10%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V +Y++LI G+C I+ + EM+ + V PNVVTY+ L+N +C++ +
Sbjct: 233 DVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQML 292
Query: 63 KTI-------------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
T+ +A KV D M RG EP+ +++ +++ +
Sbjct: 293 DTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKE 352
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN--GVSPSAE 155
+ +L L M +KG P V TY+++VK LC G+I++A +LL ++ + P
Sbjct: 353 GRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVF 412
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
+N +E ++ A ++Y M E NI TYNILI +++ ++ E+W
Sbjct: 413 AFNLVIQELCKQRRLRHAKRVYYTMVERGF-PSNIVTYNILIDGYLSAGKLTKALELWKD 471
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
S + + +YT+LI+GLC+ Q A F + G P + TL L +
Sbjct: 472 AVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESS 531
Query: 276 LRTWRRLKKKL-----DEESITF 293
+ R L +++ D + ++F
Sbjct: 532 VEQARNLFQEMRNANHDPDVVSF 554
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 141/319 (44%), Gaps = 28/319 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-- 58
+P+ Y ++I G CK R+ A+ EM +PN VT++ L++G C+ +
Sbjct: 161 IPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFG 220
Query: 59 --ERFEK---------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
E EK I +++F+EM + + P+V ++S +++
Sbjct: 221 LLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALC 280
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ K + + L+ M + P V YT + L GR DA ++L MV+ G P+
Sbjct: 281 KKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNV 340
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN + A+ + M + P++ TY+ L+ + ++D ++ N
Sbjct: 341 TYNAIINGLCKEGRVDDALGILETMAKKGK-KPDVVTYSTLVKGLCGVGKIDEAVDLLNL 399
Query: 216 VKGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ E + D+ ++ ++I LC++++ + A + + M+E+G VT+ L G + +
Sbjct: 400 LMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSA 459
Query: 274 DMLRTWRRLKKKLDEESIT 292
L L K + I+
Sbjct: 460 GKLTKALELWKDAVDSGIS 478
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 140/344 (40%), Gaps = 53/344 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT L G K R A + L M++RG EPN VTYN ++NG+C+
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCK---------- 351
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFM--KEKGICPTV 119
E + +A + + M +G +PDV ++S ++ K ++D LN + KE I P V
Sbjct: 352 EGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDV 411
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+ V++ LC R+ A+ + MV G + TYN Y A++L++
Sbjct: 412 FAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKD 471
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ + PN TY +LI + + + + ++N + S + Y L+ LC +
Sbjct: 472 AVDSGIS-PNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRES 530
Query: 240 KWKEACQYFVEM--------------IEKGLL---------------------PQKVTFE 264
++A F EM I G L P +TF
Sbjct: 531 SVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFS 590
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDE-----ESITFGSEFQNYHFK 303
L ++ L L +++ +++ F S + Y K
Sbjct: 591 ILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLK 634
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 140/303 (46%), Gaps = 22/303 (7%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV + L+ G+C+ A M + P+ V+YN ++NG+C+
Sbjct: 128 NVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK----------G 177
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + A+++F EM+ +P+ +FS ++ + + + L M++ G+ V Y
Sbjct: 178 KRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVY 237
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++++ CS G IE +EL EM+R V+P+ TY+C ++ A ++ M
Sbjct: 238 SALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTG 297
Query: 183 DDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P++ Y +L G+ D ++ + VK E ++ +Y +I+GLC++ +
Sbjct: 298 CKV-RPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNV-TYNAIINGLCKEGRV 355
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
+A M +KG P VT+ TL +GL ++ + +D ++ EF H
Sbjct: 356 DDALGILETMAKKGKKPDVVTYSTLVKGLCG------VGKIDEAVDLLNLLMSKEF---H 406
Query: 302 FKP 304
KP
Sbjct: 407 IKP 409
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT LI G CK+ + +A+ + G P V YN L+ +CR
Sbjct: 479 PNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCR---------- 528
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ A +F EMR +PDV SF+I++ +A + + + L M + P T
Sbjct: 529 ESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNIT 588
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ ++ G++++A L MV G P A ++ K Y + + + +QM
Sbjct: 589 FSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMA 648
Query: 182 EDDLCVPNIHTYNIL 196
+ D+ + + T IL
Sbjct: 649 DKDVVLDSKLTSTIL 663
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 4/234 (1%)
Query: 54 SLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK 113
+L N R K + V +M + P TS S ++ + KP + L + ++
Sbjct: 64 TLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKR 123
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGA 173
G V + ++K C G A +L M RN + P +YN K A
Sbjct: 124 GFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEA 183
Query: 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
+L+++MK + C PN T++ LI F ++ + ++ L D+ Y+ LI
Sbjct: 184 KELFKEMKGGE-CKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALIS 242
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
G C K + + F EM+ K + P VT+ L L + + W+ + LD
Sbjct: 243 GFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKK---QKWKEAAQMLD 293
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 11/262 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + Y LI G+C+ I A L +M+ER ++PNVVTYN+L++G C+
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCK---------- 461
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +A K+ M G+ PD ++S+ + + + + +KEKGI
Sbjct: 462 EGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVI 521
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C G++ D LL +M+ G P++ TYN Y K+ A L M
Sbjct: 522 YSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMI 581
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ D+ P TY ILI + + D ++++ + + D+ YT IH C +
Sbjct: 582 KRDI-EPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRL 640
Query: 242 KEACQYFVEMIEKGLLPQKVTF 263
K+A +M KG++P + +
Sbjct: 641 KDAEVLICKMNAKGIMPDTMLY 662
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 133/285 (46%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YTSLI G+C+ +D A M +G N V+Y L++G C + +
Sbjct: 242 YTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCE----------ARRVD 291
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A K+F +M P V ++++++ + + +L+ M EK P V TYT ++
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC +DA+++L M+ G+ PS TYN Y + + A+++ M+ ++ C
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN-C 410
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN TYN LI F + + + + +L ++ +Y +LIHG C++ A +
Sbjct: 411 SPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYK 470
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
M E GL+P + T+ L + ++ R L + L E+ I
Sbjct: 471 LLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI 515
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 141/299 (47%), Gaps = 16/299 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT+LI+G+C+ R+D A + +M E P V TY V++ +C+ KT
Sbjct: 277 YTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLG--------RKT-- 326
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +F EM + +P+V ++++++ + LN M EKG+ P+V TY +++
Sbjct: 327 EALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALI 386
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G A E+L M N SP+A TYN + K+ + AM L +M E L
Sbjct: 387 DGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKL- 445
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+ TYNILI + ++ + + S L D +Y++ I LC++ +EA
Sbjct: 446 QPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARS 505
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFGSEFQNY 300
F + EKG+ +V + TL G + + R L K+ SIT+ S Y
Sbjct: 506 LFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGY 564
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 141/332 (42%), Gaps = 28/332 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PNV YT LI C+ + D A++ L M+E+G+ P+VVTYN L++G C++
Sbjct: 342 PNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEI 401
Query: 54 -------SLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ PN R K I A + +M R ++P+V +++I++H +
Sbjct: 402 LSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCK 461
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ L+ M E G+ P TY+ + LC G +E+A L + G+ +
Sbjct: 462 EGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVI 521
Query: 157 YNCFFKEY-RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
Y+ Y + K ++G L + + CVPN TYN LI + R + +
Sbjct: 522 YSTLIDGYCKVGKVSDGRFLLDKMLSAG--CVPNSITYNSLIDGYCKEKNFKEARLLVDI 579
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ ++ D+YT+LI L + ++ +A F +M+ G P +
Sbjct: 580 MIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGR 639
Query: 276 LRTWRRLKKKLDEESITFGSEFQNYHFKPYRR 307
L+ L K++ + I + Y R
Sbjct: 640 LKDAEVLICKMNAKGIMPDTMLYTLFIDAYGR 671
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 123/281 (43%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V+ YT +I+ C++ R A EM E+ +PNV TY VL+ +C
Sbjct: 307 PTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCE---------- 356
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A+K+ + M +G+ P V +++ ++ Y + +L+ L+ M+ P T
Sbjct: 357 DSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNART 416
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C I A LL +M+ + P+ TYN D A KL M
Sbjct: 417 YNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMN 476
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L VP+ TY++ I ++ R ++ +K + + Y+ LI G C+ K
Sbjct: 477 ESGL-VPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKV 535
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ +M+ G +P +T+ +L G + + R L
Sbjct: 536 SDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLL 576
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 126/294 (42%), Gaps = 42/294 (14%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N +Y++LI G+CK+ ++ L +M+ G PN +TYN L++G C+ E
Sbjct: 518 NEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCK----------E 567
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + A + D M R IEP +++I++ + + + D + M G P V Y
Sbjct: 568 KNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIY 627
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+ + CS GR++DAE L+ +M G+ P Y F Y +GA + ++M E
Sbjct: 628 TAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHE 687
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDM-----------------VREIWNHVKGSELGLDL 225
C P+ +TY+ LI ++ W V E LDL
Sbjct: 688 VG-CEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVD-YEFTLDL 745
Query: 226 -------------DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++Y I GLC+ + A + F M EKG P + + +L
Sbjct: 746 FGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSL 799
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 36/195 (18%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M + + P + T ++V C G + +AE + ++V+ G+S TY Y K+
Sbjct: 195 MLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKN 254
Query: 170 ANG-----------------------------------AMKLYRQMKEDDLCVPNIHTYN 194
+ A+KL+ QM ED+ C P + TY
Sbjct: 255 VDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN-CWPTVRTYT 313
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
++I L R ++ + ++ +YT+LI LCE + +A + M+EK
Sbjct: 314 VIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEK 373
Query: 255 GLLPQKVTFETLYRG 269
GL+P VT+ L G
Sbjct: 374 GLIPSVVTYNALIDG 388
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 16/158 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ +YT I + + ID A L M E G EP+ TY+ L+ + ++ P E
Sbjct: 656 MPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL---SNAKPKEV 712
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + G+ + FS + + R + +LD M E G P
Sbjct: 713 SSSSELSDLS-------SGVASN--DFS---NCWRRVDY-EFTLDLFGKMAEHGCAPNAN 759
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
TY + LC G +E A L M G SP+ + YN
Sbjct: 760 TYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYN 797
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%)
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
DD+ PNI T N ++ + L + + + + L LD +YT LI G C +
Sbjct: 197 DDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVD 256
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
A F+ M KG L +V++ L G ++ + +L ++ E++
Sbjct: 257 AANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN 304
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR 51
PN Y I G CK+ +++A R M E+G PN YN LL C+
Sbjct: 756 PNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQ 805
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 11/302 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G+CK+NRID A R L M + P+ VTYN+++ +C R L
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL---- 207
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A KV D++ +P V +++I++ +L L+ M +G+ P + T
Sbjct: 208 ------ALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFT 261
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ +C G ++ A E++ + G P +YN + + KL +M
Sbjct: 262 YNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 321
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C PN+ TY+ILI +++ + +K L D SY LI C + +
Sbjct: 322 SEK-CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 380
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
A ++ MI G LP V + T+ L ++ + KL E + S N
Sbjct: 381 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 440
Query: 302 FK 303
F
Sbjct: 441 FS 442
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 129/277 (46%), Gaps = 15/277 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V YT LI +D A + L EM+ RG++P++ TYN ++ G+C+ + +R
Sbjct: 222 PTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV---DRA 278
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ IRN E ++G EPDV S++I+L K + + M + P V T
Sbjct: 279 FEMIRNLE-------LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYRQ 179
Y+ ++ LC G+IE+A LL M G++P A +Y+ + GR D A++
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV--AIEFLET 389
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M D C+P+I YN ++ + D EI+ + + SY + L
Sbjct: 390 MISDG-CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 448
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
A +EM+ G+ P ++T+ ++ L + M+
Sbjct: 449 DKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMV 485
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 130/265 (49%), Gaps = 12/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + T LI G+ + + A R + E++E+ +P+V YN L+NG C+
Sbjct: 118 PDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDVFAYNALINGFCKM--------- 167
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I +A +V D MR + PD +++I++ K L+L L+ + PTV T
Sbjct: 168 -NRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVIT 226
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ G +++A +LL EM+ G+ P TYN + + A ++ R +
Sbjct: 227 YTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNL- 285
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P++ +YNIL+ + + + ++ + + ++ +Y++LI LC K
Sbjct: 286 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 345
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+EA M EKGL P +++ L
Sbjct: 346 EEAMNLLKLMKEKGLTPDAYSYDPL 370
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 134/275 (48%), Gaps = 17/275 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++I G CK +D A + + +G EP+V++YN+LL RA L+ +
Sbjct: 257 PDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILL-----RALLNQGKWE 311
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E EK+ +M +P+V ++SI++ R K + +++ L MKEKG+ P +
Sbjct: 312 E-----GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 366
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C GR++ A E L M+ +G P YN A+ A++++ ++
Sbjct: 367 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 426
Query: 182 EDDLCVPNIHTYNILIGMFMAL-NRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLCEK 238
E C PN +YN MF AL + D +R + ++ G+D D +Y +I LC +
Sbjct: 427 EVG-CSPNSSSYNT---MFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCRE 482
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+A + V+M P VT+ + G ++
Sbjct: 483 GMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 517
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 122/267 (45%), Gaps = 12/267 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+ LI C+ +I+ A L M E+G+ P+ +Y+ L+ CR L F
Sbjct: 327 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 386
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+T M G PD+ +++ VL + K +L+ + E G P ++
Sbjct: 387 LET----------MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 436
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ L S G A ++ EMV NG+ P TYN + A +L M+
Sbjct: 437 YNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMR 496
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P++ TYNI++ F +R++ ++ + + G+ + +YT+LI G+
Sbjct: 497 SCEF-HPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYR 555
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYR 268
EA + +++ + + +F+ L+R
Sbjct: 556 AEAMELANDLVRINAISE-YSFKRLHR 581
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+ H R+ SL L M KG P V T ++K + + A ++ E++
Sbjct: 91 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKF 149
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P YN + + A ++ +M+ D P+ TYNI+IG + ++D+
Sbjct: 150 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS-PDTVTYNIMIGSLCSRGKLDLA 208
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ + + + +YT+LI + EA + EM+ +GL P T+ T+ RG
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268
Query: 270 LIQSDML 276
+ + M+
Sbjct: 269 MCKEGMV 275
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 14/261 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++K ++ GWC + + A+RF ++I +P+ TY + +N + + L
Sbjct: 257 PDIKSMNVILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLS----- 311
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+F M +G PDV + ++ + +L+ L M E+ P VAT
Sbjct: 312 -----TAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVAT 366
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++K LC R E ELL +M + G P+A TY K + ++ G + +
Sbjct: 367 YNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEVPGIL----ERM 422
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + C N YN+++ ++M +R + ++ + +G D +YT++IHGL +K +
Sbjct: 423 ERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRM 482
Query: 242 KEACQYFVEMIEKGLLPQKVT 262
+A YF +M G++P+ T
Sbjct: 483 DDALSYFKQMTLMGMVPEPRT 503
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 114/268 (42%), Gaps = 12/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P ++ ++ ++ R + EM +R N T+ VLLN R A+ H E
Sbjct: 153 PGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLXNERTFGVLLN---RYAAAHKTE-- 207
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+F + + G E D+ +F +L R +++ + L K+ P + +
Sbjct: 208 -----EAVKIFYKRKGLGFELDLIAFQTLLMSLCRYKHVEMA-EFLFHSKKNEFPPDIKS 261
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ C G + +A+ +++ + P TY F + A+KL++ M
Sbjct: 262 MNVILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMW 321
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P++ N +I R+ E+ + + D+ +Y LI LC+ Q++
Sbjct: 322 EKG-CNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRF 380
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ + +M +KG LP T+ L +
Sbjct: 381 EKVYELLDDMEQKGCLPNARTYGYLLKS 408
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 94/239 (39%), Gaps = 12/239 (5%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
E G P +N +L+ + R H ++FDEM R + +F ++L
Sbjct: 148 ESGYSPGCGVHNEILDILGRMRRFH----------EMTQLFDEMSKRKGLXNERTFGVLL 197
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ Y+ AHK + ++ K G + + +++ LC +E AE L +N
Sbjct: 198 NRYAAAHKTEEAVKIFYKRKGLGFELDLIAFQTLLMSLCRYKHVEMAE-FLFHSKKNEFP 256
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P ++ N + A + + + C P+ TY I I ++ +
Sbjct: 257 PDIKSMNVILNGWCVLGSLREAKRFWNDIITSK-CKPDKFTYGIFINSLTKAGKLSTAVK 315
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ + D+ +I LC K++ EA + EM E+ P T+ +L + L
Sbjct: 316 LFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHL 374
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 6/173 (3%)
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
E G P + ++ L R + +L EM + + T+ Y
Sbjct: 148 ESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLXNERTFGVLLNRYAAAHKTE 207
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR--EIWNHVKGSELGLDLDSYT 229
A+K++ + K + I +L M+L R V E H K +E D+ S
Sbjct: 208 EAVKIFYKRKGLGFELDLIAFQTLL----MSLCRYKHVEMAEFLFHSKKNEFPPDIKSMN 263
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++++G C +EA +++ ++I P K T+ L ++ L T +L
Sbjct: 264 VILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKL 316
>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 128/261 (49%), Gaps = 14/261 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +K + ++ GWC + A+R E+I ++P++ TY +N + + L
Sbjct: 250 PVIKSWNIILNGWCVKGSLPDAKRVWNEIIASKLKPDLFTYGTFINALTKAGKLS----- 304
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+F M +GI PDV + ++ K +L M ++G VAT
Sbjct: 305 -----TAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALKIFGEMNDRGCQADVAT 359
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R E ELL +M + G SP+ TY K +D M L ++M+
Sbjct: 360 YNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYILKTTEKPRD---VMNLIQRME 416
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C + TYN+++ +++++ V+++W ++ + G D S+T+++HGL + +
Sbjct: 417 ESG-CKLDSDTYNLILNLYVSMKYEKGVQQVWEEMERNGSGPDQRSFTIMVHGLHSQGQL 475
Query: 242 KEACQYFVEMIEKGLLPQKVT 262
+A QY+ M +G+ P+ T
Sbjct: 476 DQALQYYTTMKSRGMTPEPRT 496
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 95/208 (45%), Gaps = 4/208 (1%)
Query: 63 KTIRNAEKVFDEM--RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K +R ++FDE+ + RG+ F+++L+ Y+ AHK Q +++ + G +
Sbjct: 160 KKVRLMRQLFDEIPEQRRGLVVTNRMFAVLLNRYAGAHKVQEAIEIFYKRNDYGFEVDLV 219
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ ++ LC +E+AE L + ++ P +++N + + A +++ ++
Sbjct: 220 GFQILLMSLCRYKHVEEAEALFLQK-KDEFPPVIKSWNIILNGWCVKGSLPDAKRVWNEI 278
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L P++ TY I ++ +++ + + D+ +I LC K+K
Sbjct: 279 IASKL-KPDLFTYGTFINALTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKK 337
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYR 268
EA + F EM ++G T+ TL +
Sbjct: 338 IPEALKIFGEMNDRGCQADVATYNTLIK 365
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 138/282 (48%), Gaps = 14/282 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G+ K +D A EM++RG+ PNVVTY+ ++ +C+
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCK---------- 246
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A +V M G+ P+ +++ ++H Y + +P+ ++ L M G+ P V T
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR +A ++ M + G+ P TY + Y + L M
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN + ++ILI + ++D +++ ++ L D +Y +I LC+ +
Sbjct: 367 RNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
++A +YF +MI++ L P + + +L L D W + K
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD---KWDKAK 464
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 121/250 (48%), Gaps = 11/250 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y+S+I CK +D A L M++ GV PN TYN +++G C +S P E
Sbjct: 231 LPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC--SSGQPKE- 287
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +M G+EPDV +++ ++ + + + + M ++G+ P +
Sbjct: 288 -------AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++++ + G + + LL MVRNG+ P+ ++ Y + + AM ++ +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L P+ TY +IG+ R++ + + L Y LIH LC K
Sbjct: 401 RQQGL-NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 241 WKEACQYFVE 250
W +A YF++
Sbjct: 460 WDKAKDYFLK 469
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 19/297 (6%)
Query: 7 YTSLIYGWCKINRI-DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+T L+ G C R D + L M + G PNV +YN+LL G+C E
Sbjct: 129 FTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCD----------ENRS 178
Query: 66 RNAEKVFDEMRVRGIE--PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+ A ++ M G + PDV S++ V++ + + + + M ++GI P V TY+
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
S++ LC ++ A E+L MV+NGV P+ TYN Y A+ ++M D
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
+ P++ TYN L+ R R++++ + L ++ +Y L+ G K E
Sbjct: 299 GV-EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357
Query: 244 ACQYFVEMIEKGLLPQKVTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFGS 295
M+ G+ P F L +G + ML + ++ L+ +++T+G+
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 6/215 (2%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
+A VFDE+ RG + + L +R H P ++ + N M G + P + TY
Sbjct: 37 DARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C GR++ LG +++ G A + K K + AM + +
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCEKQKW 241
C+PN+ +YNIL+ NR E+ + G + D+ SYT +I+G ++
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+A + EM+++G+LP VT+ ++ L ++ +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 27/281 (9%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V PN+ TY +L+ C L + + N K +G D +F+ +L
Sbjct: 87 VTPNLCTYGILIGSCCCAGRL---DLGFAALGNVIK-------KGFRVDAIAFTPLLKGL 136
Query: 95 SRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG--VS 151
+ ++D L M + G P V +Y ++K LC R ++A ELL M +G
Sbjct: 137 CADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP 196
Query: 152 PSAETY----NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
P +Y N FFKE D + A Y +M + + +PN+ TY+ +I MD
Sbjct: 197 PDVVSYTTVINGFFKE----GDLDKAYGTYHEMLDRGI-LPNVVTYSSIIAALCKAQAMD 251
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
E+ + + + + +Y ++HG C + KEA + +M G+ P VT+ +L
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311
Query: 268 RGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNYHFK 303
L ++ R++ K+ L E T+G+ Q Y K
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--DDLCVPNIHTY 193
EDA + E++R G S NC + R A+ Y +M D PN+ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADV-ARHSPAAAVSRYNRMARAGADEVTPNLCTY 94
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV-EMI 252
ILIG R+D+ +V +D ++T L+ GLC ++ +A + M
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154
Query: 253 EKGLLPQKVTFETLYRGL 270
+ G +P ++ L +GL
Sbjct: 155 QLGCIPNVFSYNILLKGL 172
>gi|413938979|gb|AFW73530.1| ATP binding protein [Zea mays]
Length = 551
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 14/257 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + Y++L +GWC+ A + L EMI+ P TY + C
Sbjct: 250 NAETYSTLFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAIESFCSAG--------- 300
Query: 63 KTIRNAEKVFDEMRVRGI---EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ A ++F+ MR G+ P ++SI++ ++A + + + L+ M+ G P V
Sbjct: 301 -LVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELLSDMRTCGCMPDV 359
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY +++ +C GR++ A +L EM R G P TYNCF ++A+ A++L +
Sbjct: 360 TTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLRNADDALELCER 419
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E C P++HTYN+L+ MF + +IW + +D+Y ++I+GL +
Sbjct: 420 MIEAH-CEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRAIDTYEIMIYGLFDCG 478
Query: 240 KWKEACQYFVEMIEKGL 256
+ + A E+I + +
Sbjct: 479 ETEYATALLDEVINRDM 495
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 16/185 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V Y LI G C + R+D A R L EM G P++VTYN LN +C
Sbjct: 356 MPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLC---------- 405
Query: 61 FEKTIRNAEKVF---DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
++RNA+ + M EP V ++++++ ++ + +LD M ++G
Sbjct: 406 ---SLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQR 462
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ TY ++ L CG E A LL E++ + S + ++ + +L
Sbjct: 463 AIDTYEIMIYGLFDCGETEYATALLDEVINRDMKLSYKKFDAIMLRLSAVGNLGAIHRLS 522
Query: 178 RQMKE 182
M++
Sbjct: 523 EHMRK 527
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 47/200 (23%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P K Y+ +I K +R++ L +M G P+V TY L+ G+C L
Sbjct: 322 PTAKTYSIMIVALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRLD----- 376
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +V DEM G PD+ +++ L+V
Sbjct: 377 -----AAYRVLDEMGRAGFPPDIVTYNCFLNV---------------------------- 403
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
LCS +DA EL M+ PS TYN + +A+ A+ ++ +M
Sbjct: 404 -------LCSLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMD 456
Query: 182 EDDLCVPNIHTYNILI-GMF 200
+ C I TY I+I G+F
Sbjct: 457 KRG-CQRAIDTYEIMIYGLF 475
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P ++ C CG +++AE + G + R + +AETY+ F + +D AMK+
Sbjct: 215 PETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLG-NAETYSTLFFGWCRARDPKKAMKV 273
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD---LDSYTMLIH 233
+M + P TY I F + + RE++ ++ L + +Y+++I
Sbjct: 274 LEEMIQMKH-TPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIV 332
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
L + + +E + +M G +P T++ L G+
Sbjct: 333 ALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGM 369
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
P N+L+ F + ++ VK LG + ++Y+ L G C + K+A +
Sbjct: 215 PETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLG-NAETYSTLFFGWCRARDPKKAMKV 273
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
EMI+ P+ T+ + ++ R L + + E +T S
Sbjct: 274 LEEMIQMKHTPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSS 321
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 143/289 (49%), Gaps = 35/289 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+LI G K ++D+A L M E G PNV +YN ++NG+ +
Sbjct: 553 PNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSK---------- 602
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AEK+ D+M +G+ P+V +++ ++ R + Q + + M+++ P + T
Sbjct: 603 ENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 662
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ LC G+ ++AE LL EM R G++P T+ + + A L R+M
Sbjct: 663 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 722
Query: 182 EDDLCVPNIHTYNILIGMF--------------------MALNRMDMVREIWNHV--KGS 219
D C PN TY++L+ + + D+ EI +++ + S
Sbjct: 723 -DVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMS 781
Query: 220 ELGLD--LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
E+G + LD+Y+ L+ GLC K ++ EA Q +M E+G P + + +L
Sbjct: 782 EIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSL 830
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 149/331 (45%), Gaps = 35/331 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
PNV+ YT+LI G ++ ++++A +M++ G+ PN VTYN L+N +C
Sbjct: 378 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 437
Query: 51 -----RRASLHPNERFEKTIRN---------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
SL + + + I+ A +F++M G P V +++ +++ Y
Sbjct: 438 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 497
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ L+ MKE G P TY +V G++E A EMV G++P+ +
Sbjct: 498 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 557
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + + A+ L +M+E C PN+ +YN +I NR +I + +
Sbjct: 558 YTTLIDGHSKDGKVDIALSLLERMEEMG-CNPNVESYNAVINGLSKENRFSEAEKICDKM 616
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD-- 274
L ++ +YT LI GLC + + A + F +M ++ LP T+ +L GL Q
Sbjct: 617 AEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA 676
Query: 275 -----MLRTWRRLKKKLDEESITFGSEFQNY 300
+L+ R K L + +TF S +
Sbjct: 677 DEAEILLKEMER--KGLAPDEVTFTSLIDGF 705
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 134/287 (46%), Gaps = 11/287 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + +LI K ++ AE L ++ + + P+V TY L+ G CR +L
Sbjct: 238 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL---- 293
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A VFD M G +P+ ++S +++ + +LD L M EKGI PTV T
Sbjct: 294 ------AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYT 347
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT + LC+ E+A EL+ M + G P+ +TY A+ LY +M
Sbjct: 348 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 407
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ L VPN TYN LI R +I++ ++G + +Y +I GLC
Sbjct: 408 KEGL-VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 466
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
++A F +M++ G LP VT+ TL G + + RL + E
Sbjct: 467 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 513
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 142/329 (43%), Gaps = 61/329 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
PN Y++LI G C R+D A L EMIE+G+EP V TY + + +C
Sbjct: 308 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIEL 367
Query: 51 ----RRASLHPN-ERFEKTIRNAEKV---------FDEMRVRGIEPDVTSFSIVLHVYSR 96
++ PN + + I ++ + +M G+ P+ +++ +++
Sbjct: 368 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 427
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +L ++M+ G TY ++K LC G IE A L +M++ G P+ T
Sbjct: 428 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 487
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF---------------- 200
YN Y + + N A +L MKE+ C P+ TYN L+ F
Sbjct: 488 YNTLINGYLTKGNVNNAARLLDLMKENG-CEPDEWTYNELVSGFSKWGKLESASFYFQEM 546
Query: 201 ----MALNRMDMVREIWNHVKGSELGLDL---------------DSYTMLIHGLCEKQKW 241
+ N + I H K ++ + L +SY +I+GL ++ ++
Sbjct: 547 VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRF 606
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA + +M E+GLLP +T+ TL GL
Sbjct: 607 SEAEKICDKMAEQGLLPNVITYTTLIDGL 635
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 117/271 (43%), Gaps = 46/271 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V Y +LI G+ ++ A R L M E G EP+ TYN L++G + L
Sbjct: 482 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL----- 536
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A F EM G+ P+ S++ ++ +S+ K ++L L M+E G P V
Sbjct: 537 -----ESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVE 591
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y +V+ L R +AE++ +M G+ P+ TY A K++ M
Sbjct: 592 SYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 651
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E C+PN++T Y+ LI+GLC++ K
Sbjct: 652 -EKRKCLPNLYT-----------------------------------YSSLIYGLCQEGK 675
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
EA EM KGL P +VTF +L G +
Sbjct: 676 ADEAEILLKEMERKGLAPDEVTFTSLIDGFV 706
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 139/348 (39%), Gaps = 52/348 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------- 54
PNV+ Y ++I G K NR AE+ +M E+G+ PNV+TY L++G+CR
Sbjct: 588 PNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 647
Query: 55 LHPNER------------------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
H E+ E AE + EM +G+ PD +F+ ++ +
Sbjct: 648 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVV 707
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCS-CGRIED------------------ 137
+ + L M + G P TY+ ++K L C +E+
Sbjct: 708 LGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKD 767
Query: 138 -----AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
LL M G P+ +TY+ + A +L + MKE C
Sbjct: 768 VNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIY 827
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
Y++LI L +D +I++ ++ L L Y LI LC+ + +EA F M+
Sbjct: 828 YSLLIAHCKNL-EVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNML 886
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
EK ++ + L GL++ L +L + ES F Q Y
Sbjct: 887 EKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM--ESKNFTPNIQTY 932
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 37/295 (12%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y+SLIYG C+ + D AE L EM +G+ P+ VT+ L++G
Sbjct: 657 LPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGR------ 710
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH-------------------VYS-RAHKP 100
I +A + M G +P+ ++S++L VYS H+
Sbjct: 711 ----IDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEK 766
Query: 101 QLSLD----KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ + L M E G PT+ TY+++V LC GR +AE+L+ +M G P E
Sbjct: 767 DVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 826
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + + + A+K++ ++ + ++ Y LI +++ + +++++
Sbjct: 827 YYSLLIAHCKNLEVDHALKIFHSIEAKGFQL-HLSIYRALICALCKAGQVEEAQALFDNM 885
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE-KGLLPQKVTFETLYRGL 270
E D +T+L+ GL K+ + C + ++E K P T+ L R L
Sbjct: 886 LEKEWNADEIVWTVLVDGLL-KEGELDLCMKLLHIMESKNFTPNIQTYVILGREL 939
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 103/211 (48%), Gaps = 2/211 (0%)
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+FE + A ++ +M GI+P + +F+ ++++ S+ K + + L+ + + + P V
Sbjct: 217 KFE-MVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDV 275
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYTS++ C ++ A + MV+ G P++ TY+ + A+ + +
Sbjct: 276 FTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE 335
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E + P ++TY + I A+ + E+ +K ++ +YT LI GL
Sbjct: 336 MIEKGI-EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 394
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
K + A + +M+++GL+P VT+ L L
Sbjct: 395 KLEVAIGLYHKMLKEGLVPNTVTYNALINEL 425
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 104/233 (44%), Gaps = 1/233 (0%)
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
R E+ IR +E+ G + S + +L ++ + + + M GI P++
Sbjct: 181 RNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSL 240
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+ +++ L G++ +AE +L ++ + +SP TY + ++ + A ++ +
Sbjct: 241 LTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDR 300
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M ++ C PN TY+ LI R+D ++ + + + +YT+ I LC +
Sbjct: 301 MVKEG-CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIE 359
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+EA + M ++G P T+ L GL + L L K+ +E +
Sbjct: 360 HEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 412
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 142/299 (47%), Gaps = 46/299 (15%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT+LI+G+C++ +ID A +M E G P+V TY VL+ C E ++T
Sbjct: 263 YTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFC--------EVGKET-- 312
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A K F+EM GIEP+V ++++++ + + K ++ L+ M EKG+ +V + +++
Sbjct: 313 EALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALI 372
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G +EDA +L M N V P++ TYN + +K + AM L +M E+ L
Sbjct: 373 DGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLS 432
Query: 187 VPNIHTYNILI-GMFMA----------------------------------LNRMDMVRE 211
PN+ TYN LI G+ A + +++ +
Sbjct: 433 -PNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQ 491
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ +K + YT LI G C+ +K+ +A F M+ +G P +TF L GL
Sbjct: 492 VFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGL 550
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 128/296 (43%), Gaps = 44/296 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + +++ CKI + +A+ + +++ G + TY L+ G C+ L
Sbjct: 188 PNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHEL------ 241
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A KVF+ M G + S++ ++H + K +L+ MKE G P V T
Sbjct: 242 ----GDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPT 297
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDA--------- 170
YT +V C G+ +A + EMV NG+ P+ TY + G+ D
Sbjct: 298 YTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTML 357
Query: 171 -----------NGAMKLY--RQMKEDDLCV----------PNIHTYNILIGMFMALNRMD 207
N + Y R M ED +CV PN TYN LI F MD
Sbjct: 358 EKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMD 417
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
+ N + ++L +L +Y LIHGLC+ + A + MI+ G +P + TF
Sbjct: 418 RAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTF 473
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + Y LI G+C+ +D A L +M E + PN+VTYN L++G+C+
Sbjct: 398 PNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCK---------- 447
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + +A ++ M G PD +F + + K + + +KEK
Sbjct: 448 ARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFL 507
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C + DA L M+ G P++ T+N R AM L M
Sbjct: 508 YTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMG 567
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ D P +HTY ILI + + D + + S ++ +YT I C + +
Sbjct: 568 KFD-AKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRL 626
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
EA + V++ E+G+L ++ L
Sbjct: 627 LEAEEMVVKIKEEGILLDSFIYDVL 651
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 131/328 (39%), Gaps = 72/328 (21%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+YT+LI G+CK + A M+ G PN +T+NVLL+G+ R E +
Sbjct: 507 LYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGL----------RKEGKV 556
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+A + D M +P V +++I++ R + L+ M G P V TYT+
Sbjct: 557 EDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAF 616
Query: 126 VKCLCSCGRIEDAEELL--------------------------------GEMVR---NGV 150
+K C GR+ +AEE++ G ++R G
Sbjct: 617 IKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGC 676
Query: 151 SPSAETYNCFFKEYRGRK--------DANGA------------------MKLYRQMKEDD 184
PS +TY+ K K D N L+ +M E
Sbjct: 677 EPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQG 736
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
CVPN++TY+ LI + + + ++NH+K S + + + L+ C+ +EA
Sbjct: 737 -CVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEA 795
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ M+E L +++ L GL +
Sbjct: 796 LRLLDSMMEYNHLAHLESYKLLVCGLFE 823
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 142/328 (43%), Gaps = 43/328 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + + + I CK+ +++ A + + E+ E N Y L++G C+ E+
Sbjct: 467 VPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKA------EK 520
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F +A +F M G P+ +F+++L + K + ++ ++ M + PTV
Sbjct: 521 FS----DAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVH 576
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT +++ + + A L +M+ +G P+ TY F K Y + A ++ ++
Sbjct: 577 TYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKI 636
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMD-----MVRE-------------------IWNHV 216
KE+ + + + Y++L+ + + ++D ++R I+
Sbjct: 637 KEEGILLDSF-IYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKY 695
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEA-----CQYFVEMIEKGLLPQKVTFETLYRGLI 271
+GLDL+S + + WK A F +M+E+G +P T+ L +GL
Sbjct: 696 NKEGMGLDLNSTNISVDN---ANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLC 752
Query: 272 QSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ + L RL + E I+ N
Sbjct: 753 KVEHLSLAFRLFNHMKESGISPSENIHN 780
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR 51
+PNV Y+ LI G CK+ + +A R M E G+ P+ +N LL+ C+
Sbjct: 738 VPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCK 788
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 133/290 (45%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +LI G CK + A + EM +G EPNV+TY +L++ C+
Sbjct: 405 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK---------- 454
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A V DEM +G+ + ++ ++ + K Q +L+ M KG P + T
Sbjct: 455 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 514
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++ LC + E+A L +M+ GV + TYN + R A+KL M
Sbjct: 515 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 574
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +I TYN LI ++ ++ + L + S +LI+GLC
Sbjct: 575 FRGCPLDDI-TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 633
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ A ++ +MI +GL P VT+ +L GL ++ + L KL E I
Sbjct: 634 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 683
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 16/271 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +Y +LI+ K+ R++ + L EM+ G P+V T+N ++G+C+ +H
Sbjct: 267 VPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIH---- 322
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+ D M +RG P+ ++ +++H R K +D+ + K P V
Sbjct: 323 ------EAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGK----VDEARMLLNKVPNPNVV 372
Query: 121 TYTSVVKCLCSCGRIEDAEELLGE-MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+ +++ S GR+++A+ ++ E M+ G P TYN + A +L +
Sbjct: 373 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 432
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ C PN+ TY ILI F R++ R + + + G L L+ Y LI LC+ +
Sbjct: 433 MQIKG-CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 491
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
K ++A F +M KG P TF +L GL
Sbjct: 492 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 522
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 11/270 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y LI CK ++ A G+M +G +P++ T+N L+ G+C+ +FE
Sbjct: 476 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV------NKFE 529
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A ++ +M + G+ + +++ ++H + R Q +L +N M +G TY
Sbjct: 530 E----ALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 585
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++K LC G IE L +M+ G++P+ + N + A++ R M
Sbjct: 586 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 645
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L P+I TYN LI R +++ ++ + D +Y LI C++ +
Sbjct: 646 RGL-TPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 704
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+A ++ G +P +VT+ L I+
Sbjct: 705 DAHLLLSRGVDSGFIPNEVTWYILVSNFIK 734
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 26/225 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + SLI+G CK+N+ + A +M+ GV N +TYN L++ RR ++ +
Sbjct: 510 PDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKL 569
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
I +F++M +G+ P+ S +I+++ R
Sbjct: 570 VNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 629
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
Q +L+ L M +G+ P + TY S++ LC GR ++A L ++ G+ P A T
Sbjct: 630 TGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAIT 689
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
YN + ++ L D +PN T+ IL+ F+
Sbjct: 690 YNTLI-SWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFI 733
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 19/263 (7%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
EM+ +G+ P V T+ V++ +C + +A + +M G P+ +
Sbjct: 225 EMLSKGISPTVYTFGVVMKALC----------LVNEVDSACALLKDMTRHGCVPNAIVYQ 274
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
++H S+ + L L M G P V T+ + LC RI +A +L+ M+
Sbjct: 275 TLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLR 334
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G +P++ TY + A L ++ PN+ +N LI +++ R+D
Sbjct: 335 GFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-----PNVVLFNTLINGYVSRGRLDE 389
Query: 209 VREIWNHVKGS-ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ + + S G D+ +Y LI GLC+K A + EM KG P +T+ L
Sbjct: 390 AKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILI 449
Query: 268 RGLIQSDMLRTWRRLKKKLDEES 290
+ L R + LDE S
Sbjct: 450 DRFCKEGRLEEARNV---LDEMS 469
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 37/233 (15%)
Query: 68 AEKVFDEMR-VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++ +MR V EP S+++VL V + P++ + M KGI PTV T+ V+
Sbjct: 183 ATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVM 242
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
K LC ++ A LL +M R+G C
Sbjct: 243 KALCLVNEVDSACALLKDMTRHG------------------------------------C 266
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VPN Y LI + R++ V ++ + D++++ IHGLC+ + EA +
Sbjct: 267 VPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAK 326
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
M+ +G P T+ L GL + + R L K+ ++ + N
Sbjct: 327 LVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLIN 379
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 70/160 (43%), Gaps = 2/160 (1%)
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
+KG C Y ++ L + G + + LL +M + G+ + K Y GR
Sbjct: 122 QKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHY-GRAGLP 180
Query: 172 G-AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
G A +L M+ C P +YN+++ + +A N +V ++ + + + ++ +
Sbjct: 181 GQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGV 240
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ LC + AC +M G +P + ++TL L
Sbjct: 241 VMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHAL 280
>gi|195655361|gb|ACG47148.1| ATP binding protein [Zea mays]
Length = 551
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 14/257 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + Y++L +GWC+ A + L EMI+ P TY + C
Sbjct: 250 NAETYSTLFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAIESFCSAG--------- 300
Query: 63 KTIRNAEKVFDEMRVRGI---EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ A ++F+ MR G+ P ++SI++ ++A + + + L+ M+ G P V
Sbjct: 301 -LVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELLSDMRTCGCMPDV 359
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY +++ +C GR++ A +L EM R G P TYNCF ++A+ A++L +
Sbjct: 360 TTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLRNADDALELCER 419
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E C P++HTYN+L+ MF + +IW + +D+Y ++I+GL +
Sbjct: 420 MIEAH-CEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRAIDTYEIMIYGLFDCG 478
Query: 240 KWKEACQYFVEMIEKGL 256
+ + A E+I + +
Sbjct: 479 ETEYATALLDEVINRDM 495
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 16/185 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V Y LI G C + R+D A R L EM G P++VTYN LN +C
Sbjct: 356 MPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLC---------- 405
Query: 61 FEKTIRNAEKVF---DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
++RNA+ + M EP V ++++++ ++ + +LD M ++G
Sbjct: 406 ---SLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQR 462
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ TY ++ L CG E A LL E++ + S + ++ + +L
Sbjct: 463 AIDTYEIMIYGLFDCGETEYATALLDEVINRDMKLSYKKFDAIMLRLSAVGNLGAIHRLS 522
Query: 178 RQMKE 182
M++
Sbjct: 523 EHMRK 527
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 47/200 (23%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P K Y+ +I K +R++ L +M G P+V TY L+ G+C L
Sbjct: 322 PTAKTYSIMIVALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMCLVGRLD----- 376
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +V DEM G PD+ +++ L+V
Sbjct: 377 -----AAYRVLDEMGRAGFPPDIVTYNCFLNV---------------------------- 403
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
LCS +DA EL M+ PS TYN + +A+ A+ ++ +M
Sbjct: 404 -------LCSLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMD 456
Query: 182 EDDLCVPNIHTYNILI-GMF 200
+ C I TY I+I G+F
Sbjct: 457 KRG-CQRAIDTYEIMIYGLF 475
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P ++ C CG +++AE + G + R + +AETY+ F + +D AMK+
Sbjct: 215 PETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLG-NAETYSTLFFGWCRARDPKKAMKV 273
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD---LDSYTMLIH 233
+M + P TY I F + + RE++ ++ L + +Y+++I
Sbjct: 274 LEEMIQMKH-TPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIV 332
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
L + + +E + +M G +P T++ L G+
Sbjct: 333 ALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGM 369
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
P N+L+ F + ++ VK LG + ++Y+ L G C + K+A +
Sbjct: 215 PETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLG-NAETYSTLFFGWCRARDPKKAMKV 273
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
EMI+ P+ T+ + ++ R L + + E +T S
Sbjct: 274 LEEMIQMKHTPESFTYVAAIESFCSAGLVSEARELFEFMRTEGLTVSS 321
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 143/306 (46%), Gaps = 26/306 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + L++ CK ++I+ A+ GE+ +RG+ P VV++N L+NG C+ +L R
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL 282
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E + +A K+F EM RG+ P+ +F+ +++ +
Sbjct: 283 KRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ L ++ M KG+ P V TY +++ LC G + +A++L+ EM + G+ P T
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y D A+++ ++M ++ + + N+ + LI F ++ +
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNV-AFTALISGFCREGQVIEAERTLREM 461
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + D +YTM+IHG C+K K + EM G +P VT+ L GL + +
Sbjct: 462 LEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQM 521
Query: 277 RTWRRL 282
+ L
Sbjct: 522 KNANML 527
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 126/273 (46%), Gaps = 46/273 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +T+LI G C R D+ +M+ +GV+P+V+TYN L+NG+C+ L
Sbjct: 327 VPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDL----- 381
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
R A+K+ EM RG++PD ++++++ + + +L+ M ++GI
Sbjct: 382 -----REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNV 436
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+T+++ C G++ +AE L EM+ G+ P TY + + D KL ++M
Sbjct: 437 AFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM 496
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ D VP + TYN+ L++GLC++ +
Sbjct: 497 QCDGH-VPGVVTYNV-----------------------------------LLNGLCKQGQ 520
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
K A M+ G++P +T+ L +Q+
Sbjct: 521 MKNANMLLDAMLNLGVVPDDITYNILLERTLQA 553
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 11/276 (3%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75
K+N A F E+++ G P+V +NVL++ +C+ E I A+ +F E+
Sbjct: 202 KLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCK----------EHKINEAQLLFGEI 251
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
RG+ P V SF+ +++ Y ++ FM E + P V TY+ ++ LC G++
Sbjct: 252 GKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQL 311
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
+DA +L EM G+ P+ T+ + A+ M++Y+QM + P++ TYN
Sbjct: 312 DDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGV-KPDVITYNT 370
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
LI + + +++ + L D +YTMLI G C++ + A + EM+++G
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430
Query: 256 LLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ V F L G + + R +++ E I
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 144/296 (48%), Gaps = 46/296 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YTSLI CK + A + + E+++ G++ NVVTY LL+G+C
Sbjct: 194 PNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE---------- 243
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ AE+VF M G+ P+ +++ ++H + +A + + + D L MKEK I P +
Sbjct: 244 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLL 303
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC+ R+E+A+ L+GE+ +G++ +A Y Y A A+ L +M
Sbjct: 304 YGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML 363
Query: 182 E--DDLC--------------------VPNIHTYNILIGMFM-------ALNRMDMVREI 212
+ D LC +P+ Y LI M ALN D + EI
Sbjct: 364 DLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEI 423
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
G E LDL +YT LI GL + ++A EMI KG+LP +V + L +
Sbjct: 424 -----GME--LDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK 472
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 139/290 (47%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + +L++ K+ R D++ +F +M G++ +V TYN++++ +C+ L
Sbjct: 19 PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEM---- 74
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F +M+ G PD+ +++ ++ + + + MK+ P V T
Sbjct: 75 ------ARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVIT 128
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C C R+ A E L EM NG+ P+ TY+ F + A+K + M+
Sbjct: 129 YNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMR 188
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L PN TY LI + ++ + + + L++ +YT L+ GLCE+ +
Sbjct: 189 RVAL-TPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRM 247
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
KEA + F M+ G+ P + T+ L G I++ + + + K++ E+ I
Sbjct: 248 KEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 297
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 150/311 (48%), Gaps = 36/311 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI +CK R+ A FL EM G++PNVVTY+ ++ C+
Sbjct: 124 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCK---------- 173
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ A K F +MR + P+ +++ ++ +A +L + + + GI V T
Sbjct: 174 EGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVT 233
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC GR+++AEE+ M+ GV+P+ ETY + K+ A + ++MK
Sbjct: 234 YTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMK 293
Query: 182 EDDLCV-PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM---------- 230
E C+ P++ Y ++ +R++ + + +K S + + YT
Sbjct: 294 EK--CIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQ 351
Query: 231 -------------LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
L+ GLC+ ++ A + F EM++KG++P K+ + L G ++ L+
Sbjct: 352 ATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQ 411
Query: 278 TWRRLKKKLDE 288
L+ ++ E
Sbjct: 412 EALNLRDRMIE 422
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 135/289 (46%), Gaps = 11/289 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +I CK ++MA +M E G P++VTYN L++G + L
Sbjct: 55 SVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLD------ 108
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+F++M+ +PDV +++ +++ + + + + + L+ MK G+ P V TY
Sbjct: 109 ----ECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTY 164
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ + C G +++A + +M R ++P+ TY + A+KL ++ +
Sbjct: 165 STFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQ 224
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ + N+ TY L+ RM E++ + + + + ++YT L+HG + ++ +
Sbjct: 225 AGIKL-NVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 283
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A EM EK + P + + T+ GL L + L ++ E I
Sbjct: 284 YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGI 332
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 1/202 (0%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ A + F +MR + P S + +LH S+ + LS M GI +V TY
Sbjct: 2 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ LC G +E A L +M G +P TYN + + + ++ QMK+ D
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
C P++ TYN LI F RM E + +K + L ++ +Y+ I C++ +EA
Sbjct: 122 -CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180
Query: 245 CQYFVEMIEKGLLPQKVTFETL 266
++FV+M L P + T+ +L
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSL 202
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 28/215 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
P++ +Y ++++G C +R++ A+ +GE+ E G+ N V Y L++ +
Sbjct: 299 PDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTL 358
Query: 54 ---------SLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL 104
L N FE A+K+FDEM +G+ PD +++ ++ + Q +L
Sbjct: 359 LEEMLDLVDGLCKNNCFEV----AKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEAL 414
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
+ + M E G+ + YT+++ L G+++ A LL EM+ GV P Y C K+Y
Sbjct: 415 NLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKY 474
Query: 165 RGRKDANGAMKLYRQMKE-------DDLCVPNIHT 192
+ A++L +M + D VP++ T
Sbjct: 475 YALGKVDEALELQNEMAKRGMITGLSDHAVPSVQT 509
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ YT+LI G K + A MIE G+E ++ Y L+ G+
Sbjct: 391 MPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQ------ 444
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A + DEM +G+ PD + ++ Y K +L+ N M ++G+ ++
Sbjct: 445 ----VQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLS 500
Query: 121 TYT 123
+
Sbjct: 501 DHA 503
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 141/317 (44%), Gaps = 31/317 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PNV YT+LI G CK R A + + M+ G EP++VTYN L++G+C
Sbjct: 43 PNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLV 102
Query: 52 -----RASLHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSF--SIVLHVY 94
R PN T + A + EM +RG ++ + I
Sbjct: 103 LQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCE 162
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+R + + M E G P V TY + + LC G+++ E+L EM R G+ P
Sbjct: 163 ARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDV 222
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
T+ + A ++++ M E CVP+ TY+I++ NR+D V E+
Sbjct: 223 VTFCSIISGLCKANRIDDAFQVFKGMLERG-CVPDSLTYSIMLDNLSRANRLDTVDEVLE 281
Query: 215 HVKGSELGLDLDSYT--MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
H++ + G ++ YT I LC K+ A + MIE G LP +++ + GL +
Sbjct: 282 HMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCK 341
Query: 273 S-DMLRTWRRLKKKLDE 288
S ++ W+ +K LD
Sbjct: 342 SGNVDDAWKLSRKMLDS 358
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 13/278 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y + I G CK ++D L EM G+ P+VVT+ +++G+C+
Sbjct: 184 IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCK--------- 234
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK--EKGICPT 118
I +A +VF M RG PD ++SI+L SRA++ + L M+ + G
Sbjct: 235 -ANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVME 293
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V T+ + + LC G+ A+ +L M+ +G P+ +YN + + A KL R
Sbjct: 294 VYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSR 353
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-DLDSYTMLIHGLCE 237
+M + C P++ +N LI F R+ ++ +K + + D+ +Y LI G +
Sbjct: 354 KMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSK 413
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
K+A EM G P VT+ L G + M
Sbjct: 414 FGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGM 451
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 132/281 (46%), Gaps = 19/281 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V YT+LI G CK +D A+ L +M + G PNVVTY L++G+C+ H
Sbjct: 9 SVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPH------ 62
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A + M G EPD+ +++ ++H A++ + L + G P TY
Sbjct: 63 ----DAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITY 118
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY-NCFFKEYRGRKDANGAMKLYRQMK 181
+++V C R++ A L+ EM+ G + Y +C F G +A Y
Sbjct: 119 STLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIF----GFCEARCQSSRYECRD 174
Query: 182 EDDLC----VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
D++ +P++ TYN I ++D E+ + + D+ ++ +I GLC+
Sbjct: 175 GDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCK 234
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
+ +A Q F M+E+G +P +T+ + L +++ L T
Sbjct: 235 ANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDT 275
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 136/293 (46%), Gaps = 14/293 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGV-EPNVVTYNVLLNGVCRRASLHPNE 59
+PN+ Y +I G CK +D A + +M++ G +P+V+ +N L++G C+ L
Sbjct: 326 LPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLS--- 382
Query: 60 RFEKTIRNAEKVFDEMRVRGI-EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
A ++ EM+ + I PDV +++ ++ S+ + + L M+ G P
Sbjct: 383 -------QAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPN 435
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V TY +++ G E+AE L EM G P TYN + + A +Y+
Sbjct: 436 VVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQ 495
Query: 179 QMK-EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
Q+K + C P+ TY ILI + + + + D +Y +LI L E
Sbjct: 496 QLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAE 555
Query: 238 KQKW-KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++ +A + +M+++ +P F +L R +++ + + R + ++++E+
Sbjct: 556 TEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEK 608
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 127/268 (47%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+L++G+ + + EM GVEPN+ TYN L+ CR F
Sbjct: 71 PNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGE------F 124
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A +FDEM VRGI +V S++ ++ R K + L+ M+ +G P++ T
Sbjct: 125 ER----ARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIIT 180
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V G++ +A +M G PSA TYN + +D A + MK
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L P TY ILI F N M EI ++ + L +D +Y +L+ LC +
Sbjct: 241 ERGL-EPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNM 299
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
K+A + F M EKG+ P V ++ + G
Sbjct: 300 KDARKLFQSMGEKGVEPSNVIYDMMIYG 327
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 125/275 (45%), Gaps = 15/275 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y LI WC+ + A EM RG+ NVV+YN L+ G+CR L
Sbjct: 106 PNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLW----- 160
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+ D MR G P + +F++++ Y +A K +L N MK G P+ T
Sbjct: 161 -----DAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVT 215
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C + A L +M G+ P+ TY + A ++ M+
Sbjct: 216 YNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGME 275
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEKQ 239
+ L V + HTY +L+ M R+++ + E G++ + Y M+I+G +
Sbjct: 276 KAGLEV-DAHTYGVLVRALCMEGNMKDARKLFQSM--GEKGVEPSNVIYDMMIYGYGREG 332
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+A + +EM +KGL+P ++ R L + D
Sbjct: 333 SSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDD 367
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 11/289 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V T+L+ G CK + A R EM G+ PN VTY L++G + + E
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHG------YFTHGQRE 90
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K +F+EMR G+EP++ +++ ++ + R + + + + M +GI V +Y
Sbjct: 91 KGF----ALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSY 146
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC G++ DA +LL M G PS T+N Y + A+ + QMK
Sbjct: 147 NTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKA 206
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P+ TYN+LI F M + +K L +YT+LI +
Sbjct: 207 AGF-QPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMG 265
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+A + M + GL T+ L R L ++ R+L + + E+ +
Sbjct: 266 KAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGV 314
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 25/177 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+ Y LI G+C+ + A R L +M ERG+EP VTY +L++ R
Sbjct: 211 PSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEI 270
Query: 52 -----RASLHPNER----------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+A L + E +++A K+F M +G+EP + ++++ Y R
Sbjct: 271 LAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGR 330
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+L + M++KG+ P A+Y ++ LC + ++AE LL +MVR G+ S
Sbjct: 331 EGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTS 387
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 144/298 (48%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT++I G+ K +D A EM++RG+ PNVVTY+ ++ +C+
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCK---------- 246
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A +V M G+ P+ +++ ++H Y + +P+ ++ L M G+ P V T
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR +A ++ M + G+ P TY + Y + L M
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN + ++ILI + ++D +++ ++ L D +Y +I LC+ +
Sbjct: 367 RNGI-HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
++A +YF +MI++ L P + + +L L D + L ++ + I + F N
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 143/310 (46%), Gaps = 58/310 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPN + Y S+++G+C + A FL +M GVEP+VVTYN L++ +C+ N R
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK------NGR 319
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTS---------------------------------- 86
+ A K+FD M RG++P++T+
Sbjct: 320 CTE----ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375
Query: 87 -FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
FSI++ Y++ K ++ + M+++G+ P TY +V+ LC GR+EDA +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 146 VRNGVSPSAETYN------CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
+ +SP YN C F ++ + A +L +M + +C+ I +N +I
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKW------DKAKELILEMLDRGICLDTIF-FNSIIDS 488
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
R+ ++++ + + D+ +Y+ LI G C K EA + M+ G+ P
Sbjct: 489 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548
Query: 260 KVTFETLYRG 269
VT+ TL G
Sbjct: 549 CVTYNTLING 558
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 130/266 (48%), Gaps = 11/266 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y+S+I CK +D A L M++ GV PN TYN +++G C +S P E
Sbjct: 231 LPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC--SSGQPKE- 287
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +M G+EPDV +++ ++ + + + + M ++G+ P +
Sbjct: 288 -------AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++++ + G + + LL MVRNG+ P+ ++ Y + + AM ++ +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L P+ TY +IG+ R++ + + L Y LIH LC K
Sbjct: 401 RQQGL-NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
W +A + +EM+++G+ + F ++
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSI 485
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 139/298 (46%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +Y SLI+ C ++ D A+ + EM++RG+ + + +N +++ C+
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK---------- 491
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +EK+FD M G++PD+ ++S ++ Y A K + L M G+ P T
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R+EDA L EM +GVSP TYN + + A +LY +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + + TYNI++ N D ++ ++ ++L L+ ++ ++I L + +
Sbjct: 612 ESGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
EA F + GL+P T+ + LI+ +L L ++E T S N
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 728
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 19/297 (6%)
Query: 7 YTSLIYGWCKINRI-DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+T L+ G C R D + L M + G PNV +YN+LL G+C E
Sbjct: 129 FTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCD----------ENRS 178
Query: 66 RNAEKVFDEMRVRGIE--PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+ A ++ M G + PDV S++ V++ + + + + M ++GI P V TY+
Sbjct: 179 QEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYS 238
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
S++ LC ++ A E+L MV+NGV P+ TYN Y A+ ++M D
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
+ P++ TYN L+ R R++++ + L ++ +Y L+ G K E
Sbjct: 299 GV-EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357
Query: 244 ACQYFVEMIEKGLLPQKVTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFGS 295
M+ G+ P F L +G + ML + ++ L+ +++T+G+
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 6/215 (2%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG---ICPTVATYT 123
+A VFDE+ RG + + L +R H P ++ + N M G + P + TY
Sbjct: 37 DARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++ C GR++ LG +++ G A + K K + AM + +
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCEKQKW 241
C+PN+ +YNIL+ NR E+ + G + D+ SYT +I+G ++
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+A + EM+++G+LP VT+ ++ L ++ +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 27/281 (9%)
Query: 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
V PN+ TY +L+ C L + + N K +G D +F+ +L
Sbjct: 87 VTPNLCTYGILIGSCCCAGRL---DLGFAALGNVIK-------KGFRVDAIAFTPLLKGL 136
Query: 95 SRAHKPQLSLD-KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG--VS 151
+ ++D L M + G P V +Y ++K LC R ++A ELL M +G
Sbjct: 137 CADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP 196
Query: 152 PSAETY----NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
P +Y N FFKE D + A Y +M + + +PN+ TY+ +I MD
Sbjct: 197 PDVVSYTTVINGFFKE----GDLDKAYGTYHEMLDRGI-LPNVVTYSSIIAALCKAQAMD 251
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
E+ + + + + +Y ++HG C + KEA + +M G+ P VT+ +L
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311
Query: 268 RGLIQSDMLRTWRRL-----KKKLDEESITFGSEFQNYHFK 303
L ++ R++ K+ L E T+G+ Q Y K
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--DDLCVPNIHTY 193
EDA + E++R G S NC + R A+ Y +M D PN+ TY
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADV-ARHSPAAAVSRYNRMARAGADEVTPNLCTY 94
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV-EMI 252
ILIG R+D+ +V +D ++T L+ GLC ++ +A + M
Sbjct: 95 GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154
Query: 253 EKGLLPQKVTFETLYRGL 270
+ G +P ++ L +GL
Sbjct: 155 QLGCIPNVFSYNILLKGL 172
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 134/266 (50%), Gaps = 11/266 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + ++ G K ID A R + E G+ PN+ N L++ +C+
Sbjct: 297 VPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCK--------- 347
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ R AE++F M RG+EP+ +++I++H + +L + M+EKGI TV
Sbjct: 348 -DRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVY 406
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y S++ C A LL EMV G++PSA +Y+ + D AM+L+R+M
Sbjct: 407 PYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREM 466
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + N++T+ LI F MD +++ + S + + ++ ++I G C
Sbjct: 467 ARNGVS-GNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGN 525
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
++A Q + +M+++GL P T+ +L
Sbjct: 526 VRKAFQLYDQMVDRGLTPDNYTYRSL 551
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 141/299 (47%), Gaps = 18/299 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ +LI CK R AER M RG+EPN VTY +L++ +C+R +
Sbjct: 332 VPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMD---- 387
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A +FD MR +GI V ++ +++ Y + + LN M EKG+ P+ A
Sbjct: 388 ------DALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAA 441
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y+ ++ LC G + A EL EM RNGVS + T+ + + + A +L+ +M
Sbjct: 442 SYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKM 501
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + VPN T+N++I + + + ++++ + L D +Y LI LC
Sbjct: 502 IDSSV-VPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLG 560
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML----RTWRRLKK---KLDEESIT 292
+A ++ ++ ++ + TL G + L W ++ KLD S T
Sbjct: 561 AMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFT 619
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 125/261 (47%), Gaps = 12/261 (4%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRN 67
T+L+YG+CK R+ EM RGV+ +++++ V++ + LH E+
Sbjct: 584 TTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALK---LHDGEKISV---- 636
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
+F EM+ +G++PD + ++ V+S+ +L+ + M G P V TYT ++
Sbjct: 637 ---LFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLIN 693
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
LC G + A+ L EM+ P++ TYNCF + A L+ + E C+
Sbjct: 694 HLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEG--CL 751
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
N T+N LI F ++ ++ + S D SY+ +I+ LC+ +A Q
Sbjct: 752 ANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQL 811
Query: 248 FVEMIEKGLLPQKVTFETLYR 268
+ EM+ KGL P V + L R
Sbjct: 812 WNEMLYKGLKPDIVAYNILIR 832
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 134/287 (46%), Gaps = 11/287 (3%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
+YT+ I +C+I +D A L M +GV+ + V YNVL+ G+CR N R +
Sbjct: 197 VYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCR------NNR----V 246
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
A +V + M RGI D ++ +++ + R + +++L+ + M P+VA+ + +
Sbjct: 247 LEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFM 306
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
V L G I+ A L + G+ P+ N + + A +L+R M L
Sbjct: 307 VDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGL 366
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
PN TY ILI MD +++ ++ + + + Y LI+G C+ + +A
Sbjct: 367 -EPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQAR 425
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EM+EKGL P ++ L GL + L + L +++ ++
Sbjct: 426 GLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVS 472
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 11/286 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y L+YG C+ NR+ A M+ERG+ + VTY L+ G CR L
Sbjct: 233 YNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEM--------- 283
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++ D+M P V S S ++ + + + E G+ P + +++
Sbjct: 284 -ALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALI 342
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC R +AE L M G+ P+ TY R + A+ ++ +M+E +
Sbjct: 343 DKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIR 402
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
V ++ YN LI + + R + N + L SY+ LI GLC K A +
Sbjct: 403 V-TVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAME 461
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EM G+ TF TL G + + RL K+ + S+
Sbjct: 462 LHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVV 507
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 11/179 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT LI CK + A+ EM+ PN TYN L+ + L +
Sbjct: 683 PNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVL 742
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
TI + G + +F+ ++ + +A + Q ++D + E G P +
Sbjct: 743 HATI-----------LEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCIS 791
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y++++ LC G I A +L EM+ G+ P YN + + + + +Y M
Sbjct: 792 YSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDM 850
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ N + +LI G+CK +I A + E G P+ ++Y+ ++N +C+
Sbjct: 751 LANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGD------ 804
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
I A ++++EM +G++PD+ +++I++
Sbjct: 805 ----INKAFQLWNEMLYKGLKPDIVAYNILI 831
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 77/211 (36%), Gaps = 47/211 (22%)
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Y R + + + D L GI T + ++ L + A +L EMV+
Sbjct: 135 YLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLD 194
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
Y + Y ++ +GA L +M+
Sbjct: 195 EYVYTAGIRAYCEIRNLDGARGLLTRMESKG----------------------------- 225
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
VKGS + Y +L++GLC + EA + M+E+G++ +VT+ TL G ++
Sbjct: 226 --VKGSAV-----PYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRT 278
Query: 274 DMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
+ L E ++ + + HF P
Sbjct: 279 EEL-----------EMALEMTDDMLSLHFVP 298
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 142/295 (48%), Gaps = 17/295 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + S+I G CK +++ AE + MIE+GV+P+V+TYN++++G R
Sbjct: 281 PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQ------- 333
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++FD M + IEP++ S++I+++ Y+R K ++ + +KG+ P++ T
Sbjct: 334 ---VDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVT 390
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
++ L GR + A+ EM+ G P T+ Y AM + ++
Sbjct: 391 CNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLE 450
Query: 181 --KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ED NI Y +I ++D + + L D+ +YT +I G C++
Sbjct: 451 RRRED----TNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE 506
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
EA +M + G L T+ + RG ++S+ + + +++ +S +F
Sbjct: 507 GLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSF 561
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 138/294 (46%), Gaps = 15/294 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN MY +++ G CK A L M + +PN Y+++++ C+ L
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLD----- 230
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +EM+ + I PD+ ++S ++ + + + M I P V T
Sbjct: 231 -----GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCT 285
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ SV+ LC G++EDAEE++ M+ GV P TYN Y R + A +++ M
Sbjct: 286 FNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMI 345
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PNI +YNILI + ++D ++ + L + + +L+HGL E +
Sbjct: 346 NKSI-EPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRT 404
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM----LRTWRRLKKKLDEESI 291
K A +F EM+ G +P T TL G ++ + + + +L+++ ++ +I
Sbjct: 405 KSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNI 458
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 132/274 (48%), Gaps = 18/274 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGV-EPNVVTYNVLLNGVCRRASLHPNERF 61
N ++ +L+ G N++ A +++ + EPN V Y ++NG+C++
Sbjct: 141 NQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKG-------- 192
Query: 62 EKTIRNAEKVFDEMRVR---GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ +K FD +R+ +P+ +SIV+ + + + LN MK+K I P
Sbjct: 193 -----HTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPD 247
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ TY++++ LC + E+ L EM+ + P+ T+N A ++ R
Sbjct: 248 IFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMR 307
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M E + P++ TYN++I + ++D REI++ + + ++ SY +LI+G +
Sbjct: 308 YMIEKGV-DPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQ 366
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+K EA Q E+ +KGL P VT L GL +
Sbjct: 367 KKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFE 400
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 146/322 (45%), Gaps = 46/322 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +Y+ +I +CK +D A L EM ++ + P++ TY+ L++ +C+ +
Sbjct: 211 PNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQW------ 264
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
N +F EM I P+V +F+ V+ + K + + + + +M EKG+ P V T
Sbjct: 265 ----ENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVIT 320
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ G+++ A E+ M+ + P+ +YN Y +K + AM++ R++
Sbjct: 321 YNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREIS 380
Query: 182 EDDLCVPNIHTYNILI-GMF------MALNRMD-------------------------MV 209
+ L P+I T N+L+ G+F A N D +V
Sbjct: 381 QKGL-KPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLV 439
Query: 210 REIWNHVKGSEL---GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
E +H E ++ YT +I GLC+ K +A F ++ GL P +T+ +
Sbjct: 440 EEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAM 499
Query: 267 YRGLIQSDMLRTWRRLKKKLDE 288
G Q +L + + +K+++
Sbjct: 500 ISGYCQEGLLDEAKDMLRKMED 521
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 116/262 (44%), Gaps = 28/262 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNG------------V 49
P+V Y +I G+ ++D A MI + +EPN+++YN+L+NG V
Sbjct: 316 PDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQV 375
Query: 50 CRRAS--------------LHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
CR S LH +T ++A+ FDEM G PD+ + +L Y
Sbjct: 376 CREISQKGLKPSIVTCNVLLHGLFELGRT-KSAQNFFDEMLSAGHIPDLYTHCTLLGGYF 434
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + ++ + ++ + + YT+V+ LC G+++ A ++ G+ P
Sbjct: 435 KNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVI 494
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TY Y + A + R+M ED+ C+ + TYN+++ F+ N++ ++
Sbjct: 495 TYTAMISGYCQEGLLDEAKDMLRKM-EDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEE 553
Query: 216 VKGSELGLDLDSYTMLIHGLCE 237
+ G + + +L+ + E
Sbjct: 554 IAGKSFSFEAATVELLMDIIAE 575
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 121/290 (41%), Gaps = 17/290 (5%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+D A +M+ P+VV+++ LL +A +H K + +F E+
Sbjct: 53 LDDAFSLFRQMVRTKPLPSVVSFSKLL-----KALVH-----MKHYSSVVSLFREIHKLR 102
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
I SIV++ H+ L L +KGI + ++++ L + +++DA
Sbjct: 103 IPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAV 162
Query: 140 ELLGEMVRNGV-SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L ++VR + P+ Y + A L R M++ PN Y+I+I
Sbjct: 163 HLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGS-TKPNTCIYSIVID 221
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
F +D + N +K + D+ +Y+ LI LC+ +W+ F+EMI + P
Sbjct: 222 AFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYP 281
Query: 259 QKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGSEFQNYHFK 303
TF ++ GL + + ++K +D + IT+ Y +
Sbjct: 282 NVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLR 331
>gi|242054767|ref|XP_002456529.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
gi|241928504|gb|EES01649.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
Length = 517
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 132/264 (50%), Gaps = 15/264 (5%)
Query: 4 VKMYTSLIYGWCKIN-RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
K + ++ GWC I + A+RF M +G++ +VV+Y +++ + SLH
Sbjct: 240 TKSFNIVLNGWCNIVCSLREAKRFWSSMERKGIDRDVVSYGSMISCFSKAGSLH------ 293
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ K+F+ M G+ PD ++ ++ ++ + + + M+EK + P AT+
Sbjct: 294 ----SVMKLFNHMNEAGVAPDRKVYNAIVFALAKGRCVKAAKMLVRTMEEKQVAPDTATF 349
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S++ LC ++++A E+ M+ G+SPS T++ R + + +Q++
Sbjct: 350 NSLIGPLCKARQVQEAMEMFDAMLERGLSPSVRTFHALLNVARNSTEVFDLLDKMKQLQ- 408
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P + TY +LI F + + V ++W+ + + L D +Y +LIHGL + +
Sbjct: 409 ---CEPEMDTYIMLIRKFCRWRQHESVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLE 465
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
EA +Y+ EM KG P+K T E +
Sbjct: 466 EAAKYYGEMKSKGFSPEKKTEEMI 489
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 134/305 (43%), Gaps = 25/305 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
V + L+ C+ + AE L E+ ++N++LNG C
Sbjct: 205 GVAEFHGLLSALCRYKNVQDAEHLLIS-CEKEFPFETKSFNIVLNGWCNIVC-------- 255
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++R A++ + M +GI+ DV S+ ++ +S+A + N M E G+ P Y
Sbjct: 256 -SLREAKRFWSSMERKGIDRDVVSYGSMISCFSKAGSLHSVMKLFNHMNEAGVAPDRKVY 314
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++V L ++ A+ L+ M V+P T+N + AM+++ M E
Sbjct: 315 NAIVFALAKGRCVKAAKMLVRTMEEKQVAPDTATFNSLIGPLCKARQVQEAMEMFDAMLE 374
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
L P++ T++ L+ + A N + V ++ + +K + ++D+Y MLI C ++ +
Sbjct: 375 RGLS-PSVRTFHALLNV--ARNSTE-VFDLLDKMKQLQCEPEMDTYIMLIRKFCRWRQHE 430
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
+ + M GL P + + L GL L +L+E + +G E ++ F
Sbjct: 431 SVEKLWSAMPANGLSPDRSAYIVLIHGLF----------LNGRLEEAAKYYG-EMKSKGF 479
Query: 303 KPYRR 307
P ++
Sbjct: 480 SPEKK 484
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K+Y ++++ K + A+ + M E+ V P+ T+N L+ +C+
Sbjct: 309 PDRKVYNAIVFALAKGRCVKAAKMLVRTMEEKQVAPDTATFNSLIGPLCK---------- 358
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ ++ A ++FD M RG+ P V +F +L+V A D L+ MK+ P + T
Sbjct: 359 ARQVQEAMEMFDAMLERGLSPSVRTFHALLNV---ARNSTEVFDLLDKMKQLQCEPEMDT 415
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
Y +++ C + E E+L M NG+SP Y
Sbjct: 416 YIMLIRKFCRWRQHESVEKLWSAMPANGLSPDRSAY 451
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 21/175 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + SLI CK ++ A M+ERG+ P+V T++ LLN
Sbjct: 344 PDTATFNSLIGPLCKARQVQEAMEMFDAMLERGLSPSVRTFHALLN-------------- 389
Query: 62 EKTIRNAEKVFD---EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL-NFMKEKGICP 117
RN+ +VFD +M+ EP++ ++ +++ + R + + S++KL + M G+ P
Sbjct: 390 --VARNSTEVFDLLDKMKQLQCEPEMDTYIMLIRKFCRWRQHE-SVEKLWSAMPANGLSP 446
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
+ Y ++ L GR+E+A + GEM G SP +T GR+ A
Sbjct: 447 DRSAYIVLIHGLFLNGRLEEAAKYYGEMKSKGFSPEKKTEEMITAWLEGRELAKA 501
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 16/272 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN ++Y LI G C ++ A RF EM+ R + P +VTYN+L+NG+C++
Sbjct: 529 VPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGK------ 582
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ AE + E+ +G+ DV +++ ++ YS A Q +L+ MK+ GI PT+
Sbjct: 583 ----VMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLN 638
Query: 121 TYTSVVKCLCSCGR--IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
TY ++ CG+ + E++ EM++ + P YN Y D A L+
Sbjct: 639 TYHRLI---AGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHS 695
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M+ + P+ TYN LI RM V+ + N +K L ++Y +LI G C+
Sbjct: 696 AMEAQGI-QPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKL 754
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ + A ++ EM E G P + L GL
Sbjct: 755 KDFDGAYVWYREMFENGFTPSVSICDNLITGL 786
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 133/269 (49%), Gaps = 12/269 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV+ Y +LI G+ + D + L EM ++G++PNV++Y L+N +C+ A+
Sbjct: 459 LPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDAN------ 512
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I AE + +M RG+ P+ +++++ A K + + + M + I PT+
Sbjct: 513 ----ILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLV 568
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC G++ +AE L E+ R G+S TYN Y + A++LY M
Sbjct: 569 TYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETM 628
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K+ + P ++TY+ LI + +V +I+ + L D Y LIH E
Sbjct: 629 KKSGI-KPTLNTYHRLIA-GCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGD 686
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++AC M +G+ P K+T+ L G
Sbjct: 687 VQKACSLHSAMEAQGIQPDKMTYNCLILG 715
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 11/263 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ +++ G+C++ I+ A + +M G+ PN VTYN L+ C K +
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEM----------KNME 444
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
AEK +M +G+ P+V +++ ++ Y R+ L M++KG+ P V +Y ++
Sbjct: 445 EAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLI 504
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
CLC I +AE +LG+MV GV P+A+ YN A + + +M ++
Sbjct: 505 NCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREI- 563
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VP + TYNILI ++ + + + L D+ +Y LI G ++A +
Sbjct: 564 VPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALE 623
Query: 247 YFVEMIEKGLLPQKVTFETLYRG 269
+ M + G+ P T+ L G
Sbjct: 624 LYETMKKSGIKPTLNTYHRLIAG 646
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 11/293 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YT+L G K +D + E + +GV+ T ++LLN +C+
Sbjct: 319 VPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCK--------- 369
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + AE+V + G+ P F+ +++ Y + + + M+ G+ P
Sbjct: 370 -EGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHV 428
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S+VK C +E+AE+ + +MV GV P+ ETYN Y + ++ +M
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM 488
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L PN+ +Y LI + I + + + Y MLI G C K
Sbjct: 489 EKKGL-KPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGK 547
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
K+A ++F EM+ + ++P VT+ L GL + + L ++ + ++F
Sbjct: 548 LKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSF 600
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 135/306 (44%), Gaps = 11/306 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ MY I K+ + A + M GV P V YNV++ G+C+
Sbjct: 180 PDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCK---------- 229
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK +++AEK+FDEM R + P+ +++ ++ Y + + + + + MK + + PT+ T
Sbjct: 230 EKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIIT 289
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++ LC +E+A+ +L EM G P TY F + + + ++ L +
Sbjct: 290 FNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAV 349
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + +T +IL+ M+ E+ + L + +++G C+
Sbjct: 350 RKGVQILD-YTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDI 408
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
+A +M GL P VT+ +L + + + + KK+ E+ + E N
Sbjct: 409 NKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTL 468
Query: 302 FKPYRR 307
Y R
Sbjct: 469 IDGYGR 474
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 129/301 (42%), Gaps = 53/301 (17%)
Query: 2 PNVKMYTSLIYGWCKINRI--DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE 59
P +++ ++ C +++ + AE ++ M + GV P+V + N+ L SL +
Sbjct: 109 PMKPLFSDMLLSICSESKMVSESAELYM-LMKKDGVLPSVASLNLFLE------SLVSTK 161
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
R+E T++ +F E+ G+ PD + + + + +++ + MK G+ P V
Sbjct: 162 RYEDTLQ----LFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGV 217
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y V+ LC R++DAE+L EM+ V+P+ TYN Y A + +
Sbjct: 218 FVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRER 277
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
MK +++ P I T+N L++GLC Q
Sbjct: 278 MKVENV-EPTIITFN-----------------------------------SLLNGLCRAQ 301
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+EA + EM G +P + T+ TL+ G ++ + L EE++ G + +
Sbjct: 302 MMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDA----SITLSEEAVRKGVQILD 357
Query: 300 Y 300
Y
Sbjct: 358 Y 358
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +Y +LI+ + + + A M +G++P+ +TYN L+ G + +H
Sbjct: 668 VPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMH---- 723
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + ++M++RG+ P ++ I++ + + + M E G P+V+
Sbjct: 724 ------KVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVS 777
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+++ L GR DA+ + EM G
Sbjct: 778 ICDNLITGLREEGRSHDADVICSEMNMKG 806
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 144/286 (50%), Gaps = 13/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT L+ G CK R+D A EM+++GV NVVTY VL++G+C+
Sbjct: 332 PNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCK---------- 381
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AE VF M GI + ++ ++H + + +L L+ MK+KG+ V+
Sbjct: 382 EGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSL 441
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY-NCFFKEYRGRKDANGAMKLYRQM 180
Y +++ LC+ ++++A+ LL +M G+ P+ Y N ++ RK++ A+ L ++M
Sbjct: 442 YGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESE-AIALLQKM 500
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ PNI TY L+ +D +N + L ++ +YT L+ GLC+ +
Sbjct: 501 MDSGF-RPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGR 559
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A EMI+KG+ V +L G ++ L+ LK K+
Sbjct: 560 LDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKM 605
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 133/303 (43%), Gaps = 22/303 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y SLI G+ K ++ E+ +GEM G P+VVTYN L+N C+ R
Sbjct: 227 PDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFG------RM 280
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A F EM+ G+ +V +FS + + + + ++ M+ KG+ P T
Sbjct: 281 ER----AYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVT 336
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +V C GR++DA L EMV+ GV + TY A ++R M+
Sbjct: 337 YTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLME 396
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + ++ G F+ N + + + +K + LD+ Y LI GLC QK
Sbjct: 397 RAGIRANELLYTTLIHGHFVYKNS-ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKL 455
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
EA +M E GL P V + + K + + E+I + +
Sbjct: 456 DEAKSLLNKMDECGLKPNNVIYTNIMDAC-----------FKARKESEAIALLQKMMDSG 504
Query: 302 FKP 304
F+P
Sbjct: 505 FRP 507
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 137/274 (50%), Gaps = 15/274 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +L+ +CK R++ A + EM GV NVVT++ ++ C+
Sbjct: 262 PDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNG-------- 313
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+R A K+F +MR++G++P+ +++ ++ +A + +L N M ++G+ V T
Sbjct: 314 --MVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +V LC G++ +AE++ M R G+ + Y + K++ A+ L +MK
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMK 431
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEKQ 239
+ + + ++ Y LI L ++D + + N K E GL ++ YT ++ + +
Sbjct: 432 DKGMEL-DVSLYGALIWGLCNLQKLDEAKSLLN--KMDECGLKPNNVIYTNIMDACFKAR 488
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
K EA +M++ G P VT+ L GL ++
Sbjct: 489 KESEAIALLQKMMDSGFRPNIVTYCALVDGLCKA 522
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 11/240 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
+ E+ PNV T+N++++ +C+ E + A + M+ G PDV +++
Sbjct: 185 LFEQLPAPNVFTFNIMIDFLCK----------EGDLAEARALLARMKAIGCSPDVVTYNS 234
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
++ Y + + + + M+ G P V TY ++V C C GR+E A EM R G
Sbjct: 235 LIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREG 294
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
V + T++ F + AMKL+ QM+ + PN TY L+ R+D
Sbjct: 295 VMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGM-KPNEVTYTCLVDGTCKAGRLDDA 353
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ N + + L++ +YT+L+ GLC++ K EA F M G+ ++ + TL G
Sbjct: 354 LVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHG 413
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 126/288 (43%), Gaps = 13/288 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + +I CK + A L M G P+VVTYN L++G + L
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELE----- 246
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK+ EMR G PDV +++ +++ + + + + + MK +G+ V T
Sbjct: 247 -----EVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVT 301
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++ V C G + +A +L +M G+ P+ TY C + A+ L +M
Sbjct: 302 FSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMV 361
Query: 182 EDDLCVP-NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ VP N+ TY +L+ ++ +++ ++ + + + YT LIHG +
Sbjct: 362 QQG--VPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKN 419
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ A EM +KG+ + L GL L + L K+DE
Sbjct: 420 SERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDE 467
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +L+ G CK ID A +M++ G+EPNV Y L++G+C+ N R
Sbjct: 507 PNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCK------NGRL 560
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK----GICP 117
+K + + DEM +G+ D ++V H Q +L +K K G+
Sbjct: 561 DKAVL----LLDEMIDKGMSLD----NVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQL 612
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ YT V C+ I++A E+L EM+ NG++P A YNC + + + A L
Sbjct: 613 DLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQ 672
Query: 178 RQMKE 182
+M+
Sbjct: 673 NEMES 677
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 94/233 (40%), Gaps = 36/233 (15%)
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC--PTVATYTSVVKCLCSC----GRIEDAE 139
S S++ + + H P L+ ++ + + P + SVV L S G ++DA
Sbjct: 89 SRSLLSRLLAPGHHPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADRGLLDDAV 148
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM----------------KED 183
L + V P+ T N + + A +L+ Q+ KE
Sbjct: 149 LALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPAPNVFTFNIMIDFLCKEG 208
Query: 184 DL--------------CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
DL C P++ TYN LI + ++ V ++ ++G D+ +Y
Sbjct: 209 DLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYN 268
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
L++ C+ + + A YF EM +G++ VTF T ++ M+R +L
Sbjct: 269 ALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKL 321
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 139/283 (49%), Gaps = 11/283 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CK+ + A + L + + V+PNVV YN +++ +C+ K +
Sbjct: 146 YGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKV----------KLVN 195
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++ EM GI PDV ++S ++ + K + ++D N M + I P V T+ +V
Sbjct: 196 EAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 255
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G++++ + + M++ G+ P+ TY Y K N A ++ M + +
Sbjct: 256 DGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVN 315
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+ +YNI+I F + ++D ++ + + ++ +YT LI GLC+ K A +
Sbjct: 316 -PDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALK 374
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
EM ++G+ P +T+ ++ L ++ + L KL ++
Sbjct: 375 LVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQ 417
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 58/318 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV MY ++I CK+ ++ A EM+ G+ P+VVTY+ L++G L
Sbjct: 176 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKL------ 229
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A +F++M + I+PDV +F+I++ + + K + M ++GI P V T
Sbjct: 230 ----KDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVT 285
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ C ++ A + M + GV+P ++YN + K + AM L+++M
Sbjct: 286 YCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMH 345
Query: 182 EDDLCVPNIHTYNILIG-------MFMALNRMDMVRE-----------------IWNH-- 215
++ +PN+ TY LI + AL +D + + NH
Sbjct: 346 CKNI-IPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQV 404
Query: 216 -------------------VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
VKG LD+ +YT++I G C K + EA +M + G
Sbjct: 405 DKAIALLTKLKDQVFEDLFVKGYN--LDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGR 462
Query: 257 LPQKVTFETLYRGLIQSD 274
+P T+E + L + D
Sbjct: 463 IPDAKTYEIIILSLFKKD 480
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 134/286 (46%), Gaps = 6/286 (2%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
LI + ++ + ++ ++++G +PNV+T L+ G+C + S + A
Sbjct: 101 LINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQAR 160
Query: 70 KVFDEMR-VRG--IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+R V G ++P+V ++ ++ + + D + M +GI P V TY++++
Sbjct: 161 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALI 220
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMKEDDL 185
G+++DA +L +M+ + P T+N + + K G MK+
Sbjct: 221 SGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQG-- 278
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
PN+ TY L+ + + +++ I+N + + D SY ++I+G C+ +K EA
Sbjct: 279 IKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAM 338
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
F +M K ++P VT+ +L GL +S + +L ++ + +
Sbjct: 339 NLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGV 384
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK--C--- 128
+M ++GI ++ + +I+++ +S+ + LS + +KG P V T T+++K C
Sbjct: 85 QMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKV 144
Query: 129 --------LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
LC G+ A +LL + V P+ YN K N A LY +M
Sbjct: 145 SYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 204
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P++ TY+ LI F + ++ +++N + + D+ ++ +L+ G C+ K
Sbjct: 205 VSEGIS-PDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 263
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG 269
KE F M+++G+ P VT+ +L G
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVVTYCSLMDG 292
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 86/154 (55%), Gaps = 10/154 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV YTSLI G CK +I A + + EM +RGV P+++TY+ +L+ +C+ N +
Sbjct: 350 IPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCK------NHQ 403
Query: 61 FEKTI----RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
+K I + ++VF+++ V+G DV ++++++ + +L L+ M++ G
Sbjct: 404 VDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRI 463
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
P TY ++ L + AE+LL EM+ G+
Sbjct: 464 PDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 131/287 (45%), Gaps = 11/287 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G+CK +R+D A + L M +RG EP+VVTYN+L+ C R L
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDL---- 199
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +V D++ +P V +++I++ ++ L+ M +G+ P T
Sbjct: 200 ------ALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYT 253
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y VV +C G ++ A E L + +NG TYN ++ KL M
Sbjct: 254 YNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDML 313
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN TY+ LI ++D + + +K L D SY LI LC + K
Sbjct: 314 VKG-CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKV 372
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
A ++ +MI G LP +++ ++ L ++ + +KL E
Sbjct: 373 DLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGE 419
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 132/297 (44%), Gaps = 31/297 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V YT LI ID A + L EM+ RG+ P+ TYNV++NG+C+ L F
Sbjct: 214 PTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEF 273
Query: 62 EKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
I EK+ +M V+G EP+ ++S ++ R
Sbjct: 274 LSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCR 333
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + + L MKEK + P +Y ++ LC G+++ A E L +M+ G P +
Sbjct: 334 DGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILS 393
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN +A+ A+ ++ ++ E C PN +YN L G + D +R + +
Sbjct: 394 YNSILASLCKNGNADEALNIFEKLGEVG-CPPNAGSYNTLFGALWSSG--DKIRALGMIL 450
Query: 217 KGSELGLDLD--SYTMLIHGLCEKQKWKEACQYFVEMIE-KGLLPQKVTFETLYRGL 270
+ G+D D +Y LI LC +A + V+M E + P +++ T+ GL
Sbjct: 451 EMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGL 507
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 130/278 (46%), Gaps = 12/278 (4%)
Query: 15 CKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
CK + D + FL M+ RG +P+V+ L+ G K I A +V +
Sbjct: 88 CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNM----------KKIEKAIQVMEI 137
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
+ G +PDV +++ V+ + +A + + L+ MK++G P V TY ++ C GR
Sbjct: 138 LEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194
++ A ++ +++++ P+ TY + + + AMKL +M L P+ +TYN
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGL-RPDRYTYN 255
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
+++ +D E + + + + +Y +L+ L + KW+ + +M+ K
Sbjct: 256 VVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVK 315
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
G P +T+ TL L + + + + K + E+++
Sbjct: 316 GCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALA 353
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 26/187 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
P+ Y LI C+ ++D+A FL +MI G P++++YN +L +C+ +
Sbjct: 354 PDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNI 413
Query: 57 ----------PNERFEKTIRNA-----EKV-----FDEMRVRGIEPDVTSFSIVLHVYSR 96
PN T+ A +K+ EM GI+PD +++ ++ R
Sbjct: 414 FEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCR 473
Query: 97 AHKPQLSLDKLNFMKEKGIC-PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+++ L M E C PTV +Y +V+ LC RI DA E+L MV G P+
Sbjct: 474 DGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNET 533
Query: 156 TYNCFFK 162
TY +
Sbjct: 534 TYTLLIQ 540
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 2/192 (1%)
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
T+F L+ ++ K SL L M +G P V T ++K + +IE A +++
Sbjct: 78 TNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEI 137
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
+ ++G P YN + + A K+ +MK+ P++ TYNILIG F
Sbjct: 138 LEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGF-EPDVVTYNILIGNFCGRG 195
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
R+D+ + + + + +YT+LI + EA + EM+ +GL P + T+
Sbjct: 196 RLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYN 255
Query: 265 TLYRGLIQSDML 276
+ G+ + ML
Sbjct: 256 VVVNGMCKEGML 267
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV 49
P V Y +++ G CK+ RI A L M+ G PN TY +L+ G+
Sbjct: 495 PTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 148/315 (46%), Gaps = 38/315 (12%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YTSL+ G+ K D A + +M+ G + + TY+VLL +C+ +K +
Sbjct: 509 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCK----------QKKLN 558
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + D+M + G++ ++ +++I++ + K + N M G P+ TYT +
Sbjct: 559 EALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFI 618
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G+IE+AE L+GEM R+GV+P TYN F + A ++M D C
Sbjct: 619 SSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMI-DASC 677
Query: 187 VPNIHTYNILIGMFMALNRMDM----VREIWNHVKGSEL----------GLDLDS--YTM 230
PN TY IL+ F+ ++ +D +WN ++ + GL+ + Y+
Sbjct: 678 EPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSS 737
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+I G C+ + +EAC F M K + P E +Y LI+ KL ++
Sbjct: 738 IIAGFCKATRLEEACVLFDHMRGKDISPN----EEIYTMLIKC-------CCDIKLFGKA 786
Query: 291 ITFGSEFQNYHFKPY 305
++F ++ + F+P+
Sbjct: 787 VSFVTDMIEFGFQPH 801
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 17/288 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+SLIYG + ++ A + +M E G+ P V+TY L+ G C++ F
Sbjct: 402 PNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKK------HEF 455
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ NA ++F+ M G+ PD +++++ H ++ + + + +F+ KG+ T T
Sbjct: 456 D----NAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAE---EAYSFLVRKGVVLTKVT 508
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS+V G + A L+ +MV G + TY+ + +K N A+ + QM
Sbjct: 509 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMT 568
Query: 182 EDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C NI Y I+I + + D + ++N + S +YT+ I C+ +
Sbjct: 569 LSGVKC--NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQ 626
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD-MLRTWRRLKKKLD 287
+EA EM G+ P VT+ G M R + LK+ +D
Sbjct: 627 IEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMID 674
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 12/288 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT LI G C+ + A L M++ G N+ TY +L+ G+C+ +H
Sbjct: 163 YTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIH---------- 212
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +V +EM +RG+ P V +++ ++ Y ++ + + +L M+ G P TY ++
Sbjct: 213 GARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILI 272
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC + ++AEELL + + G +P+ T+ Y + + A+++ M + C
Sbjct: 273 YGLCG-EKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSN-C 330
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
++ Y +LI + + R +E + + + L ++ YT +I G C+ K A +
Sbjct: 331 KLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALE 390
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
F M +G P T+ +L GLIQ L L K+ E+ IT G
Sbjct: 391 VFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPG 438
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 25/295 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----------- 51
N+ YT LI G CK RI A R L EM RGV P+V TYN +++G C+
Sbjct: 194 NLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIK 253
Query: 52 ----RASLHPNERFEKTI---------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
R +P++ + AE++ ++ VRG P V +F+ +++ Y +A
Sbjct: 254 ALMERNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAE 313
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
+ +L M + Y ++ L R ++A+E + EM NG++P+ Y
Sbjct: 314 RIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYT 373
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
Y A++++R M E + C PN TY+ LI + ++ + ++
Sbjct: 374 SIIDGYCKVGKVGAALEVFRLM-EHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQE 432
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + +YT LI G C+K ++ A + F M + GL P + + L L +S
Sbjct: 433 DGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKS 487
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 126/275 (45%), Gaps = 14/275 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V +T++I G+CK RID A R M+ + ++ Y VL+N + ++ RF
Sbjct: 297 PTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKC------RF 350
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A++ EM G+ P+V ++ ++ Y + K +L+ M+ +G P T
Sbjct: 351 ----KEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWT 406
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ L ++ A L+ +M +G++P TY + + + + A +L+ M+
Sbjct: 407 YSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMME 466
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ L P+ YN+L AL + E ++ + + L +YT L+ G +
Sbjct: 467 QNGL-TPDEQAYNVLT---HALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNT 522
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
A +M+ +G T+ L + L + L
Sbjct: 523 DFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKL 557
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 127/314 (40%), Gaps = 67/314 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT I +CKI +I+ AE +GEM GV P+VVTYNV +NG +
Sbjct: 609 PSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYM------ 662
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR-----AHKPQLS-------LDK--- 106
++ +++ D EP+ ++ I+L + + AH S LD
Sbjct: 663 DRAFSTLKRMIDA----SCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQ 718
Query: 107 -LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR 165
L M + G+ PT TY+S++ C R+E+A L M +SP+ E Y K
Sbjct: 719 LLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIK--- 775
Query: 166 GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD- 224
C +I + + DM+ E G
Sbjct: 776 --------------------CCCDIKLFGKAVSFV-----TDMI----------EFGFQP 800
Query: 225 -LDSYTMLIHGLCEKQKWKEACQYFVEMIE-KGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
L+SY LI GLC++ + +A F +++ + +V ++ L GL+++ + +L
Sbjct: 801 HLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQL 860
Query: 283 KKKLDEESITFGSE 296
++ SE
Sbjct: 861 LSAMENRHCQIDSE 874
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 105/253 (41%), Gaps = 41/253 (16%)
Query: 54 SLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK 113
++ R +R A + M + G + S++I++ + +L L M +
Sbjct: 130 AIQAIRRVGGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQD 189
Query: 114 GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGR-KDA 170
G + TYT ++K LC GRI A +L EM GV PS TYN Y GR KDA
Sbjct: 190 GCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDA 249
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILI-GM------------------------------ 199
G + + E + C P+ TYNILI G+
Sbjct: 250 LG----IKALMERNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNI 305
Query: 200 ---FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
+ R+D + + S LDL +Y +LI+ L +K ++KEA + EM GL
Sbjct: 306 INGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGL 365
Query: 257 LPQKVTFETLYRG 269
P V + ++ G
Sbjct: 366 APNVVIYTSIIDG 378
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 11/276 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P + L++ + K+ + D +RF +MI G +P V TYN++++ +C+
Sbjct: 57 FPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCK--------- 107
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A +F+EM+ RG+ PD +++ ++ + + + ++ MK+ P V
Sbjct: 108 -EGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 166
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ C C G++ E EM RNG+ P+ +Y+ + A+K Y M
Sbjct: 167 TYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 226
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L VPN +TY LI + + + + N + + ++ +YT LI GLC +
Sbjct: 227 RRVGL-VPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWEN 285
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
E EM+E + VTF L GL ++ ++
Sbjct: 286 PTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLV 321
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 14/293 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y S+I G+ K+ R+D F EM + EP+V+TYN L+N C+ L
Sbjct: 127 IPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLE 186
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F F EM+ G++P+V S+S ++ + + Q ++ M+ G+ P
Sbjct: 187 F----------FREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 236
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS++ C G + DA L EM++ GV + TY G ++ + L +M
Sbjct: 237 TYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEM 296
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEK 238
E D+ V + T+ +LI + + + + ++ GL ++ YT +I GLC+
Sbjct: 297 VELDIKV-TVVTFCVLIDGLCKNKLVSKAIDYFGRIS-NDFGLQANAAIYTAMIDGLCKG 354
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ + A F +M +KGL+P + + +L G + + L+ K+ E +
Sbjct: 355 NQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGM 407
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 127/290 (43%), Gaps = 10/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI +CK ++ F EM G++PNVV+Y+ L++ C+
Sbjct: 163 PDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCK---------- 212
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ A K + +MR G+ P+ +++ ++ Y + + N M + G+ V T
Sbjct: 213 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVT 272
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ LC + LL EMV + + T+ K + A+ + ++
Sbjct: 273 YTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRIS 332
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D N Y +I N+++ ++ + L D +YT L+ G ++
Sbjct: 333 NDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNV 392
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EA +M+E G+ + + +L GL + L+ R +++ E I
Sbjct: 393 LEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 442
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 47/262 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YTSLI +CKI + A R EM++ GVE NVVTY L++G+C +P E
Sbjct: 232 VPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLC--GWENPTEG 289
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-GICPTV 119
+ DEM I+ V +F +++ + ++D + G+
Sbjct: 290 LH--------LLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANA 341
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
A YT+++ LC ++E A L +M + G+ P Y + + A+ L +
Sbjct: 342 AIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 401
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E + + LDL +YT L+ GL
Sbjct: 402 MVE------------------------------------TGMKLDLLAYTSLVWGLSHCN 425
Query: 240 KWKEACQYFVEMIEKGLLPQKV 261
+ ++A + EMI +G+ P +V
Sbjct: 426 QLQKARSFLEEMIGEGIHPDEV 447
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 1/168 (0%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
MK + P + ++ G+ + + +M+ G P+ TYN D
Sbjct: 51 MKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGD 110
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A L+ +MK L +P+ TYN +I F + R+D + +K D+ +Y
Sbjct: 111 VEAARGLFEEMKFRGL-IPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 169
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
LI+ C+ K + ++F EM GL P V++ TL + M++
Sbjct: 170 ALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQ 217
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 33/222 (14%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV YT+LI G C L EM+E ++ VVT+ VL++G+C+ + +
Sbjct: 269 NVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYF 328
Query: 63 KTIRN--------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
I N A +F++M +G+ PD T+++ ++ +
Sbjct: 329 GRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFK 388
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L + M E G+ + YTS+V L C +++ A L EM+ G+ P
Sbjct: 389 QGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 448
Query: 157 YNCFFKEYRGRKDANGAMKLYRQM-------KEDDLCVPNIH 191
K++ N A++L + ++D +PNI+
Sbjct: 449 CISVLKKHYELGCINEAVELQSYLMKHQLLTSDNDNALPNIY 490
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 133/285 (46%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ G C R + + EM+ G PN+VT++ L+ +CR N F
Sbjct: 215 PDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCR------NGLF 268
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ +V +M G PDV ++ ++ + + +++ LN M G+ P V
Sbjct: 269 ERV----HEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVC 324
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K LCS R E+AE LL EM T+N + +++ QM
Sbjct: 325 YNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQML 384
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C+P++ TY +I F +D + + + SYT+++ GLC ++W
Sbjct: 385 EHG-CMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERW 443
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A + +MI++G P VTF TL L + ++ L K++
Sbjct: 444 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 488
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 126/269 (46%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+MY ++I G CK R+++A L M G+ PNVV YN LL G+C +R+
Sbjct: 285 PDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSA------DRW 338
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ AE + EM + D +F+I++ + ++ L M E G P V T
Sbjct: 339 EE----AEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVIT 394
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+V+ C G I++A LL M G P+ +Y K + A +L QM
Sbjct: 395 YTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMI 454
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C PN T+N LI ++ E+ + + DL SY+ +I GL +
Sbjct: 455 QQG-CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNT 513
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA + M++KG+ P + + ++ L
Sbjct: 514 DEALELLNVMVKKGMSPNTIIYSSIASAL 542
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 122/257 (47%), Gaps = 11/257 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V YT++I G+CK ID A L M G PN V+Y ++L G+C ER
Sbjct: 389 MPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSA------ER 442
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +AE++ +M +G P+ +F+ +++ + + +++ L M G P +
Sbjct: 443 WV----DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 498
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y++V+ L G ++A ELL MV+ G+SP+ Y+ G N ++++ +
Sbjct: 499 SYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENI 558
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+D + YN +I D E ++ S + +YT+LI GL +
Sbjct: 559 -QDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGF 617
Query: 241 WKEACQYFVEMIEKGLL 257
KEA + E+ KG L
Sbjct: 618 VKEAQEILTELCSKGAL 634
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 120/288 (41%), Gaps = 13/288 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y L+ C RI A L +M RG P Y+V L CR +
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGF------ 162
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL-NFMKEKGICPTVA 120
R A V ++ RG DV + ++VL ++ L + + G P V
Sbjct: 163 ----RGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVV 218
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y +V++ LC R ++L+ EMV G P+ T++ +++ QM
Sbjct: 219 SYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQM 278
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E C P++ Y +I R+++ R I N + L ++ Y L+ GLC +
Sbjct: 279 AEHG-CAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADR 337
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKKKLD 287
W+EA EM +K VTF L L Q+ ++ R L++ L+
Sbjct: 338 WEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLE 385
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 2/175 (1%)
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
+ P TY +V+ LC+ GRI DA +L +M R G +P+ Y+ + GA+
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD-MVREIWNHVKGSELGLDLDSYTMLIH 233
+ R + C ++ N+++ +D VR + + + D+ SY ++
Sbjct: 167 GVLRDLHGRG-CALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLR 225
Query: 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
GLC ++W EM+ G P VTF TL L ++ + + ++ E
Sbjct: 226 GLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAE 280
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 146/315 (46%), Gaps = 26/315 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------- 51
+PNV +Y ++I G CK ++ A M ++G+ + VTYN L++G+
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 52 ------RASLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ + PN F E + A ++ EM R + P+V +++ +++ +
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + M KG P V TY +++ C R+ED +L EM G+ A
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
TYN Y N A K++ +M + + P+I TYNIL+ +++ +
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS-PDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
++ SE+ +D+ +Y ++I GLC K KEA F + KG+ P + + T+ GL + +
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Query: 276 LRTWRRLKKKLDEES 290
R +L +++ E+
Sbjct: 480 QREADKLCRRMKEDG 494
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 17/270 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+LI + K + A EMI R V PNV TYN L+NG C L
Sbjct: 252 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG----- 306
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A+ +FD M +G PDV +++ ++ + ++ + + + M +G+ T
Sbjct: 307 -----DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C G++ A+++ MV GVSP TYN A+ + ++
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG-SELGLDLDS--YTMLIHGLCEK 238
+ ++ V +I TYNI+I L R D ++E W + + G+ D+ Y +I GLC K
Sbjct: 422 KSEMDV-DIITYNIII---QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+EA + M E G +P + ++ R
Sbjct: 478 GLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 138/280 (49%), Gaps = 11/280 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+T LI+ +C+ +R+ +A LG+M++ G P++VT LLNG C+ RF++ +
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQ------GNRFQEAV- 169
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ D M G P+V ++ V++ + +L+ M++KGI TY +++
Sbjct: 170 ---SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
L + GR DA LL +MV+ + P+ + + + A LY++M +
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV- 285
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VPN+ TYN LI F + + +++ + D+ +Y LI G C+ ++ ++ +
Sbjct: 286 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 345
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
F EM +GL+ T+ TL G Q+ L +++ ++
Sbjct: 346 LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 13/253 (5%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
+ D A EM++ P++V + +L + + +F+ I ++ +M
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKM------NKFDIVIY----LYHKMENL 108
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI D+ SF+I++H + R + L+L L M + G P++ T S++ C R ++A
Sbjct: 109 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 168
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ M G P+ YN +D N A++++ M++ + + TYN LI
Sbjct: 169 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV-TYNTLIS 227
Query: 199 MFMALNR-MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
R D R + + VK ++ ++ +T LI ++ EA + EMI + ++
Sbjct: 228 GLSNSGRWTDAARLLRDMVK-RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 258 PQKVTFETLYRGL 270
P T+ +L G
Sbjct: 287 PNVFTYNSLINGF 299
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 49/101 (48%)
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+P+I + ++ + +N+ D+V +++ ++ + DL S+T+LIH C + A
Sbjct: 76 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 135
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+M++ G P VT +L G Q + + L +D
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 567
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 149/292 (51%), Gaps = 18/292 (6%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
++ G CKI A L +M++R +EPNVV YN +L+G+C+R + A
Sbjct: 159 IVNGLCKIGDTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRG----------LVGEAL 208
Query: 70 KVFDEMRVRGIEPDVTSFSIVLH-VYSRAHKPQLSLDKLNFM-KEKGICPTVATYTSVVK 127
+F EM V +EP+V +++ ++ + + + N M EKGI P V T++ +V
Sbjct: 209 GLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVN 268
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM-KEDDLC 186
C G + AE ++G M+R GV + TYN Y R A++++ M +E + C
Sbjct: 269 GFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGC 328
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
+P++ TYN LI + + +++ + + + G L D+ ++T LI G E K A +
Sbjct: 329 LPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKE 388
Query: 247 YFVEMIEKGLLPQ----KVTFETLYRGLIQSDMLRTWRRLKKK-LDEESITF 293
F+ M ++G +P V + LY+ + S+ + +R ++K LD + + +
Sbjct: 389 LFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIY 440
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 152/290 (52%), Gaps = 22/290 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V+ ++ L+ G+CK + AE +G MI GVE NVVTYN L++G C R R
Sbjct: 257 VPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLR------NR 310
Query: 61 FEKTIRNAEKVFDEMRVR---GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
E+ +R VFD M VR G P V +++ ++H + + K ++ L+ M KG+ P
Sbjct: 311 MEEAVR----VFDLM-VREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDP 365
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE-YRGRKDANGAMKL 176
V T+TS++ G+ A+EL M G P +T Y+ D+ AM L
Sbjct: 366 DVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSE-AMTL 424
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT--MLIHG 234
+R M++ L + +I YNI++ + +++ R++ + V GL +DSYT ++I G
Sbjct: 425 FRAMEKSGLDL-DIVIYNIMLDGMCKMGKLNDARKLLSFVLVK--GLKIDSYTWNIMIKG 481
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTWRRLK 283
LC + +A + +M E G P K ++ +GL++ D+ R+ + L+
Sbjct: 482 LCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQ 531
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 141/327 (43%), Gaps = 48/327 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y +++ G CK + A EM VEPNVVTYN L+ G+C
Sbjct: 186 PNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVG------- 238
Query: 62 EKTIRNAEKVFDEMRV-RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
R +F+EM +GI PDV +FSI+++ + + + + FM G+ V
Sbjct: 239 --GWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVV 296
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVS--PSAETYNCFFKEYRGRKDANGAMKLYR 178
TY S++ C R+E+A + MVR G PS TYN + K N AM L
Sbjct: 297 TYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLS 356
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNR--------------------------MDMVREI 212
+M L P++ T+ LIG F + + +D + +
Sbjct: 357 EMVGKGL-DPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKC 415
Query: 213 WNHVKGSEL-------GLDLD--SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
W + L GLDLD Y +++ G+C+ K +A + ++ KGL T+
Sbjct: 416 WLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTW 475
Query: 264 ETLYRGLIQSDMLRTWRRLKKKLDEES 290
+ +GL + +L L +K+ E
Sbjct: 476 NIMIKGLCREGLLDDAEELLRKMKENG 502
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 122/252 (48%), Gaps = 14/252 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y SLI+GWCK+ +++ A L EM+ +G++P+V T+ L+ G
Sbjct: 329 LPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGF----------- 377
Query: 61 FE-KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
FE A+++F M+ +G P + + ++VL + ++ M++ G+ +
Sbjct: 378 FEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDI 437
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y ++ +C G++ DA +LL ++ G+ + T+N K + A +L R+
Sbjct: 438 VIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRK 497
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
MKE+ C PN +YN+ + + + R+ +K +D + +LI L +
Sbjct: 498 MKENG-CPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTAELLIRFLSANE 556
Query: 240 KWKEACQYFVEM 251
+ A Q F+++
Sbjct: 557 E-DNAFQEFLQI 567
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 115/259 (44%), Gaps = 34/259 (13%)
Query: 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI------VL 91
+V T N+L+N +C R KT V M G+EP + + + ++
Sbjct: 111 DVCTLNILINCLC---------RLRKTTLGF-AVLGLMTKIGLEPTLVTLNTIANGLCIV 160
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ + +L+ L M ++ + P V Y +++ LC G + +A L EM V
Sbjct: 161 NGLCKIGDTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVE 220
Query: 152 PSAETYNCFFK----EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
P+ TYNC + E G ++ G L+ +M + VP++ T++IL+ F +
Sbjct: 221 PNVVTYNCLIQGLCGEVGGWREGVG---LFNEMVAEKGIVPDVQTFSILVNGFCKEGLLL 277
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE--KGLLPQKVTFET 265
+ + + L++ +Y LI G C + + +EA + F M+ +G LP VT+ +
Sbjct: 278 RAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNS 337
Query: 266 LYRGLIQSDMLRTWRRLKK 284
L G W ++KK
Sbjct: 338 LIHG---------WCKVKK 347
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 26/297 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-----H 56
P+ Y SLI G CK R++ A +M+E G+ PN VTYN L++G C + L +
Sbjct: 295 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 354
Query: 57 PNERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+E +K I A+ + EMR +GI PD +++I+++ YSR
Sbjct: 355 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 414
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D N M KGI PT TYTS++ L R+++A++L +++ GVSP
Sbjct: 415 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 474
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N + + A L ++M + P+ T+N L+ +++ R + + +
Sbjct: 475 FNAMVDGHCANGNVERAFMLLKEMDRKSV-PPDEVTFNTLMQGRCREGKVEEARMLLDEM 533
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
K + D SY LI G + K+A + EM+ G P +T+ L + L ++
Sbjct: 534 KRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 590
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 144/292 (49%), Gaps = 11/292 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P ++ ++ + K+NR++MA EM + V T+N+++N +C+
Sbjct: 189 VPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCK--------- 239
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E ++ A + M G +P+V S++ ++H YS + + L+ M+ KGI P
Sbjct: 240 -EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 298
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S++ +C GR+E+A L +MV G+ P+A TYN Y + D A +M
Sbjct: 299 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 358
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + +P++ TYN+L+ RM ++ ++ + D +Y +LI+G
Sbjct: 359 VKKGI-MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 417
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
K+A EM+ KG+ P VT+ +L L + + ++ L +K+ ++ ++
Sbjct: 418 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVS 469
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V M+ +++ G C ++ A L EM + V P+ VT+N L+ G CR
Sbjct: 470 PDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR---------- 519
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A + DEM+ RGI+PD S++ ++ Y R + + + M G PT+ T
Sbjct: 520 EGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLT 579
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
Y +++KCLC + AEELL EMV G+SP TY
Sbjct: 580 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 615
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 14/242 (5%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A K F M+ +GI P + + + +L ++ + ++ +++ M I TV T+ +V
Sbjct: 176 AFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVN 235
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
LC G+++ A E +G M G P+ +YN Y R + GA ++ M+ +
Sbjct: 236 VLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI-E 294
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKEAC 245
P+ +TY LI R++ +++ K E+GL + +Y LI G C K + A
Sbjct: 295 PDSYTYGSLISGMCKEGRLEEASGLFD--KMVEIGLVPNAVTYNTLIDGYCNKGDLERAF 352
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLI-------QSDMLRTWRRLKKKLDEESITFGSEFQ 298
Y EM++KG++P T+ L L DM++ R KK + ++IT+
Sbjct: 353 SYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR--KKGIIPDAITYNILIN 410
Query: 299 NY 300
Y
Sbjct: 411 GY 412
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P YTSLIY + NR+ A+ +++++GV P+V+ +N +++G C +
Sbjct: 435 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN------- 487
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + EM + + PD +F+ ++ R K + + L+ MK +GI P +
Sbjct: 488 ---VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHIS 544
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ G I+DA + EM+ G +P+ TYN K ++ + A +L ++M
Sbjct: 545 YNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV 604
Query: 182 EDDLCVPNIHTYNILI 197
+ P+ TY LI
Sbjct: 605 NKGIS-PDDSTYLSLI 619
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +L+ G C+ +++ A L EM RG++P+ ++YN L++G RR
Sbjct: 505 PDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGD------- 557
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I++A +V DEM G P + +++ ++ + + L+ + L M KGI P +T
Sbjct: 558 ---IKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDST 614
Query: 122 YTSVVK 127
Y S+++
Sbjct: 615 YLSLIE 620
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV 49
P + Y +LI CK D+AE L EM+ +G+ P+ TY L+ G+
Sbjct: 575 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 140/286 (48%), Gaps = 23/286 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT L++G K R+ A + L EM+ P+ T V++ +C
Sbjct: 147 PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLC----------L 196
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK-----LNFMKEKGIC 116
+ +A ++ +EM RG+ + ++S ++ + + LD+ L + +G
Sbjct: 197 GDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCER----LDEAVALLLGEVTRRGFT 252
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P + TY++V+ LC GR+ DA ++ EM +P+A TYN Y D + A++L
Sbjct: 253 PDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRL 309
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+M +D+ C P++ TY L+ F + R+D E++ + ++L D+ ++T L+ GLC
Sbjct: 310 LGKMVDDN-CAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLC 368
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ + ++A + E+ +G P T+ + G +S+ +R L
Sbjct: 369 GEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEEL 414
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 147/354 (41%), Gaps = 65/354 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------- 51
+P+ T ++ C +R+D A + EM+ RG+ N +TY+ L++G+C+
Sbjct: 181 VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVA 240
Query: 52 -------RASLHPNERFEKTI----------RNAEKVFDEM------------------- 75
R P+ T+ R+A +F+EM
Sbjct: 241 LLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRA 300
Query: 76 -------RVRG------IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
R+ G PDV +++ ++ + + + + + M + P V T+
Sbjct: 301 GDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTF 360
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
TS+V LC GR+EDA ELL E+ R G P+ TYNC Y A +L +
Sbjct: 361 TSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRS 420
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCEKQK 240
VPN TYNIL+ R D + + + +G + Y +++ LC +
Sbjct: 421 RGF-VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGR 479
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
+A Q++ EMI++G +P TF T+ L ++ + L EE I +G
Sbjct: 480 TDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELL----EEMIKYG 529
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERG--VEPNVVTYNVLLNGVCRRASLHPN 58
+PN Y L+ G C+ R D A ++L ++ G +V Y ++L+ +CR
Sbjct: 424 VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCR------- 476
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ +A + ++EM RG P +F+ V+ +AH+PQ + + L M + G P
Sbjct: 477 ---DGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPG 533
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEM 145
T +VV C G I+ A+EL E+
Sbjct: 534 PGTCDAVVSAYCRAGMIQKADELASEL 560
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 110/275 (40%), Gaps = 22/275 (8%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M++ G + T+ V+L G LH + + + DE+R RG+ PD +
Sbjct: 1 MLDAGYPSDSSTFAVVLRG------LHASAKLRHL---GPLLLDEIRDRGLSPDPVELNT 51
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+L A ++ + M E G TY +++ LC +++A LL +M G
Sbjct: 52 ILAELCDARDTTTAMALFDKMAELGAV-NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRG 110
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
++P +N A+ +YRQM +D P+ TY L+ R+
Sbjct: 111 MNPGTLLHNVVIGGLCRAGRLRHALGVYRQM--NDAHPPDFLTYTKLVHGLSKAGRLRDA 168
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ + + D + T+++ LC + +A + EM+ +G+ +T+ L G
Sbjct: 169 VQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 228
Query: 270 LIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
L + ++LDE E F P
Sbjct: 229 LCKC----------ERLDEAVALLLGEVTRRGFTP 253
>gi|297849786|ref|XP_002892774.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338616|gb|EFH69033.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 883
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 137/290 (47%), Gaps = 25/290 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P MY LI WC++N + A +F ++ + + P++ TY +++N CR L
Sbjct: 598 PEKSMYGKLIGAWCRVNNVRKARQFFEILVTKEIIPDLFTYTIMINTYCRLNEL------ 651
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +F +M+ R ++PDV +++++L+ P+L + + M+ + P V
Sbjct: 652 ----KQAYALFQDMKRRDVKPDVVTYTVLLN-----SNPELDVKRE--MEAFDVKPDVVL 700
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ C ++ A L +M R + P TY K N + L R+MK
Sbjct: 701 YTIMINRYCQLNDVKKAYALFKDMKRREIVPDVVTYTVLLKN-------NPELDLTREMK 753
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D+ P++ Y +LI + + + I++ + S + D YT LI G C+
Sbjct: 754 AFDV-KPDVFYYTVLIDWQCKIGDLKEAKGIFDQMIESGVDPDAAPYTALIAGCCKMGNL 812
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
KEA F MIE GL P V++ TL G ++ +R L K++ E+ I
Sbjct: 813 KEAKMIFDLMIESGLKPDFVSYTTLIAGFRRNGFVRKAFTLMKEMLEKGI 862
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 121/295 (41%), Gaps = 61/295 (20%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ YT +I +C++N + A +M R V+P+VVTY VLLN E
Sbjct: 632 IPDLFTYTIMINTYCRLNELKQAYALFQDMKRRDVKPDVVTYTVLLNSNPELDVKREMEA 691
Query: 61 FE------------------KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQL 102
F+ ++ A +F +M+ R I PDV +++++L + P+L
Sbjct: 692 FDVKPDVVLYTIMINRYCQLNDVKKAYALFKDMKRREIVPDVVTYTVLLK-----NNPEL 746
Query: 103 SLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
L + MK + P V YT ++ C G +++A+ + +M+ +GV P A Y
Sbjct: 747 DLTRE--MKAFDVKPDVFYYTVLIDWQCKIGDLKEAKGIFDQMIESGVDPDAAPYTA--- 801
Query: 163 EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222
LI + + + I++ + S L
Sbjct: 802 ---------------------------------LIAGCCKMGNLKEAKMIFDLMIESGLK 828
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
D SYT LI G ++A EM+EKG+ P + + ++ ++ LR
Sbjct: 829 PDFVSYTTLIAGFRRNGFVRKAFTLMKEMLEKGIKPTQASLSAVHYAKSKAKGLR 883
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 116/288 (40%), Gaps = 15/288 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNV----VTYNVLLNGVCRRASLHPNERFE 62
Y + I G C MA L + E + ++ + Y ++ G+C E
Sbjct: 255 YLNFIEGLCLNQMASMAYLLLQPLREVNILVDMSDLGIAYRRVVRGLCN----------E 304
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I +AEK F +M GI+PDV +S ++ + + + D N M EKG
Sbjct: 305 MRIEDAEKAFLDMEEHGIDPDVYVYSAIIEGHRKTMNIPKAFDIFNKMVEKGKRINCVIG 364
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+S+++C C G A +L E + YN F A++L+R+M
Sbjct: 365 SSILQCCCQMGNFSGAYDLFEEFRELNIPLDRVCYNVAFDALGKLGKVEEAIELFREMTG 424
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ P++ Y LIG + ++ + GS D+ Y +L GL +
Sbjct: 425 KGIA-PDVINYTTLIGGCCLQGKCSDAFDLMIEMDGSGKTPDIVIYNVLAGGLARNGLSQ 483
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
EA + M ++G+ P VT + GLI + L + L+ +S
Sbjct: 484 EALETLKLMEDRGVKPTYVTHNMVIEGLIVAGKLDKAEAFYESLEHKS 531
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 130/305 (42%), Gaps = 27/305 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +Y L G + A L M +RGV+P VT+N+++ G+ L E F
Sbjct: 464 PDIVIYNVLAGGLARNGLSQEALETLKLMEDRGVKPTYVTHNMVIEGLIVAGKLDKAEAF 523
Query: 62 EKTIRNAEKVFDEMRVRG----------------IE---PDVTSFSIVLHVYSRAHKPQL 102
+++ + + D V+G +E P F++ + + +
Sbjct: 524 YESLEHKSRENDASMVKGYCEAGCLDQAFERFIRLEFPLPKSVYFTLFTSLCAEKNHISK 583
Query: 103 SLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
+ D L+ M E G+ P + Y ++ C + A + +V + P TY
Sbjct: 584 AQDLLDRMWELGVEPEKSMYGKLIGAWCRVNNVRKARQFFEILVTKEIIPDLFTYTIMIN 643
Query: 163 EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222
Y + A L++ MK D+ P++ TY +L+ + +D+ RE+ + ++
Sbjct: 644 TYCRLNELKQAYALFQDMKRRDV-KPDVVTYTVLLN---SNPELDVKREM----EAFDVK 695
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
D+ YT++I+ C+ K+A F +M + ++P VT+ L + + D+ R +
Sbjct: 696 PDVVLYTIMINRYCQLNDVKKAYALFKDMKRREIVPDVVTYTVLLKNNPELDLTREMKAF 755
Query: 283 KKKLD 287
K D
Sbjct: 756 DVKPD 760
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 18/269 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +Y+++I G K I A +M+E+G N V + +L C+ +
Sbjct: 324 PDVYVYSAIIEGHRKTMNIPKAFDIFNKMVEKGKRINCVIGSSILQCCCQMGNFS----- 378
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F+E R I D +++ + K + +++ M KGI P V
Sbjct: 379 -----GAYDLFEEFRELNIPLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVIN 433
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G+ DA +L+ EM +G +P YN + A++ + M
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGSGKTPDIVIYNVLAGGLARNGLSQEALETLKLM- 492
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
ED P T+N++I + ++D + ++ D ++ G CE
Sbjct: 493 EDRGVKPTYVTHNMVIEGLIVAGKLDKAEAFYESLEHKSREND----ASMVKGYCEAGCL 548
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+A + F+ + + LP+ V F TL+ L
Sbjct: 549 DQAFERFIRL--EFPLPKSVYF-TLFTSL 574
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 128/314 (40%), Gaps = 52/314 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++K L+ R DM E+ G++ + TY +++ +CR ++
Sbjct: 180 PDIKALNFLLNRMIASGRTDMVVGVFWEIERLGLDADAHTYVLVVQALCRNDDKEGVDKL 239
Query: 62 EKTIRNAEK----VFDEMRVRGI-EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
+ N+E VF + G+ + S + +L +P ++ L M + GI
Sbjct: 240 LIRLLNSETRNPCVFYLNFIEGLCLNQMASMAYLL------LQPLREVNILVDMSDLGI- 292
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR----------- 165
Y VV+ LC+ RIEDAE+ +M +G+ P Y+ + +R
Sbjct: 293 ----AYRRVVRGLCNEMRIEDAEKAFLDMEEHGIDPDVYVYSAIIEGHRKTMNIPKAFDI 348
Query: 166 -------GRK-----------------DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
G++ + +GA L+ + +E ++ + + YN+
Sbjct: 349 FNKMVEKGKRINCVIGSSILQCCCQMGNFSGAYDLFEEFRELNIPLDRV-CYNVAFDALG 407
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
L +++ E++ + G + D+ +YT LI G C + K +A +EM G P V
Sbjct: 408 KLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGSGKTPDIV 467
Query: 262 TFETLYRGLIQSDM 275
+ L GL ++ +
Sbjct: 468 IYNVLAGGLARNGL 481
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT++I G CK +D A+ MI++GV PN TY L++G
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKW------ 253
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ ++ EM G++PD ++++L + + + + + + KGI P V
Sbjct: 254 ----KEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTI 309
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ + G + + L MVRNGVSP +N F Y + + AM ++ +M+
Sbjct: 310 YGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMR 369
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L P + Y LI L R+D +N + + D+ ++ L++GLC KW
Sbjct: 370 QQWLS-PGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKW 428
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++A + F E++++G+ F L L + + +RL
Sbjct: 429 EKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRL 469
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y +LI CK+ R+D A +MI GV P++ ++ L+ G+C +++
Sbjct: 375 PGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLC------TVDKW 428
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK AEK+F E+ +GI + F+I++ R + + ++ M + P V +
Sbjct: 429 EK----AEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVIS 484
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V C GRI++A +LL MV G+ P TYN Y + + A L+R+M
Sbjct: 485 YNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREML 544
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L P + TYN ++ + R +E++ ++ + D+ +YT++++GLC
Sbjct: 545 MKGL-TPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFV 603
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
EA + F + K L T + L++
Sbjct: 604 DEAFKMFQSLCSKDLQLDIFTINIMIGALLKG 635
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 139/299 (46%), Gaps = 13/299 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +++SL+YG C +++ + AE+ E++++G+ N +N+L+ +CR
Sbjct: 410 PDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCR---------- 459
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A+++ D M + PDV S++ ++ + + + L+ M G+ P T
Sbjct: 460 EGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFT 519
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C RI+DA L EM+ G++P TYN A +LY M
Sbjct: 520 YNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMI 579
Query: 182 EDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C +I+TY I++ N +D +++ + +L LD+ + ++I L + +
Sbjct: 580 NNRRKC--DIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGR 637
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
++A F + GL+P T+ + LI+ L L ++E S N
Sbjct: 638 KEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLN 696
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 129/300 (43%), Gaps = 14/300 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGV---EPNVVTYNVLLNGVCRRASLHPNE 59
NV Y L+ G C R + A + M + G PNVVTY +++G+C+
Sbjct: 163 NVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCK-------- 214
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ + A+ VF M +G+ P+ +++ ++H Y K + + L M G+ P
Sbjct: 215 --AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDC 272
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y ++ LC GR +A + ++R G+ P Y Y + A M +
Sbjct: 273 VIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGY-ATEGALSEMHSFLD 331
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ + P+ H +NI+ + +D I++ ++ L + +Y LI LC+
Sbjct: 332 LMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLG 391
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ +A F +MI +G+ P F +L GL D +L ++ ++ I + F N
Sbjct: 392 RVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFN 451
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 129/305 (42%), Gaps = 44/305 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +Y L+ CK R A +I +G++P+V Y +LL+G +L F
Sbjct: 270 PDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSF 329
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
D M G+ PD F+I+ + Y++ ++ + M+++ + P V
Sbjct: 330 ----------LDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVN 379
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC-----------------FFKEY 164
Y +++ LC GR++DA +M+ GV+P ++ FF+
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVL 439
Query: 165 RGRKDANGAM------------KLYRQMKEDDLCV-----PNIHTYNILIGMFMALNRMD 207
N A ++ + DL + P++ +YN L+ R+D
Sbjct: 440 DQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRID 499
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
++ + + L D +Y L+HG C+ ++ +A F EM+ KGL P VT+ T+
Sbjct: 500 EAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTIL 559
Query: 268 RGLIQ 272
GL Q
Sbjct: 560 HGLFQ 564
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 104/224 (46%), Gaps = 26/224 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV------CRRASL 55
P+ Y +L++G+CK RID A EM+ +G+ P VVTYN +L+G+ C L
Sbjct: 515 PDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKEL 574
Query: 56 HPN--------ERFEKTI------RN-----AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ N + + TI RN A K+F + + ++ D+ + +I++ +
Sbjct: 575 YLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLK 634
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + ++D + G+ P V TY + + L G +E+ +EL M NG +P++
Sbjct: 635 GGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRM 694
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
N + R D A ++ E + + T ++LI ++
Sbjct: 695 LNALVRWLLHRGDIGRAGVYLSKLDEKNFSL-EASTTSMLISIY 737
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 19/239 (7%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---KPQLSLDKLNFMKEK---GICPT 118
+ +A K+FDEM V +F+ +L V SRA +L + N M + + P+
Sbjct: 32 LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN----GAM 174
TYT ++ C C GR++ G +++ G S + F + +G DA
Sbjct: 92 SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVI--FGQLLKGLCDAKRVDEATD 149
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL---DLDSYTML 231
L R+M E C N+ +YNIL+ R + E+ + + G ++ +YT +
Sbjct: 150 ILLRRMPEFG-CTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTV 208
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
I GLC+ Q A F MI+KG+ P T+ L G + + W+ + + L E S
Sbjct: 209 IDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTG---KWKEVVQMLQEMS 264
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 151/304 (49%), Gaps = 27/304 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR----ASLH- 56
P+V Y+ LI+G+CK ++ + EM +EP++V+Y+ L +G+C++ SL
Sbjct: 358 PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDI 417
Query: 57 ------PNERFEKT--------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
++++T + +A K+ +EM + PD ++F ++H + +
Sbjct: 418 FRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCK 477
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L+ N M E GI P++AT ++ C GR+E+A L+ EM G+ P+ T
Sbjct: 478 MGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFT 537
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + A++L+ M + ++ +P++ Y+ LI F + ++ +
Sbjct: 538 YNAVINRLCKERKSERALELFPLMLKRNV-LPSVVVYSTLIDGFAKQSNSQKALMLYARM 596
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDM 275
+ D+ +YT+LI+ LC + + EA F +M E G+ P K+++ ++ G + DM
Sbjct: 597 LKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDM 656
Query: 276 LRTW 279
+ W
Sbjct: 657 RKAW 660
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 143/301 (47%), Gaps = 11/301 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+ LI G+C +D A + + EM+ + P+ + L++G C+
Sbjct: 433 YSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMG----------LWV 482
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
NA + F+ M GI P + + ++++ + R + + +L+ +N M+ +GI P + TY +V+
Sbjct: 483 NALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVI 542
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC + E A EL M++ V PS Y+ + + ++ A+ LY +M + +
Sbjct: 543 NRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGV- 601
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++ Y ILI + +RM ++ + + + D SYT +I G C ++A
Sbjct: 602 TPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWA 661
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPYR 306
F EM+++G LP VT+ +L G + + + L ++ + IT N +R
Sbjct: 662 LFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHR 721
Query: 307 R 307
R
Sbjct: 722 R 722
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 132/270 (48%), Gaps = 11/270 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y ++I+G CK +D A + L EM G+ P+V TY++L++G C++
Sbjct: 324 NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGD-------- 375
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ + +EM+ +EP + S+S + H + +SLD + G Y
Sbjct: 376 --VEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAY 433
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ ++K C G ++ A +L+ EMVRN ++P + + A++ + M E
Sbjct: 434 SILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLE 493
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ +P+I T N++I R++ + N ++ + +L +Y +I+ LC+++K +
Sbjct: 494 GGI-LPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSE 552
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
A + F M+++ +LP V + TL G +
Sbjct: 553 RALELFPLMLKRNVLPSVVVYSTLIDGFAK 582
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 106/196 (54%), Gaps = 11/196 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +Y++LI G+ K + A M++ GV P++V Y +L+N +C R+ +
Sbjct: 567 LPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMC---- 622
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +F +M G+ PD S++ V+ + R + + N M ++G PTV
Sbjct: 623 ------EAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVV 676
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS+V C RI+ A+ L+ EM R G++P TYN +R R + + A+++ +M
Sbjct: 677 TYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEM 736
Query: 181 KEDDLCVPNIHTYNIL 196
KE+ + +P+ TY +L
Sbjct: 737 KENGV-LPDHMTYMML 751
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 134/280 (47%), Gaps = 12/280 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ +I C+ R++ A + EM +G+ PN+ TYN ++N +C+
Sbjct: 497 LPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCK--------- 547
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ A ++F M R + P V +S ++ +++ Q +L M + G+ P +
Sbjct: 548 -ERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMV 606
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT ++ LC R+ +A L +M NG++P +Y + D A L+ +M
Sbjct: 607 AYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEM 666
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P + TY L+ + +NR+D+ + + +K + D+ +Y +LI +
Sbjct: 667 LQRGH-LPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGN 725
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR 280
+A + EM E G+LP +T+ L L+++ L+T R
Sbjct: 726 LDKALEMLNEMKENGVLPDHMTYMML-EWLLKAKKLKTRR 764
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 5/253 (1%)
Query: 18 NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77
NR + EM G PNV TY +++N C+ + R A ++ +EM
Sbjct: 228 NRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEA----DIDTRQATEILEEMER 283
Query: 78 RGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED 137
G P V ++S ++ R + +LD + + V Y +++ LC G +++
Sbjct: 284 NGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDE 343
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
A ++L EM G+SP TY+ + + D + L +MK ++ P++ +Y+ L
Sbjct: 344 ALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNM-EPSLVSYSSLF 402
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
D+ +I+ + + D +Y++LI G C + A + EM+ L
Sbjct: 403 HGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLA 462
Query: 258 PQKVTFETLYRGL 270
P FE+L G
Sbjct: 463 PDPSNFESLVHGF 475
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 106/222 (47%), Gaps = 7/222 (3%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK------LNFMKEKGICPTVATYTS 124
+F+EM+ G P+V +++I+++ Y + + + +D L M+ G PTV TY++
Sbjct: 236 LFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYST 295
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
+ LC G +E A + + ++ + YN + + + A+K+ +MK
Sbjct: 296 YIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCG 355
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
+ P+++TY+ILI F ++ + +K S + L SY+ L HGLC+K+ +
Sbjct: 356 IS-PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDIS 414
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
F ++ G + + L +G L + +L +++
Sbjct: 415 LDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEM 456
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 7/212 (3%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ NA VF + + G+E S + +L + A++ + MK G P V TYT
Sbjct: 195 LENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTI 254
Query: 125 VVKCLCSCGRIE------DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
++ C E A E+L EM RNG SP+ TY+ + A+ R
Sbjct: 255 MMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVR 314
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ + V N++ YN +I +D ++ +K + D+ +Y++LIHG C++
Sbjct: 315 SLISANGLV-NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQ 373
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ EM + P V++ +L+ GL
Sbjct: 374 GDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGL 405
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 13/196 (6%)
Query: 84 VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLG 143
V F +++ V++ + ++D K+ G+ + + ++KCL R E L
Sbjct: 179 VIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFE 238
Query: 144 EMVRNGVSPSAETYNCFFKEY------RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
EM G P+ TY Y D A ++ +M+ + P + TY+ I
Sbjct: 239 EMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGES-PTVVTYSTYI 297
Query: 198 GMFMALNRMDMVREIWNHVKG--SELGL-DLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
L R+ V + V+ S GL ++ Y +IHGLC+K + EA + EM
Sbjct: 298 ---YGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSC 354
Query: 255 GLLPQKVTFETLYRGL 270
G+ P T+ L G
Sbjct: 355 GISPDVYTYSILIHGF 370
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 122/237 (51%), Gaps = 11/237 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V ++ L+ +CK ++ A+ M+++ V+PN+VTYN L+NG C NE
Sbjct: 277 PTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLV-----NE-- 329
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ AE +F+ M G+ PDV S+SI++ + + ++ M K I P V T
Sbjct: 330 ---VNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVT 386
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GRI A +L+GEM G P+ TYN + A++L ++K
Sbjct: 387 YNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLK 446
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+ ++ P++ TYNILI R+ ++++ V + +D+ +Y +I G C+K
Sbjct: 447 DHNI-QPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKK 502
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 136/288 (47%), Gaps = 25/288 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----RASLHP 57
P+ T+LI G C I A F +++ G + N V+Y L+NG+C+ +A+L
Sbjct: 137 PDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEM 196
Query: 58 NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE---KG 114
R + + + V + G+ D +L D +F E K
Sbjct: 197 LRRIDGKLVRLDVVMYNTIIDGVCKD-----------------KLVNDAFDFYSEMVAKR 239
Query: 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAM 174
ICPTV TY +++ LC G+++DA LL +M+ ++P+ T++ + A
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAK 299
Query: 175 KLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
++ M + D+ PNI TYN L+ + +N ++ I+N + + D+ SY+++I G
Sbjct: 300 NVFVVMMKKDV-KPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISG 358
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
C+ + EA + F EM K + P VT+ +L GL +S + +L
Sbjct: 359 FCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKL 406
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 131/280 (46%), Gaps = 11/280 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V MY ++I G CK ++ A F EM+ + + P VVTYN L+ G+C L
Sbjct: 208 DVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQL------- 260
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++A + +M + I P V +FSI++ + + K + + + M +K + P + TY
Sbjct: 261 ---KDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTY 317
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S++ C + AE + M + GV+P +Y+ + K + AMKL+ +M
Sbjct: 318 NSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHC 377
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ P++ TYN LI R+ ++ + ++ +Y L+ LC+
Sbjct: 378 KQI-FPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVD 436
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+A + ++ + + P T+ L GL +S L+ +++
Sbjct: 437 KAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKV 476
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 141/285 (49%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CK+ + A L + + V +VV YN +++GVC+ +K +
Sbjct: 177 YRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCK----------DKLVN 226
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + EM + I P V +++ ++ + + ++ L+ M + I PTV T++ +V
Sbjct: 227 DAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILV 286
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G++++A+ + M++ V P+ TYN Y + N A ++ M + +
Sbjct: 287 DAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGV- 345
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P++H+Y+I+I F + +D +++ + ++ D+ +Y LI GLC+ + A +
Sbjct: 346 APDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALK 405
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM ++G P +T+ +L L ++ + L KL + +I
Sbjct: 406 LIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNI 450
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 94/231 (40%), Gaps = 36/231 (15%)
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
+M GI ++ + SI+++ +S+ LS + + +KG P T T+++K LC G
Sbjct: 94 QMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKG 153
Query: 134 RIEDAEELLGEMVR--------------NGVSPSAET---------------------YN 158
I A +++ NG+ +T YN
Sbjct: 154 DIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYN 213
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
K N A Y +M +C P + TYN LI + ++ + + +
Sbjct: 214 TIIDGVCKDKLVNDAFDFYSEMVAKRIC-PTVVTYNTLICGLCIMGQLKDAIGLLHKMIL 272
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + ++++L+ C++ K KEA FV M++K + P VT+ +L G
Sbjct: 273 ENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNG 323
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 88/210 (41%), Gaps = 1/210 (0%)
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
P + F +L +A+ + + M+ GI + T + ++ C G + +
Sbjct: 67 PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
+++ G P A T K + D + A+ + ++ + + +Y LI
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQV-SYRTLINGLC 185
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
+ + E+ + G + LD+ Y +I G+C+ + +A ++ EM+ K + P V
Sbjct: 186 KVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVV 245
Query: 262 TFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
T+ TL GL L+ L K+ E+I
Sbjct: 246 TYNTLICGLCIMGQLKDAIGLLHKMILENI 275
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP 57
P+V Y LI G CK R+ A++ +++ G +V TYN ++ G C++ + P
Sbjct: 452 PSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFVIP 507
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 12/283 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+ LI +C+ ++D A FLG+MI G++ V YN L+NG C+ +L F
Sbjct: 404 YSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSF----- 458
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
FDEM +G++P V S++ ++ Y K + + M KGI P T+T+++
Sbjct: 459 -----FDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLI 513
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
L R+ DA L EM+ + P+ TYN + + + A +L QM + L
Sbjct: 514 SALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGL- 572
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VP+ +TY LI + R+ ++ + + L+ Y+ L+HG C++ + ++A
Sbjct: 573 VPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALG 632
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLI-QSDMLRTWRRLKKKLDE 288
EM+++G+ V + L G I + D + LK D+
Sbjct: 633 VCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQ 675
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 130/263 (49%), Gaps = 12/263 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y++L++G+CK R+ A EM++RGV+ ++V Y VL++G + E+
Sbjct: 614 YSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIK----------EQDTS 663
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ M + + PD ++ ++ YS+A + + + M ++G P + TYT+++
Sbjct: 664 AVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLI 723
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G ++ AE L EM+ + +P+ TY CF A++L+ M + L
Sbjct: 724 NELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLL- 782
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
N +YNIL+ F L R++ ++ + + + + D +Y+ +I+ C + A +
Sbjct: 783 -ANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIE 841
Query: 247 YFVEMIEKGLLPQKVTFETLYRG 269
++ M+ KGL P + + L G
Sbjct: 842 FWDTMLNKGLKPDTLAYNFLIYG 864
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 11/289 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV +Y LI+G CK R+ A +I++G+ + VTY L+ G+C+ + FE
Sbjct: 260 NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKV------QEFE 313
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
V DEM G P + S ++ R K + D +N +K+ G P++ Y
Sbjct: 314 V----GAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVY 369
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC G+ ++AE L EM G+ + TY+ + R + A+ +M
Sbjct: 370 NALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIM 429
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ + ++ YN LI L + ++ + L + SYT LI G C K K
Sbjct: 430 AGIKI-TVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLH 488
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EA + + EM KG+ P TF TL L +++ + RL ++ E+++
Sbjct: 489 EAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNM 537
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 142/310 (45%), Gaps = 36/310 (11%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---------- 56
Y SLI G CK+ + A F EMI++G++P VV+Y L++G C + LH
Sbjct: 439 YNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMT 498
Query: 57 -----PNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
PN T+ +A ++FDEM + + P+ ++++++ + +
Sbjct: 499 GKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTV 558
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161
+ + LN M +KG+ P TY ++ LCS GR+ +A++ + ++ R + Y+
Sbjct: 559 KAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALL 618
Query: 162 KEY--RGR-KDANGAMK--LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y GR +DA G + + R + D +C Y +LI + V + ++
Sbjct: 619 HGYCKEGRLRDALGVCREMVKRGVDMDLVC------YAVLIDGTIKEQDTSAVFGLLKNM 672
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
L D YT +I G + K+A + MI++G P VT+ TL L ++ ++
Sbjct: 673 HDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLM 732
Query: 277 RTWRRLKKKL 286
L K++
Sbjct: 733 DKAELLWKEM 742
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 22/303 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P +SL+ G + ++ A + + + G P++ YN L+N +C+ + +
Sbjct: 328 VPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCK------DGK 381
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F++ AE +F EM +G+ + ++SI++ + R K ++ L M GI TV
Sbjct: 382 FDE----AELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVY 437
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y S++ C G + A EM+ G+ P+ +Y Y + + A +LY +M
Sbjct: 438 PYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEM 497
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ PN +T+ LI NRM +++ + + + +Y ++I G C++
Sbjct: 498 TGKGI-APNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGN 556
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
+A + +M++KGL+P T YR LI S + T R + K F +
Sbjct: 557 TVKAFELLNQMVQKGLVPDTYT----YRPLISS-LCSTGRVCEAK------KFIDDLHRE 605
Query: 301 HFK 303
HFK
Sbjct: 606 HFK 608
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 47/268 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YTS+I G+ K + A MI+ G PN+VTY L+N +C+
Sbjct: 679 PDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAG-------- 730
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ AE ++ EM V P+ ++ L +R + ++ N M KG+ +
Sbjct: 731 --LMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVS 787
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V+ C GR+E+A +LL EM+ N + P TY+ + R + +GA++
Sbjct: 788 YNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEF----- 842
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
W+ + L D +Y LI+G C +
Sbjct: 843 -------------------------------WDTMLNKGLKPDTLAYNFLIYGCCIAGEL 871
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
+A + +MI +G+ P + T ++L G
Sbjct: 872 GKAFELRDDMIRRGVKPNQATHKSLSHG 899
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ N Y L+ G+CK+ R++ A + L EMI+ + P+ +TY+ ++ CRR +L
Sbjct: 782 LANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLD---- 837
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + +D M +G++PD +++ +++ A + + + + M +G+ P A
Sbjct: 838 ------GAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQA 891
Query: 121 TYTSV 125
T+ S+
Sbjct: 892 THKSL 896
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 46/226 (20%)
Query: 45 LLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL 104
LL + R L P E FE + EK D + G F +++ Y + + S+
Sbjct: 127 LLQTLLLRGGLDPREVFEALLDCFEKC-DFISSLG-------FDLLIQSYVQEKRMFDSV 178
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
M++ + P V T V+ L R++ L GE++ G+ P
Sbjct: 179 LIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRP------------ 226
Query: 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
+I+ Y +I F L +E+ ++ S+L +
Sbjct: 227 ------------------------DIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVV 262
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ Y +LIHGLC+ ++ EA + +I+KGL +VT+ TL GL
Sbjct: 263 V--YNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGL 306
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL--HP 57
P+ Y LIYG C + A +MI RGV+PN T+ L +G R+ S+ HP
Sbjct: 853 PDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRKFSISTHP 910
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 11/270 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y+S+I +CK R A M++ G +PN YN L+NG CR +
Sbjct: 438 DVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSK-------- 489
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I +A K++ EM G P + +++ ++ +A K Q + M E+G P + TY
Sbjct: 490 --INDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTY 547
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S+++ LC +++ A + E++ G+ +N + A +Y +MKE
Sbjct: 548 ASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKE 607
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ C PN+ TYN L+ F + +D +W + + L D+ +Y I GLC +
Sbjct: 608 KN-CSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTP 666
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
E E++ G++P +T+ L R +I+
Sbjct: 667 EGVLLLNEVLATGIMPTVITWSILVRAVIK 696
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 125/305 (40%), Gaps = 46/305 (15%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V +Y SLI G+C++ R A +F G+ + TYN++ G+ +
Sbjct: 333 DVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELL 391
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + N PD +F ++H + + L + G V +Y
Sbjct: 392 KQLENDASC---------SPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSY 442
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+S++ C GR DA E+ MV++G P++ YN + N A+K+Y +M
Sbjct: 443 SSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTS 502
Query: 183 DDLCVPNIHTYNILIG----------------------------MFMALNR-------MD 207
+ C P I TYN LI + +L R +D
Sbjct: 503 NG-CCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVD 561
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ IW+ + + L +D+ + +LIHGLC K EA ++EM EK P VT+ TL
Sbjct: 562 VALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLM 621
Query: 268 RGLIQ 272
G +
Sbjct: 622 DGFYE 626
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 17/278 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI+G C+ +D A R +M++ G+ +V YN L+ G C
Sbjct: 302 YGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGR----------TG 351
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVATYTSV 125
A K +D GI +T+++I+ + + + L ++ C P T+ ++
Sbjct: 352 EAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTL 410
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
+ LC G A E+L + +G +Y+ + + A ++Y+ M +D
Sbjct: 411 IHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDG- 469
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
C PN H YN LI F +++++ +I+ + + + +Y LI GLC+ +K++EA
Sbjct: 470 CKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEAS 529
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSD----MLRTW 279
EM+E+G P T+ +L RGL + LR W
Sbjct: 530 SLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIW 567
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 14/274 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ Y ++ C +D A + RGV P+ VTY+ L++G+ + L
Sbjct: 156 PNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLD----- 210
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL-NFMKEKGICPTVA 120
NA + DEM G++ D ++ +L R + ++ +++ G P +A
Sbjct: 211 -----NALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLA 265
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC GR ++A E+ M+ N TY D + A ++Y M
Sbjct: 266 TYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDM 325
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L V ++ YN LI F + R + W+ S + + +Y ++ GL +
Sbjct: 326 VKAGL-VLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGI-RQITTYNIMTKGLLDSGM 383
Query: 241 WKEACQYFVEM-IEKGLLPQKVTFETLYRGLIQS 273
EA + ++ + P KVTF TL GL ++
Sbjct: 384 VSEATELLKQLENDASCSPDKVTFGTLIHGLCEN 417
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 137/305 (44%), Gaps = 23/305 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEM----IERGVEPNVVTYNVLLNGVCRRASLHP 57
P V+ + +L+ + + R A+ F + R + PN+ TYN++L +C R
Sbjct: 117 PGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGD--- 173
Query: 58 NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
+ A +F +R RG+ PD ++S ++ ++ + +LD L+ M G+
Sbjct: 174 -------VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQA 226
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKL 176
Y +++ G E A ++ ++VR+ G SP+ TY A ++
Sbjct: 227 DAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEV 286
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+ +M ++ + TY ILI +D +++ + + L LD+ Y LI G C
Sbjct: 287 WSRMMANNHQADTV-TYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFC 345
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES------ 290
E + EA +++ G + Q T+ + +GL+ S M+ L K+L+ ++
Sbjct: 346 EVGRTGEAWKFWDSTGFSG-IRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDK 404
Query: 291 ITFGS 295
+TFG+
Sbjct: 405 VTFGT 409
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 108/239 (45%), Gaps = 6/239 (2%)
Query: 34 GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
G P V ++N LL+ R + F ++ + F R I P++ +++I+L
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHG--AFG----RRIAPNLQTYNIILRS 167
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
++ + ++ +G+ P TY++++ L ++++A +LL EM GV
Sbjct: 168 LCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQAD 227
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
A YN AMK++ Q+ D PN+ TY +++ L R E+W
Sbjct: 228 AVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVW 287
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ + + D +Y +LIHGLC A + + +M++ GL+ + +L +G +
Sbjct: 288 SRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCE 346
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK----GSELGLDLD 226
+ A+ +R + C P + ++N L+ F+ R + + G + +L
Sbjct: 100 DAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQ 159
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+Y +++ LC + A F + +G+ P +VT+ TL GL + D L
Sbjct: 160 TYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQL 209
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 76/199 (38%), Gaps = 37/199 (18%)
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEK-GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147
+VL +SRA P +L + G P V ++ +++ R DA+ +
Sbjct: 88 VVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASL-- 145
Query: 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207
++ F GR+ A PN+ TYNI++ A +D
Sbjct: 146 --------SHGAF-----GRRIA-----------------PNLQTYNIILRSLCARGDVD 175
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+++ ++ + D +Y+ L+ GL + + A EM G+ V + L
Sbjct: 176 RAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALL 235
Query: 268 RGLIQSDM----LRTWRRL 282
G ++ M ++ W +L
Sbjct: 236 SGCFRTGMFEKAMKVWEQL 254
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 141/316 (44%), Gaps = 26/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V+ Y LI +CK I A+ E+ +RG+ P V++N L+NG+C+ +L R
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280
Query: 62 EKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+KT+ AE++FDEM+ RG+ P+ +F+ ++ R
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + +++ + M G+ P + Y +++ LC G + A +L+ EM G+ P T
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y Y D AM++ + M E+ + + N+ + LI F R+ +
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV-AFTALISGFCRDGRVRDAERTLREM 459
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + D +YTM+I G C+K K + EM G P +T+ L GL + +
Sbjct: 460 VEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQM 519
Query: 277 RTWRRLKKKLDEESIT 292
+ L + + +T
Sbjct: 520 KNANMLLEAMLNLGVT 535
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 46/268 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +T+LI G C+ RID A +M+ GV+P++V YN LLNG+C+
Sbjct: 326 PNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD------- 378
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K+ DEMR+ G++PD +++ ++ Y + + +++ M E+G+
Sbjct: 379 ---VNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVA 435
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ C GR+ DAE L EMV G+ P TY Y + + KL ++M
Sbjct: 436 FTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM- 494
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+I H G + +Y +L++GLC++ +
Sbjct: 495 -----------------------------QINGHKPG------VITYNVLMNGLCKQGQM 519
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
K A M+ G+ P +T+ L G
Sbjct: 520 KNANMLLEAMLNLGVTPDDITYNILLEG 547
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 128/266 (48%), Gaps = 11/266 (4%)
Query: 26 FLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVT 85
F E++E G P V YN+L+N C+ E +IR+A+ +F+E+R RG+ P
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCK----------EGSIRDAKLIFNEIRKRGLRPTTV 259
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
SF+ +++ ++ M+E I P V TY+ ++ LC GR++ AE+L EM
Sbjct: 260 SFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEM 319
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
+ G+ P+ T+ + + AM Y QM + P++ YN L+ +
Sbjct: 320 QQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGV-KPDLVMYNTLLNGLCKVGD 378
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
++ R++ + ++ + D +YT LI G C++ + A + M E+G++ V F
Sbjct: 379 VNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESI 291
L G + +R R +++ E +
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGM 464
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ MY +L+ G CK+ ++ A + + EM G++P+ +TY L++G C+ L
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420
Query: 62 EKT-------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
K +R+AE+ EM G++PD ++++V+ Y +
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ L M+ G P V TY ++ LC G++++A LL M+ GV+P T
Sbjct: 481 KGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDIT 540
Query: 157 YNCFFKEYRGRKDANGAMKL 176
YN + + A +KL
Sbjct: 541 YNILLEGHCKNGKAEDLLKL 560
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT +I G+CK + M + L EM G +P V+TYNVL+NG+C++ +
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQM------ 519
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+NA + + M G+ PD +++I+L + + K + D L EKG+ A
Sbjct: 520 ----KNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE---DLLKLRNEKGLIVDYAY 572
Query: 122 YTSVV 126
YTS+V
Sbjct: 573 YTSLV 577
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 132/266 (49%), Gaps = 13/266 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI G C +I A +M+ GV+PN++TYN L+NG C+ L
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML------ 382
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +F ++ +G P +++++ Y + K M+ +GI P V T
Sbjct: 383 ----KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGT 438
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G IE A++L ++ G+ P T++ + Y + ++ A L ++M
Sbjct: 439 YNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMS 497
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV-KGSELGLDLDSYTMLIHGLCEKQK 240
+ L P TYNI++ + + + + K L +++ SY +L+ G +K K
Sbjct: 498 KMGL-KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
++A EM+EKGL+P ++T+E +
Sbjct: 557 LEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 9/287 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + +I CK +++ A + +M G PNVV+YN L++G C+ L N +
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK---LGGNGKM 277
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K A+ V EM + P++T+F+I++ + + S+ M ++ + P V +
Sbjct: 278 YK----ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC+ G+I +A + +MV GV P+ TYN + A+ ++ +K
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
VP YN+LI + L ++D + ++ + D+ +Y LI GLC
Sbjct: 394 GQG-AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ A + F ++ KG LP VTF L G + R L K++ +
Sbjct: 453 EAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSK 498
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 113/229 (49%), Gaps = 4/229 (1%)
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+ E V+ EM R I+P+V +F++V++ + K + D + MK G P V +Y +++
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 127 KCLCSC---GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
C G++ A+ +L EMV N VSP+ T+N + + G+MK++++M +
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
D+ PN+ +YN LI ++ + + + + + +L +Y LI+G C+ KE
Sbjct: 326 DV-KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKE 384
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A F + +G +P + L + + LK++++ E I
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P +MY LI +CK+ +ID EM G+ P+V TYN L+ G+CR +
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN------ 451
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A+K+FD++ +G+ PD+ +F I++ Y R + + + L M + G+ P
Sbjct: 452 ----IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHL 506
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY V+K C G ++ A + +M + + + +YN + Y + A L +
Sbjct: 507 TYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNE 566
Query: 180 MKEDDLCVPNIHTYNIL 196
M E L VPN TY I+
Sbjct: 567 MLEKGL-VPNRITYEIV 582
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ + L+ G+C+ A L EM + G++P +TYN+++ G C+ +L
Sbjct: 467 LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + R + +V S++++L YS+ K + + LN M EKG+ P
Sbjct: 527 MRTQME---------KERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRI 577
Query: 121 TYTSVVKCLCSCGRIEDAE 139
TY V + + G + D E
Sbjct: 578 TYEIVKEEMVDQGFVPDIE 596
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 145/333 (43%), Gaps = 48/333 (14%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ +LI+G CK + A R L +M+ERG + +TYN L++G C+ E
Sbjct: 557 NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCK----------E 606
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ K+ EM +GIEPD ++++++H R K +++ N K + + P V TY
Sbjct: 607 GKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTY 666
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK- 181
++ C +IE+ E+L E++ + ++ YN + Y + A KL+ M+
Sbjct: 667 GVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRS 726
Query: 182 -----------------------EDDLCV----------PNIHTYNILIGMFMALNRMDM 208
ED C+ PN+ Y LIG + L +MD
Sbjct: 727 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 786
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
V + + ++ + +YT++I G + K A + EM+ KG++P VT+ L
Sbjct: 787 VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTN 846
Query: 269 GLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
G + + K L E+ + F S H
Sbjct: 847 GFCKEGKIEE----GKLLAEDGVGFNSPLFLIH 875
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +LI+G CK +D A RF +M++ GV ++TY+VL+NG+ + E+F
Sbjct: 346 PNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKL------EKF 399
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A V E +G P+ ++ ++ Y + +L M KGI P T
Sbjct: 400 NE----ANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVT 455
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
S+++ C G++E AE +L EM+ G S + + A++ R+M
Sbjct: 456 LNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML 515
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ PN L+G + E+W + G +L + LIHGLC+
Sbjct: 516 LRNM-RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 574
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+EA + +M+E+G + K+T+ TL G + + +L+ ++ ++ I
Sbjct: 575 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGI 624
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 137/306 (44%), Gaps = 11/306 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +Y +LI G+CK+ + A R G+M+ +G+ PN VT N ++ G C+ +
Sbjct: 416 PNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQM------ 469
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE + +EM RG + +F+ ++H + + +L L M + + P
Sbjct: 470 ----EQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGL 525
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T++V LC G+ DA EL ++ G + T N + A++L ++M
Sbjct: 526 LTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKML 585
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + I TYN LI +++ ++ + + D +Y +LIHG+C K
Sbjct: 586 ERGFVLDKI-TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKL 644
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
EA + E + L+P T+ + G ++D + +L +L +++ S N
Sbjct: 645 DEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTL 704
Query: 302 FKPYRR 307
+ Y R
Sbjct: 705 IRAYCR 710
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 17/233 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +I G+CK ++I+ E+ E++ + +E N V YN L+ CR +
Sbjct: 660 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGN------ 713
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
T+ A K+ D+MR +GI P ++S ++H + + + ++ M+++G+ P V
Sbjct: 714 ---TVE-AFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVV 769
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YT+++ C G+++ +L EM + P+ TY Y D A KL +M
Sbjct: 770 CYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM 829
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233
+ VP+ TYN+L F +++ + + +E G+ +S LIH
Sbjct: 830 VGKGI-VPDTVTYNVLTNGFCKEGKIEEGKLL------AEDGVGFNSPLFLIH 875
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 133/292 (45%), Gaps = 24/292 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P VK T L+ K N ++ + ++ E + +GV P+V ++ +N C+
Sbjct: 277 PTVKTCTFLLSSLVKANELEKS-YWVFETMRQGVSPDVYLFSTAINAFCKGGK------- 328
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK----GICP 117
+ +A ++F +M G+ P+V +++ ++H + +LD+ KEK G+
Sbjct: 329 ---VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCK----HGNLDEAFRFKEKMVKDGVNA 381
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T+ TY+ ++ L + +A +L E + G +P+ YN Y + A+++
Sbjct: 382 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 441
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
M + PN T N +I F + +M+ I + ++ ++T +IH LC
Sbjct: 442 GDMVSKGIN-PNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCM 500
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK 285
+++ A ++ EM+ + + P TL GL + SD + W RL +K
Sbjct: 501 NSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK 552
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 94/231 (40%), Gaps = 42/231 (18%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP---QLSLDKLNFMKEKGICPTVAT 121
I +A +E+ G+ V + +++HVY + + ++ F+ KG+ PTV T
Sbjct: 224 IASAMADLNEVGESGVA--VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKT 281
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
T ++ L +E + + E +R GVSP ++ + A++L+ M+
Sbjct: 282 CTFLLSSLVKANELEKSYWVF-ETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDME 340
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN+ TYN LIHGLC+
Sbjct: 341 KLGVS-PNVVTYN-----------------------------------NLIHGLCKHGNL 364
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EA ++ +M++ G+ +T+ L GL++ + + K+ E+ T
Sbjct: 365 DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFT 415
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 26/297 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-----H 56
P+ Y SLI G CK R++ A +M+E G+ PN VTYN L++G C + L +
Sbjct: 317 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 376
Query: 57 PNERFEKTIR--------------------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+E +K I A+ + EMR +GI PD +++I+++ YSR
Sbjct: 377 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 436
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D N M KGI PT TYTS++ L R+++A++L +++ GVSP
Sbjct: 437 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 496
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N + + A L ++M + P+ T+N L+ +++ R + + +
Sbjct: 497 FNAMVDGHCANGNVERAFMLLKEMDRKSV-PPDEVTFNTLMQGRCREGKVEEARMLLDEM 555
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
K + D SY LI G + K+A + EM+ G P +T+ L + L ++
Sbjct: 556 KRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 612
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 144/292 (49%), Gaps = 11/292 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P ++ ++ + K+NR++MA EM + V T+N+++N +C+
Sbjct: 211 VPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCK--------- 261
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E ++ A + M G +P+V S++ ++H YS + + L+ M+ KGI P
Sbjct: 262 -EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 320
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S++ +C GR+E+A L +MV G+ P+A TYN Y + D A +M
Sbjct: 321 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 380
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + +P++ TYN+L+ RM ++ ++ + D +Y +LI+G
Sbjct: 381 VKKGI-MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 439
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
K+A EM+ KG+ P VT+ +L L + + ++ L +K+ ++ ++
Sbjct: 440 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVS 491
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V M+ +++ G C ++ A L EM + V P+ VT+N L+ G CR
Sbjct: 492 PDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR---------- 541
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A + DEM+ RGI+PD S++ ++ Y R + + + M G PT+ T
Sbjct: 542 EGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLT 601
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
Y +++KCLC + AEELL EMV G+SP TY
Sbjct: 602 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 637
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 14/242 (5%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A K F M+ +GI P + + + +L ++ + ++ +++ M I TV T+ +V
Sbjct: 198 AFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVN 257
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
LC G+++ A E +G M G P+ +YN Y R + GA ++ M+ +
Sbjct: 258 VLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI-E 316
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKEAC 245
P+ +TY LI R++ +++ K E+GL + +Y LI G C K + A
Sbjct: 317 PDSYTYGSLISGMCKEGRLEEASGLFD--KMVEIGLVPNAVTYNTLIDGYCNKGDLERAF 374
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLI-------QSDMLRTWRRLKKKLDEESITFGSEFQ 298
Y EM++KG++P T+ L L DM++ R KK + ++IT+
Sbjct: 375 SYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR--KKGIIPDAITYNILIN 432
Query: 299 NY 300
Y
Sbjct: 433 GY 434
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P YTSLIY + NR+ A+ +++++GV P+V+ +N +++G C +
Sbjct: 457 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN------- 509
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + EM + + PD +F+ ++ R K + + L+ MK +GI P +
Sbjct: 510 ---VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHIS 566
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ G I+DA + EM+ G +P+ TYN K ++ + A +L ++M
Sbjct: 567 YNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV 626
Query: 182 EDDLCVPNIHTYNILI 197
+ P+ TY LI
Sbjct: 627 NKGIS-PDDSTYLSLI 641
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +L+ G C+ +++ A L EM RG++P+ ++YN L++G RR
Sbjct: 527 PDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGD------- 579
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I++A +V DEM G P + +++ ++ + + L+ + L M KGI P +T
Sbjct: 580 ---IKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDST 636
Query: 122 YTSVVK 127
Y S+++
Sbjct: 637 YLSLIE 642
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV 49
P + Y +LI CK D+AE L EM+ +G+ P+ TY L+ G+
Sbjct: 597 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 12/286 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +S++ G K R+ A L +MI++G+ N V + VLL+G +
Sbjct: 520 VPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGD------ 573
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++ EM RGI PD +FS + S+A + + + + M +KG P
Sbjct: 574 ----TAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNF 629
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y S++ LC+CG++ +A +L EM + G+ P T N + A + +M
Sbjct: 630 VYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEM 689
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P+ TYN LIG + + M E N + S D+ +Y + I G C QK
Sbjct: 690 HHIGV-TPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQK 748
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A E+I G++P VT+ T+ + +DML L KL
Sbjct: 749 ISRAVTMLDELIAVGVVPNTVTYNTMMNA-VCTDMLDRAMVLTAKL 793
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 139/305 (45%), Gaps = 32/305 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
PNV MY +L+ G+ K + A EM ++G+ P+ T+N+L+ G +
Sbjct: 381 PNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYEL 440
Query: 53 ------ASLHPNER----------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+SL P+ + + A + ++M +G+ P V +F+ V+ YSR
Sbjct: 441 FRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSR 500
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + M G+ P+ +T +S++ L GR+++A +LL +M+ G+ +
Sbjct: 501 AGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVA 560
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+ Y D GA L+ +M+ +C P+ ++ I L++ +V E +
Sbjct: 561 FTVLLDGYFKVGDTAGAHSLWYEMEARGIC-PDAIAFSAFID---GLSKAGLVEEAYEAF 616
Query: 217 -KGSELGLDLDS--YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ S+ G ++ Y LIHGLC K EA + EM +KGLLP T + G +
Sbjct: 617 SEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKE 676
Query: 274 DMLRT 278
+++
Sbjct: 677 GRMKS 681
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 114/242 (47%), Gaps = 11/242 (4%)
Query: 25 RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84
+ L MI G P +N+++ C++ L R AE + M EPDV
Sbjct: 264 KLLRGMIRDGPRPCNHNFNIMILCFCQKGYL----------RVAESLLFVMPKFCCEPDV 313
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
+++I+++ Y + +L L+ M + G P++ T+++++ C+ G + +A ++
Sbjct: 314 YAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEG 373
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
+ G+SP+ YN Y +D A LY +M++ + P+ T+NIL+
Sbjct: 374 IQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGI-APDGATFNILVAGNYKYG 432
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+ E++ S L D Y + + GLC + EA Q+ +M+EKG+ P V F
Sbjct: 433 KEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFN 492
Query: 265 TL 266
++
Sbjct: 493 SV 494
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 133/324 (41%), Gaps = 44/324 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++++I +C + A + + E G+ PNV YN L++G +
Sbjct: 346 PSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFK---------- 395
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + A +++EMR +GI PD +F+I++ + K S + + P +
Sbjct: 396 ARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSL 455
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
Y V LC G++++A + L +M+ G+ PS +N Y + A K Y+ M
Sbjct: 456 YDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIML 515
Query: 181 --------------------------------KEDDLCVP-NIHTYNILIGMFMALNRMD 207
K D +P N + +L+ + +
Sbjct: 516 MFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTA 575
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+W ++ + D +++ I GL + +EA + F EM +KG +P + +L
Sbjct: 576 GAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLI 635
Query: 268 RGLIQSDMLRTWRRLKKKLDEESI 291
GL L +L++++ ++ +
Sbjct: 636 HGLCNCGKLHEALKLEREMRQKGL 659
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 1/200 (0%)
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
++ MR G+ P ++ SI+ + R L M G P + ++ C
Sbjct: 229 EILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCF 288
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C G + AE LL M + P YN YR R + A+ M ++ C P+
Sbjct: 289 CQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNG-CKPS 347
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+ T++ +I F + R+I+ ++ L ++ Y L+ G + + +A +
Sbjct: 348 LITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYE 407
Query: 250 EMIEKGLLPQKVTFETLYRG 269
EM +KG+ P TF L G
Sbjct: 408 EMRDKGIAPDGATFNILVAG 427
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 141/316 (44%), Gaps = 26/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V+ Y LI +CK I A+ E+ +RG+ P V++N L+NG+C+ +L R
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280
Query: 62 EKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+KT+ AE++FDEM+ RG+ P+ +F+ ++ R
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + +++ + M G+ P + Y +++ LC G + A +L+ EM G+ P T
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y Y D AM++ + M E+ + + N+ + LI F R+ +
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV-AFTALISGFCRDGRVRDAERTLREM 459
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ + D +YTM+I G C+K K + EM G P +T+ L GL + +
Sbjct: 460 VEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQM 519
Query: 277 RTWRRLKKKLDEESIT 292
+ L + + +T
Sbjct: 520 KNANMLLEAMLNLGVT 535
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 132/267 (49%), Gaps = 13/267 (4%)
Query: 26 FLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVT 85
F E++E G P V YN+L+N C+ E +IR+A+ +F+E+R RG+ P
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCK----------EGSIRDAKLIFNEIRKRGLRPTTV 259
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
SF+ +++ ++ M+E I P V TY+ ++ LC GR++ AE+L EM
Sbjct: 260 SFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEM 319
Query: 146 VRNGVSPSAETYNCFFK-EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
+ G+ P+ T+ +YR R+ + AM Y QM + P++ YN L+ +
Sbjct: 320 QQRGLRPNGITFTALIDGQYRSRR-MDSAMNTYHQMLTMGV-KPDLVMYNTLLNGLCKVG 377
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
++ R++ + +K + D +YT LI G C++ + A + M E+G++ V F
Sbjct: 378 DVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFT 437
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDEESI 291
L G + +R R +++ E +
Sbjct: 438 ALISGFCRDGRVRDAERTLREMVEAGM 464
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 127/293 (43%), Gaps = 61/293 (20%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
P+V Y+ LI+G CK R+D+AE+ EM +RG+ PN +T+ L++G R
Sbjct: 291 PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNT 350
Query: 53 ------ASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ P+ T+ N A K+ DEM++ G++PD +++ ++ Y +
Sbjct: 351 YHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCK 410
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +++ M E+G+ +T+++ C GR+ DAE L EMV G+ P T
Sbjct: 411 EGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDAT 470
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y Y + + KL ++M +I H
Sbjct: 471 YTMVIDGYCKKGNVKMGFKLLKEM------------------------------QINGHK 500
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
G + +Y +L++GLC++ + K A M+ G+ P +T+ L G
Sbjct: 501 PG------VITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEG 547
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ MY +L+ G CK+ ++ A + + EM G++P+ +TY L++G C+ L
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420
Query: 62 EKT-------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
K +R+AE+ EM G++PD ++++V+ Y +
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++ L M+ G P V TY ++ LC G++++A LL M+ GV+P T
Sbjct: 481 KGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDIT 540
Query: 157 YNCFFKEYRGRKDANGAMKL 176
YN + + A +KL
Sbjct: 541 YNILLEGHCKNGKAEDLLKL 560
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT +I G+CK + M + L EM G +P V+TYNVL+NG+C++ +
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQM------ 519
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+NA + + M G+ PD +++I+L + + K + D L EKG+ A
Sbjct: 520 ----KNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE---DLLKLRNEKGLIVDYAY 572
Query: 122 YTSVV 126
YTS+V
Sbjct: 573 YTSLV 577
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 140/307 (45%), Gaps = 19/307 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y L K +R+D +M V+P T+N+L++ +C L
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLE----- 170
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA +VFD+M +G +P+ S I++ Y RA +D L+ M+ G P
Sbjct: 171 -----NAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVA 225
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V+ LC G+ +AE+L+ +M G+SP T+NC A +++R M+
Sbjct: 226 YNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQ 285
Query: 182 EDD---LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
D+ L PN TYN+++ F + + R I++ +K SE L L SY + + GL
Sbjct: 286 IDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSET-LSLRSYNIWMLGLVRS 344
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITF 293
K EA EM EK + P ++ L GL + M R + + E +++T+
Sbjct: 345 GKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTY 404
Query: 294 GSEFQNY 300
+ Y
Sbjct: 405 STLLHGY 411
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 123/290 (42%), Gaps = 23/290 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y L++G CK A LG M E GV P+ VTY+ LL+G CRR
Sbjct: 364 PNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGK------- 416
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A V EM G P++ + +I+LH + + + D L M E+G T
Sbjct: 417 ---ILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVT 473
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++ LC G ++ A E++ M G + N F + R +
Sbjct: 474 CNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKK--------- 524
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C+P+ TY +IG + R+D ++ + G +L D + I+ C++ K
Sbjct: 525 ----CLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKL 580
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + EM +KG T+ +L +GL + + L ++ E I
Sbjct: 581 SSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGI 630
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 12/254 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I G CK+ R+D A++ L EMI + + P+ + ++ + C++ L
Sbjct: 526 LPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLS---- 581
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A +V EM +G + +++ ++ ++ ++ MKE+GI P V
Sbjct: 582 ------SAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVY 635
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ CL G+++DA LL EM++ G+SP+ T+ + D A +L+
Sbjct: 636 TYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIA 695
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
LC Y+ + +A +E++ L L Y LI LC+ K
Sbjct: 696 LS--LCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGK 753
Query: 241 WKEACQYFVEMIEK 254
+A +M++K
Sbjct: 754 LDDASFILHKMMDK 767
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 140/331 (42%), Gaps = 44/331 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMI---ERGV-EPNVVTYNVLLNGVCRRASLHP 57
P++ + I CK +I A R +M E G+ +PN VTYN++L G C
Sbjct: 256 PDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCS------ 309
Query: 58 NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
E A +FD M+ + S++I + R+ K + LN M EK I P
Sbjct: 310 ----EGMFEEARAIFDSMK-NSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKP 364
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ +Y +V LC G DA +LG M +GV+P TY+ Y R A +
Sbjct: 365 NLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVL 424
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
R+M + C PN++T NIL+ R ++ + GLD + +I+GLC+
Sbjct: 425 REMIQVG-CFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCK 483
Query: 238 KQKWKEACQY------------------FVEMIE-----KGLLPQKVTFETLYRGLIQSD 274
+A + F+++ + K LP +T+ T+ GL +
Sbjct: 484 AGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVG 543
Query: 275 MLRTWRR-----LKKKLDEESITFGSEFQNY 300
+ ++ + KKL +S+ F + NY
Sbjct: 544 RVDEAKKKLLEMIGKKLSPDSLIFDTFIYNY 574
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 146/307 (47%), Gaps = 18/307 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +Y L+ + NR+++ +M+ V P T+N+L+ +C L
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHL------ 163
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++FD+M RG EP+ +F I++ Y RA L+ L M+ GI P
Sbjct: 164 ----EDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVL 219
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C G+ DAE+L+ +M +G+ P ET+N G A +++R M+
Sbjct: 220 YNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQ 279
Query: 182 EDD---LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
D+ L PN+ TY +++ F ++ + + + +K + ++L+SY + + GL
Sbjct: 280 IDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRN 339
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITF 293
K EA EM+ G+ P ++ + GL ++ ML R L + + +++T+
Sbjct: 340 GKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTY 399
Query: 294 GSEFQNY 300
+ Y
Sbjct: 400 STLLHGY 406
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 134/318 (42%), Gaps = 53/318 (16%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMI---ERGV-EPNVVTYNVLLNGVCRRASLH 56
+P+V+ + S I C +I A R +M E G+ PNV+TY ++L G C+ L
Sbjct: 249 VPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLE 308
Query: 57 PNERFEKT--------------------IRNAEK-----VFDEMRVRGIEPDVTSFSIVL 91
+ T IRN + V EM GIEPD+ S++IV+
Sbjct: 309 EAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVM 368
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ + + M GI P TY++++ CS G++ +A LL EM+ N S
Sbjct: 369 DGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCS 428
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P+ T N + A L ++M E V + T NI+I ++D E
Sbjct: 429 PNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTV-TCNIIINALCNNGQLDKAIE 487
Query: 212 I----WNH-------------------VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
I W H + G + DL +Y+ +I GLC+ + +A + F
Sbjct: 488 IVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKF 547
Query: 249 VEMIEKGLLPQKVTFETL 266
+EM+ KGL P ++T
Sbjct: 548 IEMMSKGLQPDSAIYDTF 565
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 129/270 (47%), Gaps = 14/270 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y+++I G CK R+D A++ EM+ +G++P+ Y+ ++ CR
Sbjct: 522 PDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCR---------- 571
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSF-SIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I +A +V +M RG + ++ S++L + S+ +L ++ M+EKG+ P V
Sbjct: 572 EGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFEL-YGLIDEMREKGVSPDVC 630
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ CLC GRI DA +L EM++ G+SP+ ++ K + D + +++
Sbjct: 631 TYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIA 690
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++C Y ++ + ++ +E++ + Y LI LC+ +K
Sbjct: 691 L--NVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEK 748
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ A +I+KG +F + G
Sbjct: 749 LEAASDVLHRLIDKGYQFDPASFMPVIDGF 778
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 133/296 (44%), Gaps = 34/296 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y++L++G+C ++ A L EMI PN T NVLL+ + +
Sbjct: 393 LPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWK--------- 443
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC---- 116
E I AE + +M +G D + +I+++ + +++ +N M G
Sbjct: 444 -EGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGN 502
Query: 117 -------------------PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
P + TY++++ LC GR++DA++ EM+ G+ P + Y
Sbjct: 503 LGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIY 562
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
+ F + + A ++ + M E C + TYN LI + N++ + + + ++
Sbjct: 563 DTFIHSFCREGKISSAFQVLKDM-EKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMR 621
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ D+ +Y +++ LCE + +A EM++KG+ P +F L + ++
Sbjct: 622 EKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKA 677
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 125/293 (42%), Gaps = 15/293 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + L+ G+C+ LG+M G+ PN V YN L++ C+ H
Sbjct: 180 PNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTH----- 234
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK---PQLSLDKLNFMKEKGIC-P 117
+AEK+ D+MR G+ P V +F+ + + K + +E G+ P
Sbjct: 235 -----DAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHP 289
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V TY ++ C G +E+A+ L+ M RN + E+YN + A +
Sbjct: 290 NVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVL 349
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
++M + P+I++YNI++ + R + + + + D +Y+ L+HG C
Sbjct: 350 KEMLGIGI-EPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCS 408
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
K K EA EMI P T L L + + L +K++E+
Sbjct: 409 KGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKG 461
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 132/265 (49%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y S+I CK +D A L M++ GV P+ +TYN +++G C +S P E
Sbjct: 114 PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC--SSGQPKE-- 169
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +MR G+EPDV +++ ++ + + + + M ++G+ P + T
Sbjct: 170 ------AIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 223
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ + G + + LL MVRNG+ P+ ++ Y ++ AM ++ +M+
Sbjct: 224 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L PN TY +I + R++ + + L D Y LIH LC KW
Sbjct: 284 QQGLN-PNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
++A + F+EM+++G+ + F ++
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSI 367
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 143/298 (47%), Gaps = 18/298 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I G+ K +D +M+++ + PNVVTYN ++ +C+
Sbjct: 86 PDVVSYSTVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCK---------- 128
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+T+ A +V M G+ PD +++ ++H + + +P+ ++ L M+ G+ P V T
Sbjct: 129 AQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVT 188
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR +A ++ M + G+ P TY + Y + L M
Sbjct: 189 YNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMV 248
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN + ++IL+ + +++ +++ ++ L + +Y +I LC+ +
Sbjct: 249 RNGIH-PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRV 307
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
++A YF +MI++GL P + + +L L D L ++ + I + F N
Sbjct: 308 EDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFN 365
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 11/263 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y S+++G+C + A FL +M GVEP+VVTYN L++ +C+
Sbjct: 148 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR------ 201
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+FD M RG++PD+T++ +L Y+ L+ M GI P
Sbjct: 202 ----CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 257
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++ +V ++E+A + +M + G++P+A TY AM + QM
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 317
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L P+ YN LI ++ + E++ + + L + +I C++ +
Sbjct: 318 IDEGL-RPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 376
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
E+ + F M+ G+ P +T
Sbjct: 377 VIESGKLFDLMVRIGVKPDIITL 399
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 26/280 (9%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE- 81
A E++ RG+ P+V +YN+LLNG+C E + A ++ M G +
Sbjct: 36 ARHVFDELLRRGI-PDVFSYNILLNGLCD----------ENRSQEALELLHIMADDGGDC 84
Query: 82 -PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
PDV S+S V++ + + + LDK M ++ I P V TY S++ LC ++ A E
Sbjct: 85 PPDVVSYSTVINGFFK----EGDLDK---MLDQRISPNVVTYNSIIAALCKAQTVDKAME 137
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
+L MV++GV P TYN + A+ ++M+ D + P++ TYN L+
Sbjct: 138 VLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGV-EPDVVTYNSLMDYL 196
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
R R+I++ + L D+ +Y L+ G K E M+ G+ P
Sbjct: 197 CKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 256
Query: 261 VTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFGS 295
F L + ++ ML + ++ L+ ++T+G+
Sbjct: 257 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT 296
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 144/381 (37%), Gaps = 84/381 (22%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+V Y SL+ CK R A + M +RG++P++ TY LL G + +L
Sbjct: 184 PDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGL 243
Query: 56 ---------HPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
HPN ++ + A VF +MR +G+ P+ ++ V+ V +
Sbjct: 244 LDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCK 303
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM----------- 145
+ + + ++ M ++G+ P Y S++ LC + E AEEL EM
Sbjct: 304 SGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIF 363
Query: 146 ------------------------VRNGVSPSAETYNCFFKEYRGRKDANGAMKLY---- 177
VR GV P T F R+D + + +Y
Sbjct: 364 FNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGS--ARRDYSLFVNIYFIFT 421
Query: 178 ----RQMKEDDLCV--------------PNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
KE + V P + TYNI++ D ++ ++
Sbjct: 422 NMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLM 481
Query: 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 279
+L L+ ++ ++I L + + EA FV GL+P T+ + +I +L
Sbjct: 482 DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 541
Query: 280 RRLKKKLDEESITFGSEFQNY 300
+L +++ T S N+
Sbjct: 542 DQLFLSMEDNGCTVDSGMLNF 562
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 35/202 (17%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM--------------- 180
EDA + E++R G+ P +YN + A++L M
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 181 -------KEDDL-------CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
KE DL PN+ TYN +I +D E+ + S + D
Sbjct: 93 TVINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCM 152
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL---- 282
+Y ++HG C + KEA + +M G+ P VT+ +L L ++ R++
Sbjct: 153 TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212
Query: 283 -KKKLDEESITFGSEFQNYHFK 303
K+ L + T+G+ Q Y K
Sbjct: 213 TKRGLKPDITTYGTLLQGYATK 234
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 22/207 (10%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ S+I CK R+ + + M+ GV+P+++T L R SL N F T
Sbjct: 364 FNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFT-- 421
Query: 67 NAEKVFDEMRVRGIE-------------PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK 113
N D+ + + P + +++I+LH K +L+ D L +
Sbjct: 422 NMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLC---KNKLTDDALRMFQNL 478
Query: 114 GICPT---VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
+ T+ ++ L GR ++A++L NG+ P+ TY + G+
Sbjct: 479 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 538
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILI 197
+L+ M ED+ C + N ++
Sbjct: 539 EELDQLFLSM-EDNGCTVDSGMLNFIV 564
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P + TYN++L+G+C+ K +A ++F + + ++ + +F+I++ +
Sbjct: 450 PFLGTYNIILHGLCKN----------KLTDDALRMFQNLCLMDLKLEARTFNIMIDALLK 499
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D G+ P TY + + + G +E+ ++L M NG + +
Sbjct: 500 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGM 559
Query: 157 YNCFFKEYRGRKDANGA 173
N +E R + A
Sbjct: 560 LNFIVRELLQRGEITRA 576
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 139/296 (46%), Gaps = 11/296 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI CK + A + EM+ G++ + T N LL +C+
Sbjct: 418 PDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCK---------- 467
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK AE++ RG PD S+ V+ Y + +KP+ +L + M ++ + P+++T
Sbjct: 468 EKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSIST 527
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K L + G++ +A + L E++ G+ P TYN Y D A + + +M
Sbjct: 528 YNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMV 587
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ P++ T N L+ R++ +++ +D+ +Y LI LC+
Sbjct: 588 ENSF-KPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDV 646
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
A ++F +M +GL P T+ L L ++ +++ KL+E +G F
Sbjct: 647 DTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFF 702
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 151/346 (43%), Gaps = 68/346 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGV--CRRASLHPN 58
P++ Y L G C+ ++D A + EM + G V P+VVTYN L++ C+R+S
Sbjct: 312 PDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSS---- 367
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+A + +EMR +G++ + + +I++ R + + +L +L M E+G+ P
Sbjct: 368 --------DALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPD 419
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN-------------------- 158
V TY +++ C G + A L+ EMVR+G+ T N
Sbjct: 420 VITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLR 479
Query: 159 -------------------CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
+FKEY+ A+ L+ +M + L P+I TYN LI
Sbjct: 480 APPQRGFVPDEVSYGTVMAAYFKEYKPEP----ALCLWDEMIKRKL-TPSISTYNTLIKG 534
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ ++ + N + L D +Y ++IH C++ ++A Q+ +M+E P
Sbjct: 535 LSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPD 594
Query: 260 KVTFETLYRGLI-------QSDMLRTWRRLKKKLDEESITFGSEFQ 298
VT TL GL + +W KK+D IT+ + Q
Sbjct: 595 VVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVD--VITYNTLIQ 638
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 47/308 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +++ + K + + A EMI+R + P++ TYN L+ G+ L E
Sbjct: 487 VPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKL--TEA 544
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K +E+ G+ PD T+++I++H Y + + + N M E P V
Sbjct: 545 IDK--------LNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVV 596
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +++ LC GR+E A +L V G TYN + D + A++ + M
Sbjct: 597 TCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADM 656
Query: 181 KEDDLCVPNIHTYNILIG-------------MFMALNRMDMV--REIWNHVK-------- 217
+ L P++ TYN+L+ M LN + R + +K
Sbjct: 657 EVRGL-QPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVET 715
Query: 218 -------------GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
G+ G D +SY I LC + KEA EM++KG+ T+
Sbjct: 716 GKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYI 775
Query: 265 TLYRGLIQ 272
TL GLI+
Sbjct: 776 TLMEGLIK 783
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 119/303 (39%), Gaps = 48/303 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNER 60
P + + + + ++ +A + L RG V P++ N +L+ + R S P
Sbjct: 134 PTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQAS 193
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ F + + P+ +F++++H + +L L+ M+ G+ P
Sbjct: 194 LD--------AFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAV 245
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY---------------- 164
TY +++ C G + +A LL M + G+ P+ TYN Y
Sbjct: 246 TYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAM 305
Query: 165 ---------------------RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL 203
G+ D A KL +M++ + P++ TYN L+
Sbjct: 306 TAFGFEPDLWTYNVLAAGLCQAGKVDE--AFKLKDEMEQLGIVSPDVVTYNTLVDACFKC 363
Query: 204 NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
R + ++ + L ++ +++ GLC + + +EA M E+GL P +T+
Sbjct: 364 QRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITY 423
Query: 264 ETL 266
TL
Sbjct: 424 NTL 426
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 132/265 (49%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y S+I CK +D A L M++ GV P+ +TYN +++G C +S P E
Sbjct: 114 PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC--SSGQPKE-- 169
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +MR G+EPDV +++ ++ + + + + M ++G+ P + T
Sbjct: 170 ------AIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 223
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ + G + + LL MVRNG+ P+ ++ Y ++ AM ++ +M+
Sbjct: 224 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L PN TY +I + R++ + + L D Y LIH LC KW
Sbjct: 284 QQGLN-PNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
++A + F+EM+++G+ + F ++
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSI 367
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 143/298 (47%), Gaps = 18/298 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I G+ K +D +M+++ + PNVVTYN ++ +C+
Sbjct: 86 PDVVSYSTVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCK---------- 128
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+T+ A +V M G+ PD +++ ++H + + +P+ ++ L M+ G+ P V T
Sbjct: 129 AQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVT 188
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR +A ++ M + G+ P TY + Y + L M
Sbjct: 189 YNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMV 248
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN + ++IL+ + +++ +++ ++ L + +Y +I LC+ +
Sbjct: 249 RNGIH-PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRV 307
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
++A YF +MI++GL P + + +L L D L ++ + I + F N
Sbjct: 308 EDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFN 365
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 147/341 (43%), Gaps = 68/341 (19%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y S+++G+C + A FL +M GVEP+VVTYN L++ +C+
Sbjct: 148 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR------ 201
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTS---------------------------------- 86
A K+FD M RG++PD+T+
Sbjct: 202 ----CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 257
Query: 87 -FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
FSI++ Y++ K + ++ + M+++G+ P TY +V+ LC GR+EDA +M
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 317
Query: 146 VRNGVSPSAETYN------CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
+ G+ P + YN C F ++ A +L+ +M + +C+ I +N +I
Sbjct: 318 IDEGLRPDSIVYNSLIHSLCIFDKWE------KAEELFLEMLDRGICLSTIF-FNSIIDS 370
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
R+ ++++ + +G+ D T+ + EA FV GL+P
Sbjct: 371 HCKEGRVIESGKLFDLM--VRIGVKPDIITL--------GRNDEAKDLFVAFSSNGLVPN 420
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
T+ + +I +L +L +++ T S N+
Sbjct: 421 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 461
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 26/280 (9%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE- 81
A E++ RG+ P+V +YN+LLNG+C E + A ++ M G +
Sbjct: 36 ARHVFDELLRRGI-PDVFSYNILLNGLCD----------ENRSQEALELLHIMADDGGDC 84
Query: 82 -PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
PDV S+S V++ + + + LDK M ++ I P V TY S++ LC ++ A E
Sbjct: 85 PPDVVSYSTVINGFFK----EGDLDK---MLDQRISPNVVTYNSIIAALCKAQTVDKAME 137
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
+L MV++GV P TYN + A+ ++M+ D + P++ TYN L+
Sbjct: 138 VLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGV-EPDVVTYNSLMDYL 196
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
R R+I++ + L D+ +Y L+ G K E M+ G+ P
Sbjct: 197 CKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 256
Query: 261 VTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFGS 295
F L + ++ ML + ++ L+ ++T+G+
Sbjct: 257 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT 296
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++I CK R++ A + +MI+ G+ P+ + YN L++ +C +++
Sbjct: 289 PNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIF------DKW 342
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK AE++F EM RGI F+ ++ + + + S + M G+ P + T
Sbjct: 343 EK----AEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
GR ++A++L NG+ P+ TY + G+ +L+ M
Sbjct: 399 L----------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM- 447
Query: 182 EDDLCVPNIHTYNILI 197
ED+ C + N ++
Sbjct: 448 EDNGCTVDSGMLNFIV 463
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 35/202 (17%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM--------------- 180
EDA + E++R G+ P +YN + A++L M
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 181 -------KEDDL-------CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
KE DL PN+ TYN +I +D E+ + S + D
Sbjct: 93 TVINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCM 152
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL---- 282
+Y ++HG C + KEA + +M G+ P VT+ +L L ++ R++
Sbjct: 153 TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212
Query: 283 -KKKLDEESITFGSEFQNYHFK 303
K+ L + T+G+ Q Y K
Sbjct: 213 TKRGLKPDITTYGTLLQGYATK 234
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +Y SLI+ C ++ + AE EM++RG+ + + +N +++ C+
Sbjct: 324 PDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCK---------- 373
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + + K+FD M G++PD+ + + + D G+ P T
Sbjct: 374 EGRVIESGKLFDLMVRIGVKPDIITLG----------RNDEAKDLFVAFSSNGLVPNYWT 423
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGA 173
Y + + + G +E+ ++L M NG + + N +E R + A
Sbjct: 424 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 475
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 148/319 (46%), Gaps = 46/319 (14%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y +I G C+ ++ A F EM++ G+ P+ TY L+NG+C+ L
Sbjct: 279 NEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRL------- 331
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A+ + DEM G++P+V ++ ++ + + K + D LN M G+ P Y
Sbjct: 332 ---KEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMY 388
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++++ LC G++ A +LL EM++ G P TY+ + + D +GA +L +M+
Sbjct: 389 DNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRN 448
Query: 183 DDLCVPNIHTYNILIGMFM-------ALNRM-DMVRE------------IWNHVKGSELG 222
+ +PN +TY I+I A N + +M+ E I H K +
Sbjct: 449 SGI-LPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHIS 507
Query: 223 L---------------DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
L DL Y LI GL + +EA +Y+ ++ ++GL+P + T+ L
Sbjct: 508 LACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLI 567
Query: 268 RGLIQSDMLRTWRRLKKKL 286
G ++ L +L +++
Sbjct: 568 HGYCKTRNLEKADQLLQQM 586
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 11/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y +L+ G+ K + A L EMI GV+PN + Y+ L+ G+C+ L
Sbjct: 348 PNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLG----- 402
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+ +EM G PD ++ ++ + + + + + LN M+ GI P T
Sbjct: 403 -----RASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYT 457
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC G ++A LL EM+ G+ P+A Y + + A + M
Sbjct: 458 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMT 517
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ +P++ YN LI + R++ E + V+ L D +Y+ LIHG C+ +
Sbjct: 518 KANV-LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNL 576
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
++A Q +M+ GL P T+ L G +S+
Sbjct: 577 EKADQLLQQMLNSGLKPNADTYTDLLEGYFKSN 609
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 135/300 (45%), Gaps = 27/300 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNG------------- 48
PN MY +LI G CKI ++ A + L EMI+ G P+ TY+ L+ G
Sbjct: 383 PNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFEL 442
Query: 49 --VCRRASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R + + PN + N A + +EM G++P+ ++ ++ +S+
Sbjct: 443 LNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSK 502
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
L+ + L M + + P + Y S++K L + GRIE+AEE ++ + G+ P T
Sbjct: 503 EGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFT 562
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ Y ++ A +L +QM L PN TY L+ + N + V I +
Sbjct: 563 YSGLIHGYCKTRNLEKADQLLQQMLNSGL-KPNADTYTDLLEGYFKSNDHEKVSSILQSM 621
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDM 275
GS D Y ++I L + + A E+ + GL+P + +L GL + +DM
Sbjct: 622 LGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADM 681
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 11/269 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y SLI G + RI+ AE + ++ +RG+ P+ TY+ L++G C+
Sbjct: 522 LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKT-------- 573
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A+++ +M G++P+ +++ +L Y +++ + L M G P
Sbjct: 574 --RNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNH 631
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y V++ L +E A +L E+ +NG+ P Y+ D A+ L +M
Sbjct: 632 IYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEM 691
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L P I YN LI F + R +++ + L + +YT LI G C+
Sbjct: 692 AKEGL-EPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGD 750
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+A + +M+++G+ P + L G
Sbjct: 751 ITDAFDLYKDMLDRGIAPDAFVYNVLATG 779
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 13/283 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y +I G C+ A L EMI G++PN Y L+ G +
Sbjct: 452 LPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSK--------- 502
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I A + + M + PD+ ++ ++ S + + + + ++++G+ P
Sbjct: 503 -EGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEF 561
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY+ ++ C +E A++LL +M+ +G+ P+A+TY + Y D + + M
Sbjct: 562 TYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSM 621
Query: 181 -KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
D P+ H Y I+I M++ + V+ + L DL Y+ LI GLC+
Sbjct: 622 LGSGD--KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMA 679
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++A EM ++GL P V + L G +S + R +
Sbjct: 680 DMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNV 722
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 13/300 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y+ LI+G+CK ++ A++ L +M+ G++PN TY LL G + +
Sbjct: 557 VPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFK------SND 610
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK + M G +PD + IV+ SR+ +++ L +++ G+ P +
Sbjct: 611 HEKV----SSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 666
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y+S++ LC +E A LL EM + G+ P YN + D + A ++ +
Sbjct: 667 IYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 726
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L +PN TY LI + +++ + + D Y +L G +
Sbjct: 727 LAKGL-LPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAAD 785
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR-TWRRLKKKLDEESITFGSEFQN 299
++A EM +G F TL RG + L+ T + L +D E + +N
Sbjct: 786 LEQALFLTEEMFNRG-YAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVEN 844
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 29/261 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ +Y+SLI G CK+ ++ A L EM + G+EP +V YN L++G CR
Sbjct: 662 VPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD------ 715
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A VFD + +G+ P+ +++ ++ + + D M ++GI P
Sbjct: 716 ----ISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAF 771
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y + +E A L EM G + ++ + + R KL M
Sbjct: 772 VYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVM 830
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-DLDSYTMLIHGLCEKQ 239
+ ++ VPN T +I F ++ ++ ++ + D +++L
Sbjct: 831 MDREI-VPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLL-------- 881
Query: 240 KWKEACQYFVEMIEKGLLPQK 260
F +MI KGL+P K
Sbjct: 882 --------FTDMINKGLIPPK 894
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 126/303 (41%), Gaps = 46/303 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + L+ + + +++ + G M G+ P+V TY+ L C+
Sbjct: 208 PTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCK---------- 257
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+KVF+EMR R + ++++++ R+ + + M + G+ P T
Sbjct: 258 ARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFT 317
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GR+++A+ LL EM +G+ P+ Y + A A + +M
Sbjct: 318 YGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMI 377
Query: 182 ED--------------DLCV--------------------PNIHTYNILI-GMFMALNRM 206
LC P+ TY+ L+ G F ++
Sbjct: 378 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDK- 436
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D E+ N ++ S + + +Y ++I+GLC+ + KEA EMI +GL P + L
Sbjct: 437 DGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPL 496
Query: 267 YRG 269
G
Sbjct: 497 IIG 499
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 5/241 (2%)
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
++R A +V M G+ P + +L RA +L FM+ GI P V TY+
Sbjct: 190 SVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYS 249
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
+ ++ C + A+++ EM R + + TYN A +M +
Sbjct: 250 TFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDY 309
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
L P+ TY L+ R+ + + + + S L ++ Y L+ G ++ K E
Sbjct: 310 GLS-PDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAE 368
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFK 303
A EMI G+ P K+ ++ L RGL + L KL E I G + +
Sbjct: 369 AFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGR----ASKLLNEMIKVGHRPDTFTYH 424
Query: 304 P 304
P
Sbjct: 425 P 425
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 140/330 (42%), Gaps = 62/330 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y S+I G CK+ + A L +MI R PN VTYN L++ +C+ +
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 62 EKTI-------------------------RNAEKVFDEMRVRGIEPD------------- 83
+ + R A ++F+EMR +G EPD
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 84 ----------------------VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
V +++ ++ + +A+K + + + + M+ G+ T
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC R+EDA +L+ +M+ G P TYN + D A + + M
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P+I TY LI R+++ ++ ++ + L +Y +I GL K+K
Sbjct: 568 SNG-CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Query: 242 KEACQYFVEMIEKG-LLPQKVTFETLYRGL 270
EA F EM+E+ P V++ ++RGL
Sbjct: 627 TEAINLFREMLEQNEAPPDAVSYRIVFRGL 656
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 134/265 (50%), Gaps = 12/265 (4%)
Query: 10 LIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
+++G+CK R++ A F+ EM + G P+ T+N L+NG+C+ +++A
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH----------VKHA 314
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
++ D M G +PDV +++ V+ + + + +++ L+ M + P TY +++
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC ++E+A EL + G+ P T+N + ++ AM+L+ +M+ C P
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEP 433
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
+ TYN+LI + ++D + ++ S + +Y LI G C+ K +EA + F
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQS 273
EM G+ VT+ TL GL +S
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKS 518
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 131/297 (44%), Gaps = 52/297 (17%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y +LI G+CK N+ AE EM GV N VTYN L++G+C+
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK----------S 518
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ + +A ++ D+M + G +PD +++ +L + R + + D + M G P + TY
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ LC GR+E A +LL + G++ + YN + ++ A+ L+R+M E
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ-KW 241
+ P D SY ++ GLC
Sbjct: 639 QNEAPP-----------------------------------DAVSYRIVFRGLCNGGGPI 663
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL------KKKLDEESIT 292
+EA + VE++EKG +P+ + L GL+ M T +L K + EE ++
Sbjct: 664 REAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVS 720
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 138/295 (46%), Gaps = 10/295 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ K +T+++ G+ + +D A R +M+E G + V+ NV+++G C+ +
Sbjct: 221 VPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALN 280
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F + + N + F PD +F+ +++ +A + +++ ++ M ++G P V
Sbjct: 281 FIQEMSNQDGFF---------PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY SV+ LC G +++A E+L +M+ SP+ TYN A +L R +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +P++ T+N LI + E++ ++ D +Y MLI LC K K
Sbjct: 392 TSKGI-LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
EA +M G +T+ TL G +++ R + +++ ++ S
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 130/322 (40%), Gaps = 47/322 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y ++ N + + E +M G++P+V T+NVL+ +CR L P
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP---- 207
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL----------------- 104
A + ++M G+ PD +F+ V+ Y +L
Sbjct: 208 ------AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVS 261
Query: 105 ---------------DKLNFMKE----KGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
D LNF++E G P T+ ++V LC G ++ A E++ M
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
++ G P TYN + A+++ QM D C PN TYN LI N+
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD-CSPNTVTYNTLISTLCKENQ 380
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
++ E+ + + D+ ++ LI GLC + + A + F EM KG P + T+
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 266 LYRGLIQSDMLRTWRRLKKKLD 287
L L L + K+++
Sbjct: 441 LIDSLCSKGKLDEALNMLKQME 462
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 15/272 (5%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
E G++P+ YN +LN + SL E I +A+ M V GI+PDV++F++++
Sbjct: 147 EFGLKPDTHFYNRMLNLLVDGNSLKLVE-----ISHAK-----MSVWGIKPDVSTFNVLI 196
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
RAH+ + ++ L M G+ P T+T+V++ G ++ A + +MV G S
Sbjct: 197 KALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCS 256
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
S + N + A+ ++M D P+ +T+N L+ + E
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
I + + D+ +Y +I GLC+ + KEA + +MI + P VT+ TL L
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 272 QSDMLRTWRRLKKKLDEESI-----TFGSEFQ 298
+ + + L + L + I TF S Q
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 123/270 (45%), Gaps = 8/270 (2%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV +Y LI + ++ +++ AE + EM ERG++PNV TYN L+ G P +F
Sbjct: 208 NVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEA---KPKRQFV 264
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
AE + +EM G+ PDV +F+++L Y + + N MK +G+ P +Y
Sbjct: 265 V----AEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSY 320
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ E A + + GV+P+ ETY YR D +++ MK
Sbjct: 321 TALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKV 380
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ CV TY ++ F R R++ K DL Y ML++ +
Sbjct: 381 EG-CVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHV 439
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+A +EM G LP T+ TL G ++
Sbjct: 440 KASDILLEMKTAGFLPDSFTYCTLIYGFLR 469
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 134/289 (46%), Gaps = 21/289 (7%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V +Y +LI NR D+ + V P+ VT++VL+N +
Sbjct: 104 SVHVYNTLITCLTNCNRYDL--ELYHNLAFYEVFPDSVTFSVLMNSAVKGGG-------- 153
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+++ ++ +M RGI P V+ F + + A + + +L M++ + V Y
Sbjct: 154 -SLKEVWALYQDMVQRGISPSVSVFGTFIKAFCDAGRLKEALLITTEMEKLNVPFNVVIY 212
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY---RGRKDANGAMKLYRQ 179
++ G++E+AE L+ EM G+ P+ TYN Y + ++ A L +
Sbjct: 213 NILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEE 272
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ L P++ T+ +L+G + + +++N +K + + SYT LI+ E++
Sbjct: 273 MEASGL-YPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERR 331
Query: 240 KWKEACQYFVEMIEK-GLLPQKVTFETL---YRGLIQSDMLRT-WRRLK 283
++A + F EMI K G+ P T+ L YR +M++ W+ +K
Sbjct: 332 CPEKAARAF-EMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMK 379
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 10/179 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT+LI + + + A R + ++GV P V TY LL+ R L
Sbjct: 315 PNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLE----- 369
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ V+ M+V G ++ +L + + + + + D + K +G P +
Sbjct: 370 -----MVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMV 424
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ GR A ++L EM G P + TY + +D A+K +R+M
Sbjct: 425 YNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYCTLIYGFLRVRDQTKALKYHREM 483
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 96/240 (40%), Gaps = 44/240 (18%)
Query: 69 EKVFDEMR-VRGIEP---DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
E+V R VR EP D SF+I+ R P +L + + +V Y +
Sbjct: 51 EQVLSFFRWVRLHEPCLCDPRSFTILFTFLGRMAMPDQALVFFGMLPKDKQFHSVHVYNT 110
Query: 125 VVKCLCSC----------------------------------GRIEDAEELLGEMVRNGV 150
++ CL +C G +++ L +MV+ G+
Sbjct: 111 LITCLTNCNRYDLELYHNLAFYEVFPDSVTFSVLMNSAVKGGGSLKEVWALYQDMVQRGI 170
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP-NIHTYNILIGMFMALNRMDMV 209
SPS + F K + A+ + +M++ L VP N+ YNILI + + +++
Sbjct: 171 SPSVSVFGTFIKAFCDAGRLKEALLITTEMEK--LNVPFNVVIYNILIDAYGRVGQLEEA 228
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCE---KQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ + ++ +Y LI G E K+++ A EM GL P VTF L
Sbjct: 229 EGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTML 288
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 139/284 (48%), Gaps = 13/284 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V +Y ++ + +++D +M+ GV P T N+L+ G+C RF
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSG------RF 167
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +A +VFD+M V+G P+ SF I++ Y RA +L+ L+ M G+ P
Sbjct: 168 E----DAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVI 223
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C GR E+AE L+ M +G+ P T+N A +++R M+
Sbjct: 224 YNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQ 283
Query: 182 EDD---LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
D+ L PNI T+N+++ F ++ + + +K + ++L+SY + + GL
Sbjct: 284 IDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRN 343
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
K EA EM++KG+ P +F T+ GL ++ ++ R +
Sbjct: 344 GKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMI 387
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 128/271 (47%), Gaps = 14/271 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y+ +I G CK R+D A + EM+ + + P+ + Y+ ++ C+
Sbjct: 525 LPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGK------ 578
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSF-SIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
I +A +V +M RG + ++ S++L + S+ ++ L+ MKEKGI P +
Sbjct: 579 ----ISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEI-YGLLDDMKEKGITPNI 633
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY +++ CLC GRI+DA LL EM++ G+SP+ ++ K + D +++
Sbjct: 634 CTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEI 693
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+C Y+++ + + +E+++ L Y LI LC+ +
Sbjct: 694 ALS--ICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDE 751
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ A +MI+KG +F + GL
Sbjct: 752 MLENASDILHKMIDKGYRFDPASFMPVIDGL 782
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 34/295 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y++L++G C ++ A L EM+ RG PN T N+LL+ + +
Sbjct: 398 PDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWK---------- 447
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFM----------- 110
E I AEK+ +M R + D + +IV+ ++ K +++ + M
Sbjct: 448 EGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNL 507
Query: 111 ------------KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
K P + TY+ ++ LC GR+++A + EMV + P + Y+
Sbjct: 508 GNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYD 567
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
F + + A ++ + M E C ++ TYN LI + N++ + + + +K
Sbjct: 568 TFIHSFCKHGKISSAFRVLKDM-EKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKE 626
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ ++ +Y +I LCE + K+A EM++KG+ P +F L + ++
Sbjct: 627 KGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKA 681
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 124/291 (42%), Gaps = 23/291 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + +++ G CK I A +G MI G+ P+ VTY+ LL+G C
Sbjct: 363 PNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGK------- 415
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + EM RG P+ + +I+LH + + + L M E+ T
Sbjct: 416 ---VLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVT 472
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
V+ LC G++++A E++ M +G + N F G D++ K
Sbjct: 473 CNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFI----GLVDSSSNGKK----- 523
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C+P++ TY+I+I R+D R+ + + G L D Y IH C+ K
Sbjct: 524 ----CLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKI 579
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + +M ++G T+ +L GL + + L + E+ IT
Sbjct: 580 SSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGIT 630
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 150/374 (40%), Gaps = 88/374 (23%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PN +Y +LI +C+ R + AER + M E G+ P+VVT+N ++ +C +
Sbjct: 219 PNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRI 278
Query: 56 -------------HPN--------ERF--EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
PN E F E + A+ + + M+ G ++ S++I L
Sbjct: 279 FRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLL 338
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
R K + L M +KGI P + ++ +V+ LC G I DA ++G M+ +G+ P
Sbjct: 339 GLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGP 398
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM------ 206
TY+ A + +M C PN +T NIL+ R+
Sbjct: 399 DTVTYSTLLHGCCSTGKVLKANNILHEMMRRG-CSPNTYTCNILLHSLWKEGRIFEAEKL 457
Query: 207 ---------------------------------DMVREIWNH-------VKGSELGL--- 223
++V +W H + S +GL
Sbjct: 458 LQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDS 517
Query: 224 ---------DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
DL +Y+++I+GLC+ + EA + F+EM+ K L P + ++T +
Sbjct: 518 SSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHG 577
Query: 275 MLRTWRRLKKKLDE 288
+ + R+ K +++
Sbjct: 578 KISSAFRVLKDMEK 591
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 153/343 (44%), Gaps = 52/343 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFL-GEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
PN +Y +LI G+ R + A+ L M+ G EP+ T+N++++G+C++ L
Sbjct: 334 PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYL----- 388
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A + DEM +G EP+V +++I++ + + + + +N M KG+
Sbjct: 389 -----VSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTV 443
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ LC G+I+DA ++ GEM G P T+N A+ LYR M
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDM 503
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK----------------------- 217
+ + + N TYN LI F+ L + ++ ++
Sbjct: 504 LLEGV-IANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGA 562
Query: 218 ------------GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
G E+ ++S +LI+ C K +A Q+ +MI++GL P VT+ +
Sbjct: 563 TEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNS 622
Query: 266 LYRGLIQ----SDMLRTWRRLKKK-LDEESITFGSEFQNYHFK 303
L GL + + L + L+ K + +++T+ + Y ++
Sbjct: 623 LINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYE 665
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 148/332 (44%), Gaps = 32/332 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + +I G CK + A FL EM+++G EPNV+TY +L++G C++ +
Sbjct: 370 PDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKV 429
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ I++A +++ EM +G +PD+ +F+ +++ +
Sbjct: 430 VNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCK 489
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + +L M +G+ TY +++ I+ A++L+GEM G T
Sbjct: 490 NDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNIT 549
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN K + L QM +++ P+I++ NILI F +++ + +
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEI-FPSINSCNILINSFCRTGKVNDALQFLRDM 608
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL-----YRGLI 271
L D+ +Y LI+GLC+ +++EA F + KG+ P VT+ TL Y GL
Sbjct: 609 IQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLF 668
Query: 272 QSDMLRTWRRLKKKLDEESITFGSEFQNYHFK 303
++ + IT+ S NY K
Sbjct: 669 NDACQLLFKGVSNGFIPNEITW-SILINYFVK 699
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 125/275 (45%), Gaps = 16/275 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +Y LI+ + NR++ A + L EM G EP+V T+N +++G+C+ +H
Sbjct: 232 VPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIH---- 287
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+ D M +R D ++H R K +D+ M K P
Sbjct: 288 ------EAAKLHDRMLLRDFTADALIQGYLMHGLCRMGK----VDEARAMLSKIPNPNTV 337
Query: 121 TYTSVVKCLCSCGRIEDAEELL-GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++ GR E+A++LL MV G P A T+N + A++ +
Sbjct: 338 LYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDE 397
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + PN+ TY ILI F + ++ N + L L+ Y LI LC+
Sbjct: 398 MVKKGF-EPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDG 456
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
K ++A Q + EM KG P TF +L GL ++D
Sbjct: 457 KIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKND 491
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 128/273 (46%), Gaps = 13/273 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y LI CK +I A + GEM +G +P++ T+N L+ G+C+ N++ E
Sbjct: 441 NTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCK------NDKME 494
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP-TVAT 121
+ A ++ +M + G+ + +++ ++H + R Q + + M+ +G CP T
Sbjct: 495 E----ALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRG-CPLDNIT 549
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++K LC G E L+ +M + PS + N + N A++ R M
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L P+I TYN LI + R ++N ++ + D +Y LI C + +
Sbjct: 610 QRGL-TPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLF 668
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ACQ + + G +P ++T+ L ++++
Sbjct: 669 NDACQLLFKGVSNGFIPNEITWSILINYFVKNN 701
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 131/303 (43%), Gaps = 58/303 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-------RAS 54
P+V+ + +I+G CK RI A + M+ R + + L++G+CR RA
Sbjct: 268 PDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAM 327
Query: 55 L----HPNERFEKTIRNA-----------EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK 99
L +PN T+ N + ++ M + G EPD +F+I++ +
Sbjct: 328 LSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGY 387
Query: 100 PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC 159
+L+ L+ M +KG P V TYT ++ C G E+A +++ M G+S + YNC
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNC 447
Query: 160 FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219
A+++Y +M C P+I+T+N
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKG-CKPDIYTFN------------------------- 481
Query: 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 279
LI+GLC+ K +EA + +M+ +G++ VT+ TL ++ ++++
Sbjct: 482 ----------SLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQA 531
Query: 280 RRL 282
+L
Sbjct: 532 DKL 534
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 122/298 (40%), Gaps = 22/298 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P K Y ++ N +A +M+ RG+ P V T+ V++ C NE
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMV-----NE-- 215
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A + +M G P+ + +++H S ++ ++ L M G P V T
Sbjct: 216 ---VDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQT 272
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ V+ LC GRI +A +L M+ + A + A + ++
Sbjct: 273 FNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP 332
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIW--NHVKGSELGLDLDSYT--MLIHGLCE 237
PN YN LI ++ R + +++ N V G + D++T ++I GLC+
Sbjct: 333 N-----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIA---GFEPDAFTFNIMIDGLCK 384
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
K A ++ EM++KG P +T+ L G + ++ + + ++ +
Sbjct: 385 KGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNT 442
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 5/203 (2%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+ D V EP S+++VL + + P+++ + M +GI PTV T+ V+K C
Sbjct: 152 LLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFC 211
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
++ A LL +M ++G P++ Y N AMKL +M C P++
Sbjct: 212 MVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMG-CEPDV 270
Query: 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250
T+N +I R+ ++ + + + D L+HGLC K EA
Sbjct: 271 QTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA----RA 326
Query: 251 MIEKGLLPQKVTFETLYRGLIQS 273
M+ K P V + TL G + S
Sbjct: 327 MLSKIPNPNTVLYNTLINGYVVS 349
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 2/219 (0%)
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP-QLSLDKLNFMKEKGICPTVATYTSVVK 127
+K+ +M+ G + F +++ Y +A P Q + L+ PT +Y V++
Sbjct: 114 DKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLE 173
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
L + + A + +M+ G+SP+ T+ K + + + A L R M + CV
Sbjct: 174 ILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHG-CV 232
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
PN Y +LI NR++ ++ + D+ ++ +IHGLC+ + EA +
Sbjct: 233 PNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKL 292
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
M+ + + L GL + + R + K+
Sbjct: 293 HDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKI 331
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 12/273 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y +L+ G K + A L MIE G+ P+V+T+N +L+G+C+
Sbjct: 471 PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCK---------- 520
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ I +A VF RG P+V ++S ++ S+ K +L L M E G T
Sbjct: 521 EQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVT 580
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++VV L GR+EDA +L +M G P A TYN + R+ A+ L R+M
Sbjct: 581 YSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREML 640
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E P++ TY L R D EI +++ + +Y+ ++ GLC+ +
Sbjct: 641 EAGF-HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRV 699
Query: 242 KEACQYFVEMI-EKGLLPQKVTFETLYRGLIQS 273
EA YF +M ++ + P + + L GL ++
Sbjct: 700 TEALGYFEKMARDEVVAPHVIAYSALIDGLCKA 732
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 20/298 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y++LI G CK RID A FL MI G P+VVT+++L+NG+C
Sbjct: 717 PHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGR------- 769
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I ++F M RG + D+ +++ +++ Y + + L MK GI T
Sbjct: 770 ---IDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVT 826
Query: 122 YTSVVKCLCSCGRIEDAEEL---LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ V+K LC RI++A + E R+ +S YN + + A++L R
Sbjct: 827 HGIVIKALCGNDRIDEAVSYFHSIPEDCRDEIS-----YNTLITSLVASRRSEQALELLR 881
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M D + ++ G+F A ++ ++ ++ DL +YT++I GL +
Sbjct: 882 AMVADGGSPDACNYMTVMDGLFKA-GSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKA 940
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKKKLDEESITFGS 295
++ AC YF EM+ K L P + + +L ++D + W+ L+ E +IT S
Sbjct: 941 KQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRSSGIEPTITMYS 998
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 14/274 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +LI G+ K R+ A L EM+E G P+VVTY L +G+CR R
Sbjct: 610 LPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSG------R 663
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFM-KEKGICPTV 119
F++ + ++ D M RG P+ ++S ++ +A + +L M +++ + P V
Sbjct: 664 FDEAV----EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 719
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y++++ LC GRI++A E L M+R G P T++ + ++L+
Sbjct: 720 IAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCG 779
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E C +I+ YN +I + + +K + + ++ ++I LC
Sbjct: 780 MAERG-CKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGND 838
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ EA YF + E ++++ TL L+ S
Sbjct: 839 RIDEAVSYFHSIPED--CRDEISYNTLITSLVAS 870
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 149/296 (50%), Gaps = 23/296 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V+++T L++ C++ R+D A F +++ G P+ VTYN +++G L+ R
Sbjct: 138 VPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDG------LYKAGR 191
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E A V + P V +F+I + S+A + + + M + G+ P
Sbjct: 192 LEA----AGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTV 247
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEM-VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY +++ LC G+++ A LL + + G+ + + + +R + A++L +
Sbjct: 248 TYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEE----AIQLLKA 303
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M CVPN+ +N L+ R+D E+++ +K S D+ +Y +L+ GLC+ +
Sbjct: 304 MP----CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLR 359
Query: 240 KWKEACQYFVEMIEK--GLLPQKVTFETLYRGLIQSDML-RTWRRLKKKLDEESIT 292
+ EA ++ VE++ + G P VTF TL +GL + + + W ++ + E I+
Sbjct: 360 RIPEAYRH-VELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGIS 414
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 132/307 (42%), Gaps = 52/307 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y+++I G C+ N +D + L EM RG PN VTYN L+N + +
Sbjct: 34 PTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGR------- 86
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + + M G P++ +F +++ + + + + ++ M ++G P V
Sbjct: 87 ---AKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEI 143
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDA--------- 170
+T ++ LC GR+++A +++ G +P A TYN GR +A
Sbjct: 144 HTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLA 203
Query: 171 ------------------------NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
GA + + M + + PN TY+ LI ++
Sbjct: 204 ESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVS-PNTVTYDALIDGLCKAGKL 262
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D+ + K S+ G + +++ L+HGLC+ + +EA Q M +P V F +L
Sbjct: 263 DIALGLLRD-KNSQAG--MFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSL 316
Query: 267 YRGLIQS 273
GL Q+
Sbjct: 317 MNGLCQA 323
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 145/343 (42%), Gaps = 63/343 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC---------- 50
+PNV + SL+ G C+ R+D A M E G +V+TYN+LL G+C
Sbjct: 307 VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYR 366
Query: 51 ------RRASLHPNERFEKT----------IRNAEKVFDEM-RVRGIEPDVTSFSIVLHV 93
R PN T + A +V++ M V GI P+ +++ +L
Sbjct: 367 HVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEG 426
Query: 94 YSRA--------------------------HKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
+A H P++ +F+ + PT+ TY ++V
Sbjct: 427 LCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEV-----DFLMVQVCRPTLVTYNTLVT 481
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
L G + DA LL M+ +G+SP T+N + A ++++ E C
Sbjct: 482 GLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG-CR 540
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEKQKWKEAC 245
PN+ TY+ LI + +MD ++ K ELG ++ Y+ ++ GL + + ++A
Sbjct: 541 PNVVTYSTLIDGLSKMAKMDEALQLL--AKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 598
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+M + G LP VT+ TL G + LR L +++ E
Sbjct: 599 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 641
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 124/288 (43%), Gaps = 11/288 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI G CK R+ A + I+ G P VVTY+ +++G+CR + +
Sbjct: 4 YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCR----------DNEVD 53
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
K+ +EM RG P+ +++ +++ + + + L M G P + T+ ++
Sbjct: 54 KGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLII 113
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
K LC G IE A ++ EMV G P E + + A ++Q+
Sbjct: 114 KGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGF- 172
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+ TYN ++ R++ + + S + ++T+ + GL + A +
Sbjct: 173 TPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYE 232
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
+F M + G+ P VT++ L GL ++ L L + + ++ F
Sbjct: 233 FFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFA 280
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 14/211 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI R + A L M+ G P+ Y +++G+ + S
Sbjct: 860 YNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEV--------- 910
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A K+ EMR RG PD+ +++I++ S+A + L+ D M K + P Y+S++
Sbjct: 911 -AAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLI 969
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C +++DA +LL +G+ P+ Y+ + + A+++ R+MK + C
Sbjct: 970 DAFCKADKVDDAWKLLRS---SGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKN-C 1025
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
P IH + L ++A R+D ++ N ++
Sbjct: 1026 EPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +++ G K ++A + L EM RG P++ TY ++++G+ +
Sbjct: 890 PDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSK---------- 939
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + A F+EM + ++PD +S ++ + +A K D ++ GI PT+
Sbjct: 940 AKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVD---DAWKLLRSSGIEPTITM 996
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+++V LC + A E++ EM P + Y + A+KL ++
Sbjct: 997 YSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 141/294 (47%), Gaps = 17/294 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ Y ++ CK ++D A+ + EM G+ P+VVTY+ L++G+C+ L
Sbjct: 337 PNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLD----- 391
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +EM G+ PD + + +L+ S+A K +L L MK +G P + T
Sbjct: 392 -----RACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GRI++A L +MV +P +Y A GA ++++M
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMV 506
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + +P+ Y+ L+ D+ E+ +K S D + M++ GLC+ K
Sbjct: 507 KRGV-LPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVLDGLCKAGKA 562
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
++AC+ M + G T+ ++ GL + + R+L +D+ S T S
Sbjct: 563 EDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQL---VDDASETHTS 613
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 29/292 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + SL+ G C R+ A M + G EPNV++Y+ LL+G+C+ L
Sbjct: 141 VPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLD---- 196
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++++EM + PD+ +++ + +A++ + D M KG
Sbjct: 197 ------EACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAV 250
Query: 121 TYTSVVKCLCSCGRIEDAE-ELLGEMVRNGV----------------SPSAETYNCFFKE 163
+++V+ LC G E+A+ +++ + R+G+ PSAE +N
Sbjct: 251 AFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHA 310
Query: 164 YRGRKDANGAMKLYRQMK--EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
K + L+++MK ++ C PN+ TYNI++ ++D +E+ N + L
Sbjct: 311 VCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGL 370
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
D+ +Y+ L+ GLC+ K AC EM ++G+ P T ++ L ++
Sbjct: 371 SPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 139/320 (43%), Gaps = 46/320 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--ASLHPN 58
+P++ YTS + G CK NR+ A +M+ +G + + V ++ ++ +C++ A N
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQN 270
Query: 59 ERFEKTIRN-----AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK-------------- 99
+ E R+ A K F+EM R P F+ ++H ++ +
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330
Query: 100 ------PQL--------------SLDK----LNFMKEKGICPTVATYTSVVKCLCSCGRI 135
P L LD+ +N M G+ P V TY+++V LC G++
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195
+ A +LL EM + GV P + T + A+ MK P++ TYN
Sbjct: 391 DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARG-STPDLVTYNT 449
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
L+ R+D + ++ D+ SYT++I LC + A F EM+++G
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509
Query: 256 LLPQKVTFETLYRGLIQSDM 275
+LP V + +L GL ++ +
Sbjct: 510 VLPDTVLYHSLLDGLARNGL 529
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 113/211 (53%), Gaps = 1/211 (0%)
Query: 65 IRNAEKVFDEM-RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
I ++FD + R +G + V +++ L ++A+ QL+ +K M+ +G P TY+
Sbjct: 18 ISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYS 77
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
V++ LC G ++ A+ELLG++ +GV + TY+ + A+++++ M
Sbjct: 78 IVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSG 137
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
CVP++ T+N L+ + RM ++ ++ + ++ SY+ L+ GLC+ + E
Sbjct: 138 GGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDE 197
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
AC+ + EM+EK +P V + + GL +++
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKAN 228
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 32 ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
++G + +V TYN L+ + + + +EK F +M+ RG PD ++SIVL
Sbjct: 31 QKGYQHSVFTYNCFLDALAKANA--GQLAYEK--------FQQMQRRGYPPDDFTYSIVL 80
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR-NGV 150
+A + + + L ++E G+ V TY+ V+ C R++DA E+ M G
Sbjct: 81 RGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGC 140
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
P T+N K + + A L+ M + C PN+ +Y+ L+ R+D
Sbjct: 141 VPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAG-CEPNVISYSTLLDGLCKAGRLDEAC 199
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+W + DL +YT + GLC+ + EAC +M+ KG V F T+
Sbjct: 200 RLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 142/343 (41%), Gaps = 46/343 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y+ ++ G CK +D A+ LG++ E GV+ NV+TY+V+++G C+ + +
Sbjct: 71 PDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEI 130
Query: 62 EKTIRN--------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
KT+ + A +F+ M G EP+V S+S +L
Sbjct: 131 FKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLC 190
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A + + M EK P + YTS V LC R+ +A + +MV G A
Sbjct: 191 KAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAV 250
Query: 156 TYNCFFKEYRGRKDANGAMK-----LYRQMKEDDLC-----------VPNIHTYNILIGM 199
++ + A A L R D+ C P+ +N LI
Sbjct: 251 AFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHA 310
Query: 200 FMALNRMDMVREIWNHVKGSE---LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
R+ ++ +K + +L++Y +++ LC+ ++ EA + EM GL
Sbjct: 311 VCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGL 370
Query: 257 LPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
P VT+ L GL + L L +++ +E + F F +
Sbjct: 371 SPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGV-FPDSFTD 412
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 37/305 (12%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y + K N +A +M RG P+ TY+++L G+C+ L
Sbjct: 37 SVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD------ 90
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVAT 121
A+++ ++R G++ +V ++S+V+ +A + +L+ M G C P V T
Sbjct: 91 ----KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVT 146
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++K LCS R+ +A L M + G P+ +Y+ + A +L+ +M
Sbjct: 147 FNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV 206
Query: 182 EDDLCVPNIHTYNILIGMFMALNRM----DMVREIWNHVKGSEL---------------G 222
E CVP++ Y + NR+ D R++ KGS+ G
Sbjct: 207 EKS-CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT--KGSKADAVAFSTVIGILCKKG 263
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRT 278
++ +I LC EAC+ F EMI + P F TL + +S D +
Sbjct: 264 HAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323
Query: 279 WRRLK 283
++R+K
Sbjct: 324 FQRMK 328
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 10/265 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +T+LI + + + + L M + V P+++TYN ++N C R L E
Sbjct: 179 PSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINS-CARGGLDWEELL 237
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+F +MR GI+ D+ +++ +L +R + M E GI P + T
Sbjct: 238 --------GLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITT 289
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ +V+ R+E ELL EM G P +YN + + AM ++RQM+
Sbjct: 290 YSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQ 349
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
CVPN TY+IL+ ++ R D VR+++ +K S + +Y +LI+ E +
Sbjct: 350 GAG-CVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYF 408
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
KE F +M+E+ + P T+E L
Sbjct: 409 KEVVTLFHDMVEENVEPNMETYEGL 433
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 16/234 (6%)
Query: 36 EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+PN Y +++ GV R L + +++FDEM G+ P V SF+ +++ Y
Sbjct: 143 KPNEHIYTIMI-GVLGREGL---------LEKCQEIFDEMPSHGVAPSVFSFTALINAYG 192
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLG---EMVRNGVSP 152
R + + SL+ L+ MK++ + P++ TY +V+ C+ G + D EELLG +M G+
Sbjct: 193 RNGQYKSSLELLDRMKKERVSPSILTYNTVINS-CARGGL-DWEELLGLFAQMRHEGIQA 250
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
TYN R + A ++R M E + +P+I TY+ L+ F LNR++ V E+
Sbjct: 251 DIVTYNTLLSACARRGLGDEAEMVFRTMNEGGI-LPDITTYSYLVETFGKLNRLEKVSEL 309
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ D+ SY +L+ + KEA F +M G +P T+ L
Sbjct: 310 LKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSIL 363
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 16/301 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y LI + + +M+E VEPN+ TY L+ C + LH
Sbjct: 390 PNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFA-CGKGGLH----- 443
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A+K+ M +G+ P +++ V+ Y +A + +L N M E G PTV T
Sbjct: 444 ----EDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVET 499
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+++ G +++E +L +M ++GV+ + +T+N + +R A+K Y +M
Sbjct: 500 YNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEM- 558
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P+ T ++ ++ ++ E + +K + + Y M++ + +W
Sbjct: 559 EKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRW 618
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK---KKLDEESITFGSEFQ 298
+A Q EM + + RG D W+ ++ +KL E + G F
Sbjct: 619 DDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDD--SNWQMVEYVFEKLKSEGCSLGVRFY 676
Query: 299 N 299
N
Sbjct: 677 N 677
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 130/302 (43%), Gaps = 31/302 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---- 56
+P++ Y+ L+ + K+NR++ L EM G P++ +YNVLL + S+
Sbjct: 284 LPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMG 343
Query: 57 -----------PNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
PN + N +F EM+V EP+ +++I+++V+
Sbjct: 344 VFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFG 403
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + M E+ + P + TY ++ G EDA+++L M GV PS++
Sbjct: 404 EGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSK 463
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
Y + Y A+ + M E P + TYN LI MF I
Sbjct: 464 AYTGVIEAYGQAALYEEALVAFNTMNEVG-SKPTVETYNSLIQMFAKGGLYKESEAILLK 522
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL-----YRGL 270
+ S + + D++ +I + +++EA + +VEM + P + T E + + GL
Sbjct: 523 MGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGL 582
Query: 271 IQ 272
++
Sbjct: 583 VE 584
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 138/333 (41%), Gaps = 29/333 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAE--RFLGEMIERGVEPNVVTYNVLLNGVCRRA------ 53
P++ Y ++I C +D E +M G++ ++VTYN LL+ RR
Sbjct: 214 PSILTYNTVINS-CARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAE 272
Query: 54 ---------SLHPN--------ERFEKTIR--NAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
+ P+ E F K R ++ EM G PD+TS++++L +
Sbjct: 273 MVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAH 332
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+++ + ++ M+ G P ATY+ ++ GR +D +L EM + P+A
Sbjct: 333 AQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNA 392
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TYN + + L+ M E+++ PN+ TY LI + ++I
Sbjct: 393 ATYNILINVFGEGGYFKEVVTLFHDMVEENV-EPNMETYEGLIFACGKGGLHEDAKKILL 451
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
H+ + +YT +I + ++EA F M E G P T+ +L + +
Sbjct: 452 HMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGG 511
Query: 275 MLRTWRRLKKKLDEESITFGSEFQNYHFKPYRR 307
+ + + K+ + + + N + +R+
Sbjct: 512 LYKESEAILLKMGQSGVARNRDTFNGVIEAFRQ 544
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 57/114 (50%)
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
S + FKE+ R D +++L++ M+ C PN H Y I+IG+ ++ +EI
Sbjct: 109 SLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEI 168
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++ + + + S+T LI+ ++K + + M ++ + P +T+ T+
Sbjct: 169 FDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTV 222
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 132/265 (49%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y S+I CK +D A L M++ GV P+ +TYN +++G C +S P E
Sbjct: 45 PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC--SSGQPKE-- 100
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +MR G+EPDV +++ ++ + + + + M ++G+ P + T
Sbjct: 101 ------AIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 154
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ + G + + LL MVRNG+ P+ ++ Y ++ AM ++ +M+
Sbjct: 155 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 214
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L PN TY +I + R++ + + L D Y LIH LC KW
Sbjct: 215 QQGLN-PNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 273
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
++A + F+EM+++G+ + F ++
Sbjct: 274 EKAEELFLEMLDRGICLSTIFFNSI 298
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 143/298 (47%), Gaps = 11/298 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I G+ K +D EM+++ + PNVVTYN ++ +C+
Sbjct: 10 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCK---------- 59
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+T+ A +V M G+ PD +++ ++H + + +P+ ++ L M+ G+ P V T
Sbjct: 60 AQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVT 119
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR +A ++ M + G+ P TY + Y + L M
Sbjct: 120 YNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMV 179
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN + ++IL+ + +++ +++ ++ L + +Y +I LC+ +
Sbjct: 180 RNGIH-PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRV 238
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
++A YF +MI++GL P + + +L L D L ++ + I + F N
Sbjct: 239 EDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFN 296
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 11/263 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y S+++G+C + A FL +M GVEP+VVTYN L++ +C+
Sbjct: 79 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC----- 133
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+FD M RG++PD+T++ +L Y+ L+ M GI P
Sbjct: 134 -----TEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 188
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++ +V ++E+A + +M + G++P+A TY AM + QM
Sbjct: 189 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 248
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L P+ YN LI ++ + E++ + + L + +I C++ +
Sbjct: 249 IDEGL-RPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 307
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
E+ + F M+ G+ P +T
Sbjct: 308 VIESVKLFDLMVRIGVKPDIITL 330
>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 138/271 (50%), Gaps = 12/271 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YT+LI G+CK ++ A++ + EM+ RG PN +TYN ++ G+C N R
Sbjct: 259 LPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCI------NGR 312
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ A+ + +MR+ G + +V++ +L K ++ L + E + P V
Sbjct: 313 VDE----AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 368
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y V+ C G+ ++A LL EM G+ P+ ++N F+ + + A+ L +QM
Sbjct: 369 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 428
Query: 181 KEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ D C+PN +YN +I G+ MA RM V ++ + + S LD Y+ L+ G CE+
Sbjct: 429 PQMD-CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEG 487
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ Q EM+ K + +F L + L
Sbjct: 488 NVENVMQIAHEMVTKKYVIGLESFSVLVKQL 518
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 138/288 (47%), Gaps = 24/288 (8%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMI-ERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
Y SL+ ++N I +AE F +++ E V P+V TY ++ G C+ I
Sbjct: 161 YNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMG----------MI 210
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA---HKPQLSLDKLNFMKEKGICPTVATY 122
NA+KVFD M V+ P++ +++ +++ + + +L D++ M + P TY
Sbjct: 211 ENAKKVFDVMTVK---PNLLAYNTMINGFCKKGDMESARLVFDRM--MSGEDCLPNHVTY 265
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYRQM 180
T+++ C G +E+A++ + EM+ G P+ TYN GR D A L +M
Sbjct: 266 TTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE--AKMLMAKM 323
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + N+ T+ ++ + + D +V + + D+ SY ++I+G C+ K
Sbjct: 324 RLNGF-KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGK 382
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
EA EM +GL P +F ++R L+++ L L K++ +
Sbjct: 383 SDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQ 430
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 26/172 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLL-----NGVCRRASLH 56
P+VK Y +I G+CKI + D A L EM RG++P V ++N + NG RA L
Sbjct: 365 PDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILL 424
Query: 57 ----------PNERFEKTI-----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
PN TI ++ E + D M G D T +S +L Y
Sbjct: 425 LKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYC 484
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147
+ + + M K + +++ +VK LC+ G++ +AE+L R
Sbjct: 485 EEGNVENVMQIAHEMVTKKYVIGLESFSVLVKQLCAKGKVTEAEKLFDTCSR 536
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T YT++ L S I A LL +N S + K Y R + A+ +
Sbjct: 91 TTPCYTAITDVLLSHSLISIAASLL----KNSNKLSDFFISKLIKAYGDRGNVKAAIFWF 146
Query: 178 RQMK--EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH-VKGSELGLDLDSYTMLIHG 234
Q K E+ C +++YN L+G+ + +N + + E ++ VK + + D+ +YT +I G
Sbjct: 147 HQAKQIENGAC---LYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRG 203
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR 280
C+ + A + F M K P + + T+ G + + + R
Sbjct: 204 YCKMGMIENAKKVFDVMTVK---PNLLAYNTMINGFCKKGDMESAR 246
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 140/307 (45%), Gaps = 19/307 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y L K +R+D +M V+P T+N+L++ +C L
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLE----- 170
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA +VFD+M +G +P+ S I++ Y RA +D L+ M+ G P
Sbjct: 171 -----NAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVA 225
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V+ LC G+ +AE+L+ +M G+SP T+NC A +++R M+
Sbjct: 226 YNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQ 285
Query: 182 EDD---LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
D+ L PN TYN+++ F + + R I++ +K SE L L SY + + GL
Sbjct: 286 IDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSET-LSLRSYNIWMLGLVRS 344
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITF 293
K EA EM EK + P ++ L GL + M R + + E +++T+
Sbjct: 345 GKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTY 404
Query: 294 GSEFQNY 300
+ Y
Sbjct: 405 STLLHGY 411
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 123/290 (42%), Gaps = 23/290 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y L++G CK A LG M E GV P+ VTY+ LL+G CRR
Sbjct: 364 PNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGK------- 416
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A V EM G P++ + +I+LH + + + D L M E+G T
Sbjct: 417 ---ILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVT 473
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++ LC G ++ A E++ M G + N F + R +
Sbjct: 474 CNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKK--------- 524
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C+P+ TY +IG + R+D ++ + G +L D + I+ C++ K
Sbjct: 525 ----CLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKL 580
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + EM +KG T+ +L +GL + + L ++ E I
Sbjct: 581 SSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGI 630
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 12/254 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I G CK+ R+D A++ L EMI + + P+ + ++ + C++ L
Sbjct: 526 LPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLS---- 581
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A +V EM +G + +++ ++ ++ ++ MKE+GI P V
Sbjct: 582 ------SAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVY 635
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ CL G+++DA LL EM++ G+SP+ T+ + D A +L+
Sbjct: 636 TYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIA 695
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
LC Y+ + +A +E++ L L Y LI LC+ K
Sbjct: 696 LS--LCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGK 753
Query: 241 WKEACQYFVEMIEK 254
+A +M++K
Sbjct: 754 LDDASFILHKMMDK 767
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 140/331 (42%), Gaps = 44/331 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMI---ERGV-EPNVVTYNVLLNGVCRRASLHP 57
P++ + I CK +I A R +M E G+ +PN VTYN++L G C
Sbjct: 256 PDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCS------ 309
Query: 58 NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
E A +FD M+ + S++I + R+ K + LN M EK I P
Sbjct: 310 ----EGMFEEARAIFDSMK-NSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKP 364
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ +Y +V LC G DA +LG M +GV+P TY+ Y R A +
Sbjct: 365 NLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVL 424
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
R+M + C PN++T NIL+ R ++ + GLD + +I+GLC+
Sbjct: 425 REMIQVG-CFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCK 483
Query: 238 KQKWKEACQY------------------FVEMIE-----KGLLPQKVTFETLYRGLIQSD 274
+A + F+++ + K LP +T+ T+ GL +
Sbjct: 484 AGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVG 543
Query: 275 MLRTWRR-----LKKKLDEESITFGSEFQNY 300
+ ++ + KKL +S+ F + NY
Sbjct: 544 RVDEAKKKLLEMIGKKLSPDSLIFDTFIYNY 574
>gi|302809819|ref|XP_002986602.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
gi|300145785|gb|EFJ12459.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
Length = 445
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 133/301 (44%), Gaps = 34/301 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +LI C RI A L M +RGV PN VTYN + G+ + L +E F
Sbjct: 81 PNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLL--DEAF 138
Query: 62 E-------------------------KTIRNAE--KVFDEMRVRGIEPDVTSFSIVLHVY 94
E K+ R E KV + M +R IEP++ + +++LH +
Sbjct: 139 ELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILTLNLILHAF 198
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+A +P+ +L + M E G CPT+ T+ ++++ C+ +++ A +LL M + P+
Sbjct: 199 CKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKLLETMAHSKCKPNF 258
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC--VPNIHTYNILIGMFMALNRMDMVREI 212
TY+ +++ A Q+ +C PN+ N + MD+
Sbjct: 259 VTYSIMVQKFAEMGRMVEARAFLEQLV---VCGYAPNLLVCNAYVAGLCKTGEMDLASRF 315
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ + +Y L+ G C+ + EA + EMI +G LP T+ L +GL
Sbjct: 316 LTVMAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCS 375
Query: 273 S 273
+
Sbjct: 376 A 376
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 123/287 (42%), Gaps = 14/287 (4%)
Query: 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK 63
V ++ ++ G+ + +D A+ L M +PN V+YN L++ +C
Sbjct: 51 VVLHNLMLKGFSEAGFVDEAKSHLHRM---DCKPNSVSYNTLIDALCSSGR--------- 98
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
I+ A + M RG+ P+ +++ + +A + + + M+ G T T+
Sbjct: 99 -IQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFN 157
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
VV+ LC GR ++A +++ M+ + P+ T N + A+ + M E
Sbjct: 158 PVVEFLCKSGRPDEACKVMETMLLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEM 217
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
C P I T+N L+ +F ++MD ++ + S+ + +Y++++ E + E
Sbjct: 218 GFC-PTIVTFNALLELFCNTDQMDSAAKLLETMAHSKCKPNFVTYSIMVQKFAEMGRMVE 276
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
A + +++ G P + GL ++ + R + EE
Sbjct: 277 ARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEG 323
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 16/244 (6%)
Query: 41 TYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPD--VTSFSIVLHVYSRAH 98
TY L++G C A+++ +E + G+ P V +++L +S A
Sbjct: 16 TYGTLVHGHCLAGEFD----------EAKRLVEEFKDTGMSPGSLVVLHNLMLKGFSEAG 65
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
+ L+ M K P +Y +++ LCS GRI++A E L M + GV+P+ TYN
Sbjct: 66 FVDEAKSHLHRMDCK---PNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYN 122
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
+ A +L M+ + + T+N ++ R D ++ +
Sbjct: 123 AMATGLGKAGLLDEAFELMGVMESAGFALTAV-TFNPVVEFLCKSGRPDEACKVMETMLL 181
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
+ ++ + +++H C+ + +EA M+E G P VTF L +D + +
Sbjct: 182 RNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDS 241
Query: 279 WRRL 282
+L
Sbjct: 242 AAKL 245
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 132/265 (49%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y S+I CK +D A L M++ GV P+ +TYN +++G C +S P E
Sbjct: 114 PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC--SSGQPKE-- 169
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +MR G+EPDV +++ ++ + + + + M ++G+ P + T
Sbjct: 170 ------AIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 223
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ + G + + LL MVRNG+ P+ ++ Y ++ AM ++ +M+
Sbjct: 224 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L PN TY +I + R++ + + L D Y LIH LC KW
Sbjct: 284 QQGLN-PNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
++A + F+EM+++G+ + F ++
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSI 367
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 143/298 (47%), Gaps = 18/298 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I G+ K E L +M+++ + PNVVTYN ++ +C+
Sbjct: 86 PDVVSYSTVINGFFK-------EGDLDKMLDQRISPNVVTYNSIIAALCK---------- 128
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+T+ A +V M G+ PD +++ ++H + + +P+ ++ L M+ G+ P V T
Sbjct: 129 AQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVT 188
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR +A ++ M + G+ P TY + Y + L M
Sbjct: 189 YNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMV 248
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN + ++IL+ + +++ +++ ++ L + +Y +I LC+ +
Sbjct: 249 RNGIH-PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRV 307
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
++A YF +MI++GL P + + +L L D L ++ + I + F N
Sbjct: 308 EDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFN 365
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 11/263 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y S+++G+C + A FL +M GVEP+VVTYN L++ +C+
Sbjct: 148 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC----- 202
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+FD M RG++PD+T++ +L Y+ L+ M GI P
Sbjct: 203 -----TEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 257
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++ +V ++E+A + +M + G++P+A TY AM + QM
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 317
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ L P+ YN LI ++ + E++ + + L + +I C++ +
Sbjct: 318 IDEGL-RPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 376
Query: 241 WKEACQYFVEMIEKGLLPQKVTF 263
E+ + F M+ G+ P +T
Sbjct: 377 VIESGKLFDLMVRIGVKPDIITL 399
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 26/280 (9%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE- 81
A E++ RG+ P+V +YN+LLNG+C E + A ++ M G +
Sbjct: 36 ARHVFDELLRRGI-PDVFSYNILLNGLCD----------ENRSQEALELLHIMADDGGDC 84
Query: 82 -PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
PDV S+S V++ + + + LDK M ++ I P V TY S++ LC ++ A E
Sbjct: 85 PPDVVSYSTVINGFFK----EGDLDK---MLDQRISPNVVTYNSIIAALCKAQTVDKAME 137
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
+L MV++GV P TYN + A+ ++M+ D + P++ TYN L+
Sbjct: 138 VLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGV-EPDVVTYNSLMDYL 196
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
R R+I++ + L D+ +Y L+ G K E M+ G+ P
Sbjct: 197 CKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 256
Query: 261 VTFETLY-----RGLIQSDMLRTWRRLKKKLDEESITFGS 295
F L + ++ ML + ++ L+ ++T+G+
Sbjct: 257 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT 296
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 35/202 (17%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM--------------- 180
EDA + E++R G+ P +YN + A++L M
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 181 -------KEDDL-------CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226
KE DL PN+ TYN +I +D E+ + S + D
Sbjct: 93 TVINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCM 152
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL---- 282
+Y ++HG C + KEA + +M G+ P VT+ +L L ++ R++
Sbjct: 153 TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212
Query: 283 -KKKLDEESITFGSEFQNYHFK 303
K+ L + T+G+ Q Y K
Sbjct: 213 TKRGLKPDITTYGTLLQGYATK 234
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 148/316 (46%), Gaps = 27/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER- 60
P+V Y ++I G+CK +++ + +L EMI +G++PNV TY ++G CR + ER
Sbjct: 510 PDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERS 569
Query: 61 ----FEKTIR-----------------NAEKVFDEMRV---RGIEPDVTSFSIVLHVYSR 96
+ I N K F + R +G+ PDV + S+++H S+
Sbjct: 570 FIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSK 629
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K Q ++ + + +KG+ P V TYTS++ LC G ++ A EL +M + G++P+ T
Sbjct: 630 NGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVT 689
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + A +L+ + E L N TY+ +I + + ++++ +
Sbjct: 690 YNALINGLCKLGEIAKARELFDGIPEKGL-ARNSVTYSTIIAGYCKSANLTEAFQLFHGM 748
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K + D Y LI G C+ ++A F+ M+E+G + F L G + L
Sbjct: 749 KLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG-IASTPAFNALIDGFFKLGKL 807
Query: 277 RTWRRLKKKLDEESIT 292
+L + + + IT
Sbjct: 808 IEAYQLVEDMVDNHIT 823
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 145/340 (42%), Gaps = 59/340 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YT+LI +C++ +++ + L +M E+G PN+VTY+V++ G+CR +
Sbjct: 229 VPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALE 288
Query: 61 FEKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
++++ N + + DEM G++PD +++ +++ +
Sbjct: 289 LKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFV 348
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + M + I TY +++ LC G +E AE+L EM G+ P +
Sbjct: 349 KQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQ 408
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV---------------------------- 187
TYNC + Y ++ A +L ++K+++L
Sbjct: 409 TYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEM 468
Query: 188 ------PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
PNI Y ++ + R + +I +K L D+ Y +I G C+ K
Sbjct: 469 ISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKM 528
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 281
+E Y VEMI KGL P T+ G ++ ++ R
Sbjct: 529 EEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAER 568
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 149/323 (46%), Gaps = 31/323 (9%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV------------- 49
N Y +LI+G CKI ++ AE EM G++P++ TYN L+ G
Sbjct: 371 NTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELL 430
Query: 50 --CRRASLHPNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
++ +L N I N A ++F EM G++P++ ++ ++ +
Sbjct: 431 IEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKE 490
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ + ++ L MK++G+ P V Y +V+ C G++E+ + L EM+ G+ P+ TY
Sbjct: 491 GRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTY 550
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
F Y + A + + +M + + ++ +++ G N + +
Sbjct: 551 GAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLD 610
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
L D+ ++++LIHGL + K +EA F E+++KGL+P T+ +L L + L+
Sbjct: 611 QGVLP-DVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLK 669
Query: 278 TWRRL-----KKKLDEESITFGS 295
L KK ++ +T+ +
Sbjct: 670 AAFELHDDMCKKGINPNIVTYNA 692
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
N M +++ G C + A EMI G++PN+V Y ++ G+ + RF
Sbjct: 440 ANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEG------RF 493
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ I K+ M+ +G+ PDV ++ V+ + +A K + L M KG+ P V T
Sbjct: 494 EEAI----KILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYT 549
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y + + C G ++ AE EM+ +G++P+ Y + A +R M
Sbjct: 550 YGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCML 609
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + +P++ T+++LI ++ +++ + L D+ +YT LI LC++
Sbjct: 610 DQGV-LPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDL 668
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSE 296
K A + +M +KG+ P VT+ L GL + + R L +K L S+T+ +
Sbjct: 669 KAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTI 728
Query: 297 FQNY 300
Y
Sbjct: 729 IAGY 732
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 12/288 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT+LI G+ K + I A + EM R ++ N TY L++G+C+ L
Sbjct: 335 PDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDL------ 388
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE +F EM + GI+PD+ +++ ++ Y + + + + L +K++ +
Sbjct: 389 ----EKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYM 444
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++V LC CG + A EL EM+ G+ P+ Y K A+K+ MK
Sbjct: 445 CGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMK 504
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L P++ YN +I F +M+ + + L ++ +Y IHG C +
Sbjct: 505 DQGLS-PDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEM 563
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-SDMLRTWRRLKKKLDE 288
+ A + F+EM++ G+ P V L G + + + + + + LD+
Sbjct: 564 QAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQ 611
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 15/288 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YTSLI CK + A +M ++G+ PN+VTYN L+NG+C+
Sbjct: 649 VPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGE------ 702
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A ++FD + +G+ + ++S ++ Y ++ + + MK G+ P
Sbjct: 703 ----IAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSF 758
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C G E A L MV G++ S +N + A +L M
Sbjct: 759 VYCALIDGCCKAGNTEKALSLFLGMVEEGIA-STPAFNALIDGFFKLGKLIEAYQLVEDM 817
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + PN TY ILI + + +++ ++ + ++ +YT L+HG +
Sbjct: 818 VDNHI-TPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGR 876
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
E F EM+ +G+ P + + + ++ W + K +D+
Sbjct: 877 RSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEG---NWIKALKLVDD 921
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 131/269 (48%), Gaps = 12/269 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V+ ++ LI+G K ++ A E++++G+ P+V TY L++ +C+ L
Sbjct: 614 LPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDL----- 668
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++ D+M +GI P++ +++ +++ + + + + + + EKG+
Sbjct: 669 -----KAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSV 723
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY++++ C + +A +L M GV P + Y + A+ L+ M
Sbjct: 724 TYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGM 783
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E+ + + +N LI F L ++ ++ + + + + +YT+LI C
Sbjct: 784 VEEG--IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGN 841
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRG 269
KEA Q F+EM ++ ++P +T+ +L G
Sbjct: 842 IKEAEQLFMEMQKRNVMPNVLTYTSLLHG 870
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 141/287 (49%), Gaps = 15/287 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y +LI G CK+ I A + E+G+ N VTY+ ++ G C+ A+L E F
Sbjct: 685 PNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANL--TEAF 742
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +F M++ G+ PD + ++ +A + +L M E+GI T A
Sbjct: 743 Q--------LFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPA- 793
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ G++ +A +L+ +MV N ++P+ TY + + + A +L+ +M+
Sbjct: 794 FNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQ 853
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ +PN+ TY L+ + + R + +++ + + D ++++++ ++ W
Sbjct: 854 KRNV-MPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNW 912
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+A + +M+ +G+ K + L L + + L + K LDE
Sbjct: 913 IKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNL---SEVLKVLDE 956
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 117/291 (40%), Gaps = 45/291 (15%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75
K NR+++ + M+ + P+V TY L+N CR + + V +M
Sbjct: 210 KGNRVELFWKVYKGML-GAIVPDVYTYTNLINAYCRVGK----------VEEGKHVLFDM 258
Query: 76 RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135
+G P++ ++S+V+ RA +L+ M KG+ P Y +++ C R
Sbjct: 259 EEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRS 318
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM--------------- 180
+ + +L EM G+ P Y + + D GA ++ +M
Sbjct: 319 TEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYAL 378
Query: 181 -----------KEDDL--------CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221
K +DL P+I TYN LI + + M+ E+ +K L
Sbjct: 379 IHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENL 438
Query: 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ +++GLC A + F EMI GL P V + T+ +GL++
Sbjct: 439 TANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVK 489
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 2/223 (0%)
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
KV+ M + I PDV +++ +++ Y R K + L M+EKG P + TY+ V+ L
Sbjct: 219 KVYKGM-LGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGL 277
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C G +++A EL M G+ P Y + +K + + +M L P+
Sbjct: 278 CRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGL-KPD 336
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
Y LI F+ + + ++ + ++ L+ +Y LIHGLC+ ++A F
Sbjct: 337 HVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFS 396
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EM G+ P T+ L G + + L ++ +E++T
Sbjct: 397 EMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLT 439
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ + + +LI G+ K+ ++ A + + +M++ + PN VTY +L+ C +
Sbjct: 788 IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGN------ 841
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I+ AE++F EM+ R + P+V +++ +LH Y+R + + M +GI P
Sbjct: 842 ----IKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDL 897
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
++ +V G A +L+ +M+ GV+ Y
Sbjct: 898 AWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLY 934
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 15/269 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V++Y LI G C +I+ A RF EM+++G+E N+VTYN L++G+ L
Sbjct: 527 PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLS----- 581
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE + E+ +G++PDV +++ ++ Y A Q + MK GI PT+ T
Sbjct: 582 -----EAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ LC+ IE E L GEM + P YN Y D A L +QM
Sbjct: 637 YHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMI 692
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + + TYN LI + + ++ VR + + + E+ + D+Y +++ G CE + +
Sbjct: 693 EKSIGLDKT-TYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDY 751
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A ++ EM EKG L L GL
Sbjct: 752 MSAYVWYREMQEKGFLLDVCIGNELVSGL 780
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 11/292 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y +LI G+CK + + + M +EP+++T+N LL G+ +
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG------- 298
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ +AE V EM+ G PD +FSI+ YS K + +L + G+
Sbjct: 299 ---MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T + ++ LC G+IE AEE+LG + G+ P+ YN Y + D GA M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + P+ YN LI F L M+ + N +K + +++Y +LI G K +
Sbjct: 416 EKQGM-KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ + EM + G +P V++ TL L + L + +K+ +++ ++
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVS 526
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 144/307 (46%), Gaps = 16/307 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ ++ L G+ + + A ++ GV+ N T ++LLN +C+
Sbjct: 316 VPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK--------- 366
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I AE++ +G+ P+ ++ ++ Y R + K+ M+++G+ P
Sbjct: 367 -EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C G +E+AE+ + +M GVSPS ETYN Y + + + + ++M
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
ED+ +PN+ +Y LI +++ + + ++ + + Y MLI G C K K
Sbjct: 486 -EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
++A ++ EM++KG+ VT+ TL GL + L L +K L + T+ S
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604
Query: 296 EFQNYHF 302
Y F
Sbjct: 605 LISGYGF 611
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 26/282 (9%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN----ERFEKT- 64
L+ CK +I+ AE LG + +G+ PN V YN +++G CR+ L E EK
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 65 --------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL 104
+ NAEK ++M+++G+ P V +++I++ Y R ++
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 105 DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164
D L M++ G P V +Y +++ CLC ++ +A+ + +M GVSP YN
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD 224
+ A + ++M + + + N+ TYN LI ++ ++ + L D
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIEL-NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ +Y LI G + + EM G+ P T+ L
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLL 640
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 11/267 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ MY I K++ + M + P+V YNVL++G+C+
Sbjct: 177 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKG--------- 227
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + +AE++FDEM R + P + +++ ++ Y +A P+ S MK I P++ T
Sbjct: 228 -KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLIT 286
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++K L G +EDAE +L EM G P A T++ F Y + A A+ +Y +
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY-ETA 345
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D N +T +IL+ +++ EI L + Y +I G C K
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYR 268
A M ++G+ P + + L R
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIR 432
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 21/284 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V+ Y LI G+ + D L EM + G PNVV+Y L+N +C+ + L
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL------ 510
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE---KGICPT 118
A+ V +M RG+ P V +++++ K + D F KE KGI
Sbjct: 511 ----LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE---DAFRFSKEMLKKGIELN 563
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ TY +++ L G++ +AE+LL E+ R G+ P TYN Y + + LY
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYE 623
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+MK + P + TY++LI + +++ ++ + L DL Y ++H
Sbjct: 624 EMKRSGI-KPTLKTYHLLISLCTK-EGIELTERLFGEMS---LKPDLLVYNGVLHCYAVH 678
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
++A +MIEK + K T+ +L G ++ L R L
Sbjct: 679 GDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 112/281 (39%), Gaps = 79/281 (28%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLH----------------------------VY 94
K I A +F +R GI P S +++L +Y
Sbjct: 123 KMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY 182
Query: 95 SRAHKPQLSLDKL-------NFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147
+A + + L + N MK I P+V Y ++ LC R+ DAE+L EM+
Sbjct: 183 GKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA 242
Query: 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRM 206
+ PS TYN Y + + K+ +MK D + P++ T+N L+ G+F A
Sbjct: 243 RRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHI-EPSLITFNTLLKGLFKA---- 297
Query: 207 DMVREIWNHVK------------------------------------GSELGLDLDSYT- 229
MV + N +K + G+ +++YT
Sbjct: 298 GMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTC 357
Query: 230 -MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+L++ LC++ K ++A + + KGL+P +V + T+ G
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG 398
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 125/268 (46%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G+ K +D A +M E+G+ PNVVTY+ L+NG+C+
Sbjct: 151 PDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCK---------- 200
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + AE+V +M G+ P+ +++ ++H YS + + S+ M + P V
Sbjct: 201 TKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGN 260
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
S + LC GRI++A ++ MV G P +Y Y G L+ M
Sbjct: 261 CNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMV 320
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + VP+ H +N LI + L MD ++ + + D+ +++ +I C +
Sbjct: 321 CEGV-VPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRL 379
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
+A + F MI+ G+ P + L +G
Sbjct: 380 DDAMEKFNHMIDTGVPPDTAVYSCLIQG 407
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 144/358 (40%), Gaps = 65/358 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV Y+SLI G CK +D AER L +M+ GV PN +TYN L++G + R
Sbjct: 185 MPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVR 244
Query: 61 FEKT-------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLH--- 92
K I+ A +FD M ++G +PDV S+ +LH
Sbjct: 245 VFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYA 304
Query: 93 --------------------------------VYSRAHKPQLSLDKLNFMKEKGICPTVA 120
Y+R SL M ++G+ P +
Sbjct: 305 TAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDII 364
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+++V+ C GR++DA E M+ GV P Y+C + R+D A +L M
Sbjct: 365 TFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDM 424
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P I + +I R+ +++ + + + +L ++ L+ G C
Sbjct: 425 LSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGN 484
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRR-LKKKLDEESITF 293
KEA M G+ P T+ TL G + D L +R L K++ S+++
Sbjct: 485 MKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSY 542
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 136/286 (47%), Gaps = 19/286 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++++I +C++ R+D A MI+ GV P+ Y+ L+ G C R
Sbjct: 361 PDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR--------- 411
Query: 62 EKTIRNAEKVFDEMRVRGIEPD-VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A+++ +M +GI P + F+ +++ + + D ++ + G P +
Sbjct: 412 -RDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLI 470
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ S+V C G +++A LL M GV P TYN Y + A+ L+R M
Sbjct: 471 TFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 530
Query: 181 KEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ + ++ +YNI++ G+F A R + +E+++ + S + + + +Y ++ GLC
Sbjct: 531 LHKRVTLTSV-SYNIILHGLFQA-RRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNN 588
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK 285
EA M+ + L V F+ L ++ M + RR + K
Sbjct: 589 CTDEA-----NMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAK 629
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 148/354 (41%), Gaps = 62/354 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---- 56
+P+V S + CK RI A M+ +G +P+V++Y LL+G +
Sbjct: 255 VPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDN 314
Query: 57 -----------PNERFEKTIRNAEK----------VFDEMRVRGIEPDVTSFSIVLHVYS 95
P+ T+ NA +F++M +G+ PD+ +FS V+ +
Sbjct: 315 LFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFC 374
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATY--------------------------------- 122
R + +++K N M + G+ P A Y
Sbjct: 375 RLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCI 434
Query: 123 ---TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TS++ LC GR+ + ++++ ++ G P+ T+N Y + A+ L
Sbjct: 435 KFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDS 494
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ + P+I+TYN L+ + R+D ++ + + L SY +++HGL + +
Sbjct: 495 MESVGV-EPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQAR 553
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
+ A + F EMIE G+ T+ T+ GL +++ L +KL ++ F
Sbjct: 554 RTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKF 607
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 125/269 (46%), Gaps = 16/269 (5%)
Query: 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P + TYN+L+N C R + P+ VF + G+ PDV S++ ++ +S+
Sbjct: 116 PTIYTYNILIN--CYRRARRPDLGL--------PVFGRLLRTGLGPDVFSYNALIDGFSK 165
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D M+E+GI P V TY+S++ LC ++ AE +L +MV GV P+ T
Sbjct: 166 EGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMT 225
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YNC Y +++++++M L VP++ N + R+ R+I++ +
Sbjct: 226 YNCLIHGYSTSGMWKESVRVFKEMSS-SLLVPDVGNCNSFMTALCKHGRIKEARDIFDSM 284
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR-----GLI 271
D+ SY L+HG F M+ +G++P + F TL G++
Sbjct: 285 VLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMM 344
Query: 272 QSDMLRTWRRLKKKLDEESITFGSEFQNY 300
+L K+ ++ + ITF + +
Sbjct: 345 DKSLLMFEDMTKQGVNPDIITFSTVISAF 373
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 120/265 (45%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + SL+ G+C + + A L M GVEP++ TYN L++G C+
Sbjct: 467 PNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGR------- 519
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I +A +F +M + + S++I+LH +A + ++ + + M E G+ ++ T
Sbjct: 520 ---IDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHT 576
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V+ LC ++A LL ++ V T+N + A +L+ +
Sbjct: 577 YATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAIS 636
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L VP I TY ++I + + +++ ++ S D +I L K +
Sbjct: 637 TYGL-VPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEV 695
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+A Y ++ +KG+LP+ T L
Sbjct: 696 AKAGNYLSKIDKKGILPEATTTSLL 720
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 100/224 (44%), Gaps = 26/224 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPNER 60
P++ Y +L+ G+CK RID A +M+ + V V+YN++L+G+ + R ++ E
Sbjct: 502 PDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEM 561
Query: 61 FEKTI-------------------RN-----AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F + I RN A + +++ ++ D+ +F+IV+ +
Sbjct: 562 FHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFK 621
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ Q + + + G+ PT+ TY ++ L EDA+ L M ++ +P +
Sbjct: 622 VGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRI 681
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
N + + + A ++ + + +P T ++LI +F
Sbjct: 682 LNEIIRMLLNKGEVAKAGNYLSKIDKKGI-LPEATTTSLLIYLF 724
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 139/301 (46%), Gaps = 16/301 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT +I+G I A EM+++GV PNVVTYN +++ +C+
Sbjct: 270 PDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCK---------- 319
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + AE V +M I+PD +++ ++H YS + + + M +G+ P + T
Sbjct: 320 ARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVT 379
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++ LC R ++A E+ + G P +Y+ Y L+ M
Sbjct: 380 FNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMT 439
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ + V + H +NILI MD I+ ++G + ++ +Y +I LC +
Sbjct: 440 DNGI-VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRL 498
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL-IQSDMLRTWRRLKKKLDE----ESITFGSE 296
+A + +MI GL P V + +L +G D+++ + + +D+ +ITF S
Sbjct: 499 ADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSS 558
Query: 297 F 297
Sbjct: 559 I 559
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 149/332 (44%), Gaps = 50/332 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT++I+G+ + R A + EM G+ P++VT+N L++ +C+
Sbjct: 340 PDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCK---------- 389
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS-------------------------- 95
K + A ++F + +G +PD+ S+SI+LH Y+
Sbjct: 390 HKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHC 449
Query: 96 -----RAHKPQLSLDK----LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
AH + +D+ M+ +G+ P V TY +V+ LC GR+ DA E L +M+
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI 509
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G+ P+ Y+ + + D A +L +M + + PNI ++ +I R+
Sbjct: 510 SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRV 569
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
++++N V D+ ++ LI G C K +A M+ G P VT+ TL
Sbjct: 570 MNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTL 629
Query: 267 YRGLIQS----DMLRTWRR-LKKKLDEESITF 293
G +S D L +R L K++ ++T+
Sbjct: 630 INGYFKSGRIDDGLILFREMLCKRVKPTTVTY 661
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 16/269 (5%)
Query: 14 WCKINRIDMA-ERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
C R D A L M E G P+ +YN ++ +C E + +R +
Sbjct: 210 LCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLC--GGSRSQEALDMLLRMTKG-- 265
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
G PDV S+++V+H + + + N M +KG+ P V TY S+V LC
Sbjct: 266 -----DGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKA 320
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
++ AE +L +M N + P TY Y A K++++M + L +P+I T
Sbjct: 321 RAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGL-IPDIVT 379
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
+N L+ R EI++ + D+ SY++L+HG + ++ + F M
Sbjct: 380 FNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMT 439
Query: 253 EKGLLPQKVTFETLY-----RGLIQSDML 276
+ G++ F L RG++ +L
Sbjct: 440 DNGIVADSHCFNILINAHAKRGMMDEALL 468
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 120/271 (44%), Gaps = 11/271 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ ++S+I+ C R+ A+ +I G P++ T+N L++G C +
Sbjct: 551 PNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMD----- 605
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V D M G EPDV ++S +++ Y ++ + L M K + PT T
Sbjct: 606 -----KAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVT 660
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ V+ L GR A+++ EM+ +G + S TY + + A+ L+ ++
Sbjct: 661 YSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLG 720
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+L I N +I + R + +++ V S L + +Y ++I L ++
Sbjct: 721 AMNLKF-EIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSV 779
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+EA F M + G P + R L+Q
Sbjct: 780 EEADIMFSSMEKTGCAPSSRLLNDIIRMLLQ 810
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 23/246 (9%)
Query: 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH-------KPQLSLDKLNFM--KEKG 114
+ +A +FDE+ + + + L +RA P L++ N + +E G
Sbjct: 98 STEDAHHLFDELLRQDTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREEAG 157
Query: 115 --ICP-TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE--YRGRKD 169
+ P TV TY ++ C C R + ++R G+ N F K Y R D
Sbjct: 158 PRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTD 217
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR----MDMVREIWNHVKGSELGLDL 225
+M L+R + CVP+ +YN +I +R +DM+ + KG D+
Sbjct: 218 EALSMLLHRMSELG--CVPDAFSYNTVIKSLCGGSRSQEALDMLLRM---TKGDGCSPDV 272
Query: 226 DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK 285
SYTM+IHGL + + +AC F EM++KG++P VT+ ++ L ++ + + ++
Sbjct: 273 VSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQ 332
Query: 286 LDEESI 291
+ + SI
Sbjct: 333 MFDNSI 338
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 18/291 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y LI G+CK ++ A +M G+ PN T N LL G+C +
Sbjct: 30 PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQM------ 83
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+F EM+ P S +I+L + A + + +L L M++ T
Sbjct: 84 ----SSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGT 139
Query: 122 YTSVVKCLC----SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
Y V+K LC S R+E A E EM +GV P E+Y+ A L+
Sbjct: 140 YNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALF 199
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
M C P+I TYN+L+ + + + + + + + ++ +Y+++I+ C+
Sbjct: 200 SAMT----CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCK 255
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
K +EA + F++MIE +P VTF TL G ++ ML +L ++++
Sbjct: 256 LDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEK 306
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 137/282 (48%), Gaps = 13/282 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y L+ G+CKI + A+ + E+++ G EPNV TY++++N C+
Sbjct: 206 PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKL--------- 256
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +VF +M P+ +F+ ++ + +A + ++ M++ G T+ T
Sbjct: 257 -DKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVT 315
Query: 122 YTSVVKCLCSC-GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ LC G + A +L ++ G++P+ TYN + + + + AM+ + +M
Sbjct: 316 YNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM 375
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C PN+ TY+ILI + RM + +K + +Y LI+G C+ +
Sbjct: 376 EGK--CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGE 433
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
K A +F +M G P V F TL GL +++ RL
Sbjct: 434 LKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRL 475
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 16/278 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+++ Y L+ R+ A M P+++TYNVL++G C+ + +
Sbjct: 174 PDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSL 230
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K I A G EP+V ++SI+++ Y + K + + + M E P T
Sbjct: 231 MKEILKA----------GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVT 280
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQM 180
+ +++ C G +EDA +L EM + G + TYN + R A+ L+ ++
Sbjct: 281 FNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKL 340
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L P I TYN LI F R+ + ++ ++G + ++ +Y++LI GLC+ ++
Sbjct: 341 EGAGL-TPTIVTYNSLIQGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRR 398
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
KEA + +M G P VT+ L G + L++
Sbjct: 399 MKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKS 436
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 126/270 (46%), Gaps = 31/270 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR-------- 52
+PN + +LI G+CK ++ A + EM + G + +VTYN L++ +C++
Sbjct: 275 VPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAV 334
Query: 53 --------ASLHPN--------ERF--EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
A L P + F + + A + FDEM + P+V ++SI++
Sbjct: 335 DLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGL 393
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ + + + L MK G PTV TY ++ C CG ++ A +M G +P+
Sbjct: 394 CKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNT 453
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
+N + AN ++L M + C P++ TYN LI + NR++ + +++
Sbjct: 454 VIFNTLIDGLCKAERANDGLRLLCHMHAEG-CKPDVITYNCLISGLCSANRVEDAQRLFD 512
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
G ++ ++ LI GLC ++K +EA
Sbjct: 513 ---GMACAPNVTTFNFLIRGLCAQKKVEEA 539
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 148/357 (41%), Gaps = 81/357 (22%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGV-----CRRASL 55
+PN +L+ G C+I ++ A + EM P ++N+LL G R A
Sbjct: 64 LPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALA 123
Query: 56 HPNE------------------------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
H + + + A + F EM+ G+EPD+ S+ I+L
Sbjct: 124 HLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILL 183
Query: 92 HVYS------RAH--------KPQL---------------SLDKLNFMKE---KGICPTV 119
S AH P + + + + MKE G P V
Sbjct: 184 SALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNV 243
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY+ ++ C C ++E+A E+ +M+ + P+A T+N + A+KL+ +
Sbjct: 244 FTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAE 303
Query: 180 MKEDDLCVPNIHTYNILI--------GMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
M E C I TYN LI G++ A+ +++N ++G+ L + +Y L
Sbjct: 304 M-EKIGCKATIVTYNTLIDSLCKKRGGVYTAV-------DLFNKLEGAGLTPTIVTYNSL 355
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
I G C+ ++ EA QYF EM E P +T+ L GL + +R + K L++
Sbjct: 356 IQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCK---VRRMKEAAKTLED 408
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y SLI G+C R+ A ++ EM E PNV+TY++L++G+C+
Sbjct: 347 PTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKV--------- 396
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ ++ A K ++M+ G P V ++ +++ + + + + +L MK G P
Sbjct: 397 -RRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVI 455
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ LC R D LL M G P TYNC A +L+ M
Sbjct: 456 FNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA 515
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
C PN+ T+N LI A +++ R I +
Sbjct: 516 ----CAPNVTTFNFLIRGLCAQKKVEEARNILD 544
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 13/282 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+ +I +CK+++++ A +MIE PN VT+N L+ G C+ L
Sbjct: 241 PNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLE----- 295
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP-QLSLDKLNFMKEKGICPTVA 120
+A K+F EM G + + +++ ++ + ++D N ++ G+ PT+
Sbjct: 296 -----DAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIV 350
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S+++ C R+ +A + EM +P+ TY+ + A K M
Sbjct: 351 TYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDM 409
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K P + TY LI F + + +K + + + LI GLC+ ++
Sbjct: 410 KAHGY-TPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAER 468
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ + M +G P +T+ L GL ++ + +RL
Sbjct: 469 ANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 510
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A++L++++ L PN HTYN+LI F +M +++ +K S L + + L+
Sbjct: 16 ALRLFKEVLAG-LFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLL 74
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
GLCE + A + F EM LP + L RG + +R
Sbjct: 75 LGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N L+ ++ + D ++ V + +Y +LI G C+ + +A F +M
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 254 KGLLPQKVTFETLYRGLIQ----SDMLRTWRRLK 283
GLLP T TL GL + S L+ +R ++
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQ 94
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 148/325 (45%), Gaps = 33/325 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-HPNER 60
PNV +T I + +ID A M + G P++VTY VL++ +C L + E
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKEL 319
Query: 61 FEKTIRNAEK------------------------VFDEMRVRGIEPDVTSFSIVLHVYSR 96
F K N K + +M G PDV +F+I++ V +
Sbjct: 320 FVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + + M+++GI P + TY +++ L GRIEDA +LLG M GV P+A T
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYT 439
Query: 157 YNCFFKEYRGRKDANG-AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
YN F +Y G+ G A++ + +MK + VPNI N + + R+ + ++N
Sbjct: 440 YNIFI-DYFGKSGETGKAVETFEKMKAKGI-VPNIVACNASLYSLAEMGRLREAKTMFNG 497
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT----FETLYRGLI 271
++ + L D +Y M++ + + EA EMI G P + ++LY+
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557
Query: 272 QSDMLRTWRRLKK-KLDEESITFGS 295
+ + + R+K KL +T+ +
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNT 582
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 137/286 (47%), Gaps = 11/286 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V +T L+ CK D A M ++G+ PN+ TYN L+ G+ R
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR------ 417
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I +A K+ M G++P +++I + + ++ + +++ MK KGI P +
Sbjct: 418 ----IEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIV 473
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ + L GR+ +A+ + + NG++P + TYN K Y + A+ L +M
Sbjct: 474 ACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEM 533
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P++ N LI R+D ++++ +K +L + +Y L+ GL ++ +
Sbjct: 534 IRNG-CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGR 592
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
++A + F MIEK P ++F TL ++D + ++ K+
Sbjct: 593 VQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM 638
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 140/298 (46%), Gaps = 19/298 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y +LI G + RI+ A + LG M GV+P TYN+ + +
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFI------------DY 446
Query: 61 FEKTIRNAEKV--FDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
F K+ + V F++M+ +GI P++ + + L+ + + + + N ++E G+ P
Sbjct: 447 FGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPD 506
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
TY ++KC G++++A LL EM+RNG P N + A +++
Sbjct: 507 SVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+MK+ L P + TYN L+ R+ E++ + + + S+ L+ C+
Sbjct: 567 RMKDMKLS-PTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKN 625
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT----WRRLKKKLDEESIT 292
+ + A + F +M P +T+ T+ GLI+ + + + +LKK + + +T
Sbjct: 626 DEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVT 683
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 132/285 (46%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + Y LI +++ + A +M G P+ T+N+LL S E F
Sbjct: 786 PTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL--AVHGKSGKITELF 843
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E ++ EM R +PD +++IV+ ++++ +LD + PT T
Sbjct: 844 E--------LYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRT 895
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ L GR+E+A L EM G P+ +N Y D A +L+++M
Sbjct: 896 YGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMV 955
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P++ +Y IL+ R+D +N +K + L D +Y +I+GL + Q+
Sbjct: 956 NEGI-RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+EA + EM +G++P T+ +L L + M+ +R+ ++L
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEEL 1059
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 120/265 (45%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +I K N +D A F +++ P TY L++G+ + R
Sbjct: 856 PDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVG------RL 909
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ +R +F+EM G +P+ F+I+++ Y + + + M +GI P + +
Sbjct: 910 EEAMR----LFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKS 965
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +V CLC GR+++A E+ G+ P YN + A+ LY +M+
Sbjct: 966 YTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMR 1025
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ VP+++TYN L+ ++ + ++ ++ + L D+ +Y LI G +
Sbjct: 1026 NRGI-VPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENP 1084
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+ A + M+ G P T+ L
Sbjct: 1085 EHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 113/237 (47%), Gaps = 17/237 (7%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKV---FDEMRVRGIEPDVTS 86
M+ G++P++ TY+ L+ + ++ R++E V EM G+ P+V +
Sbjct: 218 MVSEGLKPSLKTYSALMVALGKK-------------RDSEMVMVLLKEMEDLGLRPNVYT 264
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F+I + V RA K + + M ++G P + TYT ++ LC+ G++E+A+EL +M
Sbjct: 265 FTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMK 324
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
NG P Y ++ D + + + QM+ D +P++ T+ IL+ +
Sbjct: 325 ANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY-MPDVVTFTILVDVLCKARDF 383
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
D ++ ++ + +L +Y LI GL + ++A + M G+ P T+
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTY 440
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 1/207 (0%)
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
R + + VF+ M+ + I D+ ++ + S + LN M++ G
Sbjct: 133 RVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNA 192
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+Y ++ L G +A E+ MV G+ PS +TY+ ++D+ M L ++
Sbjct: 193 YSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKE 252
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M ED PN++T+ I I + ++D EI+ + G DL +YT+LI LC
Sbjct: 253 M-EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAG 311
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + A + FV+M G P +V + TL
Sbjct: 312 QLENAKELFVKMKANGHKPDQVIYITL 338
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 135/330 (40%), Gaps = 53/330 (16%)
Query: 16 KINRIDMAERFLGEMIERGVEPNVV-TYNVLLNGVCRRAS-LHPNERF---EKTIRNAEK 70
++NR + G ++E ++ ++ ++LNG+CR S L P R K A +
Sbjct: 714 RVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQ 773
Query: 71 VFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+FD+ + GI P + S++ ++ H + + D MK G P T+ ++
Sbjct: 774 IFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVH 833
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNC----------------FF-----KEYRGRK 168
G+I + EL EM+ P A TYN FF ++R
Sbjct: 834 GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893
Query: 169 DANG--------------AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
G AM+L+ +M D C PN +NILI + + + +++
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEM-SDYGCKPNCAIFNILINGYGKIGDTETACQLFK 952
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ + DL SYT+L+ LC + EA YF E+ GL P + + + GL +S
Sbjct: 953 RMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQ 1012
Query: 275 MLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
+ EE++ +E +N P
Sbjct: 1013 RM-----------EEALALYNEMRNRGIVP 1031
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y SL+ ++ A+R E+ G+EP+V TYN L+ G SL N
Sbjct: 1030 VPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGY----SLSENP- 1084
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
+A V+ M V G P++ +++
Sbjct: 1085 -----EHAYTVYKNMMVDGCNPNIGTYA 1107
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 133/313 (42%), Gaps = 26/313 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + ++ +CK ++D A + +M E G P+ VTYN L+NG C+ ++ R
Sbjct: 381 PNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRT 440
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
EK + A K+ R RG D S+ ++ Y +
Sbjct: 441 MDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFK 500
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L + MKEK I P+ TY ++ LC CG+ E A L E++ +G+ P T
Sbjct: 501 DGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETT 560
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN Y D A + + +M E+ P++ T NIL+ ++ +++N
Sbjct: 561 YNTILHGYCREGDVEKAFQFHNKMVENSF-KPDVFTCNILLRGLCMEGMLEKALKLFNTW 619
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+D +Y LI LC++ + +A EM EK L P T+ + L S +
Sbjct: 620 VSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRI 679
Query: 277 RTWRRLKKKLDEE 289
R K+ E+
Sbjct: 680 REAEEFMSKMLEK 692
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 134/304 (44%), Gaps = 46/304 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y L+YG+CK+ + A + M + + P+V TYN+L+NG+C
Sbjct: 275 LPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN--------- 325
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I A K+ DEM + PDV S++ +++ K + L M EKG+ P
Sbjct: 326 -EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAV 384
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY---------------R 165
T+ +VK C G+++DA + +M +G SP TYN Y
Sbjct: 385 THNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEM 444
Query: 166 GRKDAN--------------------GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
GRK+ A KL ++ + + +++G F N
Sbjct: 445 GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN- 503
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+D ++W+ +K E+ +Y +I GLC+ K ++A E++E GLLP + T+ T
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563
Query: 266 LYRG 269
+ G
Sbjct: 564 ILHG 567
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 132/282 (46%), Gaps = 11/282 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV + +IYG+C N+ A FL M + P+ VTYN +L+ +C++ L
Sbjct: 205 VPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLG---- 260
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A + +M+ RG+ P+ +++I+++ Y + + + + + M + + P V
Sbjct: 261 ------DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVW 314
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC+ GRIE+A +L EM + P +YN + A KL +M
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + PN T+NI++ + +MD ++ S D +Y LI+G C+
Sbjct: 375 SEKGV-KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
EA + EM K + VT T+ R L + L +L
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKL 475
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 146/303 (48%), Gaps = 19/303 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + + I + + + A + +M + PN++T N LLN + R S H
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSH----- 187
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + + F++ GI P+V +F+IV++ Y +K + +++ LN M + P T
Sbjct: 188 --SVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVT 245
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GR+ DA +LL +M G+ P+ TYN Y A + M
Sbjct: 246 YNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT 305
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+++L +P++ TYN+LI R++ ++ + ++ +L D+ SY LI+G E K
Sbjct: 306 QNNL-LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKI 364
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
EA + EM EKG+ P VT + + W + K+D+ S T ++ +
Sbjct: 365 SEAFKLLEEMSEKGVKPNAVTHNIMVK----------WYCKEGKMDDASNTI-TKMEESG 413
Query: 302 FKP 304
F P
Sbjct: 414 FSP 416
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 128/289 (44%), Gaps = 34/289 (11%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G+ K +D A + EM E+ + P+ VTYN ++ G+C+ + E+ I
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCG------KTEQAIS 544
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+E+ G+ PD T+++ +LH Y R + + N M E P V T ++
Sbjct: 545 K----LNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ LC G +E A +L V G + TYN + A L +M+E +L
Sbjct: 601 RGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHV--KG----SELGLDLD-------------- 226
P+ +TYN +I R+ E + + KG L LD +
Sbjct: 661 -PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDS 719
Query: 227 ---SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+Y+ I LC + K+K+A + F E +KG+ K T+ L GLI+
Sbjct: 720 SSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 140/325 (43%), Gaps = 44/325 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +LI G + ++I A + L EM E+GV+PN VT+N+++ C+
Sbjct: 345 LPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCK--------- 395
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + +A +M G PD +++ +++ Y +A + ++ M K +
Sbjct: 396 -EGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSV 454
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T ++++ LC ++E+A +LL + G +Y Y + + A+KL+ +M
Sbjct: 455 TLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514
Query: 181 KEDD--------------LC--------------------VPNIHTYNILIGMFMALNRM 206
KE + LC +P+ TYN ++ + +
Sbjct: 515 KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDV 574
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + N + + D+ + +L+ GLC + ++A + F + KG VT+ TL
Sbjct: 575 EKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTL 634
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESI 291
L + L L +++E+ +
Sbjct: 635 ITSLCKEGRLDDAFNLLSEMEEKEL 659
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 79/152 (51%), Gaps = 10/152 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++++G+C+ ++ A +F +M+E +P+V T N+LL G+C
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC---------- 604
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A K+F+ +G D +++ ++ + + + + L+ M+EK + P
Sbjct: 605 MEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHY 664
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
TY +++ L GRI +AEE + +M+ G P
Sbjct: 665 TYNAIITALTDSGRIREAEEFMSKMLEKGXLP 696
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 142/287 (49%), Gaps = 14/287 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+++I G+ K +D EM+++ + PNVVTYN ++ +C+
Sbjct: 86 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCK---------- 135
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+T+ A +V M G+ PD +++ ++H + + +P+ ++ L M+ G+ P V T
Sbjct: 136 AQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVT 195
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR +A ++ M + G+ P TY + Y + L M
Sbjct: 196 YNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 255
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN + ++IL+ + +++ +++ ++ L + +Y +I LC+ +
Sbjct: 256 RNGIH-PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 314
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
++A YF +MI++GL P + + +L GL + W R ++ + E
Sbjct: 315 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN---KWERAEELILE 358
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 147/342 (42%), Gaps = 79/342 (23%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y S+++G+C + A FL +M GVEP+VVTYN L++ +C+ N R
Sbjct: 155 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK------NGR 208
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTS---------------------------------- 86
+ A K+FD M RG++P++T+
Sbjct: 209 CTE----ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 264
Query: 87 -FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
FSI++ Y++ K + ++ + M+++G+ P TY +V+ LC GR+EDA +M
Sbjct: 265 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 324
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV------------------ 187
+ G+SP YN A +L +M + +C+
Sbjct: 325 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 384
Query: 188 ----------------PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
P+I TY+ LI + +MD ++ + + D +Y+ L
Sbjct: 385 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTL 444
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
I+G C+ + K+A F EM G+ P +T+ + +GL Q+
Sbjct: 445 INGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQT 486
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 140/299 (46%), Gaps = 11/299 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +Y SLI+G C N+ + AE + EM++RG+ N + +N +++ C+
Sbjct: 331 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK---------- 380
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +EK+FD M G++PD+ ++S ++ Y A K + L M G+ P T
Sbjct: 381 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 440
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ C R++DA L EM +GVSP TYN + + A +LY +
Sbjct: 441 YSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 500
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + TYNI++ D ++ ++ +L L+ ++ ++I L + +
Sbjct: 501 KSGRQL-ELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 559
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
EA FV GL+P T+ + +I +L +L +++ T S N+
Sbjct: 560 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 618
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 19/280 (6%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE- 81
A E++ RG+ P+V +YN+LLNG+C E + A ++ M G +
Sbjct: 36 ARHVFDELLRRGI-PDVFSYNILLNGLCD----------ENRSQEALELLHIMADDGGDC 84
Query: 82 -PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
PDV S+S V++ + + + N M ++ I P V TY S++ LC ++ A E
Sbjct: 85 PPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAME 144
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
+L MV++GV P TYN + A+ ++M+ D + P++ TYN L+
Sbjct: 145 VLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGV-EPDVVTYNSLMDYL 203
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
R R+I++ + L ++ +Y L+ G K E M+ G+ P
Sbjct: 204 CKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 263
Query: 261 VTFETLYRGL-----IQSDMLRTWRRLKKKLDEESITFGS 295
F L ++ ML + ++ L+ ++T+G+
Sbjct: 264 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGA 303
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 2/157 (1%)
Query: 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL-CVPNIHTYN 194
EDA + E++R G+ P +YN + A++L M +D C P++ +Y+
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 195 ILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
+I F +D +N + + ++ +Y +I LC+ Q +A + M++
Sbjct: 93 TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152
Query: 255 GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
G++P +T+ ++ G S + KK+ + +
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGV 189
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 25/197 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPNER 60
P+ Y++LI G+CKI+R+ A EM GV P+++TYN++L G+ + R + E
Sbjct: 436 PDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 495
Query: 61 F------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ K +A ++F + + ++ + +F+I++ +
Sbjct: 496 YVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLK 555
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D G+ P TY + + + G +E+ ++L M NG + +
Sbjct: 556 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGM 615
Query: 157 YNCFFKEYRGRKDANGA 173
N +E R + A
Sbjct: 616 LNFIVRELLQRGEITRA 632
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 151/301 (50%), Gaps = 19/301 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+LI G CK I A L EM+ RG +PNV T+ L++G+C++
Sbjct: 292 PNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT------ 345
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK R K+ +R G +P+V +++ +++ Y + K + L+ M+E+G+ P T
Sbjct: 346 EKAFRLFLKL---VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT 402
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G A EL+ M + G SP+ TYN + + A +L ++
Sbjct: 403 YTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVS 462
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQ 239
L + TY IL M + + D R + K ++G D+ SYT LI C ++
Sbjct: 463 VHGLQADGV-TYTIL--MSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQK 519
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK-LDEESITFG 294
+ KE+ + F E + GL+P K T+ ++ G + S ++ ++R+ +SIT+G
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYG 579
Query: 295 S 295
+
Sbjct: 580 A 580
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 46/266 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YT+LI G CK+ A + M + G PN+ TYN +++G+C++ SL
Sbjct: 397 VPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLD---- 452
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++ +++ V G++ D +++I++ V+ R SL N M + G P +
Sbjct: 453 ------EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIH 506
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+YT+++ C +++++E L E V G+ P+ +TY Y + + A+KL+++M
Sbjct: 507 SYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRM 566
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C P+ TY LI GLC++ K
Sbjct: 567 SNHG-CAPDSITYGALIS-----------------------------------GLCKESK 590
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
+A + M++KGL P +VT TL
Sbjct: 591 LDDARNLYDAMMDKGLSPCEVTRLTL 616
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 121/268 (45%), Gaps = 10/268 (3%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+++AE EM +RGV P+ V++ +++ C + AE+ + M RG
Sbjct: 205 VEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR----------VLEAERWLNAMVERG 254
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
D + ++++ + + + M E G+ P V +T+++ LC G I+ A
Sbjct: 255 FIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAF 314
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
ELL EMVR G P+ T+ + A +L+ ++ D PN+HTY +I
Sbjct: 315 ELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMING 374
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ ++++ + + ++ L + ++YT LI G C+ + A + M ++G P
Sbjct: 375 YCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPN 434
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKLD 287
T+ + GL + L RL K+
Sbjct: 435 IYTYNAIIDGLCKKGSLDEAYRLLNKVS 462
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 29/233 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y ++I G CK +D A R L ++ G++ + VTY +L++ CR+A + + F
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+K ++ +E++F+E G+ P +++ ++ Y R
Sbjct: 493 FNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCR 552
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
L++ M G P TY +++ LC +++DA L M+ G+SP T
Sbjct: 553 YGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVT 612
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
EY + D++ A+ + ++++ I T N L+ + ++DM
Sbjct: 613 RLTLAYEYCKKDDSSTAINVLDRLEKRQW----IRTVNTLVRKLCSEGKLDMA 661
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G++++A ++ EM G+ PS +T NC G A ++ +M + + P+ +
Sbjct: 168 GKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVS-PDCVS 226
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
+ +++ + R+ N + +D + T++I C+K YF +M+
Sbjct: 227 FKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLR 277
E GL P + F L GL + ++
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIK 311
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 151/301 (50%), Gaps = 19/301 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+LI G CK I A L EM+ RG +PNV T+ L++G+C++
Sbjct: 292 PNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT------ 345
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK R K+ +R G +P+V +++ +++ Y + K + L+ M+E+G+ P T
Sbjct: 346 EKAFRLFLKL---VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT 402
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G A EL+ M + G SP+ TYN + + A +L ++
Sbjct: 403 YTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVS 462
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQ 239
L + TY IL M + + D R + K ++G D+ SYT LI C ++
Sbjct: 463 VHGLQADGV-TYTIL--MSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQK 519
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK-LDEESITFG 294
+ KE+ + F E + GL+P K T+ ++ G + S ++ ++R+ +SIT+G
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYG 579
Query: 295 S 295
+
Sbjct: 580 A 580
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 46/266 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YT+LI G CK+ A + M + G PN+ TYN +++G+C++ SL
Sbjct: 397 VPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLD---- 452
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++ +++ V G++ D +++I++ V+ R SL N M + G P +
Sbjct: 453 ------EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIH 506
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+YT+++ C +++++E L E V G+ P+ +TY Y + + A+KL+++M
Sbjct: 507 SYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRM 566
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C P+ TY LI GLC++ K
Sbjct: 567 SNHG-CAPDSITYGALIS-----------------------------------GLCKESK 590
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
+A + M++KGL P +VT TL
Sbjct: 591 LDDARNLYDAMMDKGLSPCEVTRLTL 616
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 121/268 (45%), Gaps = 10/268 (3%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+++AE EM +RGV P+ V++ +++ C + AEK + M RG
Sbjct: 205 VEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR----------VLEAEKWLNAMVERG 254
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
D + ++++ + + + M E G+ P V +T+++ LC G I+ A
Sbjct: 255 FIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAF 314
Query: 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199
ELL EMVR G P+ T+ + A +L+ ++ D PN+HTY +I
Sbjct: 315 ELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMING 374
Query: 200 FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
+ ++++ + + ++ L + ++YT LI G C+ + A + M ++G P
Sbjct: 375 YCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPN 434
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKLD 287
T+ + GL + L RL K+
Sbjct: 435 IYTYNAIIDGLCKKGSLDEAYRLLNKVS 462
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 29/233 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y ++I G CK +D A R L ++ G++ + VTY +L++ CR+A + + F
Sbjct: 433 PNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF 492
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+K ++ +E++F+E G+ P +++ ++ Y R
Sbjct: 493 FNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCR 552
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
L++ M G P TY +++ LC +++DA L M+ G+SP T
Sbjct: 553 YGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVT 612
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
EY + D++ A+ + ++++ I T N L+ + ++DM
Sbjct: 613 RLTLAYEYCKKDDSSTAINVLDRLEKRQW----IRTVNTLVRKLCSEGKLDMA 661
>gi|115448805|ref|NP_001048182.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|46805701|dbj|BAD17102.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497356|dbj|BAD19395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537713|dbj|BAF10096.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|125583759|gb|EAZ24690.1| hypothetical protein OsJ_08460 [Oryza sativa Japonica Group]
gi|215704115|dbj|BAG92955.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766866|dbj|BAG99094.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 555
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 14/257 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + Y+ L +GWC+ A + L EMI+ P TYN ++ C
Sbjct: 254 NAETYSILFFGWCRARDPKRAMKVLEEMIQMKHTPENFTYNAAIDSFCSAG--------- 304
Query: 63 KTIRNAEKVFDEMRVRGI---EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ A +F+ MR G P ++SI++ ++A + + + ++ M++ G P V
Sbjct: 305 -LVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAKAGQMEECFELISEMRKCGCMPDV 363
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+TY +++ + +++ A +L EM + G P TYNCF K G + A+ A++L +
Sbjct: 364 STYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTYNCFLKVLCGLQKADDALELCER 423
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E C P++HTYN+L+ MF + D IW + +D+Y +I GL +
Sbjct: 424 MIEAH-CEPSVHTYNMLMVMFFEMREPDRAINIWIEMDKRGCHRAVDTYETMIDGLFDSG 482
Query: 240 KWKEACQYFVEMIEKGL 256
+ ++A E+I +G+
Sbjct: 483 RTEDATALLDEVINRGM 499
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V Y LI G ++++D A L EM + G P++VTYN L +C L +
Sbjct: 360 MPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTYNCFLKVLC---GLQKAD- 415
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A ++ + M EP V ++++++ ++ +P +++ M ++G V
Sbjct: 416 ------DALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMDKRGCHRAVD 469
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ L GR EDA LL E++ G+ S + ++ + +L M
Sbjct: 470 TYETMIDGLFDSGRTEDATALLDEVINRGMKLSYKKFDAIMLRLSAVGNLGAIHRLSEHM 529
Query: 181 K 181
+
Sbjct: 530 R 530
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P ++ C CG + +AE + + R + +AETY+ F + +D AMK+
Sbjct: 219 PETDALNVLLDAFCKCGMVREAEVVFSRVKRKLLG-NAETYSILFFGWCRARDPKRAMKV 277
Query: 177 YR---QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK--GSELGL-DLDSYTM 230
QMK P TYN I F + + R+++ ++ GS + +Y++
Sbjct: 278 LEEMIQMKH----TPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSI 333
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+I L + + +E + EM + G +P T++ L G++ D L
Sbjct: 334 MIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKL 379
>gi|125541207|gb|EAY87602.1| hypothetical protein OsI_09013 [Oryza sativa Indica Group]
Length = 555
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 14/257 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + Y+ L +GWC+ A + L EMI+ P TYN ++ C
Sbjct: 254 NAETYSILFFGWCRARDPKRAMKVLEEMIQMKHTPENFTYNAAIDSFCSAG--------- 304
Query: 63 KTIRNAEKVFDEMRVRGI---EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ A +F+ MR G P ++SI++ ++A + + + ++ M++ G P V
Sbjct: 305 -LVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAKAGQMEECFELISEMRKCGCMPDV 363
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+TY +++ + +++ A +L EM + G P TYNCF K G + A+ A++L +
Sbjct: 364 STYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTYNCFLKVLCGLQKADDALELCER 423
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M E C P++HTYN+L+ MF + D IW + +D+Y +I GL +
Sbjct: 424 MIEAH-CEPSVHTYNMLMVMFFEMREPDRAINIWIEMDKRGCHRAVDTYETMIDGLFDSG 482
Query: 240 KWKEACQYFVEMIEKGL 256
+ ++A E+I +G+
Sbjct: 483 RTEDATTLLDEVINRGM 499
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V Y LI G ++++D A L EM + G P++VTYN L +C L +
Sbjct: 360 MPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTYNCFLKVLC---GLQKAD- 415
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A ++ + M EP V ++++++ ++ +P +++ M ++G V
Sbjct: 416 ------DALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMDKRGCHRAVD 469
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ L GR EDA LL E++ G+ S + ++ + +L M
Sbjct: 470 TYETMIDGLFDSGRTEDATTLLDEVINRGMKLSYKKFDAIMLRLSAVGNLGAIHRLSEHM 529
Query: 181 K 181
+
Sbjct: 530 R 530
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P ++ C G + +AE + + R + +AETY+ F + +D AMK+
Sbjct: 219 PETDALNVLLDAFCKSGMVREAEAVFSRVKRKLLG-NAETYSILFFGWCRARDPKRAMKV 277
Query: 177 YR---QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK--GSELGL-DLDSYTM 230
QMK P TYN I F + + R+++ ++ GS + +Y++
Sbjct: 278 LEEMIQMKH----TPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSI 333
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+I L + + +E + EM + G +P T++ L G++ D L
Sbjct: 334 MIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKL 379
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 142/325 (43%), Gaps = 60/325 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PN+ +TSLI G CK I A L EM+ G +PNV T+ L++G+C+R
Sbjct: 886 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 945
Query: 54 --------SLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ PN E + AE +F M+ +G+ P+V +++ +++ +
Sbjct: 946 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 1005
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A + + +N M ++G P + TY + + LC R +A ELL + G+
Sbjct: 1006 KAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGV 1065
Query: 156 TYNCFFKEYRGRKDANGAMKLY-------------------------RQMKEDDL----- 185
TY +E + D N A+ + ++MKE +
Sbjct: 1066 TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLV 1125
Query: 186 ----CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+P TY +I + +D+ + ++++K D +Y LI GLC+K
Sbjct: 1126 VSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 1185
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
EAC+ + MI++GL P +VT TL
Sbjct: 1186 DEACKLYEAMIDRGLSPPEVTRVTL 1210
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
++ + +I R++ A + +M +G+ P+ +T N +L I AE
Sbjct: 754 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELG----------LIEYAE 803
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT-------- 121
VFDEM VRG+ PD +S+ +++ R K Q + L M ++G P AT
Sbjct: 804 NVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTAL 863
Query: 122 ---------------------------YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+TS++ LC G I+ A E+L EMVRNG P+
Sbjct: 864 CENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV 923
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
T+ R A +L+ ++ D PN+HTY +IG + ++++ +++
Sbjct: 924 YTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFS 983
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+K L ++++YT LI+G C+ + A + M ++G +P T+ L
Sbjct: 984 RMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSL 1039
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 12/257 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ T ++ C+ ++ A + +MI+ G +PN++ + L++G+C++ S
Sbjct: 850 IPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS------ 903
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDV-TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
I+ A ++ +EM G +P+V T +++ + R + L ++ P V
Sbjct: 904 ----IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNV 959
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYTS++ C ++ AE L M G+ P+ TY + A +L
Sbjct: 960 HTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNL 1019
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M ++ +PNI+TYN I +R E+ N L D +YT+LI C++
Sbjct: 1020 MGDEGF-MPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQN 1078
Query: 240 KWKEACQYFVEMIEKGL 256
+A +F M + G
Sbjct: 1079 DINQALAFFCRMNKTGF 1095
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 120/307 (39%), Gaps = 47/307 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP--- 57
PNV YT+LI G CK A + M + G PN+ TYN ++ +C+++
Sbjct: 991 FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYE 1050
Query: 58 --NERF--------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
N+ F + I A F M G E D+ +I++ +
Sbjct: 1051 LLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFC 1110
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
R K + S + G+ PT TYTS++ C C G I+ A + M R+G P +
Sbjct: 1111 RQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSF 1170
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI------HTY---NILIGMFMALNRM 206
TY + + A KLY M + L P + + Y N + L +
Sbjct: 1171 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL 1230
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D +++W + + L+ LC ++K A +F +++EK +VT
Sbjct: 1231 D--KKLW-----------IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAF 1277
Query: 267 YRGLIQS 273
+S
Sbjct: 1278 TTACSES 1284
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 17/185 (9%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY-----NCFFKEY 164
M+ +G+ P+ T V++ G IE AE + EM GV P + +Y CF
Sbjct: 774 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCF---- 829
Query: 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV-REIWNHVKGSELGL 223
R K L ++ +P+ T +++ AL +V R IW K +LG
Sbjct: 830 RDGKIQEADRWLTGMIQRG--FIPDNATCTLIL---TALCENGLVNRAIWYFRKMIDLGF 884
Query: 224 --DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 281
+L ++T LI GLC+K K+A + EM+ G P T L GL + R
Sbjct: 885 KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 944
Query: 282 LKKKL 286
L KL
Sbjct: 945 LFLKL 949
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 125 VVKCL----CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
V++C+ GR+ +A ++ +M G++PS+ T NC + A ++ +M
Sbjct: 750 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 809
Query: 181 KEDDLCVPNIHTYNIL-IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ VP+ +Y ++ IG F + R + ++ + D + T+++ LCE
Sbjct: 810 SVRGV-VPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIP-DNATCTLILTALCENG 867
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
A YF +MI+ G P + F +L GL + ++
Sbjct: 868 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIK 905
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 125/268 (46%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G+ K +D A +M E+G+ PNVVTY+ L+NG+C+
Sbjct: 222 PDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCK---------- 271
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + AE+V +M G+ P+ +++ ++H YS + + S+ M + P V
Sbjct: 272 TKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGN 331
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
S + LC GRI++A ++ MV G P +Y Y G L+ M
Sbjct: 332 CNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMV 391
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + VP+ H +N LI + L MD ++ + + D+ +++ +I C +
Sbjct: 392 CEGV-VPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRL 450
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
+A + F MI+ G+ P + L +G
Sbjct: 451 DDAMEKFNHMIDTGVPPDTAVYSCLIQG 478
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 144/358 (40%), Gaps = 65/358 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV Y+SLI G CK +D AER L +M+ GV PN +TYN L++G + R
Sbjct: 256 MPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVR 315
Query: 61 FEKT-------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLH--- 92
K I+ A +FD M ++G +PDV S+ +LH
Sbjct: 316 VFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYA 375
Query: 93 --------------------------------VYSRAHKPQLSLDKLNFMKEKGICPTVA 120
Y+R SL M ++G+ P +
Sbjct: 376 TAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDII 435
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+++V+ C GR++DA E M+ GV P Y+C + R+D A +L M
Sbjct: 436 TFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDM 495
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ P I + +I R+ +++ + + + +L ++ L+ G C
Sbjct: 496 LSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGN 555
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRR-LKKKLDEESITF 293
KEA M G+ P T+ TL G + D L +R L K++ S+++
Sbjct: 556 MKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSY 613
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 136/286 (47%), Gaps = 19/286 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++++I +C++ R+D A MI+ GV P+ Y+ L+ G C R
Sbjct: 432 PDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR--------- 482
Query: 62 EKTIRNAEKVFDEMRVRGIEPD-VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A+++ +M +GI P + F+ +++ + + D ++ + G P +
Sbjct: 483 -RDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLI 541
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ S+V C G +++A LL M GV P TYN Y + A+ L+R M
Sbjct: 542 TFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 601
Query: 181 KEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+ + ++ +YNI++ G+F A R + +E+++ + S + + + +Y ++ GLC
Sbjct: 602 LHKRVTLTSV-SYNIILHGLFQA-RRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNN 659
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK 285
EA M+ + L V F+ L ++ M + RR + K
Sbjct: 660 CTDEA-----NMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAK 700
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 148/354 (41%), Gaps = 62/354 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---- 56
+P+V S + CK RI A M+ +G +P+V++Y LL+G +
Sbjct: 326 VPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDN 385
Query: 57 -----------PNERFEKTIRNAEK----------VFDEMRVRGIEPDVTSFSIVLHVYS 95
P+ T+ NA +F++M +G+ PD+ +FS V+ +
Sbjct: 386 LFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFC 445
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATY--------------------------------- 122
R + +++K N M + G+ P A Y
Sbjct: 446 RLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCI 505
Query: 123 ---TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TS++ LC GR+ + ++++ ++ G P+ T+N Y + A+ L
Sbjct: 506 KFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDS 565
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ + P+I+TYN L+ + R+D ++ + + L SY +++HGL + +
Sbjct: 566 MESVGV-EPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQAR 624
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
+ A + F EMIE G+ T+ T+ GL +++ L +KL ++ F
Sbjct: 625 RTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKF 678
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 125/269 (46%), Gaps = 16/269 (5%)
Query: 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P + TYN+L+N C R + P+ VF + G+ PDV S++ ++ +S+
Sbjct: 187 PTIYTYNILIN--CYRRARRPDLGL--------PVFGRLLRTGLGPDVFSYNALIDGFSK 236
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + D M+E+GI P V TY+S++ LC ++ AE +L +MV GV P+ T
Sbjct: 237 EGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMT 296
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YNC Y +++++++M L VP++ N + R+ R+I++ +
Sbjct: 297 YNCLIHGYSTSGMWKESVRVFKEMSS-SLLVPDVGNCNSFMTALCKHGRIKEARDIFDSM 355
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR-----GLI 271
D+ SY L+HG F M+ +G++P + F TL G++
Sbjct: 356 VLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMM 415
Query: 272 QSDMLRTWRRLKKKLDEESITFGSEFQNY 300
+L K+ ++ + ITF + +
Sbjct: 416 DKSLLMFEDMTKQGVNPDIITFSTVISAF 444
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 120/265 (45%), Gaps = 11/265 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ + SL+ G+C + + A L M GVEP++ TYN L++G C+
Sbjct: 538 PNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGR------- 590
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I +A +F +M + + S++I+LH +A + ++ + + M E G+ ++ T
Sbjct: 591 ---IDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHT 647
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V+ LC ++A LL ++ V T+N + A +L+ +
Sbjct: 648 YATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAIS 707
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L VP I TY ++I + + +++ ++ S D +I L K +
Sbjct: 708 TYGL-VPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEV 766
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
+A Y ++ +KG+LP+ T L
Sbjct: 767 AKAGNYLSKIDKKGILPEATTTSLL 791
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 100/224 (44%), Gaps = 26/224 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPNER 60
P++ Y +L+ G+CK RID A +M+ + V V+YN++L+G+ + R ++ E
Sbjct: 573 PDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEM 632
Query: 61 FEKTI-------------------RN-----AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F + I RN A + +++ ++ D+ +F+IV+ +
Sbjct: 633 FHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFK 692
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ Q + + + G+ PT+ TY ++ L EDA+ L M ++ +P +
Sbjct: 693 VGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRI 752
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
N + + + A ++ + + +P T ++LI +F
Sbjct: 753 LNEIIRMLLNKGEVAKAGNYLSKIDKKGI-LPEATTTSLLIYLF 795
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 131/277 (47%), Gaps = 11/277 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +LI+ C+ +++ A M + GV+P++ TYN LL G C++ +
Sbjct: 398 LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMD---- 453
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K++ EM + G +P+V ++ ++ Y + L+ MK+ G+
Sbjct: 454 ------EAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDY 507
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ +C R+ + + +L + G P+ TYN + A +Y+QM
Sbjct: 508 TYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQM 567
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+E L PNI TY I + DM ++ N V+ L D+ +Y LI+G C++
Sbjct: 568 REKGL-PPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGN 626
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
A Q V +++ GL P V + +L G +M++
Sbjct: 627 MSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMK 663
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +L+ G+ D A L EM + GV N TYNVL+NG+C
Sbjct: 469 PNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGIC----------M 518
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + + G P + +++ +++ + +A + M+EKG+ P + T
Sbjct: 519 VDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIIT 578
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS + C G + A ++L ++ R G+ P YN + + + A++L +
Sbjct: 579 YTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILL 638
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+D L PN YN LI + LN M V + + + + D +YT LI G +
Sbjct: 639 KDGL-APNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNV 697
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A + + EM+ KG +P TF L GL +S + ++L +++
Sbjct: 698 AFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEM 742
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 143/293 (48%), Gaps = 29/293 (9%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNG------------VC 50
+V + T+L+ G+C + A E ++ G+ P V Y VL+ G +C
Sbjct: 296 DVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELC 355
Query: 51 RRAS---LHPNERFEKTI-----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R+ + L P+ FE ++ ++A +F+EM G+ PDV +++ ++H + +
Sbjct: 356 RQMTGQGLLPST-FELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQ 413
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
AHK + +L+ + MK+ G+ P++ TY S++ C G +++A +L EM G P+ T
Sbjct: 414 AHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVT 473
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + Y +KD + A L +MK++ + N +TYN+LI ++R+ V +
Sbjct: 474 YITLMRGYIAKKDFDNAYALLDEMKQNGVSC-NDYTYNVLINGICMVDRVCEVDGMLKSF 532
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ +Y +I+G + A + +M EKGL P +T+ + G
Sbjct: 533 MSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDG 585
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------- 54
PN+ YTS I G+C+ DMA + L ++ RG++P++V YN L+NG C+ +
Sbjct: 574 PNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQL 633
Query: 55 --------LHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
L PN ++ + K ++ M GI D ++++ ++ +S+
Sbjct: 634 LVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSK 693
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L+ + M KG P T+T++ LC G I+ A++LL EM R V P+
Sbjct: 694 DGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFI 753
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197
YN Y A +L+ +M + P+ TY+IL+
Sbjct: 754 YNMLINGYLRDCKLQEAFRLHDEMLNMGI-QPDDTTYDILV 793
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 122/270 (45%), Gaps = 12/270 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ ++Y I CK+ A R L EM E G + TY +++ + + R
Sbjct: 225 PDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTG------RM 278
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ +R V DEMR G + DV + ++ Y + +L+ + GI PT
Sbjct: 279 EEALR----VNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVM 334
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ G + A EL +M G+ PS + K + A+ L+ +M
Sbjct: 335 YGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMA 394
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L P++ TYN LI +++ +++ +K + + +++Y L+ G C+K
Sbjct: 395 DSGL--PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCM 452
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
EA + + EM +G P VT+ TL RG I
Sbjct: 453 DEAVKLYSEMPMEGFKPNVVTYITLMRGYI 482
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 129/305 (42%), Gaps = 17/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++K T L+ + + A EM RG + ++ L++ C + +H
Sbjct: 154 VPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSA-CLKEGMH---- 208
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A ++FDEM I+PD +++ + + +L L MKE G
Sbjct: 209 -----EDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDF 263
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V L GR+E+A + EM G + Y R++ A+ L+++
Sbjct: 264 TYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKET 323
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+D + VP Y +LI + E+ + G L ++++ GL ++
Sbjct: 324 LKDGI-VPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRR 382
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR----TWRRLKKKLDEESI-TFGS 295
WK+A F EM + G LP T+ L Q+ LR + R+KK + SI T+ S
Sbjct: 383 WKDAVCLFEEMADSG-LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNS 441
Query: 296 EFQNY 300
Y
Sbjct: 442 LLMGY 446
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 5/226 (2%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A + M RG+ PD+ S + +L +R + +L M+ +G + +++
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED--DL 185
G EDA L EM + P Y D A+++ R+MKE D
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
C TY ++ + + RM+ + + ++ + +D+ T L+ G C +Q+ A
Sbjct: 261 C---DFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNAL 317
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
F E ++ G++P KV + L RG Q M + L +++ + +
Sbjct: 318 NLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGL 363
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +T+L +G C+ ID A++ L EM V PNV YN+L+NG R L
Sbjct: 713 IPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKL----- 767
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
+ A ++ DEM GI+PD T++ I++
Sbjct: 768 -----QEAFRLHDEMLNMGIQPDDTTYDILV 793
>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12300, mitochondrial-like [Glycine max]
Length = 450
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 141/298 (47%), Gaps = 28/298 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----RASLH- 56
P+ +T+LI G C +++ A F +++ +G++ + V+Y L+NGVC+ R ++
Sbjct: 138 PHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKL 197
Query: 57 ----------PNERFEKTIRNA----------EKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN TI +A +F EM +GI +V S++I++ + +
Sbjct: 198 VRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCK 257
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +L+ M +K + PT+ TY S++ LC GRI EL+ EM G+ T
Sbjct: 258 SKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVIT 317
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + A+ L+ +MK+ + T+ IL+ R+ +E++ +
Sbjct: 318 YNSLIDGLCKNGHLDRAIALFNKMKDXRF---DRLTFTILLDGLCKGGRLKDAQEVFQDL 374
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
E LD+ Y ++I+G C++ +EA +M + G +P VTFE + L + D
Sbjct: 375 LTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKD 432
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 17/260 (6%)
Query: 17 INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR 76
I +D A M+ P V+ +N +L+ K A + +
Sbjct: 48 IQNVDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXM----------KHYSTAVSLSHRLE 97
Query: 77 VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
++GI+PD + +I+++ + + L + ++G P T+T+++K LC G++
Sbjct: 98 LKGIQPDFFTLNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVN 157
Query: 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
A +++ G+ +Y D GA+KL R++ + L PN+ YN +
Sbjct: 158 KALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKI-DGRLTKPNVEMYNTI 216
Query: 197 IGMFMALNRMDMVRE---IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
I AL + +V E +++ + + ++ SY ++I G C+ + EA F EM +
Sbjct: 217 ID---ALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQ 273
Query: 254 KGLLPQKVTFETLYRGLIQS 273
K ++P VT+ +L GL +S
Sbjct: 274 KNMVPTIVTYGSLMDGLCKS 293
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 86/173 (49%), Gaps = 23/173 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH---- 56
+P + Y SL+ G CK RI + EM +RG+ +V+TYN L++G+C+ L
Sbjct: 277 VPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIA 336
Query: 57 -----PNERFEKT--------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
+ RF++ +++A++VF ++ + + DV ++++++ Y +
Sbjct: 337 LFNKMKDXRFDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQ 396
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+ +L + M++ G P+ T+ ++ L + AE+LL EM+ G+
Sbjct: 397 GLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEMIARGL 449
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V + SLI G C N +A EM +G P+ TYN+L++ +C R L
Sbjct: 418 LPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLE---- 473
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + EM G +V +++ ++ + + + + + + + M+ +GI V
Sbjct: 474 ------EALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVV 527
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ LC R+E+A +L+ +M+ G+ P TYN + D A + + M
Sbjct: 528 TYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTM 587
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P+ TY LI R+++ + V+ + L +Y +I L +++
Sbjct: 588 TSNG-CEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKR 646
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA + F EM+EKG P VT++ ++RGL
Sbjct: 647 TSEAVRLFREMMEKGDPPDAVTYKVVFRGL 676
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 135/291 (46%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K +T+L+ G+ + ++ A R +M+ G + VT NVL++G C+
Sbjct: 244 PDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCK---------- 293
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I DEM G PD +F+ +++ R + +L+ L+ M ++G P + T
Sbjct: 294 EGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFT 353
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC G +E+A E+L +M+ SP+ TYN A +L R +
Sbjct: 354 YNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLT 413
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +P++ T+N LI N + E++ +K D +Y MLI LC + +
Sbjct: 414 SKGI-LPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRL 472
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+EA EM G VT+ TL G ++ + + +++ + I+
Sbjct: 473 EEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGIS 523
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 129/285 (45%), Gaps = 47/285 (16%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV Y +LI G+CK RI+ AE EM +G+ NVVTYN L++G+C+ N R E
Sbjct: 490 NVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCK------NRRVE 543
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A ++ D+M + G++PD +++ +L + RA + + D + M G P TY
Sbjct: 544 E----AAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTY 599
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ L GR+E A LL + G+ + +TYN K K + A++L+R+M E
Sbjct: 600 GTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMME 659
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ-KW 241
KG D +Y ++ GLC
Sbjct: 660 ----------------------------------KGDPP--DAVTYKVVFRGLCSGGGPI 683
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EA + VEM +KG LP +F L GL M T +L ++
Sbjct: 684 GEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRV 728
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 121/270 (44%), Gaps = 10/270 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +Y ++ K R L EM G E T+ +L+ + E
Sbjct: 102 VPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKF------EL 155
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F++ + + + +E G++ D +++ +L+V +K +L + M +GI P V
Sbjct: 156 FDEAVAVVDIMEEEF---GLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVT 212
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++K LC +I A ++ EM G+SP +T+ + + + NGA+++ QM
Sbjct: 213 TFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQM 272
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
N+ T N+L+ + R++ V + + D ++ L++GLC
Sbjct: 273 VAAGCPSSNV-TVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGH 331
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
K A + M+++G P T+ +L GL
Sbjct: 332 VKHALEILDVMLQEGFDPDIFTYNSLIFGL 361
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 94/228 (41%), Gaps = 25/228 (10%)
Query: 104 LDKLNFM-KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
LD L++ K+ P+ Y V++ L G +L EM G T+ +
Sbjct: 89 LDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIE 148
Query: 163 EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222
Y + + A+ + M+E+ + TYN L+ + + N++ +V + + + +
Sbjct: 149 SYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIK 208
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
D+ ++ +LI LC + + A EM GL P + TF TL +G I+ + R+
Sbjct: 209 PDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRI 268
Query: 283 KKKL------------------------DEESITFGSEFQNYHFKPYR 306
++++ EE ++F E N F+P R
Sbjct: 269 REQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDR 316
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 133/306 (43%), Gaps = 26/306 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+ +Y I C + + A+ FL EM G+EP+ TYN ++ CR
Sbjct: 570 PDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKL 629
Query: 52 -----RASLHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R S+ PN T ++ A+ + +EM G P + VL S
Sbjct: 630 LKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSG 689
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +P + L+ M G+ + Y ++V LC G +A +L EM+ G++P T
Sbjct: 690 SRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTIT 749
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N + + A +Y QM L PNI T+N L+G + R+ + + +
Sbjct: 750 FNALILGHCKSSHLDNAFAIYAQMLHQGLS-PNIATFNTLLGGLESAGRIGEADTVLSDM 808
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K L + +Y +L+ G +K EA + + EM+ KG +P+ T+ +L ++ M+
Sbjct: 809 KKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMM 868
Query: 277 RTWRRL 282
+ L
Sbjct: 869 NQAKEL 874
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 26/310 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RR------- 52
PN+ YT+L+ G + + A+ L EM G P +T+ +L RR
Sbjct: 640 PNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEI 699
Query: 53 ------ASLHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
A LH + T+ RNA V DEM RGI PD +F+ ++ + +
Sbjct: 700 HELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCK 759
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + M +G+ P +AT+ +++ L S GRI +A+ +L +M + G+ P+ T
Sbjct: 760 SSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLT 819
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y+ Y + + A++LY +M +P TYN L+ F M+ +E+++ +
Sbjct: 820 YDILVTGYAKKSNKVEALRLYCEMVSKGF-IPKASTYNSLMSDFAKAGMMNQAKELFSEM 878
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K + +Y +L++G + + E +M E G P K T ++ R + M
Sbjct: 879 KRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMT 938
Query: 277 RTWRRLKKKL 286
RRL K L
Sbjct: 939 GEARRLLKTL 948
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 140/290 (48%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+LI +CK +D A M+ GV P+VVT + L++G+CR
Sbjct: 255 PNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCR---------- 304
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +F EM G+ P+ ++ ++ ++A + SL L M +G+ +
Sbjct: 305 DGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVM 364
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ L G+IE+A+++L + ++P+ TY + + +GA ++ QM+
Sbjct: 365 YTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQME 424
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + +PN+ T++ +I + + + +K S + ++ +Y LI G + Q
Sbjct: 425 EKSV-IPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQ 483
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ A + +M+ +G+ ++L GL ++ + L K +DE +
Sbjct: 484 EAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGL 533
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 136/336 (40%), Gaps = 61/336 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------- 51
+PNV ++S+I G K + A ++ +M + G+ PNVVTY L++G +
Sbjct: 429 IPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALD 488
Query: 52 --RASLHPNE--------------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
R LH R I AE +F +M RG+ D +++ ++
Sbjct: 489 VYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLF 548
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + EK + P Y + CLC+ G+ +A+ L EM G+ P
Sbjct: 549 KTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQA 608
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL-IGMFMA---------LNR 205
TYN + A+KL ++MK + + PN+ TY L +G+ A LN
Sbjct: 609 TYNTMIAARCREGKTSKALKLLKEMKRNSI-KPNLITYTTLVVGLLEAGVVKKAKFLLNE 667
Query: 206 M-------------------------DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
M D++ EI + G+ L D+ Y L+H LC
Sbjct: 668 MASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGM 727
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ A EM+ +G+ P +TF L G +S L
Sbjct: 728 ARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHL 763
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 19/268 (7%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT+L+ G K + A + E++E+ + P+ V YNV +N +C + F K
Sbjct: 540 YTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLK--- 596
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
EMR G+EPD +++ ++ R K +L L MK I P + TYT++V
Sbjct: 597 -------EMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLV 649
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
L G ++ A+ LL EM G +P++ T+ + G + + ++++ M L
Sbjct: 650 VGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLH 709
Query: 187 VPNIHTYNILIGMF----MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+I YN L+ + MA N ++ E+ + D ++ LI G C+
Sbjct: 710 A-DITVYNTLVHVLCCHGMARNATVVLDEMLTR----GIAPDTITFNALILGHCKSSHLD 764
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGL 270
A + +M+ +GL P TF TL GL
Sbjct: 765 NAFAIYAQMLHQGLSPNIATFNTLLGGL 792
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 136/303 (44%), Gaps = 16/303 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V + +LI G+CK+ + A + M +GV +VV YN L+ G H +
Sbjct: 186 DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGF-----FHSGDA-- 238
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A +V + M+ G+EP+V +++ ++ Y + + M G+ P V T
Sbjct: 239 ---DAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTL 295
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++V LC G+ +A L EM + GV+P+ TY + + ++ L +M
Sbjct: 296 SALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVS 355
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ V ++ Y L+ +++ +++ H + + + +YT+L+ C
Sbjct: 356 RGV-VMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNID 414
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI-----TFGSEF 297
A Q ++M EK ++P VTF ++ GL++ L +K+ + I T+G+
Sbjct: 415 GAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLI 474
Query: 298 QNY 300
+
Sbjct: 475 DGF 477
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 138/294 (46%), Gaps = 15/294 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V ++L+ G C+ + A EM + GV PN VTY L++ SL R
Sbjct: 289 LPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLID------SLAKARR 342
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+++ + EM RG+ D+ ++ ++ + K + + D L + I P
Sbjct: 343 GSESL----GLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFV 398
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT +V C G I+ AE++L +M V P+ T++ R A R+M
Sbjct: 399 TYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKM 458
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM--LIHGLCEK 238
K+ + PN+ TY LI F + +++ + G++ +++ + L++GL +
Sbjct: 459 KDSGIA-PNVVTYGTLIDGFFKFQGQEAALDVYRDMLHE--GVEANNFVVDSLVNGLRKN 515
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+ A F +M E+GLL V + TL GL ++ + ++ ++L E++++
Sbjct: 516 GNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLS 569
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 138/326 (42%), Gaps = 48/326 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +LI K R + LGEM+ RGV ++V Y L++ + +
Sbjct: 325 PNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGK---------- 374
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A+ V + I P+ ++++++ + RA + L M+EK + P V T
Sbjct: 375 EGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVT 434
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC----FFKEYRG----------- 166
++S++ L G + A + + +M +G++P+ TY FFK ++G
Sbjct: 435 FSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFK-FQGQEAALDVYRDM 493
Query: 167 -------------------RKDAN--GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
RK+ N GA L++ M E L + +++ ++ G+F N
Sbjct: 494 LHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGN- 552
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
M ++ + L D Y + I+ LC K+ EA + EM GL P + T+ T
Sbjct: 553 MPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNT 612
Query: 266 LYRGLIQSDMLRTWRRLKKKLDEESI 291
+ + +L K++ SI
Sbjct: 613 MIAARCREGKTSKALKLLKEMKRNSI 638
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 109/278 (39%), Gaps = 44/278 (15%)
Query: 33 RGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
R V + +T N ++ C SL P ++ + + D S++I L
Sbjct: 70 RPVPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQ------VAADTVSYNIFLA 123
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN---- 148
S +L+ L+ M ++G+ T ++ + LC G + +A L +VR
Sbjct: 124 ALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGID 183
Query: 149 ---------------------------------GVSPSAETYNCFFKEYRGRKDANGAMK 175
GV+ YN + DA+ A++
Sbjct: 184 GLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALE 243
Query: 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
+ +MK D + PN+ TY LIG + MD ++ + S + D+ + + L+ GL
Sbjct: 244 VVERMKADGV-EPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGL 302
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
C ++ EA F EM + G+ P VT+ TL L ++
Sbjct: 303 CRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKA 340
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 134/278 (48%), Gaps = 14/278 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G CK+ A L + + V+PNVV Y+ +++G+C+ +K +
Sbjct: 195 YGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCK----------DKHVN 244
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A ++ EM +GI P+V ++S ++ + K + ++D N M + I P V T+ +V
Sbjct: 245 DAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILV 304
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G+I A +L+ EM G P+ TY+ + A+ L ++K+ +
Sbjct: 305 DVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGI- 363
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+HTY ILI +++ R I+ + + + +Y ++ +G C+K + EA
Sbjct: 364 RPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASA 423
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLI---QSDMLRTWRR 281
+M E G +P T+E + L ++DM R
Sbjct: 424 LLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHR 461
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 135/288 (46%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +T+LI G C +I A F +++ G + N ++Y L++G+C+
Sbjct: 155 PNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGE------- 207
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
R A + + + ++P+V +S ++ + + D + M KGI P V T
Sbjct: 208 ---TRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 264
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ + G+++DA +L +M+ + P T+N + + A+KL +M
Sbjct: 265 YSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEM- 323
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D PNI TY+ ++ +R+D + +K + ++ +YT+LI GLC K
Sbjct: 324 HDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKL 383
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++A F +++ KG VT+ ++ G + + L K++E
Sbjct: 384 EDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEEN 431
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 134/285 (47%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ LI +C++ I A ++++ G PN +T+ L+ G+C + +H F
Sbjct: 120 PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNF 179
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
D++ G + + S+ ++ + + + +LD L + K + P V
Sbjct: 180 H----------DKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVM 229
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++ +C + DA +L EMV G+SP+ TY+ + A+ L+ +M
Sbjct: 230 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMI 289
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+++ P+++T+NIL+ +F ++ ++ + + ++ +Y+ ++ LC+ +
Sbjct: 290 SENI-KPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRV 348
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+A ++ ++G+ P T+ L GL S L R + + L
Sbjct: 349 DKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDL 393
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-ER 60
PNV MY+++I G CK ++ A EM+ +G+ PNVVTY+ L++G L +
Sbjct: 225 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDL 284
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F K I A K+ DEM RG P++ ++S +L +
Sbjct: 285 FNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 344
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
H+ ++ L +K++GI P + TYT ++ LC+ G++EDA + +++ G + T
Sbjct: 345 THRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVT 404
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
Y F + + + A L +M+E+ C+P+ TY ++
Sbjct: 405 YIVMFYGFCKKGLFDEASALLSKMEENG-CIPDAKTYELI 443
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 137/290 (47%), Gaps = 11/290 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P Y LI G+C+ I LGEM +G+ P VVTY +++ + R+ L
Sbjct: 113 VPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDL----- 167
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + EMR RG+ P+V ++ V++ + + D LN M + P V
Sbjct: 168 -----TKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVV 222
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ +++ C G + +A +LL E +R G+ P+ +Y + R +A A L +M
Sbjct: 223 TFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEM 282
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
P++ T LI + +++ + + ++ D + Y +LI GLC+K+
Sbjct: 283 MGRGH-TPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRM 341
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
A EM+E+ + P K + TL G ++SD L R++ + ++E++
Sbjct: 342 LSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKA 391
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 17/272 (6%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82
A GEM+ R + + V++ G+C E + + + G P
Sbjct: 65 ARGLYGEMLVREGGADDYSTCVMVRGLC----------LEGRVEEGRGLIEARWGEGCVP 114
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
+++++ Y R L L M+ KGI PTV TY +++ L G + E LL
Sbjct: 115 GAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLL 174
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
GEM G+SP+ + YN + A+ A + QM + P++ T+N +I F
Sbjct: 175 GEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRF-NPDVVTFNTMIAGFC- 232
Query: 203 LNRMDMVREIWNHVKGS-ELGLDLD--SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ 259
R VRE ++ + GL+ + SYT LIHG C + + A VEM+ +G P
Sbjct: 233 --REGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPD 290
Query: 260 KVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+T L GL+ S + +++K+ E +
Sbjct: 291 MITLGALIHGLVVSGQVNDALIVREKMAERQV 322
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 134/330 (40%), Gaps = 62/330 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ +Y LI G CK + A+ L EM+E+ V+P+ Y L++G R L
Sbjct: 323 MPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLS---- 378
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A K+F+ M + PD+ ++++++ Y + + ++ ++ M++ G P
Sbjct: 379 ------DARKIFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEF 431
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT++V G I + LL +M++ P+ TY Y D A L+ +M
Sbjct: 432 TYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKM 491
Query: 181 KEDDLCVPNIHTYNILIGMF---------------MALN-------------------RM 206
+ + L PN+ Y +LIG M LN R
Sbjct: 492 QSEGL-FPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRH 550
Query: 207 DMVREIWN-----HVKGSEL---------GLD--LDSYTMLIHGLCEKQKWKEACQYFVE 250
MV + H K + L GLD + +Y +I LC +A +
Sbjct: 551 GMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDK 610
Query: 251 MIEKGLLPQKVTFETLYRGLIQSDMLRTWR 280
M KG LP +TF +L G + WR
Sbjct: 611 MSNKGCLPDPITFLSLLYGFSSAGESGKWR 640
>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 595
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 137/291 (47%), Gaps = 15/291 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y LI+G C +R A L M+ +G+ P+V T+NV+ RF
Sbjct: 251 PDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVI------------GGRF 298
Query: 62 EKT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
KT I A+ +F M GIE DV ++S ++ V+ ++ + +++ + M KG P +
Sbjct: 299 LKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNI 358
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYTS++ C + A LGEMV NG+ P+ T+N + A +L+
Sbjct: 359 VTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFV 418
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + +P++ T I++ + ++ ++ LD+ Y+++++G+C
Sbjct: 419 MHKHGQ-LPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSG 477
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
K +A + F + KG+ VT+ + GL + +L L K++E
Sbjct: 478 KLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENG 528
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + +I C++N LG M + GVEP++VT+ ++NG+C
Sbjct: 111 PNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLC----------V 160
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A + D ++ G E D + +++ + +L L M+E+ V
Sbjct: 161 EGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTA 220
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +VV LC G + +A +L +M G+ P TYNC A L M
Sbjct: 221 YNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMM 280
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +P++ T+N++ G F+ + + I++ + + D+ +Y+ +I C +
Sbjct: 281 RKGI-MPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQM 339
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
K+A + F MI KG LP VT+ +L G
Sbjct: 340 KDAMEVFDLMIRKGCLPNIVTYTSLIHG 367
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 26/227 (11%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------ 54
+PN+ YTSLI+GWC+I ++ A FLGEM+ G++PN+VT+N L+ G C+
Sbjct: 355 LPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKE 414
Query: 55 ----LH-----PNERFEKTIRN----------AEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+H P+ + I + A +F E+ + D+ +SI+L+
Sbjct: 415 LFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMC 474
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ K +L+ +++ KG+ V TY ++ LC G ++DAE+LL +M NG P
Sbjct: 475 SSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDEC 534
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
TYN F + R + + + K MK N T +LI F A
Sbjct: 535 TYNVFVQGLLRRYEISKSTKYLMFMKGKGF-RANATTTKLLINYFSA 580
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 17/269 (6%)
Query: 17 INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR 76
+ +D+A F +M+ P V +N+L V + K A + M
Sbjct: 56 VKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKM----------KHYTTAISLIKHMS 105
Query: 77 VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
G++P+V + +IV++ R + L M + G+ P++ T+T++V LC G +
Sbjct: 106 YIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVA 165
Query: 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
A + + G T ++ A+ ++M+E + C ++ YN +
Sbjct: 166 QAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQN-CNLDVTAYNAV 224
Query: 197 IGMFMALNRMDMVREIWN---HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
+ L + MV E W+ + G + DL +Y LIHGLC +WKEA M+
Sbjct: 225 VD---GLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMR 281
Query: 254 KGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
KG++P TF + +++ M+ + +
Sbjct: 282 KGIMPDVQTFNVIGGRFLKTGMISRAKSI 310
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 133/274 (48%), Gaps = 15/274 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+V+ + + + K I A+ M G+E +VVTY+ ++ C
Sbjct: 285 MPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCML-------- 336
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+++A +VFD M +G P++ +++ ++H + ++ L M G+ P +
Sbjct: 337 --NQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIV 394
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ +++ C G+ A+EL M ++G P +T + AM L+R++
Sbjct: 395 TWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFREL 454
Query: 181 KE--DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
++ DL +I Y+I++ + +++ E+++++ + +D+ +Y ++I+GLC++
Sbjct: 455 EKMNSDL---DIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKE 511
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+A ++M E G P + T+ +GL++
Sbjct: 512 GLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLR 545
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 83/213 (38%), Gaps = 46/213 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPN----------------------- 38
PN+ + +LI G+CK + A+ M + G P+
Sbjct: 391 PNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSL 450
Query: 39 ------------VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTS 86
++ Y+++LNG+C L+ +A ++F + +G++ DV +
Sbjct: 451 FRELEKMNSDLDIIIYSIILNGMCSSGKLN----------DALELFSYLSSKGVKIDVVT 500
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
++I+++ + + D L M+E G P TY V+ L I + + L M
Sbjct: 501 YNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMK 560
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
G +A T + K+ N A +++ Q
Sbjct: 561 GKGFRANATTTKLLINYFSANKE-NRAFQVFLQ 592
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 140/306 (45%), Gaps = 26/306 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PNV ++ L++G+CKI + A E+ RG+ P+VV++N L++G CR
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVL 283
Query: 54 -SLHPNERF----------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
S+ +ER E + A +FDEM G+ P+ +F+ ++ +
Sbjct: 284 KSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCK 343
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K L+L MK++GI P + TY +++ LC G +++A +LL EM+ NG P T
Sbjct: 344 HGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKIT 403
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+ D + A+++ +M E+ + + ++ + LI R+ + +
Sbjct: 404 FTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDV-AFTALISGLCRDGRVRDAERMLKDM 462
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ D +YTM+I C+K K + EM G +P VT+ L G + +
Sbjct: 463 LSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQM 522
Query: 277 RTWRRL 282
+ + L
Sbjct: 523 KNAKML 528
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 132/266 (49%), Gaps = 14/266 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +T+LI G CK +ID+A R M +RG+ P+++TYN L+NG+CR L
Sbjct: 328 VPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDL----- 382
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K+ +EM G +PD +F+ ++ + +L+ + M E+GI
Sbjct: 383 -----KEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDV 437
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+T+++ LC GR+ DAE +L +M+ G P TY + + D KL ++M
Sbjct: 438 AFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEM 497
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ D VP + TYN L+ F +M + + + + E+ + ++ +L+ G C K
Sbjct: 498 QRDGR-VPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHC---K 553
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETL 266
+ + + EKGL+ ++ L
Sbjct: 554 HGSSVDFKIFNGEKGLVSDYASYTAL 579
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 11/261 (4%)
Query: 26 FLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVT 85
F E+++ G PNV +N+L++G C+ + NA VFDE+ RG+ P V
Sbjct: 213 FYLEVLDYGYPPNVYLFNILMHGFCKIGD----------VMNARMVFDEISRRGLRPSVV 262
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
SF+ ++ Y R+ + + M+ + I P V TY++++ LC R+E+A L EM
Sbjct: 263 SFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEM 322
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
G+ P+ T+ + A++ + MK+ + P++ TYN LI
Sbjct: 323 CEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGI-RPDLITYNALINGLCRDGD 381
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ R++ N + G+ D ++T L+ G C+ A + M+E+G+ V F
Sbjct: 382 LKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTA 441
Query: 266 LYRGLIQSDMLRTWRRLKKKL 286
L GL + +R R+ K +
Sbjct: 442 LISGLCRDGRVRDAERMLKDM 462
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT +I +CK + M + L EM G P VVTYN L+NG C++ +
Sbjct: 469 PDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQM------ 522
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+NA+ + M + P+ +F+I+L + + S+D F EKG+ A+
Sbjct: 523 ----KNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGS---SVDFKIFNGEKGLVSDYAS 575
Query: 122 YTSVV 126
YT++V
Sbjct: 576 YTALV 580
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 131/255 (51%), Gaps = 11/255 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N++ +TSL+YGWC++ ++ A+ L +M E G EP++V Y LL+G +
Sbjct: 251 NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA------ 304
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+A + +MR RG EP+ +++++ + + + ++ M+ V TY
Sbjct: 305 ----DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTY 360
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T++V C G+I+ +L +M++ G+ PS TY + ++ ++L +M++
Sbjct: 361 TALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQ 420
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ P+I YN++I + L + +WN ++ + L +D++ ++I+GL +
Sbjct: 421 IEYH-PDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLL 479
Query: 243 EACQYFVEMIEKGLL 257
EA +F EM+ +GL
Sbjct: 480 EASDHFKEMVTRGLF 494
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 14/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN YT LI CK++R++ A + EM E +VVTY L++G C+
Sbjct: 320 PNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK------- 372
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I V D+M +G+ P ++ ++ + + + L+ + M++ P +
Sbjct: 373 ---IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGI 429
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y V++ C G +++A L EM NG+SP +T+ + A +++M
Sbjct: 430 YNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMV 489
Query: 182 EDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCEK 238
L V T +L+ + +++M +++W+ + KG+ L++ S+T+ IH L K
Sbjct: 490 TRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGA-CELNVLSWTIWIHALFSK 548
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
KEAC Y +EMIE +PQ TF L +GL
Sbjct: 549 GYEKEACSYCIEMIEMDFMPQPDTFAKLMKGL 580
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 133/313 (42%), Gaps = 26/313 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + ++ +CK ++D A + +M E G P+ VTYN L+NG C+ ++ R
Sbjct: 381 PNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRT 440
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
EK + A K+ R RG D S+ ++ Y +
Sbjct: 441 MDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFK 500
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L + MKEK I P+ TY ++ LC CG+ E A L E++ +G+ P T
Sbjct: 501 DGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETT 560
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN Y D A + + +M E+ P++ T NIL+ ++ +++N
Sbjct: 561 YNTILHGYCREGDVEKAFQFHNKMVENSF-KPDVFTCNILLRGLCMEGVLEKALKLFNTW 619
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+D +Y LI LC++ + +A EM EK L P T+ + L S +
Sbjct: 620 VSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRI 679
Query: 277 RTWRRLKKKLDEE 289
R K+ E+
Sbjct: 680 REAEEFMSKMLEK 692
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 134/304 (44%), Gaps = 46/304 (15%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y L+YG+CK+ + A + M + + P+V TYN+L+NG+C
Sbjct: 275 LPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN--------- 325
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I A K+ DEM + PDV S++ +++ K + L M EKG+ P
Sbjct: 326 -EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAV 384
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY---------------R 165
T+ +VK C G+++DA + +M +G SP TYN Y
Sbjct: 385 THNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEM 444
Query: 166 GRKDAN--------------------GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
GRK+ A KL ++ + + +++G F N
Sbjct: 445 GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN- 503
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+D ++W+ +K E+ +Y +I GLC+ K ++A E++E GLLP + T+ T
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563
Query: 266 LYRG 269
+ G
Sbjct: 564 ILHG 567
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 132/282 (46%), Gaps = 11/282 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV + +IYG+C N+ A FL M + P+ VTYN +L+ +C++ L
Sbjct: 205 VPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLG---- 260
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A + +M+ RG+ P+ +++I+++ Y + + + + + M + + P V
Sbjct: 261 ------DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVW 314
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC+ GRIE+A +L EM + P +YN + A KL +M
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E + PN T+NI++ + +MD ++ S D +Y LI+G C+
Sbjct: 375 SEKGV-KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
EA + EM K + VT T+ R L + L +L
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKL 475
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 146/303 (48%), Gaps = 19/303 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + + I + + + A + +M + PN++T N LLN + R S H
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSH----- 187
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ + + F++ GI P+V +F+IV++ Y +K + +++ LN M + P T
Sbjct: 188 --SVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVT 245
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC GR+ DA +LL +M G+ P+ TYN Y A + M
Sbjct: 246 YNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT 305
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+++L +P++ TYN+LI R++ ++ + ++ +L D+ SY LI+G E K
Sbjct: 306 QNNL-LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKI 364
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
EA + EM EKG+ P VT + + W + K+D+ S T ++ +
Sbjct: 365 SEAFKLLEEMSEKGVKPNAVTHNIMVK----------WYCKEGKMDDASNTI-TKMEESG 413
Query: 302 FKP 304
F P
Sbjct: 414 FSP 416
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 129/289 (44%), Gaps = 34/289 (11%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G+ K +D A + EM E+ + P+ VTYN ++ G+C+ + E+ I
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCG------KTEQAIS 544
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+E+ G+ PD T+++ +LH Y R + + N M E P V T ++
Sbjct: 545 K----LNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ LC G +E A +L V G + TYN + A L +M+E +L
Sbjct: 601 RGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHV--KGS--ELGLDLD---------------- 226
P+ +TYN +I R+ E + + KG+ + L LD
Sbjct: 661 -PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDS 719
Query: 227 ---SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+Y+ I LC + K+K+A + F E +KG+ K T+ L GLI+
Sbjct: 720 SSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 140/325 (43%), Gaps = 44/325 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +LI G + ++I A + L EM E+GV+PN VT+N+++ C+
Sbjct: 345 LPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCK--------- 395
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + +A +M G PD +++ +++ Y +A + ++ M K +
Sbjct: 396 -EGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSV 454
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T ++++ LC ++E+A +LL + G +Y Y + + A+KL+ +M
Sbjct: 455 TLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514
Query: 181 KEDD--------------LC--------------------VPNIHTYNILIGMFMALNRM 206
KE + LC +P+ TYN ++ + +
Sbjct: 515 KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDV 574
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + N + + D+ + +L+ GLC + ++A + F + KG VT+ TL
Sbjct: 575 EKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTL 634
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESI 291
L + L L +++E+ +
Sbjct: 635 ITSLCKEGRLDDAFNLLSEMEEKEL 659
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 79/152 (51%), Gaps = 10/152 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++++G+C+ ++ A +F +M+E +P+V T N+LL G+C
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC---------- 604
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A K+F+ +G D +++ ++ + + + + L+ M+EK + P
Sbjct: 605 MEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHY 664
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
TY +++ L GRI +AEE + +M+ G P
Sbjct: 665 TYNAIITALTDSGRIREAEEFMSKMLEKGNLP 696
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 134/268 (50%), Gaps = 12/268 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV ++T+LI + + R+D A L EM ++ ++V YNV ++ + + + +F
Sbjct: 229 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKF- 287
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
F EM+ G+ PD +++ ++ V +A++ +++ +++ P Y
Sbjct: 288 ---------FHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAY 338
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ S G+ ++A LL G PS YNC ++ A++++ +MK
Sbjct: 339 NTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR 398
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D VPN+ TYNILI M +++ EI + ++ + L ++ + ++I LC+ QK +
Sbjct: 399 D--AVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLE 456
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGL 270
EAC F M +K P VTF +L GL
Sbjct: 457 EACSIFEGMDDKVCTPNAVTFSSLIDGL 484
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 124/274 (45%), Gaps = 11/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + Y+ LI+G K + M E+G + YN +++G C+
Sbjct: 576 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGK------ 629
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++ +EM+V+G P V ++ V+ ++ + + K GI V
Sbjct: 630 ----VNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVV 685
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y+S++ GRI++A ++ E+++ G++P+ T+NC ++ N A+ ++ M
Sbjct: 686 VYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSM 745
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K D C PN TY+ILI + + + W ++ L + +YT +I GL +
Sbjct: 746 K-DLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGN 804
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
EA F G +P ++ + GL ++
Sbjct: 805 ILEASGLFSRFKANGGIPDSASYNAMIEGLSSAN 838
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 138/302 (45%), Gaps = 21/302 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y ++ K R++ A R EM +R PNV TYN+L++ +CR L+
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNA--- 422
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++ D+M G+ P+V + +I++ +A K + + M +K P
Sbjct: 423 -------ALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAV 475
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR--GRKDANGAMKLYR 178
T++S++ L CGR++DA L +M+ G P A Y + + GRK+ K+Y+
Sbjct: 476 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKE--DGHKIYK 533
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M C P++ N + + R ++ + D SY++LIHGL +
Sbjct: 534 EMVHTG-CSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKA 592
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES-----ITF 293
E + F M E+G + + + G +S + +L +++ + +T+
Sbjct: 593 GLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTY 652
Query: 294 GS 295
GS
Sbjct: 653 GS 654
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 127/308 (41%), Gaps = 46/308 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P +YTSLI + K R + + EM+ G P++ N ++ V +
Sbjct: 506 VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGE------ 559
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+F E+ G PD S+SI++H +A + + MKE+G
Sbjct: 560 ----TEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTH 615
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +V+ C G++ A +LL EM G P+ TY + A L+ +
Sbjct: 616 AYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 675
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREI---------------WN-----HVKGSE 220
K + + + N+ Y+ LI F + R+D I WN VK E
Sbjct: 676 KSNGIKL-NVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 734
Query: 221 LGLDL---------------DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
+ L +Y++LI+GLC +K+ +A ++ EM + GL P +T+ T
Sbjct: 735 INEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTT 794
Query: 266 LYRGLIQS 273
+ GL ++
Sbjct: 795 MISGLAKA 802
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV +Y+SLI G+ K+ RID A + E++++G+ PNV T+N LL+ + +
Sbjct: 683 NVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK----------A 732
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ I A F M+ P+ ++SI+++ R K + M++ G+ P TY
Sbjct: 733 EEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITY 792
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ L G I +A L NG P + +YN + G AN AM Y +E
Sbjct: 793 TTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIE---GLSSANKAMDAYALFEE 849
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVRE 211
L NIHT ++ + AL++ + + +
Sbjct: 850 TRLKGCNIHTKTCVV-LLDALHKAECLEQ 877
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 17/283 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNV-VTYNVLLNGVCRRASLHPNERFEKTI 65
Y SL+ + D ER L EM G P+ ++ ++ N V R +
Sbjct: 128 YNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSR-----------KL 176
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
R A + MR P ++++I++ S +P L + M+E G V +T++
Sbjct: 177 REAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTL 236
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
++ GR++ A LL EM N + YN + + + K + +MK L
Sbjct: 237 IRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGL 296
Query: 186 CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245
+P+ TY +IG+ NR+D E++ ++ + +Y +I G K+ EA
Sbjct: 297 -MPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAY 355
Query: 246 QYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKK 284
KG +P + + + L + + LR + +K+
Sbjct: 356 GLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR 398
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+ LI G C++ + + A F EM + G++PN +TY +++G+ + +
Sbjct: 752 PNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGN------- 804
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK 99
I A +F + G PD S++ ++ S A+K
Sbjct: 805 ---ILEASGLFSRFKANGGIPDSASYNAMIEGLSSANK 839
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 123/269 (45%), Gaps = 16/269 (5%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
S+I G CK R+D A R M+ G +P+ TYN+L+NG+CR E + A
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSR--------ENRVERA 562
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
+ ++ + G PD +++ + + + ++ L +G V YT++
Sbjct: 563 FALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTG 622
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC G+++ A L EMVR G +P A Y C K A K + +M P
Sbjct: 623 LCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQ-KP 681
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKG----SELGLDLDSYTMLIHGLCEKQKWKEA 244
+ TY L+ AL V E ++ +G EL + Y LIHG C+ K A
Sbjct: 682 TVATYTALV---QALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAA 738
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ F +MI +G +P VT +L+ GL++S
Sbjct: 739 LKLFEDMISRGNVPTAVTSASLFDGLVRS 767
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 141/329 (42%), Gaps = 35/329 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH----- 56
P+ Y ++I G K A + L M+ + P VTY +L+N +C+ +L
Sbjct: 258 PDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEEL 317
Query: 57 ----------PNE--------RFEKT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN F K+ ++ A +FDEM G PDV + ++++ +
Sbjct: 318 FRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCK 377
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + M G P V TYT++++ L GR+ +A ++ M+ +G P + T
Sbjct: 378 SGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVT 437
Query: 157 YNCFFKEY--RGRKDANGAMKLYRQMKEDDLCV--PNIHTYNILI-GMFMALNRMDMVRE 211
Y C + GR D + + E D C PN+ Y+ L+ G+ + + + +
Sbjct: 438 YICLLDGFCKLGRLDEAAQL-----LDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDD 492
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
++ K + LD +I GLC+ + EAC+ F M+ +G P T+ L GL
Sbjct: 493 LFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLC 552
Query: 272 QSDMLRTWRRLKKKLDEESITFGSEFQNY 300
+S R R D E + + + Y
Sbjct: 553 RSRENRVERAFALLHDLEMVGYLPDAVTY 581
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 146/350 (41%), Gaps = 88/350 (25%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +YTSLI+G+ K R+ A EM+E G P+V+T+ V+++G+C+ + F
Sbjct: 328 PNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGN------F 381
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ A K F+EM G +P+V +++ ++ S+ + + + M G P T
Sbjct: 382 EQ----AAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVT 437
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY----------------- 164
Y ++ C GR+++A +LL E+ + SP+ + Y+ K
Sbjct: 438 YICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQS 497
Query: 165 ---------------------RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG----- 198
GR D A +++++M + C P+ TYNILI
Sbjct: 498 KAAAENLDPGLCCSIIVGLCKTGRLDE--ACRIFQRMVSEG-CKPDATTYNILINGLCRS 554
Query: 199 -------MFMALNRMDMVREIWNHVKGSEL--GL-----------------------DLD 226
F L+ ++MV + + V + L GL D+
Sbjct: 555 RENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVV 614
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+YT L GLC + + A F EM+ +G P + + GLI+ L
Sbjct: 615 AYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKL 664
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 115/285 (40%), Gaps = 49/285 (17%)
Query: 25 RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84
R+ GE + G + +V TYN L+N + EK + +EM GI P+
Sbjct: 107 RWAGE--QAGFQHDVFTYNCLMNLLVA----------EKNYSQCYAIHEEMLKAGIAPNT 154
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG----------- 133
SF+I++ ++R + ++ MK K P + T+ +V CLC G
Sbjct: 155 FSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHE 214
Query: 134 -------------------------RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168
R+++A E+ G+M + G P A YN
Sbjct: 215 MMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAG 274
Query: 169 DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
A A+K+ M CVP TY IL+ ++ E++ + S + Y
Sbjct: 275 HAQEALKVLDNMLA-KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIY 333
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
T LIHG + + KEAC F EM+E G P +T + GL +S
Sbjct: 334 TSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKS 378
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 110/275 (40%), Gaps = 47/275 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YT L G CKI +D A + L E RG +VV Y L G+C
Sbjct: 575 LPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLC---------- 624
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ + A +F EM +G PD ++ +++ + K + + + M KG PTVA
Sbjct: 625 YQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVA 684
Query: 121 TYTSVVKCLCSCGRIEDA-EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYT++V+ LC G +++A G + R + S Y+ + + A+KL+
Sbjct: 685 TYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLF-- 742
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
ED + N+ T +F GL
Sbjct: 743 --EDMISRGNVPTAVTSASLF--------------------------------DGLVRSG 768
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
K ++A + EM G P TF + GL +SD
Sbjct: 769 KTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSD 803
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 127/315 (40%), Gaps = 27/315 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PN + LI + + R D A M + +P++ T+ +L++ +C+
Sbjct: 152 PNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEV 211
Query: 54 -------SLHPNERF-----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
P +R K ++ A +VF +M G PD +++ ++ +
Sbjct: 212 FHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLA 271
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A Q +L L+ M K PT TY +V LC G +E AEEL M +G P++
Sbjct: 272 KAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSV 331
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
Y + A L+ +M E P++ T+ ++I + + +
Sbjct: 332 IYTSLIHGFAKSGRMKEACSLFDEMVEAGY-RPDVITHTVMIDGLCKSGNFEQAAKSFEE 390
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ ++ +YT +I GL + + A + MI G P VT+ L G +
Sbjct: 391 MMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGR 450
Query: 276 LRTWRRLKKKLDEES 290
L +L +LD+ S
Sbjct: 451 LDEAAQLLDELDKCS 465
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 11/179 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y +I G K +++ A +F EMI +G +P V TY L+ +C ++ +E F
Sbjct: 646 PDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNV--DEAF 703
Query: 62 EKTIRNAEKVFDEMRVRG-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ F+ M RG + V + ++H + +A K +L M +G PT
Sbjct: 704 HR--------FEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAV 755
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T S+ L G+ E A+ELL EM G P A T+ R ++ +KL ++
Sbjct: 756 TSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 130/267 (48%), Gaps = 11/267 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+T+LI +C+ R+ +A LG+M++ G EP++VT+ L+NG C H N +E
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFC-----HVNRFYE---- 167
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + D++ G EP+V ++ ++ + +LD L MK+ GI P V TY S++
Sbjct: 168 -AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
L G + +L +M+R G+SP T++ Y A K Y +M + +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PNI TYN LI +D +++ N + + +Y LI+G C+ ++ + +
Sbjct: 287 -PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMK 345
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQS 273
M G+ T+ TLY+G Q+
Sbjct: 346 ILCVMSRDGVDGDTFTYNTLYQGYCQA 372
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 152/347 (43%), Gaps = 59/347 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + SL+ G+C +NR A + +++ G EPNVV YN +++ +C + ++
Sbjct: 147 PSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDV 206
Query: 62 EKTIRN-------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
K ++ + ++ +M GI PDV +FS ++ VY +
Sbjct: 207 LKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGK 266
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + N M ++ + P + TY S++ LC G +++A+++L +V G P+A T
Sbjct: 267 EGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVT 326
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDL------------------------------- 185
YN Y K + MK+ M D +
Sbjct: 327 YNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMV 386
Query: 186 ---CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P+++T+NIL+ ++ ++ S+ + + +Y ++I GLC+ K +
Sbjct: 387 SCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVE 446
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
+A F + KG+ P +T+ T+ GL + + R L +K+ +E
Sbjct: 447 DAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +LI G+CK R+D + L M GV+ + TYN L G C+
Sbjct: 322 PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSA---- 377
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AEKV M G+ PD+ +F+I+L K +L +L +++ + T
Sbjct: 378 ------AEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIIT 431
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++K LC ++EDA L + GVSP TY R ++ A +LYR+M+
Sbjct: 432 YNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
Query: 182 EDDLCVP 188
++D +P
Sbjct: 492 KEDGLMP 498
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 16/277 (5%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
+M E P++V ++ LL + + ++E I +F + + GI D+ SF+
Sbjct: 69 DMAESHPLPSIVDFSRLLIAIAKL------NKYEAVI----SLFRHLEMLGISHDLYSFT 118
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
++ + R + L+L L M + G P++ T+ S+V C R +A L+ ++V
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G P+ YN + N A+ + + MK+ + P++ TYN LI +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI-RPDVVTYNSLITRLFHSGTWGV 237
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
I + + + D+ +++ LI ++ + EA + + EMI++ + P VT+ +L
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
Query: 269 GLIQSDMLRTWRR-----LKKKLDEESITFGSEFQNY 300
GL +L ++ + K ++T+ + Y
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGY 334
>gi|147790305|emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
Length = 722
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 11/270 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V +Y + C+ N+ A L M+E+G+ P V+YN +LNG CR E
Sbjct: 397 DVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCR----------E 446
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I A ++FD PDV SF+ +L + + L M+ +G+ V +
Sbjct: 447 NHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSS 506
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T +++ C+ G+I + ELL M+RNG++P+ T+N + A +++R+ +
Sbjct: 507 TCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRN 566
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
PN +YNILI + +V ++ + L D +Y I GLC++ K
Sbjct: 567 TGY-FPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKIS 625
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
A Q +M+E GL P + T+ + Q
Sbjct: 626 VAIQLRDQMLESGLTPTVTIYNTILAAMFQ 655
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 126/281 (44%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT ++ C RI A LG+M + G +P++VTYNV+L R H +
Sbjct: 291 PNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVIL-----RELFHQDRYV 345
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I +V D+ + I PD +++ + + + +++ L ++ G VA
Sbjct: 346 E--IGELLQVIDQ---KEISPDSFTYAALTGGLLKRGQVRVANKLLLYVISAGCTVDVAV 400
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y CLC + +A LL MV G+ P+ +YN + + A++L+ +
Sbjct: 401 YNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFE 460
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P++ ++N ++ M+R + ++ + L++ S T LI C K
Sbjct: 461 WAN-NSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKI 519
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
E + MI GL P VTF L L ++ +L T R+
Sbjct: 520 SECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRI 560
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 88/194 (45%), Gaps = 11/194 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV T LI +C I +I L MI G+ P VVT+N+LL+ +C+ L
Sbjct: 502 NVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLG------ 555
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A ++F E R G P+ TS++I++H R L L M + P TY
Sbjct: 556 ----TAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTY 611
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
S +K LC G+I A +L +M+ +G++P+ YN R + L + M
Sbjct: 612 GSFIKGLCKEGKISVAIQLRDQMLESGLTPTVTIYNTILAAMFQRGKFWDIVSLLKDMTM 671
Query: 183 DDLCVPNIHTYNIL 196
D C PN + IL
Sbjct: 672 DG-CEPNAVSIEIL 684
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 115/245 (46%), Gaps = 11/245 (4%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
++ +G +YN +L +C+ + A + ++ G + S++
Sbjct: 214 LLGKGCLKCAHSYNPILWALCKCGQSY----------TALALLYSLKKMGAVHNAASYTA 263
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+++ +S+ + + L+ MK G P V TYT +VK LC GRI DA ++LG+M + G
Sbjct: 264 LVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEG 323
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P TYN +E + +L + + + ++ P+ TY L G + ++ +
Sbjct: 324 CDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEIS-PDSFTYAALTGGLLKRGQVRVA 382
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ +V + +D+ Y + H LC + K EA M+EKGL+P V++ T+ G
Sbjct: 383 NKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNG 442
Query: 270 LIQSD 274
+ +
Sbjct: 443 FCREN 447
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 130/332 (39%), Gaps = 33/332 (9%)
Query: 2 PNVKMYTSLIYGWCK------INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL 55
P+V Y +L+Y + K I ++ + + G M G PN T+N+LL+G+ +L
Sbjct: 76 PSVNDYNALLYHYLKSSSRHLIVLDELVQVYFG-MKRLGPYPNASTFNILLDGMTSTGNL 134
Query: 56 HPNERFEK-------------------------TIRNAEKVFDEMRVRGIEPDVTSFSIV 90
F + ++ ++ VF+ M P + +++
Sbjct: 135 RAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTLNLL 194
Query: 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+ + S+A + + + KG +Y ++ LC CG+ A LL + + G
Sbjct: 195 ISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGA 254
Query: 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR 210
+A +Y + A + +MK D C PN+ TY +++ R+
Sbjct: 255 VHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDG-CKPNVITYTVIVKFLCDEGRIGDAL 313
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+I + D+ +Y +++ L + ++ E + + +K + P T+ L GL
Sbjct: 314 DILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGL 373
Query: 271 IQSDMLRTWRRLKKKLDEESITFGSEFQNYHF 302
++ +R +L + T N +F
Sbjct: 374 LKRGQVRVANKLLLYVISAGCTVDVAVYNIYF 405
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y S I G CK +I +A + +M+E G+ P V YN +L + +R +F
Sbjct: 606 PDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTVTIYNTILAAMFQRG------KF 659
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ + +M + G EP+ S I+ S+
Sbjct: 660 WDIV----SLLKDMTMDGCEPNAVSIEILKQAMSK 690
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 16/262 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+++ ++ GWC + + A+R ++I +P+VV+Y ++N + ++ L
Sbjct: 240 DIRTMNIILNGWCVLGNVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLG------ 293
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A +++ + G PDV + V+ + +L+ M EKG P V TY
Sbjct: 294 ----KAMELYRALWETGRNPDVKICNNVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTY 349
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNG--VSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
S++K LC R E EL+ EM G SP+ T+ K + KD + ++ +
Sbjct: 350 NSLLKHLCKIRRTEKVWELVEEMEHKGGSCSPNDVTFGYLLKYSQRSKDVDAVLERMAKN 409
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K C YN++ +++ + + VREIW ++ S LG D +YT+ IHGL K K
Sbjct: 410 K----CEMTSDLYNLMFRLYVQWDNEEKVREIWGEMERSGLGPDQRTYTIRIHGLHTKGK 465
Query: 241 WKEACQYFVEMIEKGLLPQKVT 262
EA YF EM+ KG++P+ T
Sbjct: 466 IGEALSYFQEMMSKGMVPEPRT 487
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 78/185 (42%), Gaps = 23/185 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+VK+ ++I C RI A EM E+G PNVVTYN LL +C+
Sbjct: 309 PDVKICNNVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCK---------- 358
Query: 62 EKTIRNAEKVF---DEMRVRG--IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
IR EKV+ +EM +G P+ +F +L R+ L+++ K C
Sbjct: 359 ---IRRTEKVWELVEEMEHKGGSCSPNDVTFGYLLKYSQRSKDVDAVLERM----AKNKC 411
Query: 117 P-TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175
T Y + + E E+ GEM R+G+ P TY + A+
Sbjct: 412 EMTSDLYNLMFRLYVQWDNEEKVREIWGEMERSGLGPDQRTYTIRIHGLHTKGKIGEALS 471
Query: 176 LYRQM 180
+++M
Sbjct: 472 YFQEM 476
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 2/201 (0%)
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+V DEM R D ++ ++L+ Y+ AHK ++ +E GI + + ++ L
Sbjct: 158 QVVDEMSKRDGFVDEKTYEVLLNRYAAAHKVDEAVGVFERRREFGIEDDLVAFHGLLMWL 217
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C +E AE L R T N + + + A ++++ + C P+
Sbjct: 218 CRYKHVEFAETLFCSR-RREFGCDIRTMNIILNGWCVLGNVHEAKRIWKDIIASK-CKPD 275
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
+ +Y +I ++ E++ + + D+ +I LC K++ EA + F
Sbjct: 276 VVSYGTMINALTKKGKLGKAMELYRALWETGRNPDVKICNNVIDALCFKKRIPEALEVFK 335
Query: 250 EMIEKGLLPQKVTFETLYRGL 270
EM EKG P VT+ +L + L
Sbjct: 336 EMSEKGPSPNVVTYNSLLKHL 356
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 19/273 (6%)
Query: 3 NVKMYTSLIYG-----WCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP 57
+V + +SL+Y K+ R + + + EM +R + TY VLLN R A+ H
Sbjct: 131 SVYISSSLVYNEILDVLGKMRRFEEFHQVVDEMSKRDGFVDEKTYEVLLN---RYAAAH- 186
Query: 58 NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
+ A VF+ R GIE D+ +F +L R + + + L + +
Sbjct: 187 ------KVDEAVGVFERRREFGIEDDLVAFHGLLMWLCRYKHVEFA-ETLFCSRRREFGC 239
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ T ++ C G + +A+ + +++ + P +Y + AM+LY
Sbjct: 240 DIRTMNIILNGWCVLGNVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELY 299
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
R + E P++ N +I R+ E++ + ++ +Y L+ LC+
Sbjct: 300 RALWETGRN-PDVKICNNVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCK 358
Query: 238 KQKWKEACQYFVEMIEKG--LLPQKVTFETLYR 268
++ ++ + EM KG P VTF L +
Sbjct: 359 IRRTEKVWELVEEMEHKGGSCSPNDVTFGYLLK 391
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 145/311 (46%), Gaps = 30/311 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + LI+G+C N + A R + +M E G P+ VTYN +L +C+R+ L
Sbjct: 209 PNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQL------ 262
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +M+ G+ P+ +++I++H Y + + + + + M KG+ P V T
Sbjct: 263 ----TQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWT 318
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN-----CFFKEYRGRKDANGAMKL 176
Y ++V+ LC G+I++A L +M + P TYN CF E+RG ++ A KL
Sbjct: 319 YNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCF--EHRG---SDAAFKL 373
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+MK + N T+NI+I F ++D + + S D +Y +I+G C
Sbjct: 374 VEEMKARGV-KENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYC 432
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK-------LDEE 289
+ K EA + EM KGL T TL + L L K LDE
Sbjct: 433 KAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDE- 491
Query: 290 SITFGSEFQNY 300
+T+G+ Y
Sbjct: 492 -VTYGTLIMGY 501
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 132/288 (45%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y ++I G+CK ++ A + + EM +G++ + T N LL+ +C
Sbjct: 419 PDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMC----------L 468
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
EK + +A + + R RG D ++ ++ Y + + +L MKE GI T+ T
Sbjct: 469 EKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIIT 528
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ LC G+ + A + L E++ G+ P T N Y A + + +M
Sbjct: 529 YNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMV 588
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L P+I T NIL+ ++ ++N +D +Y ++I C++++
Sbjct: 589 EHSL-KPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRL 647
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++A EM K L P + T+ + GL ++ +L K E+
Sbjct: 648 EDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEK 695
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 13/292 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +++ G C +ID A R +M + P+VVTYN L++G
Sbjct: 313 LPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGC----------- 361
Query: 61 FEKTIRNAE-KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
FE +A K+ +EM+ RG++ + + +I++ + K + + + M E G P
Sbjct: 362 FEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDC 421
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY +++ C G++ +A +++ EM R G+ T N K + A L +
Sbjct: 422 FTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMK 481
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
++ + + TY LI + + D ++W +K + + + +Y +I GLC
Sbjct: 482 ARKRGYILDEV-TYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSG 540
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K +A E++EKGL+P + T + G + + K+ E S+
Sbjct: 541 KTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSL 592
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 18/294 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +LI G + D A + + EM RGV+ N VT+N+++ C
Sbjct: 348 VPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCT--------- 398
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E I A V +M G PD +++ +++ Y +A K + ++ M KG+
Sbjct: 399 -EGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTF 457
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +++ +C +++DA L + + G TY Y + A+ A+KL+ +M
Sbjct: 458 TLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEM 517
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
KE + V I TYN +I + D + N + L D + ++IHG C +
Sbjct: 518 KETGI-VATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGA 576
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR-------TWRRLKKKLD 287
++A Q+ +M+E L P T L RGL + ML TW K +D
Sbjct: 577 VEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMD 630
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 123/269 (45%), Gaps = 18/269 (6%)
Query: 22 MAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE 81
+ + +M PN++T N LLN + R S H ++ + +VF + G++
Sbjct: 156 LGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSH-------SLVFSREVFQDAVKLGVQ 208
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
P+V +F+I++H Y + + +L +N M E G CP TY +V+ LC ++ +L
Sbjct: 209 PNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDL 268
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201
L +M +G+ P+ TYN Y K A ++ M + +P++ TYN ++
Sbjct: 269 LLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGM-LPDVWTYNTMVRGLC 327
Query: 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261
++D + + ++ +L D+ +Y LI G E + A + EM +G+ V
Sbjct: 328 DEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGV 387
Query: 262 TFETLYRGLIQSDMLRTWRRLKKKLDEES 290
T + + W + K+DE S
Sbjct: 388 THNIMIK----------WFCTEGKIDEAS 406
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 22/277 (7%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G+ K + D A + EM E G+ ++TYN ++ G+C KT +
Sbjct: 494 YGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSG---------KTDQ 544
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+K+ +E+ +G+ PD ++ +I++H Y + + N M E + P + T ++
Sbjct: 545 AVDKL-NELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILL 603
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ LC G +E L + G TYN + + A L +M+ +L
Sbjct: 604 RGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNL- 662
Query: 187 VPNIHTYNILIGMF-----------MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
P+ +TYN ++ +AL + +++ ELG Y+ I L
Sbjct: 663 EPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSL 722
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
C + K+K+A + F + +KG+ K T+ L GL++
Sbjct: 723 CTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLK 759
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +I+G+C ++ A +F +M+E ++P++ T N+LL G+CR L
Sbjct: 558 VPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGML----- 612
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK + +F+ +G D +++I++ + + + + + D + M+ K + P
Sbjct: 613 -EKGL----TLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRY 667
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNG-------VSPSAETYNCFFKEYRGRKDANG- 172
TY ++V L GR E+AE+L + G SP T + + E G
Sbjct: 668 TYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGK 727
Query: 173 ---AMKLYRQMKEDDLCVPNIHTY 193
AMKL++Q ++ + + N +TY
Sbjct: 728 YKDAMKLFQQAEQKGVSL-NKYTY 750
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 11/274 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +T L+ CK A L M ++G+ PN+ TYN L+ G+ R L
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD---- 415
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A ++F M G++P ++ + + Y ++ +L+ MK KGI P +
Sbjct: 416 ------DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ + L GR +A+++ + G+ P + TYN K Y + + A+KL +M
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E+ C P++ N LI +R+D +++ +K +L + +Y L+ GL + K
Sbjct: 530 MENG-CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+EA + F M++KG P +TF TL+ L ++D
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 147/324 (45%), Gaps = 31/324 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH-PNER 60
PNV +T I + +I+ A L M + G P+VVTY VL++ +C L E
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315
Query: 61 FEK------------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
FEK + + ++ + EM G PDV +F+I++ +
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + D L+ M+++GI P + TY +++ L R++DA EL G M GV P+A T
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT 435
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y F Y D+ A++ + +MK + PNI N + R ++I+ +
Sbjct: 436 YIVFIDYYGKSGDSVSALETFEKMKTKGI-APNIVACNASLYSLAKAGRDREAKQIFYGL 494
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K L D +Y M++ + + EA + EM+E G P + +L L ++D +
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 277 -RTWR---RLKK-KLDEESITFGS 295
W+ R+K+ KL +T+ +
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNT 578
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 130/278 (46%), Gaps = 13/278 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-SLHPNE 59
+PN+ Y +LI G +++R+D A G M GV+P TY V ++ + S+ E
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
FEK M+ +GI P++ + + L+ ++A + + + +K+ G+ P
Sbjct: 455 TFEK-----------MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY ++KC G I++A +LL EM+ NG P N + A K++ +
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
MKE L P + TYN L+ ++ E++ + + ++ L LC+
Sbjct: 564 MKEMKL-KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+ A + +M++ G +P T+ T+ GL+++ ++
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVK 660
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 130/295 (44%), Gaps = 32/295 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------ 54
+P+V Y L+ + K +ID EM E N +T+N++++G+ + +
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 55 ----LHPNERFEKT----------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94
L + F T + A+++F+ M G P+ ++I+++ +
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+A + + M ++G+ P + TY+ +V CLC GR+++ E+ +G++P
Sbjct: 937 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV 996
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE--- 211
YN A+ L+ +MK P+++TYN LI + L MV E
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI---LNLGIAGMVEEAGK 1053
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
I+N ++ + L ++ ++ LI G K + A + M+ G P T+E L
Sbjct: 1054 IYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 11/261 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y LI+ K A MI G P++ TY+ L+ G+ +R
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR---------- 236
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ I + + EM G++P+V +F+I + V RA K + + L M ++G P V TY
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T ++ LC+ +++ A+E+ +M P TY + +D + + + +M++
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D VP++ T+ IL+ + + ++ + +L +Y LI GL +
Sbjct: 357 DGH-VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD 415
Query: 243 EACQYFVEMIEKGLLPQKVTF 263
+A + F M G+ P T+
Sbjct: 416 DALELFGNMESLGVKPTAYTY 436
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 19/267 (7%)
Query: 15 CKINRIDMA----ERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEK 70
CK N + A E+F ++ GV+P + TYN+L+ G+ I A+
Sbjct: 760 CKHNNVSGARTLFEKFTKDL---GVQPKLPTYNLLIGGLLE----------ADMIEIAQD 806
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
VF +++ G PDV +++ +L Y ++ K + M T+ V+ L
Sbjct: 807 VFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV 866
Query: 131 SCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
G ++DA +L +++ + SP+A TY A +L+ M D C PN
Sbjct: 867 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML-DYGCRPN 925
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
YNILI F D ++ + + DL +Y++L+ LC + E YF
Sbjct: 926 CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDML 276
E+ E GL P V + + GL +S L
Sbjct: 986 ELKESGLNPDVVCYNLIINGLGKSHRL 1012
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 131/321 (40%), Gaps = 33/321 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+P+V Y ++I+G K ++ A F +M ++ V P+ VT LL GV + ASL
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVK-ASLIEDAY 697
Query: 56 ------------HPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
P F E I NA + + GI D S + +
Sbjct: 698 KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 757
Query: 94 YSRAHKPQLSLDKL--NFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
YS H L F K+ G+ P + TY ++ L IE A+++ ++ G
Sbjct: 758 YSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI 817
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVR 210
P TYN Y + +LY++M + C N T+NI+I G+ A N D +
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHE-CEANTITHNIVISGLVKAGNVDDALD 876
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ + + +Y LI GL + + EA Q F M++ G P + L G
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 271 IQSDMLRTWRRLKKKLDEESI 291
++ L K++ +E +
Sbjct: 937 GKAGEADAACALFKRMVKEGV 957
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 1/207 (0%)
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
R + + VFD M+ R I+ D ++ + S + + L M+E G
Sbjct: 129 RVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNA 188
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+Y ++ L +A E+ M+ G PS +TY+ R+D + M L ++
Sbjct: 189 YSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKE 248
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ L PN++T+ I I + +++ EI + G D+ +YT+LI LC +
Sbjct: 249 METLGL-KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTAR 307
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETL 266
K A + F +M P +VT+ TL
Sbjct: 308 KLDCAKEVFEKMKTGRHKPDRVTYITL 334
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 1/158 (0%)
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
G++E+ + M + + TY FK + A R+M+E V N ++
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGF-VLNAYS 190
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
YN LI + + E++ + L +Y+ L+ GL +++ EM
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
GL P TF R L ++ + + K++D+E
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG 288
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 122/268 (45%), Gaps = 12/268 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ K + LI G C + + + A LG M G P++VTYN L+ G C+ L
Sbjct: 205 DTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNEL------- 257
Query: 63 KTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++FD+++ G PDV +++ ++ Y +A K Q + L+ M GI PT T
Sbjct: 258 ---KKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVT 314
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +V G + AEE+ G+M+ G P T+ Y N +L+ +M
Sbjct: 315 FNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMN 374
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN TY+ILI NR+ RE+ + ++ Y +I G C+ K
Sbjct: 375 ARGM-FPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA EM +K P K+TF L G
Sbjct: 434 NEAIVIVEEMEKKKCKPDKITFTILIIG 461
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 124/298 (41%), Gaps = 46/298 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YTS+I G+CK ++ A L +M+ G+ P VT+NVL++G + +H
Sbjct: 275 PDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMH----- 329
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE++ +M G PDV +F+ ++ Y R + M +G+ P T
Sbjct: 330 -----TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFT 384
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ LC R+ A ELLG++ + P YN + N A+ + +M
Sbjct: 385 YSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEM- 443
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C P D ++T+LI G C K +
Sbjct: 444 EKKKCKP-----------------------------------DKITFTILIIGHCMKGRM 468
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
EA F +M+ G P K+T +L L+++ M + L + + I G+ +
Sbjct: 469 FEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAHKGQINDGAPLET 526
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 113/321 (35%), Gaps = 49/321 (15%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y L CK D+A + M G+ PN L++ + LH
Sbjct: 106 YNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATAL----- 160
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP-QLSLDKLNFMKEKGICPTVATYTSV 125
+ V G V S L R +L + L F C T+ +
Sbjct: 161 ----LLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQS----CNDTKTFNIL 212
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL 185
++ LC G+ E A ELLG M G P TYN K + + A +++ +K
Sbjct: 213 IRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSG 272
Query: 186 CVPNIHTYNILIGMFMALNRM--------DMVR-----------------------EIWN 214
C P++ TY +I + +M DM+R
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAE 332
Query: 215 HVKGSELGL----DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++G + D+ ++T LI G C + + + + EM +G+ P T+ L L
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 271 IQSDMLRTWRRLKKKLDEESI 291
+ + L R L +L + I
Sbjct: 393 CKENRLLKARELLGQLASKDI 413
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY + + LC G + A ++ M +G+SP++ + + + A L Q
Sbjct: 105 TYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQS 164
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRM-DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
E + C N L+ + L+R+ D ++ H++ D ++ +LI GLC
Sbjct: 165 YEVEGCC---MVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCN-DTKTFNILIRGLCGVG 220
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
K ++A + M G LP VT+ TL +G +S+ L+
Sbjct: 221 KAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELK 258
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 135/272 (49%), Gaps = 15/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + Y +LI G+CKI +I+ AE L +M RGV N + +N +++G CR
Sbjct: 286 PNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHG-------- 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A ++ M GIE D+ +++ + R ++ + + L+ M EKG+ P +
Sbjct: 338 --MVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVS 395
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ G + +A L +M G PS TYN Y A + ++M+
Sbjct: 396 YTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEME 455
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L VP+I+TY L+ ++D+ ++ +K ++ +YT L+ GL ++ +
Sbjct: 456 KKGL-VPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRS 514
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+EA Q + +M+ GL P +TLY L+ S
Sbjct: 515 EEAFQLYDDMLAAGLTPD----DTLYSVLVGS 542
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 11/270 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y+++I +C+ + A E + GVEPN TY L+NG C+
Sbjct: 252 DVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQ-------- 303
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I AE + +M++RG+ + F+ ++ Y R + +L+ M++ GI + TY
Sbjct: 304 --IEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTY 361
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ LC R+EDA++LL M GV+P+ +Y + D A +L+R M E
Sbjct: 362 NTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDM-E 420
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P++ TYN++I ++ + ++ L D+ +Y L+HG C K
Sbjct: 421 GKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVD 480
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
A + F EM +G P V + L GL +
Sbjct: 481 VALRLFEEMKHRGTKPNVVAYTALVSGLAK 510
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 137/289 (47%), Gaps = 11/289 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y SL+ + + D L EM RGVEP V TY +L++G+ R
Sbjct: 182 NACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGD-------- 233
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I E V+DEM+ + + DV +S V++ Y R + + + + G+ P TY
Sbjct: 234 --ISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTY 291
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C G+IE AE LL +M GV + +N Y A+++ M++
Sbjct: 292 GALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEK 351
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ + +I+TYN L +NRM+ +++ + + + + SYT LI ++
Sbjct: 352 MGIEL-DIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMV 410
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EA + F +M KG P VT+ + G I++ +R R KK+++++ +
Sbjct: 411 EARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGL 459
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 28/284 (9%)
Query: 18 NRIDMAERFLGEMIER---GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74
++ A LG+ I V P ++ +V+++G C+ S + +A + DE
Sbjct: 126 GQLPAAADLLGKAIASCPASVTP--LSASVVVDGFCKSGS----------VDDAHGLLDE 173
Query: 75 MRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR 134
+ G+ + ++ +L Y+R L M+ +G+ PTV TYT +V L G
Sbjct: 174 LPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGD 233
Query: 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMKEDDLCV-----P 188
I E + EM R V+ Y+ Y RG + R + D CV P
Sbjct: 234 ISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGG-------NVRRASEVFDECVGHGVEP 286
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
N TY LI F + +++ + ++ +G + + +I G C ++A +
Sbjct: 287 NERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIK 346
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
M + G+ T+ TL GL + + + ++L + E+ +
Sbjct: 347 AVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVA 390
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y L++G C ++D+A R EM RG +PNVV Y L++G+ +
Sbjct: 460 VPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAK--------- 510
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIV---LHVYSR 96
E A +++D+M G+ PD T +S++ LH SR
Sbjct: 511 -EGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSR 548
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 152/355 (42%), Gaps = 62/355 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V YT LI ID A R L EM+ RG++P++ TYNV++ G+C+R + F
Sbjct: 214 PTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEF 273
Query: 62 EKTIRN----------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK 99
+ E++ +M V+G EP++ ++S+++ R K
Sbjct: 274 VSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGK 333
Query: 100 PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC 159
++D L MKEKG+ P Y ++ C G+++ A + +M+ G P YN
Sbjct: 334 AGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNT 393
Query: 160 FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF---------------MALN 204
+ A+ A+ ++++++E C PN +YN + G M N
Sbjct: 394 IMGSLCKKGRADEALNIFKKLEEVG-CPPNASSYNTMFGALWSSGDKIRALTMILEMLSN 452
Query: 205 RMDMVREIWNHVKGS---------ELGLDLD-----------SYTMLIHGLCEKQKWKEA 244
+D R +N + S +GL +D SY +++ GLC+ + +A
Sbjct: 453 GVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDA 512
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ M++ G P + T+ L G+ + WR +L + ++ + Q+
Sbjct: 513 IEVLAVMVDNGCQPNETTYTLLVEGVGYAG----WRSYAVELAKSLVSMNAISQD 563
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 135/318 (42%), Gaps = 42/318 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + T LI G R + A R + E++E+ +P+ YN +++G CR ++RF
Sbjct: 110 PDVILCTKLIKGLFTSKRTEKAVRVM-EILEQYGDPDSFAYNAVISGFCR------SDRF 162
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A +V M+ RG PDV +++I++ K L+L ++ + E PTV T
Sbjct: 163 DA----ANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVIT 218
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ G I+DA LL EM+ G+ P TYN + R + A + +
Sbjct: 219 YTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLN 278
Query: 182 E---------------------------DDL----CVPNIHTYNILIGMFMALNRMDMVR 210
D+ C PNI TY++LI +
Sbjct: 279 TTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAV 338
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++ +K L D Y LI C++ K A + +MI G LP V + T+ L
Sbjct: 339 DVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSL 398
Query: 271 IQSDMLRTWRRLKKKLDE 288
+ + KKL+E
Sbjct: 399 CKKGRADEALNIFKKLEE 416
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y +++ CK R D A ++ E G PN +YN + +
Sbjct: 385 LPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGD------ 438
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
IR + EM G++PD +++ ++ R ++ L M+ PTV
Sbjct: 439 ---KIRALTMIL-EMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVI 494
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+Y V+ LC RI DA E+L MV NG P+ TY
Sbjct: 495 SYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTY 531
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 70/182 (38%), Gaps = 35/182 (19%)
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPS----AETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
LC G+ +A L +MV+ G P + F R K A M++ Q + D
Sbjct: 87 LCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEK-AVRVMEILEQYGDPD 145
Query: 185 ----------LC--------------------VPNIHTYNILIGMFMALNRMDMVREIWN 214
C P++ TYNILIG A ++D+ ++ +
Sbjct: 146 SFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMD 205
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ + +YT+LI +A + EM+ +GL P T+ + RG+ +
Sbjct: 206 QLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRG 265
Query: 275 ML 276
++
Sbjct: 266 LV 267
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 143/294 (48%), Gaps = 26/294 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLN--------GVCRRA 53
PNV +Y ++I C+ ++D A L M + G+ P+V+TYN L+ GV R
Sbjct: 176 PNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARI 235
Query: 54 -------SLHPN--------ERF--EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+HP+ + F E + A+K +DEM R ++P++ +++ +++
Sbjct: 236 LSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCI 295
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ LNFM KG P TY ++V C R++DA ++L M +GV T
Sbjct: 296 HGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFT 355
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN ++ Y N A K+ +M + +P+I+T+N+L+ +++ +
Sbjct: 356 YNTLYQGYCQAGQFNAAEKVLARMVSCGV-LPDIYTFNMLLDGLCEHGKIEKALVKLEDL 414
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ SE + + +Y ++I G+C+ K ++A F + KG+ P +T+ T+ GL
Sbjct: 415 QKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGL 468
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 137/280 (48%), Gaps = 11/280 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+++LI +C+ +R+ +A LG+M++ G EP++VT+ L+NG C H N I+
Sbjct: 111 FSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFC-----HVNR-----IQ 160
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + D++ G EP+V ++ ++ + +LD LN M++ GI P V TY S++
Sbjct: 161 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLI 220
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
L G+ + +L +M+R G+ P T++ + A K Y +M + +
Sbjct: 221 TRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSV- 279
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PNI TYN LI +D +++ N + + +Y L++G C+ ++ +A +
Sbjct: 280 DPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMK 339
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
M G+ T+ TLY+G Q+ ++ ++
Sbjct: 340 ILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARM 379
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y +L+ G+CK R+D A + L M GV+ + TYN L G C+ +
Sbjct: 316 PNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNA---- 371
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AEKV M G+ PD+ +F+++L K + +L KL +++ + T
Sbjct: 372 ------AEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIIT 425
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++K +C ++EDA L + GVSP TY R ++ A +LYR+MK
Sbjct: 426 YNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMK 485
Query: 182 EDDLCVP 188
+DD +P
Sbjct: 486 KDDGLMP 492
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 128/277 (46%), Gaps = 16/277 (5%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
+M E P++V ++ LL + + +++E I +F + + GI D+ SFS
Sbjct: 63 DMAESRPLPSIVDFSRLLVAIAKL------KKYEAVI----SLFRHIEILGISHDLYSFS 112
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
++ + R + L+L L M + G P++ T+ S+V C RI++A L+ ++V
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G P+ YN + + A+ + M++ + P++ TYN LI + +
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGI-RPDVITYNSLITRLFHSGKWGV 231
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
I + + + D+ +++ +I ++ + EA + + EMI++ + P VT+ +L
Sbjct: 232 SARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLIN 291
Query: 269 GLIQSDMLRTWRR-----LKKKLDEESITFGSEFQNY 300
GL +L ++ + K ++T+ + Y
Sbjct: 292 GLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGY 328
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ + L+ G C+ +I+ A L ++ + ++TYN+++ G+C+
Sbjct: 385 LPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCK--------- 435
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
+ +A +F + ++G+ PDV +++ ++
Sbjct: 436 -ANKVEDAWYLFCSLALKGVSPDVITYTTMM 465
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 14/270 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y S+I+ C ++ A L M P++VT+N LL+G C+ A + P
Sbjct: 236 VPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCK-AGMLPR-- 289
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +V +EM I PDV +++I+++ R + Q++ L + +G P V
Sbjct: 290 -------ALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 342
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
YTS+V LC G IE+A +L+ EM G Y+ Y + + A ++ +M
Sbjct: 343 AYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEM 402
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ VP + TYNI++G + + + + + D+ +Y LI GLC+ +
Sbjct: 403 VSINM-VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANR 461
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+EAC EM +G P VT ++ GL
Sbjct: 462 VREACDLADEMASRGCFPNDVTLGSVVFGL 491
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 14/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH-PNER 60
P+V ++ LI+G K D A + M V+P +VTYN +++G+C+ +L E
Sbjct: 95 PDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKAREL 154
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ IR K PD+ +++ +++ + RA + + + MK GI P V
Sbjct: 155 LEEMIRKGGKS---------APDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVL 205
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +V +C G +E+A E+L M G P TYN A ++ + M
Sbjct: 206 TCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM 265
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
C P++ T+N L+ F + E+ + + D+ +YT+L++GLC +
Sbjct: 266 S----CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQ 321
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ A E++ +G +P + + +L GL +S + +L K++
Sbjct: 322 VQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEM 367
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 135/283 (47%), Gaps = 16/283 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERG--VEPNVVTYNVLLNGVCRRASLHPNE 59
P + Y ++I G CK ++ A L EMI +G P++VTYN L+N R +
Sbjct: 130 PEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASR----- 184
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
IR A ++M+ GI PDV + +I++ + + +L+ L+ MK G P V
Sbjct: 185 -----IREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDV 239
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TY S++ LC G++ +A E+L M SP T+N + A+++ +
Sbjct: 240 ITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEE 296
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M +++ +P++ TY IL+ + ++ + + + D+ +YT L+ GLC+
Sbjct: 297 MCRENI-LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSG 355
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ +EA + EM +G V + +L G ++ + R +
Sbjct: 356 EIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREI 398
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 128/309 (41%), Gaps = 62/309 (20%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V YTSL+ G CK I+ A + + EM RG VV Y+ L++G CR ++H
Sbjct: 338 IPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKARE 397
Query: 61 F-------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ +I A + ++ RG PDV +++ ++
Sbjct: 398 ILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLC 457
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A++ + + D + M +G P T SVV LC GR++DA L+ EM R
Sbjct: 458 KANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSR-------- 509
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
++ A PN+ Y LI +RMD + +
Sbjct: 510 -----------KRHA-----------------PNVVVYTSLIDGLCKSDRMDDACMVLDA 541
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
++G + LD +Y LI + + EA + EM+ +G LP T +TL + + +
Sbjct: 542 MRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSV 601
Query: 276 LRTWRRLKK 284
W L++
Sbjct: 602 FE-WTNLEE 609
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 113/252 (44%), Gaps = 20/252 (7%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE--KVFDEMRVRGIEPDVTS 86
+++ G PN+VT+ +L+ G C+ + +R E + DE V PDV
Sbjct: 52 DLLHSGCSPNLVTFKILIRGNCKAG---------QAMRALEFLRALDEFSV---APDVYI 99
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F++++H + P ++ M+ + P + TY +V+ LC G +E A ELL EM+
Sbjct: 100 FNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMI 159
Query: 147 RNG--VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
R G +P TYN + A +MK + P++ T NIL+
Sbjct: 160 RKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN-PDVLTCNILVSGICKDG 218
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
++ EI + +K + D+ +Y +IH LC K EA + M P VTF
Sbjct: 219 DVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFN 275
Query: 265 TLYRGLIQSDML 276
TL G ++ ML
Sbjct: 276 TLLDGFCKAGML 287
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 144/306 (47%), Gaps = 20/306 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +L+ K A R L EM ++GV+P +VT+N+++ +C+ +
Sbjct: 346 LPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEG------K 399
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E+ + EK+ +E G+ PDV +++ ++ Y +A + ++ M KG+
Sbjct: 400 LEEALGKLEKIAEE----GLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF 455
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T +V+ LC R EDAEELL + G P +Y Y + A++L+ QM
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
E L +P+I TYN LI + R+ + N + L D +Y ++IH C++
Sbjct: 516 IERKL-IPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGD 574
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLI-------QSDMLRTWRRLKKKLDEESITF 293
+ A ++ +M+E P VT TL GL + +W KK+D IT+
Sbjct: 575 LENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVD--VITY 632
Query: 294 GSEFQN 299
+ Q+
Sbjct: 633 NTLIQS 638
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 132/272 (48%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI +CK + A + EM+ +G++ + T N +L +C+ +R+
Sbjct: 417 PDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKM------KRY 470
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +AE++ RG PD S+ V+ Y + + P+ +L + M E+ + P+++T
Sbjct: 471 E----DAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIST 526
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K LC R+++A + L E+V G+ P TYN Y D A + + +M
Sbjct: 527 YNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMV 586
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E+ P++ T N L+ ++D +++ +D+ +Y LI +C+
Sbjct: 587 ENSF-KPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDV 645
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
A +F +M KGL P T+ + L ++
Sbjct: 646 DTALHFFDDMEVKGLQPDAFTYNVVLSALSEA 677
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 145/384 (37%), Gaps = 95/384 (24%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
PN + L++ C + A L M G+ P+ VTYN LLN CR
Sbjct: 206 PNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 265
Query: 52 -----RASLHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R + P + T I+ A KV + M G EPD+ +++++ +
Sbjct: 266 LARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQ 325
Query: 97 AHK------------------PQL------------------SLDKLNFMKEKGICPTVA 120
A K P + +L L M++KG+ PT+
Sbjct: 326 AGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLV 385
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ VVK LC G++E+A L ++ G++P TYN Y + A L +M
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445
Query: 181 -----KED---------DLC--------------------VPNIHTYNILIGMFMALNRM 206
K D +LC VP+ +Y ++ +
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNP 505
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ +W+ + +L + +Y LI GLC ++ KEA E++EKGL+P + T+ +
Sbjct: 506 EPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNII 565
Query: 267 YRGLIQSDMLRTWRRLKKKLDEES 290
+ L R K+ E S
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVENS 589
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 20/277 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y +LI G C++ R+ A L E++E+G+ P+ TYN++++ C+
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCK--------- 571
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + NA + ++M +PDV + + +++ K +L EKG V
Sbjct: 572 -EGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVI 630
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR--GRKDANGAMKLYR 178
TY ++++ +C G ++ A +M G+ P A TYN GR + M L++
Sbjct: 631 TYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNM-LHK 689
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMV-REIWNHVKGSELGLD--LDSYTMLIHGL 235
L ++ + + + D+ E + SE D L++Y ++GL
Sbjct: 690 LADSGKLS----QSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGL 745
Query: 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
C + KEA EM++KG+ T+ TL GLI+
Sbjct: 746 CTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 12/238 (5%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
+IE + PN T+N+L++ C + T+ +A M+ G+ PD +++
Sbjct: 199 LIELRLHPNHYTFNLLVHTHCSKG----------TLADALATLSTMQGFGLSPDAVTYNT 248
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+L+ + R + L MK GI PT TY ++V G I+ A +++ M G
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDM 208
P TYN + A +L +M+ +P++ TYN L+ F D
Sbjct: 309 FEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDA 368
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+R + ++ + L ++ +++ LC++ K +EA ++ E+GL P +T+ TL
Sbjct: 369 LR-LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTL 425
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 125/293 (42%), Gaps = 11/293 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNER 60
P + + + + ++ +A + L + R GV P++ N +L+ + R S P
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ VF + + P+ +F++++H + +L L+ M+ G+ P
Sbjct: 193 LD--------VFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAV 244
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ C G + +A LL M R+G++P+ TYN + A K+ M
Sbjct: 245 TYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESM 304
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-DLDSYTMLIHGLCEKQ 239
P++ TYN+L ++D + + ++ L D+ +Y L+ + +
Sbjct: 305 TAYGF-EPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWR 363
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A + EM +KG+ P VT + + L + L +K+ EE +
Sbjct: 364 CSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLA 416
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 131/270 (48%), Gaps = 13/270 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y ++I+G C+ +D A R EMI+ G+ P+VV YN LL G C
Sbjct: 298 PDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGR------- 350
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFM-KEKGICPTVA 120
+ A K +D M V GI +VTS++I+L + D + K+ + P +
Sbjct: 351 ---VGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMV 406
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+++++ LC G + ++L E +G +Y+ + A+KLY ++
Sbjct: 407 TFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKI 466
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D PN H YN LI F ++ +++ + ++ +Y LIHGLC+ +K
Sbjct: 467 SMDSF-KPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEK 525
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ EA ++ EM+EKG + T+ +L RGL
Sbjct: 526 YLEASRFTREMLEKGCMLDVNTYGSLIRGL 555
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 122/266 (45%), Gaps = 10/266 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+S+I G CK R+D A + ++ +PN YN L+NG C+ + +F IR
Sbjct: 443 YSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQAS------KFSDAIR 496
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
V+ +M P +++ ++H +A K + M EKG V TY S++
Sbjct: 497 ----VYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLI 552
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ LC +I+ A L +++ G+ +N + A +L +MKE + C
Sbjct: 553 RGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNC 612
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+ TYN L+ F D +W + + L D+ SY I GLC + E Q
Sbjct: 613 CPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQ 672
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQ 272
EM+ G++P +T+ L R +I+
Sbjct: 673 LLNEMLASGIIPTAITWNILVRAVIK 698
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 32/309 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y++L+ G+ K NR+D A L EM V+P+ V YN LL G R N F
Sbjct: 192 PDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFR------NGEF 245
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC----- 116
EK +R E++ +R G P++ +++++L L KL KE G
Sbjct: 246 EKAMRVWEQL---VRDPGASPNLATYNVMLD----------GLCKLGMFKEAGDVWERMV 292
Query: 117 -----PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
P + TY +++ LC ++ A + EM++ G+ P YN K +
Sbjct: 293 ANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVG 352
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV-KGSELGLDLDSYTM 230
A K + M + N+ +YNI++ +D ++W + K L D+ +++
Sbjct: 353 EAWKFWDSMSVSG--IRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFST 410
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+IHGLCEK ++ Q E G + ++ ++ GL + L +L +K+ +S
Sbjct: 411 MIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDS 470
Query: 291 ITFGSEFQN 299
S N
Sbjct: 471 FKPNSHIYN 479
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 112/276 (40%), Gaps = 49/276 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEM----IERGVEPNVVTYNVLLNGVCRRASLHP 57
P V+ + +L+ + + R A+ F + R + PN+ TYN++L +C R L
Sbjct: 118 PGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLD- 176
Query: 58 NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
A +FD +R RG+ PD
Sbjct: 177 ---------RAVTLFDSLRCRGLAPDRI-------------------------------- 195
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
TY++++ R+++A LL EM V P A YN + AM+++
Sbjct: 196 ---TYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVW 252
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
Q+ D PN+ TYN+++ L ++W + + D+ +Y +IHGLC
Sbjct: 253 EQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCR 312
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
A + + EMI+ GL+P V + +L +G +
Sbjct: 313 STDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHA 348
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 140/305 (45%), Gaps = 20/305 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ Y ++ C +D A + RG+ P+ +TY+ L++G + N R
Sbjct: 157 PNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVK------NNRL 210
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL-NFMKEKGICPTVA 120
+ NA + DEM ++PD ++ +L R + + ++ +++ G P +A
Sbjct: 211 D----NALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLA 266
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC G ++A ++ MV N P TY D + A ++Y +M
Sbjct: 267 TYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEM 326
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L VP++ YN L+ F R+ + W+ + S + ++ SY +++ GL +
Sbjct: 327 IKTGL-VPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGI-RNVTSYNIMLKGLFDGGM 384
Query: 241 WKEACQYFVEMIEK--GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
+A + E++EK L P VTF T+ GL + + + ++ EE+ T G E
Sbjct: 385 VDKATDLW-ELLEKDDSLSPDMVTFSTMIHGLCE----KGFANKSLQILEEARTSGKELD 439
Query: 299 NYHFK 303
+ +
Sbjct: 440 EFSYS 444
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 85/163 (52%), Gaps = 11/163 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
M +V Y SLI G C+ +ID A +++++G++ +VV +N+L++G+C
Sbjct: 542 MLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGK------ 595
Query: 61 FEKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
+ A ++ EM+ + P+V +++ ++ + + + E G+ P +
Sbjct: 596 ----VDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDI 651
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
+Y + +K LCSC R + +LL EM+ +G+ P+A T+N +
Sbjct: 652 ISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVR 694
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 11/135 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERG-VEPNVVTYNVLLNGVCRRASLHPNERF 61
+V M+ LI+G C ++D A + L EM E+ PNVVTYN L++G + F
Sbjct: 579 DVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDG------FYETGCF 632
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+K A ++ + G+ PD+ S++ + ++ + LN M GI PT T
Sbjct: 633 DK----AASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAIT 688
Query: 122 YTSVVKCLCSCGRIE 136
+ +V+ + G I+
Sbjct: 689 WNILVRAVIKYGPIQ 703
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK----GSELGLDLD 226
+ A+ +R++ C P + ++N L+ F+ R + + G + +L
Sbjct: 101 DAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQ 160
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+Y +++ LC + A F + +GL P ++T+ TL G ++++ L
Sbjct: 161 TYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRL 210
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR 51
+P++ Y + I G C NR + L EM+ G+ P +T+N+L+ V +
Sbjct: 648 VPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIK 698
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 132/268 (49%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+ LI+G C+ R++ A + EM+E+G +P+ TY VL+ C
Sbjct: 263 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG-------- 314
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+ DEM + P+V +++I++ R K + + M + G+CP + T
Sbjct: 315 --MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIIT 372
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C G + A +LL M + P+ TYN + + A L R++
Sbjct: 373 FNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVV 432
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ L +P+ TYNIL+ F +++M I+N + + L D ++T LI GLC+ +
Sbjct: 433 DNGL-LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 491
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
++A M++KG+ +VTF L G
Sbjct: 492 EQANGILGSMVKKGISLDEVTFTALIDG 519
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 138/306 (45%), Gaps = 48/306 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+ +T+LI G CK+ R++ A LG M+++G+ + VT+ L++G C+
Sbjct: 473 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 532
Query: 52 ---------RASLHPNERF------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ H F + + A + +M G+ P V + +I++ + R
Sbjct: 533 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 592
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + LSL L MK+ G P V TYT ++ LC+ GR+E+AE +L M GVSP+ T
Sbjct: 593 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 652
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE----- 211
Y K + + A ++ M ++ C PN H Y+ L+ F+ N R
Sbjct: 653 YAVLVKAHVKAGRLDRAFQIVSTMVKNG-CQPNSHIYSALLSGFVLSNTAIGARALSSTG 711
Query: 212 ----------------IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
+ N +K + + D Y L+ GLC++ + EA Q +M++ G
Sbjct: 712 DLDARSLSSEENDNNCLSNEIKKCGVPTE-DLYNFLVVGLCKEGRIIEADQLTQDMVKHG 770
Query: 256 LLPQKV 261
L P K
Sbjct: 771 LFPDKA 776
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 132/275 (48%), Gaps = 11/275 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ Y L+ G C++++ A L +++ G+ P+ VTYN+L++G C+ L+
Sbjct: 403 PNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNM---- 458
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A +F+ M G+EPD +F+ ++ + + + + L M +KGI T
Sbjct: 459 ------AFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVT 512
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ C G+ +D L MV N +A T+NCF N A + +M
Sbjct: 513 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 572
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L VP++ T+ ILI + ++ +K + ++ +YT++I+GLC +
Sbjct: 573 KYGL-VPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRV 631
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+EA M G+ P T+ L + +++ L
Sbjct: 632 EEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 666
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 16/273 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERG--VEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
Y +++ CK + AE F +++ G ++ +V T VL N CRR L E F
Sbjct: 197 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLAN--CRRDDL--GEAF--- 249
Query: 65 IRNAEKVFDEM-RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+VF++M + P+ ++SI++H A + + + M EKG P+ TYT
Sbjct: 250 -----RVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 304
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++K C G + A ++L EM P+ TY A ++R+M +
Sbjct: 305 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 364
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
LC P I T+N LI + + ++ + ++ ++ +Y L+ GLC K +
Sbjct: 365 GLC-PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 423
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
A +++ GLLP +VT+ L G + L
Sbjct: 424 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 456
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 53/206 (25%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNG-------VCRRA- 53
PN Y L+ K R+D A + + M++ G +PN Y+ LL+G + RA
Sbjct: 648 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL 707
Query: 54 ---------SLHPNERFEKTIRN----------------------------AEKVFDEMR 76
SL E + N A+++ +M
Sbjct: 708 SSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMV 767
Query: 77 VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
G+ PD SI+ H Y + K L+ + + + P+ A+Y V+ L + GR++
Sbjct: 768 KHGLFPDKAISSIIEH-YCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQ 826
Query: 137 DAEELLGEMVRNG-------VSPSAE 155
+A++L+ ++VR+ V+PS E
Sbjct: 827 EAQKLVSDLVRHTGIEEEVEVTPSIE 852
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 132/268 (49%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+ LI+G C+ R++ A + EM+E+G +P+ TY VL+ C
Sbjct: 240 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG-------- 291
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+ DEM + P+V +++I++ R K + + M + G+CP + T
Sbjct: 292 --MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIIT 349
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C G + A +LL M + P+ TYN + + A L R++
Sbjct: 350 FNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVV 409
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ L +P+ TYNIL+ F +++M I+N + + L D ++T LI GLC+ +
Sbjct: 410 DNGL-LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 468
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
++A M++KG+ +VTF L G
Sbjct: 469 EQANGILGSMVKKGISLDEVTFTALIDG 496
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 140/322 (43%), Gaps = 64/322 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+ +T+LI G CK+ R++ A LG M+++G+ + VT+ L++G C+
Sbjct: 450 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 509
Query: 52 ---------RASLHPNERF------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ H F + + A + +M G+ P V + +I++ + R
Sbjct: 510 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 569
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + LSL L MK+ G P V TYT ++ LC+ GR+E+AE +L M GVSP+ T
Sbjct: 570 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 629
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR----------- 205
Y K + + A ++ M ++ C PN H Y+ L+ F+ N
Sbjct: 630 YAVLVKAHVKAGRLDRAFQIVSTMVKNG-CQPNSHIYSALLSGFVLSNTAIGARALSSTG 688
Query: 206 --------------------------MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+D +I + +K + + D Y L+ GLC++
Sbjct: 689 DLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTE-DLYNFLVVGLCKEG 747
Query: 240 KWKEACQYFVEMIEKGLLPQKV 261
+ EA Q +M++ GL P K
Sbjct: 748 RIIEADQLTQDMVKHGLFPDKA 769
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 145/336 (43%), Gaps = 61/336 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------- 51
+PNV YT LI C+ +I+ A +M++ G+ P ++T+N L+NG C+
Sbjct: 309 VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQ 368
Query: 52 ------RASLHPN-----ERFEKTIRNAE--KVFDEMRV---RGIEPDVTSFSIVLHVYS 95
+ + PN E E R ++ K F +R G+ PD +++I++ +
Sbjct: 369 LLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC 428
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS---- 151
+ + ++ + N M G+ P T+T+++ LC GR+E A +LG MV+ G+S
Sbjct: 429 KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 488
Query: 152 -------------------------------PSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+A T+NCF N A + +M
Sbjct: 489 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 548
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L VP++ T+ ILI + ++ +K + ++ +YT++I+GLC +
Sbjct: 549 MKYGL-VPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 607
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+EA M G+ P T+ L + +++ L
Sbjct: 608 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 643
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 16/273 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERG--VEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
Y +++ CK + AE F +++ G ++ +V T VL N CRR L E F
Sbjct: 174 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLAN--CRRDDL--GEAF--- 226
Query: 65 IRNAEKVFDEM-RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+VF++M + P+ ++SI++H A + + + M EKG P+ TYT
Sbjct: 227 -----RVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 281
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++K C G + A ++L EM P+ TY A ++R+M +
Sbjct: 282 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 341
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
LC P I T+N LI + + ++ + ++ ++ +Y L+ GLC K +
Sbjct: 342 GLC-PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 400
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
A +++ GLLP +VT+ L G + L
Sbjct: 401 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 433
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 19/143 (13%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+D A + E+ + GV P YN L+ G+C+ E I A+++ +M G
Sbjct: 715 VDHALKIRDEIKKCGV-PTEDLYNFLVVGLCK----------EGRIIEADQLTQDMVKHG 763
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
+ PD SI+ H Y + K L+ + + + P+ A+Y V+ L + GR+++A+
Sbjct: 764 LFPDKAISSIIEH-YCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQ 822
Query: 140 ELLGEMVRNG-------VSPSAE 155
+L+ ++VR+ V+PS E
Sbjct: 823 KLVSDLVRHTGIEEEVEVTPSIE 845
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 136/288 (47%), Gaps = 12/288 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT LI G C+ + A L M++ G PN+ TY +L+ G+C+ +H
Sbjct: 256 YTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIH---------- 305
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + DEM RG+ P V +++ ++ Y ++ + + +L M+ G P TY S++
Sbjct: 306 DARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLI 365
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G+ ++AEELL + G SP+ T+ Y + + A+++ M C
Sbjct: 366 HGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSK-C 423
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
++ Y +LI + + +R+ ++ N + + L ++ YT +I C+ K A +
Sbjct: 424 KLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALE 483
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
F +G P T+ +L GLIQ L L K+ E+ IT G
Sbjct: 484 VFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPG 531
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 145/317 (45%), Gaps = 42/317 (13%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YTSL+ G+ K + A + +M+ G + + TY+VLL +C+ +K +
Sbjct: 602 YTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCK----------QKKLN 651
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + D+M +RG++ ++ +++I++ + K + N M G P+ TYT +
Sbjct: 652 EALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFI 711
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C GRIE+A L+GEM RNGV+P TYN F + A ++M D C
Sbjct: 712 SSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMI-DASC 770
Query: 187 VPNIHTYNILIGMFMALN----------------RMDMVREIWNHVKGSELGLDLDSYTM 230
PN TY +L+ F+ ++ ++D V ++ + L +Y+
Sbjct: 771 EPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSS 830
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ--SDMLRTWRRLKKKLDE 288
+I G C+ + +EAC M+ K + P E +Y LI+ D+ KL E
Sbjct: 831 IIAGFCKATRLEEACVLLDHMLGKDISPN----EEIYTMLIKCCCDI---------KLFE 877
Query: 289 ESITFGSEFQNYHFKPY 305
++ +F + F+P+
Sbjct: 878 KAASFVTNMIECGFQPH 894
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 14/268 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+SLIYG + ++ A + +M E G+ P V+TY L+ G C++ F
Sbjct: 495 PNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKK------HEF 548
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ NA ++F+ M G+ PD +++++ ++ + + + +F+ +KG+ T T
Sbjct: 549 D----NAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAE---EAYSFLVKKGVVLTKVT 601
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS+V G E A L+ +MV G + TY+ + +K N A+ + QM
Sbjct: 602 YTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMT 661
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ NI Y I+I + + D + ++N + S +YT+ I C+ +
Sbjct: 662 LRGV-KGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRI 720
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
+EA EM G+ P VT+ G
Sbjct: 721 EEAGHLIGEMERNGVAPDVVTYNVFING 748
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 131/291 (45%), Gaps = 12/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YT LI G CK RI A L EM RGV P+V TYN +++G C+ L
Sbjct: 286 PNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRL------ 339
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A + M G PD +++ ++H KP + + LN +G PTV T
Sbjct: 340 ----KDALGIKTLMEGNGCNPDDWTYNSLIHGLCGG-KPDEAEELLNGAIARGFSPTVIT 394
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ C +I+DA + M+ + + Y + A ++
Sbjct: 395 FTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIF 454
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L PN+ Y +I + + ++ E++ + + +Y+ LI+GL + QK
Sbjct: 455 ANGLS-PNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKL 513
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A +M E G+ P +T+ TL +G + RL + +++ +T
Sbjct: 514 HKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLT 564
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 135/302 (44%), Gaps = 28/302 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I +CK + +A R+ + E G+E + T N LL G CR L
Sbjct: 180 LPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDL----- 234
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
R A + M + G + S++I++ + +L L M + G P +
Sbjct: 235 -----RKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLH 289
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGR-KDANGAMKLY 177
TYT +++ LC GRI DA LL EM R GV PS TYN Y GR KDA G
Sbjct: 290 TYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALG----I 345
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+ + E + C P+ TYN LI + D E+ N + ++T +I+G C+
Sbjct: 346 KTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCK 404
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
+K +A + ++ ++ K + G++ S +++ K +L E T F
Sbjct: 405 AEKIDDALR-----VKSIMISSKCKLDLQAYGVLISVLIK-----KHRLKEAKDTLNEIF 454
Query: 298 QN 299
N
Sbjct: 455 AN 456
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 127/300 (42%), Gaps = 30/300 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y SLI+G C + D AE L I RG P V+T+ ++NG C+ + R
Sbjct: 356 PDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRV 414
Query: 62 EKT-------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ ++ A+ +E+ G+ P+V ++ ++ Y +
Sbjct: 415 KSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCK 474
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K +L+ + +G P TY+S++ L ++ A L+ +M +G++P T
Sbjct: 475 VGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVIT 534
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + + + + A +L+ M+++ L P+ YN+L AL + E ++ +
Sbjct: 535 YTTLIQGQCKKHEFDNAFRLFEMMEQNGL-TPDEQAYNVLTD---ALCKSGRAEEAYSFL 590
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+ L +YT L+ G + + A +M+ +G T+ L + L + L
Sbjct: 591 VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKL 650
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 117/284 (41%), Gaps = 42/284 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+ YT I +CKI RI+ A +GEM GV P+VVTYNV +NG
Sbjct: 702 PSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFST 761
Query: 52 -----RASLHPN--------ERFEK-TIRNAE-----------------KVFDEMRVRGI 80
AS PN + F K ++ NA ++ + M G+
Sbjct: 762 LKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGL 821
Query: 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140
P ++S ++ + +A + + + L+ M K I P YT ++KC C E A
Sbjct: 822 NPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAAS 881
Query: 141 LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
+ M+ G P E+Y+ D + A L+ + E D N + IL
Sbjct: 882 FVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDY-NHNEVAWKILNDGL 940
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
+ +D+ ++ + ++ +D ++Y+M+ + + E E+
Sbjct: 941 LKAGHVDICSQLLSAMENRHCRIDSETYSMVTNNIHEASGMYES 984
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 142/325 (43%), Gaps = 60/325 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PN+ +TSLI G CK I A L EM+ G +PNV T+ L++G+C+R
Sbjct: 285 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 344
Query: 54 --------SLHPNERF----------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
+ PN E + AE +F M+ +G+ P+V +++ +++ +
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+A + + +N M ++G P + TY + + LC R +A ELL + G+
Sbjct: 405 KAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGV 464
Query: 156 TYNCFFKEYRGRKDANGAMKLY-------------------------RQMKEDDL----- 185
TY +E + D N A+ + ++MKE +
Sbjct: 465 TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLV 524
Query: 186 ----CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+P TY +I + +D+ + ++++K D +Y LI GLC+K
Sbjct: 525 VSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 584
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
EAC+ + MI++GL P +VT TL
Sbjct: 585 DEACKLYEAMIDRGLSPPEVTRVTL 609
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 131/298 (43%), Gaps = 45/298 (15%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
++ + +I R++ A + +M +G+ P+ +T N +L I AE
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELG----------LIEYAE 202
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT-------- 121
VFDEM VRG+ PD +S+ +++ R K Q + L M ++G P AT
Sbjct: 203 NVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTAL 262
Query: 122 ---------------------------YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+TS++ LC G I+ A E+L EMVRNG P+
Sbjct: 263 CENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV 322
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
T+ R A +L+ ++ D PN+HTY +IG + ++++ +++
Sbjct: 323 YTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFS 382
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+K L ++++YT LI+G C+ + A + M ++G +P T+ L +
Sbjct: 383 RMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 440
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 130/292 (44%), Gaps = 27/292 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-HPNE 59
+P+ T ++ C+ ++ A + +MI+ G +PN++ + L++G+C++ S+ E
Sbjct: 249 IPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFE 308
Query: 60 RFEKTIRNAEK--------VFDEMRVRG-----------------IEPDVTSFSIVLHVY 94
E+ +RN K + D + RG +P+V +++ ++ Y
Sbjct: 309 MLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGY 368
Query: 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
+ K + + MKE+G+ P V TYT+++ C G A EL+ M G P+
Sbjct: 369 CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNI 428
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
TYN + A A +L + L + TY ILI N ++ +
Sbjct: 429 YTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGV-TYTILIQEQCKQNDINQALAFFC 487
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + D+ +LI C ++K KE+ + F ++ GL+P K T+ ++
Sbjct: 488 RMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSM 539
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 119/307 (38%), Gaps = 49/307 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PNV YT+LI G CK A + M + G PN+ TYN ++ +C++ S P
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKK-SRAPEAYE 449
Query: 58 --NERF--------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
N+ F + I A F M G E D+ +I++ +
Sbjct: 450 LLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFC 509
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
R K + S + G+ PT TYTS++ C C G I+ A + M R+G P +
Sbjct: 510 RQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSF 569
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL---------IGMFMALNRM 206
TY + + A KLY M + L P + + + L +
Sbjct: 570 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL 629
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D +++W + + L+ LC ++K A +F +++EK +VT
Sbjct: 630 D--KKLW-----------IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAF 676
Query: 267 YRGLIQS 273
+S
Sbjct: 677 TTACSES 683
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 78/185 (42%), Gaps = 17/185 (9%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY-----NCFFKEY 164
M+ +G+ P+ T V++ G IE AE + EM GV P + +Y CF
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV-REIWNHVKGSELGL 223
D + R +P+ T +++ AL +V R IW K +LG
Sbjct: 233 IQEADRWLTGMIQRGF------IPDNATCTLIL---TALCENGLVNRAIWYFRKMIDLGF 283
Query: 224 --DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 281
+L ++T LI GLC+K K+A + EM+ G P T L GL + R
Sbjct: 284 KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 343
Query: 282 LKKKL 286
L KL
Sbjct: 344 LFLKL 348
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
GR+ +A ++ +M G++PS+ T NC + A ++ +M + VP+ +
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGV-VPDSSS 219
Query: 193 YNIL-IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251
Y ++ IG F + R + ++ + D + T+++ LCE A YF +M
Sbjct: 220 YKLMVIGCFRDGKIQEADRWLTGMIQRGFIP-DNATCTLILTALCENGLVNRAIWYFRKM 278
Query: 252 IEKGLLPQKVTFETLYRGLIQSDMLR 277
I+ G P + F +L GL + ++
Sbjct: 279 IDLGFKPNLINFTSLIDGLCKKGSIK 304
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 14/261 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P +K + ++ GWC + A+R E+I ++P++ TY +N + + L
Sbjct: 230 PVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLS----- 284
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+F M +GI PDV + ++ + +L+ M ++G VAT
Sbjct: 285 -----TAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVAT 339
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+E ELL +M GVSP+ TY+ K KD M Q
Sbjct: 340 YNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILKTTEKPKDVISLM----QRM 395
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C + TYN+++ ++++ + V+ +W+ ++ + G D S+T+++HGL K
Sbjct: 396 EKSGCRLDSDTYNLILNLYVSWDYEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHDKL 455
Query: 242 KEACQYFVEMIEKGLLPQKVT 262
EA Y+ M +G+ P+ T
Sbjct: 456 DEALHYYRTMESRGMTPEPRT 476
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTS--FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
K +R ++FDE+ V + VT+ F+++L+ Y+ AHK Q ++D K+ G +
Sbjct: 140 KKVRLMRQLFDEIPVESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDLV 199
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+ ++ LC +E+AE L + ++ P +++N + + A +++ ++
Sbjct: 200 GFQILLMSLCRYKHVEEAEALFLQK-KDEFPPVIKSWNIILNGWCVKGSLADAKRVWNEI 258
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
L P++ TY I ++ +++ + + D+ +I LC K++
Sbjct: 259 IASKL-KPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKR 317
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYR 268
EA + F EM ++G T+ TL +
Sbjct: 318 IPEALEIFGEMNDRGCQADVATYNTLIK 345
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 141/292 (48%), Gaps = 11/292 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P ++ + +++ + K+N+ + EM ++ V T+N+++N +C+
Sbjct: 198 VPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCK--------- 248
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E ++ A+ M G++P+V +++ V+H Y + + + L+ MK +G+ P
Sbjct: 249 -EGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSY 307
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S++ +C G++E+A +L +M G+ P+A TYN Y + D A YR
Sbjct: 308 TYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFG-YRDE 366
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+P + TYN+LI +MD + + S + D +Y +LI+G C
Sbjct: 367 MVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGN 426
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
K+A EMI KG+ P VT+ +L L + + ++ L +K+ E +
Sbjct: 427 AKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGAS 478
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 147/316 (46%), Gaps = 26/316 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC----------- 50
P+ Y SLI G CK +++ A L +M E G+ P VTYN L++G C
Sbjct: 304 PDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGY 363
Query: 51 -----RRASLHPNERF---------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
RRA L + E + A+ + +M GI PD +++I+++ Y R
Sbjct: 364 RDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCR 423
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ + + + M KGI PT+ TYTS++ L R++ A++L +++R G SP
Sbjct: 424 CGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIM 483
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N + + + A L ++M + ++ VP+ TYN L+ +++ RE+ +
Sbjct: 484 FNALIDGHCANGNLDRAFALLKEMDKRNI-VPDEVTYNTLMQGRCREGKVEEARELLKEM 542
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
K + D SY LI G ++ +A EM+ G P +T+ L +GL ++
Sbjct: 543 KRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQG 602
Query: 277 RTWRRLKKKLDEESIT 292
L K++ + IT
Sbjct: 603 DLAEELLKEMVSKGIT 618
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 134/277 (48%), Gaps = 17/277 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V Y LI+ ++D A+ + +M + G+ P+ +TYN+L+NG CR
Sbjct: 373 LPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCG------- 425
Query: 61 FEKTIRNAEKVF---DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
NA+K F DEM +GI+P + +++ +++V S+ ++ + + D + +G P
Sbjct: 426 ------NAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASP 479
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ + +++ C+ G ++ A LL EM + + P TYN + A +L
Sbjct: 480 DLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELL 539
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
++MK + P+ +YN LI + ++ I + + L +Y LI GLC+
Sbjct: 540 KEMKRRGI-RPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCK 598
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
Q+ A + EM+ KG+ P T+ +L G+ + D
Sbjct: 599 NQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVD 635
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 27/265 (10%)
Query: 21 DMAERFLGEMIERG--VEPNVVTYNVLLNGVCRRASLHP-NERFEKTIRNAEKVFDEMRV 77
D+A +F+ + +G ++ + V+ +++LH + E + + VF E+ +
Sbjct: 97 DLALQFVTHIGFKGLDIKTKCLAVAVVSRSPSPKSTLHLLKQTIESRVAGVKDVFHELAI 156
Query: 78 RGIEPDVTSFSIVLHVYSRA----HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
S SIV + RA + + + + MKEKG+ P + T+ +++
Sbjct: 157 TRDRLGTKS-SIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLN 215
Query: 134 RIEDAEELLGEMVRNGVSPSAETYN------CFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
+ E L EM R + + T+N C + + KD G+M ++L V
Sbjct: 216 QTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSM--------ENLGV 267
Query: 188 -PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT--MLIHGLCEKQKWKEA 244
PN+ TYN +I + + R++ R + + +K G++ DSYT LI G+C+ K +EA
Sbjct: 268 KPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNR--GVEPDSYTYGSLISGMCKGGKLEEA 325
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRG 269
+M E GLLP VT+ TL G
Sbjct: 326 SGILEKMKEIGLLPTAVTYNTLIDG 350
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 76/140 (54%), Gaps = 13/140 (9%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y +L+ G C+ +++ A L EM RG+ P+ ++YN L++G +R + N+
Sbjct: 513 VPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDI--NDA 570
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F TIR DEM G P + +++ ++ + + L+ + L M KGI P +
Sbjct: 571 F--TIR------DEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDS 622
Query: 121 TYTSVVKCLCSCGRIEDAEE 140
TY S+++ + G+++D+ E
Sbjct: 623 TYFSLIEGI---GKVDDSSE 639
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 121/271 (44%), Gaps = 31/271 (11%)
Query: 54 SLHPNERFEKT-IRNAEKVFDEMR------VRGIEPDVTSFSIVLHVYSRAHKPQLSLDK 106
+LHPN + + + + D ++ ++ + P+++ I + S K L+L
Sbjct: 43 TLHPNASTDSPLVITHQSLLDSIQSSQWHLIKHLAPNLSPSLISATLLSLHKKSDLALQF 102
Query: 107 LNFMKEKGI-----CPTVATYT------SVVKCLCSC--GRIEDAEELLGEMV----RNG 149
+ + KG+ C VA + S + L R+ +++ E+ R G
Sbjct: 103 VTHIGFKGLDIKTKCLAVAVVSRSPSPKSTLHLLKQTIESRVAGVKDVFHELAITRDRLG 162
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
+ S+ ++ + K + A + + MKE + VP I T+N ++ +F+ LN+ + V
Sbjct: 163 -TKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGV-VPKIETFNAMLSLFLKLNQTETV 220
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
++ + ++ + ++ ++I+ LC++ K K+A + M G+ P VT+ T+ G
Sbjct: 221 WVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHG 280
Query: 270 LIQSDMLRTWRRL-----KKKLDEESITFGS 295
+ R + + ++ +S T+GS
Sbjct: 281 YCSRGRVEGARMVLDIMKNRGVEPDSYTYGS 311
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 139/283 (49%), Gaps = 11/283 (3%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
+ + L++GWC+ D A + + +M E G EP+V +Y + E+
Sbjct: 266 RSFNVLMHGWCRARDFDNARKAMEDMKEHGFEPDVFSYTNFIEAYGH----------ERD 315
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
R ++V +EMR G P+ +++ V+ +A + + +L+ MK G Y+S
Sbjct: 316 FRKVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQLRKALEVYEKMKSDGCVADTPFYSS 375
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ L GR++DA ++ +M + GV TYN A++L ++M ED
Sbjct: 376 MIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNSMISTACAHSREETALRLLKEM-EDG 434
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
C PN+ TY+ L+ M RM +++ + +H+ + + DL +Y++L++ L + K ++A
Sbjct: 435 SCKPNVGTYHRLLKMCCKKKRMKVLKFLLDHMFKNNISPDLATYSLLVNALRKSGKVEDA 494
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
+ EM+ +G P+ T + L L ML R+++ +D
Sbjct: 495 YSFLEEMVLRGFTPKPSTLKKLAGELESKSMLEEKVRVEEWMD 537
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 4/181 (2%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T+ T T V++ L + EDA E G M + GV N A K+
Sbjct: 195 TLETMTKVMRRLARARKHEDAIEAFGRMEKFGVKKDTAALNVLIDALVKGDSVEHAHKVV 254
Query: 178 RQMKEDDLCVP-NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+ K +P + ++N+L+ + D R+ +K D+ SYT I
Sbjct: 255 LEFKG---SIPLSSRSFNVLMHGWCRARDFDNARKAMEDMKEHGFEPDVFSYTNFIEAYG 311
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSE 296
++ +++ Q EM E G P VT+ ++ L ++ LR + +K+ + +
Sbjct: 312 HERDFRKVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQLRKALEVYEKMKSDGCVADTP 371
Query: 297 F 297
F
Sbjct: 372 F 372
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V Y S+I C +R + A R L EM + +PNV TY+ LL C++
Sbjct: 404 DVVTYNSMISTACAHSREETALRLLKEMEDGSCKPNVGTYHRLLKMCCKKK--------- 454
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
++ + + D M I PD+ ++S++++ ++ K + + L M +G P +T
Sbjct: 455 -RMKVLKFLLDHMFKNNISPDLATYSLLVNALRKSGKVEDAYSFLEEMVLRGFTPKPSTL 513
Query: 123 TSVVKCLCSCGRIED---AEELLGEMVRNGVSP 152
+ L S +E+ EE + +N + P
Sbjct: 514 KKLAGELESKSMLEEKVRVEEWMDRFSQNLIRP 546
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 132/268 (49%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y+ LI+G C+ R++ A + EM+E+G +P+ TY VL+ C
Sbjct: 197 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG-------- 248
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A K+ DEM + P+V +++I++ R K + + M + G+CP + T
Sbjct: 249 --MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIIT 306
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C G + A +LL M + P+ TYN + + A L R++
Sbjct: 307 FNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVV 366
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ L +P+ TYNIL+ F +++M I+N + + L D ++T LI GLC+ +
Sbjct: 367 DNGL-LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 425
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
++A M++KG+ +VTF L G
Sbjct: 426 EQANGILGSMVKKGISLDEVTFTALIDG 453
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 139/322 (43%), Gaps = 64/322 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP-NER 60
P+ +T+LI G CK+ R++ A LG M+++G+ + VT+ L++G C+
Sbjct: 407 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 466
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
FE + N A + +M G+ P V + +I++ + R
Sbjct: 467 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 526
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A + LSL L MK+ G P V TYT ++ LC+ GR+E+AE +L M GVSP+ T
Sbjct: 527 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 586
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR----------- 205
Y K + + A ++ M ++ C PN H Y+ L+ F+ N
Sbjct: 587 YAVLVKAHVKAGRLDRAFQIVSTMVKNG-CQPNSHIYSALLSGFVLSNTAIGARALSSTG 645
Query: 206 --------------------------MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
+D +I + +K + + D Y L+ GLC++
Sbjct: 646 DLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTE-DLYNFLVVGLCKEG 704
Query: 240 KWKEACQYFVEMIEKGLLPQKV 261
+ EA Q +M++ GL P K
Sbjct: 705 RIIEADQLTQDMVKHGLFPDKA 726
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 145/336 (43%), Gaps = 61/336 (18%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--------- 51
+PNV YT LI C+ +I+ A +M++ G+ P ++T+N L+NG C+
Sbjct: 266 VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQ 325
Query: 52 ------RASLHPN-----ERFEKTIRNAE--KVFDEMRV---RGIEPDVTSFSIVLHVYS 95
+ + PN E E R ++ K F +R G+ PD +++I++ +
Sbjct: 326 LLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC 385
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS---- 151
+ + ++ + N M G+ P T+T+++ LC GR+E A +LG MV+ G+S
Sbjct: 386 KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 445
Query: 152 -------------------------------PSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+A T+NCF N A + +M
Sbjct: 446 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 505
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L VP++ T+ ILI + ++ +K + ++ +YT++I+GLC +
Sbjct: 506 MKYGL-VPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 564
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+EA M G+ P T+ L + +++ L
Sbjct: 565 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 600
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 16/273 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERG--VEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
Y +++ CK + AE F +++ G ++ +V T VL N CRR L E F
Sbjct: 131 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLAN--CRRDDL--GEAF--- 183
Query: 65 IRNAEKVFDEM-RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123
+VF++M + P+ ++SI++H A + + + M EKG P+ TYT
Sbjct: 184 -----RVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYT 238
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
++K C G + A ++L EM P+ TY A ++R+M +
Sbjct: 239 VLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 298
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
LC P I T+N LI + + ++ + ++ ++ +Y L+ GLC K +
Sbjct: 299 GLC-PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 357
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
A +++ GLLP +VT+ L G + L
Sbjct: 358 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 390
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 19/143 (13%)
Query: 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79
+D A + E+ + GV P YN L+ G+C+ E I A+++ +M G
Sbjct: 672 VDHALKIRDEIKKCGV-PTEDLYNFLVVGLCK----------EGRIIEADQLTQDMVKHG 720
Query: 80 IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAE 139
+ PD SI+ H Y + K L+ + + + P+ A+Y V+ L + GR+++A+
Sbjct: 721 LFPDKAISSIIEH-YCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQ 779
Query: 140 ELLGEMVRNG-------VSPSAE 155
+L+ ++VR+ V+PS E
Sbjct: 780 KLVSDLVRHTGIEEEVEVTPSIE 802
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 148/295 (50%), Gaps = 20/295 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNER 60
P V + S++ K R +MA+ EM++ GV+P+ TYN+L+ G C+ + +
Sbjct: 188 PGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFY 247
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFM--KEKGICPT 118
F F EM +PDV +++ ++ RA K +++ + +N M K K + P
Sbjct: 248 F----------FKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPD 297
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V TYT++++ C +++A ++L EM G+ P+ TYN K + + ++
Sbjct: 298 VVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILE 357
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
QMK D +P+ T+N LI +D +++ ++K E+ D SY++LI LC+K
Sbjct: 358 QMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQK 417
Query: 239 QKWKEACQYFVEMIEKGLL-------PQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+ +A F E+ EK +L P +++ +++ L ++ + R+ ++L
Sbjct: 418 GDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQL 472
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 135/317 (42%), Gaps = 55/317 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y LI G+CK + +D F EM +P+VVTYN L++G+CR
Sbjct: 224 PDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGK------- 276
Query: 62 EKTIRNAEKVFDEM--RVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
I+ A + + M + + + PDV +++ ++ Y R + +LD L M +G+ P +
Sbjct: 277 ---IKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNI 333
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS-PSAETYNCFFKEYRGRKDANGAMKLYR 178
TY +++K LC + + +E+L +M +G S P A T+N + + + A K++
Sbjct: 334 VTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFE 393
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--------------- 223
MK+ ++ + +Y++LI +++ + E+ L
Sbjct: 394 NMKKLEVSADS-ASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCM 452
Query: 224 --------------------------DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
D SY ++I G C++ ++ V M+ + L
Sbjct: 453 FQYLCENGKTKKAERVLRQLMKRGTQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFL 512
Query: 258 PQKVTFETLYRGLIQSD 274
P ++ L G ++ D
Sbjct: 513 PDIDIYDYLIDGFLRKD 529
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 46/292 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V YT+LI G+C+ +D A L EM RG++PN+VTYN L+ G+C +++
Sbjct: 296 PDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEA------QKW 349
Query: 62 EKTIRNAEKVFDEMRVRGIE-PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K +++ ++M+ G PD +F+ +++ + A + MK+ + A
Sbjct: 350 DKM----KEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSA 405
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-------GVSPSAETYNCFFKEYRGRKDANGA 173
+Y+ +++ LC G AE L E+ G P A +Y C F+ A
Sbjct: 406 SYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKA 465
Query: 174 MKLYRQMKEDDLCVPNIHTYNILI-------------GMFMALNRMDMVREIWNHVKGSE 220
++ RQ+ + P +Y I+I G+ + + R D +
Sbjct: 466 ERVLRQLMKRGTQDP--LSYQIVILGHCKEGSYENGYGLLVWMLRRDFLP---------- 513
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
D+D Y LI G K K A + +M++ PQ T+ ++ L++
Sbjct: 514 ---DIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLE 562
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 40/211 (18%)
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S+++ G +++ +L M GVSP T+N R N A ++Y +M
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEML 217
Query: 182 EDDLCVPNIHTYNILIGMFM--------------------------------ALNRMDMV 209
+ P+ +TYNILI F L R +
Sbjct: 218 KTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKI 277
Query: 210 REIWNHVKG-----SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
+ N V G +L D+ +YT LI G C KQ+ EA EM +GL P VT+
Sbjct: 278 KVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYN 337
Query: 265 TLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295
TL +GL ++ + W ++K+ L++ GS
Sbjct: 338 TLIKGLCEA---QKWDKMKEILEQMKGDGGS 365
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 23/273 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P Y + C+ + AER L ++++RG + + ++Y +++ G C+ S
Sbjct: 444 PLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQ-DPLSYQIVILGHCKEGSYE----- 497
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
N + M R PD+ + ++ + R KP L+ + L M + P +T
Sbjct: 498 -----NGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTST 552
Query: 122 YTSVVKCLCSCGRIEDAEELLGEM----VRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ S++ L G + ++ ++ M +R ++ S + F RG +D A K+
Sbjct: 553 WHSILNRLLEQGCVHESAGVIVMMLERNIRQNINFSTKCLQLLFD--RGLQDK--AFKIT 608
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+ ++ CV L AL + + + +K +E +D+ ++I LC+
Sbjct: 609 ELIYKNGFCVKMDEVVQFLCNKRRAL---EACKLLLFSLKNNE-NIDIGLCNIVILDLCK 664
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
K EA E+++KGL + L L
Sbjct: 665 LNKASEAFSLCYELVDKGLHQDLICLNDLVAAL 697
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 149/314 (47%), Gaps = 33/314 (10%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YTSL+ G+ K D A + +M+ G + ++ TY+VLL +C+ +K +
Sbjct: 598 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCK----------QKKLN 647
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + D+M V G++ ++ +++I++ + K + N M G P+ TYT +
Sbjct: 648 EALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFI 707
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
C G+IE+AE L+GEM R+GV+P TY+ F + A ++M D C
Sbjct: 708 SSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMV-DASC 766
Query: 187 VPNIHTYNILIGMFMALNRMDM----VREIWNHVKGSEL----------GLD--LDSYTM 230
PN TY +L+ F+ ++ ++ +WN ++ + + GL+ + +Y+
Sbjct: 767 EPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSS 826
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ--SDMLRTWRRLKKKLDE 288
+I G C+ + +EAC M+ K + P E +Y LI+ D+ + + D
Sbjct: 827 IIAGFCKATRLEEACVLLDHMLGKAISPN----EEIYTMLIKCCCDIKLFGKDVSFVTDM 882
Query: 289 ESITFGSEFQNYHF 302
F + ++YH+
Sbjct: 883 IEFGFQPQLESYHY 896
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 137/288 (47%), Gaps = 12/288 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT LI G + + A + M++ G N+ Y +L+ G+C+ +H
Sbjct: 252 YTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIH---------- 301
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + DEM +RG+ P V +++ ++ Y ++ + + +L M++ G P TY S++
Sbjct: 302 DARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLI 361
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G++++AEELL + G +P+ T+ Y + + A+++ M + C
Sbjct: 362 YGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSN-C 419
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
++ Y +LI + + R+ +E N + + L ++ YT +I G C+ A +
Sbjct: 420 KLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALE 479
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294
F M +G P T+ +L GLIQ L L K+ E+ IT G
Sbjct: 480 VFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPG 527
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 127/272 (46%), Gaps = 15/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ Y SLIYG C ++D AE L I RG P V+T+ L+NG C+ ER
Sbjct: 352 PDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKA------ERI 404
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +R V M + D+ ++ ++++V + + + + + LN M G+ P V
Sbjct: 405 DDALR----VKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVI 460
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS++ C G + A E+ M G P+A TY K + AM L +M+
Sbjct: 461 YTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQ 520
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
ED + P + Y LI + D ++ ++ + L D +Y +L LC+ +
Sbjct: 521 EDGI-TPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRA 579
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+EA + V KG++ KVT+ +L G ++
Sbjct: 580 EEAYSFLV---RKGVVLTKVTYTSLVDGFSKA 608
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 17/288 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y SLIYG + ++ A + +M E G+ P V+ Y L+ G C++ F
Sbjct: 491 PNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKK------HEF 544
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ NA ++F+ M G+ PD +++++ ++ + + + +F+ KG+ T T
Sbjct: 545 D----NAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAE---EAYSFLVRKGVVLTKVT 597
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS+V G + A L+ +MV G TY+ + +K N A+ + QM
Sbjct: 598 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMT 657
Query: 182 EDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C NI Y I+I + + D + ++N + S +YT+ I C+ +
Sbjct: 658 VSGVKC--NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQ 715
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD-MLRTWRRLKKKLD 287
+EA EM G+ P VT+ G M R + LK+ +D
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVD 763
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 133/295 (45%), Gaps = 25/295 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------- 55
N+ MYT LI G CK RI A L EM RGV P+V TYN +++G C+ +
Sbjct: 283 NLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIK 342
Query: 56 --------HPNERFEKT---------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
+P++ + + AE++ + RG P V +F+ +++ Y +A
Sbjct: 343 ALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAE 402
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
+ +L + M + Y ++ L R+++A+E L EM NG++P+ Y
Sbjct: 403 RIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYT 462
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
Y A+++++ M E + C PN TY LI + ++ + ++
Sbjct: 463 SIIDGYCKVGMVGAALEVFKLM-EHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQE 521
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + +YT LI G C+K ++ A + F M + GL P + + L L +S
Sbjct: 522 DGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKS 576
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 142/333 (42%), Gaps = 48/333 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y ++I +CK + +A R+ + E G++ + T N LL G CR + L
Sbjct: 176 LPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDL----- 230
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
R A + M + G + S++I++ A + +L + M + G +
Sbjct: 231 -----RKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLH 285
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGR-KDANGAMKLY 177
YT ++K LC GRI DA LL EM GV PS TYN Y GR KDA G L
Sbjct: 286 MYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM 345
Query: 178 RQ--MKEDD---------LC-------------------VPNIHTYNILIGMFMALNRMD 207
Q DD LC P + T+ LI + R+D
Sbjct: 346 EQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ +++ S LDL +Y +LI+ L +K + KEA + EM GL P V + ++
Sbjct: 406 DALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSII 465
Query: 268 RGLIQSDMLRTWRRLKKKLDEESI-----TFGS 295
G + M+ + K ++ E T+GS
Sbjct: 466 DGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGS 498
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 126/313 (40%), Gaps = 66/313 (21%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ YT I +CKI +I+ AE +GEM GV P+VVTY++ +NG +
Sbjct: 698 PSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYM------ 751
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR-----AHKPQLS-----------LD 105
++ +++ D EP+ ++ ++L + + AH S
Sbjct: 752 DRAFSTLKRMVDA----SCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQ 807
Query: 106 KLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR 165
L M + G+ PTV TY+S++ C R+E+A LL M+ +SP+ E Y K
Sbjct: 808 LLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIK--- 864
Query: 166 GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-- 223
C +I + + DM+ E G
Sbjct: 865 --------------------CCCDIKLFGKDVSFV-----TDMI----------EFGFQP 889
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
L+SY LI GLC++ + A F +++ +V ++ L GL+++ + +L
Sbjct: 890 QLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLL 949
Query: 284 KKLDEESITFGSE 296
+D SE
Sbjct: 950 AAMDNRHCRIDSE 962
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 136/285 (47%), Gaps = 11/285 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G+C +++ R EM +RG++P++ TYN LL G+C L
Sbjct: 526 YNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLD---------- 575
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A K++DE + G+ ++ ++ I++ Y +A++ + + N + K + Y ++
Sbjct: 576 DAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIII 635
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
K C G + A +LL M G+ P+ TY+ A L +M+++
Sbjct: 636 KAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGF- 694
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VPN+ Y LIG + L +MD W + + + +YT++I G C+ ++A
Sbjct: 695 VPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANN 754
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++M E G++P VT+ L G +++ + ++ ++ E +
Sbjct: 755 LLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGL 799
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 137/322 (42%), Gaps = 40/322 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+V +T++I CK +++ A +M + G+ PNVVTYN ++NG+C+ L
Sbjct: 241 PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL 300
Query: 56 ---------HPNERFEKTIRNA----------EKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN + + N V DEM G P+V F+ ++ Y +
Sbjct: 301 KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCK 360
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +L + M K I PT T S+++ C +IE AE L E++ +G+S +
Sbjct: 361 MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD- 419
Query: 157 YNCF------FKEYRGRKDAN-GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
NC+ K++R M L R + DL + +L+ +
Sbjct: 420 -NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLL------TMLVCGLCKDGKHLEA 472
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
E+W + + LIHGLC K EA + EM+E+GL ++T+ L G
Sbjct: 473 TELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILG 532
Query: 270 LIQSDMLRTWRRLKKKLDEESI 291
+ RL++++ + I
Sbjct: 533 FCNEGKVEGCFRLREEMTKRGI 554
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 143/350 (40%), Gaps = 61/350 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+K Y +LI G K+N D L EMI G PNVV +N L++G C+ ++ +
Sbjct: 311 PNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKI 370
Query: 62 EKT-------------------------IRNAEKVFDEMRVRG--IEPDV---------- 84
+ I +AE +E+ G I PD
Sbjct: 371 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCK 430
Query: 85 -----TSFSIVLHVYSRAHKP-----------------QLSLDKLNF-MKEKGICPTVAT 121
++F + SR +P L +L F + EKG + T
Sbjct: 431 KFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVT 490
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+++ LC G++ +A ++ EM+ G+ TYN + G +L +M
Sbjct: 491 SNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMT 550
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I+TYN L+ + ++D ++W+ K S L ++ +Y +++ G C+ +
Sbjct: 551 KRGI-QPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 609
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++ F E++ K + + + + + Q+ + +L + + + I
Sbjct: 610 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGI 659
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 104/247 (42%), Gaps = 47/247 (19%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
+ +G P++ T N LL +SL FEK +VF M G PDV SF+
Sbjct: 200 LARKGTFPSLKTCNFLL------SSLVKANEFEKCC----EVFRVMS-EGACPDVFSFTN 248
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
V++ + K + +++ M++ GI P V TY ++ LC GR+++A EL +M G
Sbjct: 249 VINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKG 308
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
V P N+ TY LI + LN D V
Sbjct: 309 VQP------------------------------------NLKTYGALINGLIKLNFFDKV 332
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + + GS ++ + LI G C+ + A + MI K + P VT +L +G
Sbjct: 333 NHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQG 392
Query: 270 LIQSDML 276
+SD +
Sbjct: 393 FCKSDQI 399
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y+SLI+G C I ++ A+ + EM + G PNVV Y L+ G C+ +
Sbjct: 660 LPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMD---- 715
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
AE + EM I P+ ++++++ Y + + + + L MKE GI P V
Sbjct: 716 ------TAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVV 769
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
TY + C +++A ++ +M G+ TY
Sbjct: 770 TYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITY 806
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 10/126 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV YT+LI G+CK+ ++D AE EMI + PN TY V+++G C+ ++
Sbjct: 695 VPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNM----- 749
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A + +M+ GI PDV +++++ + + +A+ + + M +G+
Sbjct: 750 -----EKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEI 804
Query: 121 TYTSVV 126
TYT++V
Sbjct: 805 TYTTLV 810
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 37/225 (16%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A VF + +G P + + + +L +A++ + + M E G CP V ++T+V+
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVIN 251
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
LC G++E+A EL +M + G+SP
Sbjct: 252 ALCKGGKMENAIELFMKMEKLGISP----------------------------------- 276
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
N+ TYN +I R+D E+ + + +L +Y LI+GL + + +
Sbjct: 277 -NVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHV 335
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EMI G P V F L G + + ++K + ++IT
Sbjct: 336 LDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNIT 380
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 139/292 (47%), Gaps = 13/292 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N +Y +LI G+C++ R+D A + M G P++VTYN+LLN C E
Sbjct: 223 NSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCE----------E 272
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK-PQLSLDKLNFMKEKGICPTVAT 121
+ A ++ + M G+EPD+ S++ +L + +A+ + L + M+ KG+C V +
Sbjct: 273 GMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVV-S 331
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V+ C R EL EM G+ P T+N + + KL +M
Sbjct: 332 YNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMT 391
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + +P+ Y ++ ++D+ ++ + + + D+ SY L++G C+ +
Sbjct: 392 KMRV-LPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRV 450
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
+A F EM KGL P +VT++ + GLI+ + R+ ++ E T
Sbjct: 451 MDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTL 502
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y L+ G+CK N +D A + E ++ +VV+YN ++ C+
Sbjct: 292 PDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCK---------- 341
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ R ++F+EM +GI PD+ +F+I++ + R + L+ M + + P
Sbjct: 342 ARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIF 401
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+VV LC G+++ A + +MV NGV+P +YN + AM L+ +M+
Sbjct: 402 YTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQ 461
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
L P+ TY +++G + ++ + +W+ +
Sbjct: 462 SKGL-YPDEVTYKLIVGGLIRGKKISLACRVWDQM 495
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 133/288 (46%), Gaps = 14/288 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ + + + C+ NR++ A M +G +P+VV+Y ++++ +C +R
Sbjct: 116 VPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNA------KR 169
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F++ A KV+ + +G+ PD + ++ + L+ + + + + G+
Sbjct: 170 FDE----AAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSL 225
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C GR++ A ++ M R G P TYN + A++L M
Sbjct: 226 VYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETM 285
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P++++YN L+ F N +D + ++ D+ SY +I C+ ++
Sbjct: 286 ERSGV-EPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARR 344
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
++ + F EM KG+ P VTF L ++ + +KK LDE
Sbjct: 345 TRKGYELFEEMCGKGIRPDMVTFNILIDAFLREG---STHVVKKLLDE 389
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
M +V Y ++I +CK R EM +G+ P++VT+N+L++ R S H
Sbjct: 326 MCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHV--- 382
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K+ DEM + PD ++ V+ + K ++ M E G+ P V
Sbjct: 383 -------VKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVI 435
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
+Y +++ C R+ DA L EM G+ P TY K + A +++ QM
Sbjct: 436 SYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQM 495
Query: 181 KE 182
E
Sbjct: 496 ME 497
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 10/114 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YT+++ CK ++D+A +M+E GV P+V++YN LLNG C+ +
Sbjct: 396 LPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSR------ 449
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG 114
+ +A +FDEM+ +G+ PD ++ +++ R K L+ + M E+G
Sbjct: 450 ----VMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERG 499
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 113/248 (45%), Gaps = 8/248 (3%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
+I RG TY+ ++ +C PN I + + +M G PD+ +F+
Sbjct: 71 HVIPRGFSLLPFTYSRFISALCSA----PNNINLPLIHS---LLLDMDSLGFVPDIWAFN 123
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
L++ R ++ + +L+ + M KG P V +YT ++ LC+ R ++A ++ ++
Sbjct: 124 TYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDK 183
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G+SP + + A +L + + + V ++ YN LI F + R+D
Sbjct: 184 GLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSL-VYNALIDGFCRMGRVDK 242
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+I + + DL +Y +L++ CE+ EA + M G+ P ++ L +
Sbjct: 243 AMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLK 302
Query: 269 GLIQSDML 276
G +++M+
Sbjct: 303 GFCKANMV 310
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 108/301 (35%), Gaps = 39/301 (12%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y S I K I+ A +M E V YN + + R + LH + +
Sbjct: 13 YRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYR--- 69
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR----------------AHKPQLSLDKLNFM 110
R + P FS++ YSR H L +D L F+
Sbjct: 70 -----------RHVIP--RGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFV 116
Query: 111 KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
P + + + + LC R+E A EL M G P +Y K
Sbjct: 117 ------PDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRF 170
Query: 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
+ A K++R++ + L P+ L+ + R+D+ E+ V + ++ Y
Sbjct: 171 DEAAKVWRRLIDKGLS-PDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNA 229
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
LI G C + +A + M G +P VT+ L + M+ RL + ++
Sbjct: 230 LIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSG 289
Query: 291 I 291
+
Sbjct: 290 V 290
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 142/301 (47%), Gaps = 24/301 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV+ YT LI G+CK ++D A M++ G+ PNVVTY L+ G C L R
Sbjct: 245 PNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRL 304
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV---YSRAHKPQLSLDKLNFMKEKGICPT 118
+++ N+ G+ P+ + S+++ + R + QL L L +KGI
Sbjct: 305 LQSMENS----------GLVPNEWTCSVLIDALCKHERVGEAQLLLGSL---IQKGIKVN 351
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
YTS++ LC GR A+ L+ +V G P A TY+ +K+ + AM +
Sbjct: 352 EIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLD 411
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M E + P+ TY I+I + D ++I + + + + D+ +YT+ + C +
Sbjct: 412 DMMEKGV-QPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHE 470
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGL----IQSDMLRTWRRLKK---KLDEESI 291
+ ++A + M++ G+ P VT+ L G + S T++ + K +EES
Sbjct: 471 GRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESY 530
Query: 292 T 292
T
Sbjct: 531 T 531
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 127/280 (45%), Gaps = 27/280 (9%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N +YTSLI G CK R A+R + ++ +G P+ TY+ L++G+CR +
Sbjct: 351 NEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCR----------Q 400
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K + A V D+M +G++P +++I++ R S L+ M GI P V TY
Sbjct: 401 KELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTY 460
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T V+ C GR+EDAE ++ MV +GV P+ TYN Y + A ++ M
Sbjct: 461 TIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVA 520
Query: 183 DDLCVPNIHTYNILIGMFM----------------ALNRMDMVREIWNHVKGSELGLDLD 226
+ C PN +Y +L+ + + + M + + + +L ++D
Sbjct: 521 NG-CKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEID 579
Query: 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
Y + LC + EA +EM L P + + ++
Sbjct: 580 IYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSI 619
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 13/293 (4%)
Query: 1 MP--NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
MP N++ YT+LI +C + ++R L ++ G P+ Y + G CR L
Sbjct: 67 MPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLL--- 123
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+A ++F M +RG +++ +LH A + ++ M+ G P
Sbjct: 124 -------AHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPD 176
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
Y ++V LC GR +AE LL + + G P+ YN Y D A+ ++
Sbjct: 177 PHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFE 236
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M + C PN+ TY LI F ++D +++ + + L ++ +YT LI G C
Sbjct: 237 RMDVNG-CSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSD 295
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+ A + M GL+P + T L L + + + + L L ++ I
Sbjct: 296 GQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGI 348
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 26/294 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC-----RRA--- 53
P+ YTS + G+C+ + A R M RG TY LL+G+C R A
Sbjct: 105 PDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSV 164
Query: 54 -------SLHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
P+ T+ R AE + + G EP+V ++ ++ Y
Sbjct: 165 FAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCN 224
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+L++D M G P V TYT ++ C +++ A L MV G+ P+ T
Sbjct: 225 VGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVT 284
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
Y + + A +L + M+ L VPN T ++LI R+ + + +
Sbjct: 285 YTALIQGQCSDGQLDCAYRLLQSMENSGL-VPNEWTCSVLIDALCKHERVGEAQLLLGSL 343
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ ++ YT LI GLC+ ++ A + ++ +G +P T+ +L GL
Sbjct: 344 IQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGL 397
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +YTS+I C++ + A F+ M++ G P + +Y +++ +C
Sbjct: 611 PSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCE---------- 660
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH-VYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E +I+ A++VF +M + + ++ I++ + + + + S L+ M+EK P+ A
Sbjct: 661 EGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECS-SLLSVMEEKNYRPSDA 719
Query: 121 TYTSVVKCLCSCGRIEDAEEL 141
Y + G+I DA ++
Sbjct: 720 LYARLT------GKITDANDI 734
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,684,031,814
Number of Sequences: 23463169
Number of extensions: 185897197
Number of successful extensions: 593009
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5607
Number of HSP's successfully gapped in prelim test: 4205
Number of HSP's that attempted gapping in prelim test: 449183
Number of HSP's gapped (non-prelim): 57689
length of query: 307
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 165
effective length of database: 9,027,425,369
effective search space: 1489525185885
effective search space used: 1489525185885
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 76 (33.9 bits)