BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021791
(307 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WP85|PP150_ARATH Pentatricopeptide repeat-containing protein At2g13420,
mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2
SV=1
Length = 509
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/303 (74%), Positives = 263/303 (86%), Gaps = 1/303 (0%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
K+YT LI GWCK+ RIDMAE+FL EMIE G+EPNVVTYNVLLNG+CR ASLHP ERFE+
Sbjct: 208 KVYTILIAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERN 267
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+RNAEKVFDEMR RGIEPDVTSFSIVLH+YSRAHK +L+LDK+ MK KGI PT+ TYTS
Sbjct: 268 VRNAEKVFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTS 327
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
VVKCLCSCGR+E+AEELL MV +G+SPS+ TYNCFFKEY+GRKDANGAM LYR+MK +
Sbjct: 328 VVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMK-NG 386
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
LC P+ TYN+L+G F+ L +M+ V+EIW+ +K SE G DLDSYT L+HGLC K+KWKEA
Sbjct: 387 LCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEA 446
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKP 304
C YFVEMIE+G LPQK+TFETLY+GLIQS+ +RTWRRLKKKLDEESITFGSEFQ Y F+P
Sbjct: 447 CGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKKKLDEESITFGSEFQRYPFEP 506
Query: 305 YRR 307
Y+R
Sbjct: 507 YKR 509
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P ++ YTS++ C R++ AE L M+E G+ P+ TYN R
Sbjct: 320 PTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGR--------- 370
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K A ++ +M+ +P +++++L + K + + + +K P + +
Sbjct: 371 -KDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDS 429
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YTS+V LCS + ++A EM+ G P T+ Y+G +N M+ +R++K
Sbjct: 430 YTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETL---YKGLIQSN-KMRTWRRLK 485
Query: 182 E 182
+
Sbjct: 486 K 486
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
M ++N K E G D YT+LI G C+ ++ A ++ VEMIE G+ P VT+ L
Sbjct: 191 MAVGVFNERK-EEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNVLL 249
Query: 268 RGLIQSDMLRTWRRLKKKL 286
G+ ++ L R ++ +
Sbjct: 250 NGICRTASLHPEERFERNV 268
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/230 (17%), Positives = 97/230 (42%), Gaps = 37/230 (16%)
Query: 39 VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98
+V + LL+ +C+ + A VF+E R D ++I++ + +
Sbjct: 173 LVEFGFLLDTLCKYGY----------TKMAVGVFNE-RKEEFGSDEKVYTILIAGWCKLR 221
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
+ ++ L M E GI P V TY ++ +C + E
Sbjct: 222 RIDMAEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEE------------------- 262
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
R ++ A K++ +M++ + P++ +++I++ M+ ++ ++ + +K
Sbjct: 263 ------RFERNVRNAEKVFDEMRQRGI-EPDVTSFSIVLHMYSRAHKAELTLDKMKLMKA 315
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
+ +++YT ++ LC + +EA + M+E G+ P T+ ++
Sbjct: 316 KGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFK 365
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ YTSL++G C + A + EMIERG P +T+ L G+ + + R
Sbjct: 425 PDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRL 484
Query: 62 EKTIRNAEKVF-DEMRVRGIEP 82
+K + F E + EP
Sbjct: 485 KKKLDEESITFGSEFQRYPFEP 506
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 160 bits (406), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 148/291 (50%), Gaps = 12/291 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ K Y+ L+ GW +I A + EM+ER +++ YN LL+ +C+
Sbjct: 205 VPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD------ 258
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ K+F EM G++PD SF+I +H Y A + L+ MK + P V
Sbjct: 259 ----VDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVY 314
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ ++K LC +++DA LL EM++ G +P TYN + + N A KL +M
Sbjct: 315 TFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM 374
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ- 239
C+P+ HTYN+++ + + + R D EIW + + + +YT++IHGL K+
Sbjct: 375 DRTK-CLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKG 433
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
K +EAC+YF MI++G+ P T E L L+ + L K++ S
Sbjct: 434 KLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSS 484
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F IV YSRA+ P + N M E GI P V ++ LC + A+E G+
Sbjct: 141 FWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK 200
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
G+ PSA+TY+ + + +DA+GA K++ +M E + CV ++ YN L+ +
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERN-CVVDLLAYNALLDALCKSGDV 259
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D +++ + L D S+ + IH C+ A + M L+P TF +
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 267 YRGLIQSD 274
+ L +++
Sbjct: 320 IKTLCKNE 327
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 119/268 (44%), Gaps = 11/268 (4%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
K++ + + + N A R M+E G++P V + LL+ +C + K
Sbjct: 139 KVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDK----------KH 188
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ +A++ F + + GI P ++SI++ ++R + + M E+ + Y +
Sbjct: 189 VNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNA 248
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ LC G ++ ++ EM G+ P A ++ F Y D + A K+ +MK D
Sbjct: 249 LLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYD 308
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
L VPN++T+N +I ++D + + + D +Y ++ C+ + A
Sbjct: 309 L-VPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRA 367
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
+ M LP + T+ + + LI+
Sbjct: 368 TKLLSRMDRTKCLPDRHTYNMVLKLLIR 395
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 151/290 (52%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI+G N+ A + M++RG +PN+VTY V++NG+C+R
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD------- 165
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + ++M IE DV F+ ++ + +L+ M+ KGI P V T
Sbjct: 166 ---IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 222
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLCS GR DA +LL +M+ ++P+ T+N + A KL+ M
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TYN LI F +R+D ++++ + + DLD+Y LI G C+ ++
Sbjct: 283 KRSI-DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++ + F EM +GL+ VT+ TL +GL +++ K++ + +
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Score = 147 bits (372), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 146/288 (50%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI C R A + L +MIE+ + PN+VT+N L++ +
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK---------- 267
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AEK+ D+M R I+PD+ +++ +++ + + + FM K P + T
Sbjct: 268 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+ED EL EM G+ TY + D + A K+++QM
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + P+I TY+IL+ +++ E++++++ SE+ LD+ YT +I G+C+ K
Sbjct: 388 SDGV-PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
+ F + KG+ P VT+ T+ GL +L+ L KK+ E+
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 494
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 135/280 (48%), Gaps = 11/280 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ Y LI +C+ ++I +A LG+M++ G EP++VT + LLNG C
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH----------G 93
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K I +A + D+M G PD +F+ ++H +K ++ ++ M ++G P + TY
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
VV LC G I+ A LL +M + +N + + A+ L+++M+
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ PN+ TY+ LI + R ++ + + ++ +L ++ LI ++ K+
Sbjct: 214 KGI-RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
EA + +MI++ + P T+ +L G D L +++
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y +LI G+CK R++ EM RG+ + VTY L+ G+ H +
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL-----FHDGD-- 375
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA+KVF +M G+ PD+ ++SI+L K + +L+ ++M++ I +
Sbjct: 376 ---CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++++ +C G+++D +L + GV P+ TYN ++ A L ++MK
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 182 EDDLCVPNIHTYNILI 197
ED +P+ TYN LI
Sbjct: 493 EDG-PLPDSGTYNTLI 507
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 137/306 (44%), Gaps = 18/306 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNE 59
+P++ + L+ K+ + D+ LGE ++R G+ N+ TYN+L+N CRR+
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVIS-LGEKMQRLGISHNLYTYNILINCFCRRSQ----- 60
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
I A + +M G EP + + S +L+ Y + ++ ++ M E G P
Sbjct: 61 -----ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 115
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+T+++ L + +A L+ MV+ G P+ TY R D + A L +
Sbjct: 116 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 175
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ + ++ +N +I +D ++ ++ + ++ +Y+ LI LC
Sbjct: 176 MEAAKI-EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFG 294
+W +A Q +MIEK + P VTF L ++ +L K+ +D + T+
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294
Query: 295 SEFQNY 300
S +
Sbjct: 295 SLINGF 300
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 129/271 (47%), Gaps = 16/271 (5%)
Query: 30 MIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSI 89
M++ P++ +N LL+ + + ++F+ I EK M+ GI ++ +++I
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKM------KKFDLVISLGEK----MQRLGISHNLYTYNI 50
Query: 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149
+++ + R + L+L L M + G P++ T +S++ C RI DA L+ +MV G
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110
Query: 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMV 209
P T+ A+ A+ L +M + C PN+ TY +++ +D+
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ N ++ +++ D+ + +I LC+ + +A F EM KG+ P VT+ +L
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 270 LIQ----SDMLRTWRRL-KKKLDEESITFGS 295
L SD + + +KK++ +TF +
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 10/176 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT+LI G D A++ +M+ GV P+++TY++LL+G+C N + EK
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN------NGKLEK--- 413
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A +VFD M+ I+ D+ ++ ++ +A K D + KG+ P V TY +++
Sbjct: 414 -ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
LCS +++A LL +M +G P + TYN + + D + +L R+M+
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 34.7 bits (78), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 31/72 (43%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I G C + A L +M E G P+ TYN L+ R +
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 522
Query: 62 EKTIRNAEKVFD 73
+ +R+ V D
Sbjct: 523 IREMRSCRFVGD 534
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 152/306 (49%), Gaps = 11/306 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI C R A + L +MIE+ + PN+VT+N L++ +
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK---------- 342
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AEK++D+M R I+PD+ +++ +++ + + + FM K P V T
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+ED EL EM G+ TY + D + A K+++QM
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + P+I TY+IL+ +++ E++++++ SE+ LD+ YT +I G+C+ K
Sbjct: 463 SDGV-PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 521
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
+ F + KG+ P VT+ T+ GL +L+ L KK+ E+ S N
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
Query: 302 FKPYRR 307
+ + R
Sbjct: 582 IRAHLR 587
Score = 147 bits (372), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 149/290 (51%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI+G N+ A + M++RG +PN+VTY V++NG+C+R
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL---- 243
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M IE DV F+ ++ + +L+ M+ KGI P V T
Sbjct: 244 ------ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLCS GR DA +LL +M+ ++P+ T+N + A KLY M
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TYN L+ F +R+D ++++ + + D+ +Y LI G C+ ++
Sbjct: 358 KRSI-DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++ + F EM +GL+ VT+ TL +GL +++ K++ + +
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 133/276 (48%), Gaps = 11/276 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI +C+ ++I +A LG+M++ G EP++VT + LLNG C K I
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH----------GKRIS 172
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + D+M G PD +F+ ++H +K ++ ++ M ++G P + TY VV
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G + A LL +M + +N + + A+ L+++M+ +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI- 291
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+ TY+ LI + R ++ + + ++ +L ++ LI ++ K+ EA +
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ +MI++ + P T+ +L G D L +++
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 136/306 (44%), Gaps = 18/306 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNE 59
+P++ + L+ K+ + D+ LGE ++R + + TYN+L+N CRR+
Sbjct: 82 LPSIVEFNKLLSAIAKMKKFDVVIS-LGEKMQRLEIVHGLYTYNILINCFCRRSQ----- 135
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
I A + +M G EP + + S +L+ Y + ++ ++ M E G P
Sbjct: 136 -----ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+T+++ L + +A L+ MV+ G P+ TY R D + A+ L +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 250
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ + ++ +N +I +D ++ ++ + ++ +Y+ LI LC
Sbjct: 251 MEAAKI-EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 309
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFG 294
+W +A Q +MIEK + P VTF L ++ +L K+ +D + T+
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 295 SEFQNY 300
S +
Sbjct: 370 SLVNGF 375
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 10/176 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
YT+LI G D A++ +M+ GV P+++TY++LL+G+C N + EK +
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN------NGKLEKAL- 490
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+VFD M+ I+ D+ ++ ++ +A K D + KG+ P V TY +++
Sbjct: 491 ---EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
LCS +++A LL +M +G P++ TYN + + D + +L R+M+
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193
+++DA L G MV++ PS +N K + + L +M+ ++ V ++TY
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEI-VHGLYTY 123
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM--LIHGLCEKQKWKEACQYFVEM 251
NILI F +++ + + K +LG + T+ L++G C ++ +A +M
Sbjct: 124 NILINCFCRRSQISLALALLG--KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 252 IEKGLLPQKVTFETLYRGL 270
+E G P +TF TL GL
Sbjct: 182 VEMGYRPDTITFTTLIHGL 200
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I G C + A L +M E G PN TYN L+ R +
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 597
Query: 62 EKTIRNAEKVFD 73
+ +R+ V D
Sbjct: 598 IREMRSCRFVGD 609
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 152/291 (52%), Gaps = 12/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +YT+L+ GWC+ I AE+ EM G+EPNV TY+++++ +CR
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQ------- 305
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A VF +M G P+ +F+ ++ V+ +A + + L N MK+ G P T
Sbjct: 306 ---ISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTIT 362
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +E+A ++L M++ +A T+N F+ ++D NGA ++Y +M
Sbjct: 363 YNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMM 422
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E C PN TYNIL+ MF+ DMV ++ + E+ ++++Y +L+ C W
Sbjct: 423 EAK-CEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHW 481
Query: 242 KEACQYFVEMI-EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + F EM+ EK L P +E + L ++ L+ L +K+ ++ +
Sbjct: 482 NNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 137/289 (47%), Gaps = 12/289 (4%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+++ +T LI + + A M + G P+ + ++++++ + R+
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRK---------- 234
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A+ FD ++ R EPDV ++ ++ + RA + + MK GI P V TY
Sbjct: 235 RRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTY 293
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+ V+ LC CG+I A ++ +M+ +G +P+A T+N + + +++Y QMK+
Sbjct: 294 SIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKK 353
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
C P+ TYN LI ++ ++ N + + ++ ++ + + +K+
Sbjct: 354 LG-CEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVN 412
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + + +M+E P VT+ L R + S ++KK++D++ +
Sbjct: 413 GAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEV 461
Score = 35.0 bits (79), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 40/88 (45%)
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
DD + H YN +I + + + D+ + + +K + + ++++T+LI
Sbjct: 144 DDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLAS 203
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA F M + G +P K+ F + L
Sbjct: 204 EAVHCFNRMEDYGCVPDKIAFSIVISNL 231
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 146/268 (54%), Gaps = 14/268 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y ++ GWC I R A L EM+ERG+ PN+ TYN +L G R IR
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ----------IR 247
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + F EM+ R E DV +++ V+H + A + + + + + M +G+ P+VATY +++
Sbjct: 248 HAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMI 307
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ LC +E+A + EMVR G P+ TYN + + + +L ++M E++ C
Sbjct: 308 QVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM-ENEGC 366
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE--- 243
PN TYN++I + + ++ ++ + + +LD+Y +LI G+ +++ ++
Sbjct: 367 EPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVV 426
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLI 271
A + +EM+E+G +P+K TF + GL+
Sbjct: 427 AGKLLLEMVERGFIPRKFTFNRVLNGLL 454
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 11/226 (4%)
Query: 49 VCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
+ R LHP + MR I P +F+IV Y+ A KP ++
Sbjct: 100 IAARLHLHPT---------VWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFL 150
Query: 109 FMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168
M E G +A++ +++ LC R+E A EL +R S TYN + K
Sbjct: 151 NMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIK 209
Query: 169 DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
A+++ ++M E + PN+ TYN ++ F ++ E + +K + +D+ +Y
Sbjct: 210 RTPKALEVLKEMVERGIN-PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
T ++HG + K A F EMI +G+LP T+ + + L + D
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKD 314
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 106/234 (45%), Gaps = 4/234 (1%)
Query: 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVK 127
A K+F M G D+ SF+ +L V ++ + + + + ++ + TV TY ++
Sbjct: 145 AVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILN 203
Query: 128 CLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187
C R A E+L EMV G++P+ TYN K + A + + +MK+ D C
Sbjct: 204 GWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD-CE 262
Query: 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247
++ TY ++ F + R +++ + + + +Y +I LC+K + A
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 248 FVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYH 301
F EM+ +G P T+ L RGL + L ++++ E FQ Y+
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE--PNFQTYN 374
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y ++I CK + ++ A EM+ RG EPNV TYNVL+ G+ H E
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL-----FHAGE- 350
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E++ M G EP+ ++++++ YS + + +L M P +
Sbjct: 351 ----FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLD 406
Query: 121 TYTSVVKCLCSCGRIED---AEELLGEMVRNGVSPSAETYN 158
TY ++ + R ED A +LL EMV G P T+N
Sbjct: 407 TYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFN 447
>sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470,
mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2
SV=1
Length = 599
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 142/255 (55%), Gaps = 11/255 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YT L+ GWC++ + A R +MI++G++P++V +NV+L G+ R
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLR---------- 345
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A K+F M+ +G P+V S++I++ + + + +++ + M + G+ P A
Sbjct: 346 SRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 405
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + +++ ELL EM G P +TYN K +K A ++Y +M
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMI 465
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++++ P+IHT+N+++ + +M R +W + + D +SYT+LI GL + K
Sbjct: 466 QNEI-EPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKS 524
Query: 242 KEACQYFVEMIEKGL 256
+EAC+Y EM++KG+
Sbjct: 525 REACRYLEEMLDKGM 539
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 56/256 (21%)
Query: 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRN---AEKVFDEMRVRGIEPDVTSFSIVLHV 93
PN++TY VLLNG CR +RN A +++++M +G++PD+ + +++L
Sbjct: 296 PNMMTYTVLLNGWCR-------------VRNLIEAARIWNDMIDQGLKPDIVAHNVMLEG 342
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
R+ K ++ + MK KG CP V +YT +++ C +E A E +MV +G+ P
Sbjct: 343 LLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
A Y LI F ++D V E+
Sbjct: 403 AAVY------------------------------------TCLITGFGTQKKLDTVYELL 426
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ D +Y LI + ++ + A + + +MI+ + P TF + + +
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMA 486
Query: 274 ---DMLRT-WRRLKKK 285
+M R W + KK
Sbjct: 487 RNYEMGRAVWEEMIKK 502
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 25/188 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PNV+ YT +I +CK + ++ A + +M++ G++P+ Y L+ G + L
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 56 --------HPNE-----------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
HP + +K +A +++++M IEP + +F++++ Y
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 485
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A ++ M +KGICP +YT +++ L G+ +A L EM+ G+
Sbjct: 486 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLID 545
Query: 157 YNCFFKEY 164
YN F ++
Sbjct: 546 YNKFAADF 553
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 125/292 (42%), Gaps = 19/292 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ + Y S++ K + + L EM +G+ + T+ + + +A ER
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAM-----KAFAAAKER-- 245
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---KPQLSLDKLNFMKEKGICPTV 119
+ A +F+ M+ + V + + +L RA + Q+ DKL KE+ P +
Sbjct: 246 ---KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL---KER-FTPNM 298
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYT ++ C + +A + +M+ G+ P +N + + + A+KL+
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHV 358
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
MK C PN+ +Y I+I F + M+ E ++ + S L D YT LI G ++
Sbjct: 359 MKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 417
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K + EM EKG P T+ L + + M R+ K+ + I
Sbjct: 418 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEI 469
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 126/272 (46%), Gaps = 22/272 (8%)
Query: 23 AERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE 81
A RF ER G + TYN ++ + L +FE + V +EM +G+
Sbjct: 178 AFRFFCWAAERQGFAHDSRTYNSMM------SILAKTRQFETMV----SVLEEMGTKGL- 226
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC-SCGRIEDAEE 140
+ +F+I + ++ A + + ++ MK+ V T + CL S GR + +E
Sbjct: 227 LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET----INCLLDSLGRAKLGKE 282
Query: 141 --LLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI- 197
+L + ++ +P+ TY + ++ A +++ M + L P+I +N+++
Sbjct: 283 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGL-KPDIVAHNVMLE 341
Query: 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257
G+ + + D ++ +++ +K ++ SYT++I C++ + A +YF +M++ GL
Sbjct: 342 GLLRSRKKSDAIK-LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 258 PQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
P + L G L T L K++ E+
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 25/181 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC-RRASLHPNER 60
P+ +YT LI G+ ++D L EM E+G P+ TYN L+ + ++ H
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ K I+N V++EM +GI PD S+++++
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIG 520
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + + L M +KG+ + Y G+ E EEL +G +AE
Sbjct: 521 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEI 580
Query: 157 Y 157
+
Sbjct: 581 F 581
>sp|Q9LEQ7|PP382_ARATH Pentatricopeptide repeat-containing protein At5g14820,
mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2
SV=1
Length = 598
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 143/255 (56%), Gaps = 11/255 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YT L+ GWC++ + A R +MI+ G++P++V +NV+L G+ R S+ +
Sbjct: 295 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR--SMKKS--- 349
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+F M+ +G P+V S++I++ + + + +++ + M + G+ P A
Sbjct: 350 -----DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 404
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + +++ ELL EM G P +TYN K +K ++Y +M
Sbjct: 405 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMI 464
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++++ P+IHT+N+++ + +M R +W+ + + D +SYT+LI GL + K
Sbjct: 465 QNEI-EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 523
Query: 242 KEACQYFVEMIEKGL 256
+EAC+Y EM++KG+
Sbjct: 524 REACRYLEEMLDKGM 538
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PNV+ YT +I +CK + ++ A + +M++ G++P+ Y L+ G + L
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 424
Query: 56 --------HPNE-----------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
HP + +K + +++++M IEP + +F++++ Y
Sbjct: 425 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 484
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A ++ + M +KGICP +YT +++ L S G+ +A L EM+ G+
Sbjct: 485 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 544
Query: 157 YNCFFKEY 164
YN F ++
Sbjct: 545 YNKFAADF 552
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 125/292 (42%), Gaps = 19/292 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+ + Y S++ K + + L EM +G+ + T+ + + +A ER
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAM-----KAFAAAKER-- 244
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---KPQLSLDKLNFMKEKGICPTV 119
+ A +F+ M+ + V + + +L RA + Q+ DKL KE+ P +
Sbjct: 245 ---KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL---KER-FTPNM 297
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYT ++ C + +A + +M+ +G+ P +N + + A+KL+
Sbjct: 298 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHV 357
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
MK C PN+ +Y I+I F + M+ E ++ + S L D YT LI G ++
Sbjct: 358 MKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 416
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K + EM EKG P T+ L + + M R+ K+ + I
Sbjct: 417 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 468
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 39/267 (14%)
Query: 59 ERFEKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
ERF + A + F R G D +++ ++ + ++ + + + L M KG+
Sbjct: 168 ERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL- 226
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T+ T+T +K + + A + M + ET NC K A L+
Sbjct: 227 TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 286
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL------------ 225
++KE PN+ TY +L+ + + + IWN + L D+
Sbjct: 287 DKLKER--FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR 344
Query: 226 -----------------------DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
SYT++I C++ + A +YF +M++ GL P
Sbjct: 345 SMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 404
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEE 289
+ L G L T L K++ E+
Sbjct: 405 YTCLITGFGTQKKLDTVYELLKEMQEK 431
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 25/181 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC-RRASLHPNER 60
P+ +YT LI G+ ++D L EM E+G P+ TYN L+ + ++ H
Sbjct: 400 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ K I+N V+DEM +GI PD S+++++
Sbjct: 460 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 519
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + + L M +KG+ + Y G+ E EEL +G +AE
Sbjct: 520 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEI 579
Query: 157 Y 157
+
Sbjct: 580 F 580
>sp|Q3EAF8|PP294_ARATH Pentatricopeptide repeat-containing protein At3g62540,
mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2
SV=1
Length = 599
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 143/255 (56%), Gaps = 11/255 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ YT L+ GWC++ + A R +MI+ G++P++V +NV+L G+ R S+ +
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR--SMKKS--- 350
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A K+F M+ +G P+V S++I++ + + + +++ + M + G+ P A
Sbjct: 351 -----DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 405
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++ + +++ ELL EM G P +TYN K +K ++Y +M
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMI 465
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++++ P+IHT+N+++ + +M R +W+ + + D +SYT+LI GL + K
Sbjct: 466 QNEI-EPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 524
Query: 242 KEACQYFVEMIEKGL 256
+EAC+Y EM++KG+
Sbjct: 525 REACRYLEEMLDKGM 539
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
PNV+ YT +I +CK + ++ A + +M++ G++P+ Y L+ G + L
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 56 --------HPNE-----------RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
HP + +K + +++++M IEP + +F++++ Y
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 485
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
A ++ + M +KGICP +YT +++ L S G+ +A L EM+ G+
Sbjct: 486 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 545
Query: 157 YNCFFKEY 164
YN F ++
Sbjct: 546 YNKFAADF 553
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 8/232 (3%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---KPQLSLDKLNFMKEKGICPTV 119
K + A +F+ M+ + V + + +L RA + Q+ DKL KE+ P +
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL---KER-FTPNM 298
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYT ++ C + +A + +M+ +G+ P +N + + A+KL+
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHV 358
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
MK C PN+ +Y I+I F + M+ E ++ + S L D YT LI G ++
Sbjct: 359 MKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 417
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
K + EM EKG P T+ L + + M R+ K+ + I
Sbjct: 418 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 469
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 100/267 (37%), Gaps = 39/267 (14%)
Query: 59 ERFEKTIRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
ERF + A + F R G +++ ++ + ++ + + + L M KG+
Sbjct: 169 ERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL- 227
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T+ T+T +K + + A + M + ET NC K A L+
Sbjct: 228 TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 287
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL------------ 225
++KE PN+ TY +L+ + + + IWN + L D+
Sbjct: 288 DKLKER--FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR 345
Query: 226 -----------------------DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
SYT++I C++ + A +YF +M++ GL P
Sbjct: 346 SMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 405
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEE 289
+ L G L T L K++ E+
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEK 432
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 25/181 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC-RRASLHPNER 60
P+ +YT LI G+ ++D L EM E+G P+ TYN L+ + ++ H
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
Query: 61 FEKTIRN------------------------AEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+ K I+N V+DEM +GI PD S+++++
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 520
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + + L M +KG+ + Y G+ E EEL +G +AE
Sbjct: 521 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEI 580
Query: 157 Y 157
+
Sbjct: 581 F 581
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 145/290 (50%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+L+ G C +R A R L +MI++ + PNV+TY+ LL+ +
Sbjct: 223 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK------- 275
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A+++F+EM I+PD+ ++S +++ + + + M KG V +
Sbjct: 276 ---VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R+ED +L EM + G+ + TYN + + D + A + + QM
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I TYNIL+G ++ I+ ++ E+ LD+ +YT +I G+C+ K
Sbjct: 393 FFGIS-PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+EA F + KGL P VT+ T+ GL +L L K+ +E +
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 127 bits (320), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
+ +I +C ++ +A LG+M++ G EP+ VT L+NG CRR +
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR----------NRVS 172
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
+A + D+M G +PD+ +++ ++ + + + D ++ KGI P V TYT++V
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC+ R DA LL +M++ ++P+ TY+ + A +L+ +M +
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI- 291
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+I TY+ LI +R+D ++++ + D+ SY LI+G C+ ++ ++ +
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQS 273
F EM ++GL+ VT+ TL +G Q+
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQA 378
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 10/185 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ +V Y +LI G+CK R++ + EM +RG+ N VTYN L+ G + + +
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F F +M GI PD+ +++I+L + + +L M+++ + +
Sbjct: 387 F----------FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+V++ +C G++E+A L + G+ P TY + + LY +M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 181 KEDDL 185
K++ L
Sbjct: 497 KQEGL 501
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 111/248 (44%), Gaps = 12/248 (4%)
Query: 59 ERFEKT------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
ER KT + +A +F +M P + F+ +L + K + + M+
Sbjct: 54 ERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV 113
Query: 113 KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG 172
GI + T+ V+ C C C ++ A +LG+M++ G P T + R +
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232
A+ L +M E P+I YN +I R++ + + ++ + ++ +YT L+
Sbjct: 174 AVSLVDKMVEIGY-KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 233 HGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLD 287
+GLC +W +A + +MI+K + P +T+ L +++ + + L + +D
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 288 EESITFGS 295
+ +T+ S
Sbjct: 293 PDIVTYSS 300
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 146/296 (49%), Gaps = 19/296 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +LI G+CK+ +ID + L M +G+EPN+++YNV++NG+CR
Sbjct: 237 LPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR--------- 287
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E ++ V EM RG D +++ ++ Y + +L M G+ P+V
Sbjct: 288 -EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS++ +C G + A E L +M G+ P+ TY + + N A ++ R+M
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ P++ TYN LI +M+ + +K L D+ SY+ ++ G C
Sbjct: 407 NDNGFS-PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD--EESITFG 294
EA + EM+EKG+ P +T+ +L +G + RR K+ D EE + G
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ------RRTKEACDLYEEMLRVG 515
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 143/303 (47%), Gaps = 32/303 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + YT+L+ G+ + ++ A R L EM + G P+VVTYN L+NG C +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM------ 431
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A V ++M+ +G+ PDV S+S VL + R++ +L M EKGI P T
Sbjct: 432 ----EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S+++ C R ++A +L EM+R G+ P TY Y D A++L+ +M
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVRE--------IWNHVKGSEL----------GL 223
E + +P++ TY++LI LN+ RE + S++ +
Sbjct: 548 EKGV-LPDVVTYSVLIN---GLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283
+ S LI G C K EA Q F M+ K P + + G ++ +R L
Sbjct: 604 EFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLY 663
Query: 284 KKL 286
K++
Sbjct: 664 KEM 666
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 146/341 (42%), Gaps = 52/341 (15%)
Query: 1 MPNVKMYTSLIYGWCKINR-IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE 59
MP V Y +++ + R I AE EM+E V PNV TYN+L+ G C
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFC--------- 216
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
F I A +FD+M +G P+V +++ ++ Y + K L M KG+ P +
Sbjct: 217 -FAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL 275
Query: 120 ATYTSVVKCLCSCGRIEDAEELL-----------------------------------GE 144
+Y V+ LC GR+++ +L E
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
M+R+G++PS TY + N AM+ QM+ LC PN TY L+ F
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC-PNERTYTTLVDGFSQKG 394
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
M+ + + + + +Y LI+G C K ++A +M EKGL P V++
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 265 TLYRGLIQS----DMLRTWRRL-KKKLDEESITFGSEFQNY 300
T+ G +S + LR R + +K + ++IT+ S Q +
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 27/286 (9%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----------------RA 53
++ + +++ ID A + G P V++YN +L+ R +
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 54 SLHPNER----------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLS 103
+ PN F I A +FD+M +G P+V +++ ++ Y + K
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 104 LDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163
L M KG+ P + +Y V+ LC GR+++ +L EM R G S TYN K
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 164 YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223
Y + + A+ ++ +M L P++ TY LI M+ E + ++ L
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGL-TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ +YT L+ G +K EA + EM + G P VT+ L G
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 99/228 (43%), Gaps = 41/228 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
P+ YT+LI +C ++ A + EM+E+GV P+VVTY+VL+NG+ +++
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 54 --------SLHPNERFEKTIRN------------------------AEKVFDEMRVRGIE 81
S+ + + I N A++VF+ M + +
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141
PD T+++I++H + RA + + M + G T ++VK L G++ + +
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Query: 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
+ ++R+ AE + + + + + +M +D +PN
Sbjct: 698 IVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF-LPN 744
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 11/191 (5%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF-KEYRGRKDANGAMKL 176
T + + VVK I+ A ++ +G P +YN R +++ + A +
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+++M E + PN+ TYNILI F +D+ +++ ++ ++ +Y LI G C
Sbjct: 193 FKEMLESQVS-PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-------SDMLRTWRRLKKKLDEE 289
+ +K + + M KGL P +++ + GL + S +L R LDE
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE- 310
Query: 290 SITFGSEFQNY 300
+T+ + + Y
Sbjct: 311 -VTYNTLIKGY 320
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 145/272 (53%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI+G N+ A + +M++RG +P++VTY ++NG+C+R
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD------- 238
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + ++M I+ +V F+ ++ + ++++D M+ KGI P V T
Sbjct: 239 ---IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ CLC+ GR DA LL M+ ++P+ T+N + A KL+ +M
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+ TYN+LI F NR+D ++++ + + ++ +Y LI+G C+ ++
Sbjct: 356 QRSI-DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ + F EM ++GL+ VT+ T+ +G Q+
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Score = 138 bits (348), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 145/289 (50%), Gaps = 16/289 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI C R A R L M+E+ + PNVVT+N L++ +
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK---------- 340
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK+ +EM R I+PD +++++++ + ++ + FM K P + T
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT 400
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C C R+ED EL EM + G+ + TY + + D + A +++QM
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 182 EDDLCVP-NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ VP +I TY+IL+ + ++D I+ +++ SE+ L++ Y +I G+C+ K
Sbjct: 461 SNR--VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
EA F + K P VT+ T+ GL +L+ L +K+ E+
Sbjct: 519 VGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 143/304 (47%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +SL+ G+C RI A + +M+E G +P+ T+ L++G+ LH N+
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL----FLH-NKAS 205
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A + D+M RG +PD+ ++ V++ + L+L+ LN M+ I V
Sbjct: 206 E-----AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ LC +E A +L EM G+ P+ TYN + A +L M
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + PN+ T+N LI F ++ ++ + + D +Y +LI+G C +
Sbjct: 321 EKKIN-PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKKK-LDEESITFGSE 296
EA Q F M+ K LP T+ TL G + D + +R + ++ L ++T+ +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 297 FQNY 300
Q +
Sbjct: 440 IQGF 443
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 16/284 (5%)
Query: 17 INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR 76
I ++D A G+M++ P++V +N LL+ V + +FE I E +M+
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM------NKFELVISLGE----QMQ 110
Query: 77 VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
GI D+ ++SI ++ + R + L+L L M + G P + T +S++ C RI
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
DA L+ +MV G P T+ A+ A+ L QM + C P++ TY +
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTV 229
Query: 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
+ +D+ + N ++ + + ++ + +I LC+ + + A F EM KG+
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 257 LPQKVTFETLYRGLIQ----SDMLRTWRR-LKKKLDEESITFGS 295
P VT+ +L L SD R L+KK++ +TF +
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 136/297 (45%), Gaps = 16/297 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + L+ K+N+ ++ +M G+ ++ TY++ +N CRR+ L
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSL---- 136
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V +M G EPD+ + S +L+ Y + + ++ ++ M E G P T
Sbjct: 137 ------ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ L + +A L+ +MV+ G P TY R D + A+ L +M+
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ N+ +N +I +++ +++ ++ + ++ +Y LI+ LC +W
Sbjct: 251 AARI-KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITF 293
+A + M+EK + P VTF L + L +L ++ +D ++IT+
Sbjct: 310 SDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN++ Y +LI G+CK R++ EM +RG+ N VTY ++ G +
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD---- 450
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+A+ VF +M + D+ ++SI+LH K +L ++++ + +
Sbjct: 451 ------SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++++ +C G++ +A +L + + P TYN ++ A L+R+M
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Query: 181 KEDDLCVPNIHTYNILI 197
KED +PN TYN LI
Sbjct: 562 KEDG-TLPNSGTYNTLI 577
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G C + A+ +M E G PN TYN L+ RA+L +R
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI-----RANLRDCDR- 586
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK 111
+ ++ EMR G D ++ S+V ++ H +L LN +
Sbjct: 587 ----AASAELIKEMRSSGFVGDASTISLVTNML---HDGRLDKSFLNMLS 629
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 141/272 (51%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI+G N+ A + M++RG +PN+VTY V++NG+C+R
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD------- 240
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + ++M IE +V +S V+ + +L+ M+ KG+ P V T
Sbjct: 241 ---IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 297
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLC+ R DA LL +M+ ++P+ T+N + A KLY +M
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TY+ LI F +R+D + ++ + + ++ +Y LI+G C+ ++
Sbjct: 358 KRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
E + F EM ++GL+ VT+ TL G Q+
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 142/289 (49%), Gaps = 11/289 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI C R A R L +MIER + PNVVT+N L++ +
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK---------- 342
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK++DEM R I+PD+ ++S +++ + + + M K P V T
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C RI++ EL EM + G+ + TY + +D + A +++QM
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + PNI TYN L+ +++ ++ +++ S++ + +Y ++I G+C+ K
Sbjct: 463 SDGV-HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
++ F + KG+ P + + T+ G + + L +K+ E+
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 26/315 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVC--RRAS------ 54
N+ Y LI +C+ ++I +A LG+M++ G EP++VT + LLNG C +R S
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 55 -------LHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
P+ T+ A + D M RG +P++ ++ +V++ +
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
L+ + LN M+ I V Y++V+ LC +DA L EM GV P+ TY
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
+ + + A +L M E + PN+ T+N LI F+ ++ ++++ +
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKIN-PNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
+ D+ +Y+ LI+G C + EA F MI K P VT+ TL G ++ +
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 278 TWRRLKKKLDEESIT 292
L +++ + +
Sbjct: 418 EGVELFREMSQRGLV 432
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 138/306 (45%), Gaps = 18/306 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNE 59
+P++ + L+ K+ + D+ LGE ++R G+ N+ TYN+L+N CRR+
Sbjct: 82 LPSIFEFNKLLSAIAKMKKFDLVIS-LGEKMQRLGISHNLYTYNILINCFCRRSQ----- 135
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
I A + +M G EP + + S +L+ Y + ++ ++ M E G P
Sbjct: 136 -----ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+T+++ L + +A L+ MV+ G P+ TY R D + A L +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ + N+ Y+ +I D ++ ++ + ++ +Y+ LI LC +
Sbjct: 251 MEAAKI-EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE 309
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFG 294
+W +A + +MIE+ + P VTF L ++ L +L K+ +D + T+
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 295 SEFQNY 300
S +
Sbjct: 370 SLINGF 375
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N YT+LI+G+ + D A+ +M+ GV PN++TYN LL+G+C+ N + E
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK------NGKLE 487
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K A VF+ ++ +EP + +++I++ +A K + D + KG+ P V Y
Sbjct: 488 K----AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+++ C G E+A+ L +M +G P + T
Sbjct: 544 NTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 124/309 (40%), Gaps = 50/309 (16%)
Query: 37 PNVVTYNVLLNGVC--RRASLHPNERFEKTIRN---------AEKVFDEMRVRGIEPDVT 85
P + ++ L G+C RA + + + +RN A +F M P +
Sbjct: 27 PRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIF 86
Query: 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
F+ +L ++ K L + M+ GI + TY ++ C C +I A LLG+M
Sbjct: 87 EFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 146
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE-----DDL--------------- 185
++ G PS T + Y K + A+ L QM E D +
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 186 --------------CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231
C PN+ TY +++ +D+ + N ++ +++ ++ Y+ +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKL 286
I LC+ + +A F EM KG+ P +T+ +L L + RL ++K+
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 287 DEESITFGS 295
+ +TF +
Sbjct: 327 NPNVVTFNA 335
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 141/279 (50%), Gaps = 17/279 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V +++LI + K ++ A+ EMI RG+ P+ +TYN L++G C+ LH
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH---- 367
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++FD M +G EPD+ ++SI+++ Y +A + + + KG+ P
Sbjct: 368 ------EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++V C G++ A+EL EMV GV PS TY + N A++++ +M
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + + I YNI+I +++D ++ + + D+ +Y ++I GLC+K
Sbjct: 482 QKSRMTL-GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYR------GLIQS 273
EA F +M E G P T+ L R GLI S
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 141/291 (48%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V Y+SLI G C + D + L EMI R + P+VVT++ L++ +
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK---------- 327
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A+++++EM RGI PD +++ ++ + + + + + M KG P + T
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ ++ C R++D L E+ G+ P+ TYN + N A +L+++M
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P++ TY IL+ ++ EI+ ++ S + L + Y ++IHG+C K
Sbjct: 448 SRGV-PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A F + +KG+ P VT+ + GL + L L +K+ E+ T
Sbjct: 507 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 557
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 141/299 (47%), Gaps = 16/299 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +++L+ G+C R+ A + M+E P++VT + L+NG+C +
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR------- 190
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + D M G +PD ++ VL+ ++ L+LD M+E+ I +V
Sbjct: 191 ---VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+ V+ LC G +DA L EM G+ TY+ + K+ R+M
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++ +P++ T++ LI +F+ ++ +E++N + + D +Y LI G C++
Sbjct: 308 GRNI-IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK-LDEESITFGS 295
EA Q F M+ KG P VT+ L ++ D +R +R + K L +IT+ +
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 145/323 (44%), Gaps = 26/323 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-SLHPNER 60
P++ ++LI G C R+ A + M+E G +P+ VTY +LN +C+ S +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 61 FEK------------------------TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
F K + +A +F+EM ++GI+ DV ++S ++
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K L M + I P V T+++++ G++ +A+EL EM+ G++P T
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + A +++ M C P+I TY+ILI + R+D ++ +
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKG-CEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
L + +Y L+ G C+ K A + F EM+ +G+ P VT+ L GL + L
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Query: 277 RTWRRLKKKLDEESITFGSEFQN 299
+ +K+ + +T G N
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYN 494
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 119/252 (47%), Gaps = 15/252 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ Y+ LI +CK R+D R E+ +G+ PN +TYN L+ G C+ L+
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA---- 438
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+++F EM RG+ P V ++ I+L + +L+ M++ + +
Sbjct: 439 ------AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ +C+ +++DA L + GV P TYN + + A L+R+MK
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
ED C P+ TYNILI + + + E+ +K D + M+I L +++
Sbjct: 553 EDG-CTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLD 611
Query: 242 KEACQYFVEMIE 253
K F++M+
Sbjct: 612 KS----FLDMLS 619
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN Y +L+ G+C+ +++ A+ EM+ RGV P+VVTY +LL+G+C L+
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN---- 472
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++F++M+ + + ++I++H A K + + +KG+ P V
Sbjct: 473 ------KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ LC G + +A+ L +M +G +P TYN + + G +++L +M
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Query: 181 K 181
K
Sbjct: 587 K 587
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 136/308 (44%), Gaps = 22/308 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P + L + + D+ F M G+E ++ T +++N CR+
Sbjct: 67 LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRK-------- 118
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY---SRAHKPQLSLDKLNFMKEKGICP 117
K + A V G EPD +FS +++ + R + +D++ MK++ P
Sbjct: 119 --KKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR---P 173
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
+ T ++++ LC GR+ +A L+ MV G P TY ++ A+ L+
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
R+M+E ++ ++ Y+I+I D ++N ++ + D+ +Y+ LI GLC
Sbjct: 234 RKMEERNI-KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESIT 292
KW + + EMI + ++P VTF L ++ L + L + + ++IT
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 293 FGSEFQNY 300
+ S +
Sbjct: 353 YNSLIDGF 360
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 89/240 (37%), Gaps = 34/240 (14%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ +A +F+ M P F+ + +R + L L M+ GI + T T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE-- 182
++ C C ++ A +LG + G P T++ + + A+ L +M E
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 183 ------------DDLCV--------------------PNIHTYNILIGMFMALNRMDMVR 210
+ LC+ P+ TY ++ +
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+++ ++ + + Y+++I LC+ + +A F EM KG+ VT+ +L GL
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 141/272 (51%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+L++G + N+ A + M+ +G +P++VTY ++NG+C+R P+
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG--EPDL-- 223
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M IE DV +S V+ + +L+ M KGI P V T
Sbjct: 224 ------ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLC+ GR DA LL +M+ ++P+ T+N + A KL+ +M
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PNI TYN LI F +R+D ++I+ + + D+ +Y LI+G C+ +K
Sbjct: 338 QRSI-DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + F +M +GL+ VT+ TL G Q+
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 139/292 (47%), Gaps = 22/292 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+SLI C R A R L +M+ER + PNVVT+N L++ +
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK---------- 322
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK+FDEM R I+P++ +++ +++ + + + M K P V T
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C ++ D EL +M R G+ + TY + D + A +++QM
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + PNI TYN L+ +++ ++ +++ S++ D+ +Y ++ G+C+ K
Sbjct: 443 SDGVH-PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITF 293
++ F + KG+ P + + T+ G KK L EE+ T
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFC-----------KKGLKEEAYTL 542
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 139/273 (50%), Gaps = 21/273 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + SLI + K ++ AE+ EMI+R ++PN+VTYN L+NG C ++R
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM------HDRL 361
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++ A+++F M + PDV +++ +++ + +A K ++ M +G+ T
Sbjct: 362 DE----AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ ++A+ + +MV +GV P+ TYN AM ++ ++
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWN-----HVKGSELGLDLDSYTMLIHGLC 236
+ + P+I+TYNI M + + V + W+ +KG + D+ +Y +I G C
Sbjct: 478 KSKM-EPDIYTYNI---MSEGMCKAGKVEDGWDLFCSLSLKGVKP--DVIAYNTMISGFC 531
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+K +EA F++M E G LP T+ TL R
Sbjct: 532 KKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 135/304 (44%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++ L+ K+ + D+ F +M GV N+ TYN+++N +CRR+ L
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQL------ 116
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +M G P + + + +L+ + ++ ++ ++ M E G P T
Sbjct: 117 ----SFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVT 172
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T++V L + +A L+ MV G P TY R + + A+ L +M+
Sbjct: 173 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 232
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + ++ Y+ +I +D ++ + + D+ +Y+ LI LC +W
Sbjct: 233 KGKI-EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSE 296
+A + +M+E+ + P VTF +L + L +L ++ +D +T+ S
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 297 FQNY 300
+
Sbjct: 352 INGF 355
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 129/282 (45%), Gaps = 16/282 (5%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
++D A GEM++ P++V ++ LL+ + + ++F+ I EK M +
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM------KKFDLVISFGEK----MEIL 94
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
G+ ++ +++I+++ R + +L L M + G P++ T S++ C RI +A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ +MV G P T+ A+ A+ L +M C P++ TY +I
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVIN 213
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
D+ + N ++ ++ D+ Y+ +I LC+ + +A F EM KG+ P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 259 QKVTFETLYRGLIQ----SDMLRTWRR-LKKKLDEESITFGS 295
T+ +L L SD R L++K++ +TF S
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N YT+LI+G+ + + D A+ +M+ GV PN++TYN LL+G+C+ N + E
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK------NGKLE 467
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K A VF+ ++ +EPD+ +++I+ +A K + D + KG+ P V Y
Sbjct: 468 K----AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C G E+A L +M +G P + TYN + + D + +L ++M+
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +LI G+CK ++ +M RG+ N VTY L++G + +
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD---- 432
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
NA+ VF +M G+ P++ +++ +L + K + ++ ++++ + P +
Sbjct: 433 ------NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY + + +C G++ED +L + GV P YN + + A L+ +M
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Query: 181 KEDDLCVPNIHTYNILI 197
KED +P+ TYN LI
Sbjct: 547 KEDG-PLPDSGTYNTLI 562
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 12/280 (4%)
Query: 14 WCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFD 73
+CK ++D A FL M ++G+EPNVV YN ++ CR K + A +F
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRM----------KNMDLARSIFS 508
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133
EM +G+EP+ ++SI++ + + Q + D +N M Y +++ LC G
Sbjct: 509 EMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVG 568
Query: 134 RIEDAEELLGEMVRNG-VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
+ A+E+L +++ S S +YN + D + A++ YR+M E+ PN+ T
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS-PNVVT 627
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
+ LI F NRMD+ E+ + +K EL LDL +Y LI G C+K K A F E+
Sbjct: 628 FTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELP 687
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
E GL+P + +L G + L KK+ + I+
Sbjct: 688 ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS 727
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 142/317 (44%), Gaps = 27/317 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR--------- 52
PNV Y +++ C++ +D+A EM+E+G+EPN TY++L++G +
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 53 ------ASLHPNERFEKTIRNA-----------EKVFDEMRVRGIEPDVTSFSIVLHVYS 95
++ NE TI N E + + ++ + TS++ ++ +
Sbjct: 542 INQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFV 601
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ +++ M E G P V T+TS++ C R++ A E+ EM +
Sbjct: 602 KVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLP 661
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
Y + + D A L+ ++ E L +PN+ YN LI F L +MD +++
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGL-MPNVSVYNSLISGFRNLGKMDAAIDLYKK 720
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
+ + DL +YT +I GL + A + E+++ G++P ++ L GL +
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780
Query: 276 LRTWRRLKKKLDEESIT 292
++ +++ ++ +T
Sbjct: 781 FLKASKMLEEMKKKDVT 797
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 122/266 (45%), Gaps = 11/266 (4%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y S+I G+ K+ D A EM E G PNVVT+ L+NG C+ +
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL--------- 643
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++ EM+ ++ D+ ++ ++ + + + + + + + E G+ P V+ Y S++
Sbjct: 644 -ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ G+++ A +L +MV +G+S TY + N A LY ++ + +
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGI- 761
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
VP+ + +L+ + ++ +K ++ ++ Y+ +I G + EA +
Sbjct: 762 VPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFR 821
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQ 272
EM+EKG++ F L G ++
Sbjct: 822 LHDEMLEKGIVHDDTVFNLLVSGRVE 847
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 128/312 (41%), Gaps = 33/312 (10%)
Query: 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF---EKT 64
TSL+ G+CK N + A M E G+ P+ V ++V++ C+ + F K+
Sbjct: 349 TSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKS 408
Query: 65 IRNA-EKVFDEMRVRGI----EPDVT------SF-SIVLH---------VYSRAHKPQLS 103
+R A V ++G P+ SF S + H ++ + K +
Sbjct: 409 VRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAA 468
Query: 104 LDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163
L M++KGI P V Y +++ C ++ A + EM+ G+ P+ TY+
Sbjct: 469 TSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDG 528
Query: 164 YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE-IWNHVKGSELG 222
+ KD A + QM + + YN +I + + +E + N +K
Sbjct: 529 FFKNKDEQNAWDVINQMNASNFEANEV-IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYS 587
Query: 223 LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD-------M 275
+ SY +I G + A + + EM E G P VTF +L G +S+ M
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM 647
Query: 276 LRTWRRLKKKLD 287
+ ++ KLD
Sbjct: 648 THEMKSMELKLD 659
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 12/254 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V +++ + N ID A+ +M+ GV + VT +L+ RASL
Sbjct: 201 VPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLM-----RASLR---- 251
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-GICPTV 119
E+ A K+F + RG EPD FS+ + + ++LD L M+ K G+ +
Sbjct: 252 -ERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQ 310
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
TYTSV+ G +E+A ++ EMV G+ S Y + A+ L+ +
Sbjct: 311 ETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNR 370
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+E+ L P+ +++++ F M+ E + +K + +I G + +
Sbjct: 371 MEEEGLA-PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAE 429
Query: 240 KWKEACQYFVEMIE 253
+ A + F + E
Sbjct: 430 SPEAALEIFNDSFE 443
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MPNV +Y SLI G+ + ++D A +M+ G+ ++ TY +++G+ +
Sbjct: 692 MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLK--------- 742
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ I A ++ E+ GI PD ++++ S+ + + L MK+K + P V
Sbjct: 743 -DGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVL 801
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
Y++V+ G + +A L EM+ G+ +N
Sbjct: 802 LYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFN 839
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 22/284 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNVVTYNVLLNGVCRRASLHPNER 60
P+ +++ + CK + MA L EM + GV + TY ++ +
Sbjct: 272 PDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVK--------- 322
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E + A +V DEM GI V + + +++ Y + ++ +LD N M+E+G+ P
Sbjct: 323 -EGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKV 381
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
++ +V+ C +E A E M ++PS+ + + + A++++
Sbjct: 382 MFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDS 441
Query: 181 KEDDLCVPNIHTY--NILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLC 236
E + H + N + +F ++D + KG E + + ML H C
Sbjct: 442 FESWIA----HGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAH--C 495
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS-DMLRTW 279
+ A F EM+EKGL P T+ L G ++ D W
Sbjct: 496 RMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAW 539
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 110/252 (43%), Gaps = 11/252 (4%)
Query: 43 NVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQL 102
N+L+ V +L PN + ++++ G E +F+ +L+ Y R +
Sbjct: 135 NLLVMFVSNNPTLIPNVMVNNLVDSSKRF-------GFELTPRAFNYLLNAYIRNKRMDY 187
Query: 103 SLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162
++D M ++ + P V +V+ L I++A+E+ +MV GV+ T +
Sbjct: 188 AVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMR 247
Query: 163 EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222
+ A+K++R++ P+ +++ + + M ++ ++G +LG
Sbjct: 248 ASLRERKPEEAVKIFRRVMSRG-AEPDGLLFSLAVQAACKTPDLVMALDLLREMRG-KLG 305
Query: 223 LDL--DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR 280
+ ++YT +I ++ +EA + EM+ G+ + +L G + + L
Sbjct: 306 VPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKAL 365
Query: 281 RLKKKLDEESIT 292
L +++EE +
Sbjct: 366 DLFNRMEEEGLA 377
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNG 48
PNV +Y+++I G + ++ A R EM+E+G+ + +N+L++G
Sbjct: 798 PNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 145/290 (50%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + +LI+G N+ A + M+ RG +P++ TY ++NG+C+R
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD------- 235
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + +M IE DV ++ ++ +L+ M KGI P V T
Sbjct: 236 ---IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S+++CLC+ GR DA LL +M+ ++P+ T++ + A KLY +M
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TY+ LI F +R+D + ++ + + ++ +Y LI G C+ ++
Sbjct: 353 KRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
+E + F EM ++GL+ VT+ TL +GL Q+ +++ KK+ + +
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 145/288 (50%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI C R A R L +MIER + PNVVT++ L++ +
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK---------- 337
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK++DEM R I+PD+ ++S +++ + + + M K P V T
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+E+ EL EM + G+ + TYN + D + A K++++M
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + P+I TY+IL+ +++ ++ +++ S++ D+ +Y ++I G+C+ K
Sbjct: 458 SDGV-PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++ F + KG+ P + + T+ G + + L +++ E+
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 44/301 (14%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y LI +C+ +++ +A LG+M++ G EP++VT + LLNG C K I
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCH----------GKRIS 167
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + D+M V +P+ +F+ ++H +K ++ ++ M +G P + TY +VV
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL- 185
LC G I+ A LL +M + + Y K+ N A+ L+ +M +
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
Query: 186 -----------CV----------------------PNIHTYNILIGMFMALNRMDMVREI 212
C+ PN+ T++ LI F+ ++ ++
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 213 WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
++ + + D+ +Y+ LI+G C + EA F MI K P VT+ TL +G +
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 273 S 273
+
Sbjct: 408 A 408
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y +LI G + DMA++ +M+ GV P+++TY++LL+G+C+ L
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE------ 482
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A VF+ ++ +EPD+ +++I++ +A K + D + KG+ P V Y
Sbjct: 483 ----KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ C G E+A+ L EM +G P++ TYN + D + +L ++M+
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Query: 183 DDLCVPNIHTYNILIGMF 200
V + T +++I M
Sbjct: 599 CGF-VGDASTISMVINML 615
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 130/282 (46%), Gaps = 16/282 (5%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
++D A GEM++ P++V +N LL+ + + +F+ I E+ M+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKM------NKFDLVISLGER----MQNL 109
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
I D+ S++I+++ + R + L+L L M + G P + T +S++ C RI +A
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ +M P+ T+N A+ A+ L +M C P++ TY ++
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDLFTYGTVVN 228
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
+D+ + ++ ++ D+ YT +I LC + +A F EM KG+ P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 259 QKVTFETLYRGLIQ----SDMLRTWRRL-KKKLDEESITFGS 295
VT+ +L R L SD R + ++K++ +TF +
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +YT++I G+C+ + A+ EM E G PN TYN L+ RA L ++
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI-----RARLRDGDK- 586
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
+ ++ EMR G D ++ S+V+++
Sbjct: 587 ----AASAELIKEMRSCGFVGDASTISMVINM 614
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 141/272 (51%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI+G N+ A + M++RG +P++VTY ++NG+C+R
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL---- 236
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M IE +V +S V+ + +L+ M+ KG+ P V T
Sbjct: 237 ------ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLC+ GR DA LL +M+ ++P+ T++ + + A KLY +M
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PNI TY+ LI F L+R+ +++ + + ++ +Y LI+G C+ ++
Sbjct: 351 KRSI-DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV 409
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + F EM ++GL+ VT+ TL G Q+
Sbjct: 410 DKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Score = 124 bits (311), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 125/248 (50%), Gaps = 11/248 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI C R A R L +MIER + PN+VT++ L++ ++ L
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL------ 339
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AEK+++EM R I+P++ ++S +++ + + + L M K P V T
Sbjct: 340 ----VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 395
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C R++ EL EM + G+ + TY + +D + A +++QM
Sbjct: 396 YNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 455
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PNI TYNIL+ ++ ++ +++ S + D+ +Y ++I G+C+ KW
Sbjct: 456 SVGVH-PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Query: 242 KEACQYFV 249
K YFV
Sbjct: 515 KMGGIYFV 522
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ SL+ G+C NRI A + +M+E G +P+ VT+ L++G+ LH N+
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGL----FLH-NKAS 200
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A + D M RG +PD+ ++ V++ + L+L+ LN M+ I V
Sbjct: 201 E-----AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++V+ LC +DA L EM GV P+ TY+ + A +L M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + PN+ T++ LI F+ ++ +++ + + ++ +Y+ LI+G C +
Sbjct: 316 ERKIN-PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EA Q MI K LP VT+ TL G ++ + L +++ + +
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 135/304 (44%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++ L+ K+N+ D+ F +M G+ N+ TYN+L+N CR + L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLS----- 130
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + +M G EPD+ + + +L+ + ++ ++ ++ M E G P T
Sbjct: 131 -----LALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVT 185
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ L + +A L+ MV+ G P TY R D + A+ L +M+
Sbjct: 186 FTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKME 245
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ N+ Y+ +I D ++ ++ + ++ +Y+ LI LC +W
Sbjct: 246 AAKI-EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 304
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSE 296
+A + +MIE+ + P VTF L ++ L +L K+ +D T+ S
Sbjct: 305 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 364
Query: 297 FQNY 300
+
Sbjct: 365 INGF 368
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PNV Y +LI G+CK R+D EM +RG+ N VTY L++G +
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ--------- 440
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ NA+ VF +M G+ P++ +++I+L + K ++ +++ + P +
Sbjct: 441 -ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 499
Query: 121 TYTSVVKCLCSCGR 134
TY +++ +C G+
Sbjct: 500 TYNIMIEGMCKAGK 513
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 157/318 (49%), Gaps = 30/318 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN-ER 60
PNV +YT+LI G CK I+ A+ EM + G+ N TY VL+NG+ + E
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 61 FEKT------------------------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
+EK ++A +VFDEMR RG+ ++ +++ ++ R
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K + ++ MK GI P + TY +++ C G++ A L ++ G+SPS T
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN + + D +GA K+ ++M+E + P+ TY ILI F + M+ + I +
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGI-KPSKVTYTILIDTFARSDNME--KAIQLRL 432
Query: 217 KGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
ELGL D+ +Y++LIHG C K + EA + F M+EK P +V + T+ G +
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 275 MLRTWRRLKKKLDEESIT 292
+L K+++E+ +
Sbjct: 493 SSYRALKLLKEMEEKELA 510
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 11/286 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
+V + LI G C+ I+ + L E+ E G PNVV Y L++G C++
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE-------- 213
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I A+ +F EM G+ + +++++++ + + + M+E G+ P + TY
Sbjct: 214 --IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
V+ LC GR +DA ++ EM GVS + TYN N A K+ QMK
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
D + PN+ TYN LI F + ++ + +K L L +Y +L+ G C K
Sbjct: 332 DGIN-PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
A + EM E+G+ P KVT+ L +SD + +L+ ++E
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y ++ CK R A + EM ERGV N+VTYN L+ G+CR
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR---------- 315
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A KV D+M+ GI P++ +++ ++ + K +L +K +G+ P++ T
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +V C G A +++ EM G+ PS TY + + A++L M+
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L VP++HTY++LI F +M+ ++ + + Y +I G C++
Sbjct: 436 ELGL-VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSS 494
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A + EM EK L P ++ + L + + RL +K+ + I
Sbjct: 495 YRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 12/266 (4%)
Query: 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT 64
++Y +I + + ++++ + EM++ G P +N LL V +S + F
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSF--- 151
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
F+E + + + DV SF I++ A + + S D L + E G P V YT+
Sbjct: 152 -------FNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTT 203
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
++ C G IE A++L EM + G+ + TY ++Y +M+ED
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG 263
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
+ PN++TYN ++ R ++++ ++ + ++ +Y LI GLC + K EA
Sbjct: 264 V-FPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGL 270
+ +M G+ P +T+ TL G
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGF 348
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 60/213 (28%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRR-----ASLH 56
PN+ Y +LI G+C + ++ A ++ RG+ P++VTYN+L++G CR+ A+
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 57 PNERFEKTIR-----------------NAEKVFD---EMRVRGIEPDVTSFSIVLHVY-- 94
E E+ I+ N EK M G+ PDV ++S+++H +
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 95 -------SRAHKPQL--------------------------SLDKLNFMKEKGICPTVAT 121
SR K + +L L M+EK + P VA+
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA 154
Y +++ LC + ++AE L+ +M+ +G+ PS
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y+ LI+G+C +++ A R M+E+ EPN V YN ++ G C+ S +
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY---- 495
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+ EM + + P+V S+ ++ V + K + + + M + GI P+ +
Sbjct: 496 ------RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTS 549
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 139/272 (51%), Gaps = 15/272 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+LI G CK +D A L EM + G++PN+ TYN ++NG+C+ +
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN------- 506
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A K+ E G+ D +++ ++ Y ++ + + + L M KG+ PT+ T
Sbjct: 507 ---IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C G +ED E+LL M+ G++P+A T+N K+Y R + A +Y+ M
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+ TY L+ M ++ +KG + + +Y++LI G +++K+
Sbjct: 624 SRGVG-PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682
Query: 242 KEACQYFVEMIEKGLLPQKVTF----ETLYRG 269
EA + F +M +GL K F +T Y+G
Sbjct: 683 LEAREVFDQMRREGLAADKEIFDFFSDTKYKG 714
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT+LI G+CK I A +F EM R + P+V+TY +++G C+ +
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM----- 402
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A K+F EM +G+EPD +F+ +++ Y +A + + N M + G P V
Sbjct: 403 -----VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ LC G ++ A ELL EM + G+ P+ TYN + A+KL +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ L + TY L+ + MD +EI + G L + ++ +L++G C
Sbjct: 518 EAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYR 268
++ + M+ KG+ P TF +L +
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Score = 127 bits (320), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 138/304 (45%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +Y S+I C+I ++ AE EMI +G+ P+ V Y L++G C+R
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD------- 366
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
IR A K F EM R I PDV +++ ++ + + + + M KG+ P T
Sbjct: 367 ---IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T ++ C G ++DA + M++ G SP+ TY D + A +L +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L PNI TYN ++ ++ ++ + + L D +YT L+ C+ +
Sbjct: 484 KIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR-----LKKKLDEESITFGSE 296
+A + EM+ KGL P VTF L G ML + L K + + TF S
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 297 FQNY 300
+ Y
Sbjct: 603 VKQY 606
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 136/299 (45%), Gaps = 11/299 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T LI G+CK + A R MI+ G PNVVTY L++G+C+ L
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD----- 473
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ EM G++P++ +++ +++ ++ + ++ + + G+ T
Sbjct: 474 -----SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ C G ++ A+E+L EM+ G+ P+ T+N + KL M
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PN T+N L+ + N + I+ + +G D +Y L+ G C+ +
Sbjct: 589 AKGI-APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNY 300
KEA F EM KG T+ L +G ++ R + ++ E + E ++
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 119/254 (46%), Gaps = 11/254 (4%)
Query: 29 EMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88
E E GV NV +YN++++ VC+ I+ A + M ++G PDV S+S
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGR----------IKEAHHLLLLMELKGYTPDVISYS 285
Query: 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
V++ Y R + + MK KG+ P Y S++ LC ++ +AEE EM+R
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G+ P Y + R D A K + +M D+ P++ TY +I F + M
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI-TPDVLTYTAIISGFCQIGDMVE 404
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++++ + L D ++T LI+G C+ K+A + MI+ G P VT+ TL
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 269 GLIQSDMLRTWRRL 282
GL + L + L
Sbjct: 465 GLCKEGDLDSANEL 478
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 127/296 (42%), Gaps = 26/296 (8%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR----------- 51
NV Y +I+ C++ RI A L M +G P+V++Y+ ++NG CR
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 52 ----RASLHPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
R L PN +I AE+ F EM +GI PD ++ ++ + +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ + M + I P V TYT+++ C G + +A +L EM G+ P + T+
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
Y A +++ M + C PN+ TY LI +D E+ + +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
L ++ +Y +++GLC+ +EA + E GL VT+ TL +S
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR-AHKPQLSLDKLNFMKEKGICPTVATYT 123
+R A +VF++M G+ V S ++ L S+ +K ++ E G+C VA+Y
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183
V+ +C GRI++A LL M G +P +Y+ Y + + KL MK
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243
L PN + Y +IG+ LC K E
Sbjct: 311 GL-KPNSYIYGSIIGL-----------------------------------LCRICKLAE 334
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
A + F EMI +G+LP V + TL G + +R + ++ IT
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K Y +L+ G CK + A EM +G +V TY+VL+ G +R
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR--------- 679
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
K A +VFD+MR G+ D F + +P +D ++
Sbjct: 680 -KKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPID 725
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 141/272 (51%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+LI+G N+ A + +M++RG +P++VTY ++NG+C+R
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD------- 238
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
I A + +M IE DV ++ ++ + +L+ M KGI P V T
Sbjct: 239 ---IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLC+ GR DA LL +M+ ++P+ T++ + A KLY +M
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TY+ LI F +R+D + ++ + + ++ +Y+ LI G C+ ++
Sbjct: 356 KRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+E + F EM ++GL+ VT+ TL G Q+
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 143/288 (49%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y+SLI C R A R L +MIER + PNVVT++ L++ +
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK---------- 340
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK++DEM R I+PD+ ++S +++ + + + M K P V T
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y++++K C R+E+ EL EM + G+ + TY + +D + A +++QM
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ PNI TYNIL+ ++ ++ +++ S + D+ +Y ++I G+C+ K
Sbjct: 461 SVGV-HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++ + F + KG+ P + + T+ G + L KK+ E+
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 138/291 (47%), Gaps = 11/291 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ +SL+ G+C RI A + +M+E G +P+ T+ L++G+ LH N+
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF----LH-NKAS 205
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E A + D+M RG +PD+ ++ V++ + L+L L M++ I V
Sbjct: 206 E-----AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC ++DA L EM G+ P TY+ + A +L M
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E + PN+ T++ LI F+ ++ ++++ + + D+ +Y+ LI+G C +
Sbjct: 321 ERKIN-PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
EA F MI K P VT+ TL +G ++ + L +++ + +
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 137/304 (45%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + L+ K+N+ ++ +M G+ ++ TY++ +N CRR+ L
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSL---- 136
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V +M G EPD+ + S +L+ Y + + ++ ++ M E G P T
Sbjct: 137 ------ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ L + +A L+ +MV+ G P TY R D + A+ L ++M+
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + ++ YN +I MD ++ + + D+ +Y+ LI LC +W
Sbjct: 251 KGKI-EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSE 296
+A + +MIE+ + P VTF L ++ L +L K+ +D + T+ S
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 297 FQNY 300
+
Sbjct: 370 INGF 373
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 16/284 (5%)
Query: 17 INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR 76
I ++D A G+M++ P++V +N LL+ V + +FE I E +M+
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM------NKFELVISLGE----QMQ 110
Query: 77 VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136
GI D+ ++SI ++ + R + L+L L M + G P + T +S++ C RI
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196
DA L+ +MV G P T+ A+ A+ L QM + C P++ TY +
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTV 229
Query: 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
+ +D+ + ++ ++ D+ Y +I GLC+ + +A F EM KG+
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 257 LPQKVTFETLYRGLIQ----SDMLRTWRRL-KKKLDEESITFGS 295
P T+ +L L SD R + ++K++ +TF +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N YT+LI+G+ + D A+ +M+ GV PN++TYN+LL+G+C+ L
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL------- 484
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
A VF+ ++ +EPD+ +++I++ +A K + + + KG+ P V Y
Sbjct: 485 ---AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C G E+A+ LL +M +G P++ TYN + D + +L ++M+
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y ++I G+C+ + A+ L +M E G PN TYN L+ RA L +R
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI-----RARLRDGDR- 589
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
+ ++ EMR G D ++ +V ++ + LD L+
Sbjct: 590 ----EASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 632
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 146/289 (50%), Gaps = 11/289 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI C R A R L +MIER + PNVVT++ L++ +
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK---------- 338
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK++DEM R I+PD+ ++S +++ + + + M K P V T
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+++ EL EM + G+ + TY + ++ + A +++QM
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + +P+I TY+IL+ +++ ++ +++ S++ D+ +Y ++I G+C+ K
Sbjct: 459 SDGV-LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
++ F + KG+ P VT+ T+ G + + L +++ EE
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 147/309 (47%), Gaps = 50/309 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR--RASLHPNE 59
P++ SL+ G+C NRI A +G+M+E G +P+ T+N L++G+ R RAS
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS----- 203
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL--------------- 104
A + D M V+G +PD+ ++ IV++ + L+L
Sbjct: 204 -------EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 105 -----------------DKLNF---MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
D LN M KGI P V TY S+++CLC+ GR DA LL +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
M+ ++P+ T++ + A KLY +M + + P+I TY+ LI F +
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHD 375
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
R+D + ++ + + ++ +Y LI G C+ ++ E + F EM ++GL+ VT+
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 265 TLYRGLIQS 273
TL G Q+
Sbjct: 436 TLIHGFFQA 444
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 138/305 (45%), Gaps = 44/305 (14%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ Y+ LI +C+ +++ +A L +M++ G EP++VT N LLNG C H N
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFC-----HGNR--- 166
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
I +A + +M G +PD +F+ ++H R ++ ++ ++ M KG P + TY
Sbjct: 167 --ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
VV LC G I+ A LL +M + + P YN K+ N A+ L+ +M
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 183 DDL------------CV----------------------PNIHTYNILIGMFMALNRMDM 208
+ C+ PN+ T++ LI F+ ++
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 344
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++++ + + D+ +Y+ LI+G C + EA F MI K P VT+ TL +
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 269 GLIQS 273
G ++
Sbjct: 405 GFCKA 409
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 134/304 (44%), Gaps = 16/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ ++ L+ K+N+ D+ +M G+ N+ TY++L+N CRR+ L
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSL---- 134
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A V +M G EPD+ + + +L+ + ++ ++ + M E G P T
Sbjct: 135 ------ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFT 188
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ L R +A L+ MV G P TY R D + A+ L ++M+
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P + YN +I ++ ++ + + ++ +Y LI LC +W
Sbjct: 249 QGKI-EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGSE 296
+A + +MIE+ + P VTF L ++ L +L K+ +D + T+ S
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 297 FQNY 300
+
Sbjct: 368 INGF 371
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 142/304 (46%), Gaps = 23/304 (7%)
Query: 4 VKMYTSLIYGWCKIN-------RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH 56
V+ ++ + Y + KI+ ++D A G+M++ P++V ++ LL+ + +
Sbjct: 39 VRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKM---- 94
Query: 57 PNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116
+F+ I E +M+ GI ++ ++SI+++ + R + L+L L M + G
Sbjct: 95 --NKFDLVISLGE----QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYE 148
Query: 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
P + T S++ C RI DA L+G+MV G P + T+N A+ A+ L
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+M C P++ TY I++ +D+ + ++ ++ + Y +I LC
Sbjct: 209 VDRMVVKG-CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRL-KKKLDEESI 291
+ +A F EM KG+ P VT+ +L R L SD R + ++K++ +
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 292 TFGS 295
TF +
Sbjct: 328 TFSA 331
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N YT+LI+G+ + D A+ +M+ GV P+++TY++LL+G+C
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK-------- 481
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A VF+ ++ +EPD+ +++I++ +A K + D + KG+ P V TY
Sbjct: 482 --VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ C G E+A+ L EM G P + TYN + + D + +L R+M+
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ Y+ L+ G C +++ A + +EP++ TYN+++ G+C+
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK------ 516
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + +F + ++G++P+V +++ ++ + R + + MKE+G P
Sbjct: 517 ----VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEM 145
TY ++++ G + EL+ EM
Sbjct: 573 TYNTLIRAHLRDGDKAASAELIREM 597
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+++ G+C+ + A+ EM E G P+ TYN L+ R +
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 62 EKTIRNAEKVFD 73
+ +R+ V D
Sbjct: 594 IREMRSCRFVGD 605
>sp|Q9FX35|PP117_ARATH Pentatricopeptide repeat-containing protein At1g73400,
mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2
SV=2
Length = 568
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 130/264 (49%), Gaps = 15/264 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + L +GWC++ A + L EMIE G +P TY ++ C+
Sbjct: 266 PDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAG-------- 317
Query: 62 EKTIRNAEKVFDEMRVRGIE---PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ A +FD M +G P +F++++ ++ K + + + M G P
Sbjct: 318 --MVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPD 375
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V+TY V++ +C ++++A + L EM G P TYNCF + + + A+KLY
Sbjct: 376 VSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYG 435
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M E C P++ TYN+LI MF ++ D W + + D+++Y +I+GL +
Sbjct: 436 RMVESR-CAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDC 494
Query: 239 QKWKEACQYFVEMIEKGL-LPQKV 261
+ KEAC E++ KGL LP +V
Sbjct: 495 HRAKEACFLLEEVVNKGLKLPYRV 518
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 21/263 (7%)
Query: 31 IERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIV 90
I +P + +N+LL+ +C+ ++ E + MR R ++PD +F+++
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCG----------LVKEGEALLRRMRHR-VKPDANTFNVL 274
Query: 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150
+ R P+ ++ L M E G P TY + + C G +++A +L M+ G
Sbjct: 275 FFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGS 334
Query: 151 S---PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY-NILIGMFMALNRM 206
+ P+A+T+ A +L +M C+P++ TY +++ GM MA ++
Sbjct: 335 AVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTG-CLPDVSTYKDVIEGMCMA-EKV 392
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D + + + D+ +Y + LCE +K EA + + M+E P T+ L
Sbjct: 393 DEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNML 452
Query: 267 YRGLIQSD----MLRTWRRLKKK 285
+ D TW + K+
Sbjct: 453 ISMFFEMDDPDGAFNTWTEMDKR 475
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y +I G C ++D A +FL EM +G P++VTYN L +C
Sbjct: 373 LPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCE--------- 423
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A K++ M P V ++++++ ++ P + + M ++ V
Sbjct: 424 -NRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVE 482
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY +++ L C R ++A LL E+V G+ ++ F + K+ M
Sbjct: 483 TYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHM 542
Query: 181 KE 182
K+
Sbjct: 543 KK 544
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 134 bits (337), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 27/293 (9%)
Query: 2 PNVKMYTSLIYGWCK---INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN 58
P++K YT L+ GW + + R+D R EM + G EP+VV Y +++N C+
Sbjct: 230 PDIKSYTILLEGWGQELNLLRVDEVNR---EMKDEGFEPDVVAYGIIINAHCKA------ 280
Query: 59 ERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+++E+ IR F+EM R +P F +++ K +L+ K G
Sbjct: 281 KKYEEAIR----FFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLE 336
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
TY ++V C R+EDA + + EM GV P+A TY+ + + A ++Y+
Sbjct: 337 APTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQ 396
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M C P + TY I++ MF R+DM +IW+ +KG + + ++ LI LC +
Sbjct: 397 TMS----CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHE 452
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ-------SDMLRTWRRLKK 284
K EAC+YF EM++ G+ P F L + L+ +D++ RL+K
Sbjct: 453 NKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRK 505
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 10/228 (4%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF-MKEKGICPTVAT 121
+ + +A+KVFD+M+ + EPD+ S++I+L + + L +D++N MK++G P V
Sbjct: 211 RNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN-LLRVDEVNREMKDEGFEPDVVA 269
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C + E+A EM + PS + K N A++ + + K
Sbjct: 270 YGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSK 329
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ TYN L+G + RM+ + + ++ +G + +Y +++H L Q+
Sbjct: 330 SSGFPL-EAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRS 388
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML----RTWRRLKKK 285
KEA + + M P T+E + R + L + W +K K
Sbjct: 389 KEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGK 433
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 100/237 (42%), Gaps = 37/237 (15%)
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+ D+M+ + + T F+++ Y+RA K + ++ + M+E G + + ++ L
Sbjct: 150 LVDDMKAKKLLSKET-FALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLS 208
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY-------------RGRKD-------- 169
+ DA+++ +M + P ++Y + + R KD
Sbjct: 209 KSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVV 268
Query: 170 ANG--------------AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
A G A++ + +M++ + C P+ H + LI + +++ E +
Sbjct: 269 AYGIIINAHCKAKKYEEAIRFFNEMEQRN-CKPSPHIFCSLINGLGSEKKLNDALEFFER 327
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272
K S L+ +Y L+ C Q+ ++A + EM KG+ P T++ + LI+
Sbjct: 328 SKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIR 384
Score = 35.0 bits (79), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEP 37
+P + M++SLI C N++D A + EM++ G+ P
Sbjct: 436 LPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
>sp|Q6NKW7|PP164_ARATH Pentatricopeptide repeat-containing protein At2g19280
OS=Arabidopsis thaliana GN=At2g19280 PE=2 SV=2
Length = 693
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 139/270 (51%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ YT++I G+C + R D A ++ G +++ G P++ T +L+ G C R
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI-GACSRFG------ 457
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+I +AE VF M+ G++ DV +++ ++H Y + H+ + ++ M+ GI P VA
Sbjct: 458 ---SISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVA 514
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ + G I++A E++ E++R G PS + + R D A L+ M
Sbjct: 515 TYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM 574
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + P++ T + L+ + RM+ ++N + + L D+ Y LIHG C
Sbjct: 575 ADLRM-KPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGD 633
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
++AC+ M+++G+LP + T L GL
Sbjct: 634 IEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 25/194 (12%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL-HPNERF 61
+V Y +L++G+ K ++++ + EM G+ P+V TYN+L++ + R + NE
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 62 EKTIRNA--------EKVFDEMRVRG----------------IEPDVTSFSIVLHVYSRA 97
+ IR V RG ++PDV + S +LH Y +A
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ + ++ N + + G+ P V Y +++ CS G IE A EL+G MV+ G+ P+ T+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 158 NCFFKEYRGRKDAN 171
+ G++ N
Sbjct: 657 HALVLGLEGKRFVN 670
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 114/294 (38%), Gaps = 49/294 (16%)
Query: 11 IYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEK 70
I G+CK+ + + A + + R PN+ Y+ L+ +C + A
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDM----------LRAST 394
Query: 71 VFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC 130
+F E+ G+ PD ++ ++ Y + + + + G P++ T T ++
Sbjct: 395 IFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI 190
G I DAE + M G+ TYN Y N +L +M+ + P++
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS-PDV 513
Query: 191 HTYNILIGMFMALNRMDMVREI-----------------------------------WNH 215
TYNILI + +D EI W +
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFY 573
Query: 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+ + D+ + + L+HG C+ Q+ ++A F ++++ GL P V + TL G
Sbjct: 574 MADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 115/303 (37%), Gaps = 43/303 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
P+ + SL+ +++ +++A F+ M+ RG N ++ + C +
Sbjct: 233 FPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYC------SDGY 286
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC---- 116
F+K ++ M+ GI PD+ +F++ + +A + + L +K GI
Sbjct: 287 FDK----GWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSV 342
Query: 117 ----------------------------PTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148
P + Y+S + +CS G + A + E+
Sbjct: 343 SVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFEL 402
Query: 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208
G+ P Y Y + A + + + + P++ T ILIG +
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTSTILIGACSRFGSISD 461
Query: 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
++ ++K L LD+ +Y L+HG + + + + EM G+ P T+ L
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 269 GLI 271
++
Sbjct: 522 SMV 524
Score = 38.1 bits (87), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 104/278 (37%), Gaps = 42/278 (15%)
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E+ + A K+ ++ GI P +L R H +L+ + + M +G A
Sbjct: 214 ERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAV 273
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR---KDANGA---MK 175
+ ++ CS G + ELL M G+ P + F + K+A +K
Sbjct: 274 LSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 176 LYRQMKE--------DDLCV-----------------PNIHTYNILIGMFMALNRMDMVR 210
L+ ++ D C PNI Y+ + + M
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRAS 393
Query: 211 EIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268
I+ + ELGL D YT +I G C + +A QYF +++ G P +T T+
Sbjct: 394 TIFQEI--FELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTSTILI 450
Query: 269 GLIQ-----SDMLRTWRRLKKK-LDEESITFGSEFQNY 300
G SD +R +K + L + +T+ + Y
Sbjct: 451 GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 139/272 (51%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN + +LI+G N+ A + M+ +G +P++VTY V++NG+C+R
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL---- 239
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M +EP V ++ ++ + +L+ M+ KGI P V T
Sbjct: 240 ------AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ CLC+ GR DA LL +M+ ++P T++ + A KLY +M
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + P+I TY+ LI F +R+D ++++ + D+ +Y LI G C+ ++
Sbjct: 354 KRSI-DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+E + F EM ++GL+ VT+ L +GL Q+
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 142/288 (49%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI C R A R L +MIER + P+V T++ L++ +
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK---------- 338
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + AEK++DEM R I+P + ++S +++ + + + FM K P V T
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++K C R+E+ E+ EM + G+ + TYN + D + A +++++M
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D + PNI TYN L+ +++ ++ +++ S++ + +Y ++I G+C+ K
Sbjct: 459 SDGV-PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
++ F + KG+ P V + T+ G + L K++ E+
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 11/276 (3%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y+ LI +C+ +++ +A LG+M++ G EPN+VT + LLNG C K I
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH----------SKRIS 168
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A + D+M V G +P+ +F+ ++H +K ++ ++ M KG P + TY VV
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
LC G + A LL +M + + P YN K + A+ L+++M+ +
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI- 287
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
PN+ TY+ LI R + + + ++ D+ +++ LI ++ K EA +
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ EM+++ + P VT+ +L G D L +++
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 131/282 (46%), Gaps = 16/282 (5%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
++D A GEM++ P+++ ++ LL+ + + +F+ I E +M+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKM------NKFDVVISLGE----QMQNL 110
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI + ++SI+++ + R + L+L L M + G P + T +S++ C RI +A
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ +M G P+ T+N A+ AM L +M C P++ TY +++
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVN 229
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
D+ + N ++ +L + Y +I GLC+ + +A F EM KG+ P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 259 QKVTFETLYRGLIQ----SDMLRTWRRL-KKKLDEESITFGS 295
VT+ +L L SD R + ++K++ + TF +
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 10/180 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N Y LI G + DMA+ EM+ GV PN++TYN LL+G+C+ N + E
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK------NGKLE 483
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
K A VF+ ++ +EP + +++I++ +A K + D + KG+ P V Y
Sbjct: 484 K----AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+++ C G E+A+ L EM +G P++ YN + D + +L ++M+
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 3/241 (1%)
Query: 52 RASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK 111
R L N E + +A +F EM P + FS +L ++ +K + + M+
Sbjct: 49 REKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ 108
Query: 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171
GI TY+ ++ C C ++ A +LG+M++ G P+ T + Y K +
Sbjct: 109 NLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 168
Query: 172 GAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
A+ L QM PN T+N LI G+F+ N+ + + + DL +Y +
Sbjct: 169 EAVALVDQMFVTGY-QPNTVTFNTLIHGLFLH-NKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 231 LIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+++GLC++ A +M + L P + + T+ GL + + L K+++ +
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 291 I 291
I
Sbjct: 287 I 287
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y ++I G+C+ + A+ EM E G PN YN L+ RA L +R
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI-----RARLRDGDR- 587
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN 108
+ ++ EMR G D ++ +V ++ + LD L+
Sbjct: 588 ----EASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 630
>sp|Q9LUJ4|PP248_ARATH Pentatricopeptide repeat-containing protein At3g22670,
mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2
SV=1
Length = 562
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 136/276 (49%), Gaps = 12/276 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ + + LI+G+CK + D A + M P+VVTY + C+
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCK---------- 320
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E R ++ +EMR G P+V +++IV+H ++ + +L MKE G P
Sbjct: 321 EGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKF 380
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ L GR +DA E+ +M GV YN A++L ++M+
Sbjct: 381 YSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRME 440
Query: 182 --EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
E + C PN+ TY L+ M +M ++ + +H+ +++ +D+ +Y +LI GLC
Sbjct: 441 DEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSG 500
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275
K +EAC +F E + KG++P+ T + L L + +M
Sbjct: 501 KVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNM 536
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 34 GVEPNVVTYNVLLNGVCRRASL-HPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH 92
GV+ + + N L++ + + S+ H +E F K +FD I+PD +F+I++H
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLK-------LFD-----TIKPDARTFNILIH 281
Query: 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP 152
+ +A K + ++ MK P V TYTS V+ C G E+L EM NG +P
Sbjct: 282 GFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNP 341
Query: 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212
+ TY K A+ +Y +MKED CVP+ Y+ LI + R EI
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDG-CVPDAKFYSSLIHILSKTGRFKDAAEI 400
Query: 213 WNHVKGSELGLDLDSYTMLIHG 234
+ + + D+ Y +I
Sbjct: 401 FEDMTNQGVRRDVLVYNTMISA 422
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ K Y+SLI+ K R A +M +GV +V+ YN +++ A+LH + R
Sbjct: 375 VPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMIS-----AALH-HSR 428
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
E +R +++ DE P+V +++ +L + K +L L+ M + + V+
Sbjct: 429 DEMALRLLKRMEDE-EGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVS 487
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176
TY +++ LC G++E+A E VR G+ P T E + A +K+
Sbjct: 488 TYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKI 543
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 3/181 (1%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKL 176
T+ T + V++ L G+ A + EM ++ GV N A ++
Sbjct: 202 TLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEV 261
Query: 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236
+ +K D P+ T+NILI F + D R + + +K +E D+ +YT + C
Sbjct: 262 F--LKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYC 319
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSE 296
++ ++ + EM E G P VT+ + L +S + + +K+ E+ ++
Sbjct: 320 KEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAK 379
Query: 297 F 297
F
Sbjct: 380 F 380
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 151/302 (50%), Gaps = 22/302 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +++ C ++ A L M++R P+V+TY +L+ CR
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR---------- 251
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ + +A K+ DEMR RG PDV +++++++ + + ++ LN M G P V T
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANG-AMKLYRQM 180
+ +++ +CS GR DAE+LL +M+R G SPS T+N + RK G A+ + +M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN-FLCRKGLLGRAIDILEKM 370
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C PN +YN L+ F +MD E + D+ +Y ++ LC+ K
Sbjct: 371 PQHG-CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK-------KKLDEESITF 293
++A + ++ KG P +T+ T+ GL ++ +T + +K K L ++IT+
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG--KTGKAIKLLDEMRAKDLKPDTITY 487
Query: 294 GS 295
S
Sbjct: 488 SS 489
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 139/285 (48%), Gaps = 11/285 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV + ++ C R AE+ L +M+ +G P+VVT+N+L+N +CR+ L
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG----- 361
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M G +P+ S++ +LH + + K +++ L M +G P + T
Sbjct: 362 -----RAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ LC G++EDA E+L ++ G SP TYN A+KL +M+
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
DL P+ TY+ L+G ++D + ++ + + + ++ ++ GLC+ ++
Sbjct: 477 AKDL-KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
A + V MI +G P + ++ L GL M + L +L
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 121 bits (303), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 26/297 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL------ 55
P+V YT LI C+ + + A + L EM +RG P+VVTYNVL+NG+C+ L
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 56 ---------HPNERFEKTI----------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
PN I +AEK+ +M +G P V +F+I+++ R
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
++D L M + G P +Y ++ C +++ A E L MV G P T
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN A+++ Q+ C P + TYN +I + ++ + +
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKG-CSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ +L D +Y+ L+ GL + K EA ++F E G+ P VTF ++ GL +S
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKS 532
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 121/252 (48%), Gaps = 14/252 (5%)
Query: 25 RFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84
+FL M+ G P+++ L+ G C R KT R A K+ + + G PDV
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFC---------RLGKT-RKAAKILEILEGSGAVPDV 172
Query: 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144
++++++ Y +A + +L L+ M + P V TY ++++ LC G+++ A E+L
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 145 MVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204
M++ P TY + AMKL +M+ D C P++ TYN+L+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR-DRGCTPDVVTYNVLVNGICKEG 288
Query: 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264
R+D + N + S ++ ++ +++ +C +W +A + +M+ KG P VTF
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 265 TLYRGLIQSDML 276
L L + +L
Sbjct: 349 ILINFLCRKGLL 360
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 140/307 (45%), Gaps = 53/307 (17%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ T+LI G+C++ + A + L + G P+V+TYNV+++G C+
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE------ 187
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I NA V D M V PDV +++ +L + K + +++ L+ M ++ P V
Sbjct: 188 ----INNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYR 178
TYT +++ C + A +LL EM G +P TYN GR D A+K
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE--AIKFLN 298
Query: 179 QMKEDDLCVPNIHTYNILI------GMFMALNRM--DMVREIWNH------------VKG 218
M C PN+ T+NI++ G +M ++ DM+R+ ++ +
Sbjct: 299 DMPSSG-CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 219 SELGLDLD---------------SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
LG +D SY L+HG C+++K A +Y M+ +G P VT+
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 264 ETLYRGL 270
T+ L
Sbjct: 418 NTMLTAL 424
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 142/278 (51%), Gaps = 14/278 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ +TSL+YGWC+ ++ A+ L +M E G+EP++V + LL+G +
Sbjct: 234 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA----- 288
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT-VA 120
+A + ++MR RG EP+V +++++ R K ++ E+ C +
Sbjct: 289 -----DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIV 343
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT+++ C G I+ +L +M + GV PS TY + ++ ++L +M
Sbjct: 344 TYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM 403
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
K C P++ YN++I + L + +WN ++ + L +D++ ++I+G +
Sbjct: 404 KRRG-CHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGF 462
Query: 241 WKEACQYFVEMIEKGLL--PQKVTFETLYRGLIQSDML 276
EAC +F EM+ +G+ PQ T ++L L++ D L
Sbjct: 463 LIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKL 500
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 151/310 (48%), Gaps = 19/310 (6%)
Query: 2 PNVKMYTSLIYGWCKI-NRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
PNV YT LI C+ R+D A R EM G E ++VTY L++G C+
Sbjct: 304 PNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG------- 356
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I V D+MR +G+ P ++ ++ + + + + L+ + MK +G P +
Sbjct: 357 ---MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 413
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y V++ C G +++A L EM NG+SP +T+ + + A +++M
Sbjct: 414 IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 473
Query: 181 KEDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHV--KGSELGLDLDSYTMLIHGLCE 237
+ P T L+ + ++++M +++W+ + K S L++ ++T+ IH L
Sbjct: 474 VSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYA 533
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEF 297
K KEAC Y ++M+E L+PQ T+ L +GL + L R + ++ E+ + SE
Sbjct: 534 KGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGL---NKLYN-RTIAAEITEKVVKMASE- 588
Query: 298 QNYHFKPYRR 307
+ FK Y++
Sbjct: 589 REMSFKMYKK 598
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
MP+ Y ++ K + + + +M RG P+++ YNV++ C+
Sbjct: 374 MPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGE------ 427
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI--CPT 118
++ A ++++EM G+ P V +F I+++ ++ + + M +GI P
Sbjct: 428 ----VKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQ 483
Query: 119 VATYTSVVKCLCSCGRIEDAEEL 141
T S++ L ++E A+++
Sbjct: 484 YGTLKSLLNNLVRDDKLEMAKDV 506
>sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protein At1g77360,
mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2
SV=2
Length = 517
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 149/286 (52%), Gaps = 12/286 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ K Y+ L+ GW K + A EMI+ G P++VTY+++++ +C+
Sbjct: 235 PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGR------- 287
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + M +P +S+++H Y ++ + ++D M+ G+ VA
Sbjct: 288 ---VDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ S++ C R+++ +L EM GV+P++++ N + R + + A ++R+M
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI 404
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ +C P+ TY ++I MF M+ ++W +++ + + ++++LI+GLCE++
Sbjct: 405 K--VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTT 462
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
++AC EMIE G+ P VTF L + LI+ + + L +K++
Sbjct: 463 QKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMN 508
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 105/217 (48%), Gaps = 2/217 (0%)
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
+V +F IV+ Y+RA K ++ N M++ + P + + ++ LC + A+E+
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202
M R+ +P ++TY+ + + + A +++R+M D C P+I TY+I++ +
Sbjct: 227 ENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI-DAGCHPDIVTYSIMVDILCK 284
Query: 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262
R+D I + S Y++L+H + + +EA F+EM G+
Sbjct: 285 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
Query: 263 FETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
F +L +++ ++ R+ K++ + +T S+ N
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCN 381
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 146/277 (52%), Gaps = 11/277 (3%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
L+ +C+ +++ +A FLG+MI+ G EP++VT+ LLNG CR ++ +A
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY----------DAL 171
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+FD+M G +P+V ++ ++ ++ + +LD LN M++ GI P V TY S++ L
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
CS GR DA ++ M + + P T+N + A + Y +M L P+
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL-DPD 290
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
I TY++LI +R+D E++ + D+ +Y++LI+G C+ +K + + F
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 250 EMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
EM ++G++ VT+ L +G ++ L + +++
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 36/320 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y ++I G CK ++D A L M + G+ P+VVTYN L++G+C R
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLH---V 93
E + AE+ ++EM R ++PD+ ++S++++ +
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
YSR + + + FM KG P V TY+ ++ C ++E +L EM + GV +
Sbjct: 304 YSRLDEAE---EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV--PNIHTYNILIGMFMALNRMDMVRE 211
TY + Y N A +++R+M C PNI TYN+L+ +++
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMV---FCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
I ++ + + D+ +Y ++I G+C+ + +A + + +GL+P T+ T+ GL
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477
Query: 272 QSDMLRTWRRLKKKLDEESI 291
+ + R L +K+ E+ I
Sbjct: 478 KKGLRREADALFRKMKEDGI 497
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 134/260 (51%), Gaps = 13/260 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + +LI K R+ AE F EMI R ++P++VTY++L+ G+C + L
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD----- 308
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
AE++F M +G PDV ++SI+++ Y ++ K + + M ++G+ T
Sbjct: 309 -----EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ C G++ AEE+ MV GV P+ TYN A+ + M+
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 182 EDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
++ + +I TYNI+I GM A D +I+ + L D+ +YT ++ GL +K
Sbjct: 424 KNGM-DADIVTYNIIIRGMCKAGEVAD-AWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481
Query: 241 WKEACQYFVEMIEKGLLPQK 260
+EA F +M E G+LP +
Sbjct: 482 RREADALFRKMKEDGILPNE 501
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 138/305 (45%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ ++ L+ K+ + D+ +M G+ N+ T N+LLN CR + L
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F +M G EP + +F +L+ + R + +L + M G P V
Sbjct: 138 F----------LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV 187
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ LC ++++A +LL M ++G+ P TYN + A ++ M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ ++ P++ T+N LI + R+ E + + L D+ +Y++LI+GLC +
Sbjct: 248 TKREI-YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
EA + F M+ KG P VT+ L G +S + +L ++ + ++T+
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 296 EFQNY 300
Q Y
Sbjct: 367 LIQGY 371
>sp|Q9LFM6|PP375_ARATH Pentatricopeptide repeat-containing protein At5g11310,
mitochondrial OS=Arabidopsis thaliana GN=At5g11310 PE=2
SV=1
Length = 602
Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 144/284 (50%), Gaps = 15/284 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V+++ L+ GW + ++ AE+ EM V+P VVTY L+ G CR
Sbjct: 247 VPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRM-------- 298
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLN--FMKEKGICPT 118
+ ++ A +V +EM++ +E + F+ ++ A + +L + F+ E G PT
Sbjct: 299 --RRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESG--PT 354
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ TY S+VK C G + A ++L M+ GV P+ TYN FFK + M LY
Sbjct: 355 IVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYF 414
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
++ E P+ TY++++ M ++ + ++ +K + DL + TMLIH LC
Sbjct: 415 KLIEAGHS-PDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRL 473
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+ +EA + F + +G++PQ +TF+ + GL M +RL
Sbjct: 474 EMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 38.1 bits (87), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSR-AHKPQL--SLDKLNFMKEKGICPTVATYTSV 125
E DE GIEP V +V ++ R + P L S+ K MK G + + + SV
Sbjct: 89 ESALDET---GIEPSV---ELVHALFDRLSSSPMLLHSVFKWAEMK-PGFTLSPSLFDSV 141
Query: 126 VKCLCSCGRIEDAEELLGEMVRNGVSP---SAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
V LC E A L+ + VR+ SA+T+ + Y A++ + +
Sbjct: 142 VNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARS 201
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--------YTMLIHG 234
+ + +L + AL + VRE +++ +G +DS + +L++G
Sbjct: 202 YEPVCKSATELRLLEVLLDALCKEGHVREASMYLE--RIGGTMDSNWVPSVRIFNILLNG 259
Query: 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+K K+A + + EM + P VT+ TL G
Sbjct: 260 WFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEG 294
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 140/288 (48%), Gaps = 11/288 (3%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N+ Y LI G+C R D + L +MI+R + PNVVT++VL++ + E
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK----------E 346
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+R AE++ EM RGI PD +++ ++ + + + + ++ M KG P + T+
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
++ C RI+D EL +M GV TYN + + N A +L+++M
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
+ PNI TY IL+ + EI+ ++ S++ LD+ Y ++IHG+C K
Sbjct: 467 RKV-PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525
Query: 243 EACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290
+A F + KG+ P T+ + GL + L L +K++E+
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 133/269 (49%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ CK + +A L +M ER ++ + V Y+++++G+C+ SL
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD----- 280
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA +F+EM ++GI ++ +++I++ + A + L M ++ I P V T
Sbjct: 281 -----NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ ++ G++ +AEEL EM+ G++P TY + + A ++ M
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PNI T+NILI + NR+D E++ + + D +Y LI G CE K
Sbjct: 396 SKG-CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A + F EM+ + + P VT++ L GL
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 135/268 (50%), Gaps = 11/268 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV ++ LI + K ++ AE EMI RG+ P+ +TY L++G C+
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK---------- 380
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A ++ D M +G +P++ +F+I+++ Y +A++ L+ M +G+ T
Sbjct: 381 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++++ C G++ A+EL EMV V P+ TY ++ A++++ +++
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + +I YNI+I +++D +++ + + + +Y ++I GLC+K
Sbjct: 501 KSKMEL-DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRG 269
EA F +M E G P T+ L R
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRA 587
Score = 114 bits (285), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 151/306 (49%), Gaps = 20/306 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN +++LI G C R+ A + M+E G +P+++T N L+NG+C L E
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC----LSGKEA- 210
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + D+M G +P+ ++ VL+V ++ + L+++ L M+E+ I
Sbjct: 211 -----EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY--RGRKDANGAMKLYRQ 179
Y+ ++ LC G +++A L EM G++ + TYN + GR D +GA KL R
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD-DGA-KLLRD 323
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + + PN+ T+++LI F+ ++ E+ + + D +YT LI G C++
Sbjct: 324 MIKRKI-NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 382
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLK-KKLDEESITFG 294
+A Q M+ KG P TF L G ++ D L +R++ + + +++T+
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 295 SEFQNY 300
+ Q +
Sbjct: 443 TLIQGF 448
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 96/175 (54%), Gaps = 10/175 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y +LI G+C++ ++++A+ EM+ R V PN+VTY +LL+G+C N EK
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC------DNGESEK--- 491
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
A ++F+++ +E D+ ++I++H A K + D + KG+ P V TY ++
Sbjct: 492 -ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
LC G + +AE L +M +G +P TYN + + G DA ++KL ++K
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 136/306 (44%), Gaps = 18/306 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR-RASLHPNE 59
+P V ++ L K + D+ +M +G+ N+ T ++++N CR R
Sbjct: 85 LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFS 144
Query: 60 RFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV 119
K I+ G EP+ +FS +++ + +L+ ++ M E G P +
Sbjct: 145 AMGKIIK-----------LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL 193
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T ++V LC G+ +A L+ +MV G P+A TY AM+L R+
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+E ++ + + Y+I+I +D ++N ++ + ++ +Y +LI G C
Sbjct: 254 MEERNIKLDAVK-YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 312
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL-----DEESITFG 294
+W + + +MI++ + P VTF L ++ LR L K++ ++IT+
Sbjct: 313 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 372
Query: 295 SEFQNY 300
S +
Sbjct: 373 SLIDGF 378
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 133/277 (48%), Gaps = 10/277 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ +T+L++G + N+ A + M+ +G +P++VTY ++NG+C+R P+
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG--EPDL-- 233
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A + ++M IE DV ++ ++ + + D N M+ KGI P V T
Sbjct: 234 ------ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ CLC+ GR DA LL +M+ ++P +N + A KLY +M
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ C P++ YN LI F R++ E++ + L + +YT LIHG + +
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
A F +M+ G+ P +T+ L GL + + T
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 133/271 (49%), Gaps = 14/271 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+V +Y ++I G CK +D A +M +G++P+V TYN L++ +C
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW------ 301
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL--NFMKEKGICPTV 119
+A ++ +M + I PD+ F+ ++ + + K + +KL +K K P V
Sbjct: 302 ----SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK-LVEAEKLYDEMVKSKHCFPDV 356
Query: 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++K C R+E+ E+ EM + G+ + TY + +D + A +++Q
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M D + P+I TYNIL+ ++ ++ +++ ++ LD+ +YT +I LC+
Sbjct: 417 MVSDGVH-PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
K ++ F + KG+ P VT+ T+ G
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 506
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LI G+CK R++ EM +RG+ N VTY L++G +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ---------- 403
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ NA+ VF +M G+ PD+ +++I+L + +L +M+++ + + T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT++++ LC G++ED +L + GV P+ TY + + A L+ +MK
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 182 EDDLCVPNIHTYNILI 197
ED +PN TYN LI
Sbjct: 524 EDG-PLPNSGTYNTLI 538
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N YT+LI+G+ + D A+ +M+ GV P+++TYN+LL+G+C +
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN-------- 441
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ A VF+ M+ R ++ D+ +++ ++ +A K + D + KG+ P V TY
Sbjct: 442 --VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY 499
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ C G E+A+ L EM +G P++ TYN + D + +L ++M+
Sbjct: 500 TTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRS 559
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 11/273 (4%)
Query: 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78
++D A G+M++ P++V ++ LL+ + + +F+ I E +M+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKM------NKFDLVISLGE----QMQNL 104
Query: 79 GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138
GI ++ ++SI ++ + R + L+L L M + G P++ T S++ C RI +A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198
L+ +MV G P T+ A+ A+ L +M C P++ TY +I
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVIN 223
Query: 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258
D+ + N ++ ++ D+ Y +I GLC+ + +A F +M KG+ P
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 259 QKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
T+ L L RL + E++I
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 150/290 (51%), Gaps = 14/290 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN YTSLI CKI + A R EM++ GVE NVVTY L++G+C ER
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA------ER 452
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
++ AE++F +M G+ P++ S++ ++H + +A +L+ LN +K +GI P +
Sbjct: 453 ----MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y + + LCS +IE A+ ++ EM G+ ++ Y Y + + L +M
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS--YTMLIHGLCEK 238
KE D+ V + T+ +LI + + +N + ++ GL ++ +T +I GLC+
Sbjct: 569 KELDIEV-TVVTFCVLIDGLCKNKLVSKAVDYFNRIS-NDFGLQANAAIFTAMIDGLCKD 626
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288
+ + A F +M++KGL+P + + +L G + + L+ K+ E
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Score = 121 bits (303), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 132/272 (48%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P + L++ + K+ + D +RF +MI G P V TYN++++ +C+
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK---------- 274
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A +F+EM+ RG+ PD +++ ++ + + + ++ MK+ P V T
Sbjct: 275 EGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVIT 334
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C C G++ E EM NG+ P+ +Y+ + A+K Y M+
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
L VPN +TY LI + + + N + + ++ +YT LI GLC+ ++
Sbjct: 395 RVGL-VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
KEA + F +M G++P ++ L G +++
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 11/273 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ Y S+I G+ K+ R+D F EM + EP+V+TYN L+N C+ L
Sbjct: 294 VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 353
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F + EM+ G++P+V S+S ++ + + Q ++ M+ G+ P
Sbjct: 354 F----------YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYTS++ C G + DA L EM++ GV + TY + A +L+ +M
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ +PN+ +YN LI F+ MD E+ N +KG + DL Y I GLC +K
Sbjct: 464 DTAGV-IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 522
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ A EM E G+ + + TL +S
Sbjct: 523 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 7/205 (3%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE---KGICPTVAT 121
+ A + F +M+ + P S + +LH +++ K D F K+ G PTV T
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD---DVKRFFKDMIGAGARPTVFT 264
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ C+C G +E A L EM G+ P TYN + + + + +MK
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
D C P++ TYN LI F ++ + E + +KG+ L ++ SY+ L+ C++
Sbjct: 325 -DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 242 KEACQYFVEMIEKGLLPQKVTFETL 266
++A +++V+M GL+P + T+ +L
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSL 408
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 18/265 (6%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y +LI+G+ K +D A L E+ RG++P+++ Y + G+C
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS--------- 519
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
EK I A+ V +EM+ GI+ + ++ ++ Y ++ P L L+ MKE I TV
Sbjct: 520 LEK-IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 578
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
T+ ++ LC + A + + + G+ +A + A L+ Q
Sbjct: 579 TFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQ 638
Query: 180 MKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWNHVKGSELGLDLD--SYTMLIHGLC 236
M + L VP+ Y L+ G F N ++ + K +E+G+ LD +YT L+ GL
Sbjct: 639 MVQKGL-VPDRTAYTSLMDGNFKQGNVLEALAL---RDKMAEIGMKLDLLAYTSLVWGLS 694
Query: 237 EKQKWKEACQYFVEMIEKGLLPQKV 261
+ ++A + EMI +G+ P +V
Sbjct: 695 HCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 1/168 (0%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
MK + P + ++ G+ +D + +M+ G P+ TYN D
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229
A L+ +MK L VP+ TYN +I F + R+D + +K D+ +Y
Sbjct: 278 VEAARGLFEEMKFRGL-VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 336
Query: 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
LI+ C+ K +++ EM GL P V++ TL + M++
Sbjct: 337 ALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 64/177 (36%), Gaps = 51/177 (28%)
Query: 144 EMVRNGVSPSAETYNCFFKEY----RGRKDANGAMKLYRQMKED-----------DLCVP 188
M RNG S E+Y C R DAN +K K D ++CVP
Sbjct: 132 SMTRNGFKHSVESY-CIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVP 190
Query: 189 NIHTYNIL------IGM-----------------------------FMALNRMDMVREIW 213
++ L +GM F L + D V+ +
Sbjct: 191 GFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF 250
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ G+ + +Y ++I +C++ + A F EM +GL+P VT+ ++ G
Sbjct: 251 KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 128 bits (321), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 15/269 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +I G+C R A+R L +MIER + P+V+T+N L++ AS+ + F
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS-----ASVKEGKLF 383
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E AEK+ DEM R I PD +++ +++ + + ++ D M + P V T
Sbjct: 384 E-----AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR----FDDAKHMFDLMASPDVVT 434
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ +++ C R+++ +LL E+ R G+ + TYN + + N A L+++M
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+C P+ T NIL+ F +++ E++ ++ S++ LD +Y ++IHG+C+ K
Sbjct: 495 SHGVC-PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA F + G+ P T+ + G
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 145/334 (43%), Gaps = 63/334 (18%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLG---------------EMIERGVEPNVVTYNVLL 46
P+V + +L++G C +RI A G +M+E G+ P V+T+N L+
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233
Query: 47 NGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDK 106
NG+C E + A + ++M +G+ DV ++ +++ + + +L+
Sbjct: 234 NGLC----------LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 107 LNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRG 166
L+ M+E I P V Y++++ LC G DA+ L EM+ G++P+ TYNC +
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 167 RKDANGAMKLYRQMKEDDL---------------------------------CV-PNIHT 192
+ A +L R M E ++ C+ P+ T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
YN +I F NR D + +++ + D+ ++ +I C ++ E Q E+
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286
+GL+ T+ TL G + D L + L +++
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 136/327 (41%), Gaps = 45/327 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V + +LI G C R+ A + +M+ +G+ +VVTY ++NG+C+
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD------- 276
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
++A + +M I+PDV +S ++ + + + M EKGI P V T
Sbjct: 277 ---TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM- 180
Y ++ CS GR DA+ LL +M+ ++P T+N A KL +M
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 181 ----------------------KEDD-------LCVPNIHTYNILIGMFMALNRMDMVRE 211
+ DD + P++ T+N +I ++ R+D +
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
+ + L + +Y LIHG CE A F EMI G+ P +T L G
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 272 QSDMLRTWRRL-----KKKLDEESITF 293
+++ L L K+D +++ +
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAY 540
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 123/273 (45%), Gaps = 6/273 (2%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF- 61
N+ + LI +C +++ + G++ + G +P+VVT+N LL+G+C +
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 62 ----EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117
E A +FD+M G+ P V +F+ +++ + + +N M KG+
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V TY ++V +C G + A LL +M + P Y+ + A L+
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
+M E + PN+ TYN +I F + R + + + E+ D+ ++ LI +
Sbjct: 320 SEMLEKGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ K EA + EM+ + + P VT+ ++ G
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 13/229 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V + ++I +C+ R+D + L E+ RG+ N TYN L++G C +L+
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA---- 485
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+ +F EM G+ PD + +I+L+ + K + +L+ ++ I
Sbjct: 486 ------AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ +C ++++A +L + +GV P +TYN + G+ + A L+ +MK
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTM 230
D+ P+ TYN LI + +D E+ + ++ + G D++T+
Sbjct: 600 -DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN--GFSGDAFTI 645
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 119/284 (41%), Gaps = 26/284 (9%)
Query: 14 WCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFD 73
+ ++NR D+A +M R + N+ ++N+L+ C L + F
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKL----------SFSLSTFG 165
Query: 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK---------------GICPT 118
++ G +PDV +F+ +LH + +L +M E G+ P
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
V T+ +++ LC GR+ +A L+ +MV G+ TY D A+ L
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
+M+E + P++ Y+ +I + +++ + + ++ +Y +I G C
Sbjct: 286 KMEETHI-KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+W +A + +MIE+ + P +TF L ++ L +L
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 194 NILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253
N +IG+F+ +NR D+ ++ ++ + L++ S+ +LI C+ K + F ++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 254 KGLLPQKVTFETLYRGLIQSD 274
G P VTF TL GL D
Sbjct: 170 LGFQPDVVTFNTLLHGLCLED 190
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 127 bits (320), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 134/263 (50%), Gaps = 11/263 (4%)
Query: 10 LIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE 69
L+ +C+ ++ +A FLG+M++ G EP++VT+ L+NG C R E+ A
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL------GNRMEE----AM 162
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
+ ++M GI+PDV ++ ++ + +L + M+ GI P V YTS+V L
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 130 CSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189
C+ GR DA+ LL M + + P T+N + A +LY +M + PN
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI-APN 281
Query: 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFV 249
I TY LI F +D R+++ ++ D+ +YT LI+G C+ +K +A + F
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 250 EMIEKGLLPQKVTFETLYRGLIQ 272
EM +KGL +T+ TL +G Q
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQ 364
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 150/318 (47%), Gaps = 27/318 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P+V MYTSL+ G C R A+ L M +R ++P+V+T+N L++ +
Sbjct: 210 PDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL 269
Query: 52 -----RASLHPNER----------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R S+ PN E + A ++F M +G PDV +++ +++ + +
Sbjct: 270 YNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK 329
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
K ++ M +KG+ TYT++++ G+ A+E+ MV GV P+ T
Sbjct: 330 CKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRT 389
Query: 157 YNCFFKEYRGRKDANGAMKLYRQM--KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
YN A+ ++ M +E D PNI TYN+L+ +++ ++
Sbjct: 390 YNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFE 449
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
++ E+ + + +YT++I G+C+ K K A F + KG+ P VT+ T+ GL +
Sbjct: 450 DMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509
Query: 275 MLRTWRRLKKKLDEESIT 292
+ L +K+ E+ ++
Sbjct: 510 LKHEAHVLFRKMKEDGVS 527
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 136/317 (42%), Gaps = 49/317 (15%)
Query: 23 AERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82
A M+E P+++ + LLN + + ++F+ I + D +++ G+
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKM------KKFDVVI----NLCDHLQIMGVSH 105
Query: 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELL 142
D+ + +++++ + ++ +P L+ L M + G P + T+TS++ C R+E+A ++
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE--------------DDLC-- 186
+MV G+ P Y N A+ L+ QM+ + LC
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 187 ------------------VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY 228
P++ T+N LI F+ + E++N + + ++ +Y
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 229 TMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTWRRLKK 284
T LI+G C + EA Q F M KG P V + +L G + D ++ + + +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 285 K-LDEESITFGSEFQNY 300
K L +IT+ + Q +
Sbjct: 346 KGLTGNTITYTTLIQGF 362
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 127 bits (320), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 26/312 (8%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V Y +LIYG CK ++ AE +LG+M+ G+EP+ TYN L+ G C+ + ER
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 62 -------------------------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
E A +F+E +GI+P+V ++ ++ S
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ N M EKG+ P V T+ +V LC G + DA+ L+ M+ G P T
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
+N Y + A+++ M D+ P+++TYN L+ ++ + V E + +
Sbjct: 464 FNILIHGYSTQLKMENALEILDVML-DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+L ++ +L+ LC +K EA EM K + P VTF TL G ++ L
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Query: 277 RTWRRLKKKLDE 288
L +K++E
Sbjct: 583 DGAYTLFRKMEE 594
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 133/297 (44%), Gaps = 45/297 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y +LI G I A + EM E+G+ P V T+N+L+NG+C+
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC------- 441
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ +A+ + M +G PD+ +F+I++H YS K + +L+ L+ M + G+ P V T
Sbjct: 442 ---VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 122 YTSVVKCLCSCGRIEDAEE-----------------------------------LLGEMV 146
Y S++ LC + ED E LL EM
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
V+P A T+ + D +GA L+R+M+E + TYNI+I F +
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNV 618
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
M +++ + LG D +Y +++ G C+ ++ +EM+E G +P T
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTL 675
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 152/339 (44%), Gaps = 49/339 (14%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN+ Y I G C+ +D A R +G +IE+G +P+V+TYN L+ G+C+ N +
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK------NSK 301
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F++ AE +M G+EPD +++ ++ Y + QL+ + G P
Sbjct: 302 FQE----AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY S++ LC G A L E + G+ P+ YN K + A +L +M
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 181 KEDDL------------------CV----------------PNIHTYNILIGMFMALNRM 206
E L CV P+I T+NILI + +M
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ EI + + + + D+ +Y L++GLC+ K+++ + + M+EKG P TF L
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 267 YRGLIQ----SDMLRTWRRLK-KKLDEESITFGSEFQNY 300
L + + L +K K ++ +++TFG+ +
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 134/324 (41%), Gaps = 44/324 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y +++ D A + M +RG+ P+V ++ + + C+ + H
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHA---- 164
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ + M +G E +V ++ V+ + + + M G+ ++T
Sbjct: 165 ------ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLST 218
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK----LY 177
+ +++ LC G +++ E+LL ++++ GV P+ TYN F + R + +GA++ L
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 178 RQMKEDDLCV------------------------------PNIHTYNILIGMFMALNRMD 207
Q + D+ P+ +TYN LI + +
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
+ I + D +Y LI GLC + + A F E + KG+ P + + TL
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 268 RGLIQSDMLRTWRRLKKKLDEESI 291
+GL M+ +L ++ E+ +
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGL 422
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 108/259 (41%), Gaps = 48/259 (18%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHV------YSRAHKPQLSLDKLNFMKEKGICPT 118
++ A VF+ M EP V S++ ++ V + +AHK + M+++GI P
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR------MRDRGITPD 145
Query: 119 VATYTSVVKCLCSCGRIEDA-----------------------------------EELLG 143
V ++T +K C R A EL G
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 144 EMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL 203
+M+ +GVS T+N + + D KL ++ + + +PN+ TYN+ I
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV-LPNLFTYNLFIQGLCQR 264
Query: 204 NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF 263
+D + + D+ +Y LI+GLC+ K++EA Y +M+ +GL P T+
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 264 ETLYRGLIQSDMLRTWRRL 282
TL G + M++ R+
Sbjct: 325 NTLIAGYCKGGMVQLAERI 343
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 30/186 (16%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP---- 57
PN+ + L+ C+ ++D A L EM + V P+ VT+ L++G C+ L
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 58 ------------------------NERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHV 93
E+ T+ AEK+F EM R + PD ++ +++
Sbjct: 589 FRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTM--AEKLFQEMVDRCLGPDGYTYRLMVDG 646
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
+ + L L M E G P++ T V+ CLC R+ +A ++ MV+ G+ P
Sbjct: 647 FCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Query: 154 AETYNC 159
A C
Sbjct: 707 AVNTIC 712
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 1/197 (0%)
Query: 94 YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS 153
Y R K Q +++ M PTV +Y +++ L G + A ++ M G++P
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213
++ K + + A++L M C N+ Y ++G F N E++
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQG-CEMNVVAYCTVVGGFYEENFKAEGYELF 204
Query: 214 NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ S + L L ++ L+ LC+K KE + ++I++G+LP T+ +GL Q
Sbjct: 205 GKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQR 264
Query: 274 DMLRTWRRLKKKLDEES 290
L R+ L E+
Sbjct: 265 GELDGAVRMVGCLIEQG 281
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 100 PQLSLDKLNFM-KEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETY 157
P +L+ N M KE G T++TY SV++ L G+ E EE+L +M N G Y
Sbjct: 20 PMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVY 79
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
K Y + A+ ++ +M D C P + +YN ++ + + D +++ ++
Sbjct: 80 VGAMKNYGRKGKVQEAVNVFERMDFYD-CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274
+ D+ S+T+ + C+ + A + M +G V + T+ G + +
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 132/269 (49%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + SL++G+C +NRI A + M++ G EPNVV YN L++G+C+ L+
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNI---- 194
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++ +EM +G+ DV +++ +L + + + L M ++ I P V T
Sbjct: 195 ------ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+T+++ G +++A+EL EM+++ V P+ TYN A K + M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C PN+ TYN LI F +D +++ + D+ +Y LIHG C+ K
Sbjct: 309 SKG-CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ A F M+ + + P +T L GL
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGL 396
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 154/339 (45%), Gaps = 46/339 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +Y +LI G CK +++A L EM ++G+ +VVTYN LL G+C +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC----------Y 223
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ +M R I PDV +F+ ++ V+ + + + M + + P T
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR+ DA++ M G P+ TYN + + + MKL+++M
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIW---------------------------- 213
+ +I TYN LI + + ++ + +I+
Sbjct: 344 CEGF-NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 214 -------NHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ SE + + +Y ++IHGLC+ K ++A + F + +G+ P T+ +
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Query: 267 YRGLIQSDMLRTWRRLKKKLDEESITFGSEFQNYHFKPY 305
GL ++ R L +++ EE I ++ H + +
Sbjct: 463 ILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEH 501
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 139/303 (45%), Gaps = 17/303 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ +T L+ + R + F +M G+ ++ ++ +L++ CR + L
Sbjct: 68 LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRL----- 122
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A V +M G EP + +F +LH + ++ + + M + G P V
Sbjct: 123 -----SFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVV 177
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE--YRGRKDANGAMKLYR 178
Y +++ LC G + A ELL EM + G+ TYN Y GR + A ++ R
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR--WSDAARMLR 235
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
M + + P++ T+ LI +F+ +D +E++ + S + + +Y +I+GLC
Sbjct: 236 DMMKRSI-NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQ 298
+ +A + F M KG P VT+ TL G + M+ +L +++ E F ++
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG--FNADIF 352
Query: 299 NYH 301
Y+
Sbjct: 353 TYN 355
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 120/279 (43%), Gaps = 46/279 (16%)
Query: 13 GWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVF 72
G+ R + A EM+ P++V + LL A+L R+E I ++K
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTAT---ANL---RRYETVIYFSQK-- 96
Query: 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
M + GI D+ SF+I++H + R + +L L M + G P++ T+ S++ C
Sbjct: 97 --MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
RI DA L+ MV++G P N+
Sbjct: 155 NRIGDAFSLVILMVKSGYEP------------------------------------NVVV 178
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
YN LI +++ E+ N ++ LG D+ +Y L+ GLC +W +A + +M+
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 253 EKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++ + P VTF L ++ L + L K++ + S+
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 150/304 (49%), Gaps = 17/304 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V ++T+LI G+ K R+D A L EM ++ ++V YNV ++ +
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK------- 253
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A K F E+ G++PD +++ ++ V +A++ +++ +++ P
Sbjct: 254 ---VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ S G+ ++A LL G PS YNC R + A+K++ +MK
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+D PN+ TYNILI M ++D E+ + ++ + L ++ + +++ LC+ QK
Sbjct: 371 KD--AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML-RTWRRLKKKLDEE----SITFGSE 296
EAC F EM K P ++TF +L GL + + ++ +K LD + SI + S
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 297 FQNY 300
+N+
Sbjct: 489 IKNF 492
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 11/270 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ + Y+ LI+G K + M E+G + YN++++G C+
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK------ 602
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ A ++ +EM+ +G EP V ++ V+ ++ + + K K I V
Sbjct: 603 ----VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y+S++ GRI++A +L E+++ G++P+ T+N ++ N A+ ++ M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
KE C PN TY ILI + + + W ++ + SYT +I GL +
Sbjct: 719 KELK-CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
EA F G +P + + GL
Sbjct: 778 IAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 46/306 (15%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N +YTSLI + R + + +MI + P++ N ++ C + P +
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD--CMFKAGEPEK--- 535
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+F+E++ R PD S+SI++H +A + + MKE+G Y
Sbjct: 536 -----GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
V+ C CG++ A +LL EM G P+ TY + A L+ + K
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 183 DDLCVPNIHTYNILIGMFMALNRMD----MVREI-----------WNH-----VKGSELG 222
+ + N+ Y+ LI F + R+D ++ E+ WN VK E+
Sbjct: 651 KRIEL-NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 223 LDL---------------DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
L +Y +LI+GLC+ +K+ +A ++ EM ++G+ P +++ T+
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 769
Query: 268 RGLIQS 273
GL ++
Sbjct: 770 SGLAKA 775
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 129/300 (43%), Gaps = 17/300 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y ++ K+ ++D A + EM ++ PN+ TYN+L++ +CR L
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLD---- 394
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A ++ D M+ G+ P+V + +I++ ++ K + M K P
Sbjct: 395 ------TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ S++ L GR++DA ++ +M+ + ++ Y K + K+Y+ M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P++ N + + R ++ +K D SY++LIHGL +
Sbjct: 509 INQN-CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL-----KKKLDEESITFGS 295
E + F M E+G + + + G + + +L K + +T+GS
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 15/282 (5%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y SL+ + D ++ LGEM G P+V T ++ G C +A+ +R
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLG-CVKAN---------KLR 150
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
V MR P ++++ ++ +S + + L M+E G PTV +T+++
Sbjct: 151 EGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLI 210
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC 186
+ GR++ A LL EM + + YN + + A K + +++ + L
Sbjct: 211 RGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL- 269
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246
P+ TY +IG+ NR+D E++ H++ + +Y +I G K+ EA
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 247 YFVEMIEKGLLPQKVTFE---TLYRGLIQSD-MLRTWRRLKK 284
KG +P + + T R + + D L+ + +KK
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
NV +Y+SLI G+ K+ RID A L E++++G+ PN+ T+N LL+ + +
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK----------A 705
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ I A F M+ P+ ++ I+++ + K + M+++G+ P+ +Y
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
T+++ L G I +A L NG P + YN + A A L+ + +
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825
Query: 183 DDLCVPN 189
L + N
Sbjct: 826 RGLPIHN 832
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 76/196 (38%), Gaps = 38/196 (19%)
Query: 116 CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET------------------- 156
CP +Y S++ + C + +++LGEM G PS T
Sbjct: 97 CPE--SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYD 154
Query: 157 ----------------YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200
Y + ++ + L++QM+E P +H + LI F
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGY-EPTVHLFTTLIRGF 213
Query: 201 MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260
R+D + + +K S L D+ Y + I + K A ++F E+ GL P +
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 261 VTFETLYRGLIQSDML 276
VT+ ++ L +++ L
Sbjct: 274 VTYTSMIGVLCKANRL 289
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y LI G CK+ + + A F EM ++G++P+ ++Y +++G+ + +
Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN------- 777
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112
I A +FD + G PD ++ ++ S ++ ++D + +E
Sbjct: 778 ---IAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNR---AMDAFSLFEE 822
>sp|Q9LFQ4|PP383_ARATH Pentatricopeptide repeat-containing protein At5g15010,
mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2
SV=2
Length = 572
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 139/282 (49%), Gaps = 32/282 (11%)
Query: 3 NVKMYTSLIYGWCK-INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
+ K + ++ GWC I AER EM GV+ +VV+Y+ +++ + SL+
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLN----- 319
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMK----EKGICP 117
K+FD M+ IEPD ++ V+H ++A + N MK EKGI P
Sbjct: 320 -----KVLKLFDRMKKECIEPDRKVYNAVVHALAKA---SFVSEARNLMKTMEEEKGIEP 371
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
V TY S++K LC + E+A+++ EM+ G+ P+ TY+ F + R ++ +
Sbjct: 372 NVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKM 431
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
R+M C P + TY +LI D V +W+ +K +G DL SY ++IHGL
Sbjct: 432 RKMG----CEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFL 487
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW 279
K +EA Y+ EM +KG+ P + DM+++W
Sbjct: 488 NGKIEEAYGYYKEMKDKGMRPNENV----------EDMIQSW 519
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y SLI CK + + A++ EM+E+G+ P + TY+ F
Sbjct: 371 PNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHA----------------F 414
Query: 62 EKTIRNAEKVFD---EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118
+ +R E+VF+ +MR G EP V ++ +++ R L + MKEK + P
Sbjct: 415 MRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPD 474
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170
+++Y ++ L G+IE+A EM G+ P+ + + G++ A
Sbjct: 475 LSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYA 526
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 142/288 (49%), Gaps = 11/288 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
++ Y +LI G+C R D + L +MI+R + PNVVT++VL++ +
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK---------- 345
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E +R A+++ EM RGI P+ +++ ++ + + ++ + ++ ++ M KG P + T
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
+ ++ C RI+D EL EM GV + TYN + + A KL+++M
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ P+I +Y IL+ ++ EI+ ++ S++ LD+ Y ++IHG+C K
Sbjct: 466 SRRV-RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289
+A F + KG+ + + L + D L L +K+ EE
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 143/281 (50%), Gaps = 11/281 (3%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV ++ LI + K ++ A++ L EM++RG+ PN +TYN L++G C+
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK---------- 380
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + A ++ D M +G +PD+ +F+I+++ Y +A++ L+ M +G+ T
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++V+ C G++E A++L EMV V P +Y + A++++ +++
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + + +I Y I+I +++D +++ + + LD +Y ++I LC K
Sbjct: 501 KSKMEL-DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282
+A F +M E+G P ++T+ L R + D T L
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAEL 600
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 137/269 (50%), Gaps = 11/269 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN Y ++ CK + +A L +M ER ++ + V Y+++++G+C+ SL
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD----- 280
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
NA +F+EM ++G + D+ +++ ++ + A + L M ++ I P V T
Sbjct: 281 -----NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
++ ++ G++ +A++LL EM++ G++P+ TYN + A+++ M
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
C P+I T+NILI + NR+D E++ + + + +Y L+ G C+ K
Sbjct: 396 SKG-CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ A + F EM+ + + P V+++ L GL
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 145/316 (45%), Gaps = 46/316 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+ ++ +L+ G C R+ A + M+E G +P ++T N L+NG+C
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC----------L 205
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-------- 113
+ +A + D M G +P+ ++ VL+V ++ + L+++ L M+E+
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 114 ------GIC---------------------PTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
G+C + TY +++ C+ GR +D +LL +M+
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+ +SP+ T++ + A +L ++M + + PN TYN LI F NR+
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI-APNTITYNSLIDGFCKENRL 384
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ + + D+ ++ +LI+G C+ + + + F EM +G++ VT+ TL
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 267 YRGLIQSDMLRTWRRL 282
+G QS L ++L
Sbjct: 445 VQGFCQSGKLEVAKKL 460
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 11/234 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + LI G+CK NRID EM RGV N VTYN L+ G C+ L
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV---- 456
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A+K+F EM R + PD+ S+ I+L + + +L+ +++ + +
Sbjct: 457 ------AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y ++ +C+ +++DA +L + GV A YN E + + A L+R+M
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235
E+ P+ TYNILI + + E+ +K S D+ + M+I+ L
Sbjct: 571 EEGH-APDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 129/292 (44%), Gaps = 11/292 (3%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P V + L K + ++ +M +G+ ++ T ++++N CR
Sbjct: 85 LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRC-------- 136
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+ + A ++ G EPD F+ +L+ + +L+ ++ M E G PT+
Sbjct: 137 --RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI 194
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T ++V LC G++ DA L+ MV G P+ TY AM+L R+M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+E ++ + + Y+I+I +D ++N ++ D+ +Y LI G C +
Sbjct: 255 EERNIKLDAVK-YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
W + + +MI++ + P VTF L ++ LR +L K++ + I
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 61/131 (46%), Gaps = 25/131 (19%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLH------ 56
++ +Y +I+G C +++D A + +GV+ + YN++++ +CR+ SL
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 57 ---------PNE-RFEKTIR---------NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
P+E + IR A ++ +EM+ G DV++ +V+++ S
Sbjct: 567 RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626
Query: 98 HKPQLSLDKLN 108
+ LD L+
Sbjct: 627 ELDKSFLDMLS 637
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 145/291 (49%), Gaps = 12/291 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN+ Y ++ G+CK+ ++ A +++ +++E G++P+ TY L+ G C+R
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQR--------- 266
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
K + +A KVF+EM ++G + +++ ++H A + ++D MK+ PTV T
Sbjct: 267 -KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT ++K LC R +A L+ EM G+ P+ TY + A +L QM
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
E L +PN+ TYN LI + ++ ++ ++ +L + +Y LI G C K
Sbjct: 386 EKGL-MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNV 443
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292
+A +M+E+ +LP VT+ +L G +S + RL +++ +
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 140/315 (44%), Gaps = 25/315 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA-------- 53
PN+ YT LI C + + A LG+M+E+G+ PNV+TYN L+NG C+R
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 54 -------SLHPNERF---------EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
L PN R + + A V ++M R + PDV +++ ++ R+
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 98 HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY 157
+ L+ M ++G+ P TYTS++ LC R+E+A +L + + GV+P+ Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 158 NCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217
Y + A + +M + C+PN T+N LI A ++ + +
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKN-CLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 218 GSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277
L + + T+LIH L + + A F +M+ G P T+ T + + L
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 278 TWRRLKKKLDEESIT 292
+ K+ E ++
Sbjct: 655 DAEDMMAKMRENGVS 669
Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 136/284 (47%), Gaps = 30/284 (10%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV MYT+LI G+CK ++D A L +M+ + PN +T+N L++G+C L
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL------ 583
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ A + ++M G++P V++ +I++H + + + M G P T
Sbjct: 584 ----KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+ ++ C GR+ DAE+++ +M NGVSP TY+ K Y N A + ++M+
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 182 EDDLCVPNIHTYNILIGMFM---------------ALNRM---DMVREIWNHVKGSELGL 223
D C P+ HT+ LI + A++ M D V E+ + +
Sbjct: 700 -DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTP 758
Query: 224 DLDSYTMLIHGLCEKQKWKEACQYFVEMI-EKGLLPQKVTFETL 266
+ SY LI G+CE + A + F M +G+ P ++ F L
Sbjct: 759 NAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 34/201 (16%)
Query: 110 MKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169
M E +CP + TY +V C G +E+A + + ++V G+ P TY Y RKD
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 170 ANGAMKLYRQMK----------------------------------EDDLCVPNIHTYNI 195
+ A K++ +M +DD C P + TY +
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255
LI R + ++ + + ++ +YT+LI LC + K+++A + +M+EKG
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 256 LLPQKVTFETLYRGLIQSDML 276
L+P +T+ L G + M+
Sbjct: 389 LMPNVITYNALINGYCKRGMI 409
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178
+ Y +++ L G +++ +++ EM+ + V P+ TYN Y + A +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 179 QMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238
++ E L P+ TY LI + +D +++N + + +YT LIHGLC
Sbjct: 243 KIVEAGL-DPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
++ EA FV+M + P T+ L + L S+ L K+++E I
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/282 (18%), Positives = 113/282 (40%), Gaps = 55/282 (19%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNG------------V 49
P+ YT+ I +C+ R+ AE + +M E GV P++ TY+ L+ G V
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 50 CRRASLHPNERFEKTIRNAEKVFDEMRV---RGIEPDVTS------FSIVLHVYSRAHKP 100
+R E + T + K EM+ +G EP++ + F V+ + + +
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754
Query: 101 QL-----SLDKL------------------NFMKEKGICPTVATYTSVVKCLCSCGRIED 137
+ S +KL + + +GI P+ + +++ C C + +
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814
Query: 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM-----KEDDLCVPNIHT 192
A +++ +M+ G P E+ + + +++ + ED+L
Sbjct: 815 AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDEL------A 868
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234
+ I+I ++ E++N ++ + +Y++LI G
Sbjct: 869 WKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 145/300 (48%), Gaps = 16/300 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+V Y SLIYG+ K + +A L +M +G +PNV +Y +L++G C+
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK------ 439
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
I A V +EM G++P+ F+ ++ + + H+ +++ M KG P V
Sbjct: 440 ----IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
T+ S++ LC I+ A LL +M+ GV + TYN + R + A KL +M
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ I TYN LI +D R ++ + S +LI+GLC
Sbjct: 556 VFQGSPLDEI-TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK-LDEESITFGS 295
+EA ++ EM+ +G P VTF +L GL ++ D L +R+L+ + + +++TF +
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 152/308 (49%), Gaps = 23/308 (7%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNE- 59
+P+ + + +I G CK +RI+ A + + M+ RG P+ +TY L+NG+C+ + +
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 60 ---RFEKT-----------------IRNAEKVFDEMRVR-GIEPDVTSFSIVLHVYSRAH 98
R K + +A+ V +M GI PDV +++ +++ Y +
Sbjct: 344 LFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Query: 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158
L+L+ L+ M+ KG P V +YT +V C G+I++A +L EM +G+ P+ +N
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218
C + A++++R+M C P+++T+N LI ++ + + +
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKG-CKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
+ + +Y LI+ + + KEA + EM+ +G ++T+ +L +GL ++ +
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 279 WRRLKKKL 286
R L +K+
Sbjct: 583 ARSLFEKM 590
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 144/308 (46%), Gaps = 16/308 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN +Y +LI+ K NR++ A + L EM G P+ T+N ++ G+C +
Sbjct: 249 VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC---------K 299
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F++ I A K+ + M +RG PD ++ +++ + + + D + + P +
Sbjct: 300 FDR-INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIV 354
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
+ +++ + GR++DA+ +L +MV + G+ P TYN Y A+++
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M+ C PN+++Y IL+ F L ++D + N + L + + LI C++
Sbjct: 415 MRNKG-CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSEFQN 299
+ EA + F EM KG P TF +L GL + D ++ L + + E + + N
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 300 YHFKPYRR 307
+ R
Sbjct: 534 TLINAFLR 541
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 128/268 (47%), Gaps = 17/268 (6%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT L+ G+CK+ +ID A L EM G++PN V +N L++ C+
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK---------- 471
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E I A ++F EM +G +PDV +F+ ++ + + +L L M +G+ T
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ G I++A +L+ EMV G TYN K + + A L+ +M
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL---GLDLDSYTMLIHGLCEK 238
D NI + NILI L R MV E K L D+ ++ LI+GLC
Sbjct: 592 RDGHAPSNI-SCNILIN---GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ ++ F ++ +G+ P VTF TL
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIR 66
Y SLI G C+ +D A +M+ G P+ ++ N+L+NG+CR + F+K
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK--- 623
Query: 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVV 126
EM +RG PD+ +F+ +++ RA + + L ++ +GI P T+ +++
Sbjct: 624 -------EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163
LC G + DA LL E + +G P+ T++ +
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 24/239 (10%)
Query: 36 EPNVVTYNVLL----NGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
EP +YNV+L +G C + A VF +M R I P + +F +V+
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKV--------------AANVFYDMLSRKIPPTLFTFGVVM 224
Query: 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151
+ ++ +L L M + G P Y +++ L C R+ +A +LL EM G
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE 211
P AET+N N A K+ +M P+ TY L+ + R+D ++
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF-APDDITYGYLMNGLCKIGRVDAAKD 343
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK-GLLPQKVTFETLYRG 269
++ + E+ + + LIHG + +A +M+ G++P T+ +L G
Sbjct: 344 LFYRIPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 17/233 (7%)
Query: 74 EMR-VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132
EMR V EP S+++VL + + +++ + M + I PT+ T+ V+K C+
Sbjct: 171 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAV 230
Query: 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192
I+ A LL +M ++G P++ Y N A++L +M CVP+ T
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG-CVPDAET 289
Query: 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252
+N +I +R++ ++ N + D +Y L++GLC+ + A F +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 253 EKGLLPQKVTFETLYRGLIQ-----------SDMLRTWRRLKKKLDEESITFG 294
+ P+ V F TL G + SDM+ ++ + S+ +G
Sbjct: 350 K----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 87/235 (37%), Gaps = 42/235 (17%)
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-PTVATYTS 124
+ +++ +M+ GI + F ++ Y +A P + + M+ C PT +Y
Sbjct: 128 KTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNV 187
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
V++ L S + A + +M+ + P+ T+ K + + + A+ L R M +
Sbjct: 188 VLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHG 247
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244
CVPN Y LI H L + + EA
Sbjct: 248 -CVPNSVIYQTLI-----------------------------------HSLSKCNRVNEA 271
Query: 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTW-----RRLKKKLDEESITFG 294
Q EM G +P TF + GL + D + R L + + IT+G
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 14/108 (12%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ + SLI G C+ RI+ ++ G+ P+ VT+N L++ +C+ ++
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY----- 686
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF 109
+A + DE G P+ ++SI+L ++ PQ +LD+ F
Sbjct: 687 -----DACLLLDEGIEDGFVPNHRTWSILL----QSIIPQETLDRRRF 725
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/150 (16%), Positives = 62/150 (41%)
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y ++ L + G + + LL +M G+ + ++Y +L +M
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ C P +YN+++ + ++ N + ++ + ++ L ++ +++ C +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
A +M + G +P V ++TL L
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSL 262
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 151/325 (46%), Gaps = 49/325 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P+V +Y ++I G CKI ++ A M GV + VTYN L+ G+C
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS----- 226
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A ++ +M +R I P+V +F+ V+ V+ + K ++ M + + P V T
Sbjct: 227 -----DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC GR+++A+++L MV G P TYN + K + KL+R+M
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWN--------------------------- 214
+ L V + TYN +I + R D +EI++
Sbjct: 342 QRGL-VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKA 400
Query: 215 -----HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269
+++ SE+ LD+ +Y ++IHG+C+ ++A F + KGL P V++ T+ G
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Query: 270 LIQSDMLRTWRR---LKKKLDEESI 291
+ R W + L +K+ E+ +
Sbjct: 461 FCRK---RQWDKSDLLYRKMQEDGL 482
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 146/305 (47%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ ++ ++ K D+ M G+ ++ +YN+++N +CR + R
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS------R 119
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
F A V +M G EPDV + S +++ + + ++ ++D ++ M+E G P V
Sbjct: 120 FVI----ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
Y +++ C G + DA EL M R+GV A TYN + A +L R M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
D+ VPN+ T+ +I +F+ + +++ + + D+ +Y LI+GLC +
Sbjct: 236 VMRDI-VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE-----ESITFGS 295
EA Q M+ KG LP VT+ TL G +S + +L +++ + ++IT+ +
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 296 EFQNY 300
Q Y
Sbjct: 355 IIQGY 359
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 124 bits (311), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 132/258 (51%), Gaps = 11/258 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y+SLI G CK R+ AER L EM + + PNV+T++ L++ +R L
Sbjct: 226 PNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKL------ 279
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ V+ M I+P+V ++S +++ ++ ++ L+ M KG P V T
Sbjct: 280 ----SKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 335
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+++ R++D +LL +M + GV+ + + N K Y + A+ ++ M
Sbjct: 336 YSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMT 395
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ L +PNI +YNI++ A ++ + H++ + LD+ +YT++IHG+C+
Sbjct: 396 SNGL-IPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMV 454
Query: 242 KEACQYFVEMIEKGLLPQ 259
KEA F ++ K + P
Sbjct: 455 KEAYDLFYKLKFKRVEPD 472
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 136/272 (50%), Gaps = 11/272 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P++ L+ +C+ + A +LG+M++ G+EP++VT + L+NG C
Sbjct: 121 PDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFC----------L 170
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+I++A V +M GI+ DV +I++ + +L+ L MK++GI P V T
Sbjct: 171 SNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVT 230
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y+S++ LC GR+ DAE L EM ++P+ T++ Y R + +Y+ M
Sbjct: 231 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI 290
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ + PN+ TY+ LI NR+D ++ + + ++ +Y+ L +G + +
Sbjct: 291 QMSID-PNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRV 349
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
+ + +M ++G+ V+ TL +G Q+
Sbjct: 350 DDGIKLLDDMPQRGVAANTVSCNTLIKGYFQA 381
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
+LI G+ + +ID+A G M G+ PN+ +YN++L G L N EK +
Sbjct: 373 TLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAG------LFANGEVEKALSR- 425
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
F+ M+ + D+ +++I++H +A + + D +K K + P YT ++
Sbjct: 426 ---FEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAE 482
Query: 129 LCSCGRIEDAEEL 141
L G +A+ L
Sbjct: 483 LNRAGMRTEADAL 495
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 187 VPNIHTYNILIGMFMALNRMDMVREIWNHV---KGSELGLDLDSYTMLIHGLCEKQKWKE 243
+P+I +N ++ + D+V +W + +G E+ DL + +L++ C +
Sbjct: 82 LPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSS 141
Query: 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
A Y +M++ G+ P VT +L G S+ ++ + ++++ I
Sbjct: 142 ALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGI 189
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/97 (18%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+PN++ Y ++ G ++ A M + + +++TY ++++G+C+
Sbjct: 400 IPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKAC------- 452
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRA 97
++ A +F +++ + +EPD +++I++ +RA
Sbjct: 453 ---MVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRA 486
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 146/309 (47%), Gaps = 22/309 (7%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPN--- 58
PNV Y L+ CK N++D A++ L EM +G P+ V+Y +++ +C +
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 59 -ERFEKTI----------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ 101
ERFE + + A ++ EM +GI P+V S+S +++V + + +
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN-GVSPSAETYNCF 160
L+ L M ++G P + T +S+VK G DA +L +M+R G+ P+ YN
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
+ + + A+ ++ M+E C PNI TY LI F +D IWN + S
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIG-CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWR 280
++ YT ++ LC K+KEA M ++ P TF +GL + L
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 281 RLKKKLDEE 289
++ ++++++
Sbjct: 478 KVFRQMEQQ 486
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 136/295 (46%), Gaps = 34/295 (11%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRAS------- 54
PNV Y++LI C +I++A FL +M++RG PN+ T + L+ G R +
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Query: 55 ---------LHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
L PN T I A VF M G P++ ++ +++ ++
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ ++ N M G CP V YT++V+ LC + ++AE L+ M + +PS
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD----MVRE 211
T+N F K + A K++RQM++ C PNI TYN L+ NR++ + RE
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Query: 212 IWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
I+ ++G E +Y L+HG C A Q +M+ G P ++T +
Sbjct: 519 IF--MRGVE--WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 119/280 (42%), Gaps = 14/280 (5%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PN++ Y SLI G+ K +D A +M+ G PNVV Y ++ +CR +
Sbjct: 385 PNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF------ 438
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP-TVA 120
+ AE + + M P V +F+ + A + + M+++ CP +
Sbjct: 439 ----KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIV 494
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TY ++ L RIE+A L E+ GV S+ TYN A++L +M
Sbjct: 495 TYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKM 554
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS--ELGLDLDSYTMLIHGLCEK 238
D P+ T N++I + + + ++ + V + D+ SYT +I GLC
Sbjct: 555 MVDGKS-PDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRS 613
Query: 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278
++ MI G++P T+ L I D++R
Sbjct: 614 NCREDGVILLERMISAGIVPSIATWSVLINCFILDDIVRA 653
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 127/303 (41%), Gaps = 44/303 (14%)
Query: 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI 65
++ S+I + ++ + A + E G +P+V YN +L+ + E I
Sbjct: 113 LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLG----------ENRI 162
Query: 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV 125
+ V+ +M+ G EP+V +++++L + +K + L M KG CP +YT+V
Sbjct: 163 QMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTV 222
Query: 126 VKCLCSCGRIED------------------------------AEELLGEMVRNGVSPSAE 155
+ +C G +++ A EL+ EMV G+SP+
Sbjct: 223 ISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWN 214
+Y+ A QM + C PNI+T + L+ G F+ D + ++WN
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRG-CHPNIYTLSSLVKGCFLRGTTFDAL-DLWN 340
Query: 215 H-VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++G L ++ +Y L+ G C +A F M E G P T+ +L G +
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR 400
Query: 274 DML 276
L
Sbjct: 401 GSL 403
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS 124
+ + + + +M+++G F V+ VY + + +++ +KE G P+V Y
Sbjct: 92 VDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNH 151
Query: 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDD 184
V+ L RI+ + +M R+G P+ TYN K +GA KL +M
Sbjct: 152 VLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG 211
Query: 185 LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS----YTMLIHGLCEKQK 240
C P+ +Y +I ++ + +V+E G EL + Y LI+GLC++
Sbjct: 212 -CCPDAVSYTTVIS---SMCEVGLVKE------GRELAERFEPVVSVYNALINGLCKEHD 261
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDML 276
+K A + EM+EKG+ P +++ TL L S +
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLY 177
T T+ +++ L G+++ + LL +M G S + + YR A A++++
Sbjct: 75 TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMF 134
Query: 178 RQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE 237
++KE C P++ YN ++ + NR+ M+ ++ +K ++ +Y +L+ LC+
Sbjct: 135 YRIKEFG-CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK 193
Query: 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287
K A + VEM KG P V++ T+ + + +++ R L ++ +
Sbjct: 194 NNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE 243
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 132/271 (48%), Gaps = 12/271 (4%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+ NV + +++ CK + D A L +M RG+ PNVV+YN ++ G CR
Sbjct: 440 LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCR--------- 490
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
+K + A VF + +G++P+ ++SI++ R H Q +L+ +N M I
Sbjct: 491 -QKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNG-VSPSAETYNCFFKEYRGRKDANGAMKLYRQ 179
Y +++ LC G+ A ELL M+ + S +YN + + + A+ Y +
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 180 MKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239
M + + PN+ TY L+ NRMD E+ + +K + LD+ +Y LI G C++
Sbjct: 610 MCGNGIS-PNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS 668
Query: 240 KWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270
+ A F E++E+GL P + + +L G
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGF 699
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 145/298 (48%), Gaps = 15/298 (5%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIE-RGVEPNVVTYNVLLNGVCRRASLHPNERF 61
N +Y ++I G CK+ + A L MIE + + + ++YN +++G +
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK---------- 596
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
E + +A ++EM GI P+V +++ +++ + ++ +L+ + MK KG+ +
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y +++ C +E A L E++ G++PS YN +R + A+ LY++M
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 182 EDDL-CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+D L C ++ TY LI + + + E++ ++ L D YT++++GL +K +
Sbjct: 717 KDGLRC--DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK-LDEESITFGSEF 297
+ + + F EM + + P + + + G + L RL + LD+ + G+ F
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 130/305 (42%), Gaps = 47/305 (15%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV Y +++ G C+ +D+A ++E+G++PN TY++L++G R H +
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRN---HDEQ-- 530
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKL-NFMKEK------- 113
NA +V + M IE + + +++ + + + + L N ++EK
Sbjct: 531 -----NALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCM 585
Query: 114 ----------------------------GICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145
GI P V TYTS++ LC R++ A E+ EM
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 146 VRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205
GV Y + R + A L+ ++ E+ L P+ YN LI F L
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN-PSQPIYNSLISGFRNLGN 704
Query: 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265
M +++ + L DL +YT LI GL + A + + EM GL+P ++ +
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 266 LYRGL 270
+ GL
Sbjct: 765 IVNGL 769
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 46/270 (17%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YTSL+ G CK NR+D A EM +GV+ ++ Y L++G C+R+++
Sbjct: 617 PNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNME----- 671
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A +F E+ G+ P ++ ++ + +LD M + G+ + T
Sbjct: 672 -----SASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT 726
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT+++ L G + A EL EM G+ P Y + +K++ +MK
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMK 786
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
++++ PN+ YN +I G +
Sbjct: 787 KNNV-TPNVLIYNAVIA-----------------------------------GHYREGNL 810
Query: 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLI 271
EA + EM++KG+LP TF+ L G +
Sbjct: 811 DEAFRLHDEMLDKGILPDGATFDILVSGQV 840
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 29/280 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL----- 55
+P+ + YTS+I K +D A R EM+ G+ NVV L+ G C+ L
Sbjct: 301 VPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALV 360
Query: 56 ----------HPN--------ERFEKT--IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
PN E F K + A + + +M V G+ P V ++ +
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ K + +L + E G+ V +++ LC G+ ++A ELL +M G+ P+
Sbjct: 421 KGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI-GMFMALNRMDMVREIWN 214
+YN + +K+ + A ++ + E L PN +TY+ILI G F + + + E+ N
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGL-KPNNYTYSILIDGCFRNHDEQNAL-EVVN 537
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254
H+ S + ++ Y +I+GLC+ + +A + MIE+
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 118/290 (40%), Gaps = 47/290 (16%)
Query: 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFE 62
N + + L+ + K + D A + +M+E V P N L+ + +R SL
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSL------- 214
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNF------------- 109
A++++ M G++ D + +++ R KP +L+ L+
Sbjct: 215 ---TEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLY 271
Query: 110 ----------------------MKEKGIC-PTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
MKEK +C P+ TYTSV+ G ++DA L EM+
Sbjct: 272 SLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEML 331
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+G+S + + D A+ L+ +M+++ PN T+++LI F M
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS-PNSVTFSVLIEWFRKNGEM 390
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL 256
+ E + ++ L + +I G + QK +EA + F E E GL
Sbjct: 391 EKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL 440
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 89/232 (38%), Gaps = 35/232 (15%)
Query: 70 KVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL 129
K+ D + G E + +F+ +L+ YS+ + ++D +N M E + P + L
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 130 CSCGRIEDAEELLGEMVRNGVS-----------------------------------PSA 154
+ +A+EL MV GV P +
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWN 214
Y+ + D A L R+MKE LCVP+ TY +I + MD + +
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328
Query: 215 HVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ + +++ + T LI G C+ A F +M ++G P VTF L
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVL 380
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P+ +YT ++ G K + + EM + V PNV+ YN ++ G R +L +E
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNL--DEA 813
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91
F ++ DEM +GI PD +F I++
Sbjct: 814 F--------RLHDEMLDKGILPDGATFDILV 836
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 139/283 (49%), Gaps = 11/283 (3%)
Query: 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNA 68
+LI +I +++A E+ GV NV T N+++N +C+ + F
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTF------- 257
Query: 69 EKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKC 128
+++ +G+ PD+ +++ ++ YS + + + +N M KG P V TY +V+
Sbjct: 258 ---LSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVING 314
Query: 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP 188
LC G+ E A+E+ EM+R+G+SP + TY E + D K++ M+ D+ VP
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV-VP 373
Query: 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248
++ ++ ++ +F +D +N VK + L D YT+LI G C K A
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291
EM+++G VT+ T+ GL + ML +L ++ E ++
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 137/307 (44%), Gaps = 46/307 (14%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
P V Y ++I G CK + + A+ EM+ G+ P+ TY LL C++
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD------- 355
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+ EKVF +MR R + PD+ FS ++ +++R+ +L N +KE G+ P
Sbjct: 356 ---VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK------------- 168
YT +++ C G I A L EM++ G + TYN RK
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 169 ----------------------DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
+ AM+L+++MKE + + ++ TYN L+ F + +
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL-DVVTYNTLLDGFGKVGDI 531
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
D +EIW + E+ SY++L++ LC K EA + + EMI K + P + ++
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 267 YRGLIQS 273
+G +S
Sbjct: 592 IKGYCRS 598
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 139/313 (44%), Gaps = 30/313 (9%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR---------- 51
P++ Y +LI + ++ A + M +G P V TYN ++NG+C+
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 52 -----RASLHPNERFEKT----------IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96
R+ L P+ ++ + EKVF +MR R + PD+ FS ++ +++R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156
+ +L N +KE G+ P YT +++ C G I A L EM++ G + T
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216
YN RK A KL+ +M E L P+ +T ILI L + E++ +
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERAL-FPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ---- 272
K + LD+ +Y L+ G + A + + +M+ K +LP +++ L L
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 273 SDMLRTWRRLKKK 285
++ R W + K
Sbjct: 567 AEAFRVWDEMISK 579
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 151/324 (46%), Gaps = 28/324 (8%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHP--- 57
+P+ +YT LI G+C+ I +A EM+++G +VVTYN +L+G+C+R L
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 58 --NERFEKTI--------------------RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95
NE E+ + +NA ++F +M+ + I DV +++ +L +
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE 155
+ + + M K I PT +Y+ +V LCS G + +A + EM+ + P+
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215
N K Y +A+ +M + VP+ +YN LI F+ M +
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGF-VPDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 216 VKGSELGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273
++ + GL D+ +Y ++HG C + + KEA +MIE+G+ P + T+ + G +
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
Query: 274 DMLRTWRRLKKKLDEESITFGSEF 297
D L R+ ++ + + +F
Sbjct: 706 DNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146
F +++ Y +A K + + + ++ KG ++ +++ L G +E A + E+
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206
R+GV + T N Q++E + P+I TYN LI + + M
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGV-YPDIVTYNTLISAYSSKGLM 286
Query: 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+ E+ N + G + +Y +I+GLC+ K++ A + F EM+ GL P T+ +L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 1/204 (0%)
Query: 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATY 122
+ +R A + F +R +G + + + ++ R +L+ + G+ V T
Sbjct: 179 RKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTL 238
Query: 123 TSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182
+V LC G++E L ++ GV P TYN Y + A +L M
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242
P ++TYN +I + + +E++ + S L D +Y L+ C+K
Sbjct: 299 KGFS-PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV 357
Query: 243 EACQYFVEMIEKGLLPQKVTFETL 266
E + F +M + ++P V F ++
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSM 381
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 77/166 (46%), Gaps = 18/166 (10%)
Query: 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVR-NGVS----------------PSAETYNCF 160
T + ++++ L GR+ DA+ L M+R +GVS + ++
Sbjct: 112 TSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLL 171
Query: 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220
+ Y + A + + ++ V +I N LIG + + +++ ++ + S
Sbjct: 172 IRTYVQARKLREAHEAFTLLRSKGFTV-SIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266
+G+++ + ++++ LC+ K ++ + ++ EKG+ P VT+ TL
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 143/323 (44%), Gaps = 44/323 (13%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV YT+LI CK ++ A +M G PNVVTYN L+ G+C
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG----- 240
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
+A + +M R IEP+V +F+ ++ + + K + + N M + + P V T
Sbjct: 241 -----DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT 295
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
Y S++ LC G +++A ++ M RNG P+ Y + K MK++ +M
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355
Query: 182 EDDLCV----------------------------------PNIHTYNILIGMFMALNRMD 207
+ + P+I TYN+L+ +++
Sbjct: 356 QKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE 415
Query: 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267
I+ +++ E+ +++ +YT++I G+C+ K ++A F + KG+ P +T+ T+
Sbjct: 416 KALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475
Query: 268 RGLIQSDMLRTWRRLKKKLDEES 290
G + ++ L KK+ E+
Sbjct: 476 SGFCRRGLIHEADSLFKKMKEDG 498
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 142/305 (46%), Gaps = 16/305 (5%)
Query: 1 MPNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER 60
+P++ +T L+ K+NR D+ +M G+ P + T N++++ VC S P
Sbjct: 80 LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVC--LSSQPCR- 136
Query: 61 FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA 120
A +M G EPD+ +F+ +L+ Y ++ + ++ + + G P V
Sbjct: 137 -------ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVV 189
Query: 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180
TYT++++CLC + A EL +M NG P+ TYN A L R M
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 181 KEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240
+ + PN+ T+ LI F+ + ++ +E++N + + D+ +Y LI+GLC
Sbjct: 250 MKRRI-EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGL 308
Query: 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS----DMLRTWRRLKKK-LDEESITFGS 295
EA Q F M G P +V + TL G +S D ++ + + +K + +IT+
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 296 EFQNY 300
Q Y
Sbjct: 369 LIQGY 373
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 11/263 (4%)
Query: 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF 61
PNV +T+LI + K+ ++ A+ MI+ V P+V TY L+NG+C L
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD----- 310
Query: 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT 121
A ++F M G P+ ++ ++H + ++ + + + M +KG+ T
Sbjct: 311 -----EARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181
YT +++ C GR + A+E+ +M P TYN A+ ++ M+
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 182 EDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241
+ ++ + NI TY I+I L +++ +++ + + ++ +YT +I G C +
Sbjct: 426 KREMDI-NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLI 484
Query: 242 KEACQYFVEMIEKGLLPQKVTFE 264
EA F +M E G LP + ++
Sbjct: 485 HEADSLFKKMKEDGFLPNESVYK 507
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,038,053
Number of Sequences: 539616
Number of extensions: 4600993
Number of successful extensions: 18385
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 189
Number of HSP's that attempted gapping in prelim test: 11223
Number of HSP's gapped (non-prelim): 2651
length of query: 307
length of database: 191,569,459
effective HSP length: 117
effective length of query: 190
effective length of database: 128,434,387
effective search space: 24402533530
effective search space used: 24402533530
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)