Query 021791
Match_columns 307
No_of_seqs 506 out of 1350
Neff 11.9
Searched_HMMs 29240
Date Mon Mar 25 09:21:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021791.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021791hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g26_A Pentatricopeptide repea 100.0 4.8E-36 1.6E-40 251.3 24.5 197 5-203 27-223 (501)
2 4g26_A Pentatricopeptide repea 100.0 4.9E-36 1.7E-40 251.2 23.7 208 66-274 7-224 (501)
3 2xpi_A Anaphase-promoting comp 100.0 9.9E-28 3.4E-32 207.6 32.2 273 2-291 303-581 (597)
4 2xpi_A Anaphase-promoting comp 100.0 4.2E-27 1.4E-31 203.7 31.2 271 3-290 199-546 (597)
5 1w3b_A UDP-N-acetylglucosamine 99.9 2.2E-22 7.4E-27 165.1 32.7 279 3-289 66-368 (388)
6 1w3b_A UDP-N-acetylglucosamine 99.9 3.5E-22 1.2E-26 163.9 31.7 250 6-274 137-387 (388)
7 2y4t_A DNAJ homolog subfamily 99.9 3.3E-21 1.1E-25 161.0 32.1 268 3-288 25-357 (450)
8 2y4t_A DNAJ homolog subfamily 99.9 5.6E-21 1.9E-25 159.7 32.2 261 3-272 59-375 (450)
9 3hym_B Cell division cycle pro 99.9 3.6E-20 1.2E-24 148.2 29.9 271 3-290 21-300 (330)
10 4eqf_A PEX5-related protein; a 99.9 1.6E-20 5.5E-25 152.7 22.6 267 3-285 64-352 (365)
11 3cv0_A Peroxisome targeting si 99.9 6.7E-20 2.3E-24 146.5 25.1 267 3-286 20-312 (327)
12 1fch_A Peroxisomal targeting s 99.9 5.9E-20 2E-24 149.4 25.2 267 3-285 63-355 (368)
13 3ieg_A DNAJ homolog subfamily 99.9 2.8E-18 9.5E-23 138.7 33.2 270 3-289 2-335 (359)
14 3ieg_A DNAJ homolog subfamily 99.9 4.9E-18 1.7E-22 137.3 33.6 263 3-274 36-354 (359)
15 2gw1_A Mitochondrial precursor 99.9 9.2E-19 3.2E-23 148.6 29.2 165 119-289 237-401 (514)
16 3spa_A Mtrpol, DNA-directed RN 99.9 1.8E-21 6.2E-26 169.1 11.9 150 4-168 127-286 (1134)
17 2gw1_A Mitochondrial precursor 99.8 4E-18 1.4E-22 144.7 26.1 271 4-291 186-480 (514)
18 3spa_A Mtrpol, DNA-directed RN 99.8 1.6E-20 5.4E-25 163.3 11.0 124 153-277 126-253 (1134)
19 1fch_A Peroxisomal targeting s 99.8 2.4E-18 8.1E-23 139.9 22.8 263 13-290 34-315 (368)
20 3mkr_A Coatomer subunit epsilo 99.8 5.7E-18 2E-22 133.0 23.8 253 11-290 6-265 (291)
21 4eqf_A PEX5-related protein; a 99.8 3.1E-18 1.1E-22 139.2 22.9 238 38-290 64-311 (365)
22 3hym_B Cell division cycle pro 99.8 1.4E-17 4.9E-22 133.1 26.4 259 3-277 55-322 (330)
23 3fp2_A TPR repeat-containing p 99.8 3.3E-17 1.1E-21 139.9 30.2 267 4-290 25-408 (537)
24 3fp2_A TPR repeat-containing p 99.8 6.4E-17 2.2E-21 138.1 31.3 280 3-290 58-458 (537)
25 3uq3_A Heat shock protein STI1 99.8 5.5E-17 1.9E-21 125.0 23.9 227 3-254 4-236 (258)
26 3mkr_A Coatomer subunit epsilo 99.8 1.3E-16 4.5E-21 125.2 25.9 247 6-282 36-287 (291)
27 2pl2_A Hypothetical conserved 99.8 3.9E-17 1.3E-21 122.8 20.5 201 81-288 2-213 (217)
28 3cv0_A Peroxisome targeting si 99.8 1.3E-16 4.4E-21 127.4 23.6 237 38-291 20-271 (327)
29 3uq3_A Heat shock protein STI1 99.8 1.8E-16 6E-21 122.2 22.4 227 39-290 5-237 (258)
30 1b89_A Protein (clathrin heavy 99.8 1.4E-17 4.7E-22 134.5 13.5 206 2-253 30-235 (449)
31 2h6f_A Protein farnesyltransfe 99.7 5E-15 1.7E-19 120.2 28.3 248 3-270 96-363 (382)
32 2pl2_A Hypothetical conserved 99.7 3.3E-16 1.1E-20 117.7 19.8 197 3-216 4-211 (217)
33 2ho1_A Type 4 fimbrial biogene 99.7 3.2E-15 1.1E-19 114.9 25.4 203 84-290 37-239 (252)
34 1xnf_A Lipoprotein NLPI; TPR, 99.7 3.5E-16 1.2E-20 121.8 20.2 248 15-283 16-269 (275)
35 1b89_A Protein (clathrin heavy 99.7 5.8E-18 2E-22 136.6 9.8 223 16-290 15-237 (449)
36 2ho1_A Type 4 fimbrial biogene 99.7 4.8E-15 1.6E-19 113.9 25.8 201 39-254 37-238 (252)
37 2vq2_A PILW, putative fimbrial 99.7 4.7E-15 1.6E-19 111.7 24.9 206 82-290 6-212 (225)
38 3u4t_A TPR repeat-containing p 99.7 2.4E-15 8E-20 117.0 23.0 236 4-254 3-250 (272)
39 2vq2_A PILW, putative fimbrial 99.7 9.7E-15 3.3E-19 110.0 25.1 212 38-265 7-220 (225)
40 2q7f_A YRRB protein; TPR, prot 99.7 1.3E-15 4.5E-20 116.2 19.2 202 37-254 21-222 (243)
41 2h6f_A Protein farnesyltransfe 99.7 7E-15 2.4E-19 119.4 24.2 233 39-289 97-348 (382)
42 2q7f_A YRRB protein; TPR, prot 99.7 1.9E-15 6.5E-20 115.4 19.8 205 81-291 20-224 (243)
43 3u4t_A TPR repeat-containing p 99.7 3.7E-15 1.3E-19 115.8 21.4 235 41-290 5-251 (272)
44 1ouv_A Conserved hypothetical 99.7 6.5E-14 2.2E-18 109.0 28.4 225 38-291 5-253 (273)
45 1ouv_A Conserved hypothetical 99.7 1.5E-13 5.1E-18 106.9 29.1 228 3-255 5-252 (273)
46 4abn_A Tetratricopeptide repea 99.7 3.4E-14 1.2E-18 119.2 26.7 218 62-286 81-318 (474)
47 1xnf_A Lipoprotein NLPI; TPR, 99.7 9.8E-15 3.4E-19 113.5 21.6 222 62-290 18-245 (275)
48 4a1s_A PINS, partner of inscut 99.7 1.7E-15 5.7E-20 125.0 17.2 274 5-289 49-372 (411)
49 3ro2_A PINS homolog, G-protein 99.7 5.2E-15 1.8E-19 118.2 16.3 276 4-290 5-333 (338)
50 3vtx_A MAMA; tetratricopeptide 99.7 9.6E-14 3.3E-18 101.3 21.7 167 83-254 4-170 (184)
51 2ond_A Cleavage stimulation fa 99.7 6E-13 2.1E-17 105.4 27.9 244 3-254 7-270 (308)
52 2ond_A Cleavage stimulation fa 99.6 3E-13 1E-17 107.1 26.0 221 66-291 33-272 (308)
53 3sf4_A G-protein-signaling mod 99.6 6.5E-15 2.2E-19 121.0 17.0 275 3-288 8-335 (406)
54 2xm6_A Protein corresponding t 99.6 6.2E-12 2.1E-16 106.2 33.2 208 64-290 202-433 (490)
55 2xm6_A Protein corresponding t 99.6 1.3E-11 4.5E-16 104.2 34.9 175 64-254 130-325 (490)
56 3vtx_A MAMA; tetratricopeptide 99.6 2.5E-13 8.5E-18 99.1 21.3 168 118-290 4-171 (184)
57 4g1t_A Interferon-induced prot 99.6 7.9E-13 2.7E-17 111.0 27.0 201 4-218 51-275 (472)
58 4g1t_A Interferon-induced prot 99.6 7.4E-12 2.5E-16 105.1 30.2 272 4-289 94-401 (472)
59 3nf1_A KLC 1, kinesin light ch 99.6 1.9E-14 6.4E-19 113.9 13.0 170 3-182 26-223 (311)
60 3nf1_A KLC 1, kinesin light ch 99.6 1E-13 3.5E-18 109.6 17.2 206 83-288 26-306 (311)
61 4abn_A Tetratricopeptide repea 99.6 7.3E-14 2.5E-18 117.2 17.0 214 20-251 84-318 (474)
62 2ooe_A Cleavage stimulation fa 99.6 1.8E-11 6.2E-16 104.4 30.6 217 67-288 256-491 (530)
63 2ooe_A Cleavage stimulation fa 99.6 1.9E-11 6.5E-16 104.3 30.3 269 3-289 12-385 (530)
64 1hz4_A MALT regulatory protein 99.6 1.2E-11 3.9E-16 100.7 26.8 272 7-288 17-321 (373)
65 3ulq_A Response regulator aspa 99.5 1.5E-12 5.3E-17 106.3 20.6 226 62-291 116-370 (383)
66 3as5_A MAMA; tetratricopeptide 99.5 1.9E-12 6.4E-17 94.2 18.7 163 86-253 10-172 (186)
67 3as5_A MAMA; tetratricopeptide 99.5 2.2E-12 7.7E-17 93.7 18.1 167 119-290 8-174 (186)
68 4gyw_A UDP-N-acetylglucosamine 99.5 1.6E-12 5.3E-17 113.8 19.3 166 83-253 8-173 (723)
69 3sf4_A G-protein-signaling mod 99.5 3.3E-13 1.1E-17 110.8 14.4 263 4-276 47-363 (406)
70 3ulq_A Response regulator aspa 99.5 9.6E-12 3.3E-16 101.6 23.0 263 14-286 22-332 (383)
71 3edt_B KLC 2, kinesin light ch 99.5 7.2E-13 2.5E-17 103.2 15.0 226 62-288 21-280 (283)
72 4i17_A Hypothetical protein; T 99.5 3.5E-11 1.2E-15 90.8 22.4 195 82-289 5-209 (228)
73 4a1s_A PINS, partner of inscut 99.5 5.1E-13 1.7E-17 110.1 13.1 240 5-254 87-372 (411)
74 4gyw_A UDP-N-acetylglucosamine 99.5 3.9E-12 1.3E-16 111.2 19.0 166 118-288 8-173 (723)
75 3q15_A PSP28, response regulat 99.5 4.4E-11 1.5E-15 97.5 23.5 222 62-288 114-364 (378)
76 4i17_A Hypothetical protein; T 99.5 4.7E-11 1.6E-15 90.1 21.6 201 37-261 5-214 (228)
77 1xi4_A Clathrin heavy chain; a 99.4 1.1E-10 3.7E-15 105.9 25.5 229 9-286 1054-1306(1630)
78 3edt_B KLC 2, kinesin light ch 99.4 3.4E-12 1.2E-16 99.3 14.3 161 94-254 11-198 (283)
79 1qqe_A Vesicular transport pro 99.4 2.4E-11 8.2E-16 95.4 19.1 238 21-288 2-268 (292)
80 3ro2_A PINS homolog, G-protein 99.4 2.4E-12 8.3E-17 102.7 13.5 241 4-254 43-332 (338)
81 1xi4_A Clathrin heavy chain; a 99.4 2.5E-10 8.4E-15 103.6 26.1 203 4-252 1105-1307(1630)
82 3q15_A PSP28, response regulat 99.4 1E-10 3.6E-15 95.3 20.7 231 9-253 106-364 (378)
83 3e4b_A ALGK; tetratricopeptide 99.4 2.9E-09 9.8E-14 88.8 28.1 260 5-289 142-421 (452)
84 3qky_A Outer membrane assembly 99.4 5.1E-11 1.7E-15 91.9 16.2 193 81-278 12-250 (261)
85 3e4b_A ALGK; tetratricopeptide 99.3 1.1E-10 3.8E-15 97.3 18.0 157 120-290 177-352 (452)
86 3mv2_B Coatomer subunit epsilo 99.3 1.9E-09 6.5E-14 83.6 23.4 144 103-252 85-238 (310)
87 2fo7_A Synthetic consensus TPR 99.3 2.6E-10 9E-15 78.0 16.6 125 124-252 6-130 (136)
88 2fo7_A Synthetic consensus TPR 99.3 3.3E-10 1.1E-14 77.5 16.9 130 86-219 3-132 (136)
89 3urz_A Uncharacterized protein 99.3 2.5E-10 8.5E-15 84.9 17.1 169 86-264 6-194 (208)
90 1qqe_A Vesicular transport pro 99.3 5E-10 1.7E-14 87.9 19.2 207 19-252 32-267 (292)
91 1hz4_A MALT regulatory protein 99.3 1.2E-09 4E-14 88.8 21.3 239 6-254 55-322 (373)
92 3mv2_B Coatomer subunit epsilo 99.3 1.3E-09 4.3E-14 84.6 19.9 184 68-261 85-287 (310)
93 3rjv_A Putative SEL1 repeat pr 99.3 3.9E-09 1.3E-13 78.6 21.0 178 66-256 3-199 (212)
94 3qky_A Outer membrane assembly 99.2 2.2E-09 7.4E-14 82.7 19.9 172 117-290 13-225 (261)
95 3dra_A Protein farnesyltransfe 99.2 2.7E-08 9.2E-13 77.8 25.5 223 15-254 43-287 (306)
96 2pzi_A Probable serine/threoni 99.2 2.4E-10 8.2E-15 100.2 15.2 184 95-286 402-602 (681)
97 2pzi_A Probable serine/threoni 99.2 1.9E-10 6.5E-15 100.8 14.3 172 62-240 404-583 (681)
98 3urz_A Uncharacterized protein 99.2 1.5E-09 5E-14 80.7 16.9 166 120-291 5-188 (208)
99 2yhc_A BAMD, UPF0169 lipoprote 99.2 5.7E-09 1.9E-13 78.5 20.0 188 83-292 3-216 (225)
100 3qou_A Protein YBBN; thioredox 99.2 8.2E-10 2.8E-14 86.4 15.8 163 118-285 116-280 (287)
101 4ga2_A E3 SUMO-protein ligase 99.2 1.2E-10 4E-15 81.8 9.5 138 62-204 10-148 (150)
102 2vsy_A XCC0866; transferase, g 99.2 1.3E-09 4.5E-14 93.7 17.5 164 62-231 2-168 (568)
103 2r5s_A Uncharacterized protein 99.2 4.9E-10 1.7E-14 80.9 12.6 160 88-252 10-171 (176)
104 3qou_A Protein YBBN; thioredox 99.2 1.8E-09 6.2E-14 84.4 16.4 168 81-253 114-283 (287)
105 2yhc_A BAMD, UPF0169 lipoprote 99.2 8.6E-09 2.9E-13 77.5 19.4 173 62-254 17-213 (225)
106 3rjv_A Putative SEL1 repeat pr 99.2 1.8E-08 6.1E-13 75.0 20.7 178 101-291 3-199 (212)
107 4ga2_A E3 SUMO-protein ligase 99.2 1E-09 3.5E-14 77.0 12.9 146 90-240 3-149 (150)
108 2ifu_A Gamma-SNAP; membrane fu 99.1 6.5E-09 2.2E-13 82.1 18.5 216 62-282 4-254 (307)
109 2vsy_A XCC0866; transferase, g 99.1 2.6E-09 8.8E-14 91.9 17.4 154 97-255 2-158 (568)
110 2r5s_A Uncharacterized protein 99.1 9.7E-10 3.3E-14 79.3 12.0 163 120-287 7-171 (176)
111 3dra_A Protein farnesyltransfe 99.1 4.3E-08 1.5E-12 76.7 22.0 217 66-288 50-286 (306)
112 4e6h_A MRNA 3'-END-processing 99.1 6.4E-08 2.2E-12 84.0 22.9 234 21-270 326-584 (679)
113 3u3w_A Transcriptional activat 99.1 8.2E-08 2.8E-12 75.2 21.3 162 91-252 82-264 (293)
114 3q7a_A Farnesyltransferase alp 99.0 6.5E-07 2.2E-11 70.9 25.8 231 8-254 58-331 (349)
115 1hh8_A P67PHOX, NCF-2, neutrop 99.0 4.2E-08 1.4E-12 72.9 17.9 92 87-183 9-100 (213)
116 1hh8_A P67PHOX, NCF-2, neutrop 99.0 4E-08 1.4E-12 73.0 17.4 127 122-254 9-150 (213)
117 2ifu_A Gamma-SNAP; membrane fu 99.0 1.9E-08 6.4E-13 79.5 16.2 219 16-247 3-254 (307)
118 4e6h_A MRNA 3'-END-processing 99.0 9E-08 3.1E-12 83.1 20.9 221 66-291 326-572 (679)
119 1a17_A Serine/threonine protei 99.0 4.3E-08 1.5E-12 69.5 16.1 91 160-253 19-109 (166)
120 3u3w_A Transcriptional activat 99.0 6.3E-07 2.2E-11 70.1 23.9 208 72-288 34-265 (293)
121 2c2l_A CHIP, carboxy terminus 99.0 1.2E-08 3.9E-13 79.6 13.6 195 83-289 3-199 (281)
122 2qfc_A PLCR protein; TPR, HTH, 99.0 2E-07 6.7E-12 73.1 20.7 170 84-253 75-265 (293)
123 1a17_A Serine/threonine protei 99.0 8.1E-08 2.8E-12 68.1 16.7 132 118-253 12-145 (166)
124 2e2e_A Formate-dependent nitri 99.0 1.7E-08 6E-13 72.7 12.7 120 131-254 22-144 (177)
125 4gco_A Protein STI-1; structur 98.9 4.9E-08 1.7E-12 66.0 14.0 60 156-217 49-108 (126)
126 2qfc_A PLCR protein; TPR, HTH, 98.9 3.5E-07 1.2E-11 71.6 20.8 169 119-287 75-264 (293)
127 3gyz_A Chaperone protein IPGC; 98.9 1.3E-07 4.4E-12 66.0 16.1 98 154-254 36-133 (151)
128 4gco_A Protein STI-1; structur 98.9 6.2E-08 2.1E-12 65.5 14.0 110 84-197 13-122 (126)
129 1na0_A Designed protein CTPR3; 98.9 8.1E-08 2.8E-12 64.4 14.6 98 84-183 9-106 (125)
130 1na0_A Designed protein CTPR3; 98.9 9.3E-08 3.2E-12 64.0 14.5 96 120-218 10-105 (125)
131 2lni_A Stress-induced-phosphop 98.9 8.7E-08 3E-12 65.1 14.3 116 83-202 15-130 (133)
132 3gw4_A Uncharacterized protein 98.9 2.4E-08 8.2E-13 73.5 12.2 159 95-254 3-176 (203)
133 3gyz_A Chaperone protein IPGC; 98.9 2.6E-07 8.9E-12 64.5 16.5 98 119-219 36-133 (151)
134 2lni_A Stress-induced-phosphop 98.9 8.4E-08 2.9E-12 65.2 13.6 97 119-218 16-112 (133)
135 2vyi_A SGTA protein; chaperone 98.9 9.7E-08 3.3E-12 64.5 13.8 118 84-205 12-129 (131)
136 2e2e_A Formate-dependent nitri 98.9 5.7E-08 1.9E-12 69.9 13.2 120 96-219 22-144 (177)
137 1p5q_A FKBP52, FK506-binding p 98.9 8.9E-08 3E-12 76.6 15.5 151 99-253 128-293 (336)
138 3q7a_A Farnesyltransferase alp 98.9 7.9E-07 2.7E-11 70.4 20.0 219 65-289 70-331 (349)
139 2vyi_A SGTA protein; chaperone 98.9 1.1E-07 3.6E-12 64.3 13.3 97 120-219 13-109 (131)
140 2vgx_A Chaperone SYCD; alterna 98.8 5.2E-08 1.8E-12 68.0 11.1 98 154-254 21-118 (148)
141 1p5q_A FKBP52, FK506-binding p 98.8 1.7E-07 5.9E-12 74.9 15.5 132 83-217 146-292 (336)
142 3gw4_A Uncharacterized protein 98.8 7E-08 2.4E-12 70.9 12.4 156 62-218 5-175 (203)
143 2fbn_A 70 kDa peptidylprolyl i 98.8 1.4E-08 4.9E-13 74.6 8.1 30 119-148 38-67 (198)
144 2c2l_A CHIP, carboxy terminus 98.8 7.4E-08 2.5E-12 75.0 11.8 195 3-218 3-198 (281)
145 2uy1_A Cleavage stimulation fa 98.8 2.1E-05 7.3E-10 66.1 27.2 269 1-287 44-411 (493)
146 2vgx_A Chaperone SYCD; alterna 98.8 5.3E-08 1.8E-12 67.9 9.5 98 119-219 21-118 (148)
147 1elw_A TPR1-domain of HOP; HOP 98.8 8.4E-07 2.9E-11 58.6 14.7 97 85-183 5-101 (118)
148 4f3v_A ESX-1 secretion system 98.8 5.8E-07 2E-11 68.9 15.4 196 62-266 19-247 (282)
149 4f3v_A ESX-1 secretion system 98.8 5.1E-07 1.7E-11 69.2 15.0 190 96-292 18-240 (282)
150 2fbn_A 70 kDa peptidylprolyl i 98.8 2.9E-08 1E-12 72.9 8.0 163 125-290 10-187 (198)
151 3dss_A Geranylgeranyl transfer 98.7 1.4E-05 4.7E-10 63.0 22.9 216 66-289 47-304 (331)
152 1elw_A TPR1-domain of HOP; HOP 98.7 1.1E-06 3.8E-11 58.0 14.7 95 121-218 6-100 (118)
153 3upv_A Heat shock protein STI1 98.7 6.5E-07 2.2E-11 60.3 13.2 18 128-145 13-30 (126)
154 3upv_A Heat shock protein STI1 98.7 7.7E-07 2.6E-11 59.9 13.4 98 154-254 4-101 (126)
155 3sz7_A HSC70 cochaperone (SGT) 98.7 6.7E-07 2.3E-11 63.4 13.5 100 83-184 10-109 (164)
156 3sz7_A HSC70 cochaperone (SGT) 98.7 1.3E-06 4.4E-11 61.9 15.0 97 155-254 12-108 (164)
157 3q49_B STIP1 homology and U bo 98.7 2.1E-06 7.2E-11 58.6 15.6 99 153-254 8-106 (137)
158 2xcb_A PCRH, regulatory protei 98.7 7.1E-07 2.4E-11 61.6 13.1 96 156-254 20-115 (142)
159 3dss_A Geranylgeranyl transfer 98.7 6.2E-05 2.1E-09 59.4 27.3 241 5-254 27-304 (331)
160 2kck_A TPR repeat; tetratricop 98.7 5.3E-07 1.8E-11 59.0 11.6 11 239-249 91-101 (112)
161 2xcb_A PCRH, regulatory protei 98.7 4.9E-07 1.7E-11 62.5 11.8 97 85-183 19-115 (142)
162 3q49_B STIP1 homology and U bo 98.6 1E-06 3.4E-11 60.2 12.9 99 83-183 8-106 (137)
163 1elr_A TPR2A-domain of HOP; HO 98.6 6.6E-07 2.3E-11 60.4 11.9 108 156-267 6-119 (131)
164 4gcn_A Protein STI-1; structur 98.6 1E-06 3.4E-11 59.6 12.5 93 159-253 13-111 (127)
165 4gcn_A Protein STI-1; structur 98.6 1E-06 3.4E-11 59.6 12.4 96 86-182 10-111 (127)
166 2kck_A TPR repeat; tetratricop 98.6 7.5E-07 2.6E-11 58.3 11.1 104 188-293 4-110 (112)
167 1elr_A TPR2A-domain of HOP; HO 98.6 8.7E-07 3E-11 59.8 11.4 98 85-183 5-108 (131)
168 2uy1_A Cleavage stimulation fa 98.6 5.5E-05 1.9E-09 63.6 24.5 263 5-286 16-380 (493)
169 2dba_A Smooth muscle cell asso 98.6 2.8E-06 9.5E-11 58.7 14.0 98 83-183 27-128 (148)
170 4b4t_Q 26S proteasome regulato 98.6 1.4E-05 4.7E-10 66.1 20.3 167 87-253 58-244 (434)
171 2dba_A Smooth muscle cell asso 98.6 3.8E-06 1.3E-10 58.0 14.6 98 118-219 27-128 (148)
172 1hxi_A PEX5, peroxisome target 98.5 1.8E-06 6.3E-11 57.7 11.2 90 125-217 23-112 (121)
173 1hxi_A PEX5, peroxisome target 98.5 1.6E-06 5.4E-11 58.0 10.8 91 159-252 22-112 (121)
174 4b4t_Q 26S proteasome regulato 98.5 6.8E-06 2.3E-10 67.9 16.2 197 11-217 11-243 (434)
175 3ro3_A PINS homolog, G-protein 98.5 1.7E-06 5.7E-11 60.7 10.5 132 121-252 11-156 (164)
176 1kt0_A FKBP51, 51 kDa FK506-bi 98.5 4.1E-06 1.4E-10 69.9 14.2 131 118-251 267-412 (457)
177 1wao_1 Serine/threonine protei 98.5 1.6E-06 5.4E-11 72.8 11.4 119 162-284 14-134 (477)
178 1kt0_A FKBP51, 51 kDa FK506-bi 98.5 4.6E-06 1.6E-10 69.6 14.1 133 83-218 267-414 (457)
179 3ro3_A PINS homolog, G-protein 98.4 2.6E-06 8.8E-11 59.7 10.8 136 154-289 9-158 (164)
180 2xev_A YBGF; tetratricopeptide 98.4 8.8E-06 3E-10 54.8 13.1 92 160-254 8-105 (129)
181 1wao_1 Serine/threonine protei 98.4 8.8E-07 3E-11 74.3 9.4 117 129-249 16-134 (477)
182 1ihg_A Cyclophilin 40; ppiase 98.4 8.3E-06 2.8E-10 66.0 14.8 122 156-281 225-362 (370)
183 2xev_A YBGF; tetratricopeptide 98.4 1.8E-05 6E-10 53.2 14.4 92 90-183 8-105 (129)
184 3k9i_A BH0479 protein; putativ 98.4 6.8E-07 2.3E-11 59.4 6.9 84 98-182 4-89 (117)
185 1ihg_A Cyclophilin 40; ppiase 98.4 5.4E-06 1.8E-10 67.1 13.1 97 86-183 225-336 (370)
186 3k9i_A BH0479 protein; putativ 98.4 2.3E-06 7.8E-11 56.8 8.3 87 167-254 3-90 (117)
187 3rkv_A Putative peptidylprolyl 98.4 1.3E-05 4.5E-10 56.5 12.7 71 188-261 61-131 (162)
188 3rkv_A Putative peptidylprolyl 98.3 1.6E-05 5.5E-10 56.0 12.5 99 84-183 11-126 (162)
189 2if4_A ATFKBP42; FKBP-like, al 98.3 5.3E-06 1.8E-10 66.3 10.2 60 192-252 232-291 (338)
190 2if4_A ATFKBP42; FKBP-like, al 98.3 6.5E-06 2.2E-10 65.8 10.3 147 86-254 181-328 (338)
191 1dce_A Protein (RAB geranylger 98.3 0.00029 9.9E-09 60.3 20.8 170 100-275 45-241 (567)
192 3n71_A Histone lysine methyltr 98.2 1.5E-05 5.1E-10 66.7 12.3 127 163-289 318-464 (490)
193 1dce_A Protein (RAB geranylger 98.2 0.00029 9.8E-09 60.3 19.9 186 16-207 40-243 (567)
194 2hr2_A Hypothetical protein; a 98.2 4.4E-05 1.5E-09 53.0 11.8 28 121-148 13-40 (159)
195 1klx_A Cysteine rich protein B 98.2 0.00018 6.2E-09 49.1 14.6 112 62-184 8-127 (138)
196 2kat_A Uncharacterized protein 98.1 4E-05 1.4E-09 50.4 10.5 80 172-254 3-82 (115)
197 3n71_A Histone lysine methyltr 98.1 2.3E-05 8E-10 65.5 11.0 126 129-254 319-464 (490)
198 2hr2_A Hypothetical protein; a 98.1 6.8E-05 2.3E-09 52.0 10.9 100 155-254 12-131 (159)
199 1klx_A Cysteine rich protein B 98.1 0.00037 1.3E-08 47.5 14.6 110 134-255 10-127 (138)
200 2kat_A Uncharacterized protein 98.1 3.5E-05 1.2E-09 50.7 9.1 60 120-180 20-79 (115)
201 2l6j_A TPR repeat-containing p 98.1 5.8E-06 2E-10 54.0 5.2 65 189-254 3-67 (111)
202 1na3_A Designed protein CTPR2; 98.0 0.00014 4.6E-09 45.3 10.3 23 158-180 47-69 (91)
203 2l6j_A TPR repeat-containing p 98.0 4.1E-05 1.4E-09 49.8 8.1 60 122-182 7-66 (111)
204 1na3_A Designed protein CTPR2; 97.9 0.00021 7.2E-09 44.3 9.8 80 190-271 9-88 (91)
205 3ma5_A Tetratricopeptide repea 97.8 0.00015 5.2E-09 46.3 8.7 66 187-253 4-69 (100)
206 3ma5_A Tetratricopeptide repea 97.8 9.4E-05 3.2E-09 47.3 7.4 60 85-145 8-67 (100)
207 1zu2_A Mitochondrial import re 97.8 8.6E-05 2.9E-09 51.4 7.4 94 170-268 18-132 (158)
208 1zu2_A Mitochondrial import re 97.8 9.3E-05 3.2E-09 51.3 7.1 95 134-233 17-132 (158)
209 3ly7_A Transcriptional activat 97.7 0.0018 6.3E-08 51.4 14.4 76 187-266 274-349 (372)
210 3ly7_A Transcriptional activat 97.7 0.0046 1.6E-07 49.2 16.5 140 35-183 190-339 (372)
211 2kc7_A BFR218_protein; tetratr 97.2 0.0027 9.2E-08 40.0 8.5 57 197-254 7-64 (99)
212 3qww_A SET and MYND domain-con 97.2 0.0018 6.1E-08 53.3 8.9 88 166-253 310-410 (433)
213 2kc7_A BFR218_protein; tetratr 97.2 0.0016 5.4E-08 41.1 7.0 25 122-146 38-62 (99)
214 3qwp_A SET and MYND domain-con 97.2 0.0023 7.9E-08 52.7 9.5 93 161-253 294-399 (429)
215 1wy6_A Hypothetical protein ST 97.1 0.026 8.7E-07 37.5 13.7 64 227-291 93-156 (172)
216 3mkq_A Coatomer beta'-subunit; 97.1 0.023 7.7E-07 50.9 16.0 130 88-251 633-762 (814)
217 3qww_A SET and MYND domain-con 97.1 0.002 7E-08 53.0 8.3 88 131-218 310-410 (433)
218 3bee_A Putative YFRE protein; 97.1 0.011 3.8E-07 36.9 9.9 67 187-254 3-72 (93)
219 3qwp_A SET and MYND domain-con 97.0 0.003 1E-07 52.0 8.8 93 10-112 293-399 (429)
220 3bee_A Putative YFRE protein; 97.0 0.011 3.7E-07 36.9 9.3 66 82-148 4-72 (93)
221 3mkq_A Coatomer beta'-subunit; 97.0 0.016 5.4E-07 51.9 13.9 45 95-145 663-707 (814)
222 3u64_A Protein TP_0956; tetrat 96.9 0.022 7.4E-07 43.6 11.7 97 62-160 176-283 (301)
223 1pc2_A Mitochondria fission pr 96.8 0.018 6E-07 39.5 9.9 87 169-260 13-104 (152)
224 2v5f_A Prolyl 4-hydroxylase su 96.8 0.025 8.5E-07 36.1 9.9 66 83-148 4-75 (104)
225 1wy6_A Hypothetical protein ST 96.8 0.058 2E-06 35.9 13.7 137 62-221 20-156 (172)
226 2v5f_A Prolyl 4-hydroxylase su 96.5 0.04 1.4E-06 35.1 9.5 66 118-183 4-75 (104)
227 3u64_A Protein TP_0956; tetrat 96.5 0.034 1.1E-06 42.6 10.2 109 171-287 180-296 (301)
228 3mkq_B Coatomer subunit alpha; 96.5 0.13 4.3E-06 36.2 13.6 131 126-287 12-142 (177)
229 1pc2_A Mitochondria fission pr 96.5 0.03 1E-06 38.3 9.0 83 63-147 12-99 (152)
230 4h7y_A Dual specificity protei 96.3 0.14 4.7E-06 34.8 11.3 53 168-222 74-126 (161)
231 4h7y_A Dual specificity protei 96.3 0.15 5E-06 34.7 12.0 115 81-199 10-137 (161)
232 3mkq_B Coatomer subunit alpha; 96.2 0.2 6.8E-06 35.2 13.1 130 91-251 12-141 (177)
233 1nzn_A CGI-135 protein, fissio 95.7 0.25 8.6E-06 32.5 10.1 64 153-218 34-102 (126)
234 1nzn_A CGI-135 protein, fissio 95.6 0.11 3.9E-06 34.1 8.3 83 101-184 18-104 (126)
235 2ff4_A Probable regulatory pro 95.3 0.35 1.2E-05 39.2 12.1 73 192-265 173-250 (388)
236 4gns_B Protein CSD3, chitin bi 95.2 0.17 5.7E-06 44.6 10.3 130 86-217 250-398 (754)
237 4gns_B Protein CSD3, chitin bi 95.1 0.25 8.6E-06 43.5 11.2 127 8-146 252-398 (754)
238 4ady_A RPN2, 26S proteasome re 94.6 2.5 8.7E-05 38.3 16.3 121 127-253 498-622 (963)
239 1v54_E Cytochrome C oxidase po 94.4 0.5 1.7E-05 29.5 8.7 44 139-182 30-73 (109)
240 4ady_A RPN2, 26S proteasome re 94.4 2.9 0.0001 37.9 16.8 182 66-253 471-657 (963)
241 2ff4_A Probable regulatory pro 94.2 0.32 1.1E-05 39.4 9.2 59 122-181 174-232 (388)
242 2y69_E Cytochrome C oxidase su 93.3 1.2 4E-05 29.6 8.7 46 138-183 72-117 (152)
243 4fhn_B Nucleoporin NUP120; pro 92.6 3.3 0.00011 38.9 14.3 147 89-243 817-989 (1139)
244 4b4t_P 26S proteasome regulato 92.3 4.1 0.00014 33.6 19.1 191 62-253 29-246 (445)
245 3o48_A Mitochondria fission 1 92.1 1.7 5.9E-05 28.8 9.9 52 62-113 56-107 (134)
246 3o48_A Mitochondria fission 1 91.8 1.9 6.5E-05 28.6 9.4 72 187-260 37-111 (134)
247 1v54_E Cytochrome C oxidase po 91.7 1.6 5.3E-05 27.4 9.8 63 205-268 25-87 (109)
248 3lpz_A GET4 (YOR164C homolog); 91.0 4.7 0.00016 31.7 18.6 132 66-217 76-214 (336)
249 4b4t_R RPN7, 26S proteasome re 90.9 5.4 0.00019 32.7 12.5 100 85-184 132-238 (429)
250 4fhn_B Nucleoporin NUP120; pro 90.5 7.4 0.00025 36.6 14.3 146 124-276 817-987 (1139)
251 3lvg_A Clathrin heavy chain 1; 90.4 0.026 8.8E-07 46.6 -1.7 218 3-247 82-326 (624)
252 2y69_E Cytochrome C oxidase su 90.1 2.9 9.9E-05 27.8 11.1 62 206-268 69-130 (152)
253 3txn_A 26S proteasome regulato 90.0 6.7 0.00023 31.7 13.0 166 86-252 21-208 (394)
254 3ffl_A Anaphase-promoting comp 89.3 2.6 9E-05 29.2 7.7 63 155-217 21-90 (167)
255 4b4t_P 26S proteasome regulato 88.6 9.4 0.00032 31.5 18.2 188 98-286 30-244 (445)
256 3ffl_A Anaphase-promoting comp 88.1 5 0.00017 27.8 8.6 24 157-180 66-89 (167)
257 1y8m_A FIS1; mitochondria, unk 87.5 4.9 0.00017 27.0 12.0 52 62-113 55-106 (144)
258 4b4t_R RPN7, 26S proteasome re 87.5 8.3 0.00029 31.6 11.2 99 120-218 132-236 (429)
259 1y8m_A FIS1; mitochondria, unk 87.2 5.1 0.00017 27.0 11.3 68 116-183 36-106 (144)
260 3esl_A Checkpoint serine/threo 86.3 7.5 0.00026 27.9 9.5 56 168-223 93-148 (202)
261 1zbp_A Hypothetical protein VP 86.0 3.3 0.00011 31.3 7.2 115 161-289 4-129 (273)
262 2wpv_A GET4, UPF0363 protein Y 85.5 11 0.00038 29.3 17.2 130 68-217 76-215 (312)
263 1zbp_A Hypothetical protein VP 84.1 8.1 0.00028 29.2 8.5 114 127-254 5-129 (273)
264 3txn_A 26S proteasome regulato 84.0 15 0.00053 29.6 22.3 166 6-181 21-208 (394)
265 3esl_A Checkpoint serine/threo 83.9 9.9 0.00034 27.3 10.0 59 203-261 92-151 (202)
266 3lvg_A Clathrin heavy chain 1; 83.2 0.0082 2.8E-07 49.4 -8.2 187 83-286 82-317 (624)
267 2uwj_G Type III export protein 81.3 7.7 0.00026 24.2 7.3 13 164-176 49-61 (115)
268 2p58_C Putative type III secre 80.6 8.2 0.00028 24.1 8.2 49 164-219 50-98 (116)
269 3eu9_A Huntingtin-interacting 79.4 3.2 0.00011 30.3 5.2 201 71-290 24-237 (240)
270 1k1a_A B-cell lymphoma 3-encod 78.8 16 0.00056 26.5 9.3 181 90-284 12-204 (241)
271 2nsz_A Programmed cell death p 78.0 12 0.00042 24.6 7.8 23 158-180 11-33 (129)
272 3eiq_C Programmed cell death p 77.4 25 0.00087 27.9 16.5 79 7-96 57-135 (358)
273 4a1g_A Mitotic checkpoint seri 76.3 16 0.00053 25.0 9.5 51 173-223 84-134 (152)
274 1qsa_A Protein (soluble lytic 75.8 39 0.0013 29.3 20.9 115 169-288 229-347 (618)
275 2ion_A PDCD4, programmed cell 74.8 17 0.00059 24.7 7.8 25 157-181 12-36 (152)
276 1wdy_A 2-5A-dependent ribonucl 74.3 4.6 0.00016 30.4 4.9 247 9-294 7-280 (285)
277 4a1g_A Mitotic checkpoint seri 73.5 19 0.00064 24.6 9.6 55 207-261 82-137 (152)
278 1ug3_A EIF4GI, eukaryotic prot 73.2 32 0.0011 27.1 11.1 96 7-112 14-113 (339)
279 2d2s_A Exocyst complex compone 70.4 30 0.001 25.6 11.1 89 9-110 23-117 (235)
280 1k1a_A B-cell lymphoma 3-encod 69.5 15 0.0005 26.7 6.6 25 11-35 13-37 (241)
281 2wvi_A Mitotic checkpoint seri 69.3 25 0.00086 24.3 9.0 50 174-223 80-129 (164)
282 3hra_A Ankyrin repeat family p 67.4 21 0.00073 25.0 6.9 180 93-281 11-196 (201)
283 4aez_C MAD3, mitotic spindle c 67.2 16 0.00054 26.8 5.9 51 208-258 132-183 (223)
284 2zu6_B Programmed cell death p 66.7 43 0.0015 26.0 10.7 73 193-266 169-243 (307)
285 3kea_A K1L; tropism, ANK repea 65.1 30 0.001 26.2 7.7 191 72-284 47-242 (285)
286 2d2s_A Exocyst complex compone 64.9 40 0.0014 24.9 8.5 90 125-218 24-119 (235)
287 2fe3_A Peroxide operon regulat 63.9 30 0.001 23.2 7.3 32 133-164 35-66 (145)
288 2xig_A Ferric uptake regulatio 63.8 31 0.0011 23.3 7.2 13 135-147 42-54 (150)
289 2wvi_A Mitotic checkpoint seri 63.1 34 0.0012 23.6 10.0 56 207-262 77-133 (164)
290 4b4t_S RPN3, 26S proteasome re 62.1 57 0.0019 27.5 9.0 65 4-78 231-299 (523)
291 4aez_C MAD3, mitotic spindle c 62.0 44 0.0015 24.5 8.0 83 138-223 96-183 (223)
292 2nsz_A Programmed cell death p 60.9 32 0.0011 22.6 9.2 72 6-86 9-80 (129)
293 2uwj_G Type III export protein 60.8 28 0.00095 21.8 7.5 85 99-193 21-105 (115)
294 2wpv_A GET4, UPF0363 protein Y 59.8 59 0.002 25.3 19.2 127 106-252 79-215 (312)
295 2p58_C Putative type III secre 59.5 30 0.001 21.7 8.2 85 99-193 22-106 (116)
296 3ljn_A Hypothetical protein; a 58.7 60 0.0021 25.4 8.7 220 37-285 16-266 (364)
297 1wdy_A 2-5A-dependent ribonucl 58.7 26 0.00088 26.1 6.3 200 71-284 20-240 (285)
298 2w57_A Ferric uptake regulatio 57.9 37 0.0013 22.9 6.2 35 134-168 32-66 (150)
299 1mzb_A Ferric uptake regulatio 57.7 33 0.0011 22.6 5.9 21 135-155 34-54 (136)
300 2ion_A PDCD4, programmed cell 57.5 42 0.0014 22.8 9.2 72 6-86 11-82 (152)
301 3kae_A CDC27, possible protein 57.4 47 0.0016 23.3 8.3 38 255-292 201-240 (242)
302 1zl8_A LIN-7; heterodimer, alp 57.2 20 0.00067 18.9 5.1 46 239-286 7-52 (53)
303 2b7e_A PRE-mRNA processing pro 56.9 15 0.0005 20.3 3.2 29 242-270 3-31 (59)
304 3eyy_A Putative iron uptake re 56.0 29 0.00099 23.3 5.4 32 135-166 33-64 (145)
305 3eu9_A Huntingtin-interacting 55.3 19 0.00064 26.0 4.9 147 90-250 79-232 (240)
306 3jxi_A Vanilloid receptor-rela 54.7 11 0.00038 27.9 3.6 195 91-291 9-253 (260)
307 4ets_A Ferric uptake regulatio 54.1 44 0.0015 23.0 6.2 14 134-147 47-60 (162)
308 1ug3_A EIF4GI, eukaryotic prot 52.3 57 0.0019 25.7 7.4 24 87-110 14-37 (339)
309 1mzb_A Ferric uptake regulatio 51.6 36 0.0012 22.4 5.3 22 206-227 34-55 (136)
310 2rg8_A Programmed cell death p 51.1 49 0.0017 22.8 6.0 67 7-84 13-79 (165)
311 2zu6_B Programmed cell death p 48.7 92 0.0032 24.1 13.0 69 157-227 169-239 (307)
312 3eiq_C Programmed cell death p 47.9 1E+02 0.0036 24.5 8.5 24 8-31 221-244 (358)
313 2o03_A Probable zinc uptake re 47.8 51 0.0017 21.5 5.5 47 9-55 15-61 (131)
314 2ijq_A Hypothetical protein; s 47.8 65 0.0022 22.2 7.3 50 203-252 45-102 (161)
315 3mwm_A ZUR, putative metal upt 47.3 47 0.0016 22.0 5.3 48 8-55 17-64 (139)
316 2w57_A Ferric uptake regulatio 47.0 41 0.0014 22.7 5.1 58 216-274 8-66 (150)
317 2o03_A Probable zinc uptake re 46.6 43 0.0015 21.9 5.0 40 129-168 20-59 (131)
318 3aji_A 26S proteasome non-ATPa 46.2 31 0.0011 24.8 4.8 19 11-29 10-28 (231)
319 3bge_A Predicted ATPase; struc 45.9 80 0.0027 22.6 9.7 47 7-53 7-56 (201)
320 2ijq_A Hypothetical protein; s 45.0 73 0.0025 21.9 8.2 59 157-217 36-102 (161)
321 3jxi_A Vanilloid receptor-rela 44.9 15 0.0005 27.3 2.8 50 62-111 15-73 (260)
322 3hra_A Ankyrin repeat family p 43.3 44 0.0015 23.2 5.2 129 91-225 43-173 (201)
323 3mwm_A ZUR, putative metal upt 43.0 39 0.0013 22.4 4.4 41 127-167 21-61 (139)
324 3bu8_A Telomeric repeat-bindin 42.9 95 0.0032 22.6 11.2 116 87-206 20-163 (235)
325 2rpa_A Katanin P60 ATPase-cont 42.6 51 0.0017 19.4 4.5 25 230-254 17-41 (78)
326 3ltj_A Alpharep-4; protein eng 42.4 85 0.0029 21.9 19.8 170 82-272 26-195 (201)
327 2etb_A Transient receptor pote 41.0 55 0.0019 24.0 5.5 57 90-147 5-71 (256)
328 2p22_A Suppressor protein STP2 41.0 90 0.0031 21.8 6.2 49 2-51 109-157 (174)
329 2cos_A Serine/threonine protei 40.8 40 0.0014 18.1 3.2 36 247-287 12-49 (54)
330 3kae_A CDC27, possible protein 40.5 94 0.0032 21.9 6.4 24 263-286 117-140 (242)
331 3lxu_X Tripeptidyl-peptidase 2 40.2 1.9E+02 0.0065 27.9 9.5 36 202-239 1296-1331(1354)
332 2xig_A Ferric uptake regulatio 40.2 83 0.0028 21.2 8.6 62 73-135 16-77 (150)
333 3eyy_A Putative iron uptake re 39.2 84 0.0029 21.0 6.4 61 73-135 8-68 (145)
334 1bpo_A Protein (clathrin); cla 39.1 1.7E+02 0.0058 24.4 11.0 100 112-214 354-453 (494)
335 2fu4_A Ferric uptake regulatio 38.7 58 0.002 18.9 7.4 58 75-133 8-66 (83)
336 4gq2_M Nucleoporin NUP120; bet 38.7 2.4E+02 0.0082 26.0 10.6 49 191-239 898-950 (950)
337 3c1d_A Protein ORAA, regulator 38.6 92 0.0031 21.2 11.6 49 66-116 47-95 (159)
338 3ltm_A Alpha-REP4; protein eng 38.6 1E+02 0.0034 21.7 19.4 171 82-273 31-201 (211)
339 4fke_A Aminopeptidase N; zinc 38.1 2.4E+02 0.0082 25.9 17.4 52 129-183 736-787 (909)
340 3kea_A K1L; tropism, ANK repea 37.4 1.3E+02 0.0044 22.6 7.4 185 91-295 35-223 (285)
341 4gq2_M Nucleoporin NUP120; bet 37.3 2.5E+02 0.0086 25.9 11.0 23 194-216 844-866 (950)
342 2r9g_A AAA ATPase, central reg 37.2 1.1E+02 0.0039 21.9 11.6 17 18-34 28-44 (204)
343 1bd8_A P19INK4D CDK4/6 inhibit 36.6 49 0.0017 21.8 4.3 12 272-283 142-153 (156)
344 3e3v_A Regulatory protein RECX 36.5 1.1E+02 0.0037 21.4 9.9 48 102-150 51-98 (177)
345 2fe3_A Peroxide operon regulat 36.0 96 0.0033 20.6 8.1 62 73-135 11-72 (145)
346 2pnn_A Transient receptor pote 35.0 66 0.0023 23.8 5.2 89 90-179 16-123 (273)
347 1oai_A Nuclear RNA export fact 34.6 37 0.0013 18.7 2.7 23 167-189 33-55 (59)
348 4ets_A Ferric uptake regulatio 34.4 1.1E+02 0.0038 20.9 6.8 62 74-136 23-86 (162)
349 1dp3_A TRAM protein; helix-loo 34.0 19 0.00065 19.4 1.3 40 235-274 6-45 (55)
350 3t8k_A Uncharacterized protein 34.0 59 0.002 22.7 4.4 155 13-183 12-180 (186)
351 2rg8_A Programmed cell death p 33.2 1.2E+02 0.004 20.9 6.1 25 157-181 13-37 (165)
352 4b4t_S RPN3, 26S proteasome re 31.9 2.3E+02 0.008 23.9 15.4 65 84-148 231-299 (523)
353 2etb_A Transient receptor pote 31.7 90 0.0031 22.8 5.4 30 9-38 4-33 (256)
354 3twr_A Tankyrase-2; ankyrin re 30.1 47 0.0016 22.2 3.4 13 15-27 16-28 (165)
355 2keb_A DNA polymerase subunit 30.0 1E+02 0.0035 19.1 6.1 30 104-133 29-58 (101)
356 3aji_A 26S proteasome non-ATPa 29.9 1.5E+02 0.0051 21.0 7.5 11 202-212 148-158 (231)
357 3ljn_A Hypothetical protein; a 29.3 78 0.0027 24.8 4.9 211 9-250 22-266 (364)
358 3qil_A Clathrin heavy chain 1; 29.0 87 0.003 20.4 4.0 47 126-175 39-85 (125)
359 3t5v_B Nuclear mRNA export pro 28.9 2.4E+02 0.0081 23.4 7.6 87 62-148 139-249 (455)
360 3l6a_A Eukaryotic translation 28.9 2.2E+02 0.0076 22.7 16.7 76 6-94 14-93 (364)
361 1wxp_A THO complex subunit 1; 28.5 1E+02 0.0036 19.4 4.4 51 238-290 54-104 (110)
362 4g8k_A 2-5A-dependent ribonucl 28.4 2E+02 0.0068 22.0 8.4 21 8-28 26-46 (337)
363 3qil_A Clathrin heavy chain 1; 28.3 45 0.0015 21.7 2.6 53 86-141 34-86 (125)
364 1uzc_A Hypothetical protein FL 28.2 88 0.003 18.0 3.6 54 19-76 13-66 (71)
365 3lpz_A GET4 (YOR164C homolog); 28.0 2.2E+02 0.0076 22.4 23.6 134 41-204 37-181 (336)
366 3ygs_P Procaspase 9; apoptosis 26.7 1.1E+02 0.0039 18.6 5.4 14 206-219 53-66 (97)
367 1n11_A Ankyrin; clathrin, BAND 26.3 1.1E+02 0.0037 24.7 5.4 35 71-105 29-65 (437)
368 2p22_A Suppressor protein STP2 25.5 1.7E+02 0.006 20.4 6.9 48 38-96 110-157 (174)
369 3e3v_A Regulatory protein RECX 25.0 1.8E+02 0.006 20.3 10.5 113 66-181 50-164 (177)
370 3rjo_A Endoplasmic reticulum a 24.7 2.8E+02 0.0096 22.4 18.2 162 123-290 201-374 (419)
371 2rfa_A Transient receptor pote 24.3 1.9E+02 0.0065 20.4 7.5 86 197-288 125-222 (232)
372 2f6m_A Suppressor protein STP2 24.2 1E+02 0.0036 17.3 6.4 46 5-51 3-48 (65)
373 3ctd_A Putative ATPase, AAA fa 24.0 2.1E+02 0.0071 20.7 10.7 55 62-116 48-107 (213)
374 2dzn_A Probable 26S proteasome 23.6 57 0.002 23.2 2.9 19 11-29 6-24 (228)
375 3b7b_A Euchromatic histone-lys 23.3 1.4E+02 0.0048 21.3 5.1 197 71-288 26-235 (237)
376 4b4t_O 26S proteasome regulato 23.2 2.9E+02 0.01 22.2 7.8 88 89-176 81-191 (393)
377 3utm_A Tankyrase-1; tankyrase, 22.8 2.5E+02 0.0087 21.3 9.6 110 10-142 27-144 (351)
378 2fv2_A RCD1 required for cell 22.1 2.1E+02 0.007 21.6 5.4 48 239-286 187-235 (268)
379 2qfz_A TBC1 domain family memb 22.0 2.5E+02 0.0086 21.9 6.5 79 140-219 230-315 (345)
380 3t5v_B Nuclear mRNA export pro 21.6 3.3E+02 0.011 22.5 7.2 65 5-78 177-249 (455)
381 3m6y_A 4-hydroxy-2-oxoglutarat 21.4 1.7E+02 0.0058 21.8 4.7 84 64-147 169-269 (275)
382 3qye_A TBC1 domain family memb 21.0 2.9E+02 0.01 21.4 10.5 131 99-239 164-308 (331)
383 3d5l_A Regulatory protein RECX 20.7 2.5E+02 0.0085 20.4 11.6 51 100-151 92-142 (221)
384 3r88_A Anthranilate phosphorib 20.6 2.9E+02 0.0098 22.2 6.5 73 223-296 21-95 (377)
385 3l6a_A Eukaryotic translation 20.3 3.3E+02 0.011 21.7 10.5 61 121-185 14-79 (364)
No 1
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=100.00 E-value=4.8e-36 Score=251.29 Aligned_cols=197 Identities=19% Similarity=0.271 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCH
Q 021791 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84 (307)
Q Consensus 5 ~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 84 (307)
.+++.+|.+|++.|++++|+++|++|.+.|++||..||++||.+|++.+....... .+.+++|.++|++|...|+.||.
T Consensus 27 ~~l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~-~~~l~~A~~lf~~M~~~G~~Pd~ 105 (501)
T 4g26_A 27 ALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSP-NPGLSRGFDIFKQMIVDKVVPNE 105 (501)
T ss_dssp HHHHHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSC-CHHHHHHHHHHHHHHHTTCCCCH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhh-cchHHHHHHHHHHHHHhCCCCCH
Confidence 46888999999999999999999999999999999999999999998766544332 57889999999999999999999
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHH
Q 021791 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164 (307)
Q Consensus 85 ~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (307)
.||++||.+|++.|++++|.++|++|.+.|+.||..+|+.+|.+|++.|++++|.++|++|.+.|+.||..+|+.||.+|
T Consensus 106 ~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~ 185 (501)
T 4g26_A 106 ATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVS 185 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhc
Q 021791 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL 203 (307)
Q Consensus 165 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 203 (307)
++.|+.++|.+++++|.+.+. .|+..||+.++..|...
T Consensus 186 ~~~g~~d~A~~ll~~Mr~~g~-~ps~~T~~~l~~~F~s~ 223 (501)
T 4g26_A 186 MDTKNADKVYKTLQRLRDLVR-QVSKSTFDMIEEWFKSE 223 (501)
T ss_dssp HHTTCHHHHHHHHHHHHHHTS-SBCHHHHHHHHHHHHSH
T ss_pred hhCCCHHHHHHHHHHHHHhCC-CcCHHHHHHHHHHHhcC
Confidence 999999999999999999997 99999999999998864
No 2
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=100.00 E-value=4.9e-36 Score=251.23 Aligned_cols=208 Identities=13% Similarity=0.150 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHhcCCCCCH-HHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCC---------h
Q 021791 66 RNAEKVFDEMRVRGIEPDV-TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR---------I 135 (307)
Q Consensus 66 ~~a~~~~~~~~~~~~~~~~-~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~---------~ 135 (307)
..+..+.+++.+.+..+.+ ..++.+|.+|++.|++++|+++|++|.+.|+.||..||+.||.+|++.+. +
T Consensus 7 s~~e~L~~~~~~k~~~~spe~~l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l 86 (501)
T 4g26_A 7 SPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGL 86 (501)
T ss_dssp -----------------CHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHH
T ss_pred chHHHHHHHHHHhcccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchH
Confidence 4456666777777765544 46889999999999999999999999999999999999999999997765 6
Q ss_pred HHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHH
Q 021791 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNH 215 (307)
Q Consensus 136 ~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~ 215 (307)
+.|.++|++|...|+.||..+|+.+|.+|++.|++++|.++|++|.+.+. .||..+|+.+|.+|++.|++++|.++|++
T Consensus 87 ~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~-~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~ 165 (501)
T 4g26_A 87 SRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGI-QPRLRSYGPALFGFCRKGDADKAYEVDAH 165 (501)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCC-CCccceehHHHHHHHHCCCHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999997 99999999999999999999999999999
Q ss_pred HhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhch
Q 021791 216 VKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274 (307)
Q Consensus 216 ~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g 274 (307)
|.+.|+.||..+|+.||.+|++.|++++|.+++++|.+.|..|+..||+.++..|...+
T Consensus 166 M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~T~~~l~~~F~s~~ 224 (501)
T 4g26_A 166 MVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSKSTFDMIEEWFKSEV 224 (501)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCHHHHHHHHHHHHSHH
T ss_pred HHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999887654
No 3
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.97 E-value=9.9e-28 Score=207.60 Aligned_cols=273 Identities=8% Similarity=-0.081 Sum_probs=245.8
Q ss_pred ccHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCC
Q 021791 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE 81 (307)
Q Consensus 2 p~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 81 (307)
+|+.+|+.++..|.+.|++++|.++|+++.+.+ +.+..++..++.++.+ .|++++|.++++++.+.. +
T Consensus 303 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~----------~g~~~~A~~~~~~~~~~~-~ 370 (597)
T 2xpi_A 303 KSSDLLLCKADTLFVRSRFIDVLAITTKILEID-PYNLDVYPLHLASLHE----------SGEKNKLYLISNDLVDRH-P 370 (597)
T ss_dssp GCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCCTTHHHHHHHHHH----------HTCHHHHHHHHHHHHHHC-T
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcC-cccHHHHHHHHHHHHH----------hCCHHHHHHHHHHHHhhC-c
Confidence 578999999999999999999999999998775 3377889999999999 888999999999998663 5
Q ss_pred CCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHH
Q 021791 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161 (307)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 161 (307)
.+..+++.++..|.+.|++++|.++|+++.+... .+..+|+.++.+|.+.|++++|.++|+++.+.+. .+..+|+.++
T Consensus 371 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~~l~ 448 (597)
T 2xpi_A 371 EKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDP-QFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQ-GTHLPYLFLG 448 (597)
T ss_dssp TSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTT-TCSHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-cchHHHHHHH
Confidence 5788999999999999999999999999988643 3688999999999999999999999999998754 3788999999
Q ss_pred HHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhC----CCCCC--HHhHHHHHHHH
Q 021791 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS----ELGLD--LDSYTMLIHGL 235 (307)
Q Consensus 162 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~----~~~~~--~~~~~~li~~~ 235 (307)
.+|.+.|++++|.++|+++.+.. +.+..+|+.++..|.+.|++++|.++|+++.+. +..|+ ..+|..++.+|
T Consensus 449 ~~~~~~g~~~~A~~~~~~~~~~~--~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~ 526 (597)
T 2xpi_A 449 MQHMQLGNILLANEYLQSSYALF--QYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAY 526 (597)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHH
Confidence 99999999999999999999875 668899999999999999999999999999875 56777 78999999999
Q ss_pred HccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhhcCC
Q 021791 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291 (307)
Q Consensus 236 ~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~~ 291 (307)
.+.|++++|..+|+++.+.+ +.+..+|..+..+|...|++++|.+.++++.+...
T Consensus 527 ~~~g~~~~A~~~~~~~~~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p 581 (597)
T 2xpi_A 527 RKLKMYDAAIDALNQGLLLS-TNDANVHTAIALVYLHKKIPGLAITHLHESLAISP 581 (597)
T ss_dssp HHTTCHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHhcCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Confidence 99999999999999999875 44788999999999999999999999999877543
No 4
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.96 E-value=4.2e-27 Score=203.69 Aligned_cols=271 Identities=13% Similarity=0.015 Sum_probs=183.3
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHH------------------------------------
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLL------------------------------------ 46 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll------------------------------------ 46 (307)
++.+|+.++.+|.+.|++++|.++|++|.+.+.. +...+..+.
T Consensus 199 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~-~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 277 (597)
T 2xpi_A 199 EASMCYLRGQVYTNLSNFDRAKECYKEALMVDAK-CYEAFDQLVSNHLLTADEEWDLVLKLNYSTYSKEDAAFLRSLYML 277 (597)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHTTCSCHHHHHHHHHHSCTHHHHGGGHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCch-hhHHHHHHHHhhcccchhHHHHHHhcCCcccccchHHHHHHHHHH
Confidence 5789999999999999999999999999876321 233333322
Q ss_pred --HHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCC---------
Q 021791 47 --NGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI--------- 115 (307)
Q Consensus 47 --~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~--------- 115 (307)
..|.+ .|++++|.++|+++.+. +++..+++.++.+|.+.|++++|.++|+++.+.+.
T Consensus 278 ~~~~~~~----------~g~~~~A~~~~~~~~~~--~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l 345 (597)
T 2xpi_A 278 KLNKTSH----------EDELRRAEDYLSSINGL--EKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLH 345 (597)
T ss_dssp TSCTTTT----------HHHHHHHHHHHHTSTTG--GGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHH
T ss_pred HHHHHcC----------cchHHHHHHHHHHhhcC--CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHH
Confidence 12222 66777777777776654 46777777777777777777777777777765432
Q ss_pred ------------------------CCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChh
Q 021791 116 ------------------------CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171 (307)
Q Consensus 116 ------------------------~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 171 (307)
+.+..+++.++..|.+.|++++|.++|+++.+... .+..+|+.++..|.+.|+++
T Consensus 346 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~ 424 (597)
T 2xpi_A 346 LASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDP-QFGPAWIGFAHSFAIEGEHD 424 (597)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHH
Confidence 22455566666666666666666666666665432 24566666667777777777
Q ss_pred HHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHH
Q 021791 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251 (307)
Q Consensus 172 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~ 251 (307)
+|.++|+++.+.. +.+..+|..++.+|.+.|++++|.++|+.+.+.. +.+..+|+.++..|.+.|++++|..+|+++
T Consensus 425 ~A~~~~~~~~~~~--~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 501 (597)
T 2xpi_A 425 QAISAYTTAARLF--QGTHLPYLFLGMQHMQLGNILLANEYLQSSYALF-QYDPLLLNELGVVAFNKSDMQTAINHFQNA 501 (597)
T ss_dssp HHHHHHHHHHHTT--TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC--ccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 7777777666554 4566667777777777777777777777766553 235667777777777777777777777777
Q ss_pred HHc----CCCCc--HhhHHHHHHHHhhchhHHHHHHHHHHhhhcC
Q 021791 252 IEK----GLLPQ--KVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290 (307)
Q Consensus 252 ~~~----~~~p~--~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~ 290 (307)
.+. +..|+ ..+|..+..+|.+.|++++|.++++++.+.+
T Consensus 502 ~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 546 (597)
T 2xpi_A 502 LLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS 546 (597)
T ss_dssp HHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 665 55666 5677777777777777777777777766544
No 5
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.93 E-value=2.2e-22 Score=165.14 Aligned_cols=279 Identities=12% Similarity=0.021 Sum_probs=178.8
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhh---------------------
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF--------------------- 61 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~--------------------- 61 (307)
+..+|..+...+.+.|++++|.+.|+++.+.. +.+..+|..+..++...|++..+...
T Consensus 66 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 144 (388)
T 1w3b_A 66 LAEAYSNLGNVYKERGQLQEAIEHYRHALRLK-PDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNL 144 (388)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHcC-cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 45677788888888888888888888877652 22445677777777775554433221
Q ss_pred ---HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHH
Q 021791 62 ---EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138 (307)
Q Consensus 62 ---~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a 138 (307)
.|++++|.+.|+++.+.. +.+..+|..+...+...|++++|...|+++.+.+.. +...+..+...+...|++++|
T Consensus 145 ~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A 222 (388)
T 1w3b_A 145 LKALGRLEEAKACYLKAIETQ-PNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPN-FLDAYINLGNVLKEARIFDRA 222 (388)
T ss_dssp HHTTSCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCTTHH
T ss_pred HHHccCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-cHHHHHHHHHHHHHcCCHHHH
Confidence 245555666666655542 224555666666666666666666666666555322 445556666666666666666
Q ss_pred HHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhh
Q 021791 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218 (307)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~ 218 (307)
...+++.....+. +..++..+...+...|++++|...++++.+.. +.+..++..+...+.+.|++++|.+.++.+.+
T Consensus 223 ~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 299 (388)
T 1w3b_A 223 VAAYLRALSLSPN-HAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ--PHFPDAYCNLANALKEKGSVAEAEDCYNTALR 299 (388)
T ss_dssp HHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC--SSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 6666666554322 45666667777777777777777777776654 44556677777777777777777777777766
Q ss_pred CCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhhc
Q 021791 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289 (307)
Q Consensus 219 ~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~ 289 (307)
.. +.+..++..+...+...|++++|...++++.+. .+.+..++..+...+.+.|++++|...++++.+.
T Consensus 300 ~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 368 (388)
T 1w3b_A 300 LC-PTHADSLNNLANIKREQGNIEEAVRLYRKALEV-FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI 368 (388)
T ss_dssp HC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTS-CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTT
T ss_pred hC-cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 53 336667777777777777777777777777654 2334556677777777777777777777776653
No 6
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.93 E-value=3.5e-22 Score=163.86 Aligned_cols=250 Identities=12% Similarity=0.020 Sum_probs=202.6
Q ss_pred HHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHH
Q 021791 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVT 85 (307)
Q Consensus 6 ~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 85 (307)
.+..+...+...|++++|.+.|+++.+.. +-+..+|..+...+.. .|++++|...|+++.+.+ +.+..
T Consensus 137 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~----------~g~~~~A~~~~~~al~~~-p~~~~ 204 (388)
T 1w3b_A 137 VRSDLGNLLKALGRLEEAKACYLKAIETQ-PNFAVAWSNLGCVFNA----------QGEIWLAIHHFEKAVTLD-PNFLD 204 (388)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHT----------TTCHHHHHHHHHHHHHHC-TTCHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHhcC-CCcHH
Confidence 44445555555666666666666665542 1234566666666666 778899999999999874 34678
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHh
Q 021791 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR 165 (307)
Q Consensus 86 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (307)
.+..+...+...|++++|...+++..+.... +..++..+...|.+.|++++|...|+++.+.+.. +..++..+...+.
T Consensus 205 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~ 282 (388)
T 1w3b_A 205 AYINLGNVLKEARIFDRAVAAYLRALSLSPN-HAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNLANALK 282 (388)
T ss_dssp HHHHHHHHHHTTTCTTHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHH
Confidence 8999999999999999999999999887533 6788999999999999999999999999987543 6788999999999
Q ss_pred cCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHH
Q 021791 166 GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245 (307)
Q Consensus 166 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~ 245 (307)
+.|++++|...++++.+.. +.+..++..+...+...|++++|.+.++++.+.. +.+..++..+..++.+.|++++|.
T Consensus 283 ~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~ 359 (388)
T 1w3b_A 283 EKGSVAEAEDCYNTALRLC--PTHADSLNNLANIKREQGNIEEAVRLYRKALEVF-PEFAAAHSNLASVLQQQGKLQEAL 359 (388)
T ss_dssp HHSCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSC-TTCHHHHHHHHHHHHTTTCCHHHH
T ss_pred HcCCHHHHHHHHHHHHhhC--cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHcCCHHHHH
Confidence 9999999999999999885 6788999999999999999999999999998863 346788999999999999999999
Q ss_pred HHHHHHHHcCCCCc-HhhHHHHHHHHhhch
Q 021791 246 QYFVEMIEKGLLPQ-KVTFETLYRGLIQSD 274 (307)
Q Consensus 246 ~~~~~~~~~~~~p~-~~~~~~l~~~~~~~g 274 (307)
..|+++++. .|+ ...+..+...+...|
T Consensus 360 ~~~~~a~~~--~p~~~~a~~~lg~~~~~~~ 387 (388)
T 1w3b_A 360 MHYKEAIRI--SPTFADAYSNMGNTLKEMQ 387 (388)
T ss_dssp HHHHHHHTT--CTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhh--CCCCHHHHHhHHHHHHHcc
Confidence 999999964 443 445555555554433
No 7
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.91 E-value=3.3e-21 Score=161.03 Aligned_cols=268 Identities=10% Similarity=0.003 Sum_probs=143.0
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCC
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 82 (307)
++..|..+...+.+.|++++|.++|+++.+.. +.+...|..+..++.. .|++++|...|+++.+.+ +.
T Consensus 25 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~l~~~~~~----------~g~~~~A~~~~~~al~~~-p~ 92 (450)
T 2y4t_A 25 DVEKHLELGKKLLAAGQLADALSQFHAAVDGD-PDNYIAYYRRATVFLA----------MGKSKAALPDLTKVIQLK-MD 92 (450)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHC-TT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHH----------CCCHHHHHHHHHHHHhcC-CC
Confidence 45666777777777777777777777776542 3356666667767766 555566666666665553 22
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCC----------------------------------------------
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC---------------------------------------------- 116 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~---------------------------------------------- 116 (307)
+...+..+..++.+.|++++|.+.|+.+.+....
T Consensus 93 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 172 (450)
T 2y4t_A 93 FTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEV 172 (450)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4555556666666666666666666665554221
Q ss_pred --CchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHH
Q 021791 117 --PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194 (307)
Q Consensus 117 --~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 194 (307)
.+..++..+..+|.+.|++++|..+|+++..... .+..++..+...|...|++++|...|+++.... +.+...+.
T Consensus 173 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--p~~~~~~~ 249 (450)
T 2y4t_A 173 CVWDAELRELRAECFIKEGEPRKAISDLKAASKLKN-DNTEAFYKISTLYYQLGDHELSLSEVRECLKLD--QDHKRCFA 249 (450)
T ss_dssp CTTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHC-SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHH
T ss_pred CCCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CChHHHHH
Confidence 1333344444444444444444444444443321 134444445555555555555555555544432 22233333
Q ss_pred HH------------HHHHHhcCcHHHHHHHHHHHhhCCCCCC-----HHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCC
Q 021791 195 IL------------IGMFMALNRMDMVREIWNHVKGSELGLD-----LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL 257 (307)
Q Consensus 195 ~l------------~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~ 257 (307)
.+ ...+...|++++|...++.+... .|+ ...+..+..++.+.|++++|...++++.+.. +
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~--~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~-p 326 (450)
T 2y4t_A 250 HYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKT--EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQME-P 326 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-T
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-c
Confidence 22 44455555555555555555443 222 2245555555556666666666666655441 2
Q ss_pred CcHhhHHHHHHHHhhchhHHHHHHHHHHhhh
Q 021791 258 PQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288 (307)
Q Consensus 258 p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~ 288 (307)
.+..++..+..+|...|++++|...+++..+
T Consensus 327 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 327 DNVNALKDRAEAYLIEEMYDEAIQDYETAQE 357 (450)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 2455556666666666666666666666554
No 8
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.91 E-value=5.6e-21 Score=159.66 Aligned_cols=261 Identities=10% Similarity=0.029 Sum_probs=200.0
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchh----------------------
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER---------------------- 60 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~---------------------- 60 (307)
+..+|..+..++...|++++|.+.|+++.+.+ +.+...+..+..++...|++..+..
T Consensus 59 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l 137 (450)
T 2y4t_A 59 NYIAYYRRATVFLAMGKSKAALPDLTKVIQLK-MDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQL 137 (450)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHH
Confidence 46677777777888888888888888777663 2245677777777777554322111
Q ss_pred -----------------hHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHH
Q 021791 61 -----------------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123 (307)
Q Consensus 61 -----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 123 (307)
..|++++|...|+++.+.. +.+...+..+..++...|++++|.+.|+.+.+... .+..++.
T Consensus 138 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~ 215 (450)
T 2y4t_A 138 IKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVC-VWDAELRELRAECFIKEGEPRKAISDLKAASKLKN-DNTEAFY 215 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHC-SCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC-CCHHHHH
Confidence 1345566777777776653 34677888889999999999999999999987643 4788999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHH------------HHHHhcCCChhHHHHHHHHHhhcCCCCcc--
Q 021791 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF------------FKEYRGRKDANGAMKLYRQMKEDDLCVPN-- 189 (307)
Q Consensus 124 ~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l------------~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-- 189 (307)
.+...|...|++++|...|+++...... +...+..+ ...+...|++++|...|+++.... +.+
T Consensus 216 ~l~~~~~~~g~~~~A~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~--p~~~~ 292 (450)
T 2y4t_A 216 KISTLYYQLGDHELSLSEVRECLKLDQD-HKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTE--PSIAE 292 (450)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--CSSHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--CcchH
Confidence 9999999999999999999999876432 45555555 788999999999999999999874 223
Q ss_pred --HHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCc-HhhHHHH
Q 021791 190 --IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ-KVTFETL 266 (307)
Q Consensus 190 --~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~-~~~~~~l 266 (307)
...+..+...+.+.|++++|...++.+.... +.+...|..+..+|...|++++|...++++++. .|+ ...+..+
T Consensus 293 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~-p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~l 369 (450)
T 2y4t_A 293 YTVRSKERICHCFSKDEKPVEAIRVCSEVLQME-PDNVNALKDRAEAYLIEEMYDEAIQDYETAQEH--NENDQQIREGL 369 (450)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--SSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--CcchHHHHHHH
Confidence 4578889999999999999999999988763 337889999999999999999999999999974 455 4444444
Q ss_pred HHHHhh
Q 021791 267 YRGLIQ 272 (307)
Q Consensus 267 ~~~~~~ 272 (307)
..+...
T Consensus 370 ~~~~~~ 375 (450)
T 2y4t_A 370 EKAQRL 375 (450)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444333
No 9
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.89 E-value=3.6e-20 Score=148.23 Aligned_cols=271 Identities=8% Similarity=-0.077 Sum_probs=232.2
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCC
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 82 (307)
++..+..+...+...|++++|.++|+++.+.. +.+...+..+..++.. .|++++|...++++.+.. +.
T Consensus 21 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~~~~~~~~----------~~~~~~A~~~~~~~~~~~-~~ 88 (330)
T 3hym_B 21 NLDVVVSLAERHYYNCDFKMCYKLTSVVMEKD-PFHASCLPVHIGTLVE----------LNKANELFYLSHKLVDLY-PS 88 (330)
T ss_dssp CCTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTTTHHHHHHHHHH----------HTCHHHHHHHHHHHHHHC-TT
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCChhhHHHHHHHHHH----------hhhHHHHHHHHHHHHHhC-cC
Confidence 45567778889999999999999999998773 3355667777788888 888999999999998874 44
Q ss_pred CHHHHHHHHHHHHhcC-CchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHH
Q 021791 83 DVTSFSIVLHVYSRAH-KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 161 (307)
+...+..+...+...| ++++|.+.++...+.... +...+..+...+...|++++|...++++.+.... +...+..+.
T Consensus 89 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~ 166 (330)
T 3hym_B 89 NPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKT-YGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIG 166 (330)
T ss_dssp STHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTT-CTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHH
Confidence 6788999999999999 999999999999887533 6788999999999999999999999999887543 566777799
Q ss_pred HHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCC--------CCCCHHhHHHHHH
Q 021791 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE--------LGLDLDSYTMLIH 233 (307)
Q Consensus 162 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~--------~~~~~~~~~~li~ 233 (307)
..+...|++++|...+++..... +.+..++..+...+...|++++|...++.+.... .+....++..+..
T Consensus 167 ~~~~~~~~~~~A~~~~~~al~~~--~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~ 244 (330)
T 3hym_B 167 LEYGLTNNSKLAERFFSQALSIA--PEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGH 244 (330)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHH
Confidence 99999999999999999999886 6678899999999999999999999999887642 1334678999999
Q ss_pred HHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhhcC
Q 021791 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290 (307)
Q Consensus 234 ~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~ 290 (307)
++...|++++|...+++..+.. +.+...+..+...+...|++++|.+.+++..+..
T Consensus 245 ~~~~~g~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 300 (330)
T 3hym_B 245 VCRKLKKYAEALDYHRQALVLI-PQNASTYSAIGYIHSLMGNFENAVDYFHTALGLR 300 (330)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHS-TTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTC
T ss_pred HHHHhcCHHHHHHHHHHHHhhC-ccchHHHHHHHHHHHHhccHHHHHHHHHHHHccC
Confidence 9999999999999999999863 3456788899999999999999999999987654
No 10
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.88 E-value=1.6e-20 Score=152.69 Aligned_cols=267 Identities=10% Similarity=-0.001 Sum_probs=219.5
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCC
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 82 (307)
++..|..+...+.+.|++++|.+.|+++.+.. +.+..+|..+..++.. .|++++|...|+++.+.. +.
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~----------~g~~~~A~~~~~~al~~~-p~ 131 (365)
T 4eqf_A 64 DWPGAFEEGLKRLKEGDLPVTILFMEAAILQD-PGDAEAWQFLGITQAE----------NENEQAAIVALQRCLELQ-PN 131 (365)
T ss_dssp TCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHC-TT
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-cCCHHHHHHHHHHHHH----------CCCHHHHHHHHHHHHhcC-CC
Confidence 34568888999999999999999999998873 3467889999999999 888999999999998874 44
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCc----------hhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCC-
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT----------VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS- 151 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~----------~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~- 151 (307)
+..++..+..++...|++++|.+.++++.+.... + ...+..+...+...|++++|...++++......
T Consensus 132 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 210 (365)
T 4eqf_A 132 NLKALMALAVSYTNTSHQQDACEALKNWIKQNPK-YKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDM 210 (365)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHCC-------------------CCHHHHHHHHHHHHHHHHSCSS
T ss_pred CHHHHHHHHHHHHccccHHHHHHHHHHHHHhCcc-chHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCc
Confidence 6889999999999999999999999999876321 2 223344588899999999999999999987433
Q ss_pred CCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHH
Q 021791 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTML 231 (307)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l 231 (307)
++..++..+...+...|++++|...+++..+.. +.+..++..+..++...|++++|...++.+.... +.+..++..+
T Consensus 211 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l 287 (365)
T 4eqf_A 211 IDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVR--PEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQ-PGFIRSRYNL 287 (365)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCchHHHHHH
Confidence 267899999999999999999999999999875 6678899999999999999999999999998864 2368889999
Q ss_pred HHHHHccCcHHHHHHHHHHHHHcCC---C--------CcHhhHHHHHHHHhhchhHHHHHHHHHH
Q 021791 232 IHGLCEKQKWKEACQYFVEMIEKGL---L--------PQKVTFETLYRGLIQSDMLRTWRRLKKK 285 (307)
Q Consensus 232 i~~~~~~g~~~~a~~~~~~~~~~~~---~--------p~~~~~~~l~~~~~~~g~~~~a~~~~~~ 285 (307)
..+|...|++++|...|+++++..- . .+...+..+..++...|+.+.+..+.++
T Consensus 288 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~ 352 (365)
T 4eqf_A 288 GISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPELFQAANLG 352 (365)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHHHHHHHHTT
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHHHHHHHHHh
Confidence 9999999999999999999987521 0 1356788999999999999998887665
No 11
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.88 E-value=6.7e-20 Score=146.48 Aligned_cols=267 Identities=9% Similarity=-0.025 Sum_probs=223.7
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCC
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 82 (307)
+...|..+...+...|++++|..+|+++.+.. +.+...+..+..++.. .|++++|.+.++++.+.. +.
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~----------~~~~~~A~~~~~~a~~~~-~~ 87 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAA-PEREEAWRSLGLTQAE----------NEKDGLAIIALNHARMLD-PK 87 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHC-TT
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHhcC-cC
Confidence 34556778889999999999999999998873 3367788888888888 788999999999998874 44
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHH--------------HH-HHHhcCChHHHHHHHHHHHh
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSV--------------VK-CLCSCGRIEDAEELLGEMVR 147 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l--------------l~-~~~~~~~~~~a~~~~~~~~~ 147 (307)
+..++..+...+...|++++|.+.++.+.+.... +...+..+ .. .+...|++++|...++++.+
T Consensus 88 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 166 (327)
T 3cv0_A 88 DIAVHAALAVSHTNEHNANAALASLRAWLLSQPQ-YEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALE 166 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTT-TTTC--------------------CCTTSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHh
Confidence 7889999999999999999999999999887433 33344333 22 37788999999999999988
Q ss_pred CCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHh
Q 021791 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS 227 (307)
Q Consensus 148 ~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 227 (307)
.... +...+..+...+...|++++|...+++..... +.+..++..+...+...|++++|...++.+.... +.+...
T Consensus 167 ~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~ 242 (327)
T 3cv0_A 167 MNPN-DAQLHASLGVLYNLSNNYDSAAANLRRAVELR--PDDAQLWNKLGATLANGNRPQEALDAYNRALDIN-PGYVRV 242 (327)
T ss_dssp HSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred hCCC-CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCCHHH
Confidence 7543 78899999999999999999999999998875 5678899999999999999999999999988764 336788
Q ss_pred HHHHHHHHHccCcHHHHHHHHHHHHHcCCCC-----------cHhhHHHHHHHHhhchhHHHHHHHHHHh
Q 021791 228 YTMLIHGLCEKQKWKEACQYFVEMIEKGLLP-----------QKVTFETLYRGLIQSDMLRTWRRLKKKL 286 (307)
Q Consensus 228 ~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p-----------~~~~~~~l~~~~~~~g~~~~a~~~~~~~ 286 (307)
+..+..++...|++++|...++++.+..... +..++..+..++...|+.++|..++++.
T Consensus 243 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 312 (327)
T 3cv0_A 243 MYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYAQN 312 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999999999999998763221 4678889999999999999999998764
No 12
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.87 E-value=5.9e-20 Score=149.38 Aligned_cols=267 Identities=9% Similarity=-0.012 Sum_probs=223.3
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCC
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 82 (307)
+...+..+...+...|++++|...|+++.+.. +.+...+..+..++.. .|++++|...|+++.+.. +.
T Consensus 63 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~----------~g~~~~A~~~~~~al~~~-~~ 130 (368)
T 1fch_A 63 DHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQD-PKHMEAWQYLGTTQAE----------NEQELLAISALRRCLELK-PD 130 (368)
T ss_dssp TCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSC-TTCHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHC-TT
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHH----------CcCHHHHHHHHHHHHhcC-CC
Confidence 34567788999999999999999999999873 3467788888889998 888999999999998874 44
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHH---------------HHHHHHhcCChHHHHHHHHHHHh
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS---------------VVKCLCSCGRIEDAEELLGEMVR 147 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~---------------ll~~~~~~~~~~~a~~~~~~~~~ 147 (307)
+..++..+...+...|++++|.+.++.+.+.... +...+.. .+..+...|++++|...++++..
T Consensus 131 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 209 (368)
T 1fch_A 131 NQTALMALAVSFTNESLQRQACEILRDWLRYTPA-YAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVR 209 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTT-TGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHH
Confidence 7889999999999999999999999999887543 2222221 23344489999999999999988
Q ss_pred CCCCC-CHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHH
Q 021791 148 NGVSP-SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226 (307)
Q Consensus 148 ~~~~~-~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 226 (307)
..... +..++..+...+...|++++|...+++..... +.+..++..+...+...|++++|...++.+.... +.+..
T Consensus 210 ~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-~~~~~ 286 (368)
T 1fch_A 210 LDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVR--PNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ-PGYIR 286 (368)
T ss_dssp HSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHH
T ss_pred hCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHH
Confidence 64332 57889999999999999999999999998875 5678899999999999999999999999998764 33678
Q ss_pred hHHHHHHHHHccCcHHHHHHHHHHHHHcCCCC----------cHhhHHHHHHHHhhchhHHHHHHHHHH
Q 021791 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP----------QKVTFETLYRGLIQSDMLRTWRRLKKK 285 (307)
Q Consensus 227 ~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p----------~~~~~~~l~~~~~~~g~~~~a~~~~~~ 285 (307)
.+..+..+|...|++++|...|+++.+..... ...+|..+..++...|+.++|..++++
T Consensus 287 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 355 (368)
T 1fch_A 287 SRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADAR 355 (368)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHHHHTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHHHhHHH
Confidence 89999999999999999999999998752111 157899999999999999999988764
No 13
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.87 E-value=2.8e-18 Score=138.74 Aligned_cols=270 Identities=11% Similarity=0.002 Sum_probs=135.4
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCC
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 82 (307)
|+..+..+...+...|++++|.+.|+++.+.. +.+...+..+..++.. .|++++|...++++.+.. +.
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~~a~~~~~----------~~~~~~A~~~~~~~~~~~-~~ 69 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGD-PDNYIAYYRRATVFLA----------MGKSKAALPDLTKVIALK-MD 69 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHC-TT
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-cccHHHHHHHHHHHHH----------ccCHHHHHHHHHHHHHhC-CC
Confidence 34555555666666666666666666655542 2234455555555555 444555555555554432 22
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCC-----------------------------------------------
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI----------------------------------------------- 115 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~----------------------------------------------- 115 (307)
+...+..+...+...|++++|...++.+.+...
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 149 (359)
T 3ieg_A 70 FTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEV 149 (359)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 344445555555555555555555555444321
Q ss_pred -CCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHH
Q 021791 116 -CPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN 194 (307)
Q Consensus 116 -~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 194 (307)
+.+..++..+...+...|++++|...++++..... .+..++..+...+...|++++|...+++..+.. +.+...+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~ 226 (359)
T 3ieg_A 150 CVWDAELRELRAECFIKEGEPRKAISDLKAASKLKS-DNTEAFYKISTLYYQLGDHELSLSEVRECLKLD--QDHKRCFA 226 (359)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCS-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TTCHHHHH
T ss_pred CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--ccchHHHH
Confidence 11344444444445555555555555555444322 134444455555555555555555555554442 22222222
Q ss_pred H------------HHHHHHhcCcHHHHHHHHHHHhhCCCCCCH----HhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCC
Q 021791 195 I------------LIGMFMALNRMDMVREIWNHVKGSELGLDL----DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258 (307)
Q Consensus 195 ~------------l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~----~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p 258 (307)
. +...+...|++++|...++.+...... +. ..+..+..++...|++++|...+++..+.. +.
T Consensus 227 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~ 304 (359)
T 3ieg_A 227 HYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQME-PD 304 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-cc
Confidence 1 133445555555555555555543211 22 123334555666666666666666666542 23
Q ss_pred cHhhHHHHHHHHhhchhHHHHHHHHHHhhhc
Q 021791 259 QKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289 (307)
Q Consensus 259 ~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~ 289 (307)
+..++..+...+...|++++|.+.+++..+.
T Consensus 305 ~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~ 335 (359)
T 3ieg_A 305 NVNALKDRAEAYLIEEMYDEAIQDYEAAQEH 335 (359)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 4556666666666666666666666666544
No 14
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.86 E-value=4.9e-18 Score=137.28 Aligned_cols=263 Identities=11% Similarity=0.024 Sum_probs=196.4
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchh----------------------
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNER---------------------- 60 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~---------------------- 60 (307)
++.+|..+...+...|++++|...|+++.+.. +-+...+..+...+...|++..+..
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l 114 (359)
T 3ieg_A 36 NYIAYYRRATVFLAMGKSKAALPDLTKVIALK-MDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQL 114 (359)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHH
Confidence 45677778888888888888888888887762 2255677777777777444221100
Q ss_pred -----------------hHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHH
Q 021791 61 -----------------FEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYT 123 (307)
Q Consensus 61 -----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 123 (307)
..|++++|.+.++++.+.. +.+...+..+...+...|++++|...++.+.+... .+..++.
T Consensus 115 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~ 192 (359)
T 3ieg_A 115 VKADEMQRLRSQALDAFDGADYTAAITFLDKILEVC-VWDAELRELRAECFIKEGEPRKAISDLKAASKLKS-DNTEAFY 192 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCS-CCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC-CCHHHHH
Confidence 0344455666666655542 34667788888889999999999999999988753 4788999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHH------------HHHHhcCCChhHHHHHHHHHhhcCCCCccH-
Q 021791 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF------------FKEYRGRKDANGAMKLYRQMKEDDLCVPNI- 190 (307)
Q Consensus 124 ~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l------------~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~- 190 (307)
.+...+...|++++|...+++..+.... +...+..+ ...+.+.|++++|...+++..... +.+.
T Consensus 193 ~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~~~~ 269 (359)
T 3ieg_A 193 KISTLYYQLGDHELSLSEVRECLKLDQD-HKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTE--PSVAE 269 (359)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CSSHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCcc-chHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--CCchH
Confidence 9999999999999999999999886433 44444322 566899999999999999998875 2333
Q ss_pred ---HHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCc-HhhHHHH
Q 021791 191 ---HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ-KVTFETL 266 (307)
Q Consensus 191 ---~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~-~~~~~~l 266 (307)
..+..+...+...|++++|...++...... +.+...+..+..++...|++++|...|++..+. .|+ ...+..+
T Consensus 270 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~--~p~~~~~~~~l 346 (359)
T 3ieg_A 270 YTVRSKERICHCFSKDEKPVEAIRICSEVLQME-PDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEH--NENDQQIREGL 346 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--CTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCCChHHHHHH
Confidence 335567889999999999999999998864 337889999999999999999999999999975 454 4455555
Q ss_pred HHHHhhch
Q 021791 267 YRGLIQSD 274 (307)
Q Consensus 267 ~~~~~~~g 274 (307)
..+....+
T Consensus 347 ~~~~~~~~ 354 (359)
T 3ieg_A 347 EKAQRLLK 354 (359)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55544433
No 15
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.86 E-value=9.2e-19 Score=148.57 Aligned_cols=165 Identities=12% Similarity=0.003 Sum_probs=118.4
Q ss_pred hhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHH
Q 021791 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198 (307)
Q Consensus 119 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (307)
..++..+...+...|++++|...++++...... ...+..+...+...|++++|...+++..... +.+..++..+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~~~--~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~l~~ 312 (514)
T 2gw1_A 237 AISLEHTGIFKFLKNDPLGAHEDIKKAIELFPR--VNSYIYMALIMADRNDSTEYYNYFDKALKLD--SNNSSVYYHRGQ 312 (514)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTC--TTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc--HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcC--cCCHHHHHHHHH
Confidence 345555666666777777777777777665433 6667777777777777777777777777664 456667777777
Q ss_pred HHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHH
Q 021791 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278 (307)
Q Consensus 199 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~ 278 (307)
.+...|++++|...++.+...... +...+..+...+...|++++|...++++.+.. +.+..++..+...+...|++++
T Consensus 313 ~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~ 390 (514)
T 2gw1_A 313 MNFILQNYDQAGKDFDKAKELDPE-NIFPYIQLACLAYRENKFDDCETLFSEAKRKF-PEAPEVPNFFAEILTDKNDFDK 390 (514)
T ss_dssp HHHHTTCTTHHHHHHHHHHHTCSS-CSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHS-TTCSHHHHHHHHHHHHTTCHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHc-ccCHHHHHHHHHHHHHCCCHHH
Confidence 888888888888888887766432 56677777788888888888888888887652 3345667777778888888888
Q ss_pred HHHHHHHhhhc
Q 021791 279 WRRLKKKLDEE 289 (307)
Q Consensus 279 a~~~~~~~~~~ 289 (307)
|...++++.+.
T Consensus 391 A~~~~~~a~~~ 401 (514)
T 2gw1_A 391 ALKQYDLAIEL 401 (514)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 88888777554
No 16
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.86 E-value=1.8e-21 Score=169.13 Aligned_cols=150 Identities=13% Similarity=0.126 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHhcCchhhHHHHHHHHHh---cCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCC
Q 021791 4 VKMYTSLIYGWCKINRIDMAERFLGEMIE---RGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI 80 (307)
Q Consensus 4 ~~~~~~li~~~~~~g~~~~a~~~~~~~~~---~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 80 (307)
..+||++|.+|++.|++++|.++|++|.+ .|+.||..|||+||.+|++ .|++++|.++|++|.+.|+
T Consensus 127 ~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck----------~G~~~eA~~Lf~eM~~~G~ 196 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWAR----------QGAFKELVYVLFMVKDAGL 196 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHh----------CCCHHHHHHHHHHHHHcCC
Confidence 35899999999999999999999988764 5899999999999999999 8899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCC------
Q 021791 81 EPDVTSFSIVLHVYSRAHKP-QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS------ 153 (307)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~-~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~------ 153 (307)
.||..|||++|.++++.|+. ++|.++|++|.+.|+.||..+|+.++..+.+. .+++..+++ .-+..|+
T Consensus 197 ~PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG~~PD~vtY~~ll~~~eR~----~vL~~Vrkv-~P~f~p~~~~~~~ 271 (1134)
T 3spa_A 197 TPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQALFTAVLLSEEDRA----TVLKAVHKV-KPTFSLPPQLPPP 271 (1134)
T ss_dssp CCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHTCCSHHHHHHSCCCHHHHH----HHHHHHGGG-CCCCCCCCCCCCC
T ss_pred CCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCCCChhhcccccChhhHH----HHHHHHHHh-CcccCCCCCCccc
Confidence 99999999999999999985 78999999999999999999999998765554 333333333 2234443
Q ss_pred HhhHHHHHHHHhcCC
Q 021791 154 AETYNCFFKEYRGRK 168 (307)
Q Consensus 154 ~~~~~~l~~~~~~~~ 168 (307)
..+...|.+.|.+.+
T Consensus 272 ~~t~~LL~dl~s~d~ 286 (1134)
T 3spa_A 272 VNTSKLLRDVYAKDG 286 (1134)
T ss_dssp CCCCTTTHHHHCCCS
T ss_pred ccchHHHHHHHccCC
Confidence 445566777777655
No 17
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.83 E-value=4e-18 Score=144.66 Aligned_cols=271 Identities=8% Similarity=-0.065 Sum_probs=226.5
Q ss_pred HHHHHHHHHHHHh---cCchhhHHHHHHHHHh-----cCC--------CCcHHHHHHHHHHHHhhCCCCcchhhHHHHHH
Q 021791 4 VKMYTSLIYGWCK---INRIDMAERFLGEMIE-----RGV--------EPNVVTYNVLLNGVCRRASLHPNERFEKTIRN 67 (307)
Q Consensus 4 ~~~~~~li~~~~~---~g~~~~a~~~~~~~~~-----~~~--------~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 67 (307)
...+......+.. .|++++|...|+++.+ ... +.+...+..+...+.. .|++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 255 (514)
T 2gw1_A 186 ADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL----------KNDPLG 255 (514)
T ss_dssp HHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH----------SSCHHH
T ss_pred HHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH----------CCCHHH
Confidence 4444445555554 8999999999999987 311 2235677778888888 788999
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHh
Q 021791 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVR 147 (307)
Q Consensus 68 a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~ 147 (307)
|...|+++.+.. |+...+..+..++...|++++|...++.+.+... .+..++..+...+...|++++|...++++..
T Consensus 256 A~~~~~~~l~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~ 332 (514)
T 2gw1_A 256 AHEDIKKAIELF--PRVNSYIYMALIMADRNDSTEYYNYFDKALKLDS-NNSSVYYHRGQMNFILQNYDQAGKDFDKAKE 332 (514)
T ss_dssp HHHHHHHHHHHC--CCHHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCT-TCTHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhhC--ccHHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCc-CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999998874 3488899999999999999999999999988753 3677899999999999999999999999998
Q ss_pred CCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCC-CC--
Q 021791 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG-LD-- 224 (307)
Q Consensus 148 ~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~-~~-- 224 (307)
.... +...+..+...+...|++++|...++++.... +.+..++..+...+...|++++|...++.+...... ++
T Consensus 333 ~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 409 (514)
T 2gw1_A 333 LDPE-NIFPYIQLACLAYRENKFDDCETLFSEAKRKF--PEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIY 409 (514)
T ss_dssp TCSS-CSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHS--TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCS
T ss_pred hChh-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHc--ccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHH
Confidence 7544 67788999999999999999999999998875 557788999999999999999999999998764222 11
Q ss_pred --HHhHHHHHHHHHc---cCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhhcCC
Q 021791 225 --LDSYTMLIHGLCE---KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291 (307)
Q Consensus 225 --~~~~~~li~~~~~---~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~~ 291 (307)
...+..+..++.. .|++++|...++++.+.. +.+..++..+...+...|++++|...+++..+...
T Consensus 410 ~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 480 (514)
T 2gw1_A 410 VGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLD-PRSEQAKIGLAQMKLQQEDIDEAITLFEESADLAR 480 (514)
T ss_dssp SCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcc
Confidence 3488999999999 999999999999999863 34567888999999999999999999999876543
No 18
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.83 E-value=1.6e-20 Score=163.34 Aligned_cols=124 Identities=16% Similarity=0.126 Sum_probs=105.5
Q ss_pred CHhhHHHHHHHHhcCCChhHHHHHHHHHhh---cCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHH
Q 021791 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKE---DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229 (307)
Q Consensus 153 ~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 229 (307)
-..||+++|.+|++.|+.++|.++|.+|.+ .+. .||..|||+||.+|++.|++++|.++|++|...|+.||..||+
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~-~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYn 204 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRK-LLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYA 204 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHT-TCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCC-CCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 356899999999999999999999987764 344 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCc-HHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHH
Q 021791 230 MLIHGLCEKQK-WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277 (307)
Q Consensus 230 ~li~~~~~~g~-~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~ 277 (307)
.+|.++++.|+ .++|.++|++|.+.|+.||..+|+.++.++.+.+-++
T Consensus 205 tLI~glcK~G~~~e~A~~Ll~EM~~kG~~PD~vtY~~ll~~~eR~~vL~ 253 (1134)
T 3spa_A 205 AALQCMGRQDQDAGTIERCLEQMSQEGLKLQALFTAVLLSEEDRATVLK 253 (1134)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHTCCSHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHcCCCCChhhcccccChhhHHHHHH
Confidence 99999999887 5788899999999999999999998886555544333
No 19
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.83 E-value=2.4e-18 Score=139.90 Aligned_cols=263 Identities=11% Similarity=-0.041 Sum_probs=206.0
Q ss_pred HHHhcCchhhHHH-HHHHHHhcCC-CC--cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHH
Q 021791 13 GWCKINRIDMAER-FLGEMIERGV-EP--NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88 (307)
Q Consensus 13 ~~~~~g~~~~a~~-~~~~~~~~~~-~p--~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 88 (307)
++...|++++|.+ .|++...... .| +...+..+...+.. .|++++|...|+++.+.. +.+...+.
T Consensus 34 ~~~~~~~~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~A~~~~~~al~~~-p~~~~~~~ 102 (368)
T 1fch_A 34 AHPWLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQ----------EGDLPNAVLLFEAAVQQD-PKHMEAWQ 102 (368)
T ss_dssp ------------CHHHHCCCCCCSSCTTTTCSSHHHHHHHHHH----------TTCHHHHHHHHHHHHHSC-TTCHHHHH
T ss_pred hhHHHHHHHHHHhhhhhHHHhcCCCCcccchHHHHHHHHHHHH----------CCCHHHHHHHHHHHHHhC-CCCHHHHH
Confidence 3445677888887 7776554311 11 35567788888888 888999999999999874 45788999
Q ss_pred HHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHH---------
Q 021791 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC--------- 159 (307)
Q Consensus 89 ~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~--------- 159 (307)
.+..++...|++++|...++.+.+... .+..++..+...|...|++++|...++++...... +...+..
T Consensus 103 ~l~~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 180 (368)
T 1fch_A 103 YLGTTQAENEQELLAISALRRCLELKP-DNQTALMALAVSFTNESLQRQACEILRDWLRYTPA-YAHLVTPAEEGAGGAG 180 (368)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTT-TGGGCC----------
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHhhhhc
Confidence 999999999999999999999988764 37889999999999999999999999999986543 2222221
Q ss_pred ------HHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHH
Q 021791 160 ------FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233 (307)
Q Consensus 160 ------l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~ 233 (307)
.+..+...|++++|...++++.......++..++..+...+...|++++|...++.+.... +.+..++..+..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~l~~ 259 (368)
T 1fch_A 181 LGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVR-PNDYLLWNKLGA 259 (368)
T ss_dssp -----CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHH
T ss_pred ccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-cCCHHHHHHHHH
Confidence 2333448899999999999999875211268899999999999999999999999998764 336789999999
Q ss_pred HHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhhcC
Q 021791 234 GLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290 (307)
Q Consensus 234 ~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~ 290 (307)
++...|++++|...|+++++.. +.+..++..+...+.+.|++++|...+++..+..
T Consensus 260 ~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 315 (368)
T 1fch_A 260 TLANGNQSEEAVAAYRRALELQ-PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQ 315 (368)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 9999999999999999998863 3457789999999999999999999999886543
No 20
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.83 E-value=5.7e-18 Score=132.98 Aligned_cols=253 Identities=9% Similarity=0.020 Sum_probs=179.3
Q ss_pred HHHHHhcCchhhHHHHHHHHHhcCCCCcH--HHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHH
Q 021791 11 IYGWCKINRIDMAERFLGEMIERGVEPNV--VTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88 (307)
Q Consensus 11 i~~~~~~g~~~~a~~~~~~~~~~~~~p~~--~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 88 (307)
++-....|++..|+..++..... .|+. .....+.+++.. .|+++.|+..++. .-+|+..++.
T Consensus 6 ~~~~~~~g~y~~ai~~~~~~~~~--~p~~~~e~~~~l~r~yi~----------~g~~~~al~~~~~----~~~~~~~a~~ 69 (291)
T 3mkr_A 6 VKNAFYIGSYQQCINEAQRVKPS--SPERDVERDVFLYRAYLA----------QRKYGVVLDEIKP----SSAPELQAVR 69 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCCC--SHHHHHHHHHHHHHHHHH----------TTCHHHHHHHSCT----TSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccC--CchhhHHHHHHHHHHHHH----------CCCHHHHHHHhcc----cCChhHHHHH
Confidence 34455678888888887765443 3433 345566777777 6677777765543 2356777788
Q ss_pred HHHHHHHhcCCchhHHHHHHHHHHcCCCC-chhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcC
Q 021791 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICP-TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR 167 (307)
Q Consensus 89 ~ll~~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (307)
.+...+...++.++|++.++++...+..| +...+..+...+...|++++|++.+++ +.+...+..+...+.+.
T Consensus 70 ~la~~~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~------~~~~~~~~~l~~~~~~~ 143 (291)
T 3mkr_A 70 MFAEYLASHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ------GDSLECMAMTVQILLKL 143 (291)
T ss_dssp HHHHHHHCSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT------CCSHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC------CCCHHHHHHHHHHHHHC
Confidence 88888888888888888888887765434 455566667888888888888888876 34677888888888888
Q ss_pred CChhHHHHHHHHHhhcCCCCccHHH---HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHH
Q 021791 168 KDANGAMKLYRQMKEDDLCVPNIHT---YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244 (307)
Q Consensus 168 ~~~~~a~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a 244 (307)
|++++|...++.+.+.. |+... ....+..+...|++++|..+|+++.... +.+...++.+..++.+.|++++|
T Consensus 144 g~~~~A~~~l~~~~~~~---p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~-p~~~~~~~~la~~~~~~g~~~eA 219 (291)
T 3mkr_A 144 DRLDLARKELKKMQDQD---EDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKC-SPTLLLLNGQAACHMAQGRWEAA 219 (291)
T ss_dssp TCHHHHHHHHHHHHHHC---TTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHTTCHHHH
T ss_pred CCHHHHHHHHHHHHhhC---cCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHH
Confidence 88888888888887764 33221 1223334445578888888888888763 44777888888888888888888
Q ss_pred HHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHH-HHHHHHHhhhcC
Q 021791 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT-WRRLKKKLDEES 290 (307)
Q Consensus 245 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~-a~~~~~~~~~~~ 290 (307)
...|++.++.. +-++.++..++..+...|+.++ +.++++++.+..
T Consensus 220 ~~~l~~al~~~-p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~ 265 (291)
T 3mkr_A 220 EGVLQEALDKD-SGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAH 265 (291)
T ss_dssp HHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhC
Confidence 88888887763 3356677778888888887754 567777765543
No 21
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.82 E-value=3.1e-18 Score=139.18 Aligned_cols=238 Identities=11% Similarity=-0.022 Sum_probs=196.7
Q ss_pred cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCC
Q 021791 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117 (307)
Q Consensus 38 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~ 117 (307)
+...+..+...+.+ .|++++|...|+++.+.. +.+..++..+..++...|++++|.+.|+++.+... .
T Consensus 64 ~~~~~~~~~~~~~~----------~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-~ 131 (365)
T 4eqf_A 64 DWPGAFEEGLKRLK----------EGDLPVTILFMEAAILQD-PGDAEAWQFLGITQAENENEQAAIVALQRCLELQP-N 131 (365)
T ss_dssp TCTTHHHHHHHHHH----------HTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-T
T ss_pred chhHHHHHHHHHHH----------CCCHHHHHHHHHHHHHhC-cCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC-C
Confidence 44558888888888 889999999999999874 45788999999999999999999999999988753 3
Q ss_pred chhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCH----------hhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCC
Q 021791 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA----------ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCV 187 (307)
Q Consensus 118 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~----------~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 187 (307)
+..++..+...|...|++++|...++++.+.... +. ..+..+...+...|++++|...++++.......
T Consensus 132 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 210 (365)
T 4eqf_A 132 NLKALMALAVSYTNTSHQQDACEALKNWIKQNPK-YKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDM 210 (365)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHCC-------------------CCHHHHHHHHHHHHHHHHSCSS
T ss_pred CHHHHHHHHHHHHccccHHHHHHHHHHHHHhCcc-chHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCc
Confidence 6889999999999999999999999999875321 12 233345788999999999999999999886211
Q ss_pred ccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHH
Q 021791 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267 (307)
Q Consensus 188 ~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~ 267 (307)
++..++..+...+...|++++|.+.++.+.... +.+..+|..+..+|...|++++|...|+++++.. +.+..++..+.
T Consensus 211 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~ 288 (365)
T 4eqf_A 211 IDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVR-PEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQ-PGFIRSRYNLG 288 (365)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCchHHHHHHH
Confidence 278899999999999999999999999998874 3378899999999999999999999999999863 33577899999
Q ss_pred HHHhhchhHHHHHHHHHHhhhcC
Q 021791 268 RGLIQSDMLRTWRRLKKKLDEES 290 (307)
Q Consensus 268 ~~~~~~g~~~~a~~~~~~~~~~~ 290 (307)
.+|...|++++|...+++..+..
T Consensus 289 ~~~~~~g~~~~A~~~~~~al~~~ 311 (365)
T 4eqf_A 289 ISCINLGAYREAVSNFLTALSLQ 311 (365)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHhC
Confidence 99999999999999999986544
No 22
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.82 E-value=1.4e-17 Score=133.07 Aligned_cols=259 Identities=7% Similarity=-0.071 Sum_probs=214.4
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHH-HHHHHHHHHHHHHhcCCC
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK-TIRNAEKVFDEMRVRGIE 81 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~-~~~~a~~~~~~~~~~~~~ 81 (307)
+...+..++..+...|++++|..+++++.+.. +.+...+..+...+.. .+ ++++|.+.|++..+.. +
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~----------~~~~~~~A~~~~~~a~~~~-~ 122 (330)
T 3hym_B 55 HASCLPVHIGTLVELNKANELFYLSHKLVDLY-PSNPVSWFAVGCYYLM----------VGHKNEHARRYLSKATTLE-K 122 (330)
T ss_dssp CTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTSTHHHHHHHHHHHH----------SCSCHHHHHHHHHHHHTTC-T
T ss_pred ChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhC-cCCHHHHHHHHHHHHH----------hhhhHHHHHHHHHHHHHhC-C
Confidence 34556678888999999999999999998863 3366788888888888 66 7899999999998774 3
Q ss_pred CCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHH
Q 021791 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161 (307)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 161 (307)
.+...|..+...+...|++++|.+.++.+.+.... +...+..+...|...|++++|...+++....... +...+..+.
T Consensus 123 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~ 200 (330)
T 3hym_B 123 TYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPE-DPFVMHEVG 200 (330)
T ss_dssp TCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCC-ChHHHHHHH
Confidence 46778999999999999999999999999887543 5677888999999999999999999999987543 678899999
Q ss_pred HHHhcCCChhHHHHHHHHHhhcCC-------CCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHH
Q 021791 162 KEYRGRKDANGAMKLYRQMKEDDL-------CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234 (307)
Q Consensus 162 ~~~~~~~~~~~a~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~ 234 (307)
..+...|++++|...+++...... .+.+..++..+...+...|++++|...++...+... .+...+..+..+
T Consensus 201 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~-~~~~~~~~la~~ 279 (330)
T 3hym_B 201 VVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIP-QNASTYSAIGYI 279 (330)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-TCSHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCc-cchHHHHHHHHH
Confidence 999999999999999999876421 023457899999999999999999999999988643 377889999999
Q ss_pred HHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHH-hhchhHH
Q 021791 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL-IQSDMLR 277 (307)
Q Consensus 235 ~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~-~~~g~~~ 277 (307)
+...|++++|...+++..+.. +.+...+..+..++ ...|+.+
T Consensus 280 ~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~~g~~~ 322 (330)
T 3hym_B 280 HSLMGNFENAVDYFHTALGLR-RDDTFSVTMLGHCIEMYIGDSE 322 (330)
T ss_dssp HHHHTCHHHHHHHHHTTTTTC-SCCHHHHHHHHHHHHTTTTC--
T ss_pred HHHhccHHHHHHHHHHHHccC-CCchHHHHHHHHHHHHHhCchh
Confidence 999999999999999988652 23566777777777 5566554
No 23
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.82 E-value=3.3e-17 Score=139.86 Aligned_cols=267 Identities=11% Similarity=0.030 Sum_probs=213.6
Q ss_pred HHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCC
Q 021791 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPD 83 (307)
Q Consensus 4 ~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 83 (307)
+..|..+...+.+.|++++|.+.|+++.... +.+...|..+..++.. .|++++|++.|+++.+.. +.+
T Consensus 25 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~----------~g~~~~A~~~~~~al~~~-p~~ 92 (537)
T 3fp2_A 25 AVQLKNRGNHFFTAKNFNEAIKYYQYAIELD-PNEPVFYSNISACYIS----------TGDLEKVIEFTTKALEIK-PDH 92 (537)
T ss_dssp HHHHHHHHHHHHHTTCCC-CHHHHHHHHHHC-TTCHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHC-TTC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhC-CCCcHHHHHHHHHHHH----------cCCHHHHHHHHHHHHhcC-Cch
Confidence 4567778888888888888888888888763 3366778888888888 778888888888887764 346
Q ss_pred HHHHHHHHHHHHhcCCchhHHHHHHHH-----------------------------------------------------
Q 021791 84 VTSFSIVLHVYSRAHKPQLSLDKLNFM----------------------------------------------------- 110 (307)
Q Consensus 84 ~~~~~~ll~~~~~~~~~~~a~~~~~~~----------------------------------------------------- 110 (307)
...+..+..++...|++++|...|+.+
T Consensus 93 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 172 (537)
T 3fp2_A 93 SKALLRRASANESLGNFTDAMFDLSVLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASFFG 172 (537)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHHHHCC-------CCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccchHhHHHHHHH
Confidence 777888888888888888887766422
Q ss_pred --------------------------------------------------------HHcCCCCc--------hhhHHHHH
Q 021791 111 --------------------------------------------------------KEKGICPT--------VATYTSVV 126 (307)
Q Consensus 111 --------------------------------------------------------~~~~~~~~--------~~~~~~ll 126 (307)
.+. .|+ ..++..+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~--~p~~~~~~~~~~~~~~~~g 250 (537)
T 3fp2_A 173 IFDSHLEVSSVNTSSNYDTAYALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSA--NTVDDPLRENAALALCYTG 250 (537)
T ss_dssp TSCHHHHHHTSCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC----CCCHHHHHHHHHHHHHHH
T ss_pred hcChHHHHHHHhhccccccHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH--CCCcchhhHHHHHHHHHHH
Confidence 111 122 22455666
Q ss_pred HHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcH
Q 021791 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206 (307)
Q Consensus 127 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 206 (307)
..+...|++++|...++++.... |+...+..+...+...|++++|...+++..... +.+..++..+...+...|++
T Consensus 251 ~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~ 326 (537)
T 3fp2_A 251 IFHFLKNNLLDAQVLLQESINLH--PTPNSYIFLALTLADKENSQEFFKFFQKAVDLN--PEYPPTYYHRGQMYFILQDY 326 (537)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHhcccHHHHHHHHHHHHhcC--CCchHHHHHHHHHHHhcCHHHHHHHHHHHhccC--CCCHHHHHHHHHHHHhcCCH
Confidence 77888899999999999998864 457888889999999999999999999998875 56788899999999999999
Q ss_pred HHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHh
Q 021791 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286 (307)
Q Consensus 207 ~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~ 286 (307)
++|...++.+..... .+...+..+..++...|++++|...++++.+.. +.+...+..+...+...|++++|...+++.
T Consensus 327 ~~A~~~~~~a~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 404 (537)
T 3fp2_A 327 KNAKEDFQKAQSLNP-ENVYPYIQLACLLYKQGKFTESEAFFNETKLKF-PTLPEVPTFFAEILTDRGDFDTAIKQYDIA 404 (537)
T ss_dssp HHHHHHHHHHHHHCT-TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999999988643 257788999999999999999999999998873 345668888899999999999999999998
Q ss_pred hhcC
Q 021791 287 DEES 290 (307)
Q Consensus 287 ~~~~ 290 (307)
.+..
T Consensus 405 ~~~~ 408 (537)
T 3fp2_A 405 KRLE 408 (537)
T ss_dssp HHHH
T ss_pred HHcC
Confidence 6654
No 24
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.82 E-value=6.4e-17 Score=138.08 Aligned_cols=280 Identities=10% Similarity=-0.001 Sum_probs=221.7
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhh---------------------
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERF--------------------- 61 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~--------------------- 61 (307)
++..|..+..+|...|++++|++.|+++.+.+ +.+...+..+..++...|++..+...
T Consensus 58 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 136 (537)
T 3fp2_A 58 EPVFYSNISACYISTGDLEKVIEFTTKALEIK-PDHSKALLRRASANESLGNFTDAMFDLSVLSLNGDFDGASIEPMLER 136 (537)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHC-----------CHHHH
T ss_pred CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CchHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCChHHHHHHHHH
Confidence 56788888888889999999999999888763 23566777777777776554333210
Q ss_pred ------------------------------------------------------------------------------HH
Q 021791 62 ------------------------------------------------------------------------------EK 63 (307)
Q Consensus 62 ------------------------------------------------------------------------------~~ 63 (307)
.+
T Consensus 137 ~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~ 216 (537)
T 3fp2_A 137 NLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASFFGIFDSHLEVSSVNTSSNYDTAYALLSDALQRLYSATDEGYLVAND 216 (537)
T ss_dssp HHHHHHHHHHHHHCC-------CCCCCHHHHHHHHHTSCHHHHHHTSCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCccccccccchHhHHHHHHHhcChHHHHHHHhhccccccHHHHHHHHHHHHHHhhhhhhHHHHH
Confidence 13
Q ss_pred HHHHHHHHHHHHHhcCCCCC-------HHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChH
Q 021791 64 TIRNAEKVFDEMRVRGIEPD-------VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE 136 (307)
Q Consensus 64 ~~~~a~~~~~~~~~~~~~~~-------~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~ 136 (307)
++++|..+++++.+.. +.+ ..++..+...+...|++++|.+.++...+.. |+..++..+...+...|+++
T Consensus 217 ~~~~A~~~~~~~l~~~-p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~ 293 (537)
T 3fp2_A 217 LLTKSTDMYHSLLSAN-TVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLH--PTPNSYIFLALTLADKENSQ 293 (537)
T ss_dssp HHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHTCCSSCCH
T ss_pred HHHHHHHHHHHHHHHC-CCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcC--CCchHHHHHHHHHHHhcCHH
Confidence 6677777777777653 112 2356677788889999999999999999874 45788999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHH
Q 021791 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216 (307)
Q Consensus 137 ~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~ 216 (307)
+|...++++...... +..++..+...+...|++++|...+++..... +.+..++..+...+...|++++|...++.+
T Consensus 294 ~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 370 (537)
T 3fp2_A 294 EFFKFFQKAVDLNPE-YPPTYYHRGQMYFILQDYKNAKEDFQKAQSLN--PENVYPYIQLACLLYKQGKFTESEAFFNET 370 (537)
T ss_dssp HHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999999999887543 68889999999999999999999999999875 556788999999999999999999999999
Q ss_pred hhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCC-----CCcHhhHHHHHHHHhhc----------hhHHHHHH
Q 021791 217 KGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGL-----LPQKVTFETLYRGLIQS----------DMLRTWRR 281 (307)
Q Consensus 217 ~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~-----~p~~~~~~~l~~~~~~~----------g~~~~a~~ 281 (307)
.... +.+...+..+...+...|++++|...|+++.+... ......+......+... |++++|..
T Consensus 371 ~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~ 449 (537)
T 3fp2_A 371 KLKF-PTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIK 449 (537)
T ss_dssp HHHC-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHH
T ss_pred HHhC-CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHH
Confidence 8874 33677899999999999999999999999877521 11112244445667777 99999999
Q ss_pred HHHHhhhcC
Q 021791 282 LKKKLDEES 290 (307)
Q Consensus 282 ~~~~~~~~~ 290 (307)
.+++..+..
T Consensus 450 ~~~~a~~~~ 458 (537)
T 3fp2_A 450 LLTKACELD 458 (537)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999987654
No 25
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.80 E-value=5.5e-17 Score=125.03 Aligned_cols=227 Identities=13% Similarity=0.055 Sum_probs=194.7
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCC--
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI-- 80 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-- 80 (307)
.+..|..+...+...|++++|.+.|++..+.. .+...+..+..++.. .|++++|.+.+++..+...
T Consensus 4 ~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~----------~~~~~~A~~~~~~a~~~~~~~ 71 (258)
T 3uq3_A 4 MADKEKAEGNKFYKARQFDEAIEHYNKAWELH--KDITYLNNRAAAEYE----------KGEYETAISTLNDAVEQGREM 71 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CCTHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH----------cccHHHHHHHHHHHHHhCccc
Confidence 45678899999999999999999999999887 788899999999999 8889999999999877521
Q ss_pred CCC----HHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhh
Q 021791 81 EPD----VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAET 156 (307)
Q Consensus 81 ~~~----~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 156 (307)
.++ ..++..+...+...|++++|...++...+.. |+. ..+...|++++|...++++...... +...
T Consensus 72 ~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--~~~-------~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~ 141 (258)
T 3uq3_A 72 RADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEH--RTA-------DILTKLRNAEKELKKAEAEAYVNPE-KAEE 141 (258)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CCH-------HHHHHHHHHHHHHHHHHHHHHCCHH-HHHH
T ss_pred ccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC--chh-------HHHHHHhHHHHHHHHHHHHHHcCcc-hHHH
Confidence 112 5788999999999999999999999998864 342 3566778899999999999886432 5678
Q ss_pred HHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHH
Q 021791 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLC 236 (307)
Q Consensus 157 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~ 236 (307)
+..+...+...|++++|...+++..... +.+..++..+...+...|++++|...++.+.... +.+...|..+..++.
T Consensus 142 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~ 218 (258)
T 3uq3_A 142 ARLEGKEYFTKSDWPNAVKAYTEMIKRA--PEDARGYSNRAAALAKLMSFPEAIADCNKAIEKD-PNFVRAYIRKATAQI 218 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcC--cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH
Confidence 8888999999999999999999998876 5678899999999999999999999999998864 336788999999999
Q ss_pred ccCcHHHHHHHHHHHHHc
Q 021791 237 EKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 237 ~~g~~~~a~~~~~~~~~~ 254 (307)
..|++++|...+++..+.
T Consensus 219 ~~g~~~~A~~~~~~a~~~ 236 (258)
T 3uq3_A 219 AVKEYASALETLDAARTK 236 (258)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHh
Confidence 999999999999998765
No 26
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.80 E-value=1.3e-16 Score=125.25 Aligned_cols=247 Identities=11% Similarity=0.104 Sum_probs=198.5
Q ss_pred HHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCC-CH
Q 021791 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP-DV 84 (307)
Q Consensus 6 ~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~ 84 (307)
..-.+.++|...|+++.|+..++. .-+|+..++..+...+.. .++.++|++.++++...+..| +.
T Consensus 36 ~~~~l~r~yi~~g~~~~al~~~~~----~~~~~~~a~~~la~~~~~----------~~~~~~A~~~l~~ll~~~~~P~~~ 101 (291)
T 3mkr_A 36 RDVFLYRAYLAQRKYGVVLDEIKP----SSAPELQAVRMFAEYLAS----------HSRRDAIVAELDREMSRSVDVTNT 101 (291)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHSCT----TSCHHHHHHHHHHHHHHC----------STTHHHHHHHHHHHHHSCCCCSCH
T ss_pred HHHHHHHHHHHCCCHHHHHHHhcc----cCChhHHHHHHHHHHHcC----------CCcHHHHHHHHHHHHhcccCCCCH
Confidence 445578999999999999986654 235677788888888888 778899999999998876544 56
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhH---HHHH
Q 021791 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETY---NCFF 161 (307)
Q Consensus 85 ~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~---~~l~ 161 (307)
..+..+...+...|++++|++.++. +.+...+..++..+.+.|++++|...++++.+.. |+.... ..++
T Consensus 102 ~~~~~la~~~~~~g~~~~Al~~l~~------~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~--p~~~~~~l~~a~~ 173 (291)
T 3mkr_A 102 TFLLMAASIYFYDQNPDAALRTLHQ------GDSLECMAMTVQILLKLDRLDLARKELKKMQDQD--EDATLTQLATAWV 173 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHTT------CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHhC------CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC--cCcHHHHHHHHHH
Confidence 6777888999999999999999987 4578899999999999999999999999999874 443211 2334
Q ss_pred HHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcH
Q 021791 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241 (307)
Q Consensus 162 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~ 241 (307)
..+...|++++|..+|+++.+.. +.+...++.+..++.+.|++++|...++++..... -+..++..++..+...|+.
T Consensus 174 ~l~~~~~~~~eA~~~~~~~l~~~--p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p-~~~~~l~~l~~~~~~~g~~ 250 (291)
T 3mkr_A 174 SLAAGGEKLQDAYYIFQEMADKC--SPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDS-GHPETLINLVVLSQHLGKP 250 (291)
T ss_dssp HHHHCTTHHHHHHHHHHHHHHHS--CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCC
T ss_pred HHHhCchHHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCC
Confidence 45556799999999999999885 78899999999999999999999999999988753 3788899999999999998
Q ss_pred HH-HHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHH
Q 021791 242 KE-ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRL 282 (307)
Q Consensus 242 ~~-a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~ 282 (307)
++ +..+++++++. .|+... +.+...+.+.++++..-
T Consensus 251 ~eaa~~~~~~~~~~--~P~~~~---~~d~~~~~~~fd~~~~~ 287 (291)
T 3mkr_A 251 PEVTNRYLSQLKDA--HRSHPF---IKEYRAKENDFDRLVLQ 287 (291)
T ss_dssp HHHHHHHHHHHHHH--CTTCHH---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh--CCCChH---HHHHHHHHHHHHHHHHH
Confidence 75 67899999875 455433 23445666666666543
No 27
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.79 E-value=3.9e-17 Score=122.78 Aligned_cols=201 Identities=8% Similarity=-0.058 Sum_probs=164.8
Q ss_pred CCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHH
Q 021791 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160 (307)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l 160 (307)
+++...+..+...+.+.|++++|...|+...+.... +...+..+...+.+.|++++|...+++..+..+. +...+..+
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~l 79 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPR-YLGGYMVL 79 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHH
Confidence 567778889999999999999999999999987543 7888999999999999999999999999987544 67888999
Q ss_pred HHHHhcC-----------CChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHH
Q 021791 161 FKEYRGR-----------KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYT 229 (307)
Q Consensus 161 ~~~~~~~-----------~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 229 (307)
...+... |++++|...+++..+.. +.+...+..+..++...|++++|+..+++..+.. .+...+.
T Consensus 80 g~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~--P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~ 155 (217)
T 2pl2_A 80 SEAYVALYRQAEDRERGKGYLEQALSVLKDAERVN--PRYAPLHLQRGLVYALLGERDKAEASLKQALALE--DTPEIRS 155 (217)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CCHHHHH
T ss_pred HHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhC--cccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc--cchHHHH
Confidence 9999999 99999999999999875 5678899999999999999999999999999887 5889999
Q ss_pred HHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhh
Q 021791 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288 (307)
Q Consensus 230 ~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~ 288 (307)
.+..+|...|++++|+..|++.++.. +.+...+..+...+...|++++|...+++...
T Consensus 156 ~la~~~~~~g~~~~A~~~~~~al~~~-P~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 213 (217)
T 2pl2_A 156 ALAELYLSMGRLDEALAQYAKALEQA-PKDLDLRVRYASALLLKGKAEEAARAAALEHH 213 (217)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHTC----------------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHccCHHHHHHHHHHHhh
Confidence 99999999999999999999999863 34567788899999999999999999987654
No 28
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.78 E-value=1.3e-16 Score=127.35 Aligned_cols=237 Identities=8% Similarity=-0.054 Sum_probs=197.4
Q ss_pred cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCC
Q 021791 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117 (307)
Q Consensus 38 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~ 117 (307)
+...+..+...+.. .+++++|..+|+++.+.. +.+...+..+..++...|++++|.+.++.+.+... .
T Consensus 20 ~~~~~~~~a~~~~~----------~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~-~ 87 (327)
T 3cv0_A 20 YHENPMEEGLSMLK----------LANLAEAALAFEAVCQAA-PEREEAWRSLGLTQAENEKDGLAIIALNHARMLDP-K 87 (327)
T ss_dssp GSSCHHHHHHHHHH----------TTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-T
T ss_pred hhHHHHHHHHHHHH----------hccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCc-C
Confidence 34456666777777 788999999999998874 44788899999999999999999999999988753 3
Q ss_pred chhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHH--------------HH-HHhcCCChhHHHHHHHHHhh
Q 021791 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF--------------FK-EYRGRKDANGAMKLYRQMKE 182 (307)
Q Consensus 118 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l--------------~~-~~~~~~~~~~a~~~~~~~~~ 182 (307)
+..++..+...+...|++++|...++++...... +...+..+ .. .+...|++++|...++++.+
T Consensus 88 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 166 (327)
T 3cv0_A 88 DIAVHAALAVSHTNEHNANAALASLRAWLLSQPQ-YEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALE 166 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTT-TTTC--------------------CCTTSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHh
Confidence 7788999999999999999999999999886433 33333333 22 37788999999999999998
Q ss_pred cCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhh
Q 021791 183 DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262 (307)
Q Consensus 183 ~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~ 262 (307)
.. +.+..++..+...+...|++++|.+.++.+.... +.+...+..+...+...|++++|...++++.+.. +.+..+
T Consensus 167 ~~--~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~ 242 (327)
T 3cv0_A 167 MN--PNDAQLHASLGVLYNLSNNYDSAAANLRRAVELR-PDDAQLWNKLGATLANGNRPQEALDAYNRALDIN-PGYVRV 242 (327)
T ss_dssp HS--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred hC--CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCCHHH
Confidence 76 5678899999999999999999999999998764 3367889999999999999999999999998863 346778
Q ss_pred HHHHHHHHhhchhHHHHHHHHHHhhhcCC
Q 021791 263 FETLYRGLIQSDMLRTWRRLKKKLDEESI 291 (307)
Q Consensus 263 ~~~l~~~~~~~g~~~~a~~~~~~~~~~~~ 291 (307)
+..+...+...|++++|.+.+++..+...
T Consensus 243 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 271 (327)
T 3cv0_A 243 MYNMAVSYSNMSQYDLAAKQLVRAIYMQV 271 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 89999999999999999999998866543
No 29
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.77 E-value=1.8e-16 Score=122.18 Aligned_cols=227 Identities=10% Similarity=0.023 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCC--
Q 021791 39 VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC-- 116 (307)
Q Consensus 39 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~-- 116 (307)
...+..+...+.. .|++++|...|++..+.. .+...+..+..++...|++++|.+.++...+....
T Consensus 5 a~~~~~~g~~~~~----------~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 72 (258)
T 3uq3_A 5 ADKEKAEGNKFYK----------ARQFDEAIEHYNKAWELH--KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMR 72 (258)
T ss_dssp HHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHS--CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH----------hccHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccc
Confidence 4567777788888 788999999999999887 78889999999999999999999999998775321
Q ss_pred Cc----hhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHH
Q 021791 117 PT----VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT 192 (307)
Q Consensus 117 ~~----~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 192 (307)
++ ..++..+...+...|++++|...|++..... |+. ..+...|++++|...++...... +.+...
T Consensus 73 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--~~~-------~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~ 141 (258)
T 3uq3_A 73 ADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEH--RTA-------DILTKLRNAEKELKKAEAEAYVN--PEKAEE 141 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CCH-------HHHHHHHHHHHHHHHHHHHHHCC--HHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC--chh-------HHHHHHhHHHHHHHHHHHHHHcC--cchHHH
Confidence 12 5788999999999999999999999998853 443 34566788999999999998875 567788
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhh
Q 021791 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272 (307)
Q Consensus 193 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~ 272 (307)
+..+...+...|++++|...++.+..... .+...+..+..++...|++++|...+++.++.. +.+..++..+...+..
T Consensus 142 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~ 219 (258)
T 3uq3_A 142 ARLEGKEYFTKSDWPNAVKAYTEMIKRAP-EDARGYSNRAAALAKLMSFPEAIADCNKAIEKD-PNFVRAYIRKATAQIA 219 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCc-ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988643 378889999999999999999999999999873 3457788999999999
Q ss_pred chhHHHHHHHHHHhhhcC
Q 021791 273 SDMLRTWRRLKKKLDEES 290 (307)
Q Consensus 273 ~g~~~~a~~~~~~~~~~~ 290 (307)
.|++++|...+++..+..
T Consensus 220 ~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 220 VKEYASALETLDAARTKD 237 (258)
T ss_dssp TTCHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHhC
Confidence 999999999999886554
No 30
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.75 E-value=1.4e-17 Score=134.45 Aligned_cols=206 Identities=9% Similarity=0.050 Sum_probs=70.2
Q ss_pred ccHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCC
Q 021791 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE 81 (307)
Q Consensus 2 p~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 81 (307)
|+..+|..++.++.+.|++++|++.|.+. +|..+|..++.++.. .|++++|++.++...+. .
T Consensus 30 ~~~~vWs~La~A~l~~g~~~eAIdsfika------~D~~~y~~V~~~ae~----------~g~~EeAi~yl~~ark~--~ 91 (449)
T 1b89_A 30 NEPAVWSQLAKAQLQKGMVKEAIDSYIKA------DDPSSYMEVVQAANT----------SGNWEELVKYLQMARKK--A 91 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHcC------CCHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHh--C
Confidence 34557777777777777777777777542 456677777777766 66777777766555543 3
Q ss_pred CCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHH
Q 021791 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161 (307)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 161 (307)
+++.+.+.++.+|.+.|+++++.++++ .|+..+|+.+...|...|.+++|...|..+ ..|..++
T Consensus 92 ~~~~i~~~Li~~Y~Klg~l~e~e~f~~-------~pn~~a~~~IGd~~~~~g~yeeA~~~Y~~a---------~n~~~LA 155 (449)
T 1b89_A 92 RESYVETELIFALAKTNRLAELEEFIN-------GPNNAHIQQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLA 155 (449)
T ss_dssp -----------------CHHHHTTTTT-------CC----------------CTTTHHHHHHHT---------TCHHHHH
T ss_pred ccchhHHHHHHHHHHhCCHHHHHHHHc-------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHh---------hhHHHHH
Confidence 445666677777777777777666663 245557777777777777777777777655 3666777
Q ss_pred HHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcH
Q 021791 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241 (307)
Q Consensus 162 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~ 241 (307)
.++.+.|++++|.+.++++ .++.+|..++.+|...|+++.|......+ ...+.....++..|.+.|++
T Consensus 156 ~~L~~Lg~yq~AVea~~KA-------~~~~~Wk~v~~aCv~~~ef~lA~~~~l~L-----~~~ad~l~~lv~~Yek~G~~ 223 (449)
T 1b89_A 156 STLVHLGEYQAAVDGARKA-------NSTRTWKEVCFACVDGKEFRLAQMCGLHI-----VVHADELEELINYYQDRGYF 223 (449)
T ss_dssp HHHHTTTCHHHHHHHHHHH-------TCHHHHHHHHHHHHHTTCHHHHHHTTTTT-----TTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhccHHHHHHHHHHc-------CCchhHHHHHHHHHHcCcHHHHHHHHHHH-----HhCHhhHHHHHHHHHHCCCH
Confidence 7777777777777777766 14566777777777777777774443322 22333344566667777777
Q ss_pred HHHHHHHHHHHH
Q 021791 242 KEACQYFVEMIE 253 (307)
Q Consensus 242 ~~a~~~~~~~~~ 253 (307)
++|..+++..+.
T Consensus 224 eEai~lLe~aL~ 235 (449)
T 1b89_A 224 EELITMLEAALG 235 (449)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhC
Confidence 777777766653
No 31
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.75 E-value=5e-15 Score=120.20 Aligned_cols=248 Identities=9% Similarity=0.030 Sum_probs=204.4
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHH-HHHHHHHHHHHHhcCCC
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKT-IRNAEKVFDEMRVRGIE 81 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~~~~~~~ 81 (307)
+..+|+.+...+...|++++|++.|++.+... +-+...|+.+..++.. .|+ +++|+..|++..+.. +
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~-P~~~~a~~~~g~~l~~----------~g~d~~eAl~~~~~al~l~-P 163 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELN-AANYTVWHFRRVLLKS----------LQKDLHEEMNYITAIIEEQ-P 163 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHH----------TTCCHHHHHHHHHHHHHHC-T
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHHhC-ccCHHHHHHHHHHHHH----------cccCHHHHHHHHHHHHHHC-C
Confidence 35678889999999999999999999999873 2256788888888888 776 999999999999875 3
Q ss_pred CCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHH
Q 021791 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161 (307)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 161 (307)
-+...|..+..++...|++++|+..|+++.+.... +...|..+..++.+.|++++|+..++++++.... +...|+.+.
T Consensus 164 ~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~-~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~-~~~a~~~lg 241 (382)
T 2h6f_A 164 KNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAK-NYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVR-NNSVWNQRY 241 (382)
T ss_dssp TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-CHHHHHHHH
Confidence 37889999999999999999999999999998654 8889999999999999999999999999988655 788999999
Q ss_pred HHHhc-CCChhHH-----HHHHHHHhhcCCCCccHHHHHHHHHHHHhcC--cHHHHHHHHHHHhhCCCCCCHHhHHHHHH
Q 021791 162 KEYRG-RKDANGA-----MKLYRQMKEDDLCVPNIHTYNILIGMFMALN--RMDMVREIWNHVKGSELGLDLDSYTMLIH 233 (307)
Q Consensus 162 ~~~~~-~~~~~~a-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~a~~~~~~~~~~~~~~~~~~~~~li~ 233 (307)
.++.. .|..++| +..+++..... +-+...|..+...+...| ++++|.+.+..+ +.. +.+...+..+..
T Consensus 242 ~~l~~l~~~~~eA~~~~el~~~~~Al~l~--P~~~~a~~~l~~ll~~~g~~~~~~a~~~~~~~-~~~-p~~~~al~~La~ 317 (382)
T 2h6f_A 242 FVISNTTGYNDRAVLEREVQYTLEMIKLV--PHNESAWNYLKGILQDRGLSKYPNLLNQLLDL-QPS-HSSPYLIAFLVD 317 (382)
T ss_dssp HHHHHTTCSCSHHHHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHTTTCGGGCHHHHHHHHHH-TTT-CCCHHHHHHHHH
T ss_pred HHHHHhcCcchHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHccCccchHHHHHHHHHh-ccC-CCCHHHHHHHHH
Confidence 99988 6665777 58888888875 667889999999998888 689999999888 432 346778888999
Q ss_pred HHHccC---------cHHHHHHHHHHH-HHcCCCCcH-hhHHHHHHHH
Q 021791 234 GLCEKQ---------KWKEACQYFVEM-IEKGLLPQK-VTFETLYRGL 270 (307)
Q Consensus 234 ~~~~~g---------~~~~a~~~~~~~-~~~~~~p~~-~~~~~l~~~~ 270 (307)
+|.+.| ..++|+.+++++ .+. .|.. ..|..+...+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~A~~~~~~l~~~~--DP~r~~~w~~~~~~l 363 (382)
T 2h6f_A 318 IYEDMLENQCDNKEDILNKALELCEILAKEK--DTIRKEYWRYIGRSL 363 (382)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHHHHTT--CGGGHHHHHHHHHHH
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHh--CchhHHHHHHHHHHH
Confidence 998864 358999999998 543 4543 3455554444
No 32
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.75 E-value=3.3e-16 Score=117.71 Aligned_cols=197 Identities=10% Similarity=0.011 Sum_probs=102.0
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCC
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 82 (307)
++..+..+...+.+.|++++|...|++..+.. +.+...+..+..++.+ .|++++|+..+++..+.. +.
T Consensus 4 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~----------~g~~~~A~~~~~~al~~~-P~ 71 (217)
T 2pl2_A 4 AEQNPLRLGVQLYALGRYDAALTLFERALKEN-PQDPEALYWLARTQLK----------LGLVNPALENGKTLVART-PR 71 (217)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS-SSCHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHC-TT
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHhC-CC
Confidence 55566666666666677777777666666542 2244555566666666 556666666666666553 23
Q ss_pred CHHHHHHHHHHHHhc-----------CCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCC
Q 021791 83 DVTSFSIVLHVYSRA-----------HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~-----------~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~ 151 (307)
+...+..+..++... |++++|...+++..+.... +...+..+...+...|++++|...|++..+..
T Consensus 72 ~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-- 148 (217)
T 2pl2_A 72 YLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE-- 148 (217)
T ss_dssp CHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--
T ss_pred cHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc--
Confidence 455666666666665 5555555555555554322 34445555555555555555555555555544
Q ss_pred CCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHH
Q 021791 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV 216 (307)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~ 216 (307)
.+...+..+..++...|++++|...|++..+.. +.+...+..+...+...|++++|...++..
T Consensus 149 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~--P~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 149 DTPEIRSALAELYLSMGRLDEALAQYAKALEQA--PKDLDLRVRYASALLLKGKAEEAARAAALE 211 (217)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHTC--------------
T ss_pred cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 345555555555555555555555555555443 334444555555555555555555554443
No 33
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.74 E-value=3.2e-15 Score=114.89 Aligned_cols=203 Identities=10% Similarity=-0.006 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHH
Q 021791 84 VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163 (307)
Q Consensus 84 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (307)
...+..+...+...|++++|.+.++++.+... .+..++..+...|...|++++|.+.++++.+.... +...+..+...
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~ 114 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDP-SSADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGF 114 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHH
Confidence 56788889999999999999999999988753 37788999999999999999999999999887543 67889999999
Q ss_pred HhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHH
Q 021791 164 YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243 (307)
Q Consensus 164 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~ 243 (307)
+...|++++|...++++...+..+.+...+..+...+...|++++|.+.++.+.... +.+...+..+...+...|++++
T Consensus 115 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~g~~~~ 193 (252)
T 2ho1_A 115 LYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLN-RNQPSVALEMADLLYKEREYVP 193 (252)
T ss_dssp HHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHcCCHHH
Confidence 999999999999999998832214567888999999999999999999999988764 3368889999999999999999
Q ss_pred HHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhhcC
Q 021791 244 ACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290 (307)
Q Consensus 244 a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~ 290 (307)
|...++++.+.. +.+...+..+...+...|+.++|.++++++.+..
T Consensus 194 A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~ 239 (252)
T 2ho1_A 194 ARQYYDLFAQGG-GQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLY 239 (252)
T ss_dssp HHHHHHHHHTTS-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC-cCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC
Confidence 999999998753 4566778888889999999999999999987654
No 34
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.74 E-value=3.5e-16 Score=121.81 Aligned_cols=248 Identities=10% Similarity=-0.030 Sum_probs=194.4
Q ss_pred HhcCchhhHHHHHHHHHhcCCC---CcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 021791 15 CKINRIDMAERFLGEMIERGVE---PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVL 91 (307)
Q Consensus 15 ~~~g~~~~a~~~~~~~~~~~~~---p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll 91 (307)
...|++++|++.|+++.+.... .+...+..+...+.. .|++++|...|+++.+.. +.+...+..+.
T Consensus 16 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~~~A~~~~~~al~~~-~~~~~~~~~la 84 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDS----------LGLRALARNDFSQALAIR-PDMPEVFNYLG 84 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHC-CCCHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHH----------cccHHHHHHHHHHHHHcC-CCcHHHHHHHH
Confidence 3568899999999999886321 246678888888888 888999999999998874 44788999999
Q ss_pred HHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChh
Q 021791 92 HVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN 171 (307)
Q Consensus 92 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 171 (307)
..+...|++++|.+.+++..+.... +..++..+...|...|++++|...++++.+.. |+.......+..+...|+++
T Consensus 85 ~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~~~~~~ 161 (275)
T 1xnf_A 85 IYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD--PNDPFRSLWLYLAEQKLDEK 161 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHCHH
T ss_pred HHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHhcCHH
Confidence 9999999999999999999987533 67889999999999999999999999998864 44444444555567779999
Q ss_pred HHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCC---CHHhHHHHHHHHHccCcHHHHHHHH
Q 021791 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL---DLDSYTMLIHGLCEKQKWKEACQYF 248 (307)
Q Consensus 172 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~li~~~~~~g~~~~a~~~~ 248 (307)
+|...+.+..... +++...+. ++..+...++.++|...+.......... +...+..+...|...|++++|...|
T Consensus 162 ~A~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 238 (275)
T 1xnf_A 162 QAKEVLKQHFEKS--DKEQWGWN-IVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALF 238 (275)
T ss_dssp HHHHHHHHHHHHS--CCCSTHHH-HHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHhcC--CcchHHHH-HHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999998887764 44544444 6777778888899999999887653211 1567888999999999999999999
Q ss_pred HHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHH
Q 021791 249 VEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLK 283 (307)
Q Consensus 249 ~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~ 283 (307)
++.++. .|+. +.....++...|++++|.+.+
T Consensus 239 ~~al~~--~p~~--~~~~~~~~~~l~~~~~a~~~~ 269 (275)
T 1xnf_A 239 KLAVAN--NVHN--FVEHRYALLELSLLGQDQDDL 269 (275)
T ss_dssp HHHHTT--CCTT--CHHHHHHHHHHHHHHHC----
T ss_pred HHHHhC--Cchh--HHHHHHHHHHHHHHHhhHHHH
Confidence 999865 3533 333455778889999988776
No 35
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.74 E-value=5.8e-18 Score=136.64 Aligned_cols=223 Identities=12% Similarity=0.132 Sum_probs=95.2
Q ss_pred hcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Q 021791 16 KINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYS 95 (307)
Q Consensus 16 ~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~ 95 (307)
+.|++++|.+.++++. +..+|..|..++.+ .+++++|++.|.+. +|..+|..++.++.
T Consensus 15 ~~~~ld~A~~fae~~~------~~~vWs~La~A~l~----------~g~~~eAIdsfika------~D~~~y~~V~~~ae 72 (449)
T 1b89_A 15 HIGNLDRAYEFAERCN------EPAVWSQLAKAQLQ----------KGMVKEAIDSYIKA------DDPSSYMEVVQAAN 72 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HccCHHHHHHHHHhCC------ChHHHHHHHHHHHH----------cCCHHHHHHHHHcC------CCHHHHHHHHHHHH
Confidence 5688999999999982 33599999999999 88999999999653 57889999999999
Q ss_pred hcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHH
Q 021791 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175 (307)
Q Consensus 96 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ 175 (307)
..|++++|+++++...+. .+++.+.+.++.+|.+.|+++++.++++ .|+..+|..+...|...|.+++|..
T Consensus 73 ~~g~~EeAi~yl~~ark~--~~~~~i~~~Li~~Y~Klg~l~e~e~f~~-------~pn~~a~~~IGd~~~~~g~yeeA~~ 143 (449)
T 1b89_A 73 TSGNWEELVKYLQMARKK--ARESYVETELIFALAKTNRLAELEEFIN-------GPNNAHIQQVGDRCYDEKMYDAAKL 143 (449)
T ss_dssp --------------------------------------CHHHHTTTTT-------CC----------------CTTTHHH
T ss_pred hCCCHHHHHHHHHHHHHh--CccchhHHHHHHHHHHhCCHHHHHHHHc-------CCcHHHHHHHHHHHHHcCCHHHHHH
Confidence 999999999988777764 4567889999999999999999988874 3677899999999999999999999
Q ss_pred HHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcC
Q 021791 176 LYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG 255 (307)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~ 255 (307)
.|..+ ..|..++.++.+.|++++|.+.+..+ .++.+|..++.+|+..|+++.|......+
T Consensus 144 ~Y~~a----------~n~~~LA~~L~~Lg~yq~AVea~~KA------~~~~~Wk~v~~aCv~~~ef~lA~~~~l~L---- 203 (449)
T 1b89_A 144 LYNNV----------SNFGRLASTLVHLGEYQAAVDGARKA------NSTRTWKEVCFACVDGKEFRLAQMCGLHI---- 203 (449)
T ss_dssp HHHHT----------TCHHHHHHHHHTTTCHHHHHHHHHHH------TCHHHHHHHHHHHHHTTCHHHHHHTTTTT----
T ss_pred HHHHh----------hhHHHHHHHHHHhccHHHHHHHHHHc------CCchhHHHHHHHHHHcCcHHHHHHHHHHH----
Confidence 99977 36899999999999999999999988 28899999999999999999996655542
Q ss_pred CCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhhcC
Q 021791 256 LLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290 (307)
Q Consensus 256 ~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~ 290 (307)
...+.-...++..|.+.|.+++|..+++......
T Consensus 204 -~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le 237 (449)
T 1b89_A 204 -VVHADELEELINYYQDRGYFEELITMLEAALGLE 237 (449)
T ss_dssp -TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTST
T ss_pred -HhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCc
Confidence 2333445678899999999999999999875443
No 36
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.74 E-value=4.8e-15 Score=113.89 Aligned_cols=201 Identities=11% Similarity=0.044 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCc
Q 021791 39 VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT 118 (307)
Q Consensus 39 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~ 118 (307)
...+..+...+.. .+++++|.+.|+++.+.. +.+...+..+...+...|++++|.+.++++.+.... +
T Consensus 37 ~~~~~~~a~~~~~----------~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~ 104 (252)
T 2ho1_A 37 RDAYIQLGLGYLQ----------RGNTEQAKVPLRKALEID-PSSADAHAALAVVFQTEMEPKLADEEYRKALASDSR-N 104 (252)
T ss_dssp HHHHHHHHHHHHH----------TTCTGGGHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-C
T ss_pred HHHHHHHHHHHHH----------cCChHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-c
Confidence 4566666677777 566677777777776653 336677777888888888888888888887776432 6
Q ss_pred hhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCC-CHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHH
Q 021791 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP-SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197 (307)
Q Consensus 119 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~ 197 (307)
...+..+...|...|++++|...++++...+..| +...+..+...+...|++++|...+++..+.. +.+...+..+.
T Consensus 105 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~--~~~~~~~~~la 182 (252)
T 2ho1_A 105 ARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLN--RNQPSVALEMA 182 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--SCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--cccHHHHHHHH
Confidence 6777778888888888888888888887632233 45667777788888888888888888887765 45677788888
Q ss_pred HHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
..+...|++++|...++.+.... +.+...+..+...+...|++++|...++++.+.
T Consensus 183 ~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~ 238 (252)
T 2ho1_A 183 DLLYKEREYVPARQYYDLFAQGG-GQNARSLLLGIRLAKVFEDRDTAASYGLQLKRL 238 (252)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTS-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhC-cCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 88888888888888888887754 346677778888888888888888888888775
No 37
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.74 E-value=4.7e-15 Score=111.72 Aligned_cols=206 Identities=9% Similarity=-0.047 Sum_probs=173.5
Q ss_pred CCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHH
Q 021791 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161 (307)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 161 (307)
.+...+..+...+...|++++|.+.++.+.+... .+...+..+...|...|++++|...++++...... +..++..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~ 83 (225)
T 2vq2_A 6 QVSNIKTQLAMEYMRGQDYRQATASIEDALKSDP-KNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYG 83 (225)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCc-cchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHH
Confidence 3566788899999999999999999999988753 36788899999999999999999999999886533 678888999
Q ss_pred HHHhcC-CChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCc
Q 021791 162 KEYRGR-KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240 (307)
Q Consensus 162 ~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~ 240 (307)
..+... |++++|...++++......+.+...+..+...+...|++++|...++.+..... .+...+..+..++...|+
T Consensus 84 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~ 162 (225)
T 2vq2_A 84 WFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQP-QFPPAFKELARTKMLAGQ 162 (225)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHTC
T ss_pred HHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCchHHHHHHHHHHHcCC
Confidence 999999 999999999999988322134577888999999999999999999999887643 367889999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhhcC
Q 021791 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290 (307)
Q Consensus 241 ~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~ 290 (307)
+++|...++++.+.....+...+..+...+...|+.+.+..+++.+.+..
T Consensus 163 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 212 (225)
T 2vq2_A 163 LGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANF 212 (225)
T ss_dssp HHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhC
Confidence 99999999999876321466677777888899999999999999886543
No 38
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.73 E-value=2.4e-15 Score=116.96 Aligned_cols=236 Identities=9% Similarity=0.016 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCC-
Q 021791 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP- 82 (307)
Q Consensus 4 ~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~- 82 (307)
...+......+...|++++|++.|++..+.. +.+...+..+..++.. .|++++|++.+++..+.+..|
T Consensus 3 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-p~~~~~~~~l~~~~~~----------~~~~~~A~~~~~~a~~~~~~~~ 71 (272)
T 3u4t_A 3 DDVEFRYADFLFKNNNYAEAIEVFNKLEAKK-YNSPYIYNRRAVCYYE----------LAKYDLAQKDIETYFSKVNATK 71 (272)
T ss_dssp --CHHHHHHHHHTTTCHHHHHHHHHHHHHTT-CCCSTTHHHHHHHHHH----------TTCHHHHHHHHHHHHTTSCTTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHH----------HhhHHHHHHHHHHHHhccCchh
Confidence 3455667788889999999999999998763 2244578888888888 788899999999988743222
Q ss_pred -CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHH
Q 021791 83 -DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161 (307)
Q Consensus 83 -~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 161 (307)
....|..+...+...|++++|.+.++...+.... +..++..+...|...|++++|...+++..+... .+...+..+.
T Consensus 72 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~-~~~~~~~~l~ 149 (272)
T 3u4t_A 72 AKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTT-RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTT-TDPKVFYELG 149 (272)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSC-CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCC-CcHHHHHHHH
Confidence 2334888889999999999999999998887543 667888999999999999999999998887643 3566777777
Q ss_pred HHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCc---HHHHHHHHHHHhhCC-CCCC------HHhHHHH
Q 021791 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR---MDMVREIWNHVKGSE-LGLD------LDSYTML 231 (307)
Q Consensus 162 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~a~~~~~~~~~~~-~~~~------~~~~~~l 231 (307)
..+...+++++|...+++..+.. +.+...+..+...+...|+ +++|...++.+.+.. -.|+ ..+|..+
T Consensus 150 ~~~~~~~~~~~A~~~~~~a~~~~--p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l 227 (272)
T 3u4t_A 150 QAYYYNKEYVKADSSFVKVLELK--PNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYI 227 (272)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC--ccchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 34444559999999999988875 5567778888888888887 777888877766531 1122 2467778
Q ss_pred HHHHHccCcHHHHHHHHHHHHHc
Q 021791 232 IHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 232 i~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
...|...|++++|...|++.++.
T Consensus 228 ~~~~~~~~~~~~A~~~~~~al~~ 250 (272)
T 3u4t_A 228 AYYYTINRDKVKADAAWKNILAL 250 (272)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhc
Confidence 88888899999999999998876
No 39
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.73 E-value=9.7e-15 Score=109.96 Aligned_cols=212 Identities=8% Similarity=-0.004 Sum_probs=179.3
Q ss_pred cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCC
Q 021791 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP 117 (307)
Q Consensus 38 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~ 117 (307)
+...+..+...+.. .|++++|.+.++++.+.. +.+...+..+...+...|++++|.+.++.+.+... .
T Consensus 7 ~~~~~~~~~~~~~~----------~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~-~ 74 (225)
T 2vq2_A 7 VSNIKTQLAMEYMR----------GQDYRQATASIEDALKSD-PKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKP-D 74 (225)
T ss_dssp HHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-T
T ss_pred cHHHHHHHHHHHHH----------HhhHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC-C
Confidence 45677888888888 788999999999998874 44688899999999999999999999999988753 3
Q ss_pred chhhHHHHHHHHHhc-CChHHHHHHHHHHHhCCCCC-CHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHH
Q 021791 118 TVATYTSVVKCLCSC-GRIEDAEELLGEMVRNGVSP-SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI 195 (307)
Q Consensus 118 ~~~~~~~ll~~~~~~-~~~~~a~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 195 (307)
+..++..+...+... |++++|...++++...+..| +...+..+...+...|++++|...+++..+.. +.+...+..
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~ 152 (225)
T 2vq2_A 75 SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQ--PQFPPAFKE 152 (225)
T ss_dssp CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCchHHHH
Confidence 778899999999999 99999999999998832233 36788889999999999999999999998875 566889999
Q ss_pred HHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHH
Q 021791 196 LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFET 265 (307)
Q Consensus 196 l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ 265 (307)
+...+...|++++|...++.+.......+...+..+...+...|+.++|..+++.+.+. .|+......
T Consensus 153 la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~--~p~~~~~~~ 220 (225)
T 2vq2_A 153 LARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQAN--FPYSEELQT 220 (225)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHh--CCCCHHHHH
Confidence 99999999999999999999888643247778888888889999999999999998865 355444433
No 40
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.71 E-value=1.3e-15 Score=116.24 Aligned_cols=202 Identities=9% Similarity=0.048 Sum_probs=140.5
Q ss_pred CcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCC
Q 021791 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116 (307)
Q Consensus 37 p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~ 116 (307)
.....|..+...+.. .|++++|...|+++.+.. +.+...+..+...+...|++++|.+.++.+.+...
T Consensus 21 ~~~~~~~~~a~~~~~----------~~~~~~A~~~~~~~l~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~- 88 (243)
T 2q7f_A 21 MASMTGGQQMGRGSE----------FGDYEKAAEAFTKAIEEN-KEDAIPYINFANLLSSVNELERALAFYDKALELDS- 88 (243)
T ss_dssp -------------------------------CCTTHHHHHTTC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-
T ss_pred hHHHHHHHHHHHHHH----------hhCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-
Confidence 345566666666666 777788888888877653 34677777788888888888888888888777643
Q ss_pred CchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHH
Q 021791 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNIL 196 (307)
Q Consensus 117 ~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l 196 (307)
.+..++..+...+...|++++|...++++.+.... +...+..+...+...|++++|...+++..... +.+...+..+
T Consensus 89 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~l 165 (243)
T 2q7f_A 89 SAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGME-NGDLFYMLGTVLVKLEQPKLALPYLQRAVELN--ENDTEARFQF 165 (243)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC--TTCHHHHHHH
T ss_pred cchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC--CccHHHHHHH
Confidence 36677778888888888888888888888776433 66777778888888888888888888887764 4567778888
Q ss_pred HHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
...+...|++++|...++.+.... +.+..++..+..+|...|++++|...++++.+.
T Consensus 166 ~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 222 (243)
T 2q7f_A 166 GMCLANEGMLDEALSQFAAVTEQD-PGHADAFYNAGVTYAYKENREKALEMLDKAIDI 222 (243)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHccCHHHHHHHHHHHHcc
Confidence 888888888888888888877663 235777888888888888888888888888775
No 41
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.71 E-value=7e-15 Score=119.36 Aligned_cols=233 Identities=10% Similarity=0.018 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC-chhHHHHHHHHHHcCCCC
Q 021791 39 VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK-PQLSLDKLNFMKEKGICP 117 (307)
Q Consensus 39 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~~a~~~~~~~~~~~~~~ 117 (307)
...|..+...+.. .+++++|++.+++.++.. +-+...|+.+..++...|+ +++|+..+++..+....
T Consensus 97 ~~a~~~lg~~~~~----------~g~~~~Al~~~~~al~l~-P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~- 164 (382)
T 2h6f_A 97 RDVYDYFRAVLQR----------DERSERAFKLTRDAIELN-AANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK- 164 (382)
T ss_dssp HHHHHHHHHHHHH----------TCCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-
T ss_pred HHHHHHHHHHHHH----------CCChHHHHHHHHHHHHhC-ccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-
Confidence 3566777777777 677899999999999874 3478899999999999996 99999999999998654
Q ss_pred chhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHH
Q 021791 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197 (307)
Q Consensus 118 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~ 197 (307)
+...|..+..++...|++++|+..|+++...... +...|..+..++...|++++|+..++++.+.. +.+...|+.+.
T Consensus 165 ~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~-~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~--P~~~~a~~~lg 241 (382)
T 2h6f_A 165 NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAK-NYHAWQHRQWVIQEFKLWDNELQYVDQLLKED--VRNNSVWNQRY 241 (382)
T ss_dssp CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC--TTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC--CCCHHHHHHHH
Confidence 7889999999999999999999999999988655 78899999999999999999999999999986 67889999999
Q ss_pred HHHHh-cCcHHHH-----HHHHHHHhhCCCCCCHHhHHHHHHHHHccC--cHHHHHHHHHHHHHcCCCCcHhhHHHHHHH
Q 021791 198 GMFMA-LNRMDMV-----REIWNHVKGSELGLDLDSYTMLIHGLCEKQ--KWKEACQYFVEMIEKGLLPQKVTFETLYRG 269 (307)
Q Consensus 198 ~~~~~-~~~~~~a-----~~~~~~~~~~~~~~~~~~~~~li~~~~~~g--~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~ 269 (307)
.++.. .|..++| +..++........ +...|..+...+...| ++++|++.+.++ + ....+...+..+...
T Consensus 242 ~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~-~~~a~~~l~~ll~~~g~~~~~~a~~~~~~~-~-~~p~~~~al~~La~~ 318 (382)
T 2h6f_A 242 FVISNTTGYNDRAVLEREVQYTLEMIKLVPH-NESAWNYLKGILQDRGLSKYPNLLNQLLDL-Q-PSHSSPYLIAFLVDI 318 (382)
T ss_dssp HHHHHTTCSCSHHHHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHTTTCGGGCHHHHHHHHHH-T-TTCCCHHHHHHHHHH
T ss_pred HHHHHhcCcchHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHccCccchHHHHHHHHHh-c-cCCCCHHHHHHHHHH
Confidence 99999 6665777 4788888876433 6778999999999888 689999999988 3 234456778888888
Q ss_pred Hhhch---------hHHHHHHHHHHh-hhc
Q 021791 270 LIQSD---------MLRTWRRLKKKL-DEE 289 (307)
Q Consensus 270 ~~~~g---------~~~~a~~~~~~~-~~~ 289 (307)
|.+.| ..++|.++++++ .+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~A~~~~~~l~~~~ 348 (382)
T 2h6f_A 319 YEDMLENQCDNKEDILNKALELCEILAKEK 348 (382)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcccccchHHHHHHHHHHHHHHHHHh
Confidence 88874 358999999998 443
No 42
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.71 E-value=1.9e-15 Score=115.36 Aligned_cols=205 Identities=11% Similarity=0.029 Sum_probs=161.7
Q ss_pred CCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHH
Q 021791 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCF 160 (307)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l 160 (307)
......|..+...+...|++++|...++++.+... .+...+..+...+...|++++|...++++.+.... +...+..+
T Consensus 20 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l 97 (243)
T 2q7f_A 20 HMASMTGGQQMGRGSEFGDYEKAAEAFTKAIEENK-EDAIPYINFANLLSSVNELERALAFYDKALELDSS-AATAYYGA 97 (243)
T ss_dssp ----------------------CCTTHHHHHTTCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-chHHHHHH
Confidence 34566788888899999999999999999988653 37888999999999999999999999999887543 77889999
Q ss_pred HHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCc
Q 021791 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK 240 (307)
Q Consensus 161 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~ 240 (307)
...+...|++++|...+++..+.. +.+...+..+...+...|++++|...++.+.... +.+...+..+...+...|+
T Consensus 98 a~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ 174 (243)
T 2q7f_A 98 GNVYVVKEMYKEAKDMFEKALRAG--MENGDLFYMLGTVLVKLEQPKLALPYLQRAVELN-ENDTEARFQFGMCLANEGM 174 (243)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHT--CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhccHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHcCC
Confidence 999999999999999999998876 5678889999999999999999999999988764 3378889999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhhcCC
Q 021791 241 WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291 (307)
Q Consensus 241 ~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~~ 291 (307)
+++|...++++.+.. +.+..++..+...+...|++++|...+++..+...
T Consensus 175 ~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p 224 (243)
T 2q7f_A 175 LDEALSQFAAVTEQD-PGHADAFYNAGVTYAYKENREKALEMLDKAIDIQP 224 (243)
T ss_dssp CHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHccCHHHHHHHHHHHHccCc
Confidence 999999999998873 34577889999999999999999999999876543
No 43
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.71 E-value=3.7e-15 Score=115.81 Aligned_cols=235 Identities=10% Similarity=-0.025 Sum_probs=190.0
Q ss_pred HHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCc--
Q 021791 41 TYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT-- 118 (307)
Q Consensus 41 ~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~-- 118 (307)
.+......+.. .|++++|+..|++..+.. +.+...+..+..++...|++++|.+.++...+.+..++
T Consensus 5 ~~~~~a~~~~~----------~~~~~~A~~~~~~~l~~~-p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 73 (272)
T 3u4t_A 5 VEFRYADFLFK----------NNNYAEAIEVFNKLEAKK-YNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAK 73 (272)
T ss_dssp CHHHHHHHHHT----------TTCHHHHHHHHHHHHHTT-CCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCC
T ss_pred HHHHHHHHHHH----------hcCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHH
Confidence 34445556666 788999999999998874 33556888999999999999999999999988432222
Q ss_pred hhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHH
Q 021791 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198 (307)
Q Consensus 119 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (307)
..+|..+...+...|++++|...|++..+.... +..++..+...|...|++++|...+++..+.. +.+..++..+..
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~--~~~~~~~~~l~~ 150 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTT-RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPT--TTDPKVFYELGQ 150 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSS--CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcC--CCcHHHHHHHHH
Confidence 234889999999999999999999999987544 66889999999999999999999999999875 667788888883
Q ss_pred HHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCc---HHHHHHHHHHHHHcC-CCCc------HhhHHHHHH
Q 021791 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK---WKEACQYFVEMIEKG-LLPQ------KVTFETLYR 268 (307)
Q Consensus 199 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~---~~~a~~~~~~~~~~~-~~p~------~~~~~~l~~ 268 (307)
.+...+++++|.+.++.+.+... .+...+..+..++...|+ +++|...+++..+.. -.|+ ..++..+..
T Consensus 151 ~~~~~~~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~ 229 (272)
T 3u4t_A 151 AYYYNKEYVKADSSFVKVLELKP-NIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAY 229 (272)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCc-cchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHH
Confidence 44455699999999999988742 257778888888888888 888999999887652 1233 246778888
Q ss_pred HHhhchhHHHHHHHHHHhhhcC
Q 021791 269 GLIQSDMLRTWRRLKKKLDEES 290 (307)
Q Consensus 269 ~~~~~g~~~~a~~~~~~~~~~~ 290 (307)
.|...|++++|.+.+++..+..
T Consensus 230 ~~~~~~~~~~A~~~~~~al~~~ 251 (272)
T 3u4t_A 230 YYTINRDKVKADAAWKNILALD 251 (272)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHHHHHhcC
Confidence 9999999999999999987654
No 44
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.71 E-value=6.5e-14 Score=108.99 Aligned_cols=225 Identities=11% Similarity=-0.016 Sum_probs=195.3
Q ss_pred cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCCchhHHHHHHHHHHc
Q 021791 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR----AHKPQLSLDKLNFMKEK 113 (307)
Q Consensus 38 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~~~~a~~~~~~~~~~ 113 (307)
+..++..+-..+.. .+++++|.+.|++..+.+ +...+..+...+.. .+++++|.+.|++..+.
T Consensus 5 ~~~a~~~lg~~~~~----------~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~ 71 (273)
T 1ouv_A 5 DPKELVGLGAKSYK----------EKDFTQAKKYFEKACDLK---ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 71 (273)
T ss_dssp CHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC
Confidence 45667777777777 778999999999998843 56788889999999 99999999999999988
Q ss_pred CCCCchhhHHHHHHHHHh----cCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhc----CCChhHHHHHHHHHhhcCC
Q 021791 114 GICPTVATYTSVVKCLCS----CGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRG----RKDANGAMKLYRQMKEDDL 185 (307)
Q Consensus 114 ~~~~~~~~~~~ll~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~a~~~~~~~~~~~~ 185 (307)
+ +...+..+...|.. .+++++|...|++..+.+ +...+..+...|.. .+++++|...+++..+.+
T Consensus 72 ~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~- 144 (273)
T 1ouv_A 72 N---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN- 144 (273)
T ss_dssp T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT-
T ss_pred C---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC-
Confidence 6 77888899999999 999999999999999874 77888899999998 999999999999999864
Q ss_pred CCccHHHHHHHHHHHHh----cCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHc----cCcHHHHHHHHHHHHHcCCC
Q 021791 186 CVPNIHTYNILIGMFMA----LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCE----KQKWKEACQYFVEMIEKGLL 257 (307)
Q Consensus 186 ~~~~~~~~~~l~~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~----~g~~~~a~~~~~~~~~~~~~ 257 (307)
+...+..+...|.. .+++++|.+.++...+.+ +...+..+...|.. .+++++|...|++..+.+
T Consensus 145 ---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~-- 216 (273)
T 1ouv_A 145 ---DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK---DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELE-- 216 (273)
T ss_dssp ---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTT--
T ss_pred ---cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCC--
Confidence 45677888888888 999999999999998874 67788889999999 999999999999999875
Q ss_pred CcHhhHHHHHHHHhh----chhHHHHHHHHHHhhhcCC
Q 021791 258 PQKVTFETLYRGLIQ----SDMLRTWRRLKKKLDEESI 291 (307)
Q Consensus 258 p~~~~~~~l~~~~~~----~g~~~~a~~~~~~~~~~~~ 291 (307)
+...+..+...|.. .++.++|.+.+++..+.+.
T Consensus 217 -~~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~ 253 (273)
T 1ouv_A 217 -NGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGA 253 (273)
T ss_dssp -CHHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTC
T ss_pred -CHHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCC
Confidence 25677778888888 9999999999999877664
No 45
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.70 E-value=1.5e-13 Score=106.91 Aligned_cols=228 Identities=11% Similarity=0.019 Sum_probs=194.3
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCC
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 82 (307)
++.++..+...+...|++++|.+.|++..+.+ +...+..+-..+.. |... .+++++|...|++..+.+
T Consensus 5 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~-g~~~-----~~~~~~A~~~~~~a~~~~--- 72 (273)
T 1ouv_A 5 DPKELVGLGAKSYKEKDFTQAKKYFEKACDLK---ENSGCFNLGVLYYQ-GQGV-----EKNLKKAASFYAKACDLN--- 72 (273)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHH-TSSS-----CCCHHHHHHHHHHHHHTT---
T ss_pred ChHHHHHHHHHHHhCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHc-CCCc-----CCCHHHHHHHHHHHHHCC---
Confidence 56788889999999999999999999998832 44566666666655 1100 456799999999998876
Q ss_pred CHHHHHHHHHHHHh----cCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHh----cCChHHHHHHHHHHHhCCCCCCH
Q 021791 83 DVTSFSIVLHVYSR----AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCS----CGRIEDAEELLGEMVRNGVSPSA 154 (307)
Q Consensus 83 ~~~~~~~ll~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~~~~a~~~~~~~~~~~~~~~~ 154 (307)
+...+..+...|.. .+++++|.+.|++..+.+ +...+..+...|.. .+++++|...|++..+.+ +.
T Consensus 73 ~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~ 146 (273)
T 1ouv_A 73 YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN---DG 146 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT---CH
T ss_pred CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC---cH
Confidence 78888999999999 999999999999999875 77889999999999 999999999999999875 56
Q ss_pred hhHHHHHHHHhc----CCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHh----cCcHHHHHHHHHHHhhCCCCCCHH
Q 021791 155 ETYNCFFKEYRG----RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA----LNRMDMVREIWNHVKGSELGLDLD 226 (307)
Q Consensus 155 ~~~~~l~~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~ 226 (307)
..+..+...|.. .+++++|...+++..+.+ +...+..+...|.. .+++++|.+.++...+.+ +..
T Consensus 147 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~----~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~ 219 (273)
T 1ouv_A 147 DGCTILGSLYDAGRGTPKDLKKALASYDKACDLK----DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELE---NGG 219 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTT---CHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC----CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCC---CHH
Confidence 778888888887 999999999999998764 45778888999999 999999999999998874 477
Q ss_pred hHHHHHHHHHc----cCcHHHHHHHHHHHHHcC
Q 021791 227 SYTMLIHGLCE----KQKWKEACQYFVEMIEKG 255 (307)
Q Consensus 227 ~~~~li~~~~~----~g~~~~a~~~~~~~~~~~ 255 (307)
.+..+...|.. .+++++|...|++..+.|
T Consensus 220 a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~ 252 (273)
T 1ouv_A 220 GCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 252 (273)
T ss_dssp HHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcC
Confidence 88888889988 999999999999999875
No 46
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.69 E-value=3.4e-14 Score=119.25 Aligned_cols=218 Identities=9% Similarity=0.001 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHH
Q 021791 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP-QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEE 140 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~ 140 (307)
.+.++++++.+++..... +.+...+..+...+...|++ ++|++.|++..+.... +...|..+..+|...|++++|..
T Consensus 81 ~~~~~~al~~l~~~~~~~-~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~ 158 (474)
T 4abn_A 81 QEEMEKTLQQMEEVLGSA-QVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHT 158 (474)
T ss_dssp HHHHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHhccC-chhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHH
Confidence 566788888888776552 44788999999999999999 9999999999887543 68899999999999999999999
Q ss_pred HHHHHHhCCCCCCHhhHHHHHHHHhcC---------CChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhc--------
Q 021791 141 LLGEMVRNGVSPSAETYNCFFKEYRGR---------KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL-------- 203 (307)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------- 203 (307)
.|++..+.. |+...+..+...+... |++++|...+++..+.. +.+...|..+..+|...
T Consensus 159 ~~~~al~~~--p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~~~~~~~~~ 234 (474)
T 4abn_A 159 CFSGALTHC--KNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMD--VLDGRSWYILGNAYLSLYFNTGQNP 234 (474)
T ss_dssp HHHHHHTTC--CCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHhhC--CCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHHHhhcccc
Confidence 999999864 6678899999999999 99999999999999886 66788999999999999
Q ss_pred CcHHHHHHHHHHHhhCCCC--CCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHH
Q 021791 204 NRMDMVREIWNHVKGSELG--LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 281 (307)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~~--~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~ 281 (307)
|++++|.+.+++....... -+...|..+..+|...|++++|...|++..+.. +-+...+..+...+...|+.++|.+
T Consensus 235 g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~-p~~~~a~~~l~~~~~~lg~~~eAi~ 313 (474)
T 4abn_A 235 KISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALD-PAWPEPQQREQQLLEFLSRLTSLLE 313 (474)
T ss_dssp HHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999886320 378899999999999999999999999998863 3355678888899999999999987
Q ss_pred HHHHh
Q 021791 282 LKKKL 286 (307)
Q Consensus 282 ~~~~~ 286 (307)
.+.++
T Consensus 314 ~~~~~ 318 (474)
T 4abn_A 314 SKGKT 318 (474)
T ss_dssp HTTTC
T ss_pred Hhccc
Confidence 66544
No 47
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.69 E-value=9.8e-15 Score=113.54 Aligned_cols=222 Identities=8% Similarity=-0.091 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHHHHHhcCC---CCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHH
Q 021791 62 EKTIRNAEKVFDEMRVRGI---EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDA 138 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~---~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a 138 (307)
.+++++|+..|+++.+... +.+..++..+...+...|++++|...|+++.+.... +..++..+...|...|++++|
T Consensus 18 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A 96 (275)
T 1xnf_A 18 TLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAA 96 (275)
T ss_dssp CHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHH
T ss_pred cchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHH
Confidence 6899999999999988632 124678889999999999999999999999987543 788999999999999999999
Q ss_pred HHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhh
Q 021791 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218 (307)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~ 218 (307)
...|+++...... +...+..+...+...|++++|...++++.+.. |+.......+..+...|++++|...++....
T Consensus 97 ~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 172 (275)
T 1xnf_A 97 YEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD---PNDPFRSLWLYLAEQKLDEKQAKEVLKQHFE 172 (275)
T ss_dssp HHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TTCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhC---CCChHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 9999999987543 67889999999999999999999999999874 4433444455556778999999999988776
Q ss_pred CCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCC--C-cHhhHHHHHHHHhhchhHHHHHHHHHHhhhcC
Q 021791 219 SELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL--P-QKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290 (307)
Q Consensus 219 ~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~--p-~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~ 290 (307)
.. +++...+ .++..+...++.++|...+++..+.... | +..++..+...+...|++++|...+++..+..
T Consensus 173 ~~-~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 245 (275)
T 1xnf_A 173 KS-DKEQWGW-NIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANN 245 (275)
T ss_dssp HS-CCCSTHH-HHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred cC-CcchHHH-HHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCC
Confidence 53 3344444 4777788888899999999988654211 1 14678889999999999999999999987765
No 48
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.68 E-value=1.7e-15 Score=125.02 Aligned_cols=274 Identities=10% Similarity=-0.012 Sum_probs=207.9
Q ss_pred HHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcH----HHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhc--
Q 021791 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNV----VTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR-- 78 (307)
Q Consensus 5 ~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~----~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-- 78 (307)
..+..+...+...|++++|...|++..+.+.. +. ..+..+...+.. .|++++|...+++..+.
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~----------~g~~~~A~~~~~~al~~~~ 117 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFY----------LGDYNKAMQYHKHDLTLAK 117 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHH----------CCCHHHHHHHHHHHHHHHH
Confidence 44556778889999999999999999887322 22 467788888888 77888888888877653
Q ss_pred --C-CCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHc----C-CCCchhhHHHHHHHHHhcCC----------------
Q 021791 79 --G-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK----G-ICPTVATYTSVVKCLCSCGR---------------- 134 (307)
Q Consensus 79 --~-~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~----~-~~~~~~~~~~ll~~~~~~~~---------------- 134 (307)
+ .+.....+..+...+...|++++|...+++..+. + ......++..+...|...|+
T Consensus 118 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~ 197 (411)
T 4a1s_A 118 SMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKE 197 (411)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHH
T ss_pred HccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhH
Confidence 1 1224567888999999999999999999887654 1 12235578889999999999
Q ss_pred -hHHHHHHHHHHHhC----CCC-CCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCcc----HHHHHHHHHHHHhcC
Q 021791 135 -IEDAEELLGEMVRN----GVS-PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN----IHTYNILIGMFMALN 204 (307)
Q Consensus 135 -~~~a~~~~~~~~~~----~~~-~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~ 204 (307)
+++|...+++.... +.. ....++..+...+...|++++|...+++..+.....++ ..++..+...+...|
T Consensus 198 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 277 (411)
T 4a1s_A 198 ALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLG 277 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCc
Confidence 99999998887542 111 12347788889999999999999999988764210111 237888999999999
Q ss_pred cHHHHHHHHHHHhhCCCC-----CCHHhHHHHHHHHHccCcHHHHHHHHHHHHHc----CCC-CcHhhHHHHHHHHhhch
Q 021791 205 RMDMVREIWNHVKGSELG-----LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK----GLL-PQKVTFETLYRGLIQSD 274 (307)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~-----~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~----~~~-p~~~~~~~l~~~~~~~g 274 (307)
++++|...+++....... ....++..+...|...|++++|...+++.++. +.. ....++..+...+...|
T Consensus 278 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 357 (411)
T 4a1s_A 278 QFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIG 357 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhc
Confidence 999999999887653111 11457888899999999999999999998764 111 11346788889999999
Q ss_pred hHHHHHHHHHHhhhc
Q 021791 275 MLRTWRRLKKKLDEE 289 (307)
Q Consensus 275 ~~~~a~~~~~~~~~~ 289 (307)
+.++|.+.+++..+.
T Consensus 358 ~~~~A~~~~~~al~~ 372 (411)
T 4a1s_A 358 GHERALKYAEQHLQL 372 (411)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH
Confidence 999999999887543
No 49
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.65 E-value=5.2e-15 Score=118.24 Aligned_cols=276 Identities=11% Similarity=-0.003 Sum_probs=206.3
Q ss_pred HHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCc----HHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhc-
Q 021791 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPN----VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR- 78 (307)
Q Consensus 4 ~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~----~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~- 78 (307)
...+......+...|++++|...|+++.+.... + ...+..+...+.. .|++++|.+.+++..+.
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~----------~g~~~~A~~~~~~al~~~ 73 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFY----------LHDYAKALEYHHHDLTLA 73 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHHh
Confidence 345566778889999999999999999887322 2 3567788888888 67788888888776543
Q ss_pred ---CCC-CCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCC-CCc----hhhHHHHHHHHHhcCC---------------
Q 021791 79 ---GIE-PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI-CPT----VATYTSVVKCLCSCGR--------------- 134 (307)
Q Consensus 79 ---~~~-~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~-~~~----~~~~~~ll~~~~~~~~--------------- 134 (307)
+.. ....++..+...+...|++++|...+++..+... .++ ..++..+...+...|+
T Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T 3ro2_A 74 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPE 153 (338)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCH
T ss_pred hcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhh
Confidence 212 2355788889999999999999999988765411 112 3478888899999999
Q ss_pred -----hHHHHHHHHHHHhC----CCC-CCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCC----CCccHHHHHHHHHHH
Q 021791 135 -----IEDAEELLGEMVRN----GVS-PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL----CVPNIHTYNILIGMF 200 (307)
Q Consensus 135 -----~~~a~~~~~~~~~~----~~~-~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~l~~~~ 200 (307)
+++|...+++.... +.. .....+..+...+...|++++|...+++..+... ......++..+...+
T Consensus 154 ~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~ 233 (338)
T 3ro2_A 154 DVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAY 233 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Confidence 99999998876542 111 1234677888899999999999999998865421 011234788889999
Q ss_pred HhcCcHHHHHHHHHHHhhCCCC-CC----HHhHHHHHHHHHccCcHHHHHHHHHHHHHc----CCCC-cHhhHHHHHHHH
Q 021791 201 MALNRMDMVREIWNHVKGSELG-LD----LDSYTMLIHGLCEKQKWKEACQYFVEMIEK----GLLP-QKVTFETLYRGL 270 (307)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~-~~----~~~~~~li~~~~~~g~~~~a~~~~~~~~~~----~~~p-~~~~~~~l~~~~ 270 (307)
...|++++|...++........ .+ ..++..+...+...|++++|...+++..+. +..+ ...++..+...+
T Consensus 234 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~ 313 (338)
T 3ro2_A 234 IFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAY 313 (338)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 9999999999999887643111 11 456788889999999999999999988764 1111 134677888999
Q ss_pred hhchhHHHHHHHHHHhhhcC
Q 021791 271 IQSDMLRTWRRLKKKLDEES 290 (307)
Q Consensus 271 ~~~g~~~~a~~~~~~~~~~~ 290 (307)
...|++++|...+++..+..
T Consensus 314 ~~~g~~~~A~~~~~~a~~~~ 333 (338)
T 3ro2_A 314 TALGNHDQAMHFAEKHLEIS 333 (338)
T ss_dssp HHHTCHHHHHHHHHHHHHC-
T ss_pred HHcCChHHHHHHHHHHHHHH
Confidence 99999999999999986654
No 50
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.65 E-value=9.6e-14 Score=101.33 Aligned_cols=167 Identities=16% Similarity=0.086 Sum_probs=130.5
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHH
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~ 162 (307)
++.+|..+...+...|++++|++.|++..+.... +..++..+..+|.+.|++++|...++........ +...+..+..
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~ 81 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPN-NVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGS 81 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHH
Confidence 5667888888888888888888888888777543 6777888888888888888888888887776443 5667777777
Q ss_pred HHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHH
Q 021791 163 EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242 (307)
Q Consensus 163 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~ 242 (307)
.+...++++.+...+.+..... +.+...+..+...+...|++++|++.+++..+... .+..+|..+..+|.+.|+++
T Consensus 82 ~~~~~~~~~~a~~~~~~a~~~~--~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p-~~~~~~~~lg~~~~~~g~~~ 158 (184)
T 3vtx_A 82 ANFMIDEKQAAIDALQRAIALN--TVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKP-GFIRAYQSIGLAYEGKGLRD 158 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhC--ccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcc-hhhhHHHHHHHHHHHCCCHH
Confidence 7888888888888888877765 55677788888888888888888888888777642 36777888888888888888
Q ss_pred HHHHHHHHHHHc
Q 021791 243 EACQYFVEMIEK 254 (307)
Q Consensus 243 ~a~~~~~~~~~~ 254 (307)
+|+..|++.++.
T Consensus 159 ~A~~~~~~al~~ 170 (184)
T 3vtx_A 159 EAVKYFKKALEK 170 (184)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhC
Confidence 888888888764
No 51
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.65 E-value=6e-13 Score=105.42 Aligned_cols=244 Identities=9% Similarity=-0.040 Sum_probs=187.9
Q ss_pred cHHHHHHHHHHHHhc----Cch----hhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhh-------CCCCcchhhHHHHHH
Q 021791 3 NVKMYTSLIYGWCKI----NRI----DMAERFLGEMIERGVEPNVVTYNVLLNGVCRR-------ASLHPNERFEKTIRN 67 (307)
Q Consensus 3 ~~~~~~~li~~~~~~----g~~----~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~-------~~~~~~~~~~~~~~~ 67 (307)
+...|...+..-.+. ++. ++|..+|++.+... +-+...|..+...+... |+... ..+..++
T Consensus 7 ~~~~W~~yi~~E~~~~~~~~~~~~~~~~a~~~~~~al~~~-p~~~~~w~~~~~~~~~~~~~l~~~g~~~~---~~~~~~~ 82 (308)
T 2ond_A 7 QVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVL-GHHPDIWYEAAQYLEQSSKLLAEKGDMNN---AKLFSDE 82 (308)
T ss_dssp HHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHTSCCHH---HHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccCCchHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHhchhhhhccchhh---cccchHH
Confidence 456677777766554 233 68889999998862 34667888887776542 33211 1345689
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchh-hHHHHHHHHHhcCChHHHHHHHHHHH
Q 021791 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA-TYTSVVKCLCSCGRIEDAEELLGEMV 146 (307)
Q Consensus 68 a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~ll~~~~~~~~~~~a~~~~~~~~ 146 (307)
|..+|++..+.-.+-+...|..++..+.+.|++++|.++|++..+.... +.. +|..++..+.+.|++++|..+|++..
T Consensus 83 A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 161 (308)
T 2ond_A 83 AANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAR 161 (308)
T ss_dssp HHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSS-CTHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 9999999987312336678999999999999999999999999986322 343 79999999999999999999999998
Q ss_pred hCCCCCCHhhHHHHHHHH-hcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCC-CCC-
Q 021791 147 RNGVSPSAETYNCFFKEY-RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE-LGL- 223 (307)
Q Consensus 147 ~~~~~~~~~~~~~l~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~-~~~- 223 (307)
+... ++...|....... ...|++++|..+|+...+.. +.+...|..++..+.+.|+.++|..+|++..... ..|
T Consensus 162 ~~~p-~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~ 238 (308)
T 2ond_A 162 EDAR-TRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKY--GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE 238 (308)
T ss_dssp TSTT-CCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGG
T ss_pred hcCC-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHH
Confidence 8653 3455555444332 23799999999999998875 5678889999999999999999999999999863 344
Q ss_pred -CHHhHHHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 224 -DLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 224 -~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
....|..++....+.|+.++|..+++++.+.
T Consensus 239 ~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~~ 270 (308)
T 2ond_A 239 KSGEIWARFLAFESNIGDLASILKVEKRRFTA 270 (308)
T ss_dssp GCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4667888899999999999999999999876
No 52
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.65 E-value=3e-13 Score=107.14 Aligned_cols=221 Identities=9% Similarity=0.009 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHH-------hcCCc-------hhHHHHHHHHHHcCCCCchhhHHHHHHHHHh
Q 021791 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYS-------RAHKP-------QLSLDKLNFMKEKGICPTVATYTSVVKCLCS 131 (307)
Q Consensus 66 ~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~-------~~~~~-------~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~ 131 (307)
++|..+|++..... +.+...|..++..+. +.|+. ++|..+|++..+.-.+-+...|..++..+.+
T Consensus 33 ~~a~~~~~~al~~~-p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~ 111 (308)
T 2ond_A 33 KRVMFAYEQCLLVL-GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEES 111 (308)
T ss_dssp HHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHh
Confidence 67888898888763 457788888888776 35886 8999999999884122366789999999999
Q ss_pred cCChHHHHHHHHHHHhCCCCCCHh-hHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHH-hcCcHHHH
Q 021791 132 CGRIEDAEELLGEMVRNGVSPSAE-TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM-ALNRMDMV 209 (307)
Q Consensus 132 ~~~~~~a~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~a 209 (307)
.|++++|..+|++..+.... +.. .|..+...+.+.|++++|..+|++..+.. +++...|........ ..|+.++|
T Consensus 112 ~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~--p~~~~~~~~~a~~~~~~~~~~~~A 188 (308)
T 2ond_A 112 RMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDA--RTRHHVYVTAALMEYYCSKDKSVA 188 (308)
T ss_dssp TTCHHHHHHHHHHHHTSSSS-CTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTST--TCCTHHHHHHHHHHHHTSCCHHHH
T ss_pred cCCHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCHHHH
Confidence 99999999999999985332 333 89999999999999999999999999875 455556654444432 36999999
Q ss_pred HHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcC-CCCc--HhhHHHHHHHHhhchhHHHHHHHHHHh
Q 021791 210 REIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG-LLPQ--KVTFETLYRGLIQSDMLRTWRRLKKKL 286 (307)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~p~--~~~~~~l~~~~~~~g~~~~a~~~~~~~ 286 (307)
.++|+...+... -+...|..++..+.+.|++++|..+|++.++.. +.|+ ...|..++....+.|+.+.|..++++.
T Consensus 189 ~~~~~~al~~~p-~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a 267 (308)
T 2ond_A 189 FKIFELGLKKYG-DIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRR 267 (308)
T ss_dssp HHHHHHHHHHHT-TCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999999987643 378889999999999999999999999999863 4553 457888888899999999999999998
Q ss_pred hhcCC
Q 021791 287 DEESI 291 (307)
Q Consensus 287 ~~~~~ 291 (307)
.+...
T Consensus 268 ~~~~p 272 (308)
T 2ond_A 268 FTAFR 272 (308)
T ss_dssp HHHTT
T ss_pred HHHcc
Confidence 76544
No 53
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.65 E-value=6.5e-15 Score=121.04 Aligned_cols=275 Identities=11% Similarity=-0.004 Sum_probs=207.6
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCc----HHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhc
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPN----VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~----~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 78 (307)
....+......+...|++++|...|++..+.+.. + ...+..+...+.. .|++++|...+++....
T Consensus 8 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~----------~g~~~~A~~~~~~al~~ 76 (406)
T 3sf4_A 8 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFY----------LHDYAKALEYHHHDLTL 76 (406)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHH----------hcCHHHHHHHHHHHHHH
Confidence 3456677888999999999999999999887322 2 3567778888888 77788888888876543
Q ss_pred ----CCCC-CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCC-----CCchhhHHHHHHHHHhcCC--------------
Q 021791 79 ----GIEP-DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI-----CPTVATYTSVVKCLCSCGR-------------- 134 (307)
Q Consensus 79 ----~~~~-~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~~~-------------- 134 (307)
+..| ...++..+...+...|++++|...+++..+... .....++..+...|...|+
T Consensus 77 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~ 156 (406)
T 3sf4_A 77 ARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFP 156 (406)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCC
T ss_pred HHhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhh
Confidence 2122 255788889999999999999999988765411 1114478888999999999
Q ss_pred ------hHHHHHHHHHHHhC----CCCC-CHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCc----cHHHHHHHHHH
Q 021791 135 ------IEDAEELLGEMVRN----GVSP-SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP----NIHTYNILIGM 199 (307)
Q Consensus 135 ------~~~a~~~~~~~~~~----~~~~-~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~~~~~~l~~~ 199 (307)
+++|...+++.... +..+ ...++..+...+...|++++|...+++........+ ...++..+...
T Consensus 157 ~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~ 236 (406)
T 3sf4_A 157 EEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNA 236 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 99999999876542 1111 234678888999999999999999998875421011 23478889999
Q ss_pred HHhcCcHHHHHHHHHHHhhCCCC-CC----HHhHHHHHHHHHccCcHHHHHHHHHHHHHc----CCCC-cHhhHHHHHHH
Q 021791 200 FMALNRMDMVREIWNHVKGSELG-LD----LDSYTMLIHGLCEKQKWKEACQYFVEMIEK----GLLP-QKVTFETLYRG 269 (307)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~-~~----~~~~~~li~~~~~~g~~~~a~~~~~~~~~~----~~~p-~~~~~~~l~~~ 269 (307)
+...|++++|...++........ .+ ..++..+...|...|++++|...+++..+. +..+ ...++..+...
T Consensus 237 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~ 316 (406)
T 3sf4_A 237 YIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNA 316 (406)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 99999999999999887643111 11 457888899999999999999999998764 1111 14567888889
Q ss_pred HhhchhHHHHHHHHHHhhh
Q 021791 270 LIQSDMLRTWRRLKKKLDE 288 (307)
Q Consensus 270 ~~~~g~~~~a~~~~~~~~~ 288 (307)
+...|++++|.+.+++..+
T Consensus 317 ~~~~g~~~~A~~~~~~al~ 335 (406)
T 3sf4_A 317 YTALGNHDQAMHFAEKHLE 335 (406)
T ss_dssp HHHHTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHH
Confidence 9999999999999988654
No 54
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.63 E-value=6.2e-12 Score=106.17 Aligned_cols=208 Identities=12% Similarity=0.056 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHh----cCCh
Q 021791 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR----AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCS----CGRI 135 (307)
Q Consensus 64 ~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~~ 135 (307)
+.++|.++|++..+.| +...+..+...|.. .+++++|.++|+...+.| +...+..+...|.. .++.
T Consensus 202 ~~~~A~~~~~~a~~~~---~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~y~~g~~~~~d~ 275 (490)
T 2xm6_A 202 NDAISAQWYRKSATSG---DELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQG---NSIAQFRLGYILEQGLAGAKEP 275 (490)
T ss_dssp CHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTTT---CHHHHHHHHHHHHHTTTSSCCH
T ss_pred CHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHCCCCCCCCH
Confidence 3444555555444433 33344444444443 445555555555554442 33344444444544 5566
Q ss_pred HHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcC-----CChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcC---cHH
Q 021791 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRGR-----KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN---RMD 207 (307)
Q Consensus 136 ~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~ 207 (307)
++|...|++..+.| +...+..+...|... +++++|...+++..+.+ +...+..+...|...| +.+
T Consensus 276 ~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~----~~~a~~~lg~~y~~~g~~~~~~ 348 (490)
T 2xm6_A 276 LKALEWYRKSAEQG---NSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQG----DATAQANLGAIYFRLGSEEEHK 348 (490)
T ss_dssp HHHHHHHHHHHTTT---CHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHSCCHHHHH
T ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcC----CHHHHHHHHHHHHhCCCcccHH
Confidence 66666666555432 334445555555554 56666666666665543 2344555555555544 566
Q ss_pred HHHHHHHHHhhCCCCCCHHhHHHHHHHHHc----cCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhh----chhHHHH
Q 021791 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCE----KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQ----SDMLRTW 279 (307)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~~~~li~~~~~----~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~----~g~~~~a 279 (307)
+|.+.++...+.+ +...+..+...|.. .+++++|...|++..+.| ++..+..+...|.. .++.++|
T Consensus 349 ~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~---~~~a~~~Lg~~y~~g~g~~~d~~~A 422 (490)
T 2xm6_A 349 KAVEWFRKAAAKG---EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG---LSAAQVQLGEIYYYGLGVERDYVQA 422 (490)
T ss_dssp HHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHH
T ss_pred HHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC---CHHHHHHHHHHHHcCCCCCCCHHHH
Confidence 6777776666653 55666666666666 677777777777777654 34556666666665 6777777
Q ss_pred HHHHHHhhhcC
Q 021791 280 RRLKKKLDEES 290 (307)
Q Consensus 280 ~~~~~~~~~~~ 290 (307)
...+++..+.+
T Consensus 423 ~~~~~~A~~~~ 433 (490)
T 2xm6_A 423 WAWFDTASTND 433 (490)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHCC
Confidence 77777766554
No 55
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.62 E-value=1.3e-11 Score=104.19 Aligned_cols=175 Identities=12% Similarity=0.034 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHh----cCCh
Q 021791 64 TIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR----AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCS----CGRI 135 (307)
Q Consensus 64 ~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~~ 135 (307)
++++|.+.|++..+.| +...+..|...|.. .++.++|.+.|++..+.| +...+..+...|.. .++.
T Consensus 130 ~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~ 203 (490)
T 2xm6_A 130 DKAESVKWFRLAAEQG---RDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG---NVWSCNQLGYMYSRGLGVERND 203 (490)
T ss_dssp CHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCH
T ss_pred CHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhcCCCCCcCH
Confidence 3445555555544443 33344444444443 444555555555444432 33444444444444 4455
Q ss_pred HHHHHHHHHHHhCCCCCCHhhHHHHHHHHhc----CCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHh----cCcHH
Q 021791 136 EDAEELLGEMVRNGVSPSAETYNCFFKEYRG----RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA----LNRMD 207 (307)
Q Consensus 136 ~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~ 207 (307)
++|...|++..+.+ +...+..+...|.. .+++++|...|++..+.+ +...+..+...|.. .++.+
T Consensus 204 ~~A~~~~~~a~~~~---~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~~----~~~a~~~lg~~y~~g~~~~~d~~ 276 (490)
T 2xm6_A 204 AISAQWYRKSATSG---DELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQG----NSIAQFRLGYILEQGLAGAKEPL 276 (490)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTTT----CHHHHHHHHHHHHHTTTSSCCHH
T ss_pred HHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC----CHHHHHHHHHHHHCCCCCCCCHH
Confidence 55555555444432 23333334433332 344444444444444332 12233333333333 44444
Q ss_pred HHHHHHHHHhhCCCCCCHHhHHHHHHHHHcc-----CcHHHHHHHHHHHHHc
Q 021791 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEK-----QKWKEACQYFVEMIEK 254 (307)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~-----g~~~~a~~~~~~~~~~ 254 (307)
+|.+.++...+.+ +...+..+...|... +++++|...|++..+.
T Consensus 277 ~A~~~~~~a~~~~---~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~ 325 (490)
T 2xm6_A 277 KALEWYRKSAEQG---NSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQ 325 (490)
T ss_dssp HHHHHHHHHHTTT---CHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcC---CHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhc
Confidence 4444444444332 233333333333333 4444444444444433
No 56
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.62 E-value=2.5e-13 Score=99.11 Aligned_cols=168 Identities=13% Similarity=0.068 Sum_probs=149.6
Q ss_pred chhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHH
Q 021791 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197 (307)
Q Consensus 118 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~ 197 (307)
+..+|..+...|...|++++|+..|++..+..+. +..++..+..+|.+.|++++|...+....... +.+...+..+.
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~ 80 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPN-NVETLLKLGKTYMDIGLPNDAIESLKKFVVLD--TTSAEAYYILG 80 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC--chhHHHHHHHH
Confidence 6778999999999999999999999999987654 78899999999999999999999999998876 56778888889
Q ss_pred HHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHH
Q 021791 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277 (307)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~ 277 (307)
..+...++++.+...+........ .+...+..+..+|...|++++|+..|++.++.. +.+..++..+..++.+.|+++
T Consensus 81 ~~~~~~~~~~~a~~~~~~a~~~~~-~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~lg~~~~~~g~~~ 158 (184)
T 3vtx_A 81 SANFMIDEKQAAIDALQRAIALNT-VYADAYYKLGLVYDSMGEHDKAIEAYEKTISIK-PGFIRAYQSIGLAYEGKGLRD 158 (184)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCc-cchHHHHHHHHHHHHhCCchhHHHHHHHHHHhc-chhhhHHHHHHHHHHHCCCHH
Confidence 999999999999999999887643 378889999999999999999999999999873 346778999999999999999
Q ss_pred HHHHHHHHhhhcC
Q 021791 278 TWRRLKKKLDEES 290 (307)
Q Consensus 278 ~a~~~~~~~~~~~ 290 (307)
+|.+.+++..+..
T Consensus 159 ~A~~~~~~al~~~ 171 (184)
T 3vtx_A 159 EAVKYFKKALEKE 171 (184)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCC
Confidence 9999999986643
No 57
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.62 E-value=7.9e-13 Score=111.02 Aligned_cols=201 Identities=10% Similarity=-0.037 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHhcCchhhHHHHHHHHHhc--------CCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHH
Q 021791 4 VKMYTSLIYGWCKINRIDMAERFLGEMIER--------GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75 (307)
Q Consensus 4 ~~~~~~li~~~~~~g~~~~a~~~~~~~~~~--------~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 75 (307)
+..||.+...+...|++++|++.|++..+. ..+....+|+.+..+|.. .|++++|...+++.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~----------~g~~~~A~~~~~ka 120 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH----------MGRLSDVQIYVDKV 120 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH----------TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH----------cCChHHHHHHHHHH
Confidence 467999999999999999999999987542 122245688889888988 45555555555544
Q ss_pred Hhc-----C--CCCCHHHHHHHHHHHHhc--CCchhHHHHHHHHHHcCCCCchhhHHHHHHH---HHhcCChHHHHHHHH
Q 021791 76 RVR-----G--IEPDVTSFSIVLHVYSRA--HKPQLSLDKLNFMKEKGICPTVATYTSVVKC---LCSCGRIEDAEELLG 143 (307)
Q Consensus 76 ~~~-----~--~~~~~~~~~~ll~~~~~~--~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~---~~~~~~~~~a~~~~~ 143 (307)
.+. + ......++.....++... +++++|++.|++..+.... +...+..+..+ +...++.++|++.++
T Consensus 121 ~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~-~~~~~~~~~~~~~~l~~~~~~~~al~~~~ 199 (472)
T 4g1t_A 121 KHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPK-NPEFTSGLAIASYRLDNWPPSQNAIDPLR 199 (472)
T ss_dssp HHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHSCCCCCTHHHHH
T ss_pred HHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 321 0 011233444443333332 3455666666665554322 23333333322 223344445555555
Q ss_pred HHHhCCCCCCHhhHHHHHHHHh----cCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhh
Q 021791 144 EMVRNGVSPSAETYNCFFKEYR----GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG 218 (307)
Q Consensus 144 ~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~ 218 (307)
+..+.+.. +..++..+...+. ..++.++|...+++..... +.+..++..+...+...|++++|...+++..+
T Consensus 200 ~al~l~p~-~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~--~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 275 (472)
T 4g1t_A 200 QAIRLNPD-NQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKA--PGVTDVLRSAAKFYRRKDEPDKAIELLKKALE 275 (472)
T ss_dssp HHHHHCSS-CHHHHHHHHHHHHHCC------CHHHHHHHHHHHHC--SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhhcCCc-chHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHcCchHHHHHHHHHHHH
Confidence 54443221 2333333222222 2234445555555444443 33444445555555555555555555544443
No 58
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.59 E-value=7.4e-12 Score=105.10 Aligned_cols=272 Identities=11% Similarity=-0.000 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHhcCchhhHHHHHHHHHhc-----C-CCC-cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHH
Q 021791 4 VKMYTSLIYGWCKINRIDMAERFLGEMIER-----G-VEP-NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR 76 (307)
Q Consensus 4 ~~~~~~li~~~~~~g~~~~a~~~~~~~~~~-----~-~~p-~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 76 (307)
..+|+.+...|...|++++|...+++..+. + ..+ ...++.....++...| .+++++|+..|++..
T Consensus 94 ~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~--------~~~y~~A~~~~~kal 165 (472)
T 4g1t_A 94 LVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCG--------GNQNERAKVCFEKAL 165 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHC--------TTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHc--------cccHHHHHHHHHHHH
Confidence 568999999999999999999999987642 1 111 3456666655666544 568999999999998
Q ss_pred hcCCCCCHHHHHHHHHH---HHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHh----cCChHHHHHHHHHHHhCC
Q 021791 77 VRGIEPDVTSFSIVLHV---YSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCS----CGRIEDAEELLGEMVRNG 149 (307)
Q Consensus 77 ~~~~~~~~~~~~~ll~~---~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~~~~a~~~~~~~~~~~ 149 (307)
+.. +-+...+..+..+ +...++.++|++.+++..+.... +..++..+...+.. .++.++|...+++.....
T Consensus 166 ~~~-p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~-~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~ 243 (472)
T 4g1t_A 166 EKK-PKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPD-NQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKA 243 (472)
T ss_dssp HHS-TTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSS-CHHHHHHHHHHHHHCC------CHHHHHHHHHHHHC
T ss_pred HhC-CCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCc-chHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhC
Confidence 874 2245555555544 34567888999999998877533 56666666655554 457789999999988765
Q ss_pred CCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhc-------------------CcHHHHH
Q 021791 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL-------------------NRMDMVR 210 (307)
Q Consensus 150 ~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------------------~~~~~a~ 210 (307)
.. +..++..+...|...|++++|...+.+..+.. +.+..++..+...|... +..+.|.
T Consensus 244 ~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~ 320 (472)
T 4g1t_A 244 PG-VTDVLRSAAKFYRRKDEPDKAIELLKKALEYI--PNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAV 320 (472)
T ss_dssp SS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHH
T ss_pred cc-HHHHHHHHHHHHHHcCchHHHHHHHHHHHHhC--CChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHH
Confidence 43 67888999999999999999999999998875 55677777776665432 3456788
Q ss_pred HHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHh--hHHHHHH-HHhhchhHHHHHHHHHHhh
Q 021791 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV--TFETLYR-GLIQSDMLRTWRRLKKKLD 287 (307)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~--~~~~l~~-~~~~~g~~~~a~~~~~~~~ 287 (307)
..++...... +.+..++..+...|...|++++|...|++.++....|... .+..+.. .....|+.++|...+++..
T Consensus 321 ~~~~~a~~~~-~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 321 AHLKKADEAN-DNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHC-TTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHhhcC-CchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 8888877654 2356678889999999999999999999999875443322 2233322 2456789999999988765
Q ss_pred hc
Q 021791 288 EE 289 (307)
Q Consensus 288 ~~ 289 (307)
+.
T Consensus 400 ~i 401 (472)
T 4g1t_A 400 KI 401 (472)
T ss_dssp HS
T ss_pred hc
Confidence 53
No 59
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.59 E-value=1.9e-14 Score=113.92 Aligned_cols=170 Identities=12% Similarity=0.108 Sum_probs=128.4
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhc-------CCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHH
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIER-------GVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEM 75 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~-------~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 75 (307)
+..++..+...+...|++++|..+|+++.+. ..+.....+..+...+.. .|++++|...+++.
T Consensus 26 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~----------~g~~~~A~~~~~~a 95 (311)
T 3nf1_A 26 RLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD----------QNKYKDAANLLNDA 95 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH----------CCCHHHHHHHHHHH
Confidence 4678899999999999999999999998873 223345678888888888 67788888888777
Q ss_pred Hhc------C-CCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHc------CC-CCchhhHHHHHHHHHhcCChHHHHHH
Q 021791 76 RVR------G-IEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK------GI-CPTVATYTSVVKCLCSCGRIEDAEEL 141 (307)
Q Consensus 76 ~~~------~-~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~------~~-~~~~~~~~~ll~~~~~~~~~~~a~~~ 141 (307)
.+. + .+....++..+...+...|++++|...+++..+. +. +....++..+...+...|++++|...
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 175 (311)
T 3nf1_A 96 LAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYY 175 (311)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHH
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 654 2 2234567888889999999999999999888764 21 22355677788888889999999988
Q ss_pred HHHHHhC------CCCC-CHhhHHHHHHHHhcCCChhHHHHHHHHHhh
Q 021791 142 LGEMVRN------GVSP-SAETYNCFFKEYRGRKDANGAMKLYRQMKE 182 (307)
Q Consensus 142 ~~~~~~~------~~~~-~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~ 182 (307)
+++.... +..| ...++..+...|...|++++|...+++...
T Consensus 176 ~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 223 (311)
T 3nf1_A 176 YQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILT 223 (311)
T ss_dssp HHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 8887764 1122 234677777788888888888888887765
No 60
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.58 E-value=1e-13 Score=109.64 Aligned_cols=206 Identities=12% Similarity=0.056 Sum_probs=147.0
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHc-------CCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhC------C
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK-------GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN------G 149 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~-------~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~------~ 149 (307)
+..++..+...+...|++++|..+++++.+. .......++..+...|...|++++|...+++.... +
T Consensus 26 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 105 (311)
T 3nf1_A 26 RLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGK 105 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 4566777888888888888888888877663 22334566777888888888888888888877653 1
Q ss_pred C-CCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhc------CCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhC---
Q 021791 150 V-SPSAETYNCFFKEYRGRKDANGAMKLYRQMKED------DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS--- 219 (307)
Q Consensus 150 ~-~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~--- 219 (307)
. .....++..+...|...|++++|...+++.... +..+....++..+...+...|++++|.+.++.+...
T Consensus 106 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 185 (311)
T 3nf1_A 106 DHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQT 185 (311)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 1 223456777778888888888888888877654 211234556777788888888888888888777653
Q ss_pred ---CCCC-CHHhHHHHHHHHHccCcHHHHHHHHHHHHHc-----------------------------------------
Q 021791 220 ---ELGL-DLDSYTMLIHGLCEKQKWKEACQYFVEMIEK----------------------------------------- 254 (307)
Q Consensus 220 ---~~~~-~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~----------------------------------------- 254 (307)
+..| ...++..+..+|...|++++|...++++.+.
T Consensus 186 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 265 (311)
T 3nf1_A 186 KLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGG 265 (311)
T ss_dssp TSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC-
T ss_pred HhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHH
Confidence 1122 2345777778888888888888888887752
Q ss_pred -------CCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhh
Q 021791 255 -------GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288 (307)
Q Consensus 255 -------~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~ 288 (307)
....+..++..+..+|...|++++|.+++++..+
T Consensus 266 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 306 (311)
T 3nf1_A 266 WYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMR 306 (311)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 1122345688889999999999999999998754
No 61
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.58 E-value=7.3e-14 Score=117.23 Aligned_cols=214 Identities=9% Similarity=-0.028 Sum_probs=180.4
Q ss_pred hhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHH-HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC
Q 021791 20 IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTI-RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH 98 (307)
Q Consensus 20 ~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~ 98 (307)
++++.+.+++.... .+.+...+..+-.++.. .+++ ++|++.|++..+.. +.+...|..+..+|...|
T Consensus 84 ~~~al~~l~~~~~~-~~~~a~~~~~lg~~~~~----------~g~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g 151 (474)
T 4abn_A 84 MEKTLQQMEEVLGS-AQVEAQALMLKGKALNV----------TPDYSPEAEVLLSKAVKLE-PELVEAWNQLGEVYWKKG 151 (474)
T ss_dssp HHHHHHHHHHHHTT-CCCCHHHHHHHHHHHTS----------SSSCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcc-CchhHHHHHHHHHHHHh----------ccccHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHcC
Confidence 45566666655443 23367788888888888 7788 99999999998874 346889999999999999
Q ss_pred CchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhc---------CChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcC--
Q 021791 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC---------GRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR-- 167 (307)
Q Consensus 99 ~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~---------~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 167 (307)
++++|.+.|++..+.. |+...+..+...|... |++++|...+++..+.... +...|..+..+|...
T Consensus 152 ~~~~A~~~~~~al~~~--p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~ 228 (474)
T 4abn_A 152 DVTSAHTCFSGALTHC--KNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYF 228 (474)
T ss_dssp CHHHHHHHHHHHHTTC--CCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHH
Confidence 9999999999999874 6678899999999999 9999999999999987544 688899999999888
Q ss_pred ------CChhHHHHHHHHHhhcCCCC---ccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHcc
Q 021791 168 ------KDANGAMKLYRQMKEDDLCV---PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238 (307)
Q Consensus 168 ------~~~~~a~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~ 238 (307)
|++++|...|++..+.. + .+...|..+..+|...|++++|.+.|++....... +...+..+..++...
T Consensus 229 ~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~a~~~l~~~~~~l 305 (474)
T 4abn_A 229 NTGQNPKISQQALSAYAQAEKVD--RKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPA-WPEPQQREQQLLEFL 305 (474)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHC--GGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHH
T ss_pred hhccccchHHHHHHHHHHHHHhC--CCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHH
Confidence 99999999999999874 4 58899999999999999999999999999887433 677888899999999
Q ss_pred CcHHHHHHHHHHH
Q 021791 239 QKWKEACQYFVEM 251 (307)
Q Consensus 239 g~~~~a~~~~~~~ 251 (307)
|++++|+..+.++
T Consensus 306 g~~~eAi~~~~~~ 318 (474)
T 4abn_A 306 SRLTSLLESKGKT 318 (474)
T ss_dssp HHHHHHHHHTTTC
T ss_pred HHHHHHHHHhccc
Confidence 9999998866543
No 62
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.57 E-value=1.8e-11 Score=104.37 Aligned_cols=217 Identities=10% Similarity=0.052 Sum_probs=151.5
Q ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHHHHHh-------cCCch-------hHHHHHHHHHHcCCCCchhhHHHHHHHHHhc
Q 021791 67 NAEKVFDEMRVRGIEPDVTSFSIVLHVYSR-------AHKPQ-------LSLDKLNFMKEKGICPTVATYTSVVKCLCSC 132 (307)
Q Consensus 67 ~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~-------~~~~~-------~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~ 132 (307)
++..+|++.... .+-+...|..++..+.+ .|+++ +|..+|++..+.-.+.+...|..++..+.+.
T Consensus 256 ~a~~~y~~al~~-~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~ 334 (530)
T 2ooe_A 256 RVMFAYEQCLLV-LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 334 (530)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh-CCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 444556666554 23356677777777665 68876 7888888887632233577788888888888
Q ss_pred CChHHHHHHHHHHHhCCCCCC-HhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHH-HHhcCcHHHHH
Q 021791 133 GRIEDAEELLGEMVRNGVSPS-AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM-FMALNRMDMVR 210 (307)
Q Consensus 133 ~~~~~a~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~a~ 210 (307)
|++++|..+|+++.+.... + ...|..++..+.+.|+.++|..+|++..+.. +.+...+...... +...|+.++|.
T Consensus 335 g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~--~~~~~~~~~~a~~~~~~~~~~~~A~ 411 (530)
T 2ooe_A 335 MKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDA--RTRHHVYVTAALMEYYCSKDKSVAF 411 (530)
T ss_dssp TCHHHHHHHHHHHHHSSSS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT--TCCTHHHHHHHHHHHHHTCCHHHHH
T ss_pred CCHHHHHHHHHHHhCcccc-CchHHHHHHHHHHHHhcCHHHHHHHHHHHHhcc--CCchHHHHHHHHHHHHHcCChhHHH
Confidence 8888888888888875322 2 2478888888888888888888888888764 2333333332222 33578888888
Q ss_pred HHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcC-CCCc--HhhHHHHHHHHhhchhHHHHHHHHHHhh
Q 021791 211 EIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG-LLPQ--KVTFETLYRGLIQSDMLRTWRRLKKKLD 287 (307)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~-~~p~--~~~~~~l~~~~~~~g~~~~a~~~~~~~~ 287 (307)
++|+...+.. +-+...|..++..+.+.|+.++|..+|++.+..+ ..|+ ...|...+......|+.+.+..+.+++.
T Consensus 412 ~~~e~al~~~-p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e~~~G~~~~~~~~~~r~~ 490 (530)
T 2ooe_A 412 KIFELGLKKY-GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRF 490 (530)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHC-CCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 8888877653 2267788888888888888888888888888763 2232 2367677777777888888888887765
Q ss_pred h
Q 021791 288 E 288 (307)
Q Consensus 288 ~ 288 (307)
+
T Consensus 491 ~ 491 (530)
T 2ooe_A 491 T 491 (530)
T ss_dssp H
T ss_pred H
Confidence 4
No 63
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.56 E-value=1.9e-11 Score=104.25 Aligned_cols=269 Identities=12% Similarity=0.131 Sum_probs=174.2
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCC
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 82 (307)
|+..|..++. +.+.|++++|..+|+++.+. .+-+...|..++..+.+ .+++++|..+|+++... .|
T Consensus 12 ~~~~w~~l~~-~~~~~~~~~a~~~~e~al~~-~P~~~~~w~~~~~~~~~----------~~~~~~a~~~~~ral~~--~p 77 (530)
T 2ooe_A 12 DLDAWSILIR-EAQNQPIDKARKTYERLVAQ-FPSSGRFWKLYIEAEIK----------AKNYDKVEKLFQRCLMK--VL 77 (530)
T ss_dssp CHHHHHHHHH-HHHSSCHHHHHHHHHHHHTT-CTTCHHHHHHHHHHHHH----------TTCHHHHHHHHHHHTTT--CC
T ss_pred CHHHHHHHHH-HHHhCCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHh----------cCCHHHHHHHHHHHHhc--CC
Confidence 6778888888 47789999999999999876 34466788888888888 77888999999998876 46
Q ss_pred CHHHHHHHHHHH-HhcCCchhHHH----HHHHHHHc-CCCC-chhhHHHHHHHHHh---------cCChHHHHHHHHHHH
Q 021791 83 DVTSFSIVLHVY-SRAHKPQLSLD----KLNFMKEK-GICP-TVATYTSVVKCLCS---------CGRIEDAEELLGEMV 146 (307)
Q Consensus 83 ~~~~~~~ll~~~-~~~~~~~~a~~----~~~~~~~~-~~~~-~~~~~~~ll~~~~~---------~~~~~~a~~~~~~~~ 146 (307)
+...|..++... ...|+.+.|.+ +|+..... |..| +...|...+....+ .|+++.|..+|++..
T Consensus 78 ~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~g~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~a~~~y~~al 157 (530)
T 2ooe_A 78 HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGC 157 (530)
T ss_dssp CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHSCCCSSTTHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHhcCCCcccHHHHhHHHHHHHHHHHHH
Confidence 777777776533 34566666654 55555433 4333 44556666655443 567777777777766
Q ss_pred hCCCCCCHhhHHHH-----------------------------------------------------------------H
Q 021791 147 RNGVSPSAETYNCF-----------------------------------------------------------------F 161 (307)
Q Consensus 147 ~~~~~~~~~~~~~l-----------------------------------------------------------------~ 161 (307)
.....+....|... +
T Consensus 158 ~~P~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~A~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~w~~~~ 237 (530)
T 2ooe_A 158 VNPMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYI 237 (530)
T ss_dssp TSCCTTHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCSSSCCCCCC--CCHHHHHHHHHHHH
T ss_pred hchhhhHHHHHHHHHHHHHhhchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHH
Confidence 52111111222111 1
Q ss_pred HHHhc----CCCh----hHHHHHHHHHhhcCCCCccHHHHHHHHHHHHh-------cCcHH-------HHHHHHHHHhhC
Q 021791 162 KEYRG----RKDA----NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA-------LNRMD-------MVREIWNHVKGS 219 (307)
Q Consensus 162 ~~~~~----~~~~----~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~-------~a~~~~~~~~~~ 219 (307)
..... .++. .++..+|++..... +.+...|..++..+.+ .|+++ +|..++++....
T Consensus 238 ~~e~~~~~~~~~~~~~~~~a~~~y~~al~~~--p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~ 315 (530)
T 2ooe_A 238 QWEKSNPLRTEDQTLITKRVMFAYEQCLLVL--GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAIST 315 (530)
T ss_dssp HHHHHCSSCCSCSHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHcCCccCCcchhHHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHH
Confidence 10000 0111 13444555555443 4456666666666664 67776 788888888752
Q ss_pred CCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcH--hhHHHHHHHHhhchhHHHHHHHHHHhhhc
Q 021791 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK--VTFETLYRGLIQSDMLRTWRRLKKKLDEE 289 (307)
Q Consensus 220 ~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~--~~~~~l~~~~~~~g~~~~a~~~~~~~~~~ 289 (307)
-.+-+...|..++..+.+.|++++|..+|+++++. .|+. ..|..++..+.+.|+.++|+.++++..+.
T Consensus 316 ~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~ 385 (530)
T 2ooe_A 316 LLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI--EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED 385 (530)
T ss_dssp TCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS--SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCc--cccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 12335777888888888888888888888888874 4432 46777777777888888888888887654
No 64
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.55 E-value=1.2e-11 Score=100.71 Aligned_cols=272 Identities=10% Similarity=-0.041 Sum_probs=191.8
Q ss_pred HHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHH----HHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCC-C
Q 021791 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVV----TYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGI-E 81 (307)
Q Consensus 7 ~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~----~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~ 81 (307)
.......+...|++++|...+++........+.. .++.+...+.. .|++++|...+++...... .
T Consensus 17 ~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~----------~g~~~~A~~~~~~al~~~~~~ 86 (373)
T 1hz4_A 17 NALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHC----------KGELTRSLALMQQTEQMARQH 86 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHh----------cCcHHHHHHHHHHHHHHHHhc
Confidence 3445556778999999999999988763222222 44555566666 7788888888888765310 1
Q ss_pred CC----HHHHHHHHHHHHhcCCchhHHHHHHHHHHc----CCC--C-chhhHHHHHHHHHhcCChHHHHHHHHHHHhCCC
Q 021791 82 PD----VTSFSIVLHVYSRAHKPQLSLDKLNFMKEK----GIC--P-TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150 (307)
Q Consensus 82 ~~----~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~----~~~--~-~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~ 150 (307)
++ ..++..+...+...|++++|...+++..+. +.. | ....+..+...+...|++++|...+++......
T Consensus 87 ~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 166 (373)
T 1hz4_A 87 DVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLS 166 (373)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Confidence 12 234667788899999999999999887653 221 2 244567788889999999999999999876432
Q ss_pred CC----CHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCcc-HHHHH----HHHHHHHhcCcHHHHHHHHHHHhhCCC
Q 021791 151 SP----SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN-IHTYN----ILIGMFMALNRMDMVREIWNHVKGSEL 221 (307)
Q Consensus 151 ~~----~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~----~l~~~~~~~~~~~~a~~~~~~~~~~~~ 221 (307)
.. ...++..+...+...|++++|...+++.........+ ..... ..+..+...|++++|...++.......
T Consensus 167 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~~ 246 (373)
T 1hz4_A 167 SYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEF 246 (373)
T ss_dssp TSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCC
T ss_pred ccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCCC
Confidence 21 2346777888899999999999999988754210111 11111 233457789999999999999876532
Q ss_pred CCC---HHhHHHHHHHHHccCcHHHHHHHHHHHHHc----CCCCcH-hhHHHHHHHHhhchhHHHHHHHHHHhhh
Q 021791 222 GLD---LDSYTMLIHGLCEKQKWKEACQYFVEMIEK----GLLPQK-VTFETLYRGLIQSDMLRTWRRLKKKLDE 288 (307)
Q Consensus 222 ~~~---~~~~~~li~~~~~~g~~~~a~~~~~~~~~~----~~~p~~-~~~~~l~~~~~~~g~~~~a~~~~~~~~~ 288 (307)
.++ ...+..+...+...|++++|...+++.... |..++. .++..+..++...|+.++|...+++...
T Consensus 247 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~al~ 321 (373)
T 1hz4_A 247 ANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALK 321 (373)
T ss_dssp TTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 211 234667788899999999999999988654 222233 2566677888999999999999887644
No 65
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.54 E-value=1.5e-12 Score=106.31 Aligned_cols=226 Identities=10% Similarity=0.022 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHHHHHhc----CCCC-CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcC--C----CCchhhHHHHHHHHH
Q 021791 62 EKTIRNAEKVFDEMRVR----GIEP-DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG--I----CPTVATYTSVVKCLC 130 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~----~~~~-~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~--~----~~~~~~~~~ll~~~~ 130 (307)
.|++++|...|++..+. +-.+ ...++..+...+...|+++.|...+.+..+.. . .....+++.+...|.
T Consensus 116 ~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~ 195 (383)
T 3ulq_A 116 QREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFL 195 (383)
T ss_dssp TTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHH
Confidence 78899999999998764 1111 34678899999999999999999998886541 1 112457888999999
Q ss_pred hcCChHHHHHHHHHHHhCCCC-CC----HhhHHHHHHHHhcCCChhHHHHHHHHHhh-----cCCCCccHHHHHHHHHHH
Q 021791 131 SCGRIEDAEELLGEMVRNGVS-PS----AETYNCFFKEYRGRKDANGAMKLYRQMKE-----DDLCVPNIHTYNILIGMF 200 (307)
Q Consensus 131 ~~~~~~~a~~~~~~~~~~~~~-~~----~~~~~~l~~~~~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~~l~~~~ 200 (307)
..|++++|...+++..+.... ++ ..++..+...|...|++++|...+++... ... +....++..+...+
T Consensus 196 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~-~~~~~~~~~l~~~~ 274 (383)
T 3ulq_A 196 DLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNIL-PSLPQAYFLITQIH 274 (383)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCG-GGHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccc-hhHHHHHHHHHHHH
Confidence 999999999999988753111 11 24788899999999999999999999877 321 33467789999999
Q ss_pred HhcCcHHHHHHHHHHHhhC----CCCCCHHhHHHHHHHHHccCc---HHHHHHHHHHHHHcCCCCc-HhhHHHHHHHHhh
Q 021791 201 MALNRMDMVREIWNHVKGS----ELGLDLDSYTMLIHGLCEKQK---WKEACQYFVEMIEKGLLPQ-KVTFETLYRGLIQ 272 (307)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~~li~~~~~~g~---~~~a~~~~~~~~~~~~~p~-~~~~~~l~~~~~~ 272 (307)
...|++++|...+++.... +.+.....+..+...+...|+ +++|+.++++. +..|+ ...+..+...|..
T Consensus 275 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~---~~~~~~~~~~~~la~~y~~ 351 (383)
T 3ulq_A 275 YKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLESK---MLYADLEDFAIDVAKYYHE 351 (383)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC---cCHHHHHHHHHHHHHHHHH
Confidence 9999999999999887653 111122335677788888998 77777777765 33333 3467778899999
Q ss_pred chhHHHHHHHHHHhhhcCC
Q 021791 273 SDMLRTWRRLKKKLDEESI 291 (307)
Q Consensus 273 ~g~~~~a~~~~~~~~~~~~ 291 (307)
.|++++|...+++..+..-
T Consensus 352 ~g~~~~A~~~~~~al~~~~ 370 (383)
T 3ulq_A 352 RKNFQKASAYFLKVEQVRQ 370 (383)
T ss_dssp TTCHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 9999999999998865443
No 66
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.53 E-value=1.9e-12 Score=94.19 Aligned_cols=163 Identities=13% Similarity=0.047 Sum_probs=84.2
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHh
Q 021791 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR 165 (307)
Q Consensus 86 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (307)
.+..+...+...|++++|.+.++.+.+... .+..++..+...+...|++++|...++++.+... .+...+..+...+.
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~a~~~~ 87 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYDADA-FDVDVALHLGIAYVKTGAVDRGTELLERSLADAP-DNVKVATVLGLTYV 87 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCCTTS-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCc-cChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHH
Confidence 344455555555666666665555544322 2444555555555555555555555555554422 24445555555555
Q ss_pred cCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHH
Q 021791 166 GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245 (307)
Q Consensus 166 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~ 245 (307)
..|++++|...+++..... +.+...+..+...+...|++++|...++.+.... +.+...+..+...+...|++++|.
T Consensus 88 ~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~ 164 (186)
T 3as5_A 88 QVQKYDLAVPLLIKVAEAN--PINFNVRFRLGVALDNLGRFDEAIDSFKIALGLR-PNEGKVHRAIAFSYEQMGRHEEAL 164 (186)
T ss_dssp HHTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HhcCHHHHHHHHHHHHhcC--cHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcC-ccchHHHHHHHHHHHHcCCHHHHH
Confidence 5555555555555555443 3344455555555555555555555555554432 123444555555555555555555
Q ss_pred HHHHHHHH
Q 021791 246 QYFVEMIE 253 (307)
Q Consensus 246 ~~~~~~~~ 253 (307)
..+++..+
T Consensus 165 ~~~~~~~~ 172 (186)
T 3as5_A 165 PHFKKANE 172 (186)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555443
No 67
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.52 E-value=2.2e-12 Score=93.75 Aligned_cols=167 Identities=13% Similarity=0.069 Sum_probs=146.1
Q ss_pred hhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHH
Q 021791 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198 (307)
Q Consensus 119 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (307)
...+..+...+...|++++|...++++..... .+...+..+...+...|++++|...+++..... +.+...+..+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~a~ 84 (186)
T 3as5_A 8 QVYYRDKGISHAKAGRYSQAVMLLEQVYDADA-FDVDVALHLGIAYVKTGAVDRGTELLERSLADA--PDNVKVATVLGL 84 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTS-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc-cChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--CCCHHHHHHHHH
Confidence 45677788899999999999999999887643 367888999999999999999999999998875 567888999999
Q ss_pred HHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHH
Q 021791 199 MFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRT 278 (307)
Q Consensus 199 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~ 278 (307)
.+...|++++|.+.++.+.... +.+...+..+...+...|++++|...++++.+.. +.+...+..+...+...|++++
T Consensus 85 ~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~ 162 (186)
T 3as5_A 85 TYVQVQKYDLAVPLLIKVAEAN-PINFNVRFRLGVALDNLGRFDEAIDSFKIALGLR-PNEGKVHRAIAFSYEQMGRHEE 162 (186)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHhcCHHHHHHHHHHHHhcC-cHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcC-ccchHHHHHHHHHHHHcCCHHH
Confidence 9999999999999999988764 3477889999999999999999999999998874 4467788999999999999999
Q ss_pred HHHHHHHhhhcC
Q 021791 279 WRRLKKKLDEES 290 (307)
Q Consensus 279 a~~~~~~~~~~~ 290 (307)
|...+++..+..
T Consensus 163 A~~~~~~~~~~~ 174 (186)
T 3as5_A 163 ALPHFKKANELD 174 (186)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC
Confidence 999999986654
No 68
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.51 E-value=1.6e-12 Score=113.75 Aligned_cols=166 Identities=13% Similarity=0.111 Sum_probs=149.8
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHH
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~ 162 (307)
+...++.|...+.+.|++++|++.|++..+.... +..++..+..+|.+.|++++|+..|++..+.... +...|..+..
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~ 85 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGN 85 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHH
Confidence 5678999999999999999999999999988543 6889999999999999999999999999987544 6889999999
Q ss_pred HHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHH
Q 021791 163 EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242 (307)
Q Consensus 163 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~ 242 (307)
++...|++++|...|++..+.. +.+...+..+..++...|++++|++.+++..+.... +...+..+..++...|+++
T Consensus 86 ~l~~~g~~~~A~~~~~kAl~l~--P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~-~~~a~~~L~~~l~~~g~~~ 162 (723)
T 4gyw_A 86 TLKEMQDVQGALQCYTRAIQIN--PAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPD-FPDAYCNLAHCLQIVCDWT 162 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCCT
T ss_pred HHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHhhhhhHHHhcccHH
Confidence 9999999999999999999876 667889999999999999999999999999987533 6788999999999999999
Q ss_pred HHHHHHHHHHH
Q 021791 243 EACQYFVEMIE 253 (307)
Q Consensus 243 ~a~~~~~~~~~ 253 (307)
+|.+.++++++
T Consensus 163 ~A~~~~~kal~ 173 (723)
T 4gyw_A 163 DYDERMKKLVS 173 (723)
T ss_dssp THHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988765
No 69
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.51 E-value=3.3e-13 Score=110.82 Aligned_cols=263 Identities=11% Similarity=-0.014 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHHhcCchhhHHHHHHHHHhc----CCCC-cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhc
Q 021791 4 VKMYTSLIYGWCKINRIDMAERFLGEMIER----GVEP-NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78 (307)
Q Consensus 4 ~~~~~~li~~~~~~g~~~~a~~~~~~~~~~----~~~p-~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 78 (307)
..+|..+...+...|++++|...|++.... +..| ...++..+...+.. .|++++|...+++..+.
T Consensus 47 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----------~g~~~~A~~~~~~al~~ 116 (406)
T 3sf4_A 47 SAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKV----------LGNFDEAIVCCQRHLDI 116 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHH
Confidence 357888999999999999999999987543 2222 24567777778887 67788888888777653
Q ss_pred C----C-CCCHHHHHHHHHHHHhcCC--------------------chhHHHHHHHHHHc----CC-CCchhhHHHHHHH
Q 021791 79 G----I-EPDVTSFSIVLHVYSRAHK--------------------PQLSLDKLNFMKEK----GI-CPTVATYTSVVKC 128 (307)
Q Consensus 79 ~----~-~~~~~~~~~ll~~~~~~~~--------------------~~~a~~~~~~~~~~----~~-~~~~~~~~~ll~~ 128 (307)
. - .....++..+...+...|+ +++|.+.++...+. +. .....++..+...
T Consensus 117 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~ 196 (406)
T 3sf4_A 117 SRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNT 196 (406)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Confidence 1 1 1124478888999999999 99999998876543 11 1124568888999
Q ss_pred HHhcCChHHHHHHHHHHHhCCCC-CC----HhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCc----cHHHHHHHHHH
Q 021791 129 LCSCGRIEDAEELLGEMVRNGVS-PS----AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP----NIHTYNILIGM 199 (307)
Q Consensus 129 ~~~~~~~~~a~~~~~~~~~~~~~-~~----~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~~~~~~l~~~ 199 (307)
|...|++++|...+++....... ++ ..++..+...+...|++++|...+++........+ ...++..+...
T Consensus 197 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~ 276 (406)
T 3sf4_A 197 HYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNT 276 (406)
T ss_dssp HHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHH
Confidence 99999999999999988753111 12 23788888999999999999999998865421011 15678889999
Q ss_pred HHhcCcHHHHHHHHHHHhhCCCC-CC----HHhHHHHHHHHHccCcHHHHHHHHHHHHHc----CCCC-cHhhHHHHHHH
Q 021791 200 FMALNRMDMVREIWNHVKGSELG-LD----LDSYTMLIHGLCEKQKWKEACQYFVEMIEK----GLLP-QKVTFETLYRG 269 (307)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~-~~----~~~~~~li~~~~~~g~~~~a~~~~~~~~~~----~~~p-~~~~~~~l~~~ 269 (307)
+...|++++|...++........ .+ ..++..+...|...|++++|...+++..+. +..+ ...++..+...
T Consensus 277 ~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~ 356 (406)
T 3sf4_A 277 YTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGELTARLNLSDL 356 (406)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHH
Confidence 99999999999999887653111 12 457888889999999999999999988654 2111 23456667777
Q ss_pred HhhchhH
Q 021791 270 LIQSDML 276 (307)
Q Consensus 270 ~~~~g~~ 276 (307)
+...|+.
T Consensus 357 ~~~~g~~ 363 (406)
T 3sf4_A 357 QMVLGLS 363 (406)
T ss_dssp HHHHHTT
T ss_pred HHHhhHh
Confidence 7777754
No 70
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.51 E-value=9.6e-12 Score=101.59 Aligned_cols=263 Identities=9% Similarity=-0.020 Sum_probs=183.8
Q ss_pred HHhcCchhhHHHHHHHHHhc--CCCC--cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHH-----------HHHHHHHhc
Q 021791 14 WCKINRIDMAERFLGEMIER--GVEP--NVVTYNVLLNGVCRRASLHPNERFEKTIRNAE-----------KVFDEMRVR 78 (307)
Q Consensus 14 ~~~~g~~~~a~~~~~~~~~~--~~~p--~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~-----------~~~~~~~~~ 78 (307)
+.+.+++++|..+++++.+. ..+. +...|-.++..-...- .+.++.+. +.++.+...
T Consensus 22 ~i~~~~~~~A~~l~~~i~~~~~~~~~~~~~~~y~~ll~~r~~~~--------~~~~~~~~~~~~e~~~~~~~~~~~i~~~ 93 (383)
T 3ulq_A 22 YIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLM--------LEYLEPLEKMRIEEQPRLSDLLLEIDKK 93 (383)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH--------HHHHGGGGGSCGGGSCCHHHHHHHHHHH
T ss_pred HHHHcCHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHH--------HhhcCcccccccccccchhhHHHHHHhc
Confidence 45689999999999998765 3323 3344444443222100 34444444 666665443
Q ss_pred CCCCCHHH------HHHHHHHHHhcCCchhHHHHHHHHHHc----CCCC-chhhHHHHHHHHHhcCChHHHHHHHHHHHh
Q 021791 79 GIEPDVTS------FSIVLHVYSRAHKPQLSLDKLNFMKEK----GICP-TVATYTSVVKCLCSCGRIEDAEELLGEMVR 147 (307)
Q Consensus 79 ~~~~~~~~------~~~ll~~~~~~~~~~~a~~~~~~~~~~----~~~~-~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~ 147 (307)
+++... +......+...|++++|...+++..+. +-.+ ...++..+...|...|++++|...+++..+
T Consensus 94 --~~~~~~~l~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~ 171 (383)
T 3ulq_A 94 --QARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYE 171 (383)
T ss_dssp --THHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred --CCCchhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 112222 223566778899999999999998764 2111 346788999999999999999999998875
Q ss_pred CCCC-C-----CHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCC----CccHHHHHHHHHHHHhcCcHHHHHHHHHHHh
Q 021791 148 NGVS-P-----SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC----VPNIHTYNILIGMFMALNRMDMVREIWNHVK 217 (307)
Q Consensus 148 ~~~~-~-----~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~ 217 (307)
.... + ...+++.+...|...|++++|...+.+..+.... .....++..+...|...|++++|.+.+++..
T Consensus 172 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al 251 (383)
T 3ulq_A 172 IYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAI 251 (383)
T ss_dssp HHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3111 1 2357888889999999999999999988754210 1123478889999999999999999999887
Q ss_pred hC----CC-CCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHc----CCCCcHhhHHHHHHHHhhchh---HHHHHHHHHH
Q 021791 218 GS----EL-GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK----GLLPQKVTFETLYRGLIQSDM---LRTWRRLKKK 285 (307)
Q Consensus 218 ~~----~~-~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~----~~~p~~~~~~~l~~~~~~~g~---~~~a~~~~~~ 285 (307)
.. +. +....++..+..+|...|++++|...+++..+. +-+.....+..+...+...|+ .++|..++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~ 331 (383)
T 3ulq_A 252 AVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLES 331 (383)
T ss_dssp HHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHH
T ss_pred HHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 62 22 224567889999999999999999999998764 111122335667778888888 7777777766
Q ss_pred h
Q 021791 286 L 286 (307)
Q Consensus 286 ~ 286 (307)
.
T Consensus 332 ~ 332 (383)
T 3ulq_A 332 K 332 (383)
T ss_dssp T
T ss_pred C
Confidence 5
No 71
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.50 E-value=7.2e-13 Score=103.16 Aligned_cols=226 Identities=14% Similarity=0.052 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHc------CC-CCchhhHHHHHHHHHhcCC
Q 021791 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK------GI-CPTVATYTSVVKCLCSCGR 134 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~------~~-~~~~~~~~~ll~~~~~~~~ 134 (307)
...+++|++++++......+....++..+...+...|++++|...+++..+. +- +....++..+...|...|+
T Consensus 21 ~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 100 (283)
T 3edt_B 21 VPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGK 100 (283)
T ss_dssp HHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhcc
Confidence 4556777777777765433445678899999999999999999999988765 22 2246678899999999999
Q ss_pred hHHHHHHHHHHHhC------C-CCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhc------CCCCccHHHHHHHHHHHH
Q 021791 135 IEDAEELLGEMVRN------G-VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED------DLCVPNIHTYNILIGMFM 201 (307)
Q Consensus 135 ~~~a~~~~~~~~~~------~-~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~------~~~~~~~~~~~~l~~~~~ 201 (307)
+++|...+++.... . .+....++..+...|...|++++|...+++.... ...+....++..+...+.
T Consensus 101 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 180 (283)
T 3edt_B 101 YKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYL 180 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 99999999988764 1 1224567888999999999999999999998775 111334678889999999
Q ss_pred hcCcHHHHHHHHHHHhhC-------CCCCC-HHhHHHHHHHHHccCc------HHHHHHHHHHHHHcCCCCcHhhHHHHH
Q 021791 202 ALNRMDMVREIWNHVKGS-------ELGLD-LDSYTMLIHGLCEKQK------WKEACQYFVEMIEKGLLPQKVTFETLY 267 (307)
Q Consensus 202 ~~~~~~~a~~~~~~~~~~-------~~~~~-~~~~~~li~~~~~~g~------~~~a~~~~~~~~~~~~~p~~~~~~~l~ 267 (307)
..|++++|...++.+... ...+. ...|..+...+...+. +..+...++.... .......++..+.
T Consensus 181 ~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~la 259 (283)
T 3edt_B 181 KQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKV-DSPTVNTTLRSLG 259 (283)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCC-CCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHH
Confidence 999999999999988753 11222 2233333333333222 2233222222211 1122345688888
Q ss_pred HHHhhchhHHHHHHHHHHhhh
Q 021791 268 RGLIQSDMLRTWRRLKKKLDE 288 (307)
Q Consensus 268 ~~~~~~g~~~~a~~~~~~~~~ 288 (307)
..|...|++++|..++++..+
T Consensus 260 ~~~~~~g~~~~A~~~~~~al~ 280 (283)
T 3edt_B 260 ALYRRQGKLEAAHTLEDCASR 280 (283)
T ss_dssp HHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999998754
No 72
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.48 E-value=3.5e-11 Score=90.80 Aligned_cols=195 Identities=10% Similarity=0.004 Sum_probs=133.4
Q ss_pred CCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHH
Q 021791 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161 (307)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 161 (307)
.|+..+......+...|++++|...|+...+....++...+..+..++...|++++|...+++....... +...+..+.
T Consensus 5 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~ 83 (228)
T 4i17_A 5 TDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKS 83 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHH
Confidence 3567777788888888888888888888887764356777777888888888888888888888876443 566778888
Q ss_pred HHHhcCCChhHHHHHHHHHhhcCCCCccH-------HHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCC---HHhHHHH
Q 021791 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNI-------HTYNILIGMFMALNRMDMVREIWNHVKGSELGLD---LDSYTML 231 (307)
Q Consensus 162 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-------~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~l 231 (307)
..+...|++++|...+++..+.. +.+. ..|..+...+...|++++|.+.++...+. .|+ ...+..+
T Consensus 84 ~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~~l 159 (228)
T 4i17_A 84 AAYRDMKNNQEYIATLTEGIKAV--PGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV--TSKKWKTDALYSL 159 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--SCHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHC--CCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc--CCCcccHHHHHHH
Confidence 88888888888888888888764 3444 45777777788888888888888888775 344 4556666
Q ss_pred HHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhhc
Q 021791 232 IHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289 (307)
Q Consensus 232 i~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~ 289 (307)
..+|...|+ ..++++...+ ..+...+.... ....+.+++|...+++..+.
T Consensus 160 ~~~~~~~~~-----~~~~~a~~~~-~~~~~~~~~~~--~~~~~~~~~A~~~~~~a~~l 209 (228)
T 4i17_A 160 GVLFYNNGA-----DVLRKATPLA-SSNKEKYASEK--AKADAAFKKAVDYLGEAVTL 209 (228)
T ss_dssp HHHHHHHHH-----HHHHHHGGGT-TTCHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-----HHHHHHHhcc-cCCHHHHHHHH--HHHHHHHHHHHHHHHHHhhc
Confidence 666655443 3334433332 12222332222 23345566666666665544
No 73
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.47 E-value=5.1e-13 Score=110.10 Aligned_cols=240 Identities=10% Similarity=-0.016 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHhcCchhhHHHHHHHHHhc----CC-CCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhc-
Q 021791 5 KMYTSLIYGWCKINRIDMAERFLGEMIER----GV-EPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR- 78 (307)
Q Consensus 5 ~~~~~li~~~~~~g~~~~a~~~~~~~~~~----~~-~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~- 78 (307)
..|..+...|...|++++|.+.|++..+. +. ......+..+...+.. .|++++|...+++..+.
T Consensus 87 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----------~g~~~~A~~~~~~al~~~ 156 (411)
T 4a1s_A 87 AIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKV----------MGRFDEAAICCERHLTLA 156 (411)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHH----------CCCHHHHHHHHHHHHHHH
Confidence 57888999999999999999999988654 11 2234567777778888 67778888888776553
Q ss_pred ---C-CCCCHHHHHHHHHHHHhcCC-----------------chhHHHHHHHHHHc----CC-CCchhhHHHHHHHHHhc
Q 021791 79 ---G-IEPDVTSFSIVLHVYSRAHK-----------------PQLSLDKLNFMKEK----GI-CPTVATYTSVVKCLCSC 132 (307)
Q Consensus 79 ---~-~~~~~~~~~~ll~~~~~~~~-----------------~~~a~~~~~~~~~~----~~-~~~~~~~~~ll~~~~~~ 132 (307)
+ .+....++..+...+...|+ +++|.+.+++..+. +. .....++..+...|...
T Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 236 (411)
T 4a1s_A 157 RQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLL 236 (411)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 1 12234578888999999999 99999998876543 11 11345788889999999
Q ss_pred CChHHHHHHHHHHHhCCCC-CC----HhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCC----CccHHHHHHHHHHHHhc
Q 021791 133 GRIEDAEELLGEMVRNGVS-PS----AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC----VPNIHTYNILIGMFMAL 203 (307)
Q Consensus 133 ~~~~~a~~~~~~~~~~~~~-~~----~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~ 203 (307)
|++++|...+++....... ++ ..++..+...|...|++++|...+++....... .....++..+...+...
T Consensus 237 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 316 (411)
T 4a1s_A 237 GDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLL 316 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 9999999999988754211 11 237788899999999999999999987664210 11256788899999999
Q ss_pred CcHHHHHHHHHHHhhCCC-----CCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 204 NRMDMVREIWNHVKGSEL-----GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~-----~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
|++++|...+++...... .....++..+...|...|++++|...+++..+.
T Consensus 317 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 372 (411)
T 4a1s_A 317 HEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQHLQL 372 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 999999999998765310 012347788889999999999999999998765
No 74
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.47 E-value=3.9e-12 Score=111.23 Aligned_cols=166 Identities=11% Similarity=0.019 Sum_probs=147.6
Q ss_pred chhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHH
Q 021791 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197 (307)
Q Consensus 118 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~ 197 (307)
+..+++.+...|.+.|++++|+..|++..+.... +..++..+..+|.+.|++++|...|++..+.. +.+...|..+.
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~--P~~~~a~~nLg 84 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNLASVLQQQGKLQEALMHYKEAIRIS--PTFADAYSNMG 84 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHH
Confidence 4678999999999999999999999999987544 68899999999999999999999999999886 66788999999
Q ss_pred HHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHH
Q 021791 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLR 277 (307)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~ 277 (307)
.++...|++++|++.+++..+.... +...|..+..+|...|++++|+..|++.++.. +-+...+..+..++...|+++
T Consensus 85 ~~l~~~g~~~~A~~~~~kAl~l~P~-~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~-P~~~~a~~~L~~~l~~~g~~~ 162 (723)
T 4gyw_A 85 NTLKEMQDVQGALQCYTRAIQINPA-FADAHSNLASIHKDSGNIPEAIASYRTALKLK-PDFPDAYCNLAHCLQIVCDWT 162 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCCT
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHhhhhhHHHhcccHH
Confidence 9999999999999999999887533 68899999999999999999999999999863 235678899999999999999
Q ss_pred HHHHHHHHhhh
Q 021791 278 TWRRLKKKLDE 288 (307)
Q Consensus 278 ~a~~~~~~~~~ 288 (307)
+|.+.+++..+
T Consensus 163 ~A~~~~~kal~ 173 (723)
T 4gyw_A 163 DYDERMKKLVS 173 (723)
T ss_dssp THHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99888887643
No 75
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.46 E-value=4.4e-11 Score=97.51 Aligned_cols=222 Identities=10% Similarity=-0.021 Sum_probs=146.5
Q ss_pred HHHHHHHHHHHHHHHhcCC-CC----CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcC----C-C-CchhhHHHHHHHHH
Q 021791 62 EKTIRNAEKVFDEMRVRGI-EP----DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG----I-C-PTVATYTSVVKCLC 130 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~-~~----~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~----~-~-~~~~~~~~ll~~~~ 130 (307)
.|++++|...|++..+... .+ ...++..+...|...|+++.|...+++..+.. . . ....+++.+...|.
T Consensus 114 ~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~ 193 (378)
T 3q15_A 114 QKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYD 193 (378)
T ss_dssp TTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 4566778887777765310 11 23467777778888888888888887765431 1 1 12456677788888
Q ss_pred hcCChHHHHHHHHHHHhC----CCC-CCHhhHHHHHHHHhcCCChhHHHHHHHHHhh-----cCCCCccHHHHHHHHHHH
Q 021791 131 SCGRIEDAEELLGEMVRN----GVS-PSAETYNCFFKEYRGRKDANGAMKLYRQMKE-----DDLCVPNIHTYNILIGMF 200 (307)
Q Consensus 131 ~~~~~~~a~~~~~~~~~~----~~~-~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~~l~~~~ 200 (307)
..|++++|...+++..+. +.. ....++..+...|...|++++|...+.+... .. +....++..+...+
T Consensus 194 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~--~~~~~~~~~la~~~ 271 (378)
T 3q15_A 194 DFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVP--DLLPKVLFGLSWTL 271 (378)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCG--GGHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCC--hhHHHHHHHHHHHH
Confidence 888888888888776652 111 1134666777788888888888888887766 33 33466777788888
Q ss_pred HhcCcHHHHHHHHHHHhhCC----CCCCHHhHHHHHHHHHccCc---HHHHHHHHHHHHHcCCCCc-HhhHHHHHHHHhh
Q 021791 201 MALNRMDMVREIWNHVKGSE----LGLDLDSYTMLIHGLCEKQK---WKEACQYFVEMIEKGLLPQ-KVTFETLYRGLIQ 272 (307)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~~li~~~~~~g~---~~~a~~~~~~~~~~~~~p~-~~~~~~l~~~~~~ 272 (307)
.+.|++++|...+++..... .+.....+..+...+...++ +.+|+..+++ .+..|+ ...+..+...|..
T Consensus 272 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~ly~~~~~~~~~~~al~~~~~---~~~~~~~~~~~~~la~~y~~ 348 (378)
T 3q15_A 272 CKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDLLSYFEK---KNLHAYIEACARSAAAVFES 348 (378)
T ss_dssp HHTTCHHHHHHHHHHHHHHCCTTCCSCHHHHHHHHHHHHSSSCCHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh---CCChhHHHHHHHHHHHHHHH
Confidence 88888888888888766531 11123345555566666777 6666666665 222232 2356677888889
Q ss_pred chhHHHHHHHHHHhhh
Q 021791 273 SDMLRTWRRLKKKLDE 288 (307)
Q Consensus 273 ~g~~~~a~~~~~~~~~ 288 (307)
.|++++|...+++..+
T Consensus 349 ~g~~~~A~~~~~~al~ 364 (378)
T 3q15_A 349 SCHFEQAAAFYRKVLK 364 (378)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 9999999998887654
No 76
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.45 E-value=4.7e-11 Score=90.12 Aligned_cols=201 Identities=11% Similarity=0.047 Sum_probs=158.0
Q ss_pred CcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCC
Q 021791 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116 (307)
Q Consensus 37 p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~ 116 (307)
.|+..+......+.. .|++++|...|++..+...+++...+..+..++...|++++|++.++...+....
T Consensus 5 ~~~~~~~~~g~~~~~----------~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 74 (228)
T 4i17_A 5 TDPNQLKNEGNDALN----------AKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN 74 (228)
T ss_dssp CCHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHH----------ccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc
Confidence 355777777788888 8899999999999998864478888888999999999999999999999987543
Q ss_pred CchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCH-------hhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCc-
Q 021791 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA-------ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP- 188 (307)
Q Consensus 117 ~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~-------~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~- 188 (307)
+..++..+...|...|++++|...+++..+.... +. ..|..+...+...|++++|...|++..+.. +.
T Consensus 75 -~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--p~~ 150 (228)
T 4i17_A 75 -LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPG-NATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVT--SKK 150 (228)
T ss_dssp -HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSS--CHH
T ss_pred -hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcC--CCc
Confidence 7788999999999999999999999999986443 44 457888888999999999999999999874 44
Q ss_pred -cHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHh
Q 021791 189 -NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261 (307)
Q Consensus 189 -~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~ 261 (307)
+...+..+...+...| ...++.+...+ ..+...|..... ...+.+++|+..+++..+. .|+..
T Consensus 151 ~~~~~~~~l~~~~~~~~-----~~~~~~a~~~~-~~~~~~~~~~~~--~~~~~~~~A~~~~~~a~~l--~p~~~ 214 (228)
T 4i17_A 151 WKTDALYSLGVLFYNNG-----ADVLRKATPLA-SSNKEKYASEKA--KADAAFKKAVDYLGEAVTL--SPNRT 214 (228)
T ss_dssp HHHHHHHHHHHHHHHHH-----HHHHHHHGGGT-TTCHHHHHHHHH--HHHHHHHHHHHHHHHHHHH--CTTCH
T ss_pred ccHHHHHHHHHHHHHHH-----HHHHHHHHhcc-cCCHHHHHHHHH--HHHHHHHHHHHHHHHHhhc--CCCCH
Confidence 5677888888776544 34455555543 224555544443 3456789999999999976 35443
No 77
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.43 E-value=1.1e-10 Score=105.89 Aligned_cols=229 Identities=10% Similarity=0.057 Sum_probs=118.2
Q ss_pred HHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHH
Q 021791 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFS 88 (307)
Q Consensus 9 ~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 88 (307)
.+...+...|.+++|..+|++... .....+.++. . .+++++|.++.++.. +..+|.
T Consensus 1054 eIA~Iai~lglyEEAf~IYkKa~~-----~~~A~~VLie---~----------i~nldrAiE~Aervn------~p~vWs 1109 (1630)
T 1xi4_A 1054 DIANIAISNELFEEAFAIFRKFDV-----NTSAVQVLIE---H----------IGNLDRAYEFAERCN------EPAVWS 1109 (1630)
T ss_pred HHHHHHHhCCCHHHHHHHHHHcCC-----HHHHHHHHHH---H----------HhhHHHHHHHHHhcC------CHHHHH
Confidence 345666777777777777777521 2222233332 2 455666666655431 355566
Q ss_pred HHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCC
Q 021791 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168 (307)
Q Consensus 89 ~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (307)
.+..++...|++++|.+.|.+. -|...|..++.++.+.|++++|.+.+....+.. +++...+.++.+|.+.+
T Consensus 1110 qLAKAql~~G~~kEAIdsYiKA------dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~--~e~~Idt~LafaYAKl~ 1181 (1630)
T 1xi4_A 1110 QLAKAQLQKGMVKEAIDSYIKA------DDPSSYMEVVQAANTSGNWEELVKYLQMARKKA--RESYVETELIFALAKTN 1181 (1630)
T ss_pred HHHHHHHhCCCHHHHHHHHHhc------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc--ccccccHHHHHHHHhhc
Confidence 6666666666666666666442 255556666666666666666666666555433 12222223555555555
Q ss_pred ChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHH
Q 021791 169 DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248 (307)
Q Consensus 169 ~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~ 248 (307)
++++...+. . .++...|..+...|...|++++|..+|..+ ..|..+..+|.+.|++++|.+.+
T Consensus 1182 rleele~fI----~----~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA---------~ny~rLA~tLvkLge~q~AIEaa 1244 (1630)
T 1xi4_A 1182 RLAELEEFI----N----GPNNAHIQQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLASTLVHLGEYQAAVDGA 1244 (1630)
T ss_pred CHHHHHHHH----h----CCCHHHHHHHHHHHHhcCCHHHHHHHHHhh---------hHHHHHHHHHHHhCCHHHHHHHH
Confidence 555322221 1 233334444555555555555555555542 24444444455445555544444
Q ss_pred HHHHHc------------------------CCCCcHhhHHHHHHHHhhchhHHHHHHHHHHh
Q 021791 249 VEMIEK------------------------GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286 (307)
Q Consensus 249 ~~~~~~------------------------~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~ 286 (307)
++..+. ++..++..+..++..|.+.|.+++|..+++.-
T Consensus 1245 rKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~a 1306 (1630)
T 1xi4_A 1245 RKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAA 1306 (1630)
T ss_pred HHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 433111 11223444556666666666676666666554
No 78
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.43 E-value=3.4e-12 Score=99.33 Aligned_cols=161 Identities=12% Similarity=0.043 Sum_probs=125.7
Q ss_pred HHhcCCchhHHHHHHHHHHc-------CCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhC------CC-CCCHhhHHH
Q 021791 94 YSRAHKPQLSLDKLNFMKEK-------GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN------GV-SPSAETYNC 159 (307)
Q Consensus 94 ~~~~~~~~~a~~~~~~~~~~-------~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~------~~-~~~~~~~~~ 159 (307)
....|++++|...+++..+. ..+....++..+...|...|++++|...+++.... +. .....++..
T Consensus 11 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 90 (283)
T 3edt_B 11 SSGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNN 90 (283)
T ss_dssp --CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHH
Confidence 34577888888888777552 22234677889999999999999999999998764 22 223567888
Q ss_pred HHHHHhcCCChhHHHHHHHHHhhc------CCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhC------CCCC-CHH
Q 021791 160 FFKEYRGRKDANGAMKLYRQMKED------DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS------ELGL-DLD 226 (307)
Q Consensus 160 l~~~~~~~~~~~~a~~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~------~~~~-~~~ 226 (307)
+...|...|++++|...+.+.... ...+....++..+...+...|++++|...++++... +..| ...
T Consensus 91 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 170 (283)
T 3edt_B 91 LAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAK 170 (283)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHH
Confidence 999999999999999999988765 111345678889999999999999999999988764 1122 345
Q ss_pred hHHHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 227 SYTMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 227 ~~~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
++..+..+|...|++++|...+++..+.
T Consensus 171 ~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 171 TKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 7888999999999999999999998764
No 79
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.43 E-value=2.4e-11 Score=95.39 Aligned_cols=238 Identities=13% Similarity=0.049 Sum_probs=159.7
Q ss_pred hhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCc
Q 021791 21 DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP 100 (307)
Q Consensus 21 ~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 100 (307)
.+|.+++.+..+. .+++...| .++ +.+ . .+++++|...|++. ...|...|++
T Consensus 2 ~~a~~~~~~a~k~-~~~~~~~~-~~~----~~~--~-----~~~~~~A~~~~~~a---------------~~~~~~~g~~ 53 (292)
T 1qqe_A 2 SDPVELLKRAEKK-GVPSSGFM-KLF----SGS--D-----SYKFEEAADLCVQA---------------ATIYRLRKEL 53 (292)
T ss_dssp CCHHHHHHHHHHH-SSCCCTHH-HHH----SCC--S-----HHHHHHHHHHHHHH---------------HHHHHHTTCT
T ss_pred CcHHHHHHHHHHH-hCcCCCcc-hhc----CCC--C-----CccHHHHHHHHHHH---------------HHHHHHcCCH
Confidence 4577777777665 23322223 222 200 0 23478888887776 3457788999
Q ss_pred hhHHHHHHHHHHc----CCCCc-hhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCC-CC----HhhHHHHHHHHhcC-CC
Q 021791 101 QLSLDKLNFMKEK----GICPT-VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS-PS----AETYNCFFKEYRGR-KD 169 (307)
Q Consensus 101 ~~a~~~~~~~~~~----~~~~~-~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~-~~----~~~~~~l~~~~~~~-~~ 169 (307)
++|...|.+..+. |-.++ ..+|+.+..+|.+.|++++|...+++....... .+ ..+++.+...|... |+
T Consensus 54 ~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~ 133 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHD 133 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcC
Confidence 9999998877553 22212 567888999999999999999999887653111 01 35778888888886 99
Q ss_pred hhHHHHHHHHHhhcCCC--Cc--cHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCH------HhHHHHHHHHHccC
Q 021791 170 ANGAMKLYRQMKEDDLC--VP--NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL------DSYTMLIHGLCEKQ 239 (307)
Q Consensus 170 ~~~a~~~~~~~~~~~~~--~~--~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~------~~~~~li~~~~~~g 239 (307)
+++|...|++..+.... .+ ...++..+...+...|++++|...++........... ..|..+..++...|
T Consensus 134 ~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g 213 (292)
T 1qqe_A 134 YAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAAT 213 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcC
Confidence 99999999888764210 01 1356788889999999999999999998876433222 15677778888899
Q ss_pred cHHHHHHHHHHHHHcCCCCcHh------hHHHHHHHHh--hchhHHHHHHHHHHhhh
Q 021791 240 KWKEACQYFVEMIEKGLLPQKV------TFETLYRGLI--QSDMLRTWRRLKKKLDE 288 (307)
Q Consensus 240 ~~~~a~~~~~~~~~~~~~p~~~------~~~~l~~~~~--~~g~~~~a~~~~~~~~~ 288 (307)
++++|...|++.++. .|+.. .+..++.++. ..+++++|...++++.+
T Consensus 214 ~~~~A~~~~~~al~l--~p~~~~~~~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~~~ 268 (292)
T 1qqe_A 214 DAVAAARTLQEGQSE--DPNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMR 268 (292)
T ss_dssp CHHHHHHHHHGGGCC-----------HHHHHHHHHHHHTTCTTTHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHHHhh--CCCCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCc
Confidence 999999999988753 33321 2444555554 45678888888766644
No 80
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.43 E-value=2.4e-12 Score=102.67 Aligned_cols=241 Identities=11% Similarity=-0.006 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHhcCchhhHHHHHHHHHhc----CCCC-cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhc
Q 021791 4 VKMYTSLIYGWCKINRIDMAERFLGEMIER----GVEP-NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78 (307)
Q Consensus 4 ~~~~~~li~~~~~~g~~~~a~~~~~~~~~~----~~~p-~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 78 (307)
...|..+...+...|++++|.+.+++.... +..| ....+..+...+.. .|++++|...+++..+.
T Consensus 43 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----------~g~~~~A~~~~~~al~~ 112 (338)
T 3ro2_A 43 SAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKV----------LGNFDEAIVCCQRHLDI 112 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHH----------ccCHHHHHHHHHHHHHH
Confidence 467888999999999999999999987543 2222 24567777778888 77888888888877553
Q ss_pred CC-CCC----HHHHHHHHHHHHhcCC--------------------chhHHHHHHHHHHc----CC-CCchhhHHHHHHH
Q 021791 79 GI-EPD----VTSFSIVLHVYSRAHK--------------------PQLSLDKLNFMKEK----GI-CPTVATYTSVVKC 128 (307)
Q Consensus 79 ~~-~~~----~~~~~~ll~~~~~~~~--------------------~~~a~~~~~~~~~~----~~-~~~~~~~~~ll~~ 128 (307)
.. .++ ..++..+...+...|+ +++|.+.+++..+. +. .....++..+...
T Consensus 113 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~ 192 (338)
T 3ro2_A 113 SRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNT 192 (338)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 10 112 3478888899999999 89999988876543 11 1124567888899
Q ss_pred HHhcCChHHHHHHHHHHHhCCCC-C----CHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCc----cHHHHHHHHHH
Q 021791 129 LCSCGRIEDAEELLGEMVRNGVS-P----SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP----NIHTYNILIGM 199 (307)
Q Consensus 129 ~~~~~~~~~a~~~~~~~~~~~~~-~----~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~~~~~~l~~~ 199 (307)
+...|++++|...+++....... + ...++..+...+...|++++|...+++......... ...++..+...
T Consensus 193 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~ 272 (338)
T 3ro2_A 193 HYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNT 272 (338)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Confidence 99999999999999988653111 1 133778888899999999999999998765421011 15677888999
Q ss_pred HHhcCcHHHHHHHHHHHhhCC----CC-CCHHhHHHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 200 FMALNRMDMVREIWNHVKGSE----LG-LDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~----~~-~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
+...|++++|...++...... .. ....++..+...|...|++++|...+++..+.
T Consensus 273 ~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 332 (338)
T 3ro2_A 273 YTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI 332 (338)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred HHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 999999999999998876531 11 11346778899999999999999999998865
No 81
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.41 E-value=2.5e-10 Score=103.62 Aligned_cols=203 Identities=9% Similarity=0.051 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCC
Q 021791 4 VKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPD 83 (307)
Q Consensus 4 ~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 83 (307)
..+|..+..++...|++++|.+.|.+. -|...|..++.++.+ .|++++|.+.|....+.. ++
T Consensus 1105 p~vWsqLAKAql~~G~~kEAIdsYiKA------dD~say~eVa~~~~~----------lGkyEEAIeyL~mArk~~--~e 1166 (1630)
T 1xi4_A 1105 PAVWSQLAKAQLQKGMVKEAIDSYIKA------DDPSSYMEVVQAANT----------SGNWEELVKYLQMARKKA--RE 1166 (1630)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhc------CChHHHHHHHHHHHH----------cCCHHHHHHHHHHHHhhc--cc
Confidence 445666666666666666666666432 245555556666666 555666666665554432 22
Q ss_pred HHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHH
Q 021791 84 VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163 (307)
Q Consensus 84 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (307)
+...+.++.+|++.++++....++ + .++...|..+...|...|++++|...|... ..|..+...
T Consensus 1167 ~~Idt~LafaYAKl~rleele~fI----~---~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA---------~ny~rLA~t 1230 (1630)
T 1xi4_A 1167 SYVETELIFALAKTNRLAELEEFI----N---GPNNAHIQQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLAST 1230 (1630)
T ss_pred ccccHHHHHHHHhhcCHHHHHHHH----h---CCCHHHHHHHHHHHHhcCCHHHHHHHHHhh---------hHHHHHHHH
Confidence 222223555555555554322221 1 123344555566666666666666666553 255566666
Q ss_pred HhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHH
Q 021791 164 YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE 243 (307)
Q Consensus 164 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~ 243 (307)
+.+.|++++|.+.+++.. +..+|..+..+|...|++..|......+ ..+...+..++..|.+.|.+++
T Consensus 1231 LvkLge~q~AIEaarKA~-------n~~aWkev~~acve~~Ef~LA~~cgl~I-----iv~~deLeeli~yYe~~G~feE 1298 (1630)
T 1xi4_A 1231 LVHLGEYQAAVDGARKAN-------STRTWKEVCFACVDGKEFRLAQMCGLHI-----VVHADELEELINYYQDRGYFEE 1298 (1630)
T ss_pred HHHhCCHHHHHHHHHHhC-------CHHHHHHHHHHHhhhhHHHHHHHHHHhh-----hcCHHHHHHHHHHHHHcCCHHH
Confidence 666666666666665542 2233333333333333333333332211 1133444455555556666666
Q ss_pred HHHHHHHHH
Q 021791 244 ACQYFVEMI 252 (307)
Q Consensus 244 a~~~~~~~~ 252 (307)
|+.+++..+
T Consensus 1299 AI~LlE~aL 1307 (1630)
T 1xi4_A 1299 LITMLEAAL 1307 (1630)
T ss_pred HHHHHHHHh
Confidence 666665544
No 82
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.38 E-value=1e-10 Score=95.27 Aligned_cols=231 Identities=6% Similarity=-0.079 Sum_probs=171.1
Q ss_pred HHHHHHHhcCchhhHHHHHHHHHhcC-CCC----cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhc----C
Q 021791 9 SLIYGWCKINRIDMAERFLGEMIERG-VEP----NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR----G 79 (307)
Q Consensus 9 ~li~~~~~~g~~~~a~~~~~~~~~~~-~~p----~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~ 79 (307)
.....+...|++++|...|++..+.. ..+ ...++..+...+.. .|+++.|...+++..+. +
T Consensus 106 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~----------~~~~~~A~~~~~~al~~~~~~~ 175 (378)
T 3q15_A 106 FRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYH----------MKQTHVSMYHILQALDIYQNHP 175 (378)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHH----------cCCcHHHHHHHHHHHHHHHhCC
Confidence 34556678999999999999987641 112 24567777778888 67778888887776543 1
Q ss_pred -CCC-CHHHHHHHHHHHHhcCCchhHHHHHHHHHHc----CCC-CchhhHHHHHHHHHhcCChHHHHHHHHHHHh-----
Q 021791 80 -IEP-DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK----GIC-PTVATYTSVVKCLCSCGRIEDAEELLGEMVR----- 147 (307)
Q Consensus 80 -~~~-~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~----~~~-~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~----- 147 (307)
..+ ...+++.+..+|...|++++|.+.+++..+. +.. ....++..+..+|...|++++|...+++...
T Consensus 176 ~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 255 (378)
T 3q15_A 176 LYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK 255 (378)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Confidence 111 2557888999999999999999999887653 211 1245678899999999999999999999887
Q ss_pred CCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCC---CccHHHHHHHHHHHHhcCc---HHHHHHHHHHHhhCCC
Q 021791 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC---VPNIHTYNILIGMFMALNR---MDMVREIWNHVKGSEL 221 (307)
Q Consensus 148 ~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~---~~~a~~~~~~~~~~~~ 221 (307)
.... ...++..+...+.+.|++++|...+++....... +.....+..+...+...++ +.+|...++... .
T Consensus 256 ~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~ly~~~~~~~~~~~al~~~~~~~---~ 331 (378)
T 3q15_A 256 VPDL-LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDLLSYFEKKN---L 331 (378)
T ss_dssp CGGG-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHTT---C
T ss_pred CChh-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhCC---C
Confidence 4333 3678888999999999999999999998765321 2234456666667777788 777777776632 2
Q ss_pred CC-CHHhHHHHHHHHHccCcHHHHHHHHHHHHH
Q 021791 222 GL-DLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253 (307)
Q Consensus 222 ~~-~~~~~~~li~~~~~~g~~~~a~~~~~~~~~ 253 (307)
.| ....+..+...|...|++++|...|++..+
T Consensus 332 ~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~ 364 (378)
T 3q15_A 332 HAYIEACARSAAAVFESSCHFEQAAAFYRKVLK 364 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 22 234567788999999999999999998865
No 83
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.36 E-value=2.9e-09 Score=88.84 Aligned_cols=260 Identities=11% Similarity=0.035 Sum_probs=178.6
Q ss_pred HHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCH
Q 021791 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84 (307)
Q Consensus 5 ~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 84 (307)
..+..+...|...+.++++.+....+.+.....+...+..|-..+...|. ..+.++|++.|++..+.| .++.
T Consensus 142 ~a~~~Lg~~y~~~~~~~~~~~~a~~~~~~a~~~~~~a~~~Lg~~~~~~g~-------~~~~~~A~~~~~~aa~~g-~~~a 213 (452)
T 3e4b_A 142 EAGLAQVLLYRTQGTYDQHLDDVERICKAALNTTDICYVELATVYQKKQQ-------PEQQAELLKQMEAGVSRG-TVTA 213 (452)
T ss_dssp THHHHHHHHHHHHTCGGGGHHHHHHHHHHHTTTCTTHHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHTT-CSCH
T ss_pred HHHHHHHHHHHcCCCcccCHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-------cccHHHHHHHHHHHHHCC-CHHH
Confidence 34455666666666555555544443333222233467777777777332 348899999999988887 4466
Q ss_pred HHHHHHHHHHHhc----CCchhHHHHHHHHHHcCCCCchhhHHHHHHH-H--HhcCChHHHHHHHHHHHhCCCCCCHhhH
Q 021791 85 TSFSIVLHVYSRA----HKPQLSLDKLNFMKEKGICPTVATYTSVVKC-L--CSCGRIEDAEELLGEMVRNGVSPSAETY 157 (307)
Q Consensus 85 ~~~~~ll~~~~~~----~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~-~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 157 (307)
..+..|...|... +++++|.+.|+... .| +...+..+... + ...+++++|...|++..+.| +...+
T Consensus 214 ~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g---~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~ 286 (452)
T 3e4b_A 214 QRVDSVARVLGDATLGTPDEKTAQALLEKIA-PG---YPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD---QPRAE 286 (452)
T ss_dssp HHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-GG---STHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT---CHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-CC---CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC---CHHHH
Confidence 6656677777554 68889999998887 33 55666667666 4 56889999999999988765 66677
Q ss_pred HHHHHHHhcCC-----ChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHh----cCcHHHHHHHHHHHhhCCCCCCHHhH
Q 021791 158 NCFFKEYRGRK-----DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA----LNRMDMVREIWNHVKGSELGLDLDSY 228 (307)
Q Consensus 158 ~~l~~~~~~~~-----~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~ 228 (307)
..+...|. .| ++++|...|++.. .+ +...+..|...|.. ..+.++|.+.|+...+.| +....
T Consensus 287 ~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa-~g----~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g---~~~A~ 357 (452)
T 3e4b_A 287 LLLGKLYY-EGKWVPADAKAAEAHFEKAV-GR----EVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNG---QNSAD 357 (452)
T ss_dssp HHHHHHHH-HCSSSCCCHHHHHHHHHTTT-TT----CHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTT---CTTHH
T ss_pred HHHHHHHH-cCCCCCCCHHHHHHHHHHHh-CC----CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhC---hHHHH
Confidence 77777776 44 8899999998887 33 45666777777765 348899999999988876 34455
Q ss_pred HHHHHHHHc----cCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhhc
Q 021791 229 TMLIHGLCE----KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289 (307)
Q Consensus 229 ~~li~~~~~----~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~ 289 (307)
..+...|.. ..+.++|..+|+...+.|. ++.......+......++.++|.++.++..+.
T Consensus 358 ~~Lg~~y~~G~g~~~d~~~A~~~~~~A~~~g~-~~a~~~l~~l~~~~~~~~~~~a~~~~~~~~~~ 421 (452)
T 3e4b_A 358 FAIAQLFSQGKGTKPDPLNAYVFSQLAKAQDT-PEANDLATQLEAPLTPAQRAEGQRLVQQELAA 421 (452)
T ss_dssp HHHHHHHHSCTTBCCCHHHHHHHHHHHHTTCC-HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHCCC-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 666666653 4588999999999988874 34444444444455667888888888876554
No 84
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.35 E-value=5.1e-11 Score=91.92 Aligned_cols=193 Identities=7% Similarity=0.004 Sum_probs=143.7
Q ss_pred CCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCc---hhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCC-C-CHh
Q 021791 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT---VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS-P-SAE 155 (307)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~-~-~~~ 155 (307)
+.+...+..+...+.+.|++++|...|+.+.+.... + ...+..+..+|.+.|++++|...|++..+..+. | ...
T Consensus 12 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~ 90 (261)
T 3qky_A 12 HSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQ 90 (261)
T ss_dssp CSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHH
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHH
Confidence 346677788888999999999999999999887432 3 667888999999999999999999999886432 1 245
Q ss_pred hHHHHHHHHhc--------CCChhHHHHHHHHHhhcCCCCccHHHH-----------------HHHHHHHHhcCcHHHHH
Q 021791 156 TYNCFFKEYRG--------RKDANGAMKLYRQMKEDDLCVPNIHTY-----------------NILIGMFMALNRMDMVR 210 (307)
Q Consensus 156 ~~~~l~~~~~~--------~~~~~~a~~~~~~~~~~~~~~~~~~~~-----------------~~l~~~~~~~~~~~~a~ 210 (307)
.+..+..++.. .|++++|...|+++.... +.+.... ..+...|...|++++|.
T Consensus 91 a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~--p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 168 (261)
T 3qky_A 91 AEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY--PNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAA 168 (261)
T ss_dssp HHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC--TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC--cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence 67777788888 999999999999998874 3333333 55678888999999999
Q ss_pred HHHHHHhhCCCCC--CHHhHHHHHHHHHcc----------CcHHHHHHHHHHHHHcCCCCcHh----hHHHHHHHHhhch
Q 021791 211 EIWNHVKGSELGL--DLDSYTMLIHGLCEK----------QKWKEACQYFVEMIEKGLLPQKV----TFETLYRGLIQSD 274 (307)
Q Consensus 211 ~~~~~~~~~~~~~--~~~~~~~li~~~~~~----------g~~~~a~~~~~~~~~~~~~p~~~----~~~~l~~~~~~~g 274 (307)
..++.+....... ....+..+..+|... |++++|...|+++++. .|+.. ....+-..+...+
T Consensus 169 ~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~--~p~~~~~~~a~~~l~~~~~~~~ 246 (261)
T 3qky_A 169 VTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQI--FPDSPLLRTAEELYTRARQRLT 246 (261)
T ss_dssp HHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHH--CTTCTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHH--CCCChHHHHHHHHHHHHHHHHH
Confidence 9999988753221 245677777788765 8899999999999876 35442 3333344444444
Q ss_pred hHHH
Q 021791 275 MLRT 278 (307)
Q Consensus 275 ~~~~ 278 (307)
++++
T Consensus 247 ~~~~ 250 (261)
T 3qky_A 247 ELEG 250 (261)
T ss_dssp HHHT
T ss_pred Hhhh
Confidence 4443
No 85
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.33 E-value=1.1e-10 Score=97.35 Aligned_cols=157 Identities=9% Similarity=0.028 Sum_probs=91.5
Q ss_pred hhHHHHHHHHHhcC---ChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcC----CChhHHHHHHHHHhhcCCCCccHHH
Q 021791 120 ATYTSVVKCLCSCG---RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR----KDANGAMKLYRQMKEDDLCVPNIHT 192 (307)
Q Consensus 120 ~~~~~ll~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~a~~~~~~~~~~~~~~~~~~~ 192 (307)
..+..+...|...| +.++|+..|++..+.|.. +...+..+...|... +++++|...|++.. .+ +...
T Consensus 177 ~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g----~~~a 250 (452)
T 3e4b_A 177 ICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PG----YPAS 250 (452)
T ss_dssp THHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-GG----STHH
T ss_pred HHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-CC----CHHH
Confidence 35556666666666 666666666666666533 444444455555443 56667777776665 32 2334
Q ss_pred HHHHHHH-H--HhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccC-----cHHHHHHHHHHHHHcCCCCcHhhHH
Q 021791 193 YNILIGM-F--MALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ-----KWKEACQYFVEMIEKGLLPQKVTFE 264 (307)
Q Consensus 193 ~~~l~~~-~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g-----~~~~a~~~~~~~~~~~~~p~~~~~~ 264 (307)
+..|... + ...++.++|.+.|++..+.| +...+..+...|. .| ++++|...|++.. .| ++....
T Consensus 251 ~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa-~g---~~~A~~ 322 (452)
T 3e4b_A 251 WVSLAQLLYDFPELGDVEQMMKYLDNGRAAD---QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV-GR---EVAADY 322 (452)
T ss_dssp HHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT-TT---CHHHHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh-CC---CHHHHH
Confidence 4444444 2 34667777777777766654 5556666666555 44 6777777777665 22 444455
Q ss_pred HHHHHHhh----chhHHHHHHHHHHhhhcC
Q 021791 265 TLYRGLIQ----SDMLRTWRRLKKKLDEES 290 (307)
Q Consensus 265 ~l~~~~~~----~g~~~~a~~~~~~~~~~~ 290 (307)
.|...|.. ..+.++|..++++..+.|
T Consensus 323 ~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 352 (452)
T 3e4b_A 323 YLGQIYRRGYLGKVYPQKALDHLLTAARNG 352 (452)
T ss_dssp HHHHHHHTTTTSSCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHCCCCCCcCHHHHHHHHHHHHhhC
Confidence 55555544 237777777777766554
No 86
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.33 E-value=1.9e-09 Score=83.64 Aligned_cols=144 Identities=9% Similarity=0.030 Sum_probs=68.5
Q ss_pred HHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCC-CCCHhhHHHHHHHHhcCCChhHHHHHHHHHh
Q 021791 103 SLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV-SPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181 (307)
Q Consensus 103 a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~ 181 (307)
+...+++....+ .++..++..+..++...|++++|++++.+....+. .-+...+..++..+.+.|+.+.|.+.++.|.
T Consensus 85 a~~~l~~l~~~~-~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~ 163 (310)
T 3mv2_B 85 NIEELENLLKDK-QNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYT 163 (310)
T ss_dssp CCHHHHHTTTTS-CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC-CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 344444444433 22334444555555555555555555555544332 1134455555555555555555555555555
Q ss_pred hcCCCCc-----cHHHHHHHHHHHH--hcC--cHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHH
Q 021791 182 EDDLCVP-----NIHTYNILIGMFM--ALN--RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252 (307)
Q Consensus 182 ~~~~~~~-----~~~~~~~l~~~~~--~~~--~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~ 252 (307)
+. .| +..+...|+.++. ..| +..+|..+|+++... .|+..+-..++.++.+.|++++|...++.+.
T Consensus 164 ~~---~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~--~p~~~~~~lLln~~~~~g~~~eAe~~L~~l~ 238 (310)
T 3mv2_B 164 NA---IEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQT--FPTWKTQLGLLNLHLQQRNIAEAQGIVELLL 238 (310)
T ss_dssp HH---SCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT--SCSHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hc---CccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh--CCCcccHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44 23 2333444443322 122 555555555555443 2332222233335555555555555555443
No 87
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.32 E-value=2.6e-10 Score=77.96 Aligned_cols=125 Identities=15% Similarity=0.212 Sum_probs=53.7
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhc
Q 021791 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL 203 (307)
Q Consensus 124 ~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 203 (307)
.+...+...|++++|..+++++...+.. +...+..+...+...|++++|...++++.... +.+...+..+...+...
T Consensus 6 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~l~~~~~~~ 82 (136)
T 2fo7_A 6 NLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--PRSAEAWYNLGNAYYKQ 82 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHC--CCchHHHHHHHHHHHHh
Confidence 3344444444444444444444433211 33334444444444444444444444444332 23333444444444444
Q ss_pred CcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHH
Q 021791 204 NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252 (307)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~ 252 (307)
|++++|.+.++.+.... +.+...+..+...+...|++++|...++++.
T Consensus 83 ~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 130 (136)
T 2fo7_A 83 GDYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQGDYDEAIEYYQKAL 130 (136)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 44444444444444332 1133344444444444455555554444444
No 88
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.31 E-value=3.3e-10 Score=77.47 Aligned_cols=130 Identities=13% Similarity=0.131 Sum_probs=112.6
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHh
Q 021791 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR 165 (307)
Q Consensus 86 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (307)
.|..+...+...|++++|.++++.+.+.+. .+...+..+...+...|++++|...++++...+. .+...+..+...+.
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDP-RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-RSAEAWYNLGNAYY 80 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCC-cchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCC-CchHHHHHHHHHHH
Confidence 567788889999999999999999987753 3677888899999999999999999999987653 36778888999999
Q ss_pred cCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhC
Q 021791 166 GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219 (307)
Q Consensus 166 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 219 (307)
..|++++|...++++.... +.+..++..+...+...|++++|...++.+...
T Consensus 81 ~~~~~~~A~~~~~~~~~~~--~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELD--PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 9999999999999998875 556788889999999999999999999988765
No 89
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.31 E-value=2.5e-10 Score=84.87 Aligned_cols=169 Identities=8% Similarity=0.035 Sum_probs=121.8
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHH----------------HHHHHHhcCChHHHHHHHHHHHhCC
Q 021791 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTS----------------VVKCLCSCGRIEDAEELLGEMVRNG 149 (307)
Q Consensus 86 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~----------------ll~~~~~~~~~~~a~~~~~~~~~~~ 149 (307)
.+......+...|++++|...|+...+.... +...|.. +..+|.+.|++++|...|++..+..
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 84 (208)
T 3urz_A 6 EMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKA 84 (208)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 3444555667888888888888888776422 4455555 8888999999999999999998875
Q ss_pred CCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCc--HHHHHHHHHHHhhCCCCCCHH-
Q 021791 150 VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR--MDMVREIWNHVKGSELGLDLD- 226 (307)
Q Consensus 150 ~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~a~~~~~~~~~~~~~~~~~- 226 (307)
+. +...+..+...+...|++++|...|++..+.. +.+..++..+..+|...|+ .+.+...++... .|+..
T Consensus 85 p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 157 (208)
T 3urz_A 85 PN-NVDCLEACAEMQVCRGQEKDALRMYEKILQLE--ADNLAANIFLGNYYYLTAEQEKKKLETDYKKLS----SPTKMQ 157 (208)
T ss_dssp TT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCCHHH
T ss_pred CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh----CCCchh
Confidence 44 77888889999999999999999999998876 6678888888888766554 344455555543 23333
Q ss_pred -hHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHH
Q 021791 227 -SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFE 264 (307)
Q Consensus 227 -~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~ 264 (307)
.+.....++...|++++|...|++.++ +.|+.....
T Consensus 158 ~a~~~~g~~~~~~~~~~~A~~~~~~al~--l~P~~~~~~ 194 (208)
T 3urz_A 158 YARYRDGLSKLFTTRYEKARNSLQKVIL--RFPSTEAQK 194 (208)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHTT--TSCCHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHH--hCCCHHHHH
Confidence 334445556677899999999999885 467755433
No 90
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.30 E-value=5e-10 Score=87.86 Aligned_cols=207 Identities=9% Similarity=-0.018 Sum_probs=145.0
Q ss_pred chhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhc----CCCC-CHHHHHHHHHH
Q 021791 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR----GIEP-DVTSFSIVLHV 93 (307)
Q Consensus 19 ~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~~~-~~~~~~~ll~~ 93 (307)
++++|.+.|++.. ..+.. .|++++|...|++..+. |-++ ...+|+.+..+
T Consensus 32 ~~~~A~~~~~~a~---------------~~~~~----------~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~ 86 (292)
T 1qqe_A 32 KFEEAADLCVQAA---------------TIYRL----------RKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKC 86 (292)
T ss_dssp HHHHHHHHHHHHH---------------HHHHH----------TTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH---------------HHHHH----------cCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4888888887762 23555 45556666666655442 2222 38889999999
Q ss_pred HHhcCCchhHHHHHHHHHHcCC---CC--chhhHHHHHHHHHhc-CChHHHHHHHHHHHhCCCCC-C----HhhHHHHHH
Q 021791 94 YSRAHKPQLSLDKLNFMKEKGI---CP--TVATYTSVVKCLCSC-GRIEDAEELLGEMVRNGVSP-S----AETYNCFFK 162 (307)
Q Consensus 94 ~~~~~~~~~a~~~~~~~~~~~~---~~--~~~~~~~ll~~~~~~-~~~~~a~~~~~~~~~~~~~~-~----~~~~~~l~~ 162 (307)
|...|++++|+..+++..+... .+ -..++..+...|... |++++|+..|++..+..... + ..++..+..
T Consensus 87 ~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~ 166 (292)
T 1qqe_A 87 FKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCAD 166 (292)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 9999999999998888765421 11 145788888999986 99999999999887642111 1 356888889
Q ss_pred HHhcCCChhHHHHHHHHHhhcCCCCccH-----HHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCH------HhHHHH
Q 021791 163 EYRGRKDANGAMKLYRQMKEDDLCVPNI-----HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL------DSYTML 231 (307)
Q Consensus 163 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~------~~~~~l 231 (307)
.+...|++++|...|++......-.+.. ..+..+..++...|++++|...+++..... |+. ..+..+
T Consensus 167 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~--p~~~~~~~~~~l~~l 244 (292)
T 1qqe_A 167 LKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSED--PNFADSRESNFLKSL 244 (292)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-----------HHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CCCCCcHHHHHHHHH
Confidence 9999999999999999988764211221 256778888889999999999999987642 321 134455
Q ss_pred HHHHH--ccCcHHHHHHHHHHHH
Q 021791 232 IHGLC--EKQKWKEACQYFVEMI 252 (307)
Q Consensus 232 i~~~~--~~g~~~~a~~~~~~~~ 252 (307)
+.++. ..+++++|+..|+++.
T Consensus 245 ~~~~~~~~~~~~~~A~~~~~~~~ 267 (292)
T 1qqe_A 245 IDAVNEGDSEQLSEHCKEFDNFM 267 (292)
T ss_dssp HHHHHTTCTTTHHHHHHHHTTSS
T ss_pred HHHHHcCCHHHHHHHHHHhccCC
Confidence 66664 4567889998887765
No 91
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.28 E-value=1.2e-09 Score=88.84 Aligned_cols=239 Identities=8% Similarity=0.001 Sum_probs=169.8
Q ss_pred HHHHHHHHHHhcCchhhHHHHHHHHHhcCC-CCc----HHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhc--
Q 021791 6 MYTSLIYGWCKINRIDMAERFLGEMIERGV-EPN----VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR-- 78 (307)
Q Consensus 6 ~~~~li~~~~~~g~~~~a~~~~~~~~~~~~-~p~----~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-- 78 (307)
+++.+...+...|++++|.+.+++...... .++ ..++..+...+.. .|++++|...+++..+.
T Consensus 55 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----------~G~~~~A~~~~~~al~~~~ 124 (373)
T 1hz4_A 55 ATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA----------QGFLQTAWETQEKAFQLIN 124 (373)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH----------CCCHHHHHHHHHHHHHHHH
Confidence 567778889999999999999998875311 111 2234556666677 77788888888877653
Q ss_pred --CCC--C-CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCC----chhhHHHHHHHHHhcCChHHHHHHHHHHHhCC
Q 021791 79 --GIE--P-DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP----TVATYTSVVKCLCSCGRIEDAEELLGEMVRNG 149 (307)
Q Consensus 79 --~~~--~-~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~ 149 (307)
+.. | ....+..+...+...|++++|...+++..+..... ...++..+...+...|++++|...+++.....
T Consensus 125 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 125 EQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLL 204 (373)
T ss_dssp HTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 222 2 34466778889999999999999999887653221 23567788889999999999999999887542
Q ss_pred CCCCH-hhHH-----HHHHHHhcCCChhHHHHHHHHHhhcCCCC--ccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhC--
Q 021791 150 VSPSA-ETYN-----CFFKEYRGRKDANGAMKLYRQMKEDDLCV--PNIHTYNILIGMFMALNRMDMVREIWNHVKGS-- 219 (307)
Q Consensus 150 ~~~~~-~~~~-----~l~~~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~-- 219 (307)
..++. ..+. ..+..+...|++++|...+++........ .....+..+...+...|++++|...++.....
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~ 284 (373)
T 1hz4_A 205 GNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENAR 284 (373)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hccCcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCCCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 12111 1221 23344779999999999999987654211 11335677888999999999999999887542
Q ss_pred --CCCCCH-HhHHHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 220 --ELGLDL-DSYTMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 220 --~~~~~~-~~~~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
+..++. ..+..+..++...|+.++|...+++....
T Consensus 285 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~al~~ 322 (373)
T 1hz4_A 285 SLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKL 322 (373)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hCcchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 211122 25666778888999999999999988654
No 92
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.28 E-value=1.3e-09 Score=84.61 Aligned_cols=184 Identities=7% Similarity=0.023 Sum_probs=137.5
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCC-CCchhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 021791 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI-CPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146 (307)
Q Consensus 68 a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~ 146 (307)
++..|++..+.+ .++..++..+..++...|++++|++++.+....+. .-+...+..++..+.+.|+.+.|.+.+++|.
T Consensus 85 a~~~l~~l~~~~-~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~ 163 (310)
T 3mv2_B 85 NIEELENLLKDK-QNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYT 163 (310)
T ss_dssp CCHHHHHTTTTS-CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC-CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 445566655544 45666677889999999999999999999877654 2377788899999999999999999999998
Q ss_pred hCCCCC-----CHhhHHHHHHHH----hcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHh
Q 021791 147 RNGVSP-----SAETYNCFFKEY----RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217 (307)
Q Consensus 147 ~~~~~~-----~~~~~~~l~~~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~ 217 (307)
+. .| +..+...+..++ ...++..+|..+|+++... .|+..+...++.++.+.|++++|.+.++.+.
T Consensus 164 ~~--~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~---~p~~~~~~lLln~~~~~g~~~eAe~~L~~l~ 238 (310)
T 3mv2_B 164 NA--IEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQT---FPTWKTQLGLLNLHLQQRNIAEAQGIVELLL 238 (310)
T ss_dssp HH--SCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT---SCSHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hc--CccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh---CCCcccHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 75 44 245555555552 2344899999999999776 5654444555568999999999999999766
Q ss_pred hCC---------CCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHh
Q 021791 218 GSE---------LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261 (307)
Q Consensus 218 ~~~---------~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~ 261 (307)
+.. -+-+..+...+|......|+ +|.++++++.+. .|+..
T Consensus 239 ~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~--~P~hp 287 (310)
T 3mv2_B 239 SDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKL--DHEHA 287 (310)
T ss_dssp SHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHT--TCCCH
T ss_pred HhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHh--CCCCh
Confidence 531 02366677566666666776 889999999875 45543
No 93
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.25 E-value=3.9e-09 Score=78.60 Aligned_cols=178 Identities=10% Similarity=0.023 Sum_probs=140.8
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcC----ChHHHHHH
Q 021791 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG----RIEDAEEL 141 (307)
Q Consensus 66 ~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~----~~~~a~~~ 141 (307)
.+|.+.|++..+.| +...+..+...|...+++++|.+.|++..+.| +...+..+...|.. + ++++|...
T Consensus 3 ~eA~~~~~~aa~~g---~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g---~~~a~~~lg~~y~~-~g~~~~~~~A~~~ 75 (212)
T 3rjv_A 3 TEPGSQYQQQAEAG---DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG---DGDALALLAQLKIR-NPQQADYPQARQL 75 (212)
T ss_dssp -CTTHHHHHHHHTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT---CHHHHHHHHHHTTS-STTSCCHHHHHHH
T ss_pred chHHHHHHHHHHCC---CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHc-CCCCCCHHHHHHH
Confidence 35677788877765 77788888888989999999999999998875 66777788888887 6 89999999
Q ss_pred HHHHHhCCCCCCHhhHHHHHHHHhc----CCChhHHHHHHHHHhhcCCCC-ccHHHHHHHHHHHHh----cCcHHHHHHH
Q 021791 142 LGEMVRNGVSPSAETYNCFFKEYRG----RKDANGAMKLYRQMKEDDLCV-PNIHTYNILIGMFMA----LNRMDMVREI 212 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~----~~~~~~a~~~ 212 (307)
|++..+.| +...+..+...|.. .+++++|...|++..+.+. . .+...+..|...|.. .++.++|...
T Consensus 76 ~~~A~~~g---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~-~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~ 151 (212)
T 3rjv_A 76 AEKAVEAG---SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSE-SDAAVDAQMLLGLIYASGVHGPEDDVKASEY 151 (212)
T ss_dssp HHHHHHTT---CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTT-SHHHHHHHHHHHHHHHHTSSSSCCHHHHHHH
T ss_pred HHHHHHCC---CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCC-CcchHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 99988764 66777788888877 8899999999999988752 1 136788888888888 7889999999
Q ss_pred HHHHhhCCCCCCHHhHHHHHHHHHcc-C-----cHHHHHHHHHHHHHcCC
Q 021791 213 WNHVKGSELGLDLDSYTMLIHGLCEK-Q-----KWKEACQYFVEMIEKGL 256 (307)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~li~~~~~~-g-----~~~~a~~~~~~~~~~~~ 256 (307)
++..... ..+...+..+...|... | ++++|...|++..+.|.
T Consensus 152 ~~~A~~~--~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 152 FKGSSSL--SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGF 199 (212)
T ss_dssp HHHHHHT--SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHc--CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 9998876 22555677777777543 2 88999999999888874
No 94
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.24 E-value=2.2e-09 Score=82.72 Aligned_cols=172 Identities=9% Similarity=-0.046 Sum_probs=136.1
Q ss_pred CchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCC---HhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCC-CccHHH
Q 021791 117 PTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS---AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC-VPNIHT 192 (307)
Q Consensus 117 ~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~ 192 (307)
.+...+..+...+.+.|++++|...|+++...... + ...+..+..+|...|++++|...|++......- +.....
T Consensus 13 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 35667778888999999999999999999986433 3 667888999999999999999999999987421 223567
Q ss_pred HHHHHHHHHh--------cCcHHHHHHHHHHHhhCCCCCCHHhH-----------------HHHHHHHHccCcHHHHHHH
Q 021791 193 YNILIGMFMA--------LNRMDMVREIWNHVKGSELGLDLDSY-----------------TMLIHGLCEKQKWKEACQY 247 (307)
Q Consensus 193 ~~~l~~~~~~--------~~~~~~a~~~~~~~~~~~~~~~~~~~-----------------~~li~~~~~~g~~~~a~~~ 247 (307)
+..+..++.. .|++++|...|+.+...... +.... ..+...|...|++++|+..
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~-~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 170 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPN-HELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVT 170 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHH
Confidence 7788888888 99999999999999876322 22333 4567889999999999999
Q ss_pred HHHHHHcCCC--CcHhhHHHHHHHHhhc----------hhHHHHHHHHHHhhhcC
Q 021791 248 FVEMIEKGLL--PQKVTFETLYRGLIQS----------DMLRTWRRLKKKLDEES 290 (307)
Q Consensus 248 ~~~~~~~~~~--p~~~~~~~l~~~~~~~----------g~~~~a~~~~~~~~~~~ 290 (307)
|+++++.... .....+..+..++... |++++|...++++.+..
T Consensus 171 ~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~ 225 (261)
T 3qky_A 171 YEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIF 225 (261)
T ss_dssp HHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHC
Confidence 9999976311 1234677777888766 99999999999987654
No 95
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.23 E-value=2.7e-08 Score=77.82 Aligned_cols=223 Identities=10% Similarity=0.059 Sum_probs=163.6
Q ss_pred HhcCc-hhhHHHHHHHHHhcCCCC-cHHHHHHHHHHHHhhCCCCcchhhHH--HHHHHHHHHHHHHhcCCCCCHHHHHHH
Q 021791 15 CKINR-IDMAERFLGEMIERGVEP-NVVTYNVLLNGVCRRASLHPNERFEK--TIRNAEKVFDEMRVRGIEPDVTSFSIV 90 (307)
Q Consensus 15 ~~~g~-~~~a~~~~~~~~~~~~~p-~~~~~~~ll~~~~~~~~~~~~~~~~~--~~~~a~~~~~~~~~~~~~~~~~~~~~l 90 (307)
.+.|. .++|+++++.++.. .| +...|+.--..+.. .+ +++++++.++.+..... -+..+|+.-
T Consensus 43 ~~~~e~s~~aL~~t~~~L~~--nP~~~taWn~R~~~L~~----------l~~~~~~eeL~~~~~~L~~nP-k~y~aW~~R 109 (306)
T 3dra_A 43 MKAEEYSERALHITELGINE--LASHYTIWIYRFNILKN----------LPNRNLYDELDWCEEIALDNE-KNYQIWNYR 109 (306)
T ss_dssp HHTTCCSHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHT----------CTTSCHHHHHHHHHHHHHHCT-TCCHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHH--CcHHHHHHHHHHHHHHH----------cccccHHHHHHHHHHHHHHCc-ccHHHHHHH
Confidence 34444 46899999998876 34 44567776666666 44 78889999988887743 355566655
Q ss_pred HHHH----Hhc---CCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChH--HHHHHHHHHHhCCCCCCHhhHHHHH
Q 021791 91 LHVY----SRA---HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE--DAEELLGEMVRNGVSPSAETYNCFF 161 (307)
Q Consensus 91 l~~~----~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~--~a~~~~~~~~~~~~~~~~~~~~~l~ 161 (307)
-..+ ... +++++++++++.+.+...+ +..+|+.-...+.+.|.++ ++++.++++.+.++. |...|+.-.
T Consensus 110 ~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk-ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~-N~sAW~~R~ 187 (306)
T 3dra_A 110 QLIIGQIMELNNNDFDPYREFDILEAMLSSDPK-NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLK-NNSAWSHRF 187 (306)
T ss_dssp HHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTT-CHHHHHHHH
T ss_pred HHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCC-CHHHHHHHH
Confidence 5555 444 6788899999998887654 7778887777778888887 888899998887665 777777666
Q ss_pred HHHhcCCC------hhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHH-HHHHHHHHhhCC--CCCCHHhHHHHH
Q 021791 162 KEYRGRKD------ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM-VREIWNHVKGSE--LGLDLDSYTMLI 232 (307)
Q Consensus 162 ~~~~~~~~------~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-a~~~~~~~~~~~--~~~~~~~~~~li 232 (307)
......+. ++++++.+....... +-|...|+.+-..+.+.|+... +..+...+...+ -..+...+..+.
T Consensus 188 ~ll~~l~~~~~~~~~~eEl~~~~~aI~~~--p~n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~la 265 (306)
T 3dra_A 188 FLLFSKKHLATDNTIDEELNYVKDKIVKC--PQNPSTWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTSSFALETLA 265 (306)
T ss_dssp HHHHSSGGGCCHHHHHHHHHHHHHHHHHC--SSCHHHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESCHHHHHHHH
T ss_pred HHHHhccccchhhhHHHHHHHHHHHHHhC--CCCccHHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCCHHHHHHHH
Confidence 66666665 788888888888776 6788888888888878777443 445666655432 123677888888
Q ss_pred HHHHccCcHHHHHHHHHHHHHc
Q 021791 233 HGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 233 ~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
.+|.+.|+.++|.++++.+.+.
T Consensus 266 ~~~~~~~~~~~A~~~~~~l~~~ 287 (306)
T 3dra_A 266 KIYTQQKKYNESRTVYDLLKSK 287 (306)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHccCCHHHHHHHHHHHHhc
Confidence 8888888999999999988764
No 96
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.23 E-value=2.4e-10 Score=100.19 Aligned_cols=184 Identities=14% Similarity=0.030 Sum_probs=145.2
Q ss_pred HhcCCchhHHHHHHHHH--------HcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhc
Q 021791 95 SRAHKPQLSLDKLNFMK--------EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRG 166 (307)
Q Consensus 95 ~~~~~~~~a~~~~~~~~--------~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (307)
...|++++|++.+++.. +.. +.+...+..+...+...|++++|...|++..+.+.. +...|..+..++..
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~-p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~ 479 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDF-SESVELPLMEVRALLDLGDVAKATRKLDDLAERVGW-RWRLVWYRAVAELL 479 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CC-TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhccccccccc-ccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcc-hHHHHHHHHHHHHH
Confidence 67889999999999887 432 336678888889999999999999999998876543 67888888899999
Q ss_pred CCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHH
Q 021791 167 RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ 246 (307)
Q Consensus 167 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~ 246 (307)
.|++++|...|++..+.. +.+...+..+..++.+.|++++ .+.+++..+.+.. +...|..+..++...|++++|+.
T Consensus 480 ~g~~~~A~~~~~~al~l~--P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~ 555 (681)
T 2pzi_A 480 TGDYDSATKHFTEVLDTF--PGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDG-VISAAFGLARARSAEGDRVGAVR 555 (681)
T ss_dssp HTCHHHHHHHHHHHHHHS--TTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCc-hHHHHHHHHHHHHHcCCHHHHHH
Confidence 999999999999998876 5677888899999999999999 9999998876433 67788899999999999999999
Q ss_pred HHHHHHHcCCCCc-HhhHHHHHHHHhhch--------hHHHHHHHHHHh
Q 021791 247 YFVEMIEKGLLPQ-KVTFETLYRGLIQSD--------MLRTWRRLKKKL 286 (307)
Q Consensus 247 ~~~~~~~~~~~p~-~~~~~~l~~~~~~~g--------~~~~a~~~~~~~ 286 (307)
.|++.++. .|+ ...+..+..++...| ++++|.+.+..+
T Consensus 556 ~~~~al~l--~P~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~l~~~ 602 (681)
T 2pzi_A 556 TLDEVPPT--SRHFTTARLTSAVTLLSGRSTSEVTEEQIRDAARRVEAL 602 (681)
T ss_dssp HHHTSCTT--STTHHHHHHHHHHHTC-------CCHHHHHHHHHHHHTS
T ss_pred HHHhhccc--CcccHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHhhC
Confidence 99988754 454 456666777765533 455555555444
No 97
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.22 E-value=1.9e-10 Score=100.80 Aligned_cols=172 Identities=9% Similarity=-0.087 Sum_probs=144.0
Q ss_pred HHHHHHHHHHHHHHH--------hcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcC
Q 021791 62 EKTIRNAEKVFDEMR--------VRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~--------~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~ 133 (307)
.+++++|++.+++.. +. .+.+...+..+..++...|++++|.+.|++..+.... +...|..+..+|...|
T Consensus 404 ~~~~~~A~~~~~~al~~~~~~~~~~-~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g 481 (681)
T 2pzi_A 404 LSQPVQTLDSLRAARHGALDADGVD-FSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGW-RWRLVWYRAVAELLTG 481 (681)
T ss_dssp TCCHHHHHHHHHHHHTC-------C-CTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHhhhhcccccccc-cccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcc-hHHHHHHHHHHHHHcC
Confidence 577899999999988 43 2446678889999999999999999999999887543 7788999999999999
Q ss_pred ChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHH
Q 021791 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIW 213 (307)
Q Consensus 134 ~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~ 213 (307)
++++|...|++..+.... +...+..+..++.+.|++++ ...|++..+.+ +.+...+..+..++.+.|++++|.+.+
T Consensus 482 ~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~--P~~~~a~~~lg~~~~~~g~~~~A~~~~ 557 (681)
T 2pzi_A 482 DYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTN--DGVISAAFGLARARSAEGDRVGAVRTL 557 (681)
T ss_dssp CHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhC--CchHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 999999999999987544 67888899999999999999 99999999876 667889999999999999999999999
Q ss_pred HHHhhCCCCCCHHhHHHHHHHHHccCc
Q 021791 214 NHVKGSELGLDLDSYTMLIHGLCEKQK 240 (307)
Q Consensus 214 ~~~~~~~~~~~~~~~~~li~~~~~~g~ 240 (307)
+++.+.+.. +...+..+..++...++
T Consensus 558 ~~al~l~P~-~~~a~~~~~~~~~~~~~ 583 (681)
T 2pzi_A 558 DEVPPTSRH-FTTARLTSAVTLLSGRS 583 (681)
T ss_dssp HTSCTTSTT-HHHHHHHHHHHTC----
T ss_pred HhhcccCcc-cHHHHHHHHHHHHccCC
Confidence 999876422 45677777777766554
No 98
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.21 E-value=1.5e-09 Score=80.68 Aligned_cols=166 Identities=10% Similarity=0.054 Sum_probs=127.6
Q ss_pred hhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHH----------------HHHHHhcCCChhHHHHHHHHHhhc
Q 021791 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNC----------------FFKEYRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 120 ~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~----------------l~~~~~~~~~~~~a~~~~~~~~~~ 183 (307)
..+......+...|++++|...|++.....+. +...|.. +..+|.+.|++++|...|++..+.
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 5 DEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 34445566788999999999999999886432 4556666 888999999999999999999988
Q ss_pred CCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCc--HHHHHHHHHHHHHcCCCCcHh
Q 021791 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQK--WKEACQYFVEMIEKGLLPQKV 261 (307)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~--~~~a~~~~~~~~~~~~~p~~~ 261 (307)
. +.+...+..+...+...|++++|...|+++...... +..++..+..+|...|+ .+.+...++.... ..|...
T Consensus 84 ~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 158 (208)
T 3urz_A 84 A--PNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEAD-NLAANIFLGNYYYLTAEQEKKKLETDYKKLSS--PTKMQY 158 (208)
T ss_dssp C--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHC---C--CCHHHH
T ss_pred C--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC--CCchhH
Confidence 6 678899999999999999999999999999987533 67888888888766554 4455666665542 233333
Q ss_pred hHHHHHHHHhhchhHHHHHHHHHHhhhcCC
Q 021791 262 TFETLYRGLIQSDMLRTWRRLKKKLDEESI 291 (307)
Q Consensus 262 ~~~~l~~~~~~~g~~~~a~~~~~~~~~~~~ 291 (307)
.+.....++...|++++|...+++..+...
T Consensus 159 a~~~~g~~~~~~~~~~~A~~~~~~al~l~P 188 (208)
T 3urz_A 159 ARYRDGLSKLFTTRYEKARNSLQKVILRFP 188 (208)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 444456667788999999999999876543
No 99
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.21 E-value=5.7e-09 Score=78.50 Aligned_cols=188 Identities=7% Similarity=0.030 Sum_probs=120.5
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCC--chhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCH--hhHH
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICP--TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA--ETYN 158 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~ 158 (307)
+...+..+...+...|++++|...|+.+.+..... ....+..+..+|.+.|++++|...|+++.+..+.... ..+.
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 44556667778888899999999999888763321 1356777888889999999999999988876433111 1344
Q ss_pred HHHHHHhc------------------CCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCC
Q 021791 159 CFFKEYRG------------------RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSE 220 (307)
Q Consensus 159 ~l~~~~~~------------------~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 220 (307)
.+..++.. .|++++|...|+++.+.. +-+...+........ +....
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~--P~~~~a~~a~~~l~~----------~~~~~---- 146 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGY--PNSQYTTDATKRLVF----------LKDRL---- 146 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTC--TTCTTHHHHHHHHHH----------HHHHH----
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHC--cCChhHHHHHHHHHH----------HHHHH----
Confidence 44444443 355666666666666553 222222211111000 00000
Q ss_pred CCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCc----HhhHHHHHHHHhhchhHHHHHHHHHHhhhcCCC
Q 021791 221 LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ----KVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292 (307)
Q Consensus 221 ~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~----~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~~~ 292 (307)
......+...|.+.|++++|+..|+++++.. |+ ...+..+..++.+.|+.++|.+.++.+...+..
T Consensus 147 ----~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~--p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~ 216 (225)
T 2yhc_A 147 ----AKYEYSVAEYYTERGAWVAVVNRVEGMLRDY--PDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSN 216 (225)
T ss_dssp ----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--TTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSC
T ss_pred ----HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHC--cCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCC
Confidence 0011345667888999999999999998762 33 246778888999999999999999988766543
No 100
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.20 E-value=8.2e-10 Score=86.39 Aligned_cols=163 Identities=11% Similarity=-0.032 Sum_probs=81.3
Q ss_pred chhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHH-HHHH
Q 021791 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHT-YNIL 196 (307)
Q Consensus 118 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~l 196 (307)
+...+..+...+...|++++|...|++.....+. +...+..+...+...|++++|...++++.... |+... ....
T Consensus 116 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~---p~~~~~~~~~ 191 (287)
T 3qou_A 116 EEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQ-NGEIGLLLAETLIALNRSEDAEAVLXTIPLQD---QDTRYQGLVA 191 (287)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGG---CSHHHHHHHH
T ss_pred chhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCc-chhHHHHHHHHHHHCCCHHHHHHHHHhCchhh---cchHHHHHHH
Confidence 3344445555555555555555555555554322 44455555555555555555555555554442 22221 1122
Q ss_pred HHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCC-CcHhhHHHHHHHHhhchh
Q 021791 197 IGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLL-PQKVTFETLYRGLIQSDM 275 (307)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~-p~~~~~~~l~~~~~~~g~ 275 (307)
...+...++.+.|...+++...... .+...+..+...+...|++++|...|.++++..-. .+...+..+...+...|+
T Consensus 192 ~~~l~~~~~~~~a~~~l~~al~~~P-~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~ 270 (287)
T 3qou_A 192 QIELLXQAADTPEIQQLQQQVAENP-EDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGT 270 (287)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCT
T ss_pred HHHHHhhcccCccHHHHHHHHhcCC-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCC
Confidence 2223444455555555555554422 24555555555555566666666666655554211 113345555555555555
Q ss_pred HHHHHHHHHH
Q 021791 276 LRTWRRLKKK 285 (307)
Q Consensus 276 ~~~a~~~~~~ 285 (307)
.++|...+++
T Consensus 271 ~~~a~~~~r~ 280 (287)
T 3qou_A 271 GDALASXYRR 280 (287)
T ss_dssp TCHHHHHHHH
T ss_pred CCcHHHHHHH
Confidence 5555555544
No 101
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.19 E-value=1.2e-10 Score=81.79 Aligned_cols=138 Identities=7% Similarity=-0.100 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHH
Q 021791 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~ 141 (307)
.+++++|+..+....... +-+...+..+...|.+.|++++|++.|++..+.... +..+|..+..+|.+.|++++|...
T Consensus 10 ~~~~e~ai~~~~~a~~~~-p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~ 87 (150)
T 4ga2_A 10 KADVERYIASVQGSTPSP-RQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVEC 87 (150)
T ss_dssp HHHHHHHHHHHHHHSCSH-HHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cChHHHHHHHHHHhcccC-cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHH
Confidence 455666666665554331 112334445555666666666666666666555332 555566666666666666666666
Q ss_pred HHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHH-HHHHhhcCCCCccHHHHHHHHHHHHhcC
Q 021791 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL-YRQMKEDDLCVPNIHTYNILIGMFMALN 204 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 204 (307)
|++..+..+. +..++..+...|.+.|+.+++... +++..+.. |.+..+|......+...|
T Consensus 88 ~~~al~~~p~-~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~--P~~~~~~~l~~~ll~~~G 148 (150)
T 4ga2_A 88 YRRSVELNPT-QKDLVLKIAELLCKNDVTDGRAKYWVERAAKLF--PGSPAVYKLKEQLLDCEG 148 (150)
T ss_dssp HHHHHHHCTT-CHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHS--TTCHHHHHHHHHHHHTCC
T ss_pred HHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhC--cCCHHHHHHHHHHHHHhC
Confidence 6666554332 455555555566666665544433 34444443 344455554444444443
No 102
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.18 E-value=1.3e-09 Score=93.71 Aligned_cols=164 Identities=8% Similarity=-0.020 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHH
Q 021791 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~ 141 (307)
.+++++|.+.+++..+.. +.+...+..+...+...|++++|.+.+++..+.... +...+..+...|...|++++|...
T Consensus 2 ~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~ 79 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHR-PQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVL 79 (568)
T ss_dssp --------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHH
Confidence 578899999999887763 336788889999999999999999999999887533 677888899999999999999999
Q ss_pred HHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhc---CcHHHHHHHHHHHhh
Q 021791 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL---NRMDMVREIWNHVKG 218 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~a~~~~~~~~~ 218 (307)
+++..+.... +...+..+...+...|++++|...+++..+.. +.+...+..+...+... |+.++|.+.+++..+
T Consensus 80 ~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~ 156 (568)
T 2vsy_A 80 LQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLL--PEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVA 156 (568)
T ss_dssp HHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHH
T ss_pred HHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHh
Confidence 9998886543 67788889999999999999999999988875 56678888899999999 999999999999887
Q ss_pred CCCCCCHHhHHHH
Q 021791 219 SELGLDLDSYTML 231 (307)
Q Consensus 219 ~~~~~~~~~~~~l 231 (307)
.+.. +...|..+
T Consensus 157 ~~p~-~~~~~~~l 168 (568)
T 2vsy_A 157 QGVG-AVEPFAFL 168 (568)
T ss_dssp HTCC-CSCHHHHT
T ss_pred cCCc-ccChHHHh
Confidence 6433 33344433
No 103
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.18 E-value=4.9e-10 Score=80.92 Aligned_cols=160 Identities=12% Similarity=0.060 Sum_probs=78.9
Q ss_pred HHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHH-Hhc
Q 021791 88 SIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE-YRG 166 (307)
Q Consensus 88 ~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~-~~~ 166 (307)
..+...+...|++++|...++...+.... +...+..+...+...|++++|...+++...... +...+...... +..
T Consensus 10 ~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~ 86 (176)
T 2r5s_A 10 LKQVSELLQQGEHAQALNVIQTLSDELQS-RGDVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQ 86 (176)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSCHHHHT-SHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHh
Confidence 34444555566666666666555444221 445555566666666666666666665544322 22222211111 111
Q ss_pred CCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCC-CHHhHHHHHHHHHccCcHHHHH
Q 021791 167 RKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-DLDSYTMLIHGLCEKQKWKEAC 245 (307)
Q Consensus 167 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~li~~~~~~g~~~~a~ 245 (307)
.+...++...+++..... +.+...+..+...+...|++++|...++.+......+ +...+..+..++...|+.++|.
T Consensus 87 ~~~~~~a~~~~~~al~~~--P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~ 164 (176)
T 2r5s_A 87 QAAESPELKRLEQELAAN--PDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIA 164 (176)
T ss_dssp HHTSCHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHH
T ss_pred hcccchHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHH
Confidence 122223455555555443 3345555555555555666666666655555543221 2334555555555555555555
Q ss_pred HHHHHHH
Q 021791 246 QYFVEMI 252 (307)
Q Consensus 246 ~~~~~~~ 252 (307)
..|++.+
T Consensus 165 ~~y~~al 171 (176)
T 2r5s_A 165 SKYRRQL 171 (176)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 104
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.17 E-value=1.8e-09 Score=84.42 Aligned_cols=168 Identities=10% Similarity=-0.033 Sum_probs=139.5
Q ss_pred CCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHH-H
Q 021791 81 EPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN-C 159 (307)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~ 159 (307)
+.+...+..+...+...|++++|...|++..+.... +...+..+...+...|++++|...++++.... |+..... .
T Consensus 114 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~--p~~~~~~~~ 190 (287)
T 3qou_A 114 PREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQ-NGEIGLLLAETLIALNRSEDAEAVLXTIPLQD--QDTRYQGLV 190 (287)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGG--CSHHHHHHH
T ss_pred CCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCc-chhHHHHHHHHHHHCCCHHHHHHHHHhCchhh--cchHHHHHH
Confidence 556677888889999999999999999999887543 77889999999999999999999999987754 4443332 2
Q ss_pred HHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCC-CHHhHHHHHHHHHcc
Q 021791 160 FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-DLDSYTMLIHGLCEK 238 (307)
Q Consensus 160 l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~li~~~~~~ 238 (307)
....+...++.++|...+++..... +.+...+..+...+...|++++|...+.++....... +...+..+...+...
T Consensus 191 ~~~~l~~~~~~~~a~~~l~~al~~~--P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~ 268 (287)
T 3qou_A 191 AQIELLXQAADTPEIQQLQQQVAEN--PEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAAL 268 (287)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccCccHHHHHHHHhcC--CccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHc
Confidence 3334667788888999999998876 6788999999999999999999999999999864321 266899999999999
Q ss_pred CcHHHHHHHHHHHHH
Q 021791 239 QKWKEACQYFVEMIE 253 (307)
Q Consensus 239 g~~~~a~~~~~~~~~ 253 (307)
|+.++|...+++.+.
T Consensus 269 g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 269 GTGDALASXYRRQLY 283 (287)
T ss_dssp CTTCHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHH
Confidence 999999999987654
No 105
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.17 E-value=8.6e-09 Score=77.49 Aligned_cols=173 Identities=9% Similarity=-0.051 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHhcCCC-C-CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCch--hhHHHHHHHHHh------
Q 021791 62 EKTIRNAEKVFDEMRVRGIE-P-DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV--ATYTSVVKCLCS------ 131 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~~-~-~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~ll~~~~~------ 131 (307)
.|++++|+..|+++.+.... | ....+..+..++.+.|++++|+..|+.+.+....... ..+..+..++..
T Consensus 17 ~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~ 96 (225)
T 2yhc_A 17 DGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSAL 96 (225)
T ss_dssp HTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC---
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhh
Confidence 67899999999999886322 1 2357888899999999999999999999887433111 245555555554
Q ss_pred ------------cCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHH
Q 021791 132 ------------CGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199 (307)
Q Consensus 132 ------------~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~ 199 (307)
.|++++|...|+++.+..+. +...+...... ..+...+ ......+...
T Consensus 97 ~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~-~~~a~~a~~~l----------~~~~~~~---------~~~~~~~a~~ 156 (225)
T 2yhc_A 97 QGFFGVDRSDRDPQQARAAFSDFSKLVRGYPN-SQYTTDATKRL----------VFLKDRL---------AKYEYSVAEY 156 (225)
T ss_dssp -----------CCHHHHHHHHHHHHHHTTCTT-CTTHHHHHHHH----------HHHHHHH---------HHHHHHHHHH
T ss_pred hhhhccchhhcCcHHHHHHHHHHHHHHHHCcC-ChhHHHHHHHH----------HHHHHHH---------HHHHHHHHHH
Confidence 57899999999999986432 22233221110 0011111 1122345677
Q ss_pred HHhcCcHHHHHHHHHHHhhCCCCCC--HHhHHHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 200 FMALNRMDMVREIWNHVKGSELGLD--LDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
+.+.|++++|...++.+.+...... ...+..+..++.+.|++++|...++.+...
T Consensus 157 ~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~ 213 (225)
T 2yhc_A 157 YTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAAN 213 (225)
T ss_dssp HHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHC
T ss_pred HHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhh
Confidence 8888999999999988887632211 246777888889999999999999888776
No 106
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.16 E-value=1.8e-08 Score=75.00 Aligned_cols=178 Identities=11% Similarity=-0.021 Sum_probs=144.9
Q ss_pred hhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCC----ChhHHHHH
Q 021791 101 QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK----DANGAMKL 176 (307)
Q Consensus 101 ~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~a~~~ 176 (307)
.+|++.|++..+.| +...+..+...|...+++++|...|++..+.| +...+..+...|.. + ++++|...
T Consensus 3 ~eA~~~~~~aa~~g---~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g---~~~a~~~lg~~y~~-~g~~~~~~~A~~~ 75 (212)
T 3rjv_A 3 TEPGSQYQQQAEAG---DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG---DGDALALLAQLKIR-NPQQADYPQARQL 75 (212)
T ss_dssp -CTTHHHHHHHHTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT---CHHHHHHHHHHTTS-STTSCCHHHHHHH
T ss_pred chHHHHHHHHHHCC---CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHc-CCCCCCHHHHHHH
Confidence 35778888888775 77888899999999999999999999998865 66788888888887 6 89999999
Q ss_pred HHHHhhcCCCCccHHHHHHHHHHHHh----cCcHHHHHHHHHHHhhCCCC-CCHHhHHHHHHHHHc----cCcHHHHHHH
Q 021791 177 YRQMKEDDLCVPNIHTYNILIGMFMA----LNRMDMVREIWNHVKGSELG-LDLDSYTMLIHGLCE----KQKWKEACQY 247 (307)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~a~~~~~~~~~~~~~-~~~~~~~~li~~~~~----~g~~~~a~~~ 247 (307)
|++..+.+ +...+..|...|.. .+++++|.+.++...+.+.. .+...+..|...|.. .+++++|...
T Consensus 76 ~~~A~~~g----~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~ 151 (212)
T 3rjv_A 76 AEKAVEAG----SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEY 151 (212)
T ss_dssp HHHHHHTT----CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHH
T ss_pred HHHHHHCC----CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 99997754 56778888888877 88999999999999987521 026788888888888 8899999999
Q ss_pred HHHHHHcCCCCcHhhHHHHHHHHhhc-h-----hHHHHHHHHHHhhhcCC
Q 021791 248 FVEMIEKGLLPQKVTFETLYRGLIQS-D-----MLRTWRRLKKKLDEESI 291 (307)
Q Consensus 248 ~~~~~~~~~~p~~~~~~~l~~~~~~~-g-----~~~~a~~~~~~~~~~~~ 291 (307)
|++..+. ..+...+..|...|... | +.++|..++++..+.|.
T Consensus 152 ~~~A~~~--~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 152 FKGSSSL--SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGF 199 (212)
T ss_dssp HHHHHHT--SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHc--CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 9999887 23444666677777543 3 89999999999877764
No 107
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.15 E-value=1e-09 Score=76.95 Aligned_cols=146 Identities=8% Similarity=-0.041 Sum_probs=117.3
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCC
Q 021791 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD 169 (307)
Q Consensus 90 ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 169 (307)
|...+...|++++|+..++....... -+...+..+...|.+.|++++|.+.|++..+..+. +..+|..+..+|...|+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p-~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~ 80 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPR-QKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEEN 80 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHH-HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCc-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCc
Confidence 34455667889999999988766532 24556778999999999999999999999987654 78899999999999999
Q ss_pred hhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHH-HHHHhhCCCCCCHHhHHHHHHHHHccCc
Q 021791 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI-WNHVKGSELGLDLDSYTMLIHGLCEKQK 240 (307)
Q Consensus 170 ~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~-~~~~~~~~~~~~~~~~~~li~~~~~~g~ 240 (307)
+++|...|++..+.. +.+..++..+...+.+.|+.++|.+. ++...+.... +..+|......+...|+
T Consensus 81 ~~~A~~~~~~al~~~--p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~-~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 81 TDKAVECYRRSVELN--PTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPG-SPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTCCC
T ss_pred hHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHhCc
Confidence 999999999999886 56788999999999999999876665 5777776432 67778877777777764
No 108
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.14 E-value=6.5e-09 Score=82.11 Aligned_cols=216 Identities=13% Similarity=0.068 Sum_probs=153.8
Q ss_pred HHHHHHHHHHHHHHHhc------CCCCCH----HHHHHHHHHHHhcCCchhHHHHHHHHHHc----CCC-CchhhHHHHH
Q 021791 62 EKTIRNAEKVFDEMRVR------GIEPDV----TSFSIVLHVYSRAHKPQLSLDKLNFMKEK----GIC-PTVATYTSVV 126 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~------~~~~~~----~~~~~ll~~~~~~~~~~~a~~~~~~~~~~----~~~-~~~~~~~~ll 126 (307)
.+++++|.+++++..+. +..++. ..|......|...|++++|...|.+..+. +-. .-..+|+.+.
T Consensus 4 ~~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg 83 (307)
T 2ifu_A 4 AQKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAG 83 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 67888888888876542 112342 36777788899999999999999887654 211 1145788899
Q ss_pred HHHHhcCChHHHHHHHHHHHhCC--C-CC--CHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCC--Cc--cHHHHHHHH
Q 021791 127 KCLCSCGRIEDAEELLGEMVRNG--V-SP--SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC--VP--NIHTYNILI 197 (307)
Q Consensus 127 ~~~~~~~~~~~a~~~~~~~~~~~--~-~~--~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~--~~--~~~~~~~l~ 197 (307)
..|...|++++|...|++..... . .+ ...++..+...|.. |++++|+..+++....... .+ ...++..+.
T Consensus 84 ~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg 162 (307)
T 2ifu_A 84 MMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKAS 162 (307)
T ss_dssp HHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHH
Confidence 99999999999999999876531 1 11 13577788888988 9999999999988754210 11 146788899
Q ss_pred HHHHhcCcHHHHHHHHHHHhhC----CCCCC-HHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcH------hhHHHH
Q 021791 198 GMFMALNRMDMVREIWNHVKGS----ELGLD-LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK------VTFETL 266 (307)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~----~~~~~-~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~------~~~~~l 266 (307)
..+...|++++|+..+++.... +..++ ...+..+..++...|++++|...|++.+ . .|+. .....+
T Consensus 163 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~--~p~~~~~~e~~~l~~l 239 (307)
T 2ifu_A 163 RLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-S--IPGFSGSEDCAALEDL 239 (307)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-T--STTSTTSHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-C--CCCCCCCHHHHHHHHH
Confidence 9999999999999999988763 11111 2256667777888899999999999998 4 2321 234445
Q ss_pred HHHHhhchhHHHHHHH
Q 021791 267 YRGLIQSDMLRTWRRL 282 (307)
Q Consensus 267 ~~~~~~~g~~~~a~~~ 282 (307)
+.++ ..|+.+.+.++
T Consensus 240 ~~~~-~~~d~~~~~~~ 254 (307)
T 2ifu_A 240 LQAY-DEQDEEQLLRV 254 (307)
T ss_dssp HHHH-HTTCHHHHHHH
T ss_pred HHHH-HhcCHHHHHHH
Confidence 5555 56666666653
No 109
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.14 E-value=2.6e-09 Score=91.90 Aligned_cols=154 Identities=7% Similarity=-0.057 Sum_probs=121.0
Q ss_pred cCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHH
Q 021791 97 AHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKL 176 (307)
Q Consensus 97 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~ 176 (307)
.|++++|.+.+++..+.... +...+..+...+...|++++|...+++..+.... +...+..+...|...|++++|...
T Consensus 2 ~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~ 79 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQ-DFVAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVL 79 (568)
T ss_dssp -------------------C-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHH
Confidence 47889999999998876433 6788999999999999999999999999987543 678899999999999999999999
Q ss_pred HHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHcc---CcHHHHHHHHHHHHH
Q 021791 177 YRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK---QKWKEACQYFVEMIE 253 (307)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~---g~~~~a~~~~~~~~~ 253 (307)
+++..+.. +.+...+..+..++...|++++|.+.+++..+... .+...+..+..++... |++++|...+++.++
T Consensus 80 ~~~al~~~--p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~ 156 (568)
T 2vsy_A 80 LQQASDAA--PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLP-EEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVA 156 (568)
T ss_dssp HHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHH
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHh
Confidence 99999876 56788999999999999999999999999988743 3678899999999999 999999999999998
Q ss_pred cC
Q 021791 254 KG 255 (307)
Q Consensus 254 ~~ 255 (307)
.+
T Consensus 157 ~~ 158 (568)
T 2vsy_A 157 QG 158 (568)
T ss_dssp HT
T ss_pred cC
Confidence 74
No 110
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.13 E-value=9.7e-10 Score=79.34 Aligned_cols=163 Identities=9% Similarity=-0.046 Sum_probs=125.8
Q ss_pred hhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHH
Q 021791 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199 (307)
Q Consensus 120 ~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~ 199 (307)
..+......+...|++++|...|++..+..+. +...+..+...+...|++++|...++...... + +...+..+...
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~--p-~~~~~~~~~~~ 82 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDELQS-RGDVKLAKADCLLETKQFELAQELLATIPLEY--Q-DNSYKSLIAKL 82 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHT-SHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGG--C-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHhhhcc--C-ChHHHHHHHHH
Confidence 34566778889999999999999998775433 67889999999999999999999999988764 3 44433332222
Q ss_pred -HHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCC-cHhhHHHHHHHHhhchhHH
Q 021791 200 -FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP-QKVTFETLYRGLIQSDMLR 277 (307)
Q Consensus 200 -~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p-~~~~~~~l~~~~~~~g~~~ 277 (307)
+...+....|...++........ +...+..+..++...|++++|...|+++++....+ +...+..+...+...|+.+
T Consensus 83 ~~~~~~~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 161 (176)
T 2r5s_A 83 ELHQQAAESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGN 161 (176)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSC
T ss_pred HHHhhcccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCC
Confidence 12222334578888888876432 68889999999999999999999999999764322 2457888999999999999
Q ss_pred HHHHHHHHhh
Q 021791 278 TWRRLKKKLD 287 (307)
Q Consensus 278 ~a~~~~~~~~ 287 (307)
+|...+++..
T Consensus 162 ~A~~~y~~al 171 (176)
T 2r5s_A 162 AIASKYRRQL 171 (176)
T ss_dssp HHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 9999988764
No 111
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.12 E-value=4.3e-08 Score=76.70 Aligned_cols=217 Identities=8% Similarity=-0.027 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC--CchhHHHHHHHHHHcCCCCchhhHHHHHHHH----Hhc---CChH
Q 021791 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH--KPQLSLDKLNFMKEKGICPTVATYTSVVKCL----CSC---GRIE 136 (307)
Q Consensus 66 ~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~--~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~----~~~---~~~~ 136 (307)
++|++.++.++... +-+...|+.--.++...| +++++++.++.+.....+ +..+|+.--..+ ... ++++
T Consensus 50 ~~aL~~t~~~L~~n-P~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~~~~~~ 127 (306)
T 3dra_A 50 ERALHITELGINEL-ASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNNDFDPY 127 (306)
T ss_dssp HHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTTCCCTH
T ss_pred HHHHHHHHHHHHHC-cHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccccCCHH
Confidence 68999999998874 336667888888888888 999999999999988654 666666555554 445 7899
Q ss_pred HHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChh--HHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCc------HHH
Q 021791 137 DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDAN--GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR------MDM 208 (307)
Q Consensus 137 ~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~ 208 (307)
+++.+++.+.+...+ +..+|+.-...+.+.+.++ ++++.++.+.+.+ +-|...|+.-...+...+. +++
T Consensus 128 ~EL~~~~~~l~~~pk-ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d--~~N~sAW~~R~~ll~~l~~~~~~~~~~e 204 (306)
T 3dra_A 128 REFDILEAMLSSDPK-NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTD--LKNNSAWSHRFFLLFSKKHLATDNTIDE 204 (306)
T ss_dssp HHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHSSGGGCCHHHHHH
T ss_pred HHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHhccccchhhhHHH
Confidence 999999999988665 8888888877788888888 9999999999887 6788899888777777776 899
Q ss_pred HHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHH-HHHHHHHHHHcC--CCCcHhhHHHHHHHHhhchhHHHHHHHHHH
Q 021791 209 VREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKE-ACQYFVEMIEKG--LLPQKVTFETLYRGLIQSDMLRTWRRLKKK 285 (307)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~-a~~~~~~~~~~~--~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~ 285 (307)
+++.++.+....+. |...|+..-..+.+.|+... +..+..++.+.+ -..++..+..+...+.+.|+.++|.++++.
T Consensus 205 El~~~~~aI~~~p~-n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~la~~~~~~~~~~~A~~~~~~ 283 (306)
T 3dra_A 205 ELNYVKDKIVKCPQ-NPSTWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTSSFALETLAKIYTQQKKYNESRTVYDL 283 (306)
T ss_dssp HHHHHHHHHHHCSS-CHHHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC-CccHHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHH
Confidence 99999998887644 88889888888888877444 555666665432 134667888899999999999999999999
Q ss_pred hhh
Q 021791 286 LDE 288 (307)
Q Consensus 286 ~~~ 288 (307)
+.+
T Consensus 284 l~~ 286 (306)
T 3dra_A 284 LKS 286 (306)
T ss_dssp HHH
T ss_pred HHh
Confidence 875
No 112
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=99.07 E-value=6.4e-08 Score=84.03 Aligned_cols=234 Identities=10% Similarity=-0.025 Sum_probs=166.8
Q ss_pred hhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHH-HHHHHHHhcCCCCCHHHHHHHHHHHHhcCC
Q 021791 21 DMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAE-KVFDEMRVRGIEPDVTSFSIVLHVYSRAHK 99 (307)
Q Consensus 21 ~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 99 (307)
+++..+|++.+.. .+-....|.....-+.. .++.++|. ++|++.... .+.+...|...+...-+.|+
T Consensus 326 ~Rv~~~Ye~aL~~-~p~~~~lW~~ya~~~~~----------~~~~~~a~r~il~rAi~~-~P~s~~Lwl~~a~~ee~~~~ 393 (679)
T 4e6h_A 326 ARMTYVYMQAAQH-VCFAPEIWFNMANYQGE----------KNTDSTVITKYLKLGQQC-IPNSAVLAFSLSEQYELNTK 393 (679)
T ss_dssp HHHHHHHHHHHHH-TTTCHHHHHHHHHHHHH----------HSCCTTHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHh----------cCcHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHhCC
Confidence 4456778888766 33366777777777766 45556775 888888765 45567778888888889999
Q ss_pred chhHHHHHHHHHHcCC---------CC------------chhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHH
Q 021791 100 PQLSLDKLNFMKEKGI---------CP------------TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158 (307)
Q Consensus 100 ~~~a~~~~~~~~~~~~---------~~------------~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 158 (307)
++.|.++|+.+..... .| ...+|...+....+.|..+.|..+|.+..+.........|.
T Consensus 394 ~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi 473 (679)
T 4e6h_A 394 IPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYL 473 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHH
Confidence 9999999988876410 12 23467778888888899999999999988751112334444
Q ss_pred HHHHHHhcC-CChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCC--CHHhHHHHHHHH
Q 021791 159 CFFKEYRGR-KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL--DLDSYTMLIHGL 235 (307)
Q Consensus 159 ~l~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~li~~~ 235 (307)
..+..-.+. ++.+.|..+|+...+.. +.+...+...+......|+.+.|+.+|+........+ ....|...+..-
T Consensus 474 ~~A~lE~~~~~d~e~Ar~ife~~Lk~~--p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE 551 (679)
T 4e6h_A 474 ENAYIEYHISKDTKTACKVLELGLKYF--ATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFE 551 (679)
T ss_dssp HHHHHHHTTTSCCHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHC--CCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 333333343 45899999999988873 4566667788888888899999999999988764322 345688888888
Q ss_pred HccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHH
Q 021791 236 CEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270 (307)
Q Consensus 236 ~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~ 270 (307)
.+.|+.+.+..+.+++.+. .|+......+++-|
T Consensus 552 ~~~G~~~~~~~v~~R~~~~--~P~~~~~~~f~~ry 584 (679)
T 4e6h_A 552 SKVGSLNSVRTLEKRFFEK--FPEVNKLEEFTNKY 584 (679)
T ss_dssp HHTCCSHHHHHHHHHHHHH--STTCCHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHHHHHh--CCCCcHHHHHHHHh
Confidence 8899999999999999876 35555555555444
No 113
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.06 E-value=8.2e-08 Score=75.23 Aligned_cols=162 Identities=10% Similarity=-0.061 Sum_probs=76.0
Q ss_pred HHHHHhcCCchhHHHHHHHHHHcCC-CCch----hhHHHHHHHHHhcCChHHHHHHHHHHHhCCCC-CC----HhhHHHH
Q 021791 91 LHVYSRAHKPQLSLDKLNFMKEKGI-CPTV----ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS-PS----AETYNCF 160 (307)
Q Consensus 91 l~~~~~~~~~~~a~~~~~~~~~~~~-~~~~----~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~-~~----~~~~~~l 160 (307)
+..+...|++++|.++++...+... .|+. ..+..+...+...+++++|...+++....... ++ ..+++.+
T Consensus 82 i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~l 161 (293)
T 3u3w_A 82 VIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAI 161 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence 4455556666666666666554321 1111 12223444444555666666666655542211 11 1245555
Q ss_pred HHHHhcCCChhHHHHHHHHHhhc-----CCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhC----CCCCC-HHhHHH
Q 021791 161 FKEYRGRKDANGAMKLYRQMKED-----DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS----ELGLD-LDSYTM 230 (307)
Q Consensus 161 ~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~----~~~~~-~~~~~~ 230 (307)
...|...|++++|...+++..+. +..+....++..+...|...|++++|.+.++..... +..+. ..+|..
T Consensus 162 g~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 241 (293)
T 3u3w_A 162 ANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQ 241 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 55566666666666665555421 000111224555555555555555555555544321 11111 334555
Q ss_pred HHHHHHccC-cHHHHHHHHHHHH
Q 021791 231 LIHGLCEKQ-KWKEACQYFVEMI 252 (307)
Q Consensus 231 li~~~~~~g-~~~~a~~~~~~~~ 252 (307)
+..+|.+.| .+++|...+++.+
T Consensus 242 lg~~~~~~g~~~~~A~~~~~~Al 264 (293)
T 3u3w_A 242 RGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCcHHHHHHHHHHHH
Confidence 555555555 2455555555543
No 114
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.05 E-value=6.5e-07 Score=70.91 Aligned_cols=231 Identities=9% Similarity=0.051 Sum_probs=160.4
Q ss_pred HHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHH-HHHHHHHHHHHHHhcCCCCCHHH
Q 021791 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEK-TIRNAEKVFDEMRVRGIEPDVTS 86 (307)
Q Consensus 8 ~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~ 86 (307)
+.+-......+..++|+++++.++..+.. +...|+.--..+.. .+ .++++++.++.+.... +-+..+
T Consensus 58 ~~~r~~~~~~e~se~AL~lt~~~L~~nP~-~ytaWn~R~~iL~~----------l~~~l~eEL~~~~~~L~~n-PKny~a 125 (349)
T 3q7a_A 58 DYFRAIAAKEEKSERALELTEIIVRMNPA-HYTVWQYRFSLLTS----------LNKSLEDELRLMNEFAVQN-LKSYQV 125 (349)
T ss_dssp HHHHHHHHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH----------TTCCHHHHHHHHHHHHHTT-CCCHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHhCch-hHHHHHHHHHHHHH----------hhhhHHHHHHHHHHHHHhC-CCcHHH
Confidence 33333344445567899999999887322 45567777666666 44 4889999999998875 347778
Q ss_pred HHHHHHHHHhc-C-CchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChH--------HHHHHHHHHHhCCCCCCHhh
Q 021791 87 FSIVLHVYSRA-H-KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIE--------DAEELLGEMVRNGVSPSAET 156 (307)
Q Consensus 87 ~~~ll~~~~~~-~-~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~--------~a~~~~~~~~~~~~~~~~~~ 156 (307)
|+.-...+... + ++++++++++.+.+.... +..+|+.-...+.+.|.++ ++++.++++.+..+. |...
T Consensus 126 W~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpk-Ny~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~-N~SA 203 (349)
T 3q7a_A 126 WHHRLLLLDRISPQDPVSEIEYIHGSLLPDPK-NYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGR-NNSA 203 (349)
T ss_dssp HHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTT-CHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTT-CHHH
T ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCC-CHHH
Confidence 88777777776 6 888999999999887654 7777776666666655555 888888888887665 7788
Q ss_pred HHHHHHHHhcCCC-------hhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcH--------------------HHH
Q 021791 157 YNCFFKEYRGRKD-------ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM--------------------DMV 209 (307)
Q Consensus 157 ~~~l~~~~~~~~~-------~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--------------------~~a 209 (307)
|+.....+.+.+. ++++++.+.+..... +-|...|+-+-..+.+.|.. ...
T Consensus 204 W~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~--P~n~SaW~Ylr~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (349)
T 3q7a_A 204 WGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLI--PHNVSAWNYLRGFLKHFSLPLVPILPAILPYTASKLNPDIETV 281 (349)
T ss_dssp HHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCCSGGGHHHHGGGTC----------
T ss_pred HHHHHHHHHhccccccchHHHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHhcCCCcccccccccccccccccccchhH
Confidence 8887777777775 578888888887775 67788887776666666543 223
Q ss_pred HHHHHHHhhCC-----CCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 210 REIWNHVKGSE-----LGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 210 ~~~~~~~~~~~-----~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
......+...+ -.++...+..++..|...|+.++|.++++.+.+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~s~~al~~l~d~~~~~~~~~~a~~~~~~l~~~ 331 (349)
T 3q7a_A 282 EAFGFPMPSDPLPEDTPLPVPLALEYLADSFIEQNRVDDAAKVFEKLSSE 331 (349)
T ss_dssp ----CCCCC-CCCSSCCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcccccccCCCcHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Confidence 33333333221 1246777788888888888888888888887654
No 115
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.03 E-value=4.2e-08 Score=72.86 Aligned_cols=92 Identities=11% Similarity=-0.026 Sum_probs=48.1
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhc
Q 021791 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRG 166 (307)
Q Consensus 87 ~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (307)
+..+...+...|++++|...|++.. .|+...+..+...|...|++++|...+++...... .+...+..+..++..
T Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~a~----~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~lg~~~~~ 83 (213)
T 1hh8_A 9 LWNEGVLAADKKDWKGALDAFSAVQ----DPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDK-HLAVAYFQRGMLYYQ 83 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSS----SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHc----CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-cchHHHHHHHHHHHH
Confidence 3344445555555555555555442 33455555555555555555555555555554432 244455555555555
Q ss_pred CCChhHHHHHHHHHhhc
Q 021791 167 RKDANGAMKLYRQMKED 183 (307)
Q Consensus 167 ~~~~~~a~~~~~~~~~~ 183 (307)
.|++++|...|++..+.
T Consensus 84 ~~~~~~A~~~~~~al~~ 100 (213)
T 1hh8_A 84 TEKYDLAIKDLKEALIQ 100 (213)
T ss_dssp TTCHHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHHh
Confidence 55555555555555544
No 116
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.02 E-value=4e-08 Score=72.96 Aligned_cols=127 Identities=12% Similarity=0.032 Sum_probs=74.6
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHH
Q 021791 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFM 201 (307)
Q Consensus 122 ~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 201 (307)
+..+...+...|++++|...|++.. .|+...+..+...+...|++++|...+++..... +.+...+..+..++.
T Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~a~----~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~lg~~~~ 82 (213)
T 1hh8_A 9 LWNEGVLAADKKDWKGALDAFSAVQ----DPHSRICFNIGCMYTILKNMTEAEKAFTRSINRD--KHLAVAYFQRGMLYY 82 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSS----SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHc----CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--ccchHHHHHHHHHHH
Confidence 3444555566666666666665552 3455566666666666666666666666666554 445556666666666
Q ss_pred hcCcHHHHHHHHHHHhhCCCC--------------C-CHHhHHHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 202 ALNRMDMVREIWNHVKGSELG--------------L-DLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 202 ~~~~~~~a~~~~~~~~~~~~~--------------~-~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
..|++++|.+.++........ | ....+..+..+|...|++++|...|++..+.
T Consensus 83 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 150 (213)
T 1hh8_A 83 QTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSM 150 (213)
T ss_dssp HTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Confidence 666666666666666553211 0 1145556666666666666666666666644
No 117
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.02 E-value=1.9e-08 Score=79.48 Aligned_cols=219 Identities=9% Similarity=0.004 Sum_probs=149.6
Q ss_pred hcCchhhHHHHHHHHHhc------CCCCcH----HHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhc----CCC
Q 021791 16 KINRIDMAERFLGEMIER------GVEPNV----VTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR----GIE 81 (307)
Q Consensus 16 ~~g~~~~a~~~~~~~~~~------~~~p~~----~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~~ 81 (307)
..|++++|.+++++..+. +..++. ..|......+.. .+++++|...|.+..+. +-.
T Consensus 3 ~~~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a~~~~~~----------~g~~~~A~~~~~~al~~~~~~~~~ 72 (307)
T 2ifu_A 3 AAQKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKAAVAFKN----------AKQLEQAKDAYLQEAEAHANNRSL 72 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred ccchHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHHHHHcCCH
Confidence 357788888888877653 112332 245555566666 67778888888776543 111
Q ss_pred C-CHHHHHHHHHHHHhcCCchhHHHHHHHHHHc----CCCC-chhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCC---
Q 021791 82 P-DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK----GICP-TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSP--- 152 (307)
Q Consensus 82 ~-~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~----~~~~-~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~--- 152 (307)
+ -..+|+.+...|...|++++|...|++..+. |-.. ...++..+...|.. |++++|+..|++........
T Consensus 73 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~ 151 (307)
T 2ifu_A 73 FHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERL 151 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCCh
Confidence 1 1457888999999999999999999887654 2111 24577888889988 99999999999887532111
Q ss_pred --CHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCC---CCcc-HHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCC-CH
Q 021791 153 --SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL---CVPN-IHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-DL 225 (307)
Q Consensus 153 --~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~---~~~~-~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~ 225 (307)
...++..+...|...|++++|...|++...... ..++ ...+..+...+...|++++|...+++.. ..... +.
T Consensus 152 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~~ 230 (307)
T 2ifu_A 152 RQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSGS 230 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTTS
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCCC
Confidence 145788889999999999999999999876421 0111 2366777778888899999999999988 42111 11
Q ss_pred ---HhHHHHHHHHHccCcHHHHHHH
Q 021791 226 ---DSYTMLIHGLCEKQKWKEACQY 247 (307)
Q Consensus 226 ---~~~~~li~~~~~~g~~~~a~~~ 247 (307)
.....++.++ ..|+.+.+..+
T Consensus 231 ~e~~~l~~l~~~~-~~~d~~~~~~~ 254 (307)
T 2ifu_A 231 EDCAALEDLLQAY-DEQDEEQLLRV 254 (307)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhcCHHHHHHH
Confidence 2344455555 46776655553
No 118
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=99.00 E-value=9e-08 Score=83.10 Aligned_cols=221 Identities=10% Similarity=0.028 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHH-HHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHH
Q 021791 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSL-DKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGE 144 (307)
Q Consensus 66 ~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~ 144 (307)
+.+..+|++.... .+-+...|...+..+...|+.++|. ++|+..... .+.+...|...+...-+.|+++.|..+|+.
T Consensus 326 ~Rv~~~Ye~aL~~-~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~-~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek 403 (679)
T 4e6h_A 326 ARMTYVYMQAAQH-VCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQC-IPNSAVLAFSLSEQYELNTKIPEIETTILS 403 (679)
T ss_dssp HHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4456678777766 3457888888999899999999997 999999875 344666677888888999999999999999
Q ss_pred HHhCC---------CCCC------------HhhHHHHHHHHhcCCChhHHHHHHHHHhhc-CCCCccHHHHHHHHHHHHh
Q 021791 145 MVRNG---------VSPS------------AETYNCFFKEYRGRKDANGAMKLYRQMKED-DLCVPNIHTYNILIGMFMA 202 (307)
Q Consensus 145 ~~~~~---------~~~~------------~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~ 202 (307)
+.... ..|+ ..+|...+....+.|+.+.|..+|....+. .. .....|...+..-.+
T Consensus 404 ~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~--~~~~lyi~~A~lE~~ 481 (679)
T 4e6h_A 404 CIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKL--VTPDIYLENAYIEYH 481 (679)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGG--SCTHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC--CChHHHHHHHHHHHH
Confidence 88641 0132 346888888888899999999999999876 32 233444433333334
Q ss_pred c-CcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCC--cHhhHHHHHHHHhhchhHHHH
Q 021791 203 L-NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP--QKVTFETLYRGLIQSDMLRTW 279 (307)
Q Consensus 203 ~-~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p--~~~~~~~l~~~~~~~g~~~~a 279 (307)
. ++.+.|.++|+...+. .+-+...|...+......|+.+.|..+|++.+.....+ ....|...+..-.+.|+.+.+
T Consensus 482 ~~~d~e~Ar~ife~~Lk~-~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~~~ 560 (679)
T 4e6h_A 482 ISKDTKTACKVLELGLKY-FATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLNSV 560 (679)
T ss_dssp TTSCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSHHH
T ss_pred hCCCHHHHHHHHHHHHHH-CCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 4 4599999999998876 33366777888888888999999999999998763221 335688888888889999999
Q ss_pred HHHHHHhhhcCC
Q 021791 280 RRLKKKLDEESI 291 (307)
Q Consensus 280 ~~~~~~~~~~~~ 291 (307)
..+.+++.+.-.
T Consensus 561 ~~v~~R~~~~~P 572 (679)
T 4e6h_A 561 RTLEKRFFEKFP 572 (679)
T ss_dssp HHHHHHHHHHST
T ss_pred HHHHHHHHHhCC
Confidence 999999976554
No 119
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.00 E-value=4.3e-08 Score=69.54 Aligned_cols=91 Identities=14% Similarity=0.091 Sum_probs=39.0
Q ss_pred HHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccC
Q 021791 160 FFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239 (307)
Q Consensus 160 l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g 239 (307)
+...+...|++++|...+.+..... +.+..++..+...+...|++++|...++...... +.+...+..+..++...|
T Consensus 19 ~a~~~~~~~~~~~A~~~~~~al~~~--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~a~~~~~~~ 95 (166)
T 1a17_A 19 QANDYFKAKDYENAIKFYSQAIELN--PSNAIYYGNRSLAYLRTECYGYALGDATRAIELD-KKYIKGYYRRAASNMALG 95 (166)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHhc
Confidence 3333344444444444444443332 2233444444444444444444444444444332 113344444444444444
Q ss_pred cHHHHHHHHHHHHH
Q 021791 240 KWKEACQYFVEMIE 253 (307)
Q Consensus 240 ~~~~a~~~~~~~~~ 253 (307)
++++|...+++..+
T Consensus 96 ~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 96 KFRAALRDYETVVK 109 (166)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 55555555444444
No 120
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.99 E-value=6.3e-07 Score=70.13 Aligned_cols=208 Identities=9% Similarity=0.038 Sum_probs=141.9
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchh---hHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 021791 72 FDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA---TYTSVVKCLCSCGRIEDAEELLGEMVRN 148 (307)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~---~~~~ll~~~~~~~~~~~a~~~~~~~~~~ 148 (307)
+.++......|+..+...+...+.-.- + .++ ......+.. .+...+..+...|++++|...+++....
T Consensus 34 ~s~~e~g~~~~~~~~l~~i~~~l~~~~--~---~~~----~~~~~~~~~~~~~l~~~i~~~~~~~~y~~a~~~~~~~l~~ 104 (293)
T 3u3w_A 34 VSRIESGAVYPSMDILQGIAAKLQIPI--I---HFY----EVLIYSDIERKKQFKDQVIMLCKQKRYKEIYNKVWNELKK 104 (293)
T ss_dssp HHHHHTTSCCCCHHHHHHHHHHHTCCT--H---HHH----HTTTSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHCCCCCCCHHHHHHHHHHhCcCH--H---HHh----CCCCCCcchhHHHHHHHHHHHHHHhhHHHHHHHHHHHhcc
Confidence 333333335677777766666554221 1 111 111122222 2334467788999999999999999874
Q ss_pred CC-CCCH----hhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCcc----HHHHHHHHHHHHhcCcHHHHHHHHHHHhh-
Q 021791 149 GV-SPSA----ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN----IHTYNILIGMFMALNRMDMVREIWNHVKG- 218 (307)
Q Consensus 149 ~~-~~~~----~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~a~~~~~~~~~- 218 (307)
.. .|+. ..+..+...+...+++++|...+++........++ ..+++.+...|...|++++|...++.+..
T Consensus 105 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 184 (293)
T 3u3w_A 105 EEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQ 184 (293)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 32 2221 13335677778888999999999999874321233 33689999999999999999999998874
Q ss_pred ---C-CCCC-CHHhHHHHHHHHHccCcHHHHHHHHHHHHHc----CCCCc-HhhHHHHHHHHhhch-hHHHHHHHHHHhh
Q 021791 219 ---S-ELGL-DLDSYTMLIHGLCEKQKWKEACQYFVEMIEK----GLLPQ-KVTFETLYRGLIQSD-MLRTWRRLKKKLD 287 (307)
Q Consensus 219 ---~-~~~~-~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~----~~~p~-~~~~~~l~~~~~~~g-~~~~a~~~~~~~~ 287 (307)
. +..+ ...++..+...|.+.|++++|...+++.++. +..+. ..++..+..++.+.| ..++|.+.+++..
T Consensus 185 ~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al 264 (293)
T 3u3w_A 185 LEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 1 1111 2336888999999999999999999988754 22222 567888889999999 4689988887764
Q ss_pred h
Q 021791 288 E 288 (307)
Q Consensus 288 ~ 288 (307)
.
T Consensus 265 ~ 265 (293)
T 3u3w_A 265 F 265 (293)
T ss_dssp H
T ss_pred H
Confidence 3
No 121
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.98 E-value=1.2e-08 Score=79.56 Aligned_cols=195 Identities=9% Similarity=-0.024 Sum_probs=133.5
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHH
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~ 162 (307)
+...+..+...+...|++++|...|+...+.... +...|..+..+|.+.|++++|...+++..+.... +...+..+..
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~ 80 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQ 80 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHH
Confidence 5667888889999999999999999999887533 7888999999999999999999999999887543 6788889999
Q ss_pred HHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHH
Q 021791 163 EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWK 242 (307)
Q Consensus 163 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~ 242 (307)
++...|++++|...|.+..+.. +.+...+...+....+.. .+.. +..........+......+ ..+. .|+++
T Consensus 81 ~~~~~g~~~~A~~~~~~al~l~--p~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~i~~~l-~~l~-~~~~~ 152 (281)
T 2c2l_A 81 CQLEMESYDEAIANLQRAYSLA--KEQRLNFGDDIPSALRIA---KKKR-WNSIEERRIHQESELHSYL-TRLI-AAERE 152 (281)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH--HHTTCCCCSHHHHHHHHH---HHHH-HHHHHHTCCCCCCHHHHHH-HHHH-HHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhC--ccchhhHHHHHHHHHHHH---HHHH-HHHHHHHHHhhhHHHHHHH-HHHH-HHHHH
Confidence 9999999999999999887653 111111111121111111 1111 1222222233344443333 3332 68999
Q ss_pred HHHHHHHHHHHcCCCCcHhhH-HHHHHHHhhc-hhHHHHHHHHHHhhhc
Q 021791 243 EACQYFVEMIEKGLLPQKVTF-ETLYRGLIQS-DMLRTWRRLKKKLDEE 289 (307)
Q Consensus 243 ~a~~~~~~~~~~~~~p~~~~~-~~l~~~~~~~-g~~~~a~~~~~~~~~~ 289 (307)
+|++.+++..+. .|+.... ..+...+.+. +.++++.++|++..+.
T Consensus 153 ~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~~~~~~~a~~~f~~a~~~ 199 (281)
T 2c2l_A 153 RELEECQRNHEG--HEDDGHIRAQQACIEAKHDKYMADMDELFSQVDEK 199 (281)
T ss_dssp HHHTTTSGGGTT--TSCHHHHTHHHHHHHHHHHHHHHHHHHHHHHSSCT
T ss_pred HHHHHHHhhhcc--ccchhhhhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 999999887754 5554433 3333334444 6788999999988664
No 122
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.98 E-value=2e-07 Score=73.05 Aligned_cols=170 Identities=8% Similarity=-0.102 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCc-----hhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCC---CC--
Q 021791 84 VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT-----VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS---PS-- 153 (307)
Q Consensus 84 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~---~~-- 153 (307)
...+...+..+...|++++|.+.+....+.....+ ...+..+...+...|++++|...+++....... +.
T Consensus 75 ~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 154 (293)
T 2qfc_A 75 KKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQN 154 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHH
Confidence 34555667778888999999998887776532211 122344556667788899999888887753211 11
Q ss_pred HhhHHHHHHHHhcCCChhHHHHHHHHHhh---cCCCCc--cHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCC----CCC-
Q 021791 154 AETYNCFFKEYRGRKDANGAMKLYRQMKE---DDLCVP--NIHTYNILIGMFMALNRMDMVREIWNHVKGSE----LGL- 223 (307)
Q Consensus 154 ~~~~~~l~~~~~~~~~~~~a~~~~~~~~~---~~~~~~--~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~----~~~- 223 (307)
..+++.+...|...|++++|...+++..+ .....+ ...++..+...|...|++++|...+++..... ...
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~ 234 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMAL 234 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHH
Confidence 34778888888889999999988888762 211011 12577888888888999999988888765431 111
Q ss_pred CHHhHHHHHHHHHccCcHHHH-HHHHHHHHH
Q 021791 224 DLDSYTMLIHGLCEKQKWKEA-CQYFVEMIE 253 (307)
Q Consensus 224 ~~~~~~~li~~~~~~g~~~~a-~~~~~~~~~ 253 (307)
-..+|..+..+|...|++++| ...+++...
T Consensus 235 ~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~ 265 (293)
T 2qfc_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKASF 265 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 145677888888888888888 666776653
No 123
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.97 E-value=8.1e-08 Score=68.09 Aligned_cols=132 Identities=14% Similarity=0.030 Sum_probs=107.4
Q ss_pred chhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHH
Q 021791 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197 (307)
Q Consensus 118 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~ 197 (307)
....+..+...+...|++++|...|++....... +..++..+...+...|++++|...+.+..... +.+...+..+.
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~a 88 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELD--KKYIKGYYRRA 88 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--cccHHHHHHHH
Confidence 3556788888999999999999999999886543 68889999999999999999999999999875 56788999999
Q ss_pred HHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHH--HHHHHccCcHHHHHHHHHHHHH
Q 021791 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTML--IHGLCEKQKWKEACQYFVEMIE 253 (307)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l--i~~~~~~g~~~~a~~~~~~~~~ 253 (307)
..+...|++++|...++........ +...+..+ ...+...|++++|+..+.+...
T Consensus 89 ~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 145 (166)
T 1a17_A 89 ASNMALGKFRAALRDYETVVKVKPH-DKDAKMKYQECNKIVKQKAFERAIAGDEHKRS 145 (166)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHHHHHHcccchHH
Confidence 9999999999999999999876432 44455333 3336677888888887776543
No 124
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.95 E-value=1.7e-08 Score=72.67 Aligned_cols=120 Identities=13% Similarity=0.195 Sum_probs=65.5
Q ss_pred hcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHH-HHhcCcH--H
Q 021791 131 SCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM-FMALNRM--D 207 (307)
Q Consensus 131 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~--~ 207 (307)
..|++++|...+++...... .+...+..+...|...|++++|...+++..... +.+...+..+..+ +...|++ +
T Consensus 22 ~~~~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~la~~l~~~~~~~~~~ 98 (177)
T 2e2e_A 22 SQQNPEAQLQALQDKIRANP-QNSEQWALLGEYYLWQNDYSNSLLAYRQALQLR--GENAELYAALATVLYYQASQHMTA 98 (177)
T ss_dssp -----CCCCHHHHHHHHHCC-SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH--CSCHHHHHHHHHHHHHHTTTCCCH
T ss_pred hccCHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHhcCCcchH
Confidence 34555555555555554432 244555555566666666666666666655543 3445555555555 5556665 6
Q ss_pred HHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 208 MVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 208 ~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
+|...++.+..... .+...+..+..++...|++++|...|+++.+.
T Consensus 99 ~A~~~~~~al~~~p-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 99 QTRAMIDKALALDS-NEITALMLLASDAFMQANYAQAIELWQKVMDL 144 (177)
T ss_dssp HHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCC-CcHHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Confidence 66666666655432 24555556666666666666666666666654
No 125
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.95 E-value=4.9e-08 Score=66.05 Aligned_cols=60 Identities=10% Similarity=0.009 Sum_probs=22.2
Q ss_pred hHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHh
Q 021791 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217 (307)
Q Consensus 156 ~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~ 217 (307)
.|..+..+|.+.|++++|+..+++..+.+ +.+...|..+..++...|++++|.+.|+...
T Consensus 49 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~--p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al 108 (126)
T 4gco_A 49 LYSNRAACLTKLMEFQRALDDCDTCIRLD--SKFIKGYIRKAACLVAMREWSKAQRAYEDAL 108 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhhHHHhhccHHHHHHHHHHHHHhh--hhhhHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 33333333333333333333333333332 2233333333333333333333333333333
No 126
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.95 E-value=3.5e-07 Score=71.63 Aligned_cols=169 Identities=9% Similarity=0.020 Sum_probs=125.6
Q ss_pred hhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCH-----hhHHHHHHHHhcCCChhHHHHHHHHHhhcCCC--Ccc--
Q 021791 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA-----ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC--VPN-- 189 (307)
Q Consensus 119 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~-- 189 (307)
...+...+..+...|++++|.+.+++..+....... ..+..+...+...|++++|...+.+....... .+.
T Consensus 75 ~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 154 (293)
T 2qfc_A 75 KKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQN 154 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHH
Confidence 345566778889999999999999988875432111 22344566778889999999999998754210 111
Q ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHhh---CC-CCC--CHHhHHHHHHHHHccCcHHHHHHHHHHHHHcC----CCC-
Q 021791 190 IHTYNILIGMFMALNRMDMVREIWNHVKG---SE-LGL--DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKG----LLP- 258 (307)
Q Consensus 190 ~~~~~~l~~~~~~~~~~~~a~~~~~~~~~---~~-~~~--~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~----~~p- 258 (307)
..+++.+...|...|++++|...+++... .. ..+ ...++..+..+|...|++++|+..+++.++.. ...
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~ 234 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMAL 234 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHH
Confidence 45889999999999999999999998772 21 111 12578899999999999999999999987542 111
Q ss_pred cHhhHHHHHHHHhhchhHHHH-HHHHHHhh
Q 021791 259 QKVTFETLYRGLIQSDMLRTW-RRLKKKLD 287 (307)
Q Consensus 259 ~~~~~~~l~~~~~~~g~~~~a-~~~~~~~~ 287 (307)
-..+|..+...+...|+.++| ...+++..
T Consensus 235 ~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 156788888999999999999 77676643
No 127
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.94 E-value=1.3e-07 Score=66.05 Aligned_cols=98 Identities=9% Similarity=0.056 Sum_probs=71.0
Q ss_pred HhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHH
Q 021791 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233 (307)
Q Consensus 154 ~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~ 233 (307)
...+..+...+.+.|++++|...|++..... +.+...|..+..++...|++++|...|++....... +...|..+..
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~--P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~-~~~~~~~lg~ 112 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYD--FYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN-DYTPVFHTGQ 112 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSS-CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCC-CcHHHHHHHH
Confidence 3456666667777777777777777777765 556777777777777777777777777777766432 5667777777
Q ss_pred HHHccCcHHHHHHHHHHHHHc
Q 021791 234 GLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 234 ~~~~~g~~~~a~~~~~~~~~~ 254 (307)
+|...|++++|...|++.++.
T Consensus 113 ~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 113 CQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHh
Confidence 777777777777777777765
No 128
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.93 E-value=6.2e-08 Score=65.53 Aligned_cols=110 Identities=11% Similarity=0.015 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHH
Q 021791 84 VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163 (307)
Q Consensus 84 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (307)
...+......+.+.|++++|++.|++..+.... +..+|..+..+|.+.|++++|+..+++..+.+.. +...|..+..+
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~ 90 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK-FIKGYIRKAAC 90 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh-hhHHHHHHHHH
Confidence 346778889999999999999999999887543 7889999999999999999999999999987544 68889999999
Q ss_pred HhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHH
Q 021791 164 YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197 (307)
Q Consensus 164 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~ 197 (307)
+...|++++|...|++..+.. |.+......+.
T Consensus 91 ~~~~~~~~~A~~~~~~al~l~--P~~~~a~~~l~ 122 (126)
T 4gco_A 91 LVAMREWSKAQRAYEDALQVD--PSNEEAREGVR 122 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHC--cCCHHHHHHHH
Confidence 999999999999999999875 55566555544
No 129
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.93 E-value=8.1e-08 Score=64.35 Aligned_cols=98 Identities=12% Similarity=0.135 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHH
Q 021791 84 VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163 (307)
Q Consensus 84 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (307)
...+..+...+...|++++|.+.++++.+... .+..++..+...+...|++++|...++++..... .+..++..+...
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~ 86 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-NNAEAWYNLGNA 86 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc-CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC-ccHHHHHHHHHH
Confidence 34455555555566666666666655554432 2444555555555555566666555555554422 244455555555
Q ss_pred HhcCCChhHHHHHHHHHhhc
Q 021791 164 YRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 164 ~~~~~~~~~a~~~~~~~~~~ 183 (307)
+...|++++|...++++...
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 87 YYKQGDYDEAIEYYQKALEL 106 (125)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHh
Confidence 55555555555555555544
No 130
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.91 E-value=9.3e-08 Score=64.04 Aligned_cols=96 Identities=16% Similarity=0.189 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHH
Q 021791 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199 (307)
Q Consensus 120 ~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~ 199 (307)
..+..+...+...|++++|...++++..... .+..++..+...+...|++++|...++++.... +.+..++..+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~la~~ 86 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDP-NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--PNNAEAWYNLGNA 86 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc-CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--CccHHHHHHHHHH
Confidence 3444444555555555555555555544321 133444444444445555555555554444432 2334444444444
Q ss_pred HHhcCcHHHHHHHHHHHhh
Q 021791 200 FMALNRMDMVREIWNHVKG 218 (307)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~ 218 (307)
+...|++++|...++.+..
T Consensus 87 ~~~~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 87 YYKQGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHH
Confidence 4444444444444444443
No 131
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.91 E-value=8.7e-08 Score=65.09 Aligned_cols=116 Identities=11% Similarity=0.008 Sum_probs=63.8
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHH
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~ 162 (307)
+...+..+...+...|++++|...+++..+... .+...+..+...+...|++++|...+++....... +...+..+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~ 92 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNP-KDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAA 92 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCT-TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHH
Confidence 444555666666666666666666666655432 24555555666666666666666666665554322 4455555555
Q ss_pred HHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHh
Q 021791 163 EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA 202 (307)
Q Consensus 163 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 202 (307)
.+...|++++|...+++..... +.+...+..+...+..
T Consensus 93 ~~~~~~~~~~A~~~~~~~~~~~--p~~~~~~~~l~~~~~~ 130 (133)
T 2lni_A 93 ALEAMKDYTKAMDVYQKALDLD--SSCKEAADGYQRCMMA 130 (133)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC--GGGTHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHhC--CCchHHHHHHHHHHHH
Confidence 5666666666666666555543 2333444444444433
No 132
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.91 E-value=2.4e-08 Score=73.48 Aligned_cols=159 Identities=9% Similarity=-0.023 Sum_probs=103.7
Q ss_pred HhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhC----CCC-CCHhhHHHHHHHHhcCCC
Q 021791 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN----GVS-PSAETYNCFFKEYRGRKD 169 (307)
Q Consensus 95 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~----~~~-~~~~~~~~l~~~~~~~~~ 169 (307)
...|++++|.+.++.+.. .......++..+...+...|++++|...+++.... +.. ....++..+...+...|+
T Consensus 3 ~~~g~~~~A~~~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 81 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLA-HPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGN 81 (203)
T ss_dssp ----CHHHHHHHHHHHHT-STTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCC
Confidence 457888888885555433 22235667788888888888888888888877652 111 124566777778888888
Q ss_pred hhHHHHHHHHHhhc---CCCC--ccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCC-CCC----HHhHHHHHHHHHccC
Q 021791 170 ANGAMKLYRQMKED---DLCV--PNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL-GLD----LDSYTMLIHGLCEKQ 239 (307)
Q Consensus 170 ~~~a~~~~~~~~~~---~~~~--~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~-~~~----~~~~~~li~~~~~~g 239 (307)
+++|...+.+.... .... ....++..+...+...|++++|...+++...... ..+ ..++..+...+...|
T Consensus 82 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 161 (203)
T 3gw4_A 82 WDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEK 161 (203)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCc
Confidence 88888888876654 1001 1234567777788888888888888877653210 012 223566777778888
Q ss_pred cHHHHHHHHHHHHHc
Q 021791 240 KWKEACQYFVEMIEK 254 (307)
Q Consensus 240 ~~~~a~~~~~~~~~~ 254 (307)
++++|...+++..+.
T Consensus 162 ~~~~A~~~~~~al~~ 176 (203)
T 3gw4_A 162 NLLEAQQHWLRARDI 176 (203)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 888888888877665
No 133
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.90 E-value=2.6e-07 Score=64.49 Aligned_cols=98 Identities=14% Similarity=0.034 Sum_probs=69.1
Q ss_pred hhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHH
Q 021791 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198 (307)
Q Consensus 119 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (307)
...+..+...+.+.|++++|...|++.....+. +...|..+..+|...|++++|...|++..... +.+...|..+..
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~--P~~~~~~~~lg~ 112 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALG--KNDYTPVFHTGQ 112 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--SSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC--CCCcHHHHHHHH
Confidence 445666666777777777777777777765433 56677777777777777777777777777665 455667777777
Q ss_pred HHHhcCcHHHHHHHHHHHhhC
Q 021791 199 MFMALNRMDMVREIWNHVKGS 219 (307)
Q Consensus 199 ~~~~~~~~~~a~~~~~~~~~~ 219 (307)
+|...|++++|...|+.....
T Consensus 113 ~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 113 CQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHh
Confidence 777777777777777777665
No 134
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.89 E-value=8.4e-08 Score=65.17 Aligned_cols=97 Identities=11% Similarity=0.053 Sum_probs=47.8
Q ss_pred hhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHH
Q 021791 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198 (307)
Q Consensus 119 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (307)
...+..+...+...|++++|...|++....... +...+..+...+...|++++|...+++..+.. +.+...+..+..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~la~ 92 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLE--PTFIKGYTRKAA 92 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC--CCchHHHHHHHH
Confidence 444455555555555555555555555543221 34444555555555555555555555554443 333444444444
Q ss_pred HHHhcCcHHHHHHHHHHHhh
Q 021791 199 MFMALNRMDMVREIWNHVKG 218 (307)
Q Consensus 199 ~~~~~~~~~~a~~~~~~~~~ 218 (307)
.+...|++++|.+.++....
T Consensus 93 ~~~~~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 93 ALEAMKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHH
Confidence 55555555555555544443
No 135
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.88 E-value=9.7e-08 Score=64.54 Aligned_cols=118 Identities=9% Similarity=-0.018 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHH
Q 021791 84 VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE 163 (307)
Q Consensus 84 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (307)
...+..+...+...|++++|...++...+... .+...+..+...+...|++++|...+++....... +...+..+...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~ 89 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIELNP-ANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLA 89 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHH
Confidence 34455555556666666666666666555432 24455555555666666666666666655554222 34455555555
Q ss_pred HhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCc
Q 021791 164 YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205 (307)
Q Consensus 164 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 205 (307)
+...|++++|...+++..... +.+...+..+..++...|+
T Consensus 90 ~~~~~~~~~A~~~~~~~~~~~--p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 90 LSSLNKHVEAVAYYKKALELD--PDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp HHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHHTT
T ss_pred HHHhCCHHHHHHHHHHHHhcC--ccchHHHHHHHHHHHHHhc
Confidence 555566666665555555543 3344444455444444443
No 136
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.88 E-value=5.7e-08 Score=69.94 Aligned_cols=120 Identities=11% Similarity=0.083 Sum_probs=71.2
Q ss_pred hcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHH-HhcCCCh--hH
Q 021791 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKE-YRGRKDA--NG 172 (307)
Q Consensus 96 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~--~~ 172 (307)
..|++++|...++...+... .+...+..+...|...|++++|...|++....... +...+..+..+ +...|++ ++
T Consensus 22 ~~~~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~ 99 (177)
T 2e2e_A 22 SQQNPEAQLQALQDKIRANP-QNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQ 99 (177)
T ss_dssp -----CCCCHHHHHHHHHCC-SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHH
T ss_pred hccCHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHH
Confidence 34556666666666655432 25556666666666666666666666666654322 45555555555 5566666 66
Q ss_pred HHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhC
Q 021791 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219 (307)
Q Consensus 173 a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 219 (307)
|...+++..... +.+...+..+...+...|++++|...++.+...
T Consensus 100 A~~~~~~al~~~--p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 100 TRAMIDKALALD--SNEITALMLLASDAFMQANYAQAIELWQKVMDL 144 (177)
T ss_dssp HHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhC--CCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Confidence 777766666654 445566666666666777777777777666654
No 137
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.88 E-value=8.9e-08 Score=76.55 Aligned_cols=151 Identities=11% Similarity=-0.017 Sum_probs=102.3
Q ss_pred CchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCC--------------HhhHHHHHHHH
Q 021791 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS--------------AETYNCFFKEY 164 (307)
Q Consensus 99 ~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~--------------~~~~~~l~~~~ 164 (307)
++++|...++...+... -+...+..+...|.+.|++++|...|++......... ...|..+..+|
T Consensus 128 ~~~~A~~~~~~a~~~~p-~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~ 206 (336)
T 1p5q_A 128 SFEKAKESWEMNSEEKL-EQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCH 206 (336)
T ss_dssp EEECCCCGGGCCHHHHH-HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecccccchhcCCHHHHH-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHH
Confidence 34445544443332211 1455677777888888888888888888777543321 46777777778
Q ss_pred hcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHH
Q 021791 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244 (307)
Q Consensus 165 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a 244 (307)
.+.|++++|...+++..... +.+...+..+..++...|++++|...|+.+..... -+...+..+..++...|++++|
T Consensus 207 ~~~g~~~~A~~~~~~al~~~--p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P-~~~~a~~~l~~~~~~~~~~~~a 283 (336)
T 1p5q_A 207 LKLQAFSAAIESCNKALELD--SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYP-NNKAAKTQLAVCQQRIRRQLAR 283 (336)
T ss_dssp HHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS-SCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888877765 55677777778888888888888888877776542 2566777777777777777777
Q ss_pred -HHHHHHHHH
Q 021791 245 -CQYFVEMIE 253 (307)
Q Consensus 245 -~~~~~~~~~ 253 (307)
...++.|.+
T Consensus 284 ~~~~~~~~~~ 293 (336)
T 1p5q_A 284 EKKLYANMFE 293 (336)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 445555543
No 138
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.86 E-value=7.9e-07 Score=70.41 Aligned_cols=219 Identities=10% Similarity=0.006 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC-CchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhc-C-ChHHHHHH
Q 021791 65 IRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH-KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC-G-RIEDAEEL 141 (307)
Q Consensus 65 ~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~-~~~~a~~~ 141 (307)
.++|+++++.+.... +-+..+|+.--..+...| ++++++++++.+.....+ +..+|+.-...+.+. + ++++++++
T Consensus 70 se~AL~lt~~~L~~n-P~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~~~~~~~EL~~ 147 (349)
T 3q7a_A 70 SERALELTEIIVRMN-PAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRISPQDPVSEIEY 147 (349)
T ss_dssp SHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHCCSCCHHHHHH
T ss_pred CHHHHHHHHHHHHhC-chhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcCCChHHHHHH
Confidence 367999999998874 336677888888888888 599999999999988655 777888877777776 7 88999999
Q ss_pred HHHHHhCCCCCCHhhHHHHHHHHhcCCChh--------HHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCc-------H
Q 021791 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDAN--------GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR-------M 206 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~ 206 (307)
++.+.+...+ +..+|+.-.....+.+.++ ++++.++++.+.+ +-|...|+.....+.+.+. +
T Consensus 148 ~~k~L~~dpk-Ny~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~d--p~N~SAW~~R~~lL~~l~~~~~~~~~~ 224 (349)
T 3q7a_A 148 IHGSLLPDPK-NYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVD--GRNNSAWGWRWYLRVSRPGAETSSRSL 224 (349)
T ss_dssp HHHHTSSCTT-CHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHTTSTTCCCCHHHH
T ss_pred HHHHHHhCCC-CHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHhccccccchHHH
Confidence 9999987655 7778776655555555555 8999999998886 6788999988888888776 6
Q ss_pred HHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcH--------------------HHHHHHHHHHHHcC-----CCCcHh
Q 021791 207 DMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW--------------------KEACQYFVEMIEKG-----LLPQKV 261 (307)
Q Consensus 207 ~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~--------------------~~a~~~~~~~~~~~-----~~p~~~ 261 (307)
+++++.++........ |...|+.+-..+.+.|+. ........++...+ -.+++.
T Consensus 225 ~eELe~~~~aI~~~P~-n~SaW~Ylr~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 303 (349)
T 3q7a_A 225 QDELIYILKSIHLIPH-NVSAWNYLRGFLKHFSLPLVPILPAILPYTASKLNPDIETVEAFGFPMPSDPLPEDTPLPVPL 303 (349)
T ss_dssp HHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCSGGGHHHHGGGTC--------------CCCCC-CCCSSCCSCCHH
T ss_pred HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhcCCCcccccccccccccccccccchhHHHHHHHHHhcccccccCCCcHH
Confidence 8888888888876543 777887766666655543 33333333333321 135777
Q ss_pred hHHHHHHHHhhchhHHHHHHHHHHhhhc
Q 021791 262 TFETLYRGLIQSDMLRTWRRLKKKLDEE 289 (307)
Q Consensus 262 ~~~~l~~~~~~~g~~~~a~~~~~~~~~~ 289 (307)
.+..++..|...|+.++|.++++.+.+.
T Consensus 304 al~~l~d~~~~~~~~~~a~~~~~~l~~~ 331 (349)
T 3q7a_A 304 ALEYLADSFIEQNRVDDAAKVFEKLSSE 331 (349)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhh
Confidence 8889999999999999999999998643
No 139
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.86 E-value=1.1e-07 Score=64.34 Aligned_cols=97 Identities=11% Similarity=0.026 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHH
Q 021791 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199 (307)
Q Consensus 120 ~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~ 199 (307)
..+..+...+...|++++|...+++...... .+...+..+...+...|++++|...+.+..... +.+...+..+...
T Consensus 13 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~~~~ 89 (131)
T 2vyi_A 13 ERLKTEGNEQMKVENFEAAVHFYGKAIELNP-ANAVYFCNRAAAYSKLGNYAGAVQDCERAICID--PAYSKAYGRMGLA 89 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcC--ccCHHHHHHHHHH
Confidence 3444444555555555555555555544322 134444444445555555555555555544432 2334444444444
Q ss_pred HHhcCcHHHHHHHHHHHhhC
Q 021791 200 FMALNRMDMVREIWNHVKGS 219 (307)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~ 219 (307)
+...|++++|...++.....
T Consensus 90 ~~~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 90 LSSLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHhc
Confidence 44455555555544444443
No 140
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.83 E-value=5.2e-08 Score=67.96 Aligned_cols=98 Identities=10% Similarity=-0.056 Sum_probs=63.2
Q ss_pred HhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHH
Q 021791 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233 (307)
Q Consensus 154 ~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~ 233 (307)
...+..+...+...|++++|...|+...... +.+...|..+..++...|++++|...++....... .+...+..+..
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p-~~~~~~~~lg~ 97 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVLD--HYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI-XEPRFPFHAAE 97 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-TCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHcC--cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC-CCchHHHHHHH
Confidence 3445555666666677777777776666654 45666666666667777777777777776665532 24556666666
Q ss_pred HHHccCcHHHHHHHHHHHHHc
Q 021791 234 GLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 234 ~~~~~g~~~~a~~~~~~~~~~ 254 (307)
+|...|++++|...|++.++.
T Consensus 98 ~~~~~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 98 CLLQXGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHH
Confidence 777777777777777766654
No 141
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.83 E-value=1.7e-07 Score=74.88 Aligned_cols=132 Identities=11% Similarity=-0.037 Sum_probs=114.0
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCc--------------hhhHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT--------------VATYTSVVKCLCSCGRIEDAEELLGEMVRN 148 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~--------------~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~ 148 (307)
+...+..+...+.+.|++++|...|++..+...... ...|..+..+|.+.|++++|...+++..+.
T Consensus 146 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 225 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALEL 225 (336)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 456788899999999999999999999988754322 588999999999999999999999999987
Q ss_pred CCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHH-HHHHHHh
Q 021791 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVR-EIWNHVK 217 (307)
Q Consensus 149 ~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~-~~~~~~~ 217 (307)
... +...+..+..+|...|++++|...|++..+.. +.+...+..+..++...|+.+++. ..++.|.
T Consensus 226 ~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~--P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 226 DSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLY--PNNKAAKTQLAVCQQRIRRQLAREKKLYANMF 292 (336)
T ss_dssp CTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 543 78899999999999999999999999999886 567888999999999999999884 4566554
No 142
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.83 E-value=7e-08 Score=70.94 Aligned_cols=156 Identities=10% Similarity=-0.004 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHc----CCC-CchhhHHHHHHHHHhcCChH
Q 021791 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK----GIC-PTVATYTSVVKCLCSCGRIE 136 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~----~~~-~~~~~~~~ll~~~~~~~~~~ 136 (307)
.|++++|.+.++.+... .......+..+...+...|++++|...+++..+. +.. ....++..+...+...|+++
T Consensus 5 ~g~~~~A~~~~~~~~~~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 83 (203)
T 3gw4_A 5 AHDYALAERQAQALLAH-PATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWD 83 (203)
T ss_dssp --CHHHHHHHHHHHHTS-TTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred cccHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHH
Confidence 56777777754444332 2235567777777777888888888887776552 111 13455667777777888888
Q ss_pred HHHHHHHHHHhC----CCCC--CHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCC--Ccc--HHHHHHHHHHHHhcCcH
Q 021791 137 DAEELLGEMVRN----GVSP--SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC--VPN--IHTYNILIGMFMALNRM 206 (307)
Q Consensus 137 ~a~~~~~~~~~~----~~~~--~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~--~~~~~~l~~~~~~~~~~ 206 (307)
+|...+++.... +..+ ....+..+...+...|++++|...+++....... .+. ..++..+...+...|++
T Consensus 84 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 163 (203)
T 3gw4_A 84 AARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNL 163 (203)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCH
Confidence 888777776543 1111 1345666677777778888888887776543110 111 22346667777777888
Q ss_pred HHHHHHHHHHhh
Q 021791 207 DMVREIWNHVKG 218 (307)
Q Consensus 207 ~~a~~~~~~~~~ 218 (307)
++|.+.+++...
T Consensus 164 ~~A~~~~~~al~ 175 (203)
T 3gw4_A 164 LEAQQHWLRARD 175 (203)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 887777766554
No 143
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.81 E-value=1.4e-08 Score=74.64 Aligned_cols=30 Identities=10% Similarity=-0.077 Sum_probs=18.2
Q ss_pred hhhHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 021791 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRN 148 (307)
Q Consensus 119 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~ 148 (307)
...+..+...+...|++++|...|++....
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 67 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDF 67 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 334555566666666666666666666653
No 144
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.79 E-value=7.4e-08 Score=74.98 Aligned_cols=195 Identities=8% Similarity=-0.025 Sum_probs=115.8
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCC
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 82 (307)
+...+..+...+...|++++|...|++..... +-+...|..+..++.. .|++++|...+++..+.. +.
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~----------~~~~~~A~~~~~~al~~~-p~ 70 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALCYLK----------MQQPEQALADCRRALELD-GQ 70 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHH----------TTCHHHHHHHHHHHTTSC-TT
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHH----------hcCHHHHHHHHHHHHHhC-CC
Confidence 45677778888888888888888888887762 2256677777777777 777888888888887663 33
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHH
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~ 162 (307)
+...+..+..++...|++++|...|+...+.+.. +...+...+....+. .++.. +..........+......+ .
T Consensus 71 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~i~~~l-~ 144 (281)
T 2c2l_A 71 SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE-QRLNFGDDIPSALRI---AKKKR-WNSIEERRIHQESELHSYL-T 144 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCCCCSHHHHHHHH---HHHHH-HHHHHHTCCCCCCHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chhhHHHHHHHHHHH---HHHHH-HHHHHHHHHhhhHHHHHHH-H
Confidence 6677788888888888888888888777654211 111111111111111 11111 1122222233333333333 2
Q ss_pred HHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhc-CcHHHHHHHHHHHhh
Q 021791 163 EYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL-NRMDMVREIWNHVKG 218 (307)
Q Consensus 163 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~a~~~~~~~~~ 218 (307)
.+ ..|+.++|.+.++...+.. +.+......+...+.+. +.+++|.++|..+.+
T Consensus 145 ~l-~~~~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~~~~~~~a~~~f~~a~~ 198 (281)
T 2c2l_A 145 RL-IAAERERELEECQRNHEGH--EDDGHIRAQQACIEAKHDKYMADMDELFSQVDE 198 (281)
T ss_dssp HH-HHHHHHHHHTTTSGGGTTT--SCHHHHTHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HH-HHHHHHHHHHHHHhhhccc--cchhhhhhHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 22 2577777777777766653 33444444444444444 567778888876654
No 145
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.78 E-value=2.1e-05 Score=66.13 Aligned_cols=269 Identities=8% Similarity=-0.043 Sum_probs=136.2
Q ss_pred CccHHHHHHHHHHHHhcCc-hhhHHHHHHHHHhc-CCC-CcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHh
Q 021791 1 MPNVKMYTSLIYGWCKINR-IDMAERFLGEMIER-GVE-PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRV 77 (307)
Q Consensus 1 ~p~~~~~~~li~~~~~~g~-~~~a~~~~~~~~~~-~~~-p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 77 (307)
.|++..|...+....+.+. .+....+|+..+.. |.. ++...|...+.-+.... .-.++++.+.++|++...
T Consensus 44 ~ps~~LW~~Y~~f~~~~~~~~~~i~~~fe~al~~vg~d~~s~~iW~~Yi~f~~~~~------~~~~~~~~vR~iy~rAL~ 117 (493)
T 2uy1_A 44 SYNLDLWMLYIEYVRKVSQKKFKLYEVYEFTLGQFENYWDSYGLYKEYIEEEGKIE------DEQTRIEKIRNGYMRALQ 117 (493)
T ss_dssp CCCHHHHHHHHHHHHHHC----CTHHHHHHHHHHSTTCTTCHHHHHHHHHHTSSCS------SHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHhch------hhhHHHHHHHHHHHHHHh
Confidence 3777778777777777663 45667777777654 432 35566666665433210 005677788888888876
Q ss_pred cCCCCCHHHH------------------------------------------------HHHHHHHHhc--CC-----chh
Q 021791 78 RGIEPDVTSF------------------------------------------------SIVLHVYSRA--HK-----PQL 102 (307)
Q Consensus 78 ~~~~~~~~~~------------------------------------------------~~ll~~~~~~--~~-----~~~ 102 (307)
.....-...| ...+..-... |- .+.
T Consensus 118 ~P~~~~~~lw~~Y~~fE~~~~~~~~~~~~~~~~~~y~~ar~~y~~~~~~~~~~s~~~W~~y~~~E~~~~~~~~~~~~~~R 197 (493)
T 2uy1_A 118 TPMGSLSELWKDFENFELELNKITGKKIVGDTLPIFQSSFQRYQQIQPLIRGWSVKNAARLIDLEMENGMKLGGRPHESR 197 (493)
T ss_dssp SCCTTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCTTCCCHHHHHHH
T ss_pred ChhhhHHHHHHHHHHHHHHhccccHHHHHHHHhHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHhcCCccCcchhhHHH
Confidence 3211111111 1111111111 00 123
Q ss_pred HHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHH------------------------
Q 021791 103 SLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN------------------------ 158 (307)
Q Consensus 103 a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~------------------------ 158 (307)
+..+|+++.... +.+...|...+..+.+.|+++.|..++++.... +.+...+.
T Consensus 198 v~~~ye~al~~~-p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~--P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~ 274 (493)
T 2uy1_A 198 MHFIHNYILDSF-YYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM--SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEA 274 (493)
T ss_dssp HHHHHHHHHHHT-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CCSSHHHHHHHHHTTCTHHHHHHHHHTC----
T ss_pred HHHHHHHHHHcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC--CCcHHHHHHHHhhcchhHHHHHHHHHHHhhcc
Confidence 456677766653 335677777788888889999999999988876 22322221
Q ss_pred ----------------HHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhc-CcHHHHHHHHHHHhhCCC
Q 021791 159 ----------------CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL-NRMDMVREIWNHVKGSEL 221 (307)
Q Consensus 159 ----------------~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~a~~~~~~~~~~~~ 221 (307)
..+....+.++.+.|..+|... ... ..+..+|......-... ++.+.|..+|+...+..
T Consensus 275 ~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~--~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~- 350 (493)
T 2uy1_A 275 ESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNE--GVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKH- 350 (493)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTS--CCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHC-
T ss_pred chhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCC--CCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHC-
Confidence 1111122234455555555555 211 12222332211111111 24555666665555432
Q ss_pred CCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhh
Q 021791 222 GLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287 (307)
Q Consensus 222 ~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~ 287 (307)
+-+...+...++...+.|+.+.|..+|+++. .....|...+.--...|+.+.+..++++..
T Consensus 351 ~~~~~~~~~yid~e~~~~~~~~aR~l~er~~-----k~~~lw~~~~~fE~~~G~~~~~r~v~~~~~ 411 (493)
T 2uy1_A 351 PDSTLLKEEFFLFLLRIGDEENARALFKRLE-----KTSRMWDSMIEYEFMVGSMELFRELVDQKM 411 (493)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHSC-----CBHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 1123334444444455555566666655541 133445555554455566666666665554
No 146
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.77 E-value=5.3e-08 Score=67.92 Aligned_cols=98 Identities=8% Similarity=-0.042 Sum_probs=55.4
Q ss_pred hhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHH
Q 021791 119 VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198 (307)
Q Consensus 119 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (307)
...+..+...+...|++++|...|++....... +...|..+..+|...|++++|...|++..... +.+...+..+..
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~--p~~~~~~~~lg~ 97 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD--IXEPRFPFHAAE 97 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC--CCCchHHHHHHH
Confidence 334445555555666666666666655554322 45555555556666666666666666655553 344555555666
Q ss_pred HHHhcCcHHHHHHHHHHHhhC
Q 021791 199 MFMALNRMDMVREIWNHVKGS 219 (307)
Q Consensus 199 ~~~~~~~~~~a~~~~~~~~~~ 219 (307)
++...|++++|.+.|+.....
T Consensus 98 ~~~~~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 98 CLLQXGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHH
Confidence 666666666666666655543
No 147
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.75 E-value=8.4e-07 Score=58.60 Aligned_cols=97 Identities=9% Similarity=-0.085 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHH
Q 021791 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164 (307)
Q Consensus 85 ~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (307)
..+..+...+...|++++|...++...+... .+...+..+...+...|++++|...+++....... +...+..+..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~ 82 (118)
T 1elw_A 5 NELKEKGNKALSVGNIDDALQCYSEAIKLDP-HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCC-CcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHH
Confidence 3444555555556666666666655555432 24445555555555555555555555555544322 344555555555
Q ss_pred hcCCChhHHHHHHHHHhhc
Q 021791 165 RGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 165 ~~~~~~~~a~~~~~~~~~~ 183 (307)
...|++++|...+++..+.
T Consensus 83 ~~~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 83 EFLNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp HHTTCHHHHHHHHHHHHTT
T ss_pred HHHhhHHHHHHHHHHHHHc
Confidence 5555555555555555544
No 148
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.75 E-value=5.8e-07 Score=68.89 Aligned_cols=196 Identities=12% Similarity=-0.025 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHH-------HHHHHhcCCchhHHHHHHHHHHcCCCCc----------------
Q 021791 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIV-------LHVYSRAHKPQLSLDKLNFMKEKGICPT---------------- 118 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~l-------l~~~~~~~~~~~a~~~~~~~~~~~~~~~---------------- 118 (307)
.++...|.+.|.++.+.. +-....|..+ ...+.+.++..+++..+..-.+ +.|+
T Consensus 19 ~~d~~~A~~~F~~a~~~d-P~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~--l~p~~l~a~~~~~g~y~~~~ 95 (282)
T 4f3v_A 19 PMSEARSLDLFTEITNYD-ESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQ--ISMSTLNARIAIGGLYGDIT 95 (282)
T ss_dssp TTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTT--CCGGGGCCEEECCTTTCCCE
T ss_pred CCCHHHHHHHHHHHHHhC-hhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhc--CChhhhhhhhccCCcccccc
Confidence 577899999999998874 3367778877 4555555555666555555443 1221
Q ss_pred ------hhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCcc--H
Q 021791 119 ------VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN--I 190 (307)
Q Consensus 119 ------~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~--~ 190 (307)
......+...+...|++++|.++|+.+...+ |+......+...+.+.+++++|+..|+...... .|. .
T Consensus 96 ~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~--p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~~~--d~~~~~ 171 (282)
T 4f3v_A 96 YPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAG--SEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWP--DKFLAG 171 (282)
T ss_dssp EECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTT--CHHHHHHHHHHHHHHTTCHHHHHHHHTTGGGCS--CHHHHH
T ss_pred cccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHcCCHHHHHHHHHHhhccC--CcccHH
Confidence 1223456677889999999999999887654 443355566668899999999999998665432 121 3
Q ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCC--HHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHH
Q 021791 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLD--LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266 (307)
Q Consensus 191 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l 266 (307)
..+..+..++...|++++|+..|++.......|. .........++.+.|+.++|...|+++... .|+......|
T Consensus 172 ~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~--~P~~~~~~aL 247 (282)
T 4f3v_A 172 AAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTT--HPEPKVAAAL 247 (282)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--SCCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCcHHHHHHH
Confidence 4678889999999999999999999985433243 345667777889999999999999999986 4554334333
No 149
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.75 E-value=5.1e-07 Score=69.20 Aligned_cols=190 Identities=11% Similarity=-0.103 Sum_probs=140.5
Q ss_pred hcCCchhHHHHHHHHHHcCCCCchhhHHHH-------HHHHHhcCChHHHHHHHHHHHhCCCCCC---------------
Q 021791 96 RAHKPQLSLDKLNFMKEKGICPTVATYTSV-------VKCLCSCGRIEDAEELLGEMVRNGVSPS--------------- 153 (307)
Q Consensus 96 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l-------l~~~~~~~~~~~a~~~~~~~~~~~~~~~--------------- 153 (307)
..++...|.+.|.++.+.... ....|..+ ...+.+.++..+++..+..-.. +.|+
T Consensus 18 ~~~d~~~A~~~F~~a~~~dP~-~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~--l~p~~l~a~~~~~g~y~~~ 94 (282)
T 4f3v_A 18 LPMSEARSLDLFTEITNYDES-ACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQ--ISMSTLNARIAIGGLYGDI 94 (282)
T ss_dssp TTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTT--CCGGGGCCEEECCTTTCCC
T ss_pred cCCCHHHHHHHHHHHHHhChh-hhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhc--CChhhhhhhhccCCccccc
Confidence 679999999999999988644 66777766 4555555556666655555443 1221
Q ss_pred -------HhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCC--
Q 021791 154 -------AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLD-- 224 (307)
Q Consensus 154 -------~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~-- 224 (307)
......+...+...|++++|.++|..+...+ |+......+...+.+.+++++|+..|+...... .|.
T Consensus 95 ~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~---p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~~~-d~~~~ 170 (282)
T 4f3v_A 95 TYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAG---SEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWP-DKFLA 170 (282)
T ss_dssp EEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTT---CHHHHHHHHHHHHHHTTCHHHHHHHHTTGGGCS-CHHHH
T ss_pred ccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC---CchHHHHHHHHHHHHcCCHHHHHHHHHHhhccC-CcccH
Confidence 2234456677889999999999999998764 444366777778999999999999998665532 111
Q ss_pred HHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCc--HhhHHHHHHHHhhchhHHHHHHHHHHhhhcCCC
Q 021791 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQ--KVTFETLYRGLIQSDMLRTWRRLKKKLDEESIT 292 (307)
Q Consensus 225 ~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~--~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~~~ 292 (307)
...+..+-.++...|++++|+..|++.......|. .........++.+.|+.++|..+|+++......
T Consensus 171 ~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 171 GAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 23677788899999999999999999985433253 335666777899999999999999999776543
No 150
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.75 E-value=2.9e-08 Score=72.94 Aligned_cols=163 Identities=9% Similarity=-0.119 Sum_probs=107.1
Q ss_pred HHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCcc--------------H
Q 021791 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN--------------I 190 (307)
Q Consensus 125 ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~--------------~ 190 (307)
.+......|+++++.+.|+.-..... .....+..+...+...|++++|...|.+........|+ .
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 88 (198)
T 2fbn_A 10 HSSGRENLYFQGAKKSIYDYTDEEKV-QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEI 88 (198)
T ss_dssp ------------CCCSGGGCCHHHHH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhccccCchhhCCHHHHH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHH
Confidence 33444555666666666543222111 13456777888899999999999999999876421121 2
Q ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHH
Q 021791 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGL 270 (307)
Q Consensus 191 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~ 270 (307)
.++..+..++...|++++|...++...... +.+...+..+..+|...|++++|...|++.++.. +-+...+..+..++
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKID-KNNVKALYKLGVANMYFGFLEEAKENLYKAASLN-PNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCcHHHHHHHHHHH
Confidence 788899999999999999999999998874 3378889999999999999999999999998763 33556777777788
Q ss_pred hhchhHHHHH-HHHHHhhhcC
Q 021791 271 IQSDMLRTWR-RLKKKLDEES 290 (307)
Q Consensus 271 ~~~g~~~~a~-~~~~~~~~~~ 290 (307)
...++.+++. ..+..+-..+
T Consensus 167 ~~~~~~~~~~~~~~~~~f~~~ 187 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFDKG 187 (198)
T ss_dssp HHHHHHHC-------------
T ss_pred HHHHHHHHHHHHHHHHHhccc
Confidence 8888887777 5555554443
No 151
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.73 E-value=1.4e-05 Score=63.02 Aligned_cols=216 Identities=10% Similarity=-0.014 Sum_probs=157.0
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC----------chhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcC--
Q 021791 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHK----------PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG-- 133 (307)
Q Consensus 66 ~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~----------~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-- 133 (307)
++|+++++.+.... +-+...|+.--..+...+. +++++.+++.+.....+ +..+|+.-...+.+.+
T Consensus 47 ~eaL~~t~~~L~~n-P~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~ 124 (331)
T 3dss_A 47 ESVLELTSQILGAN-PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEP 124 (331)
T ss_dssp HHHHHHHHHHHTTC-TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHC-chhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcc
Confidence 57899999998763 2245556654444443333 57888899998887654 7788888777777877
Q ss_pred ChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCC-hhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhc---------
Q 021791 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD-ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL--------- 203 (307)
Q Consensus 134 ~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------- 203 (307)
.+++++.+++.+.+...+ |..+|+.-.......|. ++++++.+..+.+.+ +-|...|+.....+...
T Consensus 125 ~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~--p~N~SAW~~R~~ll~~l~~~~~~~~~ 201 (331)
T 3dss_A 125 NWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRN--FSNYSSWHYRSCLLPQLHPQPDSGPQ 201 (331)
T ss_dssp CHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC--SCCHHHHHHHHHHHHHHSCCC-----
T ss_pred cHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHhhhccccccc
Confidence 489999999999988765 88888877777777888 589999999999886 67888888777766655
Q ss_pred -----CcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHcc-----------CcHHHHHHHHHHHHHcCCCCcHh-hHHHH
Q 021791 204 -----NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK-----------QKWKEACQYFVEMIEKGLLPQKV-TFETL 266 (307)
Q Consensus 204 -----~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~-----------g~~~~a~~~~~~~~~~~~~p~~~-~~~~l 266 (307)
+.++++.+.+.......+. |...|+-+-..+.+. +.++++++.++++++. .||.. ++..+
T Consensus 202 ~~~~~~~~~eEle~~~~ai~~~P~-d~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~--~pd~~w~l~~~ 278 (331)
T 3dss_A 202 GRLPENVLLKELELVQNAFFTDPN-DQSAWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKELQEL--EPENKWCLLTI 278 (331)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHH--CTTCHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhh--CcccchHHHHH
Confidence 4578899999888876533 777777555555444 4688999999999976 45542 22222
Q ss_pred ---HHHHhhchhHHHHHHHHHHhhhc
Q 021791 267 ---YRGLIQSDMLRTWRRLKKKLDEE 289 (307)
Q Consensus 267 ---~~~~~~~g~~~~a~~~~~~~~~~ 289 (307)
..+....|..+++...+.++.+.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (331)
T 3dss_A 279 ILLMRALDPLLYEKETLQYFSTLKAV 304 (331)
T ss_dssp HHHHHHHCTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccccHHHHHHHHHHHHHh
Confidence 22333467778888888888654
No 152
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.73 E-value=1.1e-06 Score=57.98 Aligned_cols=95 Identities=15% Similarity=0.072 Sum_probs=44.9
Q ss_pred hHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHH
Q 021791 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMF 200 (307)
Q Consensus 121 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~ 200 (307)
.+..+...+...|++++|...+++....... +...+..+...+...|++++|...+++..... +.+...+..+..++
T Consensus 6 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 6 ELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLK--PDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhC--cccHHHHHHHHHHH
Confidence 3444444555555555555555555443221 34444444444455555555555555444442 23344444444444
Q ss_pred HhcCcHHHHHHHHHHHhh
Q 021791 201 MALNRMDMVREIWNHVKG 218 (307)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~ 218 (307)
...|++++|.+.++....
T Consensus 83 ~~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 83 EFLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHTTCHHHHHHHHHHHHT
T ss_pred HHHhhHHHHHHHHHHHHH
Confidence 445555555554444444
No 153
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.71 E-value=6.5e-07 Score=60.31 Aligned_cols=18 Identities=17% Similarity=0.043 Sum_probs=6.8
Q ss_pred HHHhcCChHHHHHHHHHH
Q 021791 128 CLCSCGRIEDAEELLGEM 145 (307)
Q Consensus 128 ~~~~~~~~~~a~~~~~~~ 145 (307)
.+.+.|++++|...|++.
T Consensus 13 ~~~~~~~~~~A~~~~~~a 30 (126)
T 3upv_A 13 EYFTKSDWPNAVKAYTEM 30 (126)
T ss_dssp HHHHTTCHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHH
Confidence 333333333333333333
No 154
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.70 E-value=7.7e-07 Score=59.94 Aligned_cols=98 Identities=16% Similarity=0.080 Sum_probs=85.2
Q ss_pred HhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHH
Q 021791 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIH 233 (307)
Q Consensus 154 ~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~ 233 (307)
...+..+...+.+.|++++|...|++..... +.+...|..+..++...|++++|...++....... .+...|..+..
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~lg~ 80 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRA--PEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDP-NFVRAYIRKAT 80 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-CcHHHHHHHHH
Confidence 4566777888899999999999999998876 66788999999999999999999999999888753 36788899999
Q ss_pred HHHccCcHHHHHHHHHHHHHc
Q 021791 234 GLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 234 ~~~~~g~~~~a~~~~~~~~~~ 254 (307)
++...|++++|...|++.++.
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~ 101 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTK 101 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHh
Confidence 999999999999999998865
No 155
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.70 E-value=6.7e-07 Score=63.41 Aligned_cols=100 Identities=10% Similarity=-0.003 Sum_probs=78.3
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHH
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~ 162 (307)
+...+..+...+...|++++|++.|++..+.... +...|..+..+|.+.|++++|+..|++....... +...|..+..
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~ 87 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGL 87 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHH
Confidence 4566777778888888888888888888776533 6777888888888888888888888888776543 5777888888
Q ss_pred HHhcCCChhHHHHHHHHHhhcC
Q 021791 163 EYRGRKDANGAMKLYRQMKEDD 184 (307)
Q Consensus 163 ~~~~~~~~~~a~~~~~~~~~~~ 184 (307)
+|...|++++|...|++..+..
T Consensus 88 ~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 88 ARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHhC
Confidence 8888888888888888877664
No 156
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.69 E-value=1.3e-06 Score=61.91 Aligned_cols=97 Identities=14% Similarity=0.039 Sum_probs=52.2
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHH
Q 021791 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG 234 (307)
Q Consensus 155 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~ 234 (307)
..+..+...+...|++++|...|++..... +.+...|..+..++...|++++|+..++........ +...|..+..+
T Consensus 12 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~ 88 (164)
T 3sz7_A 12 DKLKSEGNAAMARKEYSKAIDLYTQALSIA--PANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLA 88 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHH
Confidence 344444555555555555555555555543 334555555555555555555555555555554321 44555555555
Q ss_pred HHccCcHHHHHHHHHHHHHc
Q 021791 235 LCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 235 ~~~~g~~~~a~~~~~~~~~~ 254 (307)
|...|++++|...|++.++.
T Consensus 89 ~~~~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 89 RFDMADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHh
Confidence 55666666666666655543
No 157
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.69 E-value=2.1e-06 Score=58.59 Aligned_cols=99 Identities=9% Similarity=-0.043 Sum_probs=58.9
Q ss_pred CHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHH
Q 021791 153 SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLI 232 (307)
Q Consensus 153 ~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li 232 (307)
+...+..+...+...|++++|...|....... +.+...+..+...+...|++++|...++....... .+...+..+.
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~l~ 84 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRN--PLVAVYYTNRALCYLKMQQPEQALADCRRALELDG-QSVKAHFFLG 84 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC--cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc-hhHHHHHHHH
Confidence 34455555555666666666666666655553 34455666666666666666666666666655432 2455666666
Q ss_pred HHHHccCcHHHHHHHHHHHHHc
Q 021791 233 HGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 233 ~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
.++...|++++|...|++.++.
T Consensus 85 ~~~~~~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 85 QCQLEMESYDEAIANLQRAYSL 106 (137)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHH
Confidence 6666666666666666666543
No 158
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.69 E-value=7.1e-07 Score=61.63 Aligned_cols=96 Identities=7% Similarity=-0.125 Sum_probs=58.5
Q ss_pred hHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHH
Q 021791 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGL 235 (307)
Q Consensus 156 ~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~ 235 (307)
.+..+...+.+.|++++|...|+...... +.+...|..+..++...|++++|...++....... -+...+..+..+|
T Consensus 20 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~ 96 (142)
T 2xcb_A 20 QLYALGFNQYQAGKWDDAQKIFQALCMLD--HYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI-NEPRFPFHAAECH 96 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHhC--CccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC-CCcHHHHHHHHHH
Confidence 34444555666666666666666666554 44556666666666666666666666666665532 2455566666666
Q ss_pred HccCcHHHHHHHHHHHHHc
Q 021791 236 CEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 236 ~~~g~~~~a~~~~~~~~~~ 254 (307)
...|++++|...|++.++.
T Consensus 97 ~~~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 97 LQLGDLDGAESGFYSARAL 115 (142)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHh
Confidence 6666666666666666544
No 159
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.68 E-value=6.2e-05 Score=59.35 Aligned_cols=241 Identities=10% Similarity=0.009 Sum_probs=167.5
Q ss_pred HHHHHHHHHH---HhcCchh-hHHHHHHHHHhcCCCC-cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcC
Q 021791 5 KMYTSLIYGW---CKINRID-MAERFLGEMIERGVEP-NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRG 79 (307)
Q Consensus 5 ~~~~~li~~~---~~~g~~~-~a~~~~~~~~~~~~~p-~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 79 (307)
..|..+...+ .+.|.+. +|+++++.+... .| +...|+.--..+...+...........+++++.+++.+....
T Consensus 27 ~~y~~~~~~~~~~~~~~e~s~eaL~~t~~~L~~--nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~ 104 (331)
T 3dss_A 27 KLYQSATQAVFQKRQAGELDESVLELTSQILGA--NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVN 104 (331)
T ss_dssp HHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHTT--CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--CchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhC
Confidence 3455544443 3556655 899999999886 44 445566655555442110000011233789999999998874
Q ss_pred CCCCHHHHHHHHHHHHhcCC--chhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCC-hHHHHHHHHHHHhCCCCCCHhh
Q 021791 80 IEPDVTSFSIVLHVYSRAHK--PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR-IEDAEELLGEMVRNGVSPSAET 156 (307)
Q Consensus 80 ~~~~~~~~~~ll~~~~~~~~--~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~~a~~~~~~~~~~~~~~~~~~ 156 (307)
+-+..+|+.-...+...++ +++++.++..+.+.... +..+|+.-...+...|. ++++++.++.+.+.++. |...
T Consensus 105 -PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~-N~SA 181 (331)
T 3dss_A 105 -PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS-NYSS 181 (331)
T ss_dssp -TTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSC-CHHH
T ss_pred -CCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCC-CHHH
Confidence 4488889888888888884 78999999999998755 88888888888888888 58999999999988765 7777
Q ss_pred HHHHHHHHhcC--------------CChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhc-----------CcHHHHHH
Q 021791 157 YNCFFKEYRGR--------------KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL-----------NRMDMVRE 211 (307)
Q Consensus 157 ~~~l~~~~~~~--------------~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~a~~ 211 (307)
|+.....+.+. +.++++++.+....... |-|..+|+-+--.+.+. +.++++++
T Consensus 182 W~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~--P~d~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~ 259 (331)
T 3dss_A 182 WHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTD--PNDQSAWFYHRWLLGAGSGRCELSVEKSTVLQSELE 259 (331)
T ss_dssp HHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHhccCccccchHHHHHHHHHHH
Confidence 77665555443 44778999999988876 67888887665555554 45789999
Q ss_pred HHHHHhhCCCCCCH-HhHHHHH---HHHHccCcHHHHHHHHHHHHHc
Q 021791 212 IWNHVKGSELGLDL-DSYTMLI---HGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 212 ~~~~~~~~~~~~~~-~~~~~li---~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
.++++.+.. |+. ..+-.++ ......|..+++...+.++++-
T Consensus 260 ~~~elle~~--pd~~w~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (331)
T 3dss_A 260 SCKELQELE--PENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAV 304 (331)
T ss_dssp HHHHHHHHC--TTCHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHhhC--cccchHHHHHHHHHHhhcccccHHHHHHHHHHHHHh
Confidence 999988763 443 2222222 1222457778888899988865
No 160
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.67 E-value=5.3e-07 Score=58.98 Aligned_cols=11 Identities=27% Similarity=-0.260 Sum_probs=4.0
Q ss_pred CcHHHHHHHHH
Q 021791 239 QKWKEACQYFV 249 (307)
Q Consensus 239 g~~~~a~~~~~ 249 (307)
|++++|.+.++
T Consensus 91 ~~~~~A~~~~~ 101 (112)
T 2kck_A 91 GKEVEAEIAEA 101 (112)
T ss_dssp SCSHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 33333333333
No 161
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.67 E-value=4.9e-07 Score=62.46 Aligned_cols=97 Identities=10% Similarity=-0.083 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHH
Q 021791 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164 (307)
Q Consensus 85 ~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (307)
..+..+...+.+.|++++|...|+........ +...|..+..+|...|++++|...|++....+.. +...+..+..++
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~ 96 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDIN-EPRFPFHAAECH 96 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHHHHH
Confidence 34555666667777777777777777665432 5666666777777777777777777777665433 455666666677
Q ss_pred hcCCChhHHHHHHHHHhhc
Q 021791 165 RGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 165 ~~~~~~~~a~~~~~~~~~~ 183 (307)
...|++++|...|+.....
T Consensus 97 ~~~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 97 LQLGDLDGAESGFYSARAL 115 (142)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHh
Confidence 7777777777777766654
No 162
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.65 E-value=1e-06 Score=60.23 Aligned_cols=99 Identities=8% Similarity=-0.102 Sum_probs=55.4
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHH
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~ 162 (307)
+...+..+...+...|++++|...|+...+.... +...+..+..++...|++++|...+++....... +...+..+..
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~ 85 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQ 85 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch-hHHHHHHHHH
Confidence 4455555555666666666666666655554322 4455555556666666666666666655554322 4455555555
Q ss_pred HHhcCCChhHHHHHHHHHhhc
Q 021791 163 EYRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 163 ~~~~~~~~~~a~~~~~~~~~~ 183 (307)
++...|++++|...|++....
T Consensus 86 ~~~~~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 86 CQLEMESYDEAIANLQRAYSL 106 (137)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHH
Confidence 555566666666555555443
No 163
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.65 E-value=6.6e-07 Score=60.36 Aligned_cols=108 Identities=15% Similarity=0.199 Sum_probs=61.2
Q ss_pred hHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCC--CCC----HHhHH
Q 021791 156 TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL--GLD----LDSYT 229 (307)
Q Consensus 156 ~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~--~~~----~~~~~ 229 (307)
.+..+...+...|++++|...+.+..... +.+...+..+...+...|++++|...++.+..... .++ ..++.
T Consensus 6 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (131)
T 1elr_A 6 KEKELGNDAYKKKDFDTALKHYDKAKELD--PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA 83 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcC--CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHH
Confidence 44445555556666666666666655543 34455556666666666666666666665554321 111 45566
Q ss_pred HHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHH
Q 021791 230 MLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLY 267 (307)
Q Consensus 230 ~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~ 267 (307)
.+..++...|++++|...|++..+. .|+......+.
T Consensus 84 ~la~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~l~ 119 (131)
T 1elr_A 84 RIGNSYFKEEKYKDAIHFYNKSLAE--HRTPDVLKKCQ 119 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH--CCCHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHh--CCCHHHHHHHH
Confidence 6666667777777777777776654 24444443333
No 164
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.64 E-value=1e-06 Score=59.60 Aligned_cols=93 Identities=15% Similarity=0.118 Sum_probs=43.3
Q ss_pred HHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCC--CCC----HHhHHHHH
Q 021791 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL--GLD----LDSYTMLI 232 (307)
Q Consensus 159 ~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~--~~~----~~~~~~li 232 (307)
.+...+.+.|++++|+..|++..+.. +.+...|..+..+|...|++++|++.++...+... .++ ..+|..+.
T Consensus 13 ~lG~~~~~~~~~~~A~~~y~~Al~~~--p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg 90 (127)
T 4gcn_A 13 DLGNAAYKQKDFEKAHVHYDKAIELD--PSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAG 90 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHH
Confidence 34444444444444444444444433 33344444444455555555555554444433210 001 12344455
Q ss_pred HHHHccCcHHHHHHHHHHHHH
Q 021791 233 HGLCEKQKWKEACQYFVEMIE 253 (307)
Q Consensus 233 ~~~~~~g~~~~a~~~~~~~~~ 253 (307)
.++...|++++|+..|++.+.
T Consensus 91 ~~~~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 91 NAFQKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHh
Confidence 555556666666666666554
No 165
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.64 E-value=1e-06 Score=59.60 Aligned_cols=96 Identities=7% Similarity=0.040 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCC--CC----HhhHHH
Q 021791 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS--PS----AETYNC 159 (307)
Q Consensus 86 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~--~~----~~~~~~ 159 (307)
.+..+...+.+.|++++|++.|++..+.... +...|..+..+|.+.|++++|+..+++..+.... ++ ..+|..
T Consensus 10 a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~ 88 (127)
T 4gcn_A 10 AEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSR 88 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHH
Confidence 3444555555666666666666655554322 4455555555666666666666655555432110 00 123344
Q ss_pred HHHHHhcCCChhHHHHHHHHHhh
Q 021791 160 FFKEYRGRKDANGAMKLYRQMKE 182 (307)
Q Consensus 160 l~~~~~~~~~~~~a~~~~~~~~~ 182 (307)
+..++...|++++|+..|++...
T Consensus 89 lg~~~~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 89 AGNAFQKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHh
Confidence 44444555555555555554444
No 166
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.61 E-value=7.5e-07 Score=58.25 Aligned_cols=104 Identities=10% Similarity=0.004 Sum_probs=86.1
Q ss_pred ccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCC--cHhhHHH
Q 021791 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP--QKVTFET 265 (307)
Q Consensus 188 ~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p--~~~~~~~ 265 (307)
.+...+..+...+...|++++|...++...... +.+...+..+..++...|++++|...+++..+.. +. +...+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~ 81 (112)
T 2kck_A 4 QNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLD-PEESKYWLMKGKALYNLERYEEAVDCYNYVINVI-EDEYNKDVWAA 81 (112)
T ss_dssp SSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS-CCTTCHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhC-cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-cccchHHHHHH
Confidence 345667778888889999999999999888764 2367788889999999999999999999998763 23 5778888
Q ss_pred HHHHHhhc-hhHHHHHHHHHHhhhcCCCC
Q 021791 266 LYRGLIQS-DMLRTWRRLKKKLDEESITF 293 (307)
Q Consensus 266 l~~~~~~~-g~~~~a~~~~~~~~~~~~~~ 293 (307)
+...+... |++++|.+.+++..+.....
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 82 KADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 99999999 99999999999997766543
No 167
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.60 E-value=8.7e-07 Score=59.76 Aligned_cols=98 Identities=13% Similarity=0.120 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCC--CC----HhhHH
Q 021791 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS--PS----AETYN 158 (307)
Q Consensus 85 ~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~--~~----~~~~~ 158 (307)
..+..+...+...|++++|...++...+... .+...+..+...+...|++++|...+++....... ++ ..++.
T Consensus 5 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (131)
T 1elr_A 5 LKEKELGNDAYKKKDFDTALKHYDKAKELDP-TNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA 83 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHH
Confidence 3455566666666666666666666665532 24555666666666666666666666665543211 11 44455
Q ss_pred HHHHHHhcCCChhHHHHHHHHHhhc
Q 021791 159 CFFKEYRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 159 ~l~~~~~~~~~~~~a~~~~~~~~~~ 183 (307)
.+...+...|++++|...++.....
T Consensus 84 ~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 84 RIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHh
Confidence 5555555666666666666555554
No 168
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.60 E-value=5.5e-05 Score=63.61 Aligned_cols=263 Identities=8% Similarity=0.006 Sum_probs=161.8
Q ss_pred HHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhc-CC-CC
Q 021791 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR-GI-EP 82 (307)
Q Consensus 5 ~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~-~~ 82 (307)
.+|...+..+-. |+++.+..+|++.+.. .|+...|...+....+.++ ..+....+|+..... |. .+
T Consensus 16 ~vyer~l~~~P~-~~~e~~~~iferal~~--~ps~~LW~~Y~~f~~~~~~---------~~~~i~~~fe~al~~vg~d~~ 83 (493)
T 2uy1_A 16 AIMEHARRLYMS-KDYRSLESLFGRCLKK--SYNLDLWMLYIEYVRKVSQ---------KKFKLYEVYEFTLGQFENYWD 83 (493)
T ss_dssp HHHHHHHHHHHT-TCHHHHHHHHHHHSTT--CCCHHHHHHHHHHHHHHC-------------CTHHHHHHHHHHSTTCTT
T ss_pred HHHHHHHHHCCC-CCHHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHhCc---------hHHHHHHHHHHHHHHcCCCcc
Confidence 356666666655 8899999999999885 5799999999988777432 224456677766653 43 33
Q ss_pred CHHHHHHHHHHHH----hcCCchhHHHHHHHHHHcCCCCchhh-------------------------------------
Q 021791 83 DVTSFSIVLHVYS----RAHKPQLSLDKLNFMKEKGICPTVAT------------------------------------- 121 (307)
Q Consensus 83 ~~~~~~~ll~~~~----~~~~~~~a~~~~~~~~~~~~~~~~~~------------------------------------- 121 (307)
+...|...+..+. ..++.+.+.++|+.........-...
T Consensus 84 s~~iW~~Yi~f~~~~~~~~~~~~~vR~iy~rAL~~P~~~~~~lw~~Y~~fE~~~~~~~~~~~~~~~~~~y~~ar~~y~~~ 163 (493)
T 2uy1_A 84 SYGLYKEYIEEEGKIEDEQTRIEKIRNGYMRALQTPMGSLSELWKDFENFELELNKITGKKIVGDTLPIFQSSFQRYQQI 163 (493)
T ss_dssp CHHHHHHHHHHTSSCSSHHHHHHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHhccccHHHHHHHHhHHHHHHHHHHHHH
Confidence 6678888777654 24567778888888876421111111
Q ss_pred -----------HHHHHHHHHhc--CC-----hHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhc
Q 021791 122 -----------YTSVVKCLCSC--GR-----IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 122 -----------~~~ll~~~~~~--~~-----~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 183 (307)
|...+..-... +- .+.+..+|+++.... +.+...|...+..+.+.|+.++|..++++....
T Consensus 164 ~~~~~~~s~~~W~~y~~~E~~~~~~~~~~~~~~Rv~~~ye~al~~~-p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~ 242 (493)
T 2uy1_A 164 QPLIRGWSVKNAARLIDLEMENGMKLGGRPHESRMHFIHNYILDSF-YYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM 242 (493)
T ss_dssp HHHHHTCSHHHHHHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHhcCCccCcchhhHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC
Confidence 11111111110 00 234566777777653 335778888888888899999999999887765
Q ss_pred CCCCccH----------------------------------------HHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCC
Q 021791 184 DLCVPNI----------------------------------------HTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223 (307)
Q Consensus 184 ~~~~~~~----------------------------------------~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 223 (307)
. .+. .+|...+....+.++.+.|..+|+.. .. ...
T Consensus 243 -P--~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~-~~~ 317 (493)
T 2uy1_A 243 -S--DGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GN-EGV 317 (493)
T ss_dssp -C--CSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TT-SCC
T ss_pred -C--CcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hC-CCC
Confidence 2 111 12223333333456788888888888 32 123
Q ss_pred CHHhHHHHHHHHHc-cCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHh
Q 021791 224 DLDSYTMLIHGLCE-KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286 (307)
Q Consensus 224 ~~~~~~~li~~~~~-~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~ 286 (307)
+...|......-.. .++.+.|..+|+..++.- +-++..+...++-..+.|+.+.|+.++++.
T Consensus 318 ~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~-~~~~~~~~~yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 318 GPHVFIYCAFIEYYATGSRATPYNIFSSGLLKH-PDSTLLKEEFFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp CHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHS
T ss_pred ChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 44444332222222 236888999998888762 223344555666667788888888888876
No 169
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.59 E-value=2.8e-06 Score=58.70 Aligned_cols=98 Identities=7% Similarity=-0.068 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCc----hhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHH
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT----VATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYN 158 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 158 (307)
+...+..+...+...|++++|.+.|+...+.. |+ ...+..+..+|...|++++|...+++....... +...+.
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~ 103 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLD--ATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALY 103 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHc--ccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHH
Confidence 34455555555555666666666665555442 22 344555555555555555555555555543221 344444
Q ss_pred HHHHHHhcCCChhHHHHHHHHHhhc
Q 021791 159 CFFKEYRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 159 ~l~~~~~~~~~~~~a~~~~~~~~~~ 183 (307)
.+..++...|++++|...|++....
T Consensus 104 ~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 104 RRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 5555555555555555555555444
No 170
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.58 E-value=1.4e-05 Score=66.06 Aligned_cols=167 Identities=10% Similarity=0.006 Sum_probs=72.3
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHcC-CCCchh----hHHHHHHHHHhcCChHHHHHHHHHHHhC----CCCC-CHhh
Q 021791 87 FSIVLHVYSRAHKPQLSLDKLNFMKEKG-ICPTVA----TYTSVVKCLCSCGRIEDAEELLGEMVRN----GVSP-SAET 156 (307)
Q Consensus 87 ~~~ll~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~----~~~~ll~~~~~~~~~~~a~~~~~~~~~~----~~~~-~~~~ 156 (307)
+..+...|...|++++|.+.+..+.+.- ..++.. +.+.+-..+...|+.++|..+++..... +..+ -..+
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 137 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSL 137 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHH
Confidence 4445555555555555555555543321 011111 1122222233345555555555544321 1111 1234
Q ss_pred HHHHHHHHhcCCChhHHHHHHHHHhhcCC----CCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhC--CC-CC-C--HH
Q 021791 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDL----CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS--EL-GL-D--LD 226 (307)
Q Consensus 157 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~--~~-~~-~--~~ 226 (307)
+..+...|...|++++|..++.+....-. .+....++..++..|...|++++|..+++..... .. .| . ..
T Consensus 138 ~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 217 (434)
T 4b4t_Q 138 SIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAE 217 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHH
Confidence 44555555555555555555555433211 0011234455555555555555555555544321 00 11 0 12
Q ss_pred hHHHHHHHHHccCcHHHHHHHHHHHHH
Q 021791 227 SYTMLIHGLCEKQKWKEACQYFVEMIE 253 (307)
Q Consensus 227 ~~~~li~~~~~~g~~~~a~~~~~~~~~ 253 (307)
.+..+...+...|++++|...|.+..+
T Consensus 218 ~~~~~g~~~~~~~~y~~A~~~~~~a~~ 244 (434)
T 4b4t_Q 218 LDLMSGILHCEDKDYKTAFSYFFESFE 244 (434)
T ss_dssp HHHHHHHHTTSSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 233444444555555555555555443
No 171
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.58 E-value=3.8e-06 Score=57.98 Aligned_cols=98 Identities=13% Similarity=-0.006 Sum_probs=52.8
Q ss_pred chhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCC----HhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHH
Q 021791 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS----AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTY 193 (307)
Q Consensus 118 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 193 (307)
+...+..+...+...|++++|...|++..+.. |+ ...+..+...|...|++++|...+++..... +.+...+
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~ 102 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLD--ATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD--GGDVKAL 102 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT--SCCHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHc--ccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC--ccCHHHH
Confidence 34455555556666666666666666665542 23 3445555555555555555555555555443 3344455
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHhhC
Q 021791 194 NILIGMFMALNRMDMVREIWNHVKGS 219 (307)
Q Consensus 194 ~~l~~~~~~~~~~~~a~~~~~~~~~~ 219 (307)
..+..++...|++++|...++.....
T Consensus 103 ~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 103 YRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 55555555555555555555555443
No 172
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.53 E-value=1.8e-06 Score=57.71 Aligned_cols=90 Identities=7% Similarity=-0.040 Sum_probs=38.4
Q ss_pred HHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcC
Q 021791 125 VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN 204 (307)
Q Consensus 125 ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 204 (307)
+...+.+.|++++|...|++..+.... +...|..+..++...|++++|...|++..+.. +.+...+..+..++...|
T Consensus 23 ~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~--P~~~~~~~~la~~~~~~g 99 (121)
T 1hxi_A 23 EGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLD--PKDIAVHAALAVSHTNEH 99 (121)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcC
Confidence 333444444444444444444443221 33444444444444444444444444444432 233334444444444444
Q ss_pred cHHHHHHHHHHHh
Q 021791 205 RMDMVREIWNHVK 217 (307)
Q Consensus 205 ~~~~a~~~~~~~~ 217 (307)
++++|...++...
T Consensus 100 ~~~~A~~~~~~al 112 (121)
T 1hxi_A 100 NANAALASLRAWL 112 (121)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 4444444444443
No 173
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.52 E-value=1.6e-06 Score=58.03 Aligned_cols=91 Identities=8% Similarity=-0.061 Sum_probs=47.8
Q ss_pred HHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHcc
Q 021791 159 CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK 238 (307)
Q Consensus 159 ~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~ 238 (307)
.+...+.+.|++++|...+++..... +.+...|..+..++...|++++|+..+++....... +...+..+..++...
T Consensus 22 ~~g~~~~~~g~~~~A~~~~~~al~~~--P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 22 EEGLSMLKLANLAEAALAFEAVCQKE--PEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPK-DIAVHAALAVSHTNE 98 (121)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHc
Confidence 34444555555555555555555543 344555555555555555555555555555544321 344455555555555
Q ss_pred CcHHHHHHHHHHHH
Q 021791 239 QKWKEACQYFVEMI 252 (307)
Q Consensus 239 g~~~~a~~~~~~~~ 252 (307)
|++++|+..+++.+
T Consensus 99 g~~~~A~~~~~~al 112 (121)
T 1hxi_A 99 HNANAALASLRAWL 112 (121)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 55555555555554
No 174
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.49 E-value=6.8e-06 Score=67.89 Aligned_cols=197 Identities=6% Similarity=-0.076 Sum_probs=138.9
Q ss_pred HHHHHhcCchhhHHHHHHHHHhcCCCCc----------------HHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHH
Q 021791 11 IYGWCKINRIDMAERFLGEMIERGVEPN----------------VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDE 74 (307)
Q Consensus 11 i~~~~~~g~~~~a~~~~~~~~~~~~~p~----------------~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 74 (307)
...+.+.|++++|++.|..+.+...... ...+..+...|.. .|++++|.+.+..
T Consensus 11 a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~----------~~~~~~a~~~~~~ 80 (434)
T 4b4t_Q 11 ARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVT----------MGAKDKLREFIPH 80 (434)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHH----------CCCHHHHHHHHHH
Confidence 4567789999999999999987632211 1246778888988 8888999999887
Q ss_pred HHhcC-CCCCH----HHHHHHHHHHHhcCCchhHHHHHHHHHHc----CCCC-chhhHHHHHHHHHhcCChHHHHHHHHH
Q 021791 75 MRVRG-IEPDV----TSFSIVLHVYSRAHKPQLSLDKLNFMKEK----GICP-TVATYTSVVKCLCSCGRIEDAEELLGE 144 (307)
Q Consensus 75 ~~~~~-~~~~~----~~~~~ll~~~~~~~~~~~a~~~~~~~~~~----~~~~-~~~~~~~ll~~~~~~~~~~~a~~~~~~ 144 (307)
+...- -.++. .+.+.+-..+...|+.+.+.+++...... +..+ -..++..+...|...|++++|..++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~ 160 (434)
T 4b4t_Q 81 STEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALIND 160 (434)
T ss_dssp THHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHH
Confidence 76531 11222 22333444445678899999998877542 2222 355778899999999999999999998
Q ss_pred HHhC----CCCC-CHhhHHHHHHHHhcCCChhHHHHHHHHHhhcC--CCCc-c--HHHHHHHHHHHHhcCcHHHHHHHHH
Q 021791 145 MVRN----GVSP-SAETYNCFFKEYRGRKDANGAMKLYRQMKEDD--LCVP-N--IHTYNILIGMFMALNRMDMVREIWN 214 (307)
Q Consensus 145 ~~~~----~~~~-~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~--~~~~-~--~~~~~~l~~~~~~~~~~~~a~~~~~ 214 (307)
+... +..+ ...++..++..|...|++++|..++++..... ...| . ...+..+...+...|++++|...+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~ 240 (434)
T 4b4t_Q 161 LLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFF 240 (434)
T ss_dssp HHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHH
T ss_pred HHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 7653 1111 24578889999999999999999998876431 1012 1 3456667777788899999988776
Q ss_pred HHh
Q 021791 215 HVK 217 (307)
Q Consensus 215 ~~~ 217 (307)
...
T Consensus 241 ~a~ 243 (434)
T 4b4t_Q 241 ESF 243 (434)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 175
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.48 E-value=1.7e-06 Score=60.70 Aligned_cols=132 Identities=8% Similarity=-0.012 Sum_probs=56.7
Q ss_pred hHHHHHHHHHhcCChHHHHHHHHHHHhCCCC-CC----HhhHHHHHHHHhcCCChhHHHHHHHHHhhcCC----CCccHH
Q 021791 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVS-PS----AETYNCFFKEYRGRKDANGAMKLYRQMKEDDL----CVPNIH 191 (307)
Q Consensus 121 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~-~~----~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~----~~~~~~ 191 (307)
++..+...+...|++++|...+++....... ++ ..++..+...+...|++++|...+++...... ......
T Consensus 11 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 90 (164)
T 3ro3_A 11 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQ 90 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHH
Confidence 3444444455555555555555544332100 00 12344444455555555555555554433210 000123
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHhhC----CCCC-CHHhHHHHHHHHHccCcHHHHHHHHHHHH
Q 021791 192 TYNILIGMFMALNRMDMVREIWNHVKGS----ELGL-DLDSYTMLIHGLCEKQKWKEACQYFVEMI 252 (307)
Q Consensus 192 ~~~~l~~~~~~~~~~~~a~~~~~~~~~~----~~~~-~~~~~~~li~~~~~~g~~~~a~~~~~~~~ 252 (307)
++..+...+...|++++|.+.+++.... +..+ ....+..+...+...|++++|...+++..
T Consensus 91 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 156 (164)
T 3ro3_A 91 SCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHL 156 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 4444555555555555555555544321 1000 11234444444555555555555555443
No 176
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.47 E-value=4.1e-06 Score=69.89 Aligned_cols=131 Identities=10% Similarity=0.003 Sum_probs=82.7
Q ss_pred chhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCC--------------HhhHHHHHHHHhcCCChhHHHHHHHHHhhc
Q 021791 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS--------------AETYNCFFKEYRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 118 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~--------------~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 183 (307)
....+..+...+.+.|++++|...|++......... ...|..+..+|.+.|++++|+..+++....
T Consensus 267 ~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 346 (457)
T 1kt0_A 267 QAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGL 346 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 344566677777777888888888777776432211 456666667777777777777777777666
Q ss_pred CCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHH-HHHHH
Q 021791 184 DLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQ-YFVEM 251 (307)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~-~~~~~ 251 (307)
. +.+...|..+..+|...|++++|...|+.+.+.... +...+..+..++...++.+++.. .+..|
T Consensus 347 ~--p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~-~~~a~~~l~~~~~~~~~~~~a~~~~~~~~ 412 (457)
T 1kt0_A 347 D--SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQ-NKAARLQISMCQKKAKEHNERDRRIYANM 412 (457)
T ss_dssp S--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-----CHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred C--CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 456666777777777777777777777777665322 44556666666666666655543 34444
No 177
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.45 E-value=1.6e-06 Score=72.75 Aligned_cols=119 Identities=12% Similarity=0.046 Sum_probs=76.8
Q ss_pred HHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcH
Q 021791 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241 (307)
Q Consensus 162 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~ 241 (307)
..+.+.|++++|...+++..+.. +.+..++..+..++.+.|++++|.+.+++..+... -+...+..+..+|...|++
T Consensus 14 ~~~~~~g~~~~A~~~~~~Al~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p-~~~~~~~~lg~~~~~~g~~ 90 (477)
T 1wao_1 14 NDYFKAKDYENAIKFYSQAIELN--PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDK-KYIKGYYRRAASNMALGKF 90 (477)
T ss_dssp SSTTTTTCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCT-TCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHhCCHHHHHHHHHHHHHhC--CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCH
Confidence 34556677777777777776664 45567777777777777777777777777776642 2566777777777777888
Q ss_pred HHHHHHHHHHHHcCCCCcHhhHHHHHHH--HhhchhHHHHHHHHH
Q 021791 242 KEACQYFVEMIEKGLLPQKVTFETLYRG--LIQSDMLRTWRRLKK 284 (307)
Q Consensus 242 ~~a~~~~~~~~~~~~~p~~~~~~~l~~~--~~~~g~~~~a~~~~~ 284 (307)
++|...|++.++.. +-+...+..+..+ +.+.|++++|.+.++
T Consensus 91 ~eA~~~~~~al~~~-p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 91 RAALRDYETVVKVK-PHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHHHHHHHHHHS-TTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 88888877777652 1123344444444 667777777777776
No 178
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.45 E-value=4.6e-06 Score=69.57 Aligned_cols=133 Identities=8% Similarity=-0.055 Sum_probs=108.4
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCc--------------hhhHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPT--------------VATYTSVVKCLCSCGRIEDAEELLGEMVRN 148 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~--------------~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~ 148 (307)
....+..+...+.+.|++++|...|++..+...... ...|..+..+|.+.|++++|+..+++....
T Consensus 267 ~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 346 (457)
T 1kt0_A 267 QAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGL 346 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 355778888999999999999999999987643211 578999999999999999999999999987
Q ss_pred CCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHH-HHHHHhh
Q 021791 149 GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVRE-IWNHVKG 218 (307)
Q Consensus 149 ~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~-~~~~~~~ 218 (307)
... +...|..+..+|...|++++|...|++..+.. +.+...+..+..++.+.++.+++.+ .+..|..
T Consensus 347 ~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~--P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f~ 414 (457)
T 1kt0_A 347 DSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVN--PQNKAARLQISMCQKKAKEHNERDRRIYANMFK 414 (457)
T ss_dssp STT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC------CHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 544 78889999999999999999999999999875 5677888899999999998887764 4555543
No 179
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.45 E-value=2.6e-06 Score=59.71 Aligned_cols=136 Identities=11% Similarity=-0.042 Sum_probs=102.7
Q ss_pred HhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCcc----HHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCC-CC----
Q 021791 154 AETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN----IHTYNILIGMFMALNRMDMVREIWNHVKGSELG-LD---- 224 (307)
Q Consensus 154 ~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~-~~---- 224 (307)
..++..+...+...|++++|...+++........++ ..++..+...+...|++++|.+.++........ .+
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 346777888899999999999999988764210111 247788899999999999999999887653111 11
Q ss_pred HHhHHHHHHHHHccCcHHHHHHHHHHHHHc----CCCC-cHhhHHHHHHHHhhchhHHHHHHHHHHhhhc
Q 021791 225 LDSYTMLIHGLCEKQKWKEACQYFVEMIEK----GLLP-QKVTFETLYRGLIQSDMLRTWRRLKKKLDEE 289 (307)
Q Consensus 225 ~~~~~~li~~~~~~g~~~~a~~~~~~~~~~----~~~p-~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~ 289 (307)
...+..+...+...|++++|...+++..+. +..+ ...++..+...+...|++++|.+.+++..+.
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 158 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI 158 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 446778888999999999999999988754 2111 1346777888899999999999999887543
No 180
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.44 E-value=8.8e-06 Score=54.76 Aligned_cols=92 Identities=11% Similarity=0.017 Sum_probs=49.6
Q ss_pred HHHHHhcCCChhHHHHHHHHHhhcCCCCccH---HHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCC---HHhHHHHHH
Q 021791 160 FFKEYRGRKDANGAMKLYRQMKEDDLCVPNI---HTYNILIGMFMALNRMDMVREIWNHVKGSELGLD---LDSYTMLIH 233 (307)
Q Consensus 160 l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~li~ 233 (307)
+...+...|++++|...|+...... +.+. ..+..+..++...|++++|...++.+...... + ...+..+..
T Consensus 8 ~a~~~~~~~~~~~A~~~~~~~~~~~--p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~ 84 (129)
T 2xev_A 8 VAFDALKNGKYDDASQLFLSFLELY--PNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGL 84 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC--SSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHC--CCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHH
Confidence 3344555555555555555555442 1222 34555555566666666666666655554211 2 344555556
Q ss_pred HHHccCcHHHHHHHHHHHHHc
Q 021791 234 GLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 234 ~~~~~g~~~~a~~~~~~~~~~ 254 (307)
++...|++++|...|+++++.
T Consensus 85 ~~~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 85 SQYGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHH
Confidence 666666666666666666654
No 181
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.44 E-value=8.8e-07 Score=74.29 Aligned_cols=117 Identities=15% Similarity=0.043 Sum_probs=55.0
Q ss_pred HHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHH
Q 021791 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDM 208 (307)
Q Consensus 129 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 208 (307)
+.+.|++++|.+.|++..+.... +...+..+..+|.+.|++++|...+++..+.. +.+..++..+..+|...|++++
T Consensus 16 ~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~--p~~~~~~~~lg~~~~~~g~~~e 92 (477)
T 1wao_1 16 YFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELD--KKYIKGYYRRAASNMALGKFRA 92 (477)
T ss_dssp TTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC--TTCHHHHHHHHHHHHHHTCHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHH
Confidence 34445555555555555544222 34455555555555555555555555555543 3344555555555555555555
Q ss_pred HHHHHHHHhhCCCCCCHHhHHHHHHH--HHccCcHHHHHHHHH
Q 021791 209 VREIWNHVKGSELGLDLDSYTMLIHG--LCEKQKWKEACQYFV 249 (307)
Q Consensus 209 a~~~~~~~~~~~~~~~~~~~~~li~~--~~~~g~~~~a~~~~~ 249 (307)
|.+.+++..+.... +...+..+..+ +.+.|++++|++.++
T Consensus 93 A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 93 ALRDYETVVKVKPH-DKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHHHHHHHHSTT-CTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 55555555443211 22233333333 445555555555555
No 182
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.44 E-value=8.3e-06 Score=65.97 Aligned_cols=122 Identities=7% Similarity=-0.036 Sum_probs=92.9
Q ss_pred hHHHHHHHHhcCCChhHHHHHHHHHhh----------------cCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhC
Q 021791 156 TYNCFFKEYRGRKDANGAMKLYRQMKE----------------DDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219 (307)
Q Consensus 156 ~~~~l~~~~~~~~~~~~a~~~~~~~~~----------------~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 219 (307)
.+..+...+.+.|++++|...|++..+ .. +.+..+|..+..+|.+.|++++|++.+++..+.
T Consensus 225 ~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~--~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 225 DLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQ--PVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGH--HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHH--HHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 345556666677777777777766654 22 345678888999999999999999999999886
Q ss_pred CCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHH
Q 021791 220 ELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRR 281 (307)
Q Consensus 220 ~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~ 281 (307)
.. -+...|..+..+|...|++++|+..|++.++.. +-+...+..+...+...++.+++.+
T Consensus 303 ~p-~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~-P~~~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 303 DP-SNTKALYRRAQGWQGLKEYDQALADLKKAQEIA-PEDKAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp CT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Cc-hhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 367888899999999999999999999998763 2355667777777777787776654
No 183
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.44 E-value=1.8e-05 Score=53.23 Aligned_cols=92 Identities=12% Similarity=-0.054 Sum_probs=49.5
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHcCCCCch---hhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCC---HhhHHHHHHH
Q 021791 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTV---ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS---AETYNCFFKE 163 (307)
Q Consensus 90 ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~---~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~l~~~ 163 (307)
+...+...|++++|...|+...+.... +. ..+..+..++...|++++|...|+++...... + ...+..+..+
T Consensus 8 ~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~ 85 (129)
T 2xev_A 8 VAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLS 85 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHH
Confidence 344555566666666666665554221 22 34555555566666666666666665554322 2 3445555555
Q ss_pred HhcCCChhHHHHHHHHHhhc
Q 021791 164 YRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 164 ~~~~~~~~~a~~~~~~~~~~ 183 (307)
+...|++++|...|+.+...
T Consensus 86 ~~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 86 QYGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHH
Confidence 55666666666666655554
No 184
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.42 E-value=6.8e-07 Score=59.43 Aligned_cols=84 Identities=10% Similarity=0.007 Sum_probs=34.8
Q ss_pred CCchhHHHHHHHHHHcC--CCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHH
Q 021791 98 HKPQLSLDKLNFMKEKG--ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175 (307)
Q Consensus 98 ~~~~~a~~~~~~~~~~~--~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ 175 (307)
|++++|+..|++..+.+ -+.+...+..+..+|...|++++|...|++..+..+. +...+..+..++...|++++|..
T Consensus 4 g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~ 82 (117)
T 3k9i_A 4 GLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVE 82 (117)
T ss_dssp ---CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHH
Confidence 44444444444444432 1112333444444444444444444444444443222 33444444444444444444444
Q ss_pred HHHHHhh
Q 021791 176 LYRQMKE 182 (307)
Q Consensus 176 ~~~~~~~ 182 (307)
.+++...
T Consensus 83 ~~~~al~ 89 (117)
T 3k9i_A 83 LLLKIIA 89 (117)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 185
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.41 E-value=5.4e-06 Score=67.07 Aligned_cols=97 Identities=9% Similarity=0.075 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHcC---------------CCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCC
Q 021791 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKG---------------ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150 (307)
Q Consensus 86 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~~---------------~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~ 150 (307)
.+..+...+.+.|++++|++.|++..+.- .+.+..+|..+..+|.+.|++++|+..+++..+...
T Consensus 225 ~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p 304 (370)
T 1ihg_A 225 DLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDP 304 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCc
Confidence 46667777888888888888887776520 011233344444444444444444444444444322
Q ss_pred CCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhc
Q 021791 151 SPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 151 ~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 183 (307)
. +...+..+..+|...|++++|...|++..+.
T Consensus 305 ~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 305 S-NTKALYRRAQGWQGLKEYDQALADLKKAQEI 336 (370)
T ss_dssp T-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred h-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 1 3334444444444444444444444444443
No 186
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.36 E-value=2.3e-06 Score=56.82 Aligned_cols=87 Identities=10% Similarity=0.059 Sum_probs=49.8
Q ss_pred CCChhHHHHHHHHHhhcCCC-CccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHH
Q 021791 167 RKDANGAMKLYRQMKEDDLC-VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEAC 245 (307)
Q Consensus 167 ~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~ 245 (307)
.|++++|...|++..+.+.. +.+...+..+...+...|++++|...+++....... +...+..+..++...|++++|.
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHH
Confidence 45566666666666654200 234455666666666666666666666666655322 4556666666666666666666
Q ss_pred HHHHHHHHc
Q 021791 246 QYFVEMIEK 254 (307)
Q Consensus 246 ~~~~~~~~~ 254 (307)
..+++.+..
T Consensus 82 ~~~~~al~~ 90 (117)
T 3k9i_A 82 ELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 666666654
No 187
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.35 E-value=1.3e-05 Score=56.47 Aligned_cols=71 Identities=14% Similarity=0.117 Sum_probs=55.1
Q ss_pred ccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHh
Q 021791 188 PNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261 (307)
Q Consensus 188 ~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~ 261 (307)
.+...|..+..+|.+.|++++|+..++....... .+...|..+..+|...|++++|...|++.++. .|+..
T Consensus 61 ~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p-~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l--~p~~~ 131 (162)
T 3rkv_A 61 KNIPLYANMSQCYLNIGDLHEAEETSSEVLKREE-TNEKALFRRAKARIAAWKLDEAEEDLKLLLRN--HPAAA 131 (162)
T ss_dssp THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CGGGH
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCC-cchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc--CCCCH
Confidence 3456778888888888888888888888887642 36778888888888888888888888888865 45543
No 188
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.32 E-value=1.6e-05 Score=56.00 Aligned_cols=99 Identities=11% Similarity=0.096 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHhcCCchhHHHHHHHHHHc--------CC---------CCchhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 021791 84 VTSFSIVLHVYSRAHKPQLSLDKLNFMKEK--------GI---------CPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146 (307)
Q Consensus 84 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~--------~~---------~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~ 146 (307)
...+......+.+.|++++|+..|....+. .. +.+...|..+..+|.+.|++++|...+++..
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 445667777888889999998888887664 00 1123456666677777777777777777776
Q ss_pred hCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhc
Q 021791 147 RNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 147 ~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 183 (307)
..... +...|..+..+|...|++++|...|++....
T Consensus 91 ~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 91 KREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 65432 5566666777777777777777777776665
No 189
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.28 E-value=5.3e-06 Score=66.32 Aligned_cols=60 Identities=15% Similarity=-0.011 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHH
Q 021791 192 TYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252 (307)
Q Consensus 192 ~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~ 252 (307)
.|..+..++.+.|++++|+..++....... .+...|..+..+|...|++++|...|++.+
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p-~~~~a~~~lg~a~~~~g~~~~A~~~l~~al 291 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEE-KNPKALFRRGKAKAELGQMDSARDDFRKAQ 291 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHTTTCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 344444445555555555555554444321 134444445555555555555555555444
No 190
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.26 E-value=6.5e-06 Score=65.80 Aligned_cols=147 Identities=10% Similarity=-0.029 Sum_probs=77.3
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHh
Q 021791 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYR 165 (307)
Q Consensus 86 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (307)
.+..+...+.+.|++++|...|++..+.. |+... +...++.+++...+ ....|..+..+|.
T Consensus 181 ~~~~~g~~~~~~g~~~~A~~~y~~Al~~~--p~~~~-------~~~~~~~~~~~~~l----------~~~~~~nla~~~~ 241 (338)
T 2if4_A 181 RRKMDGNSLFKEEKLEEAMQQYEMAIAYM--GDDFM-------FQLYGKYQDMALAV----------KNPCHLNIAACLI 241 (338)
T ss_dssp HHHHHHHHTCSSSCCHHHHHHHHHHHHHS--CHHHH-------HTCCHHHHHHHHHH----------HTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHh--ccchh-------hhhcccHHHHHHHH----------HHHHHHHHHHHHH
Confidence 45556666777778888888777776652 23221 12222233322211 1136777888888
Q ss_pred cCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHH-HHccCcHHHH
Q 021791 166 GRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHG-LCEKQKWKEA 244 (307)
Q Consensus 166 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~-~~~~g~~~~a 244 (307)
+.|++++|...+++..... +.+...+..+..+|...|++++|...|+........ +...+..+... ....+..+++
T Consensus 242 ~~g~~~~A~~~~~~al~~~--p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~-~~~a~~~L~~l~~~~~~~~~~a 318 (338)
T 2if4_A 242 KLKRYDEAIGHCNIVLTEE--EKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPD-DKAIRRELRALAEQEKALYQKQ 318 (338)
T ss_dssp TTTCCHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------------------
T ss_pred HcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999998888775 567788888888999999999999999888765322 34445555444 2345667788
Q ss_pred HHHHHHHHHc
Q 021791 245 CQYFVEMIEK 254 (307)
Q Consensus 245 ~~~~~~~~~~ 254 (307)
...|.+|.+.
T Consensus 319 ~~~~~~~l~~ 328 (338)
T 2if4_A 319 KEMYKGIFKG 328 (338)
T ss_dssp ----------
T ss_pred HHHHHHhhCC
Confidence 8888888754
No 191
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.26 E-value=0.00029 Score=60.30 Aligned_cols=170 Identities=8% Similarity=-0.040 Sum_probs=133.9
Q ss_pred chhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCC----------hHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCC-
Q 021791 100 PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR----------IEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK- 168 (307)
Q Consensus 100 ~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~----------~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 168 (307)
.++|++.++.+...... +..+|+.--.++.+.|+ +++++..++.+.....+ +..+|+.-...+.+.+
T Consensus 45 ~eeal~~~~~~l~~nP~-~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~ 122 (567)
T 1dce_A 45 DESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPE 122 (567)
T ss_dssp SHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSS
T ss_pred CHHHHHHHHHHHHHCch-hHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccc
Confidence 46789999999887644 56677766666666666 89999999999988665 7888888888888888
Q ss_pred -ChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcC-cHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHcc--------
Q 021791 169 -DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN-RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK-------- 238 (307)
Q Consensus 169 -~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~-------- 238 (307)
++++++..++++.+.+ +-|..+|+.-...+.+.| .++++.+.++.+.+..+. +..+|+.....+.+.
T Consensus 123 ~~~~~el~~~~k~l~~d--~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~-n~saW~~r~~ll~~l~~~~~~~~ 199 (567)
T 1dce_A 123 PNWARELELCARFLEAD--ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS-NYSSWHYRSCLLPQLHPQPDSGP 199 (567)
T ss_dssp CCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCC-CHHHHHHHHHHHHHHSCCCCSSS
T ss_pred ccHHHHHHHHHHHHhhc--cccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCC-CccHHHHHHHHHHhhcccccccc
Confidence 6699999999999987 678899998888888888 899999999999887654 788888777666542
Q ss_pred ------CcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchh
Q 021791 239 ------QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDM 275 (307)
Q Consensus 239 ------g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~ 275 (307)
+.++++++.+.+.+... +-|...|..+-..+.+.+.
T Consensus 200 ~~~~~~~~~~eel~~~~~ai~~~-P~~~saW~y~~~ll~~~~~ 241 (567)
T 1dce_A 200 QGRLPENVLLKELELVQNAFFTD-PNDQSAWFYHRWLLGRAEP 241 (567)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHC-SSCSHHHHHHHHHHSCCCC
T ss_pred cccccHHHHHHHHHHHHHHHhhC-CCCccHHHHHHHHHhcCCC
Confidence 66899999999998763 2345566666666666554
No 192
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.24 E-value=1.5e-05 Score=66.70 Aligned_cols=127 Identities=10% Similarity=-0.019 Sum_probs=96.1
Q ss_pred HHhcCCChhHHHHHHHHHhhcCC--C----CccHHHHHHHHHHHHhcCcHHHHHHHHHHHhh-----CCC-CCC-HHhHH
Q 021791 163 EYRGRKDANGAMKLYRQMKEDDL--C----VPNIHTYNILIGMFMALNRMDMVREIWNHVKG-----SEL-GLD-LDSYT 229 (307)
Q Consensus 163 ~~~~~~~~~~a~~~~~~~~~~~~--~----~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~-----~~~-~~~-~~~~~ 229 (307)
.+...|++++|..++++...... . +....+++.|..+|...|++++|+.++++... .|. .|+ ..+++
T Consensus 318 ~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~ 397 (490)
T 3n71_A 318 KARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVM 397 (490)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 35688999999999988765311 1 12356789999999999999999999988664 121 222 34689
Q ss_pred HHHHHHHccCcHHHHHHHHHHHHHc-----CC-CCcH-hhHHHHHHHHhhchhHHHHHHHHHHhhhc
Q 021791 230 MLIHGLCEKQKWKEACQYFVEMIEK-----GL-LPQK-VTFETLYRGLIQSDMLRTWRRLKKKLDEE 289 (307)
Q Consensus 230 ~li~~~~~~g~~~~a~~~~~~~~~~-----~~-~p~~-~~~~~l~~~~~~~g~~~~a~~~~~~~~~~ 289 (307)
.|...|...|++++|..++++.++- |- .|+. .+...+-.++...|.+++|+.+++++++.
T Consensus 398 nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 398 RAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988653 31 2332 34566667888999999999999998763
No 193
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.22 E-value=0.00029 Score=60.34 Aligned_cols=186 Identities=5% Similarity=-0.046 Sum_probs=140.4
Q ss_pred hcCc-hhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 021791 16 KINR-IDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVY 94 (307)
Q Consensus 16 ~~g~-~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~ 94 (307)
+.|. .++|++.++++...+.. +...|+.--.++...++-.........++++++.++.+.+.. +-+..+|+.-..++
T Consensus 40 ~~~~~~eeal~~~~~~l~~nP~-~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~-pK~y~aW~hR~w~l 117 (567)
T 1dce_A 40 QAGELDESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVN-PKSYGTWHHRCWLL 117 (567)
T ss_dssp HTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHCch-hHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhC-CCCHHHHHHHHHHH
Confidence 3444 46889999999987322 556777776666663221111112233899999999999875 34788899888888
Q ss_pred HhcC--CchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcC-ChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcC----
Q 021791 95 SRAH--KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG-RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR---- 167 (307)
Q Consensus 95 ~~~~--~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---- 167 (307)
.+.+ +++++++.++.+.+.... +..+|+.-...+.+.| .++++.+.++++.+.++. +...|+.....+.+.
T Consensus 118 ~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~-n~saW~~r~~ll~~l~~~~ 195 (567)
T 1dce_A 118 SRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS-NYSSWHYRSCLLPQLHPQP 195 (567)
T ss_dssp HTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCC-CHHHHHHHHHHHHHHSCCC
T ss_pred HHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCC-CccHHHHHHHHHHhhcccc
Confidence 9999 669999999999998765 8888988888888888 899999999999887665 778887766665542
Q ss_pred ----------CChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHH
Q 021791 168 ----------KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMD 207 (307)
Q Consensus 168 ----------~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 207 (307)
+.++++++.+.+..... +-|...|.-+-..+.+.++.+
T Consensus 196 ~~~~~~~~~~~~~~eel~~~~~ai~~~--P~~~saW~y~~~ll~~~~~~~ 243 (567)
T 1dce_A 196 DSGPQGRLPENVLLKELELVQNAFFTD--PNDQSAWFYHRWLLGRAEPHD 243 (567)
T ss_dssp CSSSCCSSCHHHHHHHHHHHHHHHHHC--SSCSHHHHHHHHHHSCCCCCS
T ss_pred cccccccccHHHHHHHHHHHHHHHhhC--CCCccHHHHHHHHHhcCCCcc
Confidence 45688999998888775 677888888877777766633
No 194
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.19 E-value=4.4e-05 Score=52.98 Aligned_cols=28 Identities=11% Similarity=-0.024 Sum_probs=17.1
Q ss_pred hHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 021791 121 TYTSVVKCLCSCGRIEDAEELLGEMVRN 148 (307)
Q Consensus 121 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~ 148 (307)
.+......+.+.|++++|...|++..+.
T Consensus 13 ~~~~~G~~l~~~g~~eeAi~~Y~kAL~l 40 (159)
T 2hr2_A 13 LALSDAQRQLVAGEYDEAAANCRRAMEI 40 (159)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhh
Confidence 3444555566666666666666666654
No 195
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.16 E-value=0.00018 Score=49.11 Aligned_cols=112 Identities=10% Similarity=-0.035 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHh----cCChHH
Q 021791 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCS----CGRIED 137 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~~~~ 137 (307)
.+++++|.++|++..+.| .|+.. |...|...+..++|.+.|++..+.| +...+..+...|.. .+++++
T Consensus 8 ~~d~~~A~~~~~~aa~~g-~~~a~----lg~~y~~g~~~~~A~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d~~~ 79 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELN-EMFGC----LSLVSNSQINKQKLFQYLSKACELN---SGNGCRFLGDFYENGKYVKKDLRK 79 (138)
T ss_dssp HHHHHHHHHHHHHHHHTT-CTTHH----HHHHTCTTSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHH
T ss_pred ccCHHHHHHHHHHHHcCC-CHhhh----HHHHHHcCCCHHHHHHHHHHHHcCC---CHHHHHHHHHHHHcCCCCCccHHH
Confidence 678888999998888887 33433 6666666677778888888887774 66677777777877 778888
Q ss_pred HHHHHHHHHhCCCCCCHhhHHHHHHHHhc----CCChhHHHHHHHHHhhcC
Q 021791 138 AEELLGEMVRNGVSPSAETYNCFFKEYRG----RKDANGAMKLYRQMKEDD 184 (307)
Q Consensus 138 a~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~a~~~~~~~~~~~ 184 (307)
|...|++..+.| +...+..+...|.. .+++++|...|++..+.+
T Consensus 80 A~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 80 AAQYYSKACGLN---DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp HHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCC---CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 888888887764 56667777777777 778888888888777765
No 196
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.14 E-value=4e-05 Score=50.41 Aligned_cols=80 Identities=10% Similarity=-0.034 Sum_probs=53.8
Q ss_pred HHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHH
Q 021791 172 GAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEM 251 (307)
Q Consensus 172 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~ 251 (307)
.+...|++..+.. +.+...+..+...+...|++++|...++....... .+...|..+..+|...|++++|...|++.
T Consensus 3 ~a~~~~~~al~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~la~~~~~~g~~~~A~~~~~~a 79 (115)
T 2kat_A 3 AITERLEAMLAQG--TDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDP-TYSVAWKWLGKTLQGQGDRAGARQAWESG 79 (115)
T ss_dssp CHHHHHHHHHTTT--CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC--CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4556666666554 45566777777777777777777777777766532 24566777777777777777777777776
Q ss_pred HHc
Q 021791 252 IEK 254 (307)
Q Consensus 252 ~~~ 254 (307)
++.
T Consensus 80 l~~ 82 (115)
T 2kat_A 80 LAA 82 (115)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
No 197
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.12 E-value=2.3e-05 Score=65.50 Aligned_cols=126 Identities=10% Similarity=-0.077 Sum_probs=94.8
Q ss_pred HHhcCChHHHHHHHHHHHhC-----CC-CC-CHhhHHHHHHHHhcCCChhHHHHHHHHHhhc-----CCCCc-cHHHHHH
Q 021791 129 LCSCGRIEDAEELLGEMVRN-----GV-SP-SAETYNCFFKEYRGRKDANGAMKLYRQMKED-----DLCVP-NIHTYNI 195 (307)
Q Consensus 129 ~~~~~~~~~a~~~~~~~~~~-----~~-~~-~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~-~~~~~~~ 195 (307)
+...|++++|+.++++..+. |. .| ...+++.|...|...|++++|..++++.... |...| ...+++.
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~n 398 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMR 398 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 55789999999999887753 11 12 2457899999999999999999998886542 21123 3567899
Q ss_pred HHHHHHhcCcHHHHHHHHHHHhh-----CCCC-CC-HHhHHHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 196 LIGMFMALNRMDMVREIWNHVKG-----SELG-LD-LDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 196 l~~~~~~~~~~~~a~~~~~~~~~-----~~~~-~~-~~~~~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
|...|...|++++|+.++++... .|.. |+ ..+.+.+-.++...+.+++|..++.++++.
T Consensus 399 La~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 399 AGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987664 2221 22 334566777888899999999999998764
No 198
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.08 E-value=6.8e-05 Score=52.04 Aligned_cols=100 Identities=14% Similarity=-0.021 Sum_probs=73.5
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCc-----cH-----HHHHHHHHHHHhcCcHHHHHHHHHHHhhC-----
Q 021791 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP-----NI-----HTYNILIGMFMALNRMDMVREIWNHVKGS----- 219 (307)
Q Consensus 155 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~-----~~~~~l~~~~~~~~~~~~a~~~~~~~~~~----- 219 (307)
..+......+.+.|++++|...|++..+.....| +. ..|..+..++.+.|++++|+..++.....
T Consensus 12 ~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~ 91 (159)
T 2hr2_A 12 YLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRG 91 (159)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccc
Confidence 3445566677888999999999998887642101 22 37888888888889998888888888764
Q ss_pred CCCC-CHHhH----HHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 220 ELGL-DLDSY----TMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 220 ~~~~-~~~~~----~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
.+.| +...| .....++...|++++|+..|++.++.
T Consensus 92 e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel 131 (159)
T 2hr2_A 92 ELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEM 131 (159)
T ss_dssp CTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 1133 44567 77888888888888888888888764
No 199
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.07 E-value=0.00037 Score=47.53 Aligned_cols=110 Identities=10% Similarity=0.040 Sum_probs=62.7
Q ss_pred ChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHh----cCcHHHH
Q 021791 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA----LNRMDMV 209 (307)
Q Consensus 134 ~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~a 209 (307)
++++|...|++..+.|. |+.. +...|...+..++|...|++..+.+ +...+..|...|.. .++.++|
T Consensus 10 d~~~A~~~~~~aa~~g~-~~a~----lg~~y~~g~~~~~A~~~~~~Aa~~g----~~~a~~~Lg~~y~~G~g~~~d~~~A 80 (138)
T 1klx_A 10 DLKKAIQYYVKACELNE-MFGC----LSLVSNSQINKQKLFQYLSKACELN----SGNGCRFLGDFYENGKYVKKDLRKA 80 (138)
T ss_dssp HHHHHHHHHHHHHHTTC-TTHH----HHHHTCTTSCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred CHHHHHHHHHHHHcCCC-Hhhh----HHHHHHcCCCHHHHHHHHHHHHcCC----CHHHHHHHHHHHHcCCCCCccHHHH
Confidence 45556666666555542 1222 4444555555555666666665543 34455555555555 5666666
Q ss_pred HHHHHHHhhCCCCCCHHhHHHHHHHHHc----cCcHHHHHHHHHHHHHcC
Q 021791 210 REIWNHVKGSELGLDLDSYTMLIHGLCE----KQKWKEACQYFVEMIEKG 255 (307)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~li~~~~~----~g~~~~a~~~~~~~~~~~ 255 (307)
.+.|+...+.| +...+..+...|.. .+++++|..+|++..+.|
T Consensus 81 ~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 81 AQYYSKACGLN---DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp HHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCC---CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 66666666553 45555666666655 566666766666666655
No 200
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.06 E-value=3.5e-05 Score=50.71 Aligned_cols=60 Identities=13% Similarity=0.114 Sum_probs=24.0
Q ss_pred hhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHH
Q 021791 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQM 180 (307)
Q Consensus 120 ~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~ 180 (307)
..+..+...|...|++++|...|++....... +...|..+..++...|++++|...|++.
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~a 79 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESG 79 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 33344444444444444444444444333211 2333333444444444444444444433
No 201
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.06 E-value=5.8e-06 Score=53.97 Aligned_cols=65 Identities=6% Similarity=0.007 Sum_probs=47.8
Q ss_pred cHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 189 NIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 189 ~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
+...+..+...+...|++++|.+.++....... .+...+..+..++...|++++|+..+++.++.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQP-QNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 455667777777778888888888877776532 25677777777888888888888888887754
No 202
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.98 E-value=0.00014 Score=45.27 Aligned_cols=23 Identities=17% Similarity=0.288 Sum_probs=8.8
Q ss_pred HHHHHHHhcCCChhHHHHHHHHH
Q 021791 158 NCFFKEYRGRKDANGAMKLYRQM 180 (307)
Q Consensus 158 ~~l~~~~~~~~~~~~a~~~~~~~ 180 (307)
..+...+...|++++|...+++.
T Consensus 47 ~~l~~~~~~~~~~~~A~~~~~~a 69 (91)
T 1na3_A 47 YNLGNAYYKQGDYDEAIEYYQKA 69 (91)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHH
Confidence 33333333333333333333333
No 203
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.97 E-value=4.1e-05 Score=49.80 Aligned_cols=60 Identities=10% Similarity=0.032 Sum_probs=23.4
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhh
Q 021791 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182 (307)
Q Consensus 122 ~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~ 182 (307)
+..+...+...|++++|...|++....... +...+..+..++...|++++|...+++...
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 66 (111)
T 2l6j_A 7 QKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLR 66 (111)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 333333444444444444444443333211 233333334444444444444444444433
No 204
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.87 E-value=0.00021 Score=44.34 Aligned_cols=80 Identities=11% Similarity=0.130 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHH
Q 021791 190 IHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRG 269 (307)
Q Consensus 190 ~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~ 269 (307)
...+..+...+...|++++|...++...... +.+...+..+..++...|++++|...+++..+.. +.+...+..+..+
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-p~~~~~~~~l~~~ 86 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCHHHHHHHHHH
Confidence 4455555566666666666666666655542 1245555666666666666666666666666542 2233444444444
Q ss_pred Hh
Q 021791 270 LI 271 (307)
Q Consensus 270 ~~ 271 (307)
+.
T Consensus 87 ~~ 88 (91)
T 1na3_A 87 KQ 88 (91)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 205
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.83 E-value=0.00015 Score=46.31 Aligned_cols=66 Identities=11% Similarity=0.076 Sum_probs=44.2
Q ss_pred CccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHH
Q 021791 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253 (307)
Q Consensus 187 ~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~ 253 (307)
+.+...+..+...+...|++++|+..|+...+.... +...|..+..+|...|++++|...|++.++
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 69 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIE 69 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 345566667777777777777777777777665422 455667777777777777777777776654
No 206
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.81 E-value=9.4e-05 Score=47.30 Aligned_cols=60 Identities=15% Similarity=0.048 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHH
Q 021791 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145 (307)
Q Consensus 85 ~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~ 145 (307)
..+..+..++...|++++|+..|+...+.... +...|..+..+|...|++++|...|++.
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~a 67 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQG 67 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 33444444444444444444444444443221 3334444444444444444444444443
No 207
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.80 E-value=8.6e-05 Score=51.42 Aligned_cols=94 Identities=6% Similarity=0.080 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCc----------HHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHcc-
Q 021791 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR----------MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK- 238 (307)
Q Consensus 170 ~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~- 238 (307)
+++|...++...+.. +.+...|..+..++...++ +++|+..|++..+.+.. +..+|..+-.+|...
T Consensus 18 feeA~~~~~~Ai~l~--P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg 94 (158)
T 1zu2_A 18 FEQIRQDAENTYKSN--PLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFA 94 (158)
T ss_dssp HHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhc
Confidence 344444444444443 3344444444444444333 33555555555554322 444555555555544
Q ss_pred ----------CcHHHHHHHHHHHHHcCCCCcHhhHHHHHH
Q 021791 239 ----------QKWKEACQYFVEMIEKGLLPQKVTFETLYR 268 (307)
Q Consensus 239 ----------g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~ 268 (307)
|++++|+..|++.++. .|+...|...+.
T Consensus 95 ~l~P~~~~a~g~~~eA~~~~~kAl~l--~P~~~~y~~al~ 132 (158)
T 1zu2_A 95 FLTPDETEAKHNFDLATQFFQQAVDE--QPDNTHYLKSLE 132 (158)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHHHH--CTTCHHHHHHHH
T ss_pred ccCcchhhhhccHHHHHHHHHHHHHh--CCCCHHHHHHHH
Confidence 4778888888887764 566555544443
No 208
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.77 E-value=9.3e-05 Score=51.26 Aligned_cols=95 Identities=7% Similarity=0.056 Sum_probs=52.5
Q ss_pred ChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCC----------hhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhc
Q 021791 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKD----------ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMAL 203 (307)
Q Consensus 134 ~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 203 (307)
.+++|...++...+.... +...|..+..++...++ +++|+..|++..+.+ +.+..+|..+..+|...
T Consensus 17 ~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ld--P~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 17 LFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID--PKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp HHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhC--cCcHHHHHHHHHHHHHh
Confidence 344444444444443322 34444444444443333 346666666666664 44556666666666655
Q ss_pred -----------CcHHHHHHHHHHHhhCCCCCCHHhHHHHHH
Q 021791 204 -----------NRMDMVREIWNHVKGSELGLDLDSYTMLIH 233 (307)
Q Consensus 204 -----------~~~~~a~~~~~~~~~~~~~~~~~~~~~li~ 233 (307)
|++++|.+.|++..+. .|+...|...+.
T Consensus 94 g~l~P~~~~a~g~~~eA~~~~~kAl~l--~P~~~~y~~al~ 132 (158)
T 1zu2_A 94 AFLTPDETEAKHNFDLATQFFQQAVDE--QPDNTHYLKSLE 132 (158)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHHHHHHH--CTTCHHHHHHHH
T ss_pred cccCcchhhhhccHHHHHHHHHHHHHh--CCCCHHHHHHHH
Confidence 4788888888888775 455555544443
No 209
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.70 E-value=0.0018 Score=51.41 Aligned_cols=76 Identities=16% Similarity=0.045 Sum_probs=62.5
Q ss_pred CccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHH
Q 021791 187 VPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETL 266 (307)
Q Consensus 187 ~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l 266 (307)
+.+..++..+...+...|++++|...++++...+ |+...|..+-..+.-.|++++|.+.|++.... .|...||...
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln--~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL--~P~~~t~~~~ 349 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE--MSWLNYVLLGKVYEMKGMNREAADAYLTAFNL--RPGANTLYWI 349 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--SCSHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--CCCcChHHHH
Confidence 6678888888777777899999999999999875 68777777788888999999999999998875 5777776543
No 210
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.69 E-value=0.0046 Score=49.17 Aligned_cols=140 Identities=10% Similarity=0.014 Sum_probs=73.8
Q ss_pred CCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHHHh---cC-Cc-hhHHH---
Q 021791 35 VEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPD-VTSFSIVLHVYSR---AH-KP-QLSLD--- 105 (307)
Q Consensus 35 ~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~ll~~~~~---~~-~~-~~a~~--- 105 (307)
.+.+...|...+++........ .....+|..+|++..+. .|+ ...|..+.-++.. .+ .. .....
T Consensus 190 ~p~~~~Aydl~Lra~~~l~~~~-----~~~~~~A~~l~e~Al~l--DP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~ 262 (372)
T 3ly7_A 190 LPHRGALLTNFYQAHDYLLHGD-----DKSLNRASELLGEIVQS--SPEFTYARAEKALVDIVRHSQHPLDEKQLAALNT 262 (372)
T ss_dssp SCSSGGGHHHHHHHHHHHHHCS-----HHHHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCC-----HHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHH
Confidence 3556777888777665432211 56678888899888877 343 3444444444331 11 00 01111
Q ss_pred HHHHHHH-cCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhc
Q 021791 106 KLNFMKE-KGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 106 ~~~~~~~-~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 183 (307)
.+..... ...+.+..+|..+...+...|++++|...+++....+ |+...|..+...+.-.|++++|.+.+++....
T Consensus 263 a~~a~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln--~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 263 EIDNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE--MSWLNYVLLGKVYEMKGMNREAADAYLTAFNL 339 (372)
T ss_dssp HHHHHHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 1111100 1113355555555555555566666666666666553 45555555555566666666666666666555
No 211
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.23 E-value=0.0027 Score=40.00 Aligned_cols=57 Identities=14% Similarity=0.249 Sum_probs=36.1
Q ss_pred HHHHHhcCcHHHHHHHHHHHhhCCCCCCHH-hHHHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 197 IGMFMALNRMDMVREIWNHVKGSELGLDLD-SYTMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
...+...|++++|...++...+... .+.. .+..+..+|...|++++|...|++.++.
T Consensus 7 a~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 7 IKELINQGDIENALQALEEFLQTEP-VGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCS-STHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCC-CcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 3455566677777777766665432 2445 6666666667777777777777776654
No 212
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.19 E-value=0.0018 Score=53.33 Aligned_cols=88 Identities=8% Similarity=0.032 Sum_probs=60.3
Q ss_pred cCCChhHHHHHHHHHhhcC--CCC---c-cHHHHHHHHHHHHhcCcHHHHHHHHHHHhh-----CC-CCCC-HHhHHHHH
Q 021791 166 GRKDANGAMKLYRQMKEDD--LCV---P-NIHTYNILIGMFMALNRMDMVREIWNHVKG-----SE-LGLD-LDSYTMLI 232 (307)
Q Consensus 166 ~~~~~~~a~~~~~~~~~~~--~~~---~-~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~-----~~-~~~~-~~~~~~li 232 (307)
..|++++|..++++..... ... | ...+++.|..+|...|++++|+.++++... .| -.|+ ..+++.|.
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 4567788888887765421 111 2 246678888888888888888888877653 12 1222 34578888
Q ss_pred HHHHccCcHHHHHHHHHHHHH
Q 021791 233 HGLCEKQKWKEACQYFVEMIE 253 (307)
Q Consensus 233 ~~~~~~g~~~~a~~~~~~~~~ 253 (307)
..|...|++++|..++++.++
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhccCHHHHHHHHHHHHH
Confidence 888888888888888887754
No 213
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.18 E-value=0.0016 Score=41.11 Aligned_cols=25 Identities=12% Similarity=0.077 Sum_probs=9.6
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHH
Q 021791 122 YTSVVKCLCSCGRIEDAEELLGEMV 146 (307)
Q Consensus 122 ~~~ll~~~~~~~~~~~a~~~~~~~~ 146 (307)
+..+..+|...|++++|...|++..
T Consensus 38 ~~~lg~~~~~~~~~~~A~~~~~~al 62 (99)
T 2kc7_A 38 YYLMGNAYRKLGDWQKALNNYQSAI 62 (99)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3333333333333333333333333
No 214
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.17 E-value=0.0023 Score=52.67 Aligned_cols=93 Identities=3% Similarity=-0.064 Sum_probs=71.1
Q ss_pred HHHHhcCCChhHHHHHHHHHhhcC--CCCc----cHHHHHHHHHHHHhcCcHHHHHHHHHHHhh-----CC-CCCC-HHh
Q 021791 161 FKEYRGRKDANGAMKLYRQMKEDD--LCVP----NIHTYNILIGMFMALNRMDMVREIWNHVKG-----SE-LGLD-LDS 227 (307)
Q Consensus 161 ~~~~~~~~~~~~a~~~~~~~~~~~--~~~~----~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~-----~~-~~~~-~~~ 227 (307)
+..+.+.|++++|..++++..... ...| ...+++.|..+|...|++++|+.++++... .| ..|+ ..+
T Consensus 294 ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~ 373 (429)
T 3qwp_A 294 IEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQ 373 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHH
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHH
Confidence 455667899999999999887542 1122 356788999999999999999999987664 12 1222 346
Q ss_pred HHHHHHHHHccCcHHHHHHHHHHHHH
Q 021791 228 YTMLIHGLCEKQKWKEACQYFVEMIE 253 (307)
Q Consensus 228 ~~~li~~~~~~g~~~~a~~~~~~~~~ 253 (307)
++.|...|...|++++|..++++.++
T Consensus 374 l~nLa~~~~~~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 374 VMKVGKLQLHQGMFPQAMKNLRLAFD 399 (429)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 88899999999999999999998865
No 215
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=97.12 E-value=0.026 Score=37.54 Aligned_cols=64 Identities=9% Similarity=-0.065 Sum_probs=30.0
Q ss_pred hHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhhcCC
Q 021791 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESI 291 (307)
Q Consensus 227 ~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~~ 291 (307)
.++..+..+..+|+-++..+++..+.. +.+|++.....+..+|.+.|+..++.+++.+..+.|+
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~-n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG~ 156 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILK-NNEVSASILVAIANALRRVGDERDATTLLIEACKKGE 156 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC---CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhc-cCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhhh
Confidence 344444444455555555555544322 2344444444455555555555555555555444443
No 216
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.09 E-value=0.023 Score=50.90 Aligned_cols=130 Identities=8% Similarity=0.083 Sum_probs=74.6
Q ss_pred HHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcC
Q 021791 88 SIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR 167 (307)
Q Consensus 88 ~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (307)
..++..+.+.|.++.|.++.+.- . .-.......|+++.|.++.+.+ .+...|..+...+.+.
T Consensus 633 ~~~~~~l~~~~~~~~a~~~~~~~-------~-----~~f~~~l~~~~~~~A~~~~~~~------~~~~~W~~la~~al~~ 694 (814)
T 3mkq_A 633 TKIARFLEGQEYYEEALNISPDQ-------D-----QKFELALKVGQLTLARDLLTDE------SAEMKWRALGDASLQR 694 (814)
T ss_dssp HHHHHHHHHTTCHHHHHHHCCCH-------H-----HHHHHHHHHTCHHHHHHHHTTC------CCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCChHHheecCCCc-------c-----hheehhhhcCCHHHHHHHHHhh------CcHhHHHHHHHHHHHc
Confidence 55555666666666665544211 0 1122345567777776664332 2566777777777777
Q ss_pred CChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHH
Q 021791 168 KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQY 247 (307)
Q Consensus 168 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~ 247 (307)
++++.|.+.|..+.. |..+...+...|+.+...++.+.....| -++....+|.+.|++++|+++
T Consensus 695 ~~~~~A~~~y~~~~d----------~~~l~~l~~~~~~~~~~~~~~~~a~~~~------~~~~A~~~~~~~g~~~~a~~~ 758 (814)
T 3mkq_A 695 FNFKLAIEAFTNAHD----------LESLFLLHSSFNNKEGLVTLAKDAETTG------KFNLAFNAYWIAGDIQGAKDL 758 (814)
T ss_dssp TCHHHHHHHHHHHTC----------HHHHHHHHHHTTCHHHHHHHHHHHHHTT------CHHHHHHHHHHHTCHHHHHHH
T ss_pred CCHHHHHHHHHHccC----------hhhhHHHHHHcCCHHHHHHHHHHHHHcC------chHHHHHHHHHcCCHHHHHHH
Confidence 777777777776643 2234444445666666666555555443 224444456667777777777
Q ss_pred HHHH
Q 021791 248 FVEM 251 (307)
Q Consensus 248 ~~~~ 251 (307)
+.++
T Consensus 759 ~~~~ 762 (814)
T 3mkq_A 759 LIKS 762 (814)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 7654
No 217
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.09 E-value=0.002 Score=52.97 Aligned_cols=88 Identities=10% Similarity=-0.011 Sum_probs=68.1
Q ss_pred hcCChHHHHHHHHHHHhC---CCCCC----HhhHHHHHHHHhcCCChhHHHHHHHHHhhc-----CCCCc-cHHHHHHHH
Q 021791 131 SCGRIEDAEELLGEMVRN---GVSPS----AETYNCFFKEYRGRKDANGAMKLYRQMKED-----DLCVP-NIHTYNILI 197 (307)
Q Consensus 131 ~~~~~~~a~~~~~~~~~~---~~~~~----~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~-~~~~~~~l~ 197 (307)
..|++++|+.++++..+. -+.|+ ..+++.+..+|...|++++|..++++.... |...| ...+++.|.
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 457889999999987653 11222 467899999999999999999999887642 21123 356789999
Q ss_pred HHHHhcCcHHHHHHHHHHHhh
Q 021791 198 GMFMALNRMDMVREIWNHVKG 218 (307)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~ 218 (307)
..|...|++++|+.++++..+
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhccCHHHHHHHHHHHHH
Confidence 999999999999999988764
No 218
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.08 E-value=0.011 Score=36.92 Aligned_cols=67 Identities=10% Similarity=0.115 Sum_probs=40.4
Q ss_pred CccHHHHHHHHHHHHhcCc---HHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 187 VPNIHTYNILIGMFMALNR---MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 187 ~~~~~~~~~l~~~~~~~~~---~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
+.|...+..+..++...++ .++|..++++....... +......+...+...|++++|+..|+++++.
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4455556666665544433 56666666666665422 5555666666666677777777777776654
No 219
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.03 E-value=0.003 Score=52.04 Aligned_cols=93 Identities=6% Similarity=-0.059 Sum_probs=69.1
Q ss_pred HHHHHHhcCchhhHHHHHHHHHhcC---CCC----cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhc----
Q 021791 10 LIYGWCKINRIDMAERFLGEMIERG---VEP----NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR---- 78 (307)
Q Consensus 10 li~~~~~~g~~~~a~~~~~~~~~~~---~~p----~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~---- 78 (307)
.+..+.+.|++++|++++++..+.. +.| ...+++.+..+|.. .|++++|+.++++..+.
T Consensus 293 ~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~----------~g~~~eA~~~~~~~L~i~~~~ 362 (429)
T 3qwp_A 293 KIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN----------LGLLEEALFYGTRTMEPYRIF 362 (429)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh----------hccHHHHHHHHHHHHHhHHHH
Confidence 4566778899999999999987641 222 34678889999998 77778888777776542
Q ss_pred -C-CCC-CHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Q 021791 79 -G-IEP-DVTSFSIVLHVYSRAHKPQLSLDKLNFMKE 112 (307)
Q Consensus 79 -~-~~~-~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~ 112 (307)
| ..| ...+++.|...|...|++++|..++++..+
T Consensus 363 lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 363 FPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFD 399 (429)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 2 222 345688899999999999999998887754
No 220
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.99 E-value=0.011 Score=36.94 Aligned_cols=66 Identities=11% Similarity=-0.046 Sum_probs=39.1
Q ss_pred CCHHHHHHHHHHHHhcCC---chhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 021791 82 PDVTSFSIVLHVYSRAHK---PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148 (307)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~---~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~ 148 (307)
.|...+..+..++...++ .++|..++++..+.... +......+...+.+.|++++|...|+++.+.
T Consensus 4 ~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 455555555555544333 46666666666665433 5555666666666666666666666666654
No 221
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.99 E-value=0.016 Score=51.91 Aligned_cols=45 Identities=11% Similarity=-0.028 Sum_probs=22.2
Q ss_pred HhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHH
Q 021791 95 SRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145 (307)
Q Consensus 95 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~ 145 (307)
...|+++.|.++.+.+ .+...|..+...+.+.++++.|++.|.++
T Consensus 663 l~~~~~~~A~~~~~~~------~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 663 LKVGQLTLARDLLTDE------SAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHTCHHHHHHHHTTC------CCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhcCCHHHHHHHHHhh------CcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 3445555555443221 14445555555555555555555555544
No 222
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=96.89 E-value=0.022 Score=43.62 Aligned_cols=97 Identities=10% Similarity=0.108 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC---HHHHHHHHHHHHhc-----CCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhc-
Q 021791 62 EKTIRNAEKVFDEMRVRGIEPD---VTSFSIVLHVYSRA-----HKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSC- 132 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~~~~---~~~~~~ll~~~~~~-----~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~- 132 (307)
.+....|...+++..+. .|+ -..|..+...|... |+.++|.+.|++..+.+..-+..++......++..
T Consensus 176 l~~l~~A~a~lerAleL--DP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~ 253 (301)
T 3u64_A 176 PDTVHAAVMMLERACDL--WPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPL 253 (301)
T ss_dssp HHHHHHHHHHHHHHHHH--CTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTT
T ss_pred HHhHHHHHHHHHHHHHh--CCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhc
Confidence 67778888888888876 444 45788888888884 88999999999888875433467777788888774
Q ss_pred CChHHHHHHHHHHHhCCCC--CCHhhHHHH
Q 021791 133 GRIEDAEELLGEMVRNGVS--PSAETYNCF 160 (307)
Q Consensus 133 ~~~~~a~~~~~~~~~~~~~--~~~~~~~~l 160 (307)
|+.+++.+.+++....... |+....+..
T Consensus 254 gd~~~a~~~L~kAL~a~p~~~P~~~lan~~ 283 (301)
T 3u64_A 254 NNRAGFDEALDRALAIDPESVPHNKLLVIL 283 (301)
T ss_dssp TCHHHHHHHHHHHHHCCGGGCSSCHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCChhHHHHH
Confidence 8889999999988887666 555444444
No 223
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.85 E-value=0.018 Score=39.48 Aligned_cols=87 Identities=13% Similarity=0.063 Sum_probs=61.6
Q ss_pred ChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcC---cHHHHHHHHHHHhhCCCCC--CHHhHHHHHHHHHccCcHHH
Q 021791 169 DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALN---RMDMVREIWNHVKGSELGL--DLDSYTMLIHGLCEKQKWKE 243 (307)
Q Consensus 169 ~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~a~~~~~~~~~~~~~~--~~~~~~~li~~~~~~g~~~~ 243 (307)
....+.+-|.+....+ +++..+...+..++++.+ +.++++.+++...+.. .| +...+-.+.-+|.+.|++++
T Consensus 13 ~l~~~~~~y~~e~~~~--~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-~p~~~rd~lY~LAv~~~kl~~Y~~ 89 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAG--SVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHTT--CCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHccC--CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-CccchHHHHHHHHHHHHHccCHHH
Confidence 3455666666666655 567777777888888877 6668888888887764 23 34455556667788888999
Q ss_pred HHHHHHHHHHcCCCCcH
Q 021791 244 ACQYFVEMIEKGLLPQK 260 (307)
Q Consensus 244 a~~~~~~~~~~~~~p~~ 260 (307)
|.+.++.+++. .|+.
T Consensus 90 A~~y~~~lL~i--eP~n 104 (152)
T 1pc2_A 90 ALKYVRGLLQT--EPQN 104 (152)
T ss_dssp HHHHHHHHHHH--CTTC
T ss_pred HHHHHHHHHhc--CCCC
Confidence 99988888865 5643
No 224
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=96.77 E-value=0.025 Score=36.08 Aligned_cols=66 Identities=8% Similarity=-0.079 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcC------CCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG------ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN 148 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~------~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~ 148 (307)
+...+..+...+.+.|++..|...|+...+.- ..+....+..+..++.+.|+++.|...+++..+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 44555566666777777777777766655431 1224455666666666666666666666666654
No 225
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=96.76 E-value=0.058 Score=35.90 Aligned_cols=137 Identities=7% Similarity=-0.015 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHH
Q 021791 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~ 141 (307)
.|.+++..++..+..... +..-+|-++--....-+=+-..++++.+-+. .|. ..+|++......
T Consensus 20 dG~v~qGveii~k~~~ss---ni~E~NW~ICNiiD~a~C~y~v~vLd~IGki---FDi----------s~C~NlKrVi~C 83 (172)
T 1wy6_A 20 DGYIDEGVKIVLEITKSS---TKSEYNWFICNLLESIDCRYMFQVLDKIGSY---FDL----------DKCQNLKSVVEC 83 (172)
T ss_dssp TTCHHHHHHHHHHHHHHS---CHHHHTHHHHHHHHHCCHHHHHHHHHHHGGG---SCG----------GGCSCTHHHHHH
T ss_pred hhhHHHHHHHHHHHcCCC---CccccceeeeecchhhchhHHHHHHHHHhhh---cCc----------HhhhcHHHHHHH
Confidence 345556666666655442 4444554444444444434344444333221 221 233444444444
Q ss_pred HHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCC
Q 021791 142 LGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221 (307)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~ 221 (307)
+-.+- .+...+...+......|..++..+++..+.... +|++.....+..+|.+.|+..++.+++.+..+.|+
T Consensus 84 ~~~~n-----~~se~vd~ALd~lv~~~KkDqLdki~~~~l~n~--~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG~ 156 (172)
T 1wy6_A 84 GVINN-----TLNEHVNKALDILVIQGKRDKLEEIGREILKNN--EVSASILVAIANALRRVGDERDATTLLIEACKKGE 156 (172)
T ss_dssp HHHTT-----CCCHHHHHHHHHHHHTTCHHHHHHHHHHHC--C--CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHhc-----chHHHHHHHHHHHHHhccHhHHHHHHHHHhccC--CCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhhh
Confidence 43321 244555666677777777777777777754433 66777777777788888888888777777777764
No 226
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=96.50 E-value=0.04 Score=35.12 Aligned_cols=66 Identities=12% Similarity=0.052 Sum_probs=39.3
Q ss_pred chhhHHHHHHHHHhcCChHHHHHHHHHHHhCC------CCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhc
Q 021791 118 TVATYTSVVKCLCSCGRIEDAEELLGEMVRNG------VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 118 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 183 (307)
+..-+..+...+...|+++.|...|+...+.. -.+....+..+..++.+.|+++.|...+++..+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 44445566677777777777777776665431 1123445556666666666666666666666554
No 227
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=96.48 E-value=0.034 Score=42.59 Aligned_cols=109 Identities=14% Similarity=0.111 Sum_probs=77.3
Q ss_pred hHHHHHHHHHhhcCCCCccHHHHHHHHHHHHh-----cCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHcc-CcHHHH
Q 021791 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMA-----LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEK-QKWKEA 244 (307)
Q Consensus 171 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~-g~~~~a 244 (307)
..|...+++..+.+.-..+-..|..+...|.+ .|+.++|.+.|++....+..-+..++....+.++.. |+.+++
T Consensus 180 ~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a 259 (301)
T 3u64_A 180 HAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGF 259 (301)
T ss_dssp HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHH
Confidence 56777777777764211246688889988988 499999999999999875432477888888888884 999999
Q ss_pred HHHHHHHHHcCCC--CcHhhHHHHHHHHhhchhHHHHHHHHHHhh
Q 021791 245 CQYFVEMIEKGLL--PQKVTFETLYRGLIQSDMLRTWRRLKKKLD 287 (307)
Q Consensus 245 ~~~~~~~~~~~~~--p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~ 287 (307)
...+++.++.... |+.. +...+.-++|..++.++.
T Consensus 260 ~~~L~kAL~a~p~~~P~~~--------lan~~~q~eA~~LL~~~~ 296 (301)
T 3u64_A 260 DEALDRALAIDPESVPHNK--------LLVILSQKRARWLKAHVQ 296 (301)
T ss_dssp HHHHHHHHHCCGGGCSSCH--------HHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHcCCCCCCCChh--------HHHHHHHHHHHHHHHHhH
Confidence 9999999987554 4422 233344456666665543
No 228
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=96.47 E-value=0.13 Score=36.24 Aligned_cols=131 Identities=13% Similarity=0.148 Sum_probs=96.4
Q ss_pred HHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCc
Q 021791 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR 205 (307)
Q Consensus 126 l~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 205 (307)
.......|+++.|.++.+.+ .+...|..+.......|+++-|.+.|...... ..+.-.|...|+
T Consensus 12 F~LAL~lg~l~~A~e~a~~l------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~----------~~L~~Ly~~tg~ 75 (177)
T 3mkq_B 12 FDLALEYGNLDAALDEAKKL------NDSITWERLIQEALAQGNASLAEMIYQTQHSF----------DKLSFLYLVTGD 75 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHH------CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCH----------HHHHHHHHHHTC
T ss_pred HHHHHhcCCHHHHHHHHHHh------CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCH----------HHHHHHHHHhCC
Confidence 34566789999999998765 47899999999999999999999999987643 345555667888
Q ss_pred HHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHH
Q 021791 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKK 285 (307)
Q Consensus 206 ~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~ 285 (307)
.+...++-+.....| -++.....+...|+++++.++|.+. |-.|.+.. .....|-.+.|.++.+.
T Consensus 76 ~e~L~kla~iA~~~g------~~n~af~~~l~lGdv~~~i~lL~~~---~r~~eA~~------~A~t~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 76 VNKLSKMQNIAQTRE------DFGSMLLNTFYNNSTKERSSIFAEG---GSLPLAYA------VAKANGDEAAASAFLEQ 140 (177)
T ss_dssp HHHHHHHHHHHHHTT------CHHHHHHHHHHHTCHHHHHHHHHHT---TCHHHHHH------HHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCc------cHHHHHHHHHHcCCHHHHHHHHHHC---CChHHHHH------HHHHcCcHHHHHHHHHH
Confidence 888887777666654 3455666677889999999998654 33332221 12335667888888887
Q ss_pred hh
Q 021791 286 LD 287 (307)
Q Consensus 286 ~~ 287 (307)
+.
T Consensus 141 ~~ 142 (177)
T 3mkq_B 141 AE 142 (177)
T ss_dssp TT
T ss_pred hC
Confidence 64
No 229
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.46 E-value=0.03 Score=38.35 Aligned_cols=83 Identities=12% Similarity=0.050 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC---CchhHHHHHHHHHHcCCCC--chhhHHHHHHHHHhcCChHH
Q 021791 63 KTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAH---KPQLSLDKLNFMKEKGICP--TVATYTSVVKCLCSCGRIED 137 (307)
Q Consensus 63 ~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~---~~~~a~~~~~~~~~~~~~~--~~~~~~~ll~~~~~~~~~~~ 137 (307)
..+..+.+-|.+..+.|. ++..+...+..++++.+ +.++++.+++...+.+ .| ....+-.+.-+|.+.|++++
T Consensus 12 ~~l~~~~~~y~~e~~~~~-~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-~p~~~rd~lY~LAv~~~kl~~Y~~ 89 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGS-VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHHTTC-CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHHccCC-CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-CccchHHHHHHHHHHHHHccCHHH
Confidence 334444444444433332 34444444444444444 2334444444444432 11 12222333333444444444
Q ss_pred HHHHHHHHHh
Q 021791 138 AEELLGEMVR 147 (307)
Q Consensus 138 a~~~~~~~~~ 147 (307)
|.+.++.+.+
T Consensus 90 A~~y~~~lL~ 99 (152)
T 1pc2_A 90 ALKYVRGLLQ 99 (152)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 4444444444
No 230
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.30 E-value=0.14 Score=34.83 Aligned_cols=53 Identities=2% Similarity=0.015 Sum_probs=29.1
Q ss_pred CChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCC
Q 021791 168 KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222 (307)
Q Consensus 168 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~ 222 (307)
++.++|.++|+.+.... +-=...|....+.-.+.|++..|.+++......+.+
T Consensus 74 ~D~d~aR~vy~~a~~~h--KkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k 126 (161)
T 4h7y_A 74 QEPDDARDYFQMARANC--KKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAV 126 (161)
T ss_dssp HCGGGCHHHHHHHHHHC--TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred cCHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCC
Confidence 45556666665554432 222555555555555666666666666666655443
No 231
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.25 E-value=0.15 Score=34.70 Aligned_cols=115 Identities=12% Similarity=0.081 Sum_probs=81.2
Q ss_pred CCCHHHHHHHHHHHHhcCCc------hhHHHHHHHHHHcCCCCchh-hHHHHHHH------HHhcCChHHHHHHHHHHHh
Q 021791 81 EPDVTSFSIVLHVYSRAHKP------QLSLDKLNFMKEKGICPTVA-TYTSVVKC------LCSCGRIEDAEELLGEMVR 147 (307)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~------~~a~~~~~~~~~~~~~~~~~-~~~~ll~~------~~~~~~~~~a~~~~~~~~~ 147 (307)
+-|..+|-..+...-+.|++ ++..++|++.... ++|+.. .|...+.. +...+++++|.++|+.+..
T Consensus 10 p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~-~Pp~k~~~wrrYI~LWIrYA~~~ei~D~d~aR~vy~~a~~ 88 (161)
T 4h7y_A 10 ANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEA-LPPDKYGQNESFARIQVRFAELKAIQEPDDARDYFQMARA 88 (161)
T ss_dssp CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHH-SCGGGGTTCHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHc-CCccccccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 34677888888888888888 7888888887765 445421 12222211 2345899999999999987
Q ss_pred CCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHH
Q 021791 148 NGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGM 199 (307)
Q Consensus 148 ~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~ 199 (307)
.+-. -...|....+.-.+.|+...|.+++......+ +-+...+...++-
T Consensus 89 ~hKk-FAKiwi~~AqFEiRqgnl~kARkILg~AiG~~--~k~~~~le~a~~n 137 (161)
T 4h7y_A 89 NCKK-FAFVHISFAQFELSQGNVKKSKQLLQKAVERG--AVPLEMLEIALRN 137 (161)
T ss_dssp HCTT-BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT--CBCHHHHHHHHHH
T ss_pred HhHH-HHHHHHHHHHHHHHcccHHHHHHHHHHHhccC--CCcHHHHHHHHHh
Confidence 6333 37788888888899999999999999999876 3444555554444
No 232
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=96.15 E-value=0.2 Score=35.25 Aligned_cols=130 Identities=10% Similarity=0.036 Sum_probs=92.1
Q ss_pred HHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCCh
Q 021791 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170 (307)
Q Consensus 91 l~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 170 (307)
.......|+++.|.++.+.+ .+...|..|.......|+++-|++.|.+..+ +..+.-.|...|+.
T Consensus 12 F~LAL~lg~l~~A~e~a~~l------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D---------~~~L~~Ly~~tg~~ 76 (177)
T 3mkq_B 12 FDLALEYGNLDAALDEAKKL------NDSITWERLIQEALAQGNASLAEMIYQTQHS---------FDKLSFLYLVTGDV 76 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHH------CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC---------HHHHHHHHHHHTCH
T ss_pred HHHHHhcCCHHHHHHHHHHh------CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC---------HHHHHHHHHHhCCH
Confidence 34456889999999987765 3788999999999999999999999988753 34455566778888
Q ss_pred hHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHH
Q 021791 171 NGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVE 250 (307)
Q Consensus 171 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~ 250 (307)
++...+-+.....+. ++.....+.-.|+++++.+++.+.... ..-.......|-.+.|.++.++
T Consensus 77 e~L~kla~iA~~~g~-------~n~af~~~l~lGdv~~~i~lL~~~~r~---------~eA~~~A~t~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 77 NKLSKMQNIAQTRED-------FGSMLLNTFYNNSTKERSSIFAEGGSL---------PLAYAVAKANGDEAAASAFLEQ 140 (177)
T ss_dssp HHHHHHHHHHHHTTC-------HHHHHHHHHHHTCHHHHHHHHHHTTCH---------HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCcc-------HHHHHHHHHHcCCHHHHHHHHHHCCCh---------HHHHHHHHHcCcHHHHHHHHHH
Confidence 887777666665542 344455566799999999998654431 1111112235667777777765
Q ss_pred H
Q 021791 251 M 251 (307)
Q Consensus 251 ~ 251 (307)
+
T Consensus 141 ~ 141 (177)
T 3mkq_B 141 A 141 (177)
T ss_dssp T
T ss_pred h
Confidence 5
No 233
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=95.66 E-value=0.25 Score=32.51 Aligned_cols=64 Identities=8% Similarity=-0.089 Sum_probs=27.1
Q ss_pred CHhhHHHHHHHHhcCCChhH---HHHHHHHHhhcCCCCc--cHHHHHHHHHHHHhcCcHHHHHHHHHHHhh
Q 021791 153 SAETYNCFFKEYRGRKDANG---AMKLYRQMKEDDLCVP--NIHTYNILIGMFMALNRMDMVREIWNHVKG 218 (307)
Q Consensus 153 ~~~~~~~l~~~~~~~~~~~~---a~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~ 218 (307)
+..+--.+..++.+..+... ++.+++.+.+.+ .| .....-.|.-++.+.|++++|.+.++.+.+
T Consensus 34 s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~--~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~ 102 (126)
T 1nzn_A 34 SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG--SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQ 102 (126)
T ss_dssp CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC--CcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34443344444444444433 444444444432 12 222233333444445555555555444444
No 234
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=95.61 E-value=0.11 Score=34.15 Aligned_cols=83 Identities=18% Similarity=0.132 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHH---HHHHHHHHHhCCCC-CCHhhHHHHHHHHhcCCChhHHHHH
Q 021791 101 QLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIED---AEELLGEMVRNGVS-PSAETYNCFFKEYRGRKDANGAMKL 176 (307)
Q Consensus 101 ~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~---a~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~a~~~ 176 (307)
..+.+-|......|. ++..+-..+..++.++++... ++.+++.+...+.+ -.....-.+.-++.+.|++++|.+.
T Consensus 18 ~~~~~~y~~e~~~~~-~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~ 96 (126)
T 1nzn_A 18 LKFEKKFQSEKAAGS-VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKY 96 (126)
T ss_dssp HHHHHHHHHHHHHSC-CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHhccCC-CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 344444544444443 466666666677777666555 66666666654311 1233444455567777777777777
Q ss_pred HHHHhhcC
Q 021791 177 YRQMKEDD 184 (307)
Q Consensus 177 ~~~~~~~~ 184 (307)
++.+.+..
T Consensus 97 ~~~lL~~e 104 (126)
T 1nzn_A 97 VRGLLQTE 104 (126)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 77777763
No 235
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.30 E-value=0.35 Score=39.19 Aligned_cols=73 Identities=12% Similarity=0.018 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHH-----cCCCCcHhhHHH
Q 021791 192 TYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE-----KGLLPQKVTFET 265 (307)
Q Consensus 192 ~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~-----~~~~p~~~~~~~ 265 (307)
+...++.++...|+.+++...+..+.... +.+...|..++.++.+.|+..+|++.|+++.+ .|+.|+..+-..
T Consensus 173 a~~~~~~~~l~~g~~~~a~~~l~~~~~~~-P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l 250 (388)
T 2ff4_A 173 AHTAKAEAEIACGRASAVIAELEALTFEH-PYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRAL 250 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 34556677778888888888877776653 44777888888888888888888888887654 288888776443
No 236
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.15 E-value=0.17 Score=44.62 Aligned_cols=130 Identities=13% Similarity=0.076 Sum_probs=83.9
Q ss_pred HHHHHHHHHHhcCC-chhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCC-hHHHHHHHHHHHhC------CCCC-CH--
Q 021791 86 SFSIVLHVYSRAHK-PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGR-IEDAEELLGEMVRN------GVSP-SA-- 154 (307)
Q Consensus 86 ~~~~ll~~~~~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~~a~~~~~~~~~~------~~~~-~~-- 154 (307)
....++..+...++ .+.|..+++++.......+......++..+...++ --+|.+++.+..+. ...+ +.
T Consensus 250 L~~~Ll~~~~~t~~~~~~a~~~le~L~~~~p~~~~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~ 329 (754)
T 4gns_B 250 LMYSLKSFIAITPSLVDFTIDYLKGLTKKDPIHDIYYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADS 329 (754)
T ss_dssp HHHHHHHHHHTCGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHH
T ss_pred HHHHHHHHHcccccHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhccccccc
Confidence 34556666666766 47899999999887432222222333443333332 23455555544321 1111 11
Q ss_pred --------hhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHh
Q 021791 155 --------ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217 (307)
Q Consensus 155 --------~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~ 217 (307)
.....-.+.+...|+++-|+.+-++..... +.+-.+|..|..+|...|+++.|+-.++.+.
T Consensus 330 ~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~a--PseF~tW~~La~vYi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 330 ARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELA--LDSFESWYNLARCHIKKEEYEKALFAINSMP 398 (754)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--SSCHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred ccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcC--chhhHHHHHHHHHHHHhccHHHHHHHHhcCC
Confidence 122222445678999999999999998875 6678899999999999999999999998874
No 237
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.07 E-value=0.25 Score=43.53 Aligned_cols=127 Identities=14% Similarity=0.137 Sum_probs=79.7
Q ss_pred HHHHHHHHhcCc-hhhHHHHHHHHHhcCCCCcHHHH--HHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhc------
Q 021791 8 TSLIYGWCKINR-IDMAERFLGEMIERGVEPNVVTY--NVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVR------ 78 (307)
Q Consensus 8 ~~li~~~~~~g~-~~~a~~~~~~~~~~~~~p~~~~~--~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------ 78 (307)
..++..+...|+ .+.|.++|+++.+. .|....+ ..++...... ...--+|.+++.+..+.
T Consensus 252 ~~Ll~~~~~t~~~~~~a~~~le~L~~~--~p~~~~~~~~~~i~~~~~~---------~~~Ev~av~ll~~~l~~~~~~~~ 320 (754)
T 4gns_B 252 YSLKSFIAITPSLVDFTIDYLKGLTKK--DPIHDIYYKTAMITILDHI---------ETKELDMITILNETLDPLLSLLN 320 (754)
T ss_dssp HHHHHHHHTCGGGHHHHHHHHHHHHHH--CGGGHHHHHHHHHHHHTTC---------GGGHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccccHHHHHHHHHHHHHhh--CCchhHHHHHHHHHHHHHh---------hhhhHHHHHHHHHHHHHhhhhhh
Confidence 345555656666 58899999999887 4433332 2233322221 11122344444443321
Q ss_pred CCC-CCH----------HHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHH
Q 021791 79 GIE-PDV----------TSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMV 146 (307)
Q Consensus 79 ~~~-~~~----------~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~ 146 (307)
..+ .+. ...+.=...+...|+++.|+++-++..... +.+-.+|..|..+|...|+++.|+-.++.+.
T Consensus 321 ~l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~a-PseF~tW~~La~vYi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 321 DLPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELA-LDSFESWYNLARCHIKKEEYEKALFAINSMP 398 (754)
T ss_dssp TCSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SSCHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred hhcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcC-chhhHHHHHHHHHHHHhccHHHHHHHHhcCC
Confidence 111 111 122222345677999999999999988874 3367899999999999999999999998874
No 238
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=94.60 E-value=2.5 Score=38.31 Aligned_cols=121 Identities=8% Similarity=0.066 Sum_probs=60.9
Q ss_pred HHHHhcCChHHHHHHHHHHHhCCCCCCHhhHH--HHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHH--HHHHHHHh
Q 021791 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYN--CFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYN--ILIGMFMA 202 (307)
Q Consensus 127 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~ 202 (307)
..+...|+.+....++..+.+.. +..... .+.-++...|+.+.+..+++.+.... .|....-. ++.-+|+.
T Consensus 498 li~vGTgn~~ai~~LL~~~~e~~---~e~vrR~aalgLGll~~g~~e~~~~li~~L~~~~--dp~vRygaa~alglAyaG 572 (963)
T 4ady_A 498 LCMLGTGKPEAIHDMFTYSQETQ---HGNITRGLAVGLALINYGRQELADDLITKMLASD--ESLLRYGGAFTIALAYAG 572 (963)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHCS---CHHHHHHHHHHHHHHTTTCGGGGHHHHHHHHHCS--CHHHHHHHHHHHHHHTTT
T ss_pred hhhcccCCHHHHHHHHHHHhccC---cHHHHHHHHHHHHhhhCCChHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHhcC
Confidence 33445667776677776665431 222222 22233446677777777777776543 23332222 33345556
Q ss_pred cCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHH
Q 021791 203 LNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIE 253 (307)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~ 253 (307)
.|+.....+++..+.... ..+......+.-++...|+.+.+.+++..+.+
T Consensus 573 TGn~~aIq~LL~~~~~d~-~d~VRraAViaLGlI~~g~~e~v~rlv~~L~~ 622 (963)
T 4ady_A 573 TGNNSAVKRLLHVAVSDS-NDDVRRAAVIALGFVLLRDYTTVPRIVQLLSK 622 (963)
T ss_dssp SCCHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTSSSCSSHHHHTTTGGG
T ss_pred CCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHhhccCCHHHHHHHHHHHHh
Confidence 677666666777666532 11222222222333344554445555554443
No 239
>1v54_E Cytochrome C oxidase polypeptide VA; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: a.118.11.1 PDB: 1oco_E* 1occ_E* 1ocz_E* 1ocr_E* 1v55_E* 2dyr_E* 2dys_E* 2eij_E* 2eik_E* 2eil_E* 2eim_E* 2ein_E* 2occ_E* 2ybb_P* 2zxw_E* 3abk_E* 3abl_E* 3abm_E* 3ag1_E* 3ag2_E* ...
Probab=94.45 E-value=0.5 Score=29.52 Aligned_cols=44 Identities=14% Similarity=0.292 Sum_probs=19.2
Q ss_pred HHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhh
Q 021791 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKE 182 (307)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~ 182 (307)
.+-++.+....+.|++....+.+++|.+.+++..|.++|+.+..
T Consensus 30 rrglN~l~~~DlVP~P~ii~aaLrAcRRvND~alAVR~lE~iK~ 73 (109)
T 1v54_E 30 RKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKD 73 (109)
T ss_dssp HHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 33333333344444444444444444444444444444444443
No 240
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=94.36 E-value=2.9 Score=37.94 Aligned_cols=182 Identities=14% Similarity=0.128 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHH--HHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHH
Q 021791 66 RNAEKVFDEMRVRGIEPDVTSFS--IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLG 143 (307)
Q Consensus 66 ~~a~~~~~~~~~~~~~~~~~~~~--~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~ 143 (307)
+++.+.+..+.... .+...... +|...+...|+.+....++..+.+.. .-+..-...+.-++.-.|+.+.+..+.+
T Consensus 471 eev~e~L~~~L~dd-~~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e~~-~e~vrR~aalgLGll~~g~~e~~~~li~ 548 (963)
T 4ady_A 471 IEVYEALKEVLYND-SATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQ-HGNITRGLAVGLALINYGRQELADDLIT 548 (963)
T ss_dssp HHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCGGGGHHHHH
T ss_pred HHHHHHHHHHHhcC-CHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhccC-cHHHHHHHHHHHHhhhCCChHHHHHHHH
Confidence 45556666655432 11111122 23334556677777777777766542 1122222333344457899999999998
Q ss_pred HHHhCCCCCCHhh--HHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCC
Q 021791 144 EMVRNGVSPSAET--YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSEL 221 (307)
Q Consensus 144 ~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~ 221 (307)
.+.... .|.... -..+.-+|+..|+.....+++..+.... ..+..-...+.-++...|+.+.+.++++.+.+.+
T Consensus 549 ~L~~~~-dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~~d~--~d~VRraAViaLGlI~~g~~e~v~rlv~~L~~~~- 624 (963)
T 4ady_A 549 KMLASD-ESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVSDS--NDDVRRAAVIALGFVLLRDYTTVPRIVQLLSKSH- 624 (963)
T ss_dssp HHHHCS-CHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHCS--CHHHHHHHHHHHHHHTSSSCSSHHHHTTTGGGCS-
T ss_pred HHHhCC-CHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhccCC--cHHHHHHHHHHHHhhccCCHHHHHHHHHHHHhcC-
Confidence 887641 122221 1234456888999888888999988764 3455544444445556777777788887776653
Q ss_pred CCCHHhHHHHHHHHHccCcH-HHHHHHHHHHHH
Q 021791 222 GLDLDSYTMLIHGLCEKQKW-KEACQYFVEMIE 253 (307)
Q Consensus 222 ~~~~~~~~~li~~~~~~g~~-~~a~~~~~~~~~ 253 (307)
.|....-..+.-+....|.. .+++.++..+..
T Consensus 625 d~~VR~gAalALGli~aGn~~~~aid~L~~L~~ 657 (963)
T 4ady_A 625 NAHVRCGTAFALGIACAGKGLQSAIDVLDPLTK 657 (963)
T ss_dssp CHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhccCCCcHHHHHHHHHHcc
Confidence 33443333344444444443 677888888864
No 241
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.18 E-value=0.32 Score=39.44 Aligned_cols=59 Identities=17% Similarity=0.228 Sum_probs=36.3
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHh
Q 021791 122 YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMK 181 (307)
Q Consensus 122 ~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~ 181 (307)
...++..+...|++++|...+..+....+ .+...+..+|.++.+.|+..+|++.|+.+.
T Consensus 174 ~~~~~~~~l~~g~~~~a~~~l~~~~~~~P-~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r 232 (388)
T 2ff4_A 174 HTAKAEAEIACGRASAVIAELEALTFEHP-YREPLWTQLITAYYLSDRQSDALGAYRRVK 232 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34455566666666666666666655432 355666666666666676666666666553
No 242
>2y69_E Cytochrome C oxidase subunit 5A; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=93.25 E-value=1.2 Score=29.61 Aligned_cols=46 Identities=13% Similarity=0.274 Sum_probs=25.4
Q ss_pred HHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhc
Q 021791 138 AEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 138 a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 183 (307)
..+-++.+...++.|++......+++|.+.+++..|.++|+-+..+
T Consensus 72 lrrglN~l~~~DlVPeP~Ii~AALrAcRRvNDfalAVR~lE~vK~K 117 (152)
T 2y69_E 72 LRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDK 117 (152)
T ss_dssp HHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 3344444444555555555555555555556665565555555544
No 243
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=92.58 E-value=3.3 Score=38.90 Aligned_cols=147 Identities=7% Similarity=-0.036 Sum_probs=98.7
Q ss_pred HHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCC-----------------
Q 021791 89 IVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS----------------- 151 (307)
Q Consensus 89 ~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~----------------- 151 (307)
.++..+...+..+.+.++..... .+...--.+..+|...|++++|.+.|++... |+.
T Consensus 817 ~l~~~l~~~~~~~~~~~l~~~~~-----~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~-~~~~~~~l~~~~~~~~~~~~ 890 (1139)
T 4fhn_B 817 ELVEKLFLFKQYNACMQLIGWLN-----SDPIAVYLKALIYLKSKEAVKAVRCFKTTSL-VLYSHTSQFAVLREFQEIAE 890 (1139)
T ss_dssp HHHHHHHHHSCTTHHHHHHHHSC-----CCHHHHHHHHHHHHHTTCHHHHHHHHHTCCC-SCTTCCCSCSSHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHhhhcc-----CCcHHHHHHHHHHHhcCCHHHHHHHHHHHhh-hhcccchhhhhhcccccccc
Confidence 34555666666666655443322 2444445677889999999999999987532 110
Q ss_pred ------CCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCC-Ccc--HHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCC
Q 021791 152 ------PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLC-VPN--IHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222 (307)
Q Consensus 152 ------~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~--~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~ 222 (307)
.-..-|..++..+.+.+.++.+.++-......... .++ ...|..+..++...|++++|...+-.+.....
T Consensus 891 ~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~pd~~~- 969 (1139)
T 4fhn_B 891 KYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLSTTPL- 969 (1139)
T ss_dssp TTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHHHSSS-
T ss_pred cccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCCCHHH-
Confidence 11234677888889999999998888776654320 122 22678899999999999999999988776533
Q ss_pred CCHHhHHHHHHHHHccCcHHH
Q 021791 223 LDLDSYTMLIHGLCEKQKWKE 243 (307)
Q Consensus 223 ~~~~~~~~li~~~~~~g~~~~ 243 (307)
-......++...+..|..+.
T Consensus 970 -r~~cLr~LV~~lce~~~~~~ 989 (1139)
T 4fhn_B 970 -KKSCLLDFVNQLTKQGKINQ 989 (1139)
T ss_dssp -CHHHHHHHHHHHHHHCCHHH
T ss_pred -HHHHHHHHHHHHHhCCChhh
Confidence 45667777777776655443
No 244
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.34 E-value=4.1 Score=33.63 Aligned_cols=191 Identities=8% Similarity=0.082 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHhc-----CCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHH----Hhc
Q 021791 62 EKTIRNAEKVFDEMRVR-----GIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCL----CSC 132 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~-----~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~----~~~ 132 (307)
.+++++|++.+..+.+. ...........++..|...++++...+.+..+....... ......+++.+ ...
T Consensus 29 ~~~~~~a~e~ll~lEK~~r~~~d~~s~~r~l~~iv~l~~~~~~~~~l~e~i~~Lskkr~ql-k~ai~~~V~~~~~~l~~~ 107 (445)
T 4b4t_P 29 QNDCNSALDQLLVLEKKTRQASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSKKHGQL-KLSIQYMIQKVMEYLKSS 107 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCSTTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTTTS-HHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHhcC
Confidence 46677777777665432 244467778889999999999999988887775543221 22233344333 223
Q ss_pred CChHHH--HHHHHHHHh--CC-CCC---CHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCcc----HHHHHHHHHHH
Q 021791 133 GRIEDA--EELLGEMVR--NG-VSP---SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN----IHTYNILIGMF 200 (307)
Q Consensus 133 ~~~~~a--~~~~~~~~~--~~-~~~---~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~----~~~~~~l~~~~ 200 (307)
...+.. ..+.+.+.. .| +-. .......|...+...|++.+|.+++..+...-.-..+ ...+...++.|
T Consensus 108 ~~~d~~~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~ 187 (445)
T 4b4t_P 108 KSLDLNTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELS 187 (445)
T ss_dssp CTTHHHHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 333221 122211111 01 111 1233456788899999999999999998653210111 34667778899
Q ss_pred HhcCcHHHHHHHHHHHhh----CCCCCCH--HhHHHHHHHHHccCcHHHHHHHHHHHHH
Q 021791 201 MALNRMDMVREIWNHVKG----SELGLDL--DSYTMLIHGLCEKQKWKEACQYFVEMIE 253 (307)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~----~~~~~~~--~~~~~li~~~~~~g~~~~a~~~~~~~~~ 253 (307)
...+++..|..++..+.. ....|+. ..+...+..+...++|.+|...|.+..+
T Consensus 188 l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~ 246 (445)
T 4b4t_P 188 ILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQ 246 (445)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 999999999999988753 2222222 3456677777888888888888777754
No 245
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=92.12 E-value=1.7 Score=28.79 Aligned_cols=52 Identities=6% Similarity=-0.017 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHc
Q 021791 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK 113 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~ 113 (307)
..+..+++.+++++.+.+..-....+-.|.-++.+.|+++.|.+..+.+.+.
T Consensus 56 ~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~ 107 (134)
T 3o48_A 56 VNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 107 (134)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 4445555555555554431112333334444555555555555555555544
No 246
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=91.79 E-value=1.9 Score=28.59 Aligned_cols=72 Identities=10% Similarity=0.035 Sum_probs=40.3
Q ss_pred CccHHHHHHHHHHHHhcCc---HHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcH
Q 021791 187 VPNIHTYNILIGMFMALNR---MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQK 260 (307)
Q Consensus 187 ~~~~~~~~~l~~~~~~~~~---~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~ 260 (307)
.|+..+--.+..++.+..+ ..+++.+++.+...+..-....+-.+.-++.+.|++++|.+..+.+++. .|+.
T Consensus 37 ~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~--eP~N 111 (134)
T 3o48_A 37 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH--ERNN 111 (134)
T ss_dssp GSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT--CTTC
T ss_pred CCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh--CCCC
Confidence 4555555555555555543 3356666666665431112334445556667777777777777777643 4543
No 247
>1v54_E Cytochrome C oxidase polypeptide VA; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: a.118.11.1 PDB: 1oco_E* 1occ_E* 1ocz_E* 1ocr_E* 1v55_E* 2dyr_E* 2dys_E* 2eij_E* 2eik_E* 2eil_E* 2eim_E* 2ein_E* 2occ_E* 2ybb_P* 2zxw_E* 3abk_E* 3abl_E* 3abm_E* 3ag1_E* 3ag2_E* ...
Probab=91.68 E-value=1.6 Score=27.37 Aligned_cols=63 Identities=13% Similarity=0.103 Sum_probs=38.1
Q ss_pred cHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHH
Q 021791 205 RMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268 (307)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~ 268 (307)
+.-+..+-++.+....+.|++......+++|.+-+++..|.++|+-.+.+ ..+...+|..+++
T Consensus 25 D~~e~rrglN~l~~~DlVP~P~ii~aaLrAcRRvND~alAVR~lE~iK~K-~~~~~~iY~~~lq 87 (109)
T 1v54_E 25 DAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDK-AGPHKEIYPYVIQ 87 (109)
T ss_dssp CHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-TTTCTTHHHHHHH
T ss_pred cHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-hcCchhhHHHHHH
Confidence 34455666666666666677777777777777777777777777666554 2223334555543
No 248
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=91.02 E-value=4.7 Score=31.67 Aligned_cols=132 Identities=14% Similarity=0.120 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCch-hHHHHH----HHHHHcC--CCCchhhHHHHHHHHHhcCChHHH
Q 021791 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ-LSLDKL----NFMKEKG--ICPTVATYTSVVKCLCSCGRIEDA 138 (307)
Q Consensus 66 ~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-~a~~~~----~~~~~~~--~~~~~~~~~~ll~~~~~~~~~~~a 138 (307)
|-+.-+++-+.+.++++|......++..+.....-+ .-.+++ .+-.+.| ..-|+.....+...|.+.+++.+|
T Consensus 76 DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~A 155 (336)
T 3lpz_A 76 DLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAA 155 (336)
T ss_dssp HHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHH
Confidence 334445566666777888877777777776655322 112222 2223333 344677788888999999999888
Q ss_pred HHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHh
Q 021791 139 EELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217 (307)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~ 217 (307)
+..|- .|-.++...+..++..+...+... .++...-.+++. |...++...|..+++...
T Consensus 156 e~H~i----lg~~~s~~~~a~mL~ew~~~~~~~---------------e~dlfiaRaVL~-yL~l~n~~~A~~~~~~f~ 214 (336)
T 3lpz_A 156 EKHLV----LGTKESPEVLARMEYEWYKQDESH---------------TAPLYCARAVLP-YLLVANVRAANTAYRIFT 214 (336)
T ss_dssp HHHHT----TSCTTHHHHHHHHHHHHHHTSCGG---------------GHHHHHHHHHHH-HHHTTCHHHHHHHHHHHH
T ss_pred HHHHH----hcCCchHHHHHHHHHHHHHhcCCc---------------cHHHHHHHHHHH-HHHhCCHHHHHHHHHHHH
Confidence 87772 233334456655555544443322 223333333333 334666777766655544
No 249
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.93 E-value=5.4 Score=32.72 Aligned_cols=100 Identities=9% Similarity=-0.035 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHc--CCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhC---CCCCCHhh--H
Q 021791 85 TSFSIVLHVYSRAHKPQLSLDKLNFMKEK--GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN---GVSPSAET--Y 157 (307)
Q Consensus 85 ~~~~~ll~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~--~ 157 (307)
.+...+...|.+.|+.+.|.+.|.++... +...-...+..++..+...+++..+...+.++... +..|+... .
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk 211 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYK 211 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHH
Confidence 36778999999999999999999999875 33334567888899999999999999999887643 32222221 1
Q ss_pred HHHHHHHhcCCChhHHHHHHHHHhhcC
Q 021791 158 NCFFKEYRGRKDANGAMKLYRQMKEDD 184 (307)
Q Consensus 158 ~~l~~~~~~~~~~~~a~~~~~~~~~~~ 184 (307)
..-...+...+++..|...|-+.....
T Consensus 212 ~~~gl~~l~~r~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 212 TYYGIHCLAVRNFKEAAKLLVDSLATF 238 (429)
T ss_dssp HHHHHGGGGTSCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhChHHHHHHHHHHHhccC
Confidence 112223456789999988888776543
No 250
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=90.53 E-value=7.4 Score=36.61 Aligned_cols=146 Identities=13% Similarity=0.013 Sum_probs=94.1
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCC------------------
Q 021791 124 SVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDL------------------ 185 (307)
Q Consensus 124 ~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~------------------ 185 (307)
.++..+...+..+.+.++..... -+...--.+..+|...|++++|...|.+.-..-.
T Consensus 817 ~l~~~l~~~~~~~~~~~l~~~~~-----~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~ 891 (1139)
T 4fhn_B 817 ELVEKLFLFKQYNACMQLIGWLN-----SDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEK 891 (1139)
T ss_dssp HHHHHHHHHSCTTHHHHHHHHSC-----CCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHT
T ss_pred HHHHHHHHhhhHHHHHHHhhhcc-----CCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhccccccccc
Confidence 34455666666666655443322 2444444566778999999999999977521100
Q ss_pred ---CCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCH----HhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCC
Q 021791 186 ---CVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL----DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258 (307)
Q Consensus 186 ---~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~----~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p 258 (307)
...-..-|..++..+-+.+.++.+.++-....+....-+. ..|..+...+...|++++|...+..+-+...+
T Consensus 892 ~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~pd~~~r- 970 (1139)
T 4fhn_B 892 YHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLSTTPLK- 970 (1139)
T ss_dssp TTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHHHSSSC-
T ss_pred ccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCCCHHHH-
Confidence 0011233667788888889999888887766553221121 25788899999999999999999887765433
Q ss_pred cHhhHHHHHHHHhhchhH
Q 021791 259 QKVTFETLYRGLIQSDML 276 (307)
Q Consensus 259 ~~~~~~~l~~~~~~~g~~ 276 (307)
...+..++..+++.|..
T Consensus 971 -~~cLr~LV~~lce~~~~ 987 (1139)
T 4fhn_B 971 -KSCLLDFVNQLTKQGKI 987 (1139)
T ss_dssp -HHHHHHHHHHHHHHCCH
T ss_pred -HHHHHHHHHHHHhCCCh
Confidence 34566777666655543
No 251
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=90.38 E-value=0.026 Score=46.57 Aligned_cols=218 Identities=10% Similarity=0.056 Sum_probs=123.4
Q ss_pred cHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCC
Q 021791 3 NVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82 (307)
Q Consensus 3 ~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 82 (307)
|+..|..+|.+..+.|.+++-+..+.-..+..- ++..=+.|+-+|++.+++..-+.+ . -.|
T Consensus 82 Dps~y~eVi~~A~~~~~~edLv~yL~MaRk~~k--e~~IDteLi~ayAk~~rL~elEef--------------l---~~~ 142 (624)
T 3lvg_A 82 DPSSYMEVVQAANTSGNWEELVKYLQMARKKAR--ESYVETELIFALAKTNRLAELEEF--------------I---NGP 142 (624)
T ss_dssp CCCSSSHHHHHTTTSSCCTTHHHHHHTTSTTCC--STTTTHHHHHHHHTSCSSSTTTST--------------T---SCC
T ss_pred ChHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhc--ccccHHHHHHHHHhhCcHHHHHHH--------------H---cCC
Confidence 444555666666666666666666654444322 223334566666665443322111 1 123
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcC--------------------CCCchhhHHHHHHHHHhcCChHHHHHHH
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKG--------------------ICPTVATYTSVVKCLCSCGRIEDAEELL 142 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~--------------------~~~~~~~~~~ll~~~~~~~~~~~a~~~~ 142 (307)
|..-...+..-|...|.++.|.-+|..+..-. -..++.||-.+-.+|...+.+.-|-..-
T Consensus 143 N~A~iq~VGDrcf~e~lYeAAKilys~isN~akLAstLV~L~~yq~AVdaArKAns~ktWKeV~~ACvd~~EfrLAqicG 222 (624)
T 3lvg_A 143 NNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCG 222 (624)
T ss_dssp SSSCTHHHHHHHHHSCCSTTSSTTGGGSCCCTTTSSSSSSCSGGGSSTTTTTTCCSSCSHHHHTHHHHHSCTTTTTTHHH
T ss_pred CcccHHHHHHHHHHccCHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHhCchHHHHHHHhc
Confidence 44444445555555555555544443332110 1236677888888888888777765554
Q ss_pred HHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhC-CC
Q 021791 143 GEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS-EL 221 (307)
Q Consensus 143 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~-~~ 221 (307)
-.+.- ...-...++..|...|.+++.+.+++...... ......|+-|.-.|++-. .++..+-++..-.+ ++
T Consensus 223 LniIv-----hadeL~elv~~YE~~G~f~ELIsLlEaglglE--rAHmGmFTELaILYsKY~-PeKlmEHlklf~sriNi 294 (624)
T 3lvg_A 223 LHIVV-----HADELEELINYYQDRGYFEELITMLEAALGLE--RAHMGMFTELAILYSKFK-PQKMREHLELFWSRVNI 294 (624)
T ss_dssp HHHHC-----CSSCCSGGGSSSSTTCCCTTSTTTHHHHTTST--TCCHHHHHHHHHHHHSSC-TTHHHHHHTTSSSSSCC
T ss_pred chhcc-----cHHHHHHHHHHHHhCCCHHHHHHHHHHHhCCC--chhHHHHHHHHHHHHhcC-HHHHHHHHHHHHHhccH
Confidence 44432 22223346667888899999999998887554 678889999998888763 44443333332221 22
Q ss_pred CC------CHHhHHHHHHHHHccCcHHHHHHH
Q 021791 222 GL------DLDSYTMLIHGLCEKQKWKEACQY 247 (307)
Q Consensus 222 ~~------~~~~~~~li~~~~~~g~~~~a~~~ 247 (307)
+. ....|..++-.|.+-.+++.|...
T Consensus 295 pKviracE~ahLW~ElvfLY~~ydE~DnA~lt 326 (624)
T 3lvg_A 295 PKVLRAAEQAHLWAELVFLYDKYEEYDNAIIT 326 (624)
T ss_dssp TTTHHHHTTTTCHHHHHHHHHHHTCHHHHHHT
T ss_pred HHHHHHHHHHhhHHHHHHHHhcchhHHHHHHH
Confidence 11 334577778778877777766543
No 252
>2y69_E Cytochrome C oxidase subunit 5A; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=90.13 E-value=2.9 Score=27.78 Aligned_cols=62 Identities=13% Similarity=0.106 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHH
Q 021791 206 MDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYR 268 (307)
Q Consensus 206 ~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~ 268 (307)
.-+..+-++.+....+.|++......+++|.+-+++..|..+|+-.+.+ ..+....|..+++
T Consensus 69 ~wElrrglN~l~~~DlVPeP~Ii~AALrAcRRvNDfalAVR~lE~vK~K-~~~~~~iY~y~lq 130 (152)
T 2y69_E 69 AWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDK-AGPHKEIYPYVIQ 130 (152)
T ss_dssp HHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-TTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCchhhHHHHHH
Confidence 3455566666666677777777777777777777777777777766655 2333445665553
No 253
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=89.96 E-value=6.7 Score=31.72 Aligned_cols=166 Identities=12% Similarity=0.060 Sum_probs=96.3
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHc-CCCC---chhhHHHHHHHHHhcC-ChHHHHHHHHHHHhCCCCCCHhhH---
Q 021791 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEK-GICP---TVATYTSVVKCLCSCG-RIEDAEELLGEMVRNGVSPSAETY--- 157 (307)
Q Consensus 86 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~-~~~~---~~~~~~~ll~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~--- 157 (307)
....|...|.+.|+.++..+++...... +.-| .......++..+.... ..+.-.++..+..+..-. ...+|
T Consensus 21 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~-~~r~flr~ 99 (394)
T 3txn_A 21 GILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQ-EKRTFLRQ 99 (394)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 4556778888888888888877765432 1111 2334556677666543 333334444443332110 11233
Q ss_pred ---HHHHHHHhcCCChhHHHHHHHHHhhcCCC----CccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhC--CCCCCHHhH
Q 021791 158 ---NCFFKEYRGRKDANGAMKLYRQMKEDDLC----VPNIHTYNILIGMFMALNRMDMVREIWNHVKGS--ELGLDLDSY 228 (307)
Q Consensus 158 ---~~l~~~~~~~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~ 228 (307)
..++..|...|++.+|..++..+.+.-.- .--..++..-++.|...+++.++...+...... .+.+++...
T Consensus 100 ~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~ 179 (394)
T 3txn_A 100 SLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQ 179 (394)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHH
Confidence 25778888999999998888887664210 112344566677788889998888888776542 122333332
Q ss_pred HHH----HHHHH-ccCcHHHHHHHHHHHH
Q 021791 229 TML----IHGLC-EKQKWKEACQYFVEMI 252 (307)
Q Consensus 229 ~~l----i~~~~-~~g~~~~a~~~~~~~~ 252 (307)
..+ ...+. ..++|+.|...|-+..
T Consensus 180 a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf 208 (394)
T 3txn_A 180 GALDLQSGILHAADERDFKTAFSYFYEAF 208 (394)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHhccCHHHHHHHHHHHH
Confidence 221 12234 6778888877776653
No 254
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=89.29 E-value=2.6 Score=29.19 Aligned_cols=63 Identities=3% Similarity=-0.118 Sum_probs=41.0
Q ss_pred hhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccH-------HHHHHHHHHHHhcCcHHHHHHHHHHHh
Q 021791 155 ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNI-------HTYNILIGMFMALNRMDMVREIWNHVK 217 (307)
Q Consensus 155 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-------~~~~~l~~~~~~~~~~~~a~~~~~~~~ 217 (307)
.++-.-++.+...+.++.|.-+.+.+.......|+. .++..+.+++...+++..|...|++..
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qAL 90 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMAL 90 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 344455666777888888877777755432113331 355667777778888888888887754
No 255
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=88.56 E-value=9.4 Score=31.51 Aligned_cols=188 Identities=10% Similarity=0.088 Sum_probs=114.2
Q ss_pred CCchhHHHHHHHHHHc-----CCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHH----hcCC
Q 021791 98 HKPQLSLDKLNFMKEK-----GICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEY----RGRK 168 (307)
Q Consensus 98 ~~~~~a~~~~~~~~~~-----~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~ 168 (307)
|+++.|++.+..+.+. +...+......++..|...|+++...+.+..+....-. .......+++.+ ....
T Consensus 30 ~~~~~a~e~ll~lEK~~r~~~d~~s~~r~l~~iv~l~~~~~~~~~l~e~i~~Lskkr~q-lk~ai~~~V~~~~~~l~~~~ 108 (445)
T 4b4t_P 30 NDCNSALDQLLVLEKKTRQASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSKKHGQ-LKLSIQYMIQKVMEYLKSSK 108 (445)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCSTTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTTT-SHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHhcCC
Confidence 5667777776665532 23445666788999999999999998887766643211 222233344332 2223
Q ss_pred ChhH--HHHHHHHHhh--cCCCCc---cHHHHHHHHHHHHhcCcHHHHHHHHHHHhhC--CCCCC---HHhHHHHHHHHH
Q 021791 169 DANG--AMKLYRQMKE--DDLCVP---NIHTYNILIGMFMALNRMDMVREIWNHVKGS--ELGLD---LDSYTMLIHGLC 236 (307)
Q Consensus 169 ~~~~--a~~~~~~~~~--~~~~~~---~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~--~~~~~---~~~~~~li~~~~ 236 (307)
..+. -..+...+.. .+.... .......|...+...|++.+|.+++..+... +.... ...+...++.|.
T Consensus 109 ~~d~~~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l 188 (445)
T 4b4t_P 109 SLDLNTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSI 188 (445)
T ss_dssp TTHHHHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 2222 2222222211 111011 2344567888999999999999999987642 22111 235677788999
Q ss_pred ccCcHHHHHHHHHHHHHc----CCCCcH--hhHHHHHHHHhhchhHHHHHHHHHHh
Q 021791 237 EKQKWKEACQYFVEMIEK----GLLPQK--VTFETLYRGLIQSDMLRTWRRLKKKL 286 (307)
Q Consensus 237 ~~g~~~~a~~~~~~~~~~----~~~p~~--~~~~~l~~~~~~~g~~~~a~~~~~~~ 286 (307)
..+++.+|..++.+.... ...|+. ..+...+..+...+++.+|-+.|.++
T Consensus 189 ~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~ 244 (445)
T 4b4t_P 189 LKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEI 244 (445)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 999999999999987532 222222 23555666677777887777766655
No 256
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=88.12 E-value=5 Score=27.82 Aligned_cols=24 Identities=13% Similarity=0.044 Sum_probs=12.7
Q ss_pred HHHHHHHHhcCCChhHHHHHHHHH
Q 021791 157 YNCFFKEYRGRKDANGAMKLYRQM 180 (307)
Q Consensus 157 ~~~l~~~~~~~~~~~~a~~~~~~~ 180 (307)
+..+.+++...+++..|...|++.
T Consensus 66 l~~ladalf~~~eyrrA~~~y~qA 89 (167)
T 3ffl_A 66 LVYHADSLFHDKEYRNAVSKYTMA 89 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHH
Confidence 344445555555555555555554
No 257
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=87.52 E-value=4.9 Score=27.05 Aligned_cols=52 Identities=6% Similarity=-0.017 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHc
Q 021791 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK 113 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~ 113 (307)
..+..+++.+++++...+..-.....-.|.-++.+.|++++|.++.+.+.+.
T Consensus 55 ~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 55 VNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 106 (144)
T ss_dssp HHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 4555556666666555432212233334444555566666666665555554
No 258
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.48 E-value=8.3 Score=31.62 Aligned_cols=99 Identities=8% Similarity=-0.024 Sum_probs=69.7
Q ss_pred hhHHHHHHHHHhcCChHHHHHHHHHHHhCC--CCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHH--
Q 021791 120 ATYTSVVKCLCSCGRIEDAEELLGEMVRNG--VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNI-- 195 (307)
Q Consensus 120 ~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-- 195 (307)
.+...+...|.+.|+++.|.+.+.++.... ..--...+-.+++.+...+++..+...+.+....-...++....+.
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk 211 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYK 211 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHH
Confidence 367789999999999999999999998753 2333567888899999999999999999887543211233222221
Q ss_pred --HHHHHHhcCcHHHHHHHHHHHhh
Q 021791 196 --LIGMFMALNRMDMVREIWNHVKG 218 (307)
Q Consensus 196 --l~~~~~~~~~~~~a~~~~~~~~~ 218 (307)
-...+...+++..|...|-+...
T Consensus 212 ~~~gl~~l~~r~f~~Aa~~f~e~~~ 236 (429)
T 4b4t_R 212 TYYGIHCLAVRNFKEAAKLLVDSLA 236 (429)
T ss_dssp HHHHHGGGGTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhChHHHHHHHHHHHhc
Confidence 12223456888888887766554
No 259
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=87.21 E-value=5.1 Score=26.95 Aligned_cols=68 Identities=10% Similarity=0.033 Sum_probs=36.5
Q ss_pred CCchhhHHHHHHHHHhcCChH---HHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhc
Q 021791 116 CPTVATYTSVVKCLCSCGRIE---DAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 116 ~~~~~~~~~ll~~~~~~~~~~---~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 183 (307)
.|+..+-..+..++.++.+.+ +++.+++.+...+..-.....-.+.-++.+.|++++|.+..+.+.+.
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 106 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 345555555555566555433 45555655555432223333444455566666666666666666665
No 260
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=86.26 E-value=7.5 Score=27.93 Aligned_cols=56 Identities=4% Similarity=-0.035 Sum_probs=33.5
Q ss_pred CChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCC
Q 021791 168 KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223 (307)
Q Consensus 168 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 223 (307)
+....+..+|..|...++..--...|..-...+...|++.+|.++++.-.+.+..|
T Consensus 93 ~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P 148 (202)
T 3esl_A 93 NNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRP 148 (202)
T ss_dssp TCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBS
T ss_pred cccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc
Confidence 33456666666666665544455555666666666666666666666666655554
No 261
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=86.00 E-value=3.3 Score=31.33 Aligned_cols=115 Identities=10% Similarity=0.021 Sum_probs=78.6
Q ss_pred HHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHH----hHHHHHHHHH
Q 021791 161 FKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD----SYTMLIHGLC 236 (307)
Q Consensus 161 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~----~~~~li~~~~ 236 (307)
+....+.|++++++.....-.+.. +.|...-..+++.+|-.|+++.|.+-++...+.. |+.. .|..+|.+
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~--P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~--p~~~~~a~~yr~lI~a-- 77 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKAS--PKDASLRSSFIELLCIDGDFERADEQLMQSIKLF--PEYLPGASQLRHLVKA-- 77 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTC--TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--GGGHHHHHHHHHHHHH--
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhC--CcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC--chhhHHHHHHHHHHHH--
Confidence 345678899999999999888886 7888888999999999999999999999888753 3322 33444432
Q ss_pred ccCcHHHHHHHHHHHHHcCCCC-----cHhhHHHHHHHHh--hchhHHHHHHHHHHhhhc
Q 021791 237 EKQKWKEACQYFVEMIEKGLLP-----QKVTFETLYRGLI--QSDMLRTWRRLKKKLDEE 289 (307)
Q Consensus 237 ~~g~~~~a~~~~~~~~~~~~~p-----~~~~~~~l~~~~~--~~g~~~~a~~~~~~~~~~ 289 (307)
...=.+...-+-.| ...-...++.+.. ..|+.++|..+.....+.
T Consensus 78 --------E~~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ 129 (273)
T 1zbp_A 78 --------AQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEEL 129 (273)
T ss_dssp --------HHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhc
Confidence 22222222222222 2234555666654 568999999988887554
No 262
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=85.50 E-value=11 Score=29.28 Aligned_cols=130 Identities=8% Similarity=0.038 Sum_probs=69.8
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCch-----hHHHHHHHHHHcC--CCCchhhHHHHHHHHHhcCChHHHHH
Q 021791 68 AEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQ-----LSLDKLNFMKEKG--ICPTVATYTSVVKCLCSCGRIEDAEE 140 (307)
Q Consensus 68 a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-----~a~~~~~~~~~~~--~~~~~~~~~~ll~~~~~~~~~~~a~~ 140 (307)
+.-+.+-+.+.+.+++......++..+.....-+ -..+.+.+..+.| ...++..+..+...|.+.|++.+|+.
T Consensus 76 a~llvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~ 155 (312)
T 2wpv_A 76 IFYLLEVYDLAEVKVDDISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAER 155 (312)
T ss_dssp HHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHH
Confidence 4445556666677778777777777766533211 1222233333332 22366777888888888888888777
Q ss_pred HHHHHHhCCCCCCHhhHHHHHHHHhcC---CChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHh
Q 021791 141 LLGEMVRNGVSPSAETYNCFFKEYRGR---KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217 (307)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~ 217 (307)
.|-. |-.-+...+..++.-+... |...+ ++...-.+++ -|...++...|..+++...
T Consensus 156 H~i~----~~~~s~~~~a~~l~~w~~~~~~~~~~e---------------~dlf~~RaVL-~yL~l~n~~~A~~~~~~f~ 215 (312)
T 2wpv_A 156 YFML----GTHDSMIKYVDLLWDWLCQVDDIEDST---------------VAEFFSRLVF-NYLFISNISFAHESKDIFL 215 (312)
T ss_dssp HHHT----SCHHHHHHHHHHHHHHHHHTTCCCHHH---------------HHHHHHHHHH-HHHHTTBHHHHHHHHHHHH
T ss_pred HHHh----CCCccHHHHHHHHHHHHHhcCCCCcch---------------HHHHHHHHHH-HHHHhcCHHHHHHHHHHHH
Confidence 6631 1111344444444433332 22222 1222222233 3445778888888877654
No 263
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=84.08 E-value=8.1 Score=29.24 Aligned_cols=114 Identities=16% Similarity=0.083 Sum_probs=78.6
Q ss_pred HHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHH----HHHHHHHHHHh
Q 021791 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIH----TYNILIGMFMA 202 (307)
Q Consensus 127 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~ 202 (307)
....+.|+++++++....-++..+. |...-..+++.+|-.|++++|..-++...+.. |+.. .|..+|.+
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~-da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~---p~~~~~a~~yr~lI~a--- 77 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLF---PEYLPGASQLRHLVKA--- 77 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHH---
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC---chhhHHHHHHHHHHHH---
Confidence 4567889999999999888887654 88888999999999999999999998887763 4432 33333332
Q ss_pred cCcHHHHHHHHHHHhhCCCCC-----CHHhHHHHHHHHH--ccCcHHHHHHHHHHHHHc
Q 021791 203 LNRMDMVREIWNHVKGSELGL-----DLDSYTMLIHGLC--EKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~~-----~~~~~~~li~~~~--~~g~~~~a~~~~~~~~~~ 254 (307)
+..=.++..-+-.| ...-...++++.. ..|+.++|..+-.++.+.
T Consensus 78 -------E~~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ 129 (273)
T 1zbp_A 78 -------AQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEEL 129 (273)
T ss_dssp -------HHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhc
Confidence 22222222222222 3334555666654 469999999999988765
No 264
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=84.04 E-value=15 Score=29.64 Aligned_cols=166 Identities=6% Similarity=-0.075 Sum_probs=106.2
Q ss_pred HHHHHHHHHHhcCchhhHHHHHHHHHhc-CCCC---cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCC
Q 021791 6 MYTSLIYGWCKINRIDMAERFLGEMIER-GVEP---NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE 81 (307)
Q Consensus 6 ~~~~li~~~~~~g~~~~a~~~~~~~~~~-~~~p---~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 81 (307)
+...|...|.+.|+.++..+++.....- +.-| .......++..+....... ...++-..+.++.....
T Consensus 21 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~--- 92 (394)
T 3txn_A 21 GILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGT-----GIEVQLCKDCIEWAKQE--- 92 (394)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCH-----HHHHHHHHHHHHHHHHT---
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcH-----HHHHHHHHHHHHHHHHH---
Confidence 4456888999999999999998877543 2222 3345667777776643211 33344444444444332
Q ss_pred CCHHHH------HHHHHHHHhcCCchhHHHHHHHHHHcCCCCc-----hhhHHHHHHHHHhcCChHHHHHHHHHHHhC--
Q 021791 82 PDVTSF------SIVLHVYSRAHKPQLSLDKLNFMKEKGICPT-----VATYTSVVKCLCSCGRIEDAEELLGEMVRN-- 148 (307)
Q Consensus 82 ~~~~~~------~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~-- 148 (307)
..+| .-++..|...|++.+|.+++..+.+.--..| ..++..-+..|...+++.++...+......
T Consensus 93 --~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ 170 (394)
T 3txn_A 93 --KRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTAN 170 (394)
T ss_dssp --TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhc
Confidence 1223 2678899999999999999988876421212 334666777888999999999999887643
Q ss_pred CCCCCHhhHHHH----HHHHh-cCCChhHHHHHHHHHh
Q 021791 149 GVSPSAETYNCF----FKEYR-GRKDANGAMKLYRQMK 181 (307)
Q Consensus 149 ~~~~~~~~~~~l----~~~~~-~~~~~~~a~~~~~~~~ 181 (307)
.+.+++.....+ ...+. ..+++..|...|-+..
T Consensus 171 ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf 208 (394)
T 3txn_A 171 AIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAF 208 (394)
T ss_dssp HSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHH
Confidence 222333332211 22355 7899999988887764
No 265
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=83.86 E-value=9.9 Score=27.30 Aligned_cols=59 Identities=15% Similarity=0.040 Sum_probs=48.2
Q ss_pred cCcHHHHHHHHHHHhhCCCCCC-HHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHh
Q 021791 203 LNRMDMVREIWNHVKGSELGLD-LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261 (307)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~~~-~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~ 261 (307)
++....+..+|..|...|+.-. ..-|......+-..|++++|.++|+.-++.+-.|-..
T Consensus 92 ~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P~~r 151 (202)
T 3esl_A 92 SNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRPYNR 151 (202)
T ss_dssp TTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHH
T ss_pred ccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHHH
Confidence 4457799999999998877644 3457888888899999999999999999998888443
No 266
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=83.16 E-value=0.0082 Score=49.37 Aligned_cols=187 Identities=13% Similarity=0.100 Sum_probs=110.2
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHH
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFK 162 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~ 162 (307)
|+..|..++.+..+.|.+++-.+++...++..- ++..=+.|+-+|++.++..+.++.+. .|+..-...+.+
T Consensus 82 Dps~y~eVi~~A~~~~~~edLv~yL~MaRk~~k--e~~IDteLi~ayAk~~rL~elEefl~-------~~N~A~iq~VGD 152 (624)
T 3lvg_A 82 DPSSYMEVVQAANTSGNWEELVKYLQMARKKAR--ESYVETELIFALAKTNRLAELEEFIN-------GPNNAHIQQVGD 152 (624)
T ss_dssp CCCSSSHHHHHTTTSSCCTTHHHHHHTTSTTCC--STTTTHHHHHHHHTSCSSSTTTSTTS-------CCSSSCTHHHHH
T ss_pred ChHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhc--ccccHHHHHHHHHhhCcHHHHHHHHc-------CCCcccHHHHHH
Confidence 666788899999999999999999987776633 55566789999999988766543331 245555556666
Q ss_pred HHhcCCChhHHHHHHHHHhhcCC-------------------CCccHHHHHHHHHHHHhcCcHHHHHHH-----------
Q 021791 163 EYRGRKDANGAMKLYRQMKEDDL-------------------CVPNIHTYNILIGMFMALNRMDMVREI----------- 212 (307)
Q Consensus 163 ~~~~~~~~~~a~~~~~~~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~a~~~----------- 212 (307)
-|...|.++.|.-+|..+..-.. -..++.||..+-.+|...+.+..|...
T Consensus 153 rcf~e~lYeAAKilys~isN~akLAstLV~L~~yq~AVdaArKAns~ktWKeV~~ACvd~~EfrLAqicGLniIvhadeL 232 (624)
T 3lvg_A 153 RCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADEL 232 (624)
T ss_dssp HHHHSCCSTTSSTTGGGSCCCTTTSSSSSSCSGGGSSTTTTTTCCSSCSHHHHTHHHHHSCTTTTTTHHHHHHHCCSSCC
T ss_pred HHHHccCHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHhCchHHHHHHHhcchhcccHHHH
Confidence 66666666666665554422111 133566777777777766665554433
Q ss_pred -------------------HHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhc
Q 021791 213 -------------------WNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273 (307)
Q Consensus 213 -------------------~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~ 273 (307)
++.-... -+.....|+.|.-.|++- ++++..+-++... +....--++++|.+.
T Consensus 233 ~elv~~YE~~G~f~ELIsLlEaglgl-ErAHmGmFTELaILYsKY-~PeKlmEHlklf~------sriNipKviracE~a 304 (624)
T 3lvg_A 233 EELINYYQDRGYFEELITMLEAALGL-ERAHMGMFTELAILYSKF-KPQKMREHLELFW------SRVNIPKVLRAAEQA 304 (624)
T ss_dssp SGGGSSSSTTCCCTTSTTTHHHHTTS-TTCCHHHHHHHHHHHHSS-CTTHHHHHHTTSS------SSSCCTTTHHHHTTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHhCC-CchhHHHHHHHHHHHHhc-CHHHHHHHHHHHH------HhccHHHHHHHHHHH
Confidence 3332221 122445566666656554 2233222222211 111223367777777
Q ss_pred hhHHHHHHHHHHh
Q 021791 274 DMLRTWRRLKKKL 286 (307)
Q Consensus 274 g~~~~a~~~~~~~ 286 (307)
-.|.++.-++.+-
T Consensus 305 hLW~ElvfLY~~y 317 (624)
T 3lvg_A 305 HLWAELVFLYDKY 317 (624)
T ss_dssp TCHHHHHHHHHHH
T ss_pred hhHHHHHHHHhcc
Confidence 7777766666543
No 267
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=81.29 E-value=7.7 Score=24.21 Aligned_cols=13 Identities=8% Similarity=0.115 Sum_probs=5.7
Q ss_pred HhcCCChhHHHHH
Q 021791 164 YRGRKDANGAMKL 176 (307)
Q Consensus 164 ~~~~~~~~~a~~~ 176 (307)
+...|++++|..+
T Consensus 49 LmNrG~Yq~Al~l 61 (115)
T 2uwj_G 49 LANQGRYQEALAF 61 (115)
T ss_dssp HHHTTCHHHHHGG
T ss_pred HHcchhHHHHHHh
Confidence 3344444444433
No 268
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=80.65 E-value=8.2 Score=24.13 Aligned_cols=49 Identities=16% Similarity=0.196 Sum_probs=20.8
Q ss_pred HhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhC
Q 021791 164 YRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGS 219 (307)
Q Consensus 164 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 219 (307)
+...|++++|..+.+... .||...|.+|... +.|..+++..-+.++..+
T Consensus 50 LmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~--rlGl~s~le~rL~~la~s 98 (116)
T 2p58_C 50 LMNRGDYASALQQGNKLA-----YPDLEPWLALCEY--RLGLGSALESRLNRLARS 98 (116)
T ss_dssp HHHTTCHHHHHHHHTTSC-----CGGGHHHHHHHHH--HHTCHHHHHHHHHHHTTC
T ss_pred HHcchhHHHHHHhcCCCC-----CchHHHHHHHHHH--hcccHHHHHHHHHHHHhC
Confidence 344455555544443332 3444444444322 344444444444344333
No 269
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=79.40 E-value=3.2 Score=30.28 Aligned_cols=201 Identities=12% Similarity=0.103 Sum_probs=85.7
Q ss_pred HHHHHHhcCCCCCHH--HHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhh---HHHHHHHHHhcCChHHHHHHHHHH
Q 021791 71 VFDEMRVRGIEPDVT--SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT---YTSVVKCLCSCGRIEDAEELLGEM 145 (307)
Q Consensus 71 ~~~~~~~~~~~~~~~--~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~---~~~ll~~~~~~~~~~~a~~~~~~~ 145 (307)
+++.+.+.|..++.. .-...+...+..|+.+- ++.+.+.|..++... -...+...+..|+.+-+. .+
T Consensus 24 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~----v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~----~L 95 (240)
T 3eu9_A 24 RCRELVEAGYDVRQPDKENVTLLHWAAINNRIDL----VKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVV----QL 95 (240)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH----HHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHH----HH
T ss_pred HHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHH----HHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHH----HH
Confidence 344455555444322 11234555666777654 444445554332111 123444555667765444 44
Q ss_pred HhCCCCCCH---hhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCC
Q 021791 146 VRNGVSPSA---ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222 (307)
Q Consensus 146 ~~~~~~~~~---~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~ 222 (307)
.+.|..++. ...+. +...+..|+.+-+..+++.-.... ..+..-.+.+..++...+..+ ..+++ ...|..
T Consensus 96 l~~g~~~~~~~~~g~t~-l~~A~~~~~~~~~~~Ll~~~~~~~--~~~~~g~t~l~~a~~~~~~~~-~~~~L---~~~~~~ 168 (240)
T 3eu9_A 96 MKYGADPSLIDGEGCSC-IHLAAQFGHTSIVAYLIAKGQDVD--MMDQNGMTPLMWAAYRTHSVD-PTRLL---LTFNVS 168 (240)
T ss_dssp HHTTCCTTCCCTTSCCH-HHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHHCCSST-THHHH---HHTTCC
T ss_pred HHcCCCCcccCCCCCCH-HHHHHHcCHHHHHHHHHhcCCCcc--ccCCCCCcHHHHHHHhCChHH-HHHHH---HhcCCC
Confidence 444544432 22222 333445567654444444321111 122222333444433333332 22322 223333
Q ss_pred CCHHh---HHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhH--HHHHHHHhhchhHHHHHHHHHHhhhcC
Q 021791 223 LDLDS---YTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTF--ETLYRGLIQSDMLRTWRRLKKKLDEES 290 (307)
Q Consensus 223 ~~~~~---~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~--~~l~~~~~~~g~~~~a~~~~~~~~~~~ 290 (307)
++... -...+...+..|+.+ +.+.+++.|..++.... ...+....+.|+.+-+..+++...+.+
T Consensus 169 ~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 169 VNLGDKYHKNTALHWAVLAGNTT----VISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp TTCCCTTTCCCHHHHHHHHTCHH----HHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC----
T ss_pred cchhhccCCCcHHHHHHHcCCHH----HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccC
Confidence 22211 112333445566655 34444455665553321 123444566777777777766655443
No 270
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=78.82 E-value=16 Score=26.49 Aligned_cols=181 Identities=11% Similarity=0.041 Sum_probs=85.1
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHcCCCCchhh--HHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHh---hHHHHHHHH
Q 021791 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT--YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE---TYNCFFKEY 164 (307)
Q Consensus 90 ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~---~~~~l~~~~ 164 (307)
.+...+..|+.+.+..+++.+.+.|..++... -.+.+...+..|+.+-+ +.+.+.|..++.. -.+ .+...
T Consensus 12 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v----~~Ll~~g~~~~~~~~~g~t-~l~~A 86 (241)
T 1k1a_A 12 PLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVV----RLLVTAGASPMALDRHGQT-AAHLA 86 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH----HHHHHTTCCTTCCCTTSCC-HHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHH----HHHHHcCCCccccCCCCCC-HHHHH
Confidence 34455677888877777777766665443221 12234445566776544 4444455444322 222 23334
Q ss_pred hcCCChhHHHHHHHHHhhcC--CCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHH---hHHHHHHHHHccC
Q 021791 165 RGRKDANGAMKLYRQMKEDD--LCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD---SYTMLIHGLCEKQ 239 (307)
Q Consensus 165 ~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~---~~~~li~~~~~~g 239 (307)
+..|+.+-+..+++...... ....+..-.+. +...+..|+.+.+..+++ .|..++.. .-...+...+..|
T Consensus 87 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~-L~~A~~~~~~~~~~~Ll~----~g~~~~~~~~~~g~t~L~~A~~~~ 161 (241)
T 1k1a_A 87 CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTA-LHVAVNTECQETVQLLLE----RGADIDAVDIKSGRSPLIHAVENN 161 (241)
T ss_dssp HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCH-HHHHHHHTCHHHHHHHHH----TTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHcCCCccccccccCcCCCcH-HHHHHHcCCHHHHHHHHH----cCCCcccccccCCCcHHHHHHHcC
Confidence 56677766666665543111 00122222222 333445666665555544 33333221 1112233344566
Q ss_pred cHHHHHHHHHHHHHcCCCCcHhhH--HHHHHHHhhchhHHHHHHHHH
Q 021791 240 KWKEACQYFVEMIEKGLLPQKVTF--ETLYRGLIQSDMLRTWRRLKK 284 (307)
Q Consensus 240 ~~~~a~~~~~~~~~~~~~p~~~~~--~~l~~~~~~~g~~~~a~~~~~ 284 (307)
+.+ +++.+++.|..++.... ...+......|..+-+..+++
T Consensus 162 ~~~----~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 204 (241)
T 1k1a_A 162 SLS----MVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVR 204 (241)
T ss_dssp CHH----HHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHH
T ss_pred CHH----HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 654 44445555665543211 122333345666655444443
No 271
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=78.01 E-value=12 Score=24.61 Aligned_cols=23 Identities=22% Similarity=0.330 Sum_probs=11.7
Q ss_pred HHHHHHHhcCCChhHHHHHHHHH
Q 021791 158 NCFFKEYRGRKDANGAMKLYRQM 180 (307)
Q Consensus 158 ~~l~~~~~~~~~~~~a~~~~~~~ 180 (307)
..++.-|...|+.++|.+.++++
T Consensus 11 ~~ll~EY~~~~D~~Ea~~cl~eL 33 (129)
T 2nsz_A 11 DMLLKEYLLSGDISEAEHCLKEL 33 (129)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHh
Confidence 34444555555555555555554
No 272
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=77.43 E-value=25 Score=27.95 Aligned_cols=79 Identities=5% Similarity=-0.016 Sum_probs=44.0
Q ss_pred HHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHH
Q 021791 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTS 86 (307)
Q Consensus 7 ~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 86 (307)
...+|.-|...|+.++|...++++..... .......++....... ...-+.+-.++..+.. ++-+....
T Consensus 57 ~~~ii~EYf~~~d~~Ea~~~l~eL~~p~~--~~~~v~~~I~~aLdr~--------~~erE~~s~LLs~L~~-~~ls~~~i 125 (358)
T 3eiq_C 57 LTPIIQEYFEHGDTNEVAEMLRDLNLGEM--KSGVPVLAVSLALEGK--------ASHREMTSKLLSDLCG-TVMSTNDV 125 (358)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHTTTCCGG--GGGHHHHHHHHHTTSC--------HHHHHHHHHHHHTTTT-TSCCHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHhCCchh--HHHHHHHHHHHHhcCC--------hHHHHHHHHHHHHHHh-CCCCHHHH
Confidence 45678889999999999999988753221 2222333333222211 4445566666666663 44444444
Q ss_pred HHHHHHHHHh
Q 021791 87 FSIVLHVYSR 96 (307)
Q Consensus 87 ~~~ll~~~~~ 96 (307)
...+...+..
T Consensus 126 ~~gf~~lle~ 135 (358)
T 3eiq_C 126 EKSFDKLLKD 135 (358)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 4444444433
No 273
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=76.33 E-value=16 Score=24.95 Aligned_cols=51 Identities=6% Similarity=0.059 Sum_probs=25.7
Q ss_pred HHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCC
Q 021791 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223 (307)
Q Consensus 173 a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 223 (307)
+.++|..|...++..--+..|..-...+-..|++.+|.++++.-.+.+..|
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P 134 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEP 134 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBS
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc
Confidence 455555555554433444444455555555555555555555555544444
No 274
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=75.79 E-value=39 Score=29.29 Aligned_cols=115 Identities=7% Similarity=-0.061 Sum_probs=57.5
Q ss_pred ChhHHHHHHHHHhhcCCCCccHHHHHH----HHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHH
Q 021791 169 DANGAMKLYRQMKEDDLCVPNIHTYNI----LIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEA 244 (307)
Q Consensus 169 ~~~~a~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a 244 (307)
+++.|...+........ .+...... +.......+...++...+...... .++.......+....+.|+++.|
T Consensus 229 d~~~A~~~~~~~~~~~~--~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~e~~~r~Alr~~d~~~a 304 (618)
T 1qsa_A 229 DAENARLMIPSLAQAQQ--LNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMR--SQSTSLIERRVRMALGTGDRRGL 304 (618)
T ss_dssp CHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHT--CCCHHHHHHHHHHHHHHTCHHHH
T ss_pred CHHHHHHHHHhhhhccC--CCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcccc--CCChHHHHHHHHHHHHCCCHHHH
Confidence 66777777766654432 22222222 222222233244444444443332 22333344444444566777777
Q ss_pred HHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhh
Q 021791 245 CQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDE 288 (307)
Q Consensus 245 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~ 288 (307)
...|..|..... ......--+.+++...|+.++|..+|+.+..
T Consensus 305 ~~~~~~l~~~~~-~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 305 NTWLARLPMEAK-EKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHSCTTGG-GSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHcccccc-ccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 777776644211 1222233345566677777777777776643
No 275
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=74.84 E-value=17 Score=24.73 Aligned_cols=25 Identities=20% Similarity=0.311 Sum_probs=16.1
Q ss_pred HHHHHHHHhcCCChhHHHHHHHHHh
Q 021791 157 YNCFFKEYRGRKDANGAMKLYRQMK 181 (307)
Q Consensus 157 ~~~l~~~~~~~~~~~~a~~~~~~~~ 181 (307)
...++.-|...++.++|.+.++++.
T Consensus 12 i~~lL~EY~~~~D~~EA~~cl~EL~ 36 (152)
T 2ion_A 12 IDMLLKEYLLSGDISEAEHCLKELE 36 (152)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHhC
Confidence 4556666666667777766666664
No 276
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=74.26 E-value=4.6 Score=30.38 Aligned_cols=247 Identities=11% Similarity=0.075 Sum_probs=108.6
Q ss_pred HHHHHHHhcCchhhHHHHHHHHHhcCCCCcH----HHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCH
Q 021791 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNV----VTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84 (307)
Q Consensus 9 ~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~----~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 84 (307)
+.+...++.|+.+.+..++ +.|..++. .-++.|. ..+. .++. ++++.+.+.|..++.
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~~g~t~L~-~A~~----------~g~~----~~v~~Ll~~g~~~~~ 67 (285)
T 1wdy_A 7 HLLIKAVQNEDVDLVQQLL----EGGANVNFQEEEGGWTPLH-NAVQ----------MSRE----DIVELLLRHGADPVL 67 (285)
T ss_dssp HHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTTCCCHHH-HHHH----------TTCH----HHHHHHHHTTCCTTC
T ss_pred hHHHHHHHcCCHHHHHHHH----HcCCCcccccCCCCCcHHH-HHHH----------cCCH----HHHHHHHHcCCCCcc
Confidence 4556667788876555554 44443332 2223333 3334 2333 344455566655442
Q ss_pred HH--HHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhh--HHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHh-----
Q 021791 85 TS--FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT--YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE----- 155 (307)
Q Consensus 85 ~~--~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~----- 155 (307)
.. -...+...+..|+.+ +++.+.+.|..++... -.+.+...+..|+.+-+ +.+.+.|..++..
T Consensus 68 ~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~----~~Ll~~g~~~~~~~~~~~ 139 (285)
T 1wdy_A 68 RKKNGATPFLLAAIAGSVK----LLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL----KFLYKRGANVNLRRKTKE 139 (285)
T ss_dssp CCTTCCCHHHHHHHHTCHH----HHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHH----HHHHHTTCCTTCCCCCCH
T ss_pred cCCCCCCHHHHHHHcCCHH----HHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHH----HHHHHhCCCcccccccHH
Confidence 21 112333444556544 4455555665443221 11233444566766544 4444444443321
Q ss_pred --------hHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHh
Q 021791 156 --------TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDS 227 (307)
Q Consensus 156 --------~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 227 (307)
..+ .+...+..|+.+-+..+++.....-. ..+..-.+.+.. .+..+......++++.+.+.|..++...
T Consensus 140 ~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~g~t~l~~-a~~~~~~~~~~~i~~~Ll~~g~~~~~~~ 216 (285)
T 1wdy_A 140 DQERLRKGGAT-ALMDAAEKGHVEVLKILLDEMGADVN-ACDNMGRNALIH-ALLSSDDSDVEAITHLLLDHGADVNVRG 216 (285)
T ss_dssp HHHHTTCCCCC-HHHHHHHHTCHHHHHHHHHTSCCCTT-CCCTTSCCHHHH-HHHCSCTTTHHHHHHHHHHTTCCSSCCC
T ss_pred HHHhhccCCCc-HHHHHHHcCCHHHHHHHHHhcCCCCC-ccCCCCCCHHHH-HHHccccchHHHHHHHHHHcCCCCCCcC
Confidence 112 23333455666555555443111100 222222233333 3345554444566666666665554321
Q ss_pred --HHHHHHHHHccCcHHHHHHHHHHHHH-cCCCCcHh---hHHHHHHHHhhchhHHHHHHHHHHhhhcCCCCC
Q 021791 228 --YTMLIHGLCEKQKWKEACQYFVEMIE-KGLLPQKV---TFETLYRGLIQSDMLRTWRRLKKKLDEESITFG 294 (307)
Q Consensus 228 --~~~li~~~~~~g~~~~a~~~~~~~~~-~~~~p~~~---~~~~l~~~~~~~g~~~~a~~~~~~~~~~~~~~~ 294 (307)
-...+...+..|+.+- ++.+++ .|..++.. -.+.+ ....+.|..+ +.+.+.+.|..++
T Consensus 217 ~~g~t~L~~A~~~~~~~~----v~~Ll~~~g~~~~~~~~~g~t~l-~~A~~~~~~~----i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 217 ERGKTPLILAVEKKHLGL----VQRLLEQEHIEINDTDSDGKTAL-LLAVELKLKK----IAELLCKRGASTD 280 (285)
T ss_dssp TTSCCHHHHHHHTTCHHH----HHHHHHSSSCCTTCCCTTSCCHH-HHHHHTTCHH----HHHHHHHHSSCSC
T ss_pred CCCCcHHHHHHHcCCHHH----HHHHHhccCCCccccCCCCCcHH-HHHHHcCcHH----HHHHHHHcCCCCC
Confidence 1122333445666544 444444 45444432 12222 2334455554 3444445555544
No 277
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=73.55 E-value=19 Score=24.56 Aligned_cols=55 Identities=11% Similarity=0.135 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhhCCCCCCH-HhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHh
Q 021791 207 DMVREIWNHVKGSELGLDL-DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKV 261 (307)
Q Consensus 207 ~~a~~~~~~~~~~~~~~~~-~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~ 261 (307)
+.+.++|..|...|+.-.. .-|......+-..|++++|.++|+.-++.+-.|-..
T Consensus 82 ~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~~r 137 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEPREF 137 (152)
T ss_dssp SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHH
T ss_pred CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHHH
Confidence 3478888888888766443 447777888888999999999999988887777443
No 278
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=73.21 E-value=32 Score=27.10 Aligned_cols=96 Identities=8% Similarity=0.067 Sum_probs=52.6
Q ss_pred HHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHH
Q 021791 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTS 86 (307)
Q Consensus 7 ~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 86 (307)
-..++.-|...|+.++|.+.++++...... .......+..+.-+ + ....+.+..++..+.+.|+-+....
T Consensus 14 ~~~ll~Ey~~~~d~~Ea~~ci~el~~p~~~-~~~v~~~i~~~le~-~--------~~~re~~~~Ll~~L~~~~~is~~~~ 83 (339)
T 1ug3_A 14 SKAIIEEYLHLNDMKEAVQCVQELASPSLL-FIFVRHGVESTLER-S--------AIAREHMGQLLHQLLCAGHLSTAQY 83 (339)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHTTCCGGGH-HHHHHHHHHHHTTT-C--------HHHHHHHHHHHHHHHHTTSSCHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHcCCcccH-HHHHHHHHHHHhCC-C--------HHHHHHHHHHHHHHHHCCCCCHHHH
Confidence 467889999999999999999888532111 11222222222222 1 3445677788888887765444333
Q ss_pred HHHHHHHHHhcC----CchhHHHHHHHHHH
Q 021791 87 FSIVLHVYSRAH----KPQLSLDKLNFMKE 112 (307)
Q Consensus 87 ~~~ll~~~~~~~----~~~~a~~~~~~~~~ 112 (307)
...+-+.+.... |.-.|...+..+..
T Consensus 84 ~~Gf~~~~~~l~Dl~lDiP~a~~~La~~v~ 113 (339)
T 1ug3_A 84 YQGLYEILELAEDMEIDIPHVWLYLAELVT 113 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCTTHHHHHHHHHG
T ss_pred HHHHHHHHhhChHhhcCccchHHHHHHHHH
Confidence 222222222211 44455566555543
No 279
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=70.39 E-value=30 Score=25.60 Aligned_cols=89 Identities=10% Similarity=-0.010 Sum_probs=48.3
Q ss_pred HHHHHHHhcCchhhHHHHHHHHHhc--CCCC----cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCC
Q 021791 9 SLIYGWCKINRIDMAERFLGEMIER--GVEP----NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEP 82 (307)
Q Consensus 9 ~li~~~~~~g~~~~a~~~~~~~~~~--~~~p----~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 82 (307)
--++.+....++++|.+++++..+. +.++ ........+..-.. ...-.-+..+.+++. . .+
T Consensus 23 deLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~----------eR~~~L~~~L~~~l~-~--~~ 89 (235)
T 2d2s_A 23 EEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIE----------QRREAISSKLSQSIL-S--SN 89 (235)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHH----------HHHHHHHHHHHHHHH-T--CS
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHH----------HHHHHHHHHHHHHHH-h--cC
Confidence 3567788899999999999887653 2332 11222222332222 222223333344442 2 34
Q ss_pred CHHHHHHHHHHHHhcCCchhHHHHHHHH
Q 021791 83 DVTSFSIVLHVYSRAHKPQLSLDKLNFM 110 (307)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~a~~~~~~~ 110 (307)
+.......+..+.+.|+.++|.++|-+.
T Consensus 90 ~~~~~r~~v~~L~rLg~~~~A~~lfL~~ 117 (235)
T 2d2s_A 90 EIVHLKSGTENMIKLGLPEQALDLFLQN 117 (235)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCChhHHHHHHHHH
Confidence 5555566666777777777777766544
No 280
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=69.50 E-value=15 Score=26.73 Aligned_cols=25 Identities=8% Similarity=0.037 Sum_probs=13.3
Q ss_pred HHHHHhcCchhhHHHHHHHHHhcCC
Q 021791 11 IYGWCKINRIDMAERFLGEMIERGV 35 (307)
Q Consensus 11 i~~~~~~g~~~~a~~~~~~~~~~~~ 35 (307)
+...+..|+.+.+..+++.+.+.|.
T Consensus 13 L~~A~~~g~~~~v~~Ll~~~~~~~~ 37 (241)
T 1k1a_A 13 LHIAVVQGNLPAVHRLVNLFQQGGR 37 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 3444455666666666555544443
No 281
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=69.27 E-value=25 Score=24.29 Aligned_cols=50 Identities=10% Similarity=0.133 Sum_probs=21.7
Q ss_pred HHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCC
Q 021791 174 MKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL 223 (307)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 223 (307)
..+|..|...++..--...|..-...+-..|++.+|.+++..-.+.+..|
T Consensus 80 ~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P 129 (164)
T 2wvi_A 80 LDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEP 129 (164)
T ss_dssp HHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBS
T ss_pred HHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 33444444444333333344444444444444444444444444443333
No 282
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=67.36 E-value=21 Score=24.96 Aligned_cols=180 Identities=11% Similarity=-0.040 Sum_probs=76.4
Q ss_pred HHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHh---hHHHHHHHHhcCCC
Q 021791 93 VYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAE---TYNCFFKEYRGRKD 169 (307)
Q Consensus 93 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~ 169 (307)
..+..|+.+....++..-...--..+..-++ .+...+..|+.+-+. .+.+.|..++.. ..+.+. ..+..|+
T Consensus 11 ~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t-~L~~A~~~~~~~~v~----~Ll~~g~~~~~~~~~g~t~l~-~A~~~~~ 84 (201)
T 3hra_A 11 EAANQRDTKKVKEILQDTTYQVDEVDTEGNT-PLNIAVHNNDIEIAK----ALIDRGADINLQNSISDSPYL-YAGAQGR 84 (201)
T ss_dssp HHHHTTCHHHHHHHHTCTTCCTTCCCTTSCC-HHHHHHHHTCHHHHH----HHHHTTCCTTCCCTTSCCHHH-HHHHTTC
T ss_pred HHHHhccHHHHHHHHHcCCCCCCCCCCCCCC-HHHHHHHcCCHHHHH----HHHHcCCCCCCCCCCCCCHHH-HHHHcCC
Confidence 3445666666555553221000011222222 334445566655443 344445444322 222333 3345566
Q ss_pred hhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHH-hhCCCCCCHHhHHHHHHHHHccCcHHHHHHHH
Q 021791 170 ANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHV-KGSELGLDLDSYTMLIHGLCEKQKWKEACQYF 248 (307)
Q Consensus 170 ~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~ 248 (307)
.+-+..+++.....-. ..+..-.+. +...+..|+.+.+..+++.- ...+ ..+..-.+.+..+.........-.++.
T Consensus 85 ~~~~~~Ll~~~~~~~~-~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 85 TEILAYMLKHATPDLN-KHNRYGGNA-LIPAAEKGHIDNVKLLLEDGREDID-FQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp HHHHHHHHHHSCCCTT-CCCTTSCCS-HHHHHHTTCHHHHHHHHHHCCCCTT-CCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred HHHHHHHHhccCcccc-cccCCCCcH-HHHHHHcCCHHHHHHHHHcCCCCcC-CCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 6655555543221110 122211122 33445667777666666553 1111 113323334444433322233345666
Q ss_pred HHHHHcCCCCcHhhHH--HHHHHHhhchhHHHHHH
Q 021791 249 VEMIEKGLLPQKVTFE--TLYRGLIQSDMLRTWRR 281 (307)
Q Consensus 249 ~~~~~~~~~p~~~~~~--~l~~~~~~~g~~~~a~~ 281 (307)
+.+++.|..++..... .-+......|..+-+.-
T Consensus 162 ~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~ 196 (201)
T 3hra_A 162 KLLMENGADQSIKDNSGRTAMDYANQKGYTEISKI 196 (201)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHH
Confidence 7777777666543211 12333344555544443
No 283
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=67.22 E-value=16 Score=26.76 Aligned_cols=51 Identities=10% Similarity=0.103 Sum_probs=21.7
Q ss_pred HHHHHHHHHhhCCCCCC-HHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCC
Q 021791 208 MVREIWNHVKGSELGLD-LDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP 258 (307)
Q Consensus 208 ~a~~~~~~~~~~~~~~~-~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p 258 (307)
.+..+|..|...|+.-. ..-|......+-..|++.+|..+|+.-++.+-.|
T Consensus 132 ~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P 183 (223)
T 4aez_C 132 EPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAKP 183 (223)
T ss_dssp CHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCBS
T ss_pred CHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc
Confidence 33344444444433322 1223444444444445555555554444444443
No 284
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=66.70 E-value=43 Score=25.98 Aligned_cols=73 Identities=7% Similarity=0.085 Sum_probs=45.3
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccC--cHHHHHHHHHHHHHcCCCCcHhhHHHH
Q 021791 193 YNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ--KWKEACQYFVEMIEKGLLPQKVTFETL 266 (307)
Q Consensus 193 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g--~~~~a~~~~~~~~~~~~~p~~~~~~~l 266 (307)
...++.-|...|+.++|.+.++++..-... ...+...+..++-+.+ ..+....++..+.+.|+-+.......+
T Consensus 169 i~~lL~EY~~~~D~~EA~~ci~EL~~p~f~-~e~V~~ai~~alE~~~~~~re~~~~LL~~L~~~~~ls~~q~~~Gf 243 (307)
T 2zu6_B 169 IDMLLKEYLLSGDISEAEHCLKELEVPHFH-HELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITVDQMKRGY 243 (307)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHCCGGGH-HHHHHHHHHHHHTCCSSHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHcCCCcch-HHHHHHHHHHHHccCChHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Confidence 457788888889999999998888632111 1223344444554433 256677888888877765555443333
No 285
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=65.15 E-value=30 Score=26.19 Aligned_cols=191 Identities=7% Similarity=0.013 Sum_probs=88.9
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhh--HHHHHHHHHhcCChHHHHHHHHHHHhCC
Q 021791 72 FDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT--YTSVVKCLCSCGRIEDAEELLGEMVRNG 149 (307)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~ll~~~~~~~~~~~a~~~~~~~~~~~ 149 (307)
++.+.+.|..++...-.+.+...+..|+.+-+. .+.+.|..++... -.+.+...+..|+.+-+..+++. |
T Consensus 47 v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~----~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~----g 118 (285)
T 3kea_A 47 VCTLLNAGALKNLLENEFPLHQAATLEDTKIVK----ILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK----N 118 (285)
T ss_dssp HHHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHH----HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH----C
T ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHH----HHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc----C
Confidence 344445554443322233455556677765444 4445565443221 11234445567777655555543 4
Q ss_pred CCCCH---hhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHH
Q 021791 150 VSPSA---ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLD 226 (307)
Q Consensus 150 ~~~~~---~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 226 (307)
..++. .-+.+.+...+..|+.+-+..++ +.+....+...-...+...+..|..+-+..+++.-...+.. +..
T Consensus 119 a~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~-~~~ 193 (285)
T 3kea_A 119 WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFL----SEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTN-NSL 193 (285)
T ss_dssp GGGGGCSSSGGGSHHHHHHHTTCHHHHHHHH----TTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTT-CCC
T ss_pred CCCCccCCCCCCCHHHHHHHcCCHHHHHHHH----hCCCccccccCCccHHHHHHHcChHHHHHHHHHcCCCCCcc-cCC
Confidence 33332 22123344445566665444333 33321222212233445556778888777777654332211 211
Q ss_pred hHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHH
Q 021791 227 SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKK 284 (307)
Q Consensus 227 ~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~ 284 (307)
-.+..+...+..|+. ++.+.+++.|..|+..... -...|+.+-+.-+++
T Consensus 194 g~t~~L~~A~~~~~~----~~v~~Ll~~gad~~~~~~~-----a~~~~~~~iv~~Ll~ 242 (285)
T 3kea_A 194 LFIPDIKLAIDNKDI----EMLQALFKYDINIYSANLE-----NVLLDDAEIAKMIIE 242 (285)
T ss_dssp BCCTTHHHHHHHTCH----HHHHHHTTSCBCSTTTTGG-----GGTTTCHHHHHHHHH
T ss_pred CCChHHHHHHHcCCH----HHHHHHHHcCCCCCCCChh-----hhhcCCHHHHHHHHH
Confidence 122222333345553 4555566677777765421 133555554444444
No 286
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=64.89 E-value=40 Score=24.94 Aligned_cols=90 Identities=11% Similarity=0.028 Sum_probs=46.8
Q ss_pred HHHHHHhcCChHHHHHHHHHHHhC--CCCC----CHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHH
Q 021791 125 VVKCLCSCGRIEDAEELLGEMVRN--GVSP----SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIG 198 (307)
Q Consensus 125 ll~~~~~~~~~~~a~~~~~~~~~~--~~~~----~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (307)
-+..+....++++|..++++.... +.++ ........+..-.....-.-+..+.+++.. .++.......+.
T Consensus 24 eLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l~~----~~~~~~~r~~v~ 99 (235)
T 2d2s_A 24 EIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILS----SNEIVHLKSGTE 99 (235)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHT----CSSHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCHHHHHHHHH
Confidence 466777788888888888776542 2221 111122222222222222333334444422 234455556666
Q ss_pred HHHhcCcHHHHHHHHHHHhh
Q 021791 199 MFMALNRMDMVREIWNHVKG 218 (307)
Q Consensus 199 ~~~~~~~~~~a~~~~~~~~~ 218 (307)
.+.+.|+.++|.++|-+...
T Consensus 100 ~L~rLg~~~~A~~lfL~~rs 119 (235)
T 2d2s_A 100 NMIKLGLPEQALDLFLQNRS 119 (235)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHCCChhHHHHHHHHHHH
Confidence 77777777777777765554
No 287
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=63.86 E-value=30 Score=23.18 Aligned_cols=32 Identities=9% Similarity=0.005 Sum_probs=12.5
Q ss_pred CChHHHHHHHHHHHhCCCCCCHhhHHHHHHHH
Q 021791 133 GRIEDAEELLGEMVRNGVSPSAETYNCFFKEY 164 (307)
Q Consensus 133 ~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (307)
+..-.|.++++.+.+.+...+..|...-+..+
T Consensus 35 ~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L 66 (145)
T 2fe3_A 35 MAHPTADDIYKALEGKFPNMSVATVYNNLRVF 66 (145)
T ss_dssp SSCCCHHHHHHHHGGGCTTCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCCCChhhHHHHHHHH
Confidence 33334444444444433333333333333333
No 288
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=63.80 E-value=31 Score=23.31 Aligned_cols=13 Identities=15% Similarity=0.138 Sum_probs=5.1
Q ss_pred hHHHHHHHHHHHh
Q 021791 135 IEDAEELLGEMVR 147 (307)
Q Consensus 135 ~~~a~~~~~~~~~ 147 (307)
.-.|.++++.+.+
T Consensus 42 ~~sa~ei~~~l~~ 54 (150)
T 2xig_A 42 HLSPEEITHSIRQ 54 (150)
T ss_dssp CBCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 3334444444433
No 289
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=63.10 E-value=34 Score=23.62 Aligned_cols=56 Identities=14% Similarity=0.262 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhhCCCCCCH-HhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhh
Q 021791 207 DMVREIWNHVKGSELGLDL-DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT 262 (307)
Q Consensus 207 ~~a~~~~~~~~~~~~~~~~-~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~ 262 (307)
+.+..+|..|...|+.-.. .-|......+-..|++.+|.++|+.-++.+-.|-...
T Consensus 77 ~~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P~~~L 133 (164)
T 2wvi_A 77 NEPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLERL 133 (164)
T ss_dssp SCHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHHH
T ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHH
Confidence 3477889999988776543 4477788888899999999999999999988886643
No 290
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=62.07 E-value=57 Score=27.53 Aligned_cols=65 Identities=9% Similarity=0.070 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhcCchhhHHHHHHHHHhc-CCCCcH--HHHHHHH-HHHHhhCCCCcchhhHHHHHHHHHHHHHHHhc
Q 021791 4 VKMYTSLIYGWCKINRIDMAERFLGEMIER-GVEPNV--VTYNVLL-NGVCRRASLHPNERFEKTIRNAEKVFDEMRVR 78 (307)
Q Consensus 4 ~~~~~~li~~~~~~g~~~~a~~~~~~~~~~-~~~p~~--~~~~~ll-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 78 (307)
+..+|.+++.|...+.++.|..+.....-- ...++. .+|...+ +.+.- .+++.+|.+.+......
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~----------q~~Y~eA~~~L~~A~rk 299 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAI----------QLDYSTANEYIIAAIRK 299 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHH----------hccHHHHHHHHHHHHHh
Confidence 467899999999999999999999887421 001121 1222111 22222 66788898888887665
No 291
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=61.97 E-value=44 Score=24.46 Aligned_cols=83 Identities=11% Similarity=0.139 Sum_probs=58.4
Q ss_pred HHHHHHHHHhC-----CCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHH
Q 021791 138 AEELLGEMVRN-----GVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREI 212 (307)
Q Consensus 138 a~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~ 212 (307)
-..++++.... ..+-|.......+. |+.. .+....+|..|...++..--...|..-...+-..|++.+|.++
T Consensus 96 L~~lLErc~~~F~~~~rYknD~RyLklWl~-Ya~~--~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~V 172 (223)
T 4aez_C 96 LVTLLERCTREFVRNPLYKDDVRYLRIWMQ-YVNY--IDEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEV 172 (223)
T ss_dssp HHHHHHHHHHHTTTCGGGTTCHHHHHHHHH-HHTT--CSCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccCCHHHHHHHHH-HHHc--cCCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 34555555443 22334444444443 3332 3577789999999887667778888888899999999999999
Q ss_pred HHHHhhCCCCC
Q 021791 213 WNHVKGSELGL 223 (307)
Q Consensus 213 ~~~~~~~~~~~ 223 (307)
|+.-.+.+..|
T Consensus 173 y~~Gi~~~A~P 183 (223)
T 4aez_C 173 YQKGKRMKAKP 183 (223)
T ss_dssp HHHHHHHTCBS
T ss_pred HHHHHHcCCcc
Confidence 99988887776
No 292
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=60.90 E-value=32 Score=22.55 Aligned_cols=72 Identities=11% Similarity=0.057 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHH
Q 021791 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVT 85 (307)
Q Consensus 6 ~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 85 (307)
.-+.++.-|...|+.++|.+.++++..... -.......+..++-+.+ ....+.+.+++..+...|+-+...
T Consensus 9 ki~~ll~EY~~~~D~~Ea~~cl~eL~~p~f-~~e~V~~~i~~alE~~~--------~~~~e~~~~LL~~L~~~~~is~~q 79 (129)
T 2nsz_A 9 EIDMLLKEYLLSGDISEAEHCLKELEVPHF-HHELVYEAIVMVLESTG--------ESAFKMILDLLKSLWKSSTITIDQ 79 (129)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTCGGG-HHHHHHHHHHHHHHCCS--------SHHHHHHHHHHHHHHHTTCSCHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhCCCcc-HHHHHHHHHHHHHcCCC--------hHHHHHHHHHHHHHHHCCCcCHHH
Confidence 346788999999999999999999853211 12223333443444311 134466777777777776554443
Q ss_pred H
Q 021791 86 S 86 (307)
Q Consensus 86 ~ 86 (307)
.
T Consensus 80 ~ 80 (129)
T 2nsz_A 80 M 80 (129)
T ss_dssp H
T ss_pred H
Confidence 3
No 293
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=60.83 E-value=28 Score=21.79 Aligned_cols=85 Identities=12% Similarity=0.101 Sum_probs=41.9
Q ss_pred CchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHH
Q 021791 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178 (307)
Q Consensus 99 ~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~ 178 (307)
..++|.-+-+.+...+. ...+--+-+..+...|++++|..+.+.. +.||...|..+-. .+.|..+++..-+.
T Consensus 21 ~HqEA~tIAdwL~~~~~--~E~v~lIR~sSLmNrG~Yq~Al~l~~~~----c~pdlepw~ALce--~rlGl~s~le~rL~ 92 (115)
T 2uwj_G 21 CHEEALCIAEWLERLGQ--DEAARLIRISSLANQGRYQEALAFAHGN----PWPALEPWFALCE--WHLGLGAALDRRLA 92 (115)
T ss_dssp CHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHTTCHHHHHGGGTTC----CCGGGHHHHHHHH--HHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCc--HHHHHHHHHHHHHcchhHHHHHHhcCCC----CCchHHHHHHHHH--HhcccHHHHHHHHH
Confidence 34555555555554432 2222222233445566666665554333 3456665554433 45566666666665
Q ss_pred HHhhcCCCCccHHHH
Q 021791 179 QMKEDDLCVPNIHTY 193 (307)
Q Consensus 179 ~~~~~~~~~~~~~~~ 193 (307)
.+..++ .|....|
T Consensus 93 ~la~sg--~p~~q~F 105 (115)
T 2uwj_G 93 GLGGSS--DPALADF 105 (115)
T ss_dssp HHHTCS--SHHHHHH
T ss_pred HHHhCC--CHHHHHH
Confidence 555555 3444444
No 294
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=59.84 E-value=59 Score=25.27 Aligned_cols=127 Identities=9% Similarity=-0.046 Sum_probs=66.0
Q ss_pred HHHHHHHcCCCCchhhHHHHHHHHHhcCChH-HHHHHHHHHH----hCC--CCCCHhhHHHHHHHHhcCCChhHHHHHHH
Q 021791 106 KLNFMKEKGICPTVATYTSVVKCLCSCGRIE-DAEELLGEMV----RNG--VSPSAETYNCFFKEYRGRKDANGAMKLYR 178 (307)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-~a~~~~~~~~----~~~--~~~~~~~~~~l~~~~~~~~~~~~a~~~~~ 178 (307)
+++-..+.+.+++......++..+.....-+ .=..+++.+. +.| ..-++.....+...|.+.+++.+|..-|-
T Consensus 79 lvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 79 LLEVYDLAEVKVDDISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHHHHHHTTCCCSHHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 3455555677777777777777666543211 1123333333 222 22356677777788888888877776554
Q ss_pred HHhhcCCCCccHHHHHHHHHHHHhc---CcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHH
Q 021791 179 QMKEDDLCVPNIHTYNILIGMFMAL---NRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMI 252 (307)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~ 252 (307)
.-. ..+...+..++.-+... |...++-- ..-..++ .|...|+...|..+++...
T Consensus 159 ~~~-----~~s~~~~a~~l~~w~~~~~~~~~~e~dl--------------f~~RaVL-~yL~l~n~~~A~~~~~~f~ 215 (312)
T 2wpv_A 159 LGT-----HDSMIKYVDLLWDWLCQVDDIEDSTVAE--------------FFSRLVF-NYLFISNISFAHESKDIFL 215 (312)
T ss_dssp TSC-----HHHHHHHHHHHHHHHHHTTCCCHHHHHH--------------HHHHHHH-HHHHTTBHHHHHHHHHHHH
T ss_pred hCC-----CccHHHHHHHHHHHHHhcCCCCcchHHH--------------HHHHHHH-HHHHhcCHHHHHHHHHHHH
Confidence 111 11344555554444433 33322211 1112222 3445677777777777664
No 295
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=59.53 E-value=30 Score=21.70 Aligned_cols=85 Identities=13% Similarity=0.103 Sum_probs=40.5
Q ss_pred CchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHH
Q 021791 99 KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYR 178 (307)
Q Consensus 99 ~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~ 178 (307)
..++|.-+-+.+...+. ...+--+-+..+...|++++|..+.+.. +.||...|..+-. .+.|..+++..-+.
T Consensus 22 ~HqEA~tIAdwL~~~~~--~E~v~lIR~sSLmNrG~Yq~Al~l~~~~----c~pdlepw~ALce--~rlGl~s~le~rL~ 93 (116)
T 2p58_C 22 YHEEANCIAEWLHLKGE--EEAVQLIRLSSLMNRGDYASALQQGNKL----AYPDLEPWLALCE--YRLGLGSALESRLN 93 (116)
T ss_dssp CHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHTTCHHHHHHHHTTS----CCGGGHHHHHHHH--HHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCc--HHHHHHHHHHHHHcchhHHHHHHhcCCC----CCchHHHHHHHHH--HhcccHHHHHHHHH
Confidence 34555555555544432 2222222233345566666665554433 2455555554433 34555555555555
Q ss_pred HHhhcCCCCccHHHH
Q 021791 179 QMKEDDLCVPNIHTY 193 (307)
Q Consensus 179 ~~~~~~~~~~~~~~~ 193 (307)
.+..++ .|....|
T Consensus 94 ~la~sg--~p~~q~F 106 (116)
T 2p58_C 94 RLARSQ--DPRIQTF 106 (116)
T ss_dssp HHTTCC--CHHHHHH
T ss_pred HHHhCC--CHHHHHH
Confidence 555554 3444433
No 296
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=58.69 E-value=60 Score=25.42 Aligned_cols=220 Identities=10% Similarity=0.038 Sum_probs=106.2
Q ss_pred CcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHH--HHHHHHHHHhcCCchhHHHHHHHHHHcC
Q 021791 37 PNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTS--FSIVLHVYSRAHKPQLSLDKLNFMKEKG 114 (307)
Q Consensus 37 p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~ll~~~~~~~~~~~a~~~~~~~~~~~ 114 (307)
.|..-++.|..++. .|+.+- ++.+.+.|..++... -...+...+..|+.+- .+.+.+.|
T Consensus 16 ~d~~g~t~L~~Aa~-----------~g~~~~----v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~----v~~Ll~~g 76 (364)
T 3ljn_A 16 SDDENMEKIHVAAR-----------KGQTDE----VRRLIETGVSPTIQNRFGCTALHLACKFGCVDT----AKYLASVG 76 (364)
T ss_dssp CCHHHHHHHHHHHH-----------HTCHHH----HHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHH----HHHHHHHC
T ss_pred cCCCCCCHHHHHHH-----------cCCHHH----HHHHHHcCCCccccCCCCCcHHHHHHHcCCHHH----HHHHHHCC
Confidence 45555666665544 344443 344445565444321 1223444555666544 44444455
Q ss_pred CCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCH--------------------hhHHHHHHHHhcCC--ChhH
Q 021791 115 ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA--------------------ETYNCFFKEYRGRK--DANG 172 (307)
Q Consensus 115 ~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~--------------------~~~~~l~~~~~~~~--~~~~ 172 (307)
..++...-.+.+...+..|+.+-+..+++.....|..++. .-.+.|.. .+..| +.+-
T Consensus 77 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~-A~~~g~~~~~~ 155 (364)
T 3ljn_A 77 EVHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHW-CVGLGPEYLEM 155 (364)
T ss_dssp CCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHH-HHHSCGGGHHH
T ss_pred CCccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHH-HHHcCCchHHH
Confidence 4444422233455566778888888777775544444332 12233333 34455 5554
Q ss_pred HHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhh-CCCCC---CHHhHHHHHHHHHccCcHHHHHHHH
Q 021791 173 AMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKG-SELGL---DLDSYTMLIHGLCEKQKWKEACQYF 248 (307)
Q Consensus 173 a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~-~~~~~---~~~~~~~li~~~~~~g~~~~a~~~~ 248 (307)
+..+++.-...+ ..|..-.+. +...+..|+.+.+..+++.-.. .+..+ +..-.+.|. ..+..|+.+ +.
T Consensus 156 v~~Ll~~ga~~~--~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~-~A~~~g~~~----~v 227 (364)
T 3ljn_A 156 IKILVQLGASPT--AKDKADETP-LMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLH-WAILINWED----VA 227 (364)
T ss_dssp HHHHHHHTCCTT--CCCTTSCCH-HHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTH-HHHTTTCHH----HH
T ss_pred HHHHHHcCCCCc--ccCCCCCCH-HHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHH-HHHHcCCHH----HH
Confidence 444444421111 222222233 3344567888777777765332 00001 222222232 334566654 44
Q ss_pred HHHHHcCCCCcHhh---HHHHHHHHhhchhHHHHHHHHHH
Q 021791 249 VEMIEKGLLPQKVT---FETLYRGLIQSDMLRTWRRLKKK 285 (307)
Q Consensus 249 ~~~~~~~~~p~~~~---~~~l~~~~~~~g~~~~a~~~~~~ 285 (307)
+.+++.|..++... .+.| ......|..+-+..+++.
T Consensus 228 ~~Ll~~gad~~~~d~~g~tpL-~~A~~~g~~~~v~~Ll~~ 266 (364)
T 3ljn_A 228 MRFVEMGIDVNMEDNEHTVPL-YLSVRAAMVLLTKELLQK 266 (364)
T ss_dssp HHHHTTTCCTTCCCTTSCCHH-HHHHHTCCHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCCCCCCCHH-HHHHHhChHHHHHHHHHc
Confidence 55556676555432 2233 334556777777777765
No 297
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=58.68 E-value=26 Score=26.08 Aligned_cols=200 Identities=11% Similarity=0.061 Sum_probs=92.1
Q ss_pred HHHHHHhcCCCCCHH---HHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhh--HHHHHHHHHhcCChHHHHHHHHHH
Q 021791 71 VFDEMRVRGIEPDVT---SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT--YTSVVKCLCSCGRIEDAEELLGEM 145 (307)
Q Consensus 71 ~~~~~~~~~~~~~~~---~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~ll~~~~~~~~~~~a~~~~~~~ 145 (307)
+++.+.+.|..++.. .-...+...+..|+.+ +++.+.+.|..++... -.+.+...+..|+.+-+ +.+
T Consensus 20 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~----~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v----~~L 91 (285)
T 1wdy_A 20 LVQQLLEGGANVNFQEEEGGWTPLHNAVQMSRED----IVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLL----KLF 91 (285)
T ss_dssp HHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHH----HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH----HHH
T ss_pred HHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHH----HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHH----HHH
Confidence 344455555444322 1123455556667654 4445556665544221 11234444566766544 444
Q ss_pred HhCCCCCCH---hhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCc--------cHHHHHHHHHHHHhcCcHHHHHHHHH
Q 021791 146 VRNGVSPSA---ETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP--------NIHTYNILIGMFMALNRMDMVREIWN 214 (307)
Q Consensus 146 ~~~~~~~~~---~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~a~~~~~ 214 (307)
.+.|..++. ..++.+ ...+..|+.+-+..+++.-........ +..- ...+...+..|+.+.+..+++
T Consensus 92 l~~g~~~~~~~~~g~t~L-~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g-~t~L~~A~~~~~~~~v~~Ll~ 169 (285)
T 1wdy_A 92 LSKGADVNECDFYGFTAF-MEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGG-ATALMDAAEKGHVEVLKILLD 169 (285)
T ss_dssp HHTTCCTTCBCTTCCBHH-HHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCC-CCHHHHHHHHTCHHHHHHHHH
T ss_pred HHcCCCCCccCcccCCHH-HHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCC-CcHHHHHHHcCCHHHHHHHHH
Confidence 445544432 222233 334456666554444443221111000 0001 123444556777776666655
Q ss_pred HHhhCCCCC---CHHhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhh--HHHHHHHHhhchhHHHHHHHHH
Q 021791 215 HVKGSELGL---DLDSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT--FETLYRGLIQSDMLRTWRRLKK 284 (307)
Q Consensus 215 ~~~~~~~~~---~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~--~~~l~~~~~~~g~~~~a~~~~~ 284 (307)
.. |..+ +....+.+..+ +..+.......+++.+.+.|..++... -...+......|..+-+..+++
T Consensus 170 ~~---~~~~~~~~~~g~t~l~~a-~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 240 (285)
T 1wdy_A 170 EM---GADVNACDNMGRNALIHA-LLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE 240 (285)
T ss_dssp TS---CCCTTCCCTTSCCHHHHH-HHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred hc---CCCCCccCCCCCCHHHHH-HHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 31 2222 22223333333 344554455677777778877665432 1123334455677766665554
No 298
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=57.86 E-value=37 Score=22.93 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=15.8
Q ss_pred ChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCC
Q 021791 134 RIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168 (307)
Q Consensus 134 ~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (307)
..-.|.++++.+.+.+...+..|...-+..+...|
T Consensus 32 ~h~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~G 66 (150)
T 2w57_A 32 QHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAG 66 (150)
T ss_dssp SSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCC
Confidence 34445555555554444444444444444444443
No 299
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=57.73 E-value=33 Score=22.62 Aligned_cols=21 Identities=14% Similarity=0.205 Sum_probs=8.4
Q ss_pred hHHHHHHHHHHHhCCCCCCHh
Q 021791 135 IEDAEELLGEMVRNGVSPSAE 155 (307)
Q Consensus 135 ~~~a~~~~~~~~~~~~~~~~~ 155 (307)
.-.|.++++.+.+.+...+..
T Consensus 34 ~~sa~ei~~~l~~~~~~is~a 54 (136)
T 1mzb_A 34 HMSAEDVYKALMEAGEDVGLA 54 (136)
T ss_dssp SBCHHHHHHHHHHTTCCCCHH
T ss_pred CCCHHHHHHHHHhhCCCCCHH
Confidence 334444444444433333333
No 300
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=57.49 E-value=42 Score=22.80 Aligned_cols=72 Identities=11% Similarity=0.057 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHH
Q 021791 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVT 85 (307)
Q Consensus 6 ~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 85 (307)
.-+.++.-|...|+.++|.+.++++..... ........+..++-+.+ ....+.+..++..+...|+-+...
T Consensus 11 ki~~lL~EY~~~~D~~EA~~cl~EL~~p~f-~~e~V~~~i~~alE~~~--------~~~re~~~~LL~~L~~~~~is~~q 81 (152)
T 2ion_A 11 EIDMLLKEYLLSGDISEAEHCLKELEVPHF-HHELVYEAIVMVLESTG--------ESAFKMILDLLKSLWKSSTITIDQ 81 (152)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTCGGG-HHHHHHHHHHHHHHCCS--------SHHHHHHHHHHHHHHHTTCSCHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHcCCC--------hHHHHHHHHHHHHHHHCCCcCHHH
Confidence 346788899999999999999999853211 12223333333443311 233466777777777766554433
Q ss_pred H
Q 021791 86 S 86 (307)
Q Consensus 86 ~ 86 (307)
.
T Consensus 82 ~ 82 (152)
T 2ion_A 82 M 82 (152)
T ss_dssp H
T ss_pred H
Confidence 3
No 301
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=57.39 E-value=47 Score=23.31 Aligned_cols=38 Identities=8% Similarity=-0.014 Sum_probs=25.5
Q ss_pred CCCCcHhhHH--HHHHHHhhchhHHHHHHHHHHhhhcCCC
Q 021791 255 GLLPQKVTFE--TLYRGLIQSDMLRTWRRLKKKLDEESIT 292 (307)
Q Consensus 255 ~~~p~~~~~~--~l~~~~~~~g~~~~a~~~~~~~~~~~~~ 292 (307)
+..|...+|. .....+...|..++.+.+|..+++.+..
T Consensus 201 n~iPGiGSY~va~aa~~yf~lg~~d~s~~lf~~lR~kDP~ 240 (242)
T 3kae_A 201 EHVPGIGSYFISNAARRYFNLGMNDKSKACFELVRRKDPM 240 (242)
T ss_dssp TSTTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HhCCCchhHHHHHHHHHHHhcccchhHHHHHHHHHhcCCC
Confidence 3456655543 2344567788888888888888776654
No 302
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=57.24 E-value=20 Score=18.90 Aligned_cols=46 Identities=9% Similarity=0.168 Sum_probs=26.8
Q ss_pred CcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHh
Q 021791 239 QKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286 (307)
Q Consensus 239 g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~ 286 (307)
.+...|+++++++.+.|-.|+... . -++--.++.-....+++++.+
T Consensus 7 RDv~RaiELle~lq~sgevp~~KL-~-aLq~VLqSdF~~aVREVYEhv 52 (53)
T 1zl8_A 7 RDVQRILELMEHVQKTGEVNNAKL-A-SLQQVLQSEFFGAVREVYETV 52 (53)
T ss_dssp HHHHHHHHHHHHHGGGSSSTHHHH-H-HHHHHHSCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCcHHH-H-HHHHHHHHHHHHHHHHHHHHc
Confidence 356777778887777776555432 1 133334555566666666543
No 303
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=56.86 E-value=15 Score=20.32 Aligned_cols=29 Identities=21% Similarity=0.359 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHcCCCCcHhhHHHHHHHH
Q 021791 242 KEACQYFVEMIEKGLLPQKVTFETLYRGL 270 (307)
Q Consensus 242 ~~a~~~~~~~~~~~~~p~~~~~~~l~~~~ 270 (307)
++|.+.|.+|++..-.++..||...++.+
T Consensus 3 eEae~aF~~lL~~~~V~s~wsweqamr~i 31 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTWSFSRIISEL 31 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCcHHHHHHHh
Confidence 46677777776654444556777777666
No 304
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=56.00 E-value=29 Score=23.28 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=13.9
Q ss_pred hHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhc
Q 021791 135 IEDAEELLGEMVRNGVSPSAETYNCFFKEYRG 166 (307)
Q Consensus 135 ~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (307)
.-.|.++++.+.+.+...+..|...-+..+..
T Consensus 33 h~ta~ei~~~l~~~~~~is~~TVYR~L~~L~e 64 (145)
T 3eyy_A 33 HATPDDILGEVRKTASGINISTVYRTLELLEE 64 (145)
T ss_dssp SBCHHHHHHHHHTTCTTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhhCCCCCHhHHHHHHHHHHH
Confidence 34455555555444444444433333333333
No 305
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=55.29 E-value=19 Score=26.04 Aligned_cols=147 Identities=7% Similarity=0.012 Sum_probs=63.6
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHcCCCCchhh--HHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCH---hhHHHHHHHH
Q 021791 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT--YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA---ETYNCFFKEY 164 (307)
Q Consensus 90 ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~---~~~~~l~~~~ 164 (307)
.+...+..|+.+ +++.+.+.|..++... -...+...+..|+.+-+ +.+.+.|..++. ...+.+..+.
T Consensus 79 ~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~----~~Ll~~~~~~~~~~~~g~t~l~~a~ 150 (240)
T 3eu9_A 79 PLHWATRQGHLS----MVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIV----AYLIAKGQDVDMMDQNGMTPLMWAA 150 (240)
T ss_dssp HHHHHHHHTCHH----HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH----HHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred hhHHHHHcCCHH----HHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHH----HHHHhcCCCccccCCCCCcHHHHHH
Confidence 344445566654 4444555565444221 11234445566776544 444444444332 2223344333
Q ss_pred hcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhH--HHHHHHHHccCcHH
Q 021791 165 RGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSY--TMLIHGLCEKQKWK 242 (307)
Q Consensus 165 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~--~~li~~~~~~g~~~ 242 (307)
.. +......+++.+....-. ..+...-...+...+..|+.+.+..+++. |..++.... ..-+....+.|+.+
T Consensus 151 ~~-~~~~~~~~~L~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~l~~A~~~~~~~ 224 (240)
T 3eu9_A 151 YR-THSVDPTRLLLTFNVSVN-LGDKYHKNTALHWAVLAGNTTVISLLLEA----GANVDAQNIKGESALDLAKQRKNVW 224 (240)
T ss_dssp HH-CCSSTTHHHHHHTTCCTT-CCCTTTCCCHHHHHHHHTCHHHHHHHHHH----TCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred Hh-CChHHHHHHHHhcCCCcc-hhhccCCCcHHHHHHHcCCHHHHHHHHHc----CCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 33 333334444433322111 11111111234455567777766665554 333332110 12233445566665
Q ss_pred HHHHHHHH
Q 021791 243 EACQYFVE 250 (307)
Q Consensus 243 ~a~~~~~~ 250 (307)
-+..+++.
T Consensus 225 ~v~~L~~~ 232 (240)
T 3eu9_A 225 MINHLQEA 232 (240)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55554444
No 306
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=54.71 E-value=11 Score=27.95 Aligned_cols=195 Identities=12% Similarity=0.028 Sum_probs=92.7
Q ss_pred HHHHHhcCCchhHHHHHHHHHHcCCCCchhh-------HHHHHHHHH--hcCChHHHHHHHHHHHhCC---------CC-
Q 021791 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVAT-------YTSVVKCLC--SCGRIEDAEELLGEMVRNG---------VS- 151 (307)
Q Consensus 91 l~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~-------~~~ll~~~~--~~~~~~~a~~~~~~~~~~~---------~~- 151 (307)
+...++.|+.+....+++.+.+.|..++... .+.|..+.. +.|+.+-+..+++.-...+ +.
T Consensus 9 L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~ 88 (260)
T 3jxi_A 9 LFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRD 88 (260)
T ss_dssp HHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCC
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccc
Confidence 4455677888888888887777765555332 233433332 5677777776666543311 11
Q ss_pred CCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCcc--------------HHHHHHHHHHHHhcCcHHHHHHHHHHHh
Q 021791 152 PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN--------------IHTYNILIGMFMALNRMDMVREIWNHVK 217 (307)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~--------------~~~~~~l~~~~~~~~~~~~a~~~~~~~~ 217 (307)
.+..-.+.|. ..+..|+.+-+.-+++.-.... ..+ ..-. +.+...+..|+.+-+..+++..
T Consensus 89 ~d~~g~t~L~-~A~~~g~~~~v~~Ll~~ga~~~--~~~~~~~~~~~~~~~~~~~g~-tpL~~A~~~g~~~~v~~Ll~~~- 163 (260)
T 3jxi_A 89 VYYRGQTALH-IAIERRCKHYVELLVEKGADVH--AQARGRFFQPKDEGGYFYFGE-LPLSLAACTNQPHIVHYLTENG- 163 (260)
T ss_dssp SSEESBCHHH-HHHHTTCHHHHHHHHHTTCCTT--CCCEECCCSSSCCCCSCCSCS-SHHHHHHHTTCHHHHHHHHHCS-
T ss_pred cccCCCCHHH-HHHHcCCHHHHHHHHhCCCCcC--ccccccccCcccccccccCCC-CHHHHHHHcCCHHHHHHHHhcc-
Confidence 0112223333 3345677665555544321111 111 1112 2334445677766665555410
Q ss_pred hCCCCCC---HHhHHHHHHHHHccC-c---HHHHHHHHHHHHHcCCCC----------cHhhHHHHHHHHhhchhHHHHH
Q 021791 218 GSELGLD---LDSYTMLIHGLCEKQ-K---WKEACQYFVEMIEKGLLP----------QKVTFETLYRGLIQSDMLRTWR 280 (307)
Q Consensus 218 ~~~~~~~---~~~~~~li~~~~~~g-~---~~~a~~~~~~~~~~~~~p----------~~~~~~~l~~~~~~~g~~~~a~ 280 (307)
..|..++ ..-.+.|..+..... . .+...++++.+++.|..+ |..-.+. +......|..+-+.
T Consensus 164 ~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tp-L~~A~~~g~~~~v~ 242 (260)
T 3jxi_A 164 HKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSP-LMMAAKTGKIGIFQ 242 (260)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCH-HHHHHHTTCHHHHH
T ss_pred ccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCH-HHHHHHcCCHHHHH
Confidence 0333332 222334443332111 1 222345555565554332 2222233 33445678888887
Q ss_pred HHHHHhhhcCC
Q 021791 281 RLKKKLDEESI 291 (307)
Q Consensus 281 ~~~~~~~~~~~ 291 (307)
.++++-.....
T Consensus 243 ~Ll~~g~~~~~ 253 (260)
T 3jxi_A 243 HIIRREIADAA 253 (260)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHhCCCccc
Confidence 77776544433
No 307
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=54.11 E-value=44 Score=22.95 Aligned_cols=14 Identities=21% Similarity=0.131 Sum_probs=5.5
Q ss_pred ChHHHHHHHHHHHh
Q 021791 134 RIEDAEELLGEMVR 147 (307)
Q Consensus 134 ~~~~a~~~~~~~~~ 147 (307)
..-.|.++++.+.+
T Consensus 47 ~h~sA~eI~~~l~~ 60 (162)
T 4ets_A 47 THYTPESLYMEIKQ 60 (162)
T ss_dssp SCBCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHh
Confidence 33334444444433
No 308
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=52.35 E-value=57 Score=25.67 Aligned_cols=24 Identities=4% Similarity=0.091 Sum_probs=13.6
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHH
Q 021791 87 FSIVLHVYSRAHKPQLSLDKLNFM 110 (307)
Q Consensus 87 ~~~ll~~~~~~~~~~~a~~~~~~~ 110 (307)
...++.-|...|+.++|.+.++++
T Consensus 14 ~~~ll~Ey~~~~d~~Ea~~ci~el 37 (339)
T 1ug3_A 14 SKAIIEEYLHLNDMKEAVQCVQEL 37 (339)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHc
Confidence 344555555666666665555554
No 309
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=51.57 E-value=36 Score=22.45 Aligned_cols=22 Identities=5% Similarity=0.138 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHhhCCCCCCHHh
Q 021791 206 MDMVREIWNHVKGSELGLDLDS 227 (307)
Q Consensus 206 ~~~a~~~~~~~~~~~~~~~~~~ 227 (307)
.-.|.++++.+.+.+...+..|
T Consensus 34 ~~sa~ei~~~l~~~~~~is~aT 55 (136)
T 1mzb_A 34 HMSAEDVYKALMEAGEDVGLAT 55 (136)
T ss_dssp SBCHHHHHHHHHHTTCCCCHHH
T ss_pred CCCHHHHHHHHHhhCCCCCHHH
Confidence 3344444444444433333333
No 310
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=51.06 E-value=49 Score=22.82 Aligned_cols=67 Identities=6% Similarity=0.032 Sum_probs=38.5
Q ss_pred HHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCH
Q 021791 7 YTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV 84 (307)
Q Consensus 7 ~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 84 (307)
...+|.-|...|+.++|...++++..... .......++....... ...-+.+-.++..+.. ++-+..
T Consensus 13 ~~~ii~EYf~~~D~~Ea~~~l~eL~~p~~--~~~~V~~~I~~aldrk--------~~ere~~s~LL~~L~~-~~ls~~ 79 (165)
T 2rg8_A 13 LTPIIQEYFEHGDTNEVAEMLRDLNLGEM--KSGVPVLAVSLALEGK--------ASHREMTSKLLSDLCG-TVMSTT 79 (165)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHTCSGG--GGHHHHHHHHHHHTSC--------HHHHHHHHHHHHHHBT-TTBCHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHhCCccc--HHHHHHHHHHHHHcCC--------HHHHHHHHHHHHHHHH-CCCCHH
Confidence 45688899999999999999999863221 1122222333222211 3444566677777643 443333
No 311
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=48.67 E-value=92 Score=24.13 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=42.8
Q ss_pred HHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCc--HHHHHHHHHHHhhCCCCCCHHh
Q 021791 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNR--MDMVREIWNHVKGSELGLDLDS 227 (307)
Q Consensus 157 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~a~~~~~~~~~~~~~~~~~~ 227 (307)
...++.-|...++.++|.+.++++.... .-...+...+..+.-+.++ .+...+++..+.+.|+-+....
T Consensus 169 i~~lL~EY~~~~D~~EA~~ci~EL~~p~--f~~e~V~~ai~~alE~~~~~~re~~~~LL~~L~~~~~ls~~q~ 239 (307)
T 2zu6_B 169 IDMLLKEYLLSGDISEAEHCLKELEVPH--FHHELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITVDQM 239 (307)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHCCGG--GHHHHHHHHHHHHHTCCSSHHHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHcCCCc--chHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHCCCCCHHHH
Confidence 4567777888888888888888886332 1234455555555555432 4556677777776665544333
No 312
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=47.88 E-value=1e+02 Score=24.49 Aligned_cols=24 Identities=25% Similarity=0.227 Sum_probs=14.3
Q ss_pred HHHHHHHHhcCchhhHHHHHHHHH
Q 021791 8 TSLIYGWCKINRIDMAERFLGEMI 31 (307)
Q Consensus 8 ~~li~~~~~~g~~~~a~~~~~~~~ 31 (307)
+.++.-|...|+.++|.+.++++.
T Consensus 221 ~~lL~EY~~s~D~~EA~~ci~EL~ 244 (358)
T 3eiq_C 221 DMLLKEYLLSGDISEAEHCLKELE 244 (358)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHC
T ss_pred HHHHHHhccCCCHHHHHHHHHHcc
Confidence 445556666666666666666654
No 313
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=47.84 E-value=51 Score=21.54 Aligned_cols=47 Identities=13% Similarity=0.136 Sum_probs=36.2
Q ss_pred HHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCC
Q 021791 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL 55 (307)
Q Consensus 9 ~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~ 55 (307)
.++..+...+.+-.|.++++.+.+.+...+..|.--.|..+...|-+
T Consensus 15 ~Il~~l~~~~~~~sa~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv 61 (131)
T 2o03_A 15 AISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLV 61 (131)
T ss_dssp HHHHHHHHCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTTSE
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCE
Confidence 46777777788899999999998887666777776677777775543
No 314
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=47.78 E-value=65 Score=22.15 Aligned_cols=50 Identities=2% Similarity=-0.106 Sum_probs=30.3
Q ss_pred cCcHHHHHHHHHHHhhCCCCC--CHHhHHHHHH-HH-----HccCcHHHHHHHHHHHH
Q 021791 203 LNRMDMVREIWNHVKGSELGL--DLDSYTMLIH-GL-----CEKQKWKEACQYFVEMI 252 (307)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~~--~~~~~~~li~-~~-----~~~g~~~~a~~~~~~~~ 252 (307)
.|++-+|-++|+..-.....+ ....|..||+ .. .+.|+...|..++.+..
T Consensus 45 ~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al 102 (161)
T 2ijq_A 45 SGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSL 102 (161)
T ss_dssp TTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 377777777777776654444 4445666666 21 34566777776666543
No 315
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=47.30 E-value=47 Score=22.04 Aligned_cols=48 Identities=8% Similarity=0.128 Sum_probs=37.1
Q ss_pred HHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCC
Q 021791 8 TSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASL 55 (307)
Q Consensus 8 ~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~ 55 (307)
..++..+...+.+-.|.++++.+.+.+...+..|.--.|..+...|-.
T Consensus 17 ~~Il~~L~~~~~h~sa~eI~~~l~~~~~~is~aTVYR~L~~L~e~Glv 64 (139)
T 3mwm_A 17 AAVSAALQEVEEFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAGEV 64 (139)
T ss_dssp HHHHHHHTTCSSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCCE
Confidence 356777777778889999999998887777777777777777776654
No 316
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=46.96 E-value=41 Score=22.67 Aligned_cols=58 Identities=14% Similarity=0.151 Sum_probs=27.8
Q ss_pred HhhCCCCCCHHhHHHHHHHHHccC-cHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhch
Q 021791 216 VKGSELGLDLDSYTMLIHGLCEKQ-KWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274 (307)
Q Consensus 216 ~~~~~~~~~~~~~~~li~~~~~~g-~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g 274 (307)
+.+.|.+++..= ..++..+...+ ..-.|.++++.+.+.+...+..|...-+..+...|
T Consensus 8 l~~~g~r~T~qR-~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~G 66 (150)
T 2w57_A 8 LKDAGLKVTLPR-LKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAG 66 (150)
T ss_dssp HHHTTCCCCHHH-HHHHHHHTSGGGSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTT
T ss_pred HHHcCCCCCHHH-HHHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCC
Confidence 344455544322 23333343333 34456666666655554445555555555555544
No 317
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=46.59 E-value=43 Score=21.91 Aligned_cols=40 Identities=20% Similarity=0.183 Sum_probs=17.0
Q ss_pred HHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCC
Q 021791 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168 (307)
Q Consensus 129 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (307)
+...+..-.|.++++.+.+.+...+..|....+..+...|
T Consensus 20 l~~~~~~~sa~ei~~~l~~~~~~is~~TVYR~L~~L~e~G 59 (131)
T 2o03_A 20 LETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSG 59 (131)
T ss_dssp HHHCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTT
T ss_pred HHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCC
Confidence 3333344444455555444443334444333444444333
No 318
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=46.22 E-value=31 Score=24.77 Aligned_cols=19 Identities=11% Similarity=0.073 Sum_probs=10.4
Q ss_pred HHHHHhcCchhhHHHHHHH
Q 021791 11 IYGWCKINRIDMAERFLGE 29 (307)
Q Consensus 11 i~~~~~~g~~~~a~~~~~~ 29 (307)
+...+..|+.+....++..
T Consensus 10 l~~A~~~g~~~~v~~ll~~ 28 (231)
T 3aji_A 10 ICNLAYSGKLDELKERILA 28 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHh
Confidence 4444556666655555544
No 319
>3bge_A Predicted ATPase; structural genomics, predicted AAA+ATPase C-terminal fragmen protein structure initiative; 1.85A {Haemophilus influenzae} SCOP: a.80.1.2
Probab=45.93 E-value=80 Score=22.60 Aligned_cols=47 Identities=19% Similarity=0.173 Sum_probs=27.7
Q ss_pred HHHHHHHHHh---cCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhC
Q 021791 7 YTSLIYGWCK---INRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRA 53 (307)
Q Consensus 7 ~~~li~~~~~---~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~ 53 (307)
+-.+|+++.+ ..+.+.|+-.+.+|++.|-.|....-..++.+....|
T Consensus 7 HYd~ISAf~KSiRGSDpDAAly~LaRMl~~GEDp~~IaRRLvi~AsEDIG 56 (201)
T 3bge_A 7 FYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVG 56 (201)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhcc
Confidence 3345555554 3667777777778877776655544444444444433
No 320
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=45.03 E-value=73 Score=21.92 Aligned_cols=59 Identities=5% Similarity=-0.030 Sum_probs=35.6
Q ss_pred HHHHHHHHhcCCChhHHHHHHHHHhhcCCCCc--cHHHHHHHHH-HH-----HhcCcHHHHHHHHHHHh
Q 021791 157 YNCFFKEYRGRKDANGAMKLYRQMKEDDLCVP--NIHTYNILIG-MF-----MALNRMDMVREIWNHVK 217 (307)
Q Consensus 157 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~l~~-~~-----~~~~~~~~a~~~~~~~~ 217 (307)
|...+..+ ..|++-+|.++|+..-.... .+ ....|..||+ .. .+.|+...|..++.+..
T Consensus 36 ~~~~i~lF-n~g~yfeaHEvLEe~W~~~~-~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al 102 (161)
T 2ijq_A 36 VVHGVRLY-NSGEFHESHDCFEDEWYNYG-RGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSL 102 (161)
T ss_dssp HHHHHHHH-HTTCHHHHHHHHHHHTTTTC-SSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHH-hCCCchHHHHHHHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 44444444 44888888888888876643 44 4556666666 22 24566666666665443
No 321
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=44.86 E-value=15 Score=27.28 Aligned_cols=50 Identities=6% Similarity=-0.073 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHH-------HHHHHHHHHH--hcCCchhHHHHHHHHH
Q 021791 62 EKTIRNAEKVFDEMRVRGIEPDVT-------SFSIVLHVYS--RAHKPQLSLDKLNFMK 111 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~~~~~~-------~~~~ll~~~~--~~~~~~~a~~~~~~~~ 111 (307)
.|+.+....+++.+.+.|..++.. -.+.|..+.. +.|+.+-+..+++.-.
T Consensus 15 ~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~ 73 (260)
T 3jxi_A 15 RGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAE 73 (260)
T ss_dssp HTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcc
Confidence 455555666666666666555433 2234443432 5677777766666543
No 322
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=43.29 E-value=44 Score=23.23 Aligned_cols=129 Identities=12% Similarity=0.041 Sum_probs=57.4
Q ss_pred HHHHHhcCCchhHHHHHHHHHHcCCCCchhh--HHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCC
Q 021791 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVAT--YTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRK 168 (307)
Q Consensus 91 l~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (307)
+...+..|+.+ +++.+.+.|..++... -.+.+...+..|+.+-+..+++.-...-...+..-.+. +...+..|
T Consensus 43 L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~-L~~A~~~~ 117 (201)
T 3hra_A 43 LNIAVHNNDIE----IAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNA-LIPAAEKG 117 (201)
T ss_dssp HHHHHHHTCHH----HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCS-HHHHHHTT
T ss_pred HHHHHHcCCHH----HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcH-HHHHHHcC
Confidence 34445566644 4455555665544321 12234445567777766655543211000112212222 23344567
Q ss_pred ChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCH
Q 021791 169 DANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL 225 (307)
Q Consensus 169 ~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 225 (307)
+.+-+..+++.-...-. ..+..-.+.|..+.........-.++.+.+.+.|..++.
T Consensus 118 ~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~ 173 (201)
T 3hra_A 118 HIDNVKLLLEDGREDID-FQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSI 173 (201)
T ss_dssp CHHHHHHHHHHCCCCTT-CCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHcCCCCcC-CCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCc
Confidence 77666555554311111 233333344444443332233335556666666665543
No 323
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=42.98 E-value=39 Score=22.42 Aligned_cols=41 Identities=15% Similarity=0.117 Sum_probs=16.5
Q ss_pred HHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcC
Q 021791 127 KCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGR 167 (307)
Q Consensus 127 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (307)
..+...+..-.|.++++.+.+.+...+..|...-+..+...
T Consensus 21 ~~L~~~~~h~sa~eI~~~l~~~~~~is~aTVYR~L~~L~e~ 61 (139)
T 3mwm_A 21 AALQEVEEFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADA 61 (139)
T ss_dssp HHHTTCSSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHT
T ss_pred HHHHhCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHC
Confidence 33333333444444444444444333433333333333333
No 324
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=42.92 E-value=95 Score=22.62 Aligned_cols=116 Identities=10% Similarity=0.062 Sum_probs=0.0
Q ss_pred HHHHHHHHH--hcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHH-------------------hcCChHHHHHHHHHH
Q 021791 87 FSIVLHVYS--RAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLC-------------------SCGRIEDAEELLGEM 145 (307)
Q Consensus 87 ~~~ll~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~-------------------~~~~~~~a~~~~~~~ 145 (307)
+..+.+++. +.+++.....+++.+...+....... ...+..+. ..--++.|+.+|+.+
T Consensus 20 f~~~c~aFR~~r~~dFrq~rdi~eall~~~l~~~~~~-~k~iri~QfLsRI~eG~~LD~~Fd~~~~lTPLESAl~v~~~I 98 (235)
T 3bu8_A 20 FHEALRAFRGSRYGDFRQIRDIMQALLVRPLGKEHTV-SRLLRVMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMI 98 (235)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTTSCCCCCHHH-HHHHHHHHHHHHHHTTTCTTEECSSSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHHhCcccccccc-hhHHHHHHHHHHHHcCCCCCcccCCCCCCChHHHHHHHHHHH
Q ss_pred HhCCCCCCHh-------hHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcH
Q 021791 146 VRNGVSPSAE-------TYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRM 206 (307)
Q Consensus 146 ~~~~~~~~~~-------~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 206 (307)
.+.-..++.. .-...+..|.+.|.+++|.+++++.... .++..-...-+....+..+.
T Consensus 99 ~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~---~~s~~kLr~kL~~II~~Kd~ 163 (235)
T 3bu8_A 99 KTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSK---DPTTQKLRNDLLNIIREKNL 163 (235)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTT---CGGGHHHHHHHHHHHHHTCT
T ss_pred HHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcC---CCCchHHHHHHHHHHhccCc
No 325
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=42.64 E-value=51 Score=19.42 Aligned_cols=25 Identities=12% Similarity=0.282 Sum_probs=17.2
Q ss_pred HHHHHHHccCcHHHHHHHHHHHHHc
Q 021791 230 MLIHGLCEKQKWKEACQYFVEMIEK 254 (307)
Q Consensus 230 ~li~~~~~~g~~~~a~~~~~~~~~~ 254 (307)
.+.+-|+..|+++.|+.+|+..++.
T Consensus 17 k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 17 KLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHH
Confidence 3455567777888888887776654
No 326
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=42.37 E-value=85 Score=21.89 Aligned_cols=170 Identities=7% Similarity=-0.118 Sum_probs=96.8
Q ss_pred CCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHH
Q 021791 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161 (307)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 161 (307)
+|..+-...+.++...++.+....+.+ +.. .++..+-...+.++...+..+.... +..+.. .++...-...+
T Consensus 26 ~~~~vr~~A~~~L~~~~~~~~~~~L~~-~l~---~~~~~vr~~a~~~L~~~~~~~~~~~-L~~~l~---d~~~~vr~~a~ 97 (201)
T 3ltj_A 26 DSYYVRRAAAYALGKIGDERAVEPLIK-ALK---DEDAWVRRAAADALGQIGDERAVEP-LIKALK---DEDGWVRQSAA 97 (201)
T ss_dssp SCHHHHHHHHHHHHHHCCGGGHHHHHH-HTT---CSSHHHHHHHHHHHHHHCCGGGHHH-HHHHTT---CSSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCChhHHHHHHH-HHc---CCCHHHHHHHHHHHHhhCCHHHHHH-HHHHHc---CCCHHHHHHHH
Confidence 466666666666777666444433333 333 2466666666777777776544433 333333 35777777777
Q ss_pred HHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcH
Q 021791 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241 (307)
Q Consensus 162 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~ 241 (307)
.++.+.++.+....+ ..+.. .++..+-...+.++.+.+..+ +...+..+.. .++...-...+.++...|.
T Consensus 98 ~aL~~~~~~~~~~~L-~~~l~----d~~~~vr~~a~~aL~~~~~~~-~~~~L~~~l~---d~~~~vr~~A~~aL~~~~~- 167 (201)
T 3ltj_A 98 VALGQIGDERAVEPL-IKALK----DEDWFVRIAAAFALGEIGDER-AVEPLIKALK---DEDGWVRQSAADALGEIGG- 167 (201)
T ss_dssp HHHHHHCCGGGHHHH-HHHTT----CSSHHHHHHHHHHHHHHTCGG-GHHHHHHHTT---CSSHHHHHHHHHHHHHHCS-
T ss_pred HHHHHhCcHHHHHHH-HHHHc----CCCHHHHHHHHHHHHHhCCHH-HHHHHHHHHc---CCCHHHHHHHHHHHHHhCc-
Confidence 777777776544444 34433 356666666777777777644 3333444433 2466676777777777766
Q ss_pred HHHHHHHHHHHHcCCCCcHhhHHHHHHHHhh
Q 021791 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQ 272 (307)
Q Consensus 242 ~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~ 272 (307)
.++...+..+.+. ++...-...+.++.+
T Consensus 168 ~~~~~~L~~~l~d---~~~~vr~~A~~aL~~ 195 (201)
T 3ltj_A 168 ERVRAAMEKLAET---GTGFARKVAVNYLET 195 (201)
T ss_dssp HHHHHHHHHHHHH---CCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhC---CCHHHHHHHHHHHHH
Confidence 4566666666644 344444444444433
No 327
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=41.04 E-value=55 Score=23.97 Aligned_cols=57 Identities=14% Similarity=-0.055 Sum_probs=34.3
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHcCCCCch-------hhHHHHHHHHHhc---CChHHHHHHHHHHHh
Q 021791 90 VLHVYSRAHKPQLSLDKLNFMKEKGICPTV-------ATYTSVVKCLCSC---GRIEDAEELLGEMVR 147 (307)
Q Consensus 90 ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~-------~~~~~ll~~~~~~---~~~~~a~~~~~~~~~ 147 (307)
.+...+..|+.+.+..+++.+.+.|..++. .-.+.| ...+.. |+.+-+..+++.-..
T Consensus 5 ~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L-~~A~~~~~~g~~~~v~~Ll~~g~~ 71 (256)
T 2etb_A 5 RLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCL-MKAVLNLQDGVNACIMPLLQIDKD 71 (256)
T ss_dssp HHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHH-HHHHHTCBTTBCTTHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHH-HHHHHccccchHHHHHHHHhcCCc
Confidence 345566778888777777777777655443 223333 333444 777777666665443
No 328
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=41.00 E-value=90 Score=21.79 Aligned_cols=49 Identities=14% Similarity=0.073 Sum_probs=42.6
Q ss_pred ccHHHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHh
Q 021791 2 PNVKMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR 51 (307)
Q Consensus 2 p~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~ 51 (307)
|....++.++..++.-.-.+.++-.+.+....|. .+..+|---.+.+++
T Consensus 109 ~~~~l~~Qll~l~Aed~AieDaIy~L~~al~~g~-I~ld~ylK~vR~LaR 157 (174)
T 2p22_A 109 AKTDGLNQLYNLVAQDYALTDTIECLSRMLHRGT-IPLDTFVKQGRELAR 157 (174)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-SCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHH
Confidence 6677889999999999999999999999999975 577888888888887
No 329
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=40.85 E-value=40 Score=18.13 Aligned_cols=36 Identities=17% Similarity=0.187 Sum_probs=21.5
Q ss_pred HHHHHHHcCCCCcHhhHHHHHHHHhhchh--HHHHHHHHHHhh
Q 021791 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDM--LRTWRRLKKKLD 287 (307)
Q Consensus 247 ~~~~~~~~~~~p~~~~~~~l~~~~~~~g~--~~~a~~~~~~~~ 287 (307)
.++.+++.|+.++ ....++.+.|. ++.|.+++.+|.
T Consensus 12 mlq~L~eMGFd~e-----rae~Alk~Tg~~Gle~AmewL~k~~ 49 (54)
T 2cos_A 12 MLQELVNAGCDQE-----MAGRALKQTGSRSIEAALEYISKMS 49 (54)
T ss_dssp HHHHHHHHHCCHH-----HHHHHHHHHTSCCHHHHHHHHHHHS
T ss_pred HHHHHHHcCCCHH-----HHHHHHHHhCcccHHHHHHHHHHhc
Confidence 3555556666543 23445555665 777887777763
No 330
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=40.46 E-value=94 Score=21.86 Aligned_cols=24 Identities=8% Similarity=-0.353 Sum_probs=16.6
Q ss_pred HHHHHHHHhhchhHHHHHHHHHHh
Q 021791 263 FETLYRGLIQSDMLRTWRRLKKKL 286 (307)
Q Consensus 263 ~~~l~~~~~~~g~~~~a~~~~~~~ 286 (307)
++.+...|.+.|+.++|...+..-
T Consensus 117 y~l~a~lltq~g~r~EaI~y~~~S 140 (242)
T 3kae_A 117 ESLLGDLCTLSGYREEGIGHYVRS 140 (242)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHhhhHhhhh
Confidence 445556677888888888777643
No 331
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=40.22 E-value=1.9e+02 Score=27.89 Aligned_cols=36 Identities=8% Similarity=-0.119 Sum_probs=21.6
Q ss_pred hcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccC
Q 021791 202 ALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239 (307)
Q Consensus 202 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g 239 (307)
+++++..|.+++.++.+. +|+...|..+++.+...|
T Consensus 1296 ~~~~~g~~~k~l~k~~~~--k~~~~~~~~~~~~~~~l~ 1331 (1354)
T 3lxu_X 1296 AHGHYGRMYKYVVKLIEE--KRTRDHFVELAAINGALG 1331 (1354)
T ss_dssp HHTCHHHHHHHHHHHHHH--TCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhc--cccHHHHHHHHHHHHHcC
Confidence 466666666666666654 356666666666555444
No 332
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=40.22 E-value=83 Score=21.15 Aligned_cols=62 Identities=11% Similarity=0.110 Sum_probs=42.5
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCCh
Q 021791 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135 (307)
Q Consensus 73 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 135 (307)
+.+.+.|++++. .=..++..+...+..-.|.++++.+.+.+...+..|.-..+..+...|-+
T Consensus 16 ~~l~~~g~r~T~-qR~~IL~~l~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv 77 (150)
T 2xig_A 16 MSIKKNGLKNSK-QREEVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFI 77 (150)
T ss_dssp HHHHHCC--CHH-HHHHHHHHHHHCSSCBCHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHcCCCCCH-HHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCcE
Confidence 345667776544 33456666667777888999999998887766777776777777776644
No 333
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=39.22 E-value=84 Score=20.96 Aligned_cols=61 Identities=16% Similarity=0.190 Sum_probs=42.0
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCCh
Q 021791 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135 (307)
Q Consensus 73 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 135 (307)
+.+.+.|++++..= ..++..+...+ .-.|.++++.+.+.+...+..|.-.-+..+...|-+
T Consensus 8 ~~L~~~g~r~T~qR-~~Il~~l~~~~-h~ta~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv 68 (145)
T 3eyy_A 8 SDLRQRGYRLTPQR-QLVLEAVDTLE-HATPDDILGEVRKTASGINISTVYRTLELLEELGLV 68 (145)
T ss_dssp HHHHTTTCCCCHHH-HHHHHHHHHHS-SBCHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSE
T ss_pred HHHHHcCCCcCHHH-HHHHHHHHhcC-CCCHHHHHHHHHhhCCCCCHhHHHHHHHHHHHCCcE
Confidence 34566787766543 33445555556 678999999999887777777776777777776644
No 334
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=39.06 E-value=1.7e+02 Score=24.39 Aligned_cols=100 Identities=8% Similarity=0.108 Sum_probs=61.5
Q ss_pred HcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHH
Q 021791 112 EKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIH 191 (307)
Q Consensus 112 ~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 191 (307)
+.|++--...|..-.+.+...|++++|-.+--..... +--+..|.+.+-..=...|+..-.+.+|..+.+.+ ..+..
T Consensus 354 R~~LpGAd~L~~~~F~~l~~~g~y~~AA~~aA~sP~g-iLRt~~Ti~rFk~vp~~pgq~splL~YF~~Ll~~g--~Ln~~ 430 (494)
T 1bpo_A 354 RNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKG-ILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQG--QLNKY 430 (494)
T ss_dssp HTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHSGGG-SSCSHHHHHHHTTSCCCTTSCCHHHHHHHHHHHHS--CCCHH
T ss_pred hcCCccHHHHHHHHHHHHHHcCCHHHHHHHHHhCccc-cccCHHHHHHHhcCCCCCCCCCHHHHHHHHHhccC--ccchH
Confidence 3455444455666666777788888887776555433 33366777666665556667777777777777776 45554
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHH
Q 021791 192 TYNILIGMFMALNRMDMVREIWN 214 (307)
Q Consensus 192 ~~~~l~~~~~~~~~~~~a~~~~~ 214 (307)
----+++.-...|+.+-.++.+.
T Consensus 431 ESlEl~r~vL~q~r~~llekWl~ 453 (494)
T 1bpo_A 431 ESLELCRPVLQQGRKQLLEKWLK 453 (494)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhhHHhHHHHhccHHHHHHHHHh
Confidence 44445555555666655555544
No 335
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=38.68 E-value=58 Score=18.92 Aligned_cols=58 Identities=16% Similarity=0.167 Sum_probs=26.5
Q ss_pred HHhcCCCCCHHHHHHHHHHHHhcC-CchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcC
Q 021791 75 MRVRGIEPDVTSFSIVLHVYSRAH-KPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCG 133 (307)
Q Consensus 75 ~~~~~~~~~~~~~~~ll~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~ 133 (307)
+.+.|+..+..- ..++..+...+ ..-.+.++++.+.+.+...+..|....+..+...|
T Consensus 8 l~~~g~~~t~~r-~~IL~~l~~~~~~~~s~~el~~~l~~~~~~is~~TVyR~L~~L~~~G 66 (83)
T 2fu4_A 8 LKKAGLKVTLPR-LKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAG 66 (83)
T ss_dssp HHHTTCCCCHHH-HHHHHHHTSGGGSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHcCCCcCHHH-HHHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCC
Confidence 344454444333 23333443332 34445555555555544444445444555444444
No 336
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=38.66 E-value=2.4e+02 Score=26.04 Aligned_cols=49 Identities=12% Similarity=-0.068 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCH----HhHHHHHHHHHccC
Q 021791 191 HTYNILIGMFMALNRMDMVREIWNHVKGSELGLDL----DSYTMLIHGLCEKQ 239 (307)
Q Consensus 191 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~----~~~~~li~~~~~~g 239 (307)
.-|..++..+-+.+.++.+.++-+...+.--.-|. ..|+.+.++.+..|
T Consensus 898 ~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l~~~l~~r~f~~a~a~g 950 (950)
T 4gq2_M 898 CYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAG 950 (950)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccchHHHHHHHHHHHhhCC
Confidence 46778888888999999888888777754212122 35777777766554
No 337
>3c1d_A Protein ORAA, regulatory protein RECX; tandem repeats, helix-turn-helix, cytoplasm, DNA damage, DNA repair, SOS response, DNA binding protein; 1.80A {Escherichia coli}
Probab=38.65 E-value=92 Score=21.22 Aligned_cols=49 Identities=18% Similarity=0.109 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCC
Q 021791 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGIC 116 (307)
Q Consensus 66 ~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~ 116 (307)
+....+++.+.+.|+.-|...-...+....+.| .....+-.++.+.|+.
T Consensus 47 ~~i~~vl~~l~~~g~ldD~rfA~~~v~~~~~~g--~G~~~I~~eL~~KGI~ 95 (159)
T 3c1d_A 47 EDYERVIAWCHEHGYLDDSRFVARFIASRSRKG--YGPARIRQELNQKGIS 95 (159)
T ss_dssp HHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHTT--CCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCcCHHHHHHHHHHHHHhCC--ccHHHHHHHHHHcCCC
Confidence 344455666666666655555555666555543 3355666677777764
No 338
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=38.64 E-value=1e+02 Score=21.69 Aligned_cols=171 Identities=7% Similarity=-0.115 Sum_probs=99.9
Q ss_pred CCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHH
Q 021791 82 PDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFF 161 (307)
Q Consensus 82 ~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 161 (307)
++..+-...+..+.+.++.+.. ..+..+... ++..+-...+.++.+.++.+.. ..+..+.. .++..+-...+
T Consensus 31 ~~~~vR~~A~~~L~~~~~~~~~-~~L~~~l~~---~~~~vr~~a~~aL~~~~~~~~~-~~L~~~l~---~~~~~vr~~a~ 102 (211)
T 3ltm_A 31 DSYYVRRAAAYALGKIGDERAV-EPLIKALKD---EDAWVRRAAADALGQIGDERAV-EPLIKALK---DEDGWVRQSAA 102 (211)
T ss_dssp SSHHHHHHHHHHHHHHCCGGGH-HHHHHHTTC---SCHHHHHHHHHHHHHHCCGGGH-HHHHHHTT---CSSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccHH-HHHHHHHcC---CCHHHHHHHHHHHHhhCCHHHH-HHHHHHHc---CCCHHHHHHHH
Confidence 4666666677777777764433 333334332 4666666677777777765443 33333333 35667777777
Q ss_pred HHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcH
Q 021791 162 KEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKW 241 (307)
Q Consensus 162 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~ 241 (307)
.++.+.++.+.. ..+..+.. .++..+-...+.++...+..+ +...+..+.. .++..+-...+.++...+.
T Consensus 103 ~aL~~~~~~~~~-~~L~~~l~----d~~~~vr~~a~~aL~~~~~~~-~~~~L~~~l~---d~~~~vr~~a~~aL~~~~~- 172 (211)
T 3ltm_A 103 VALGQIGDERAV-EPLIKALK----DEDWFVRIAAAFALGEIGDER-AVEPLIKALK---DEDGWVRQSAADALGEIGG- 172 (211)
T ss_dssp HHHHHHCCGGGH-HHHHHHTT----CSSHHHHHHHHHHHHHHCCGG-GHHHHHHHTT---CSSHHHHHHHHHHHHHHCS-
T ss_pred HHHHHhCcHHHH-HHHHHHHh----CCCHHHHHHHHHHHHHcCCHH-HHHHHHHHHc---CCCHHHHHHHHHHHHHhCc-
Confidence 777777775444 44444443 456666667777777777654 3444444443 3466666777777777776
Q ss_pred HHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhc
Q 021791 242 KEACQYFVEMIEKGLLPQKVTFETLYRGLIQS 273 (307)
Q Consensus 242 ~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~ 273 (307)
.++...+..+.+. ++..+-...+.++...
T Consensus 173 ~~~~~~L~~~l~d---~~~~vr~~A~~aL~~~ 201 (211)
T 3ltm_A 173 ERVRAAMEKLAET---GTGFARKVAVNYLETH 201 (211)
T ss_dssp HHHHHHHHHHHHH---CCHHHHHHHHHHHHC-
T ss_pred hhHHHHHHHHHhC---CCHHHHHHHHHHHHhc
Confidence 4566666666654 3444444445554443
No 339
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=38.09 E-value=2.4e+02 Score=25.88 Aligned_cols=52 Identities=4% Similarity=-0.070 Sum_probs=29.3
Q ss_pred HHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhc
Q 021791 129 LCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 129 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 183 (307)
-.+.|..++-..+++...... +..--..++.+++...+.....++++.....
T Consensus 736 ~~~~g~~~~~~~l~~~~~~~~---~~~ek~~ll~aL~~~~d~~~l~~~L~~~l~~ 787 (909)
T 4fke_A 736 AIAQGGQDQWDFAWGQLQQAQ---LVNEADKLRSALACSNEVWLLNRYLGYTLNP 787 (909)
T ss_dssp HHHHSCHHHHHHHHHHHHHCC---SHHHHHHHHHHHTTCCCHHHHHHHHHHTTCT
T ss_pred HHHhCCHHHHHHHHHHHHccC---CHHHHHHHHHHhCCCCCHHHHHHHHHHHhCC
Confidence 344555555555555555432 3334455666666666666666666666544
No 340
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=37.40 E-value=1.3e+02 Score=22.57 Aligned_cols=185 Identities=10% Similarity=-0.016 Sum_probs=85.0
Q ss_pred HHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCH---hhHHHHHHHHhcC
Q 021791 91 LHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPSA---ETYNCFFKEYRGR 167 (307)
Q Consensus 91 l~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~ 167 (307)
+...+..|+.+-+..+ .+.|..++...-.+.+...+..|+.+-+..++ +.|..++. .-++.+. ..+..
T Consensus 35 L~~A~~~g~~~~v~~L----l~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~d~~g~t~L~-~A~~~ 105 (285)
T 3kea_A 35 SYYAIADNNVRLVCTL----LNAGALKNLLENEFPLHQAATLEDTKIVKILL----FSGLDDSQFDDKGNTALY-YAVDS 105 (285)
T ss_dssp HHHHHHTTCHHHHHHH----HHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHH----HTTCCTTCCCTTSCCHHH-HHHHT
T ss_pred HHHHHHcCCHHHHHHH----HhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH----HCCCCCCCcCCCCCcHHH-HHHHc
Confidence 4445566776554444 44454433322233455566777776554444 44544432 2223333 34566
Q ss_pred CChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCC-CHHhHHHHHHHHHccCcHHHHHH
Q 021791 168 KDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELGL-DLDSYTMLIHGLCEKQKWKEACQ 246 (307)
Q Consensus 168 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~li~~~~~~g~~~~a~~ 246 (307)
|+.+-+.-+++.-.... ..+..-+...+...+..|+.+-+..+++ .|..+ +...-...+...+..|+.+-+..
T Consensus 106 g~~~~v~~Ll~~ga~~~--~~~~~g~~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~g~t~L~~A~~~g~~~~v~~ 179 (285)
T 3kea_A 106 GNMQTVKLFVKKNWRLM--FYGKTGWKTSFYHAVMLNDVSIVSYFLS----EIPSTFDLAILLSCIHITIKNGHVDMMIL 179 (285)
T ss_dssp TCHHHHHHHHHHCGGGG--GCSSSGGGSHHHHHHHTTCHHHHHHHHT----TSCTTCCCSTHHHHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHhcCCCCC--ccCCCCCCCHHHHHHHcCCHHHHHHHHh----CCCccccccCCccHHHHHHHcChHHHHHH
Confidence 77766665555522211 1222222234445556777765555544 33322 22122333444456777766665
Q ss_pred HHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhhcCCCCCc
Q 021791 247 YFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGS 295 (307)
Q Consensus 247 ~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~~~~~~ 295 (307)
+++.-.+-... +..-.+..+......|.. ++.+.+.+.|..++.
T Consensus 180 Ll~~gad~n~~-~~~g~t~~L~~A~~~~~~----~~v~~Ll~~gad~~~ 223 (285)
T 3kea_A 180 LLDYMTSTNTN-NSLLFIPDIKLAIDNKDI----EMLQALFKYDINIYS 223 (285)
T ss_dssp HHHHHHHTCTT-CCCBCCTTHHHHHHHTCH----HHHHHHTTSCBCSTT
T ss_pred HHHcCCCCCcc-cCCCCChHHHHHHHcCCH----HHHHHHHHcCCCCCC
Confidence 55543332211 111112212223344554 344555566665543
No 341
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=37.31 E-value=2.5e+02 Score=25.90 Aligned_cols=23 Identities=0% Similarity=-0.002 Sum_probs=13.9
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHH
Q 021791 194 NILIGMFMALNRMDMVREIWNHV 216 (307)
Q Consensus 194 ~~l~~~~~~~~~~~~a~~~~~~~ 216 (307)
-.+..+|...|++++|...|++.
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kA 866 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTT 866 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Confidence 34555666666666666666554
No 342
>2r9g_A AAA ATPase, central region; structural genomics, PSI-2, protein structure initia YORK SGX research center for structural genomics, nysgxrc; 2.09A {Enterococcus faecium} SCOP: a.80.1.2 PDB: 2qw6_A
Probab=37.23 E-value=1.1e+02 Score=21.89 Aligned_cols=17 Identities=29% Similarity=0.655 Sum_probs=10.1
Q ss_pred CchhhHHHHHHHHHhcC
Q 021791 18 NRIDMAERFLGEMIERG 34 (307)
Q Consensus 18 g~~~~a~~~~~~~~~~~ 34 (307)
.+.+.|+-.+.+|++.|
T Consensus 28 SDpDAAly~LaRml~~G 44 (204)
T 2r9g_A 28 SDVDAALHYLARLVEAG 44 (204)
T ss_dssp TCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcC
Confidence 45556666666666655
No 343
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=36.55 E-value=49 Score=21.81 Aligned_cols=12 Identities=17% Similarity=-0.028 Sum_probs=5.3
Q ss_pred hchhHHHHHHHH
Q 021791 272 QSDMLRTWRRLK 283 (307)
Q Consensus 272 ~~g~~~~a~~~~ 283 (307)
..|..+-+.-++
T Consensus 142 ~~~~~~~v~~Ll 153 (156)
T 1bd8_A 142 QRGAQDLVDILQ 153 (156)
T ss_dssp HSCCHHHHHHHH
T ss_pred HcCcHHHHHHHH
Confidence 445444444433
No 344
>3e3v_A Regulatory protein RECX; PSI-II, NYSGXRC, structural genomics, protein initiative; 2.04A {Lactobacillus salivarius}
Probab=36.50 E-value=1.1e+02 Score=21.38 Aligned_cols=48 Identities=8% Similarity=0.106 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCC
Q 021791 102 LSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGV 150 (307)
Q Consensus 102 ~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~ 150 (307)
.+..++..+.+.|.-.|...-...+....+.|.+ ....+-.++...|+
T Consensus 51 ~ie~vl~~L~~~g~ldD~rfA~~~vr~~~~~~~~-G~~~I~~eL~~KGI 98 (177)
T 3e3v_A 51 YISEIINKLIDLDLINDKNYAESYVRTMMNTSDK-GPKVIKLNLSKKGI 98 (177)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCCC-CHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcccc-cHHHHHHHHHHcCC
Confidence 3444555555555543333333444444333222 12333444555554
No 345
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=35.96 E-value=96 Score=20.65 Aligned_cols=62 Identities=13% Similarity=0.127 Sum_probs=43.7
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCCh
Q 021791 73 DEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRI 135 (307)
Q Consensus 73 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 135 (307)
+.+.+.|++++..= ..++..+...+..-.|.++++.+.+.+...+..|.-.-+..+...|-+
T Consensus 11 ~~l~~~g~r~T~qR-~~Il~~L~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv 72 (145)
T 2fe3_A 11 ETLKETGVRITPQR-HAILEYLVNSMAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGLV 72 (145)
T ss_dssp HHHHHTTCCCCHHH-HHHHHHHHHCSSCCCHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHcCCCCCHHH-HHHHHHHHhCCCCCCHHHHHHHHHHhCCCCChhhHHHHHHHHHHCCCE
Confidence 34567787766543 345555666677788999999998887767777777777777776644
No 346
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=35.05 E-value=66 Score=23.84 Aligned_cols=89 Identities=11% Similarity=0.033 Sum_probs=48.6
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHcCCCC-------chhhHHHHHHHHH--hcCChHHHHHHHHHHHhC---------CCC
Q 021791 90 VLHVYSRAHKPQLSLDKLNFMKEKGICP-------TVATYTSVVKCLC--SCGRIEDAEELLGEMVRN---------GVS 151 (307)
Q Consensus 90 ll~~~~~~~~~~~a~~~~~~~~~~~~~~-------~~~~~~~ll~~~~--~~~~~~~a~~~~~~~~~~---------~~~ 151 (307)
.+...++.|+.+.+..+++...+.+... +..-++.|..++. +.|+.+-+..+++.-... +..
T Consensus 16 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~ 95 (273)
T 2pnn_A 16 SIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYT 95 (273)
T ss_dssp HHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCC
T ss_pred HHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccc
Confidence 3445567888888888888777665432 2333444555543 357777777777664321 111
Q ss_pred -CCHhhHHHHHHHHhcCCChhHHHHHHHH
Q 021791 152 -PSAETYNCFFKEYRGRKDANGAMKLYRQ 179 (307)
Q Consensus 152 -~~~~~~~~l~~~~~~~~~~~~a~~~~~~ 179 (307)
.+..-.+.|..+ +..|+.+-+..+++.
T Consensus 96 ~~d~~g~tpL~~A-~~~g~~~~v~~Ll~~ 123 (273)
T 2pnn_A 96 DSYYKGQTALHIA-IERRNMTLVTLLVEN 123 (273)
T ss_dssp STTTTTCCHHHHH-HHTTCHHHHHHHHHT
T ss_pred cccCCCCCHHHHH-HHcCCHHHHHHHHHC
Confidence 122333334333 456776655555544
No 347
>1oai_A Nuclear RNA export factor; nuclear transport, nuclear transport factor; 1.0A {Homo sapiens} SCOP: a.5.2.3
Probab=34.62 E-value=37 Score=18.68 Aligned_cols=23 Identities=9% Similarity=0.058 Sum_probs=11.5
Q ss_pred CCChhHHHHHHHHHhhcCCCCcc
Q 021791 167 RKDANGAMKLYRQMKEDDLCVPN 189 (307)
Q Consensus 167 ~~~~~~a~~~~~~~~~~~~~~~~ 189 (307)
.-+++.|...|.++...+.++|+
T Consensus 33 ~Wd~~~A~~~F~~l~~~~~IP~e 55 (59)
T 1oai_A 33 NWDYTRSAQAFTHLKAKGEIPEV 55 (59)
T ss_dssp TTCHHHHHHHHHHHHHTTCSCGG
T ss_pred CCCHHHHHHHHHHHHHcCCCCHH
Confidence 34555555555555544443443
No 348
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=34.41 E-value=1.1e+02 Score=20.90 Aligned_cols=62 Identities=11% Similarity=0.078 Sum_probs=44.7
Q ss_pred HHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHc--CCCCchhhHHHHHHHHHhcCChH
Q 021791 74 EMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEK--GICPTVATYTSVVKCLCSCGRIE 136 (307)
Q Consensus 74 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~ll~~~~~~~~~~ 136 (307)
.+.+.|++++.. -..++..+...+..-.|.++++.+.+. +...+..|.-.-+..+...|-+.
T Consensus 23 ~L~~~g~r~T~q-R~~IL~~L~~~~~h~sA~eI~~~l~~~~~~~~is~aTVYRtL~~L~e~Glv~ 86 (162)
T 4ets_A 23 ILRQGGLKYTKQ-REVLLKTLYHSDTHYTPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMVT 86 (162)
T ss_dssp HHHHHTCCCCHH-HHHHHHHHHSCCSCBCHHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHcCCCCCHH-HHHHHHHHHhCCCCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHCCCEE
Confidence 345567776553 355667777777888999999999887 66667777666777777777543
No 349
>1dp3_A TRAM protein; helix-loop-helix, DNA binding protein; NMR {Escherichia coli} SCOP: a.55.1.2
Probab=33.99 E-value=19 Score=19.37 Aligned_cols=40 Identities=10% Similarity=0.104 Sum_probs=29.8
Q ss_pred HHccCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhch
Q 021791 235 LCEKQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSD 274 (307)
Q Consensus 235 ~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g 274 (307)
|.+..-.++...+.++=++.|..+....+++....+...|
T Consensus 6 Yvs~~v~~~I~~ive~r~qeGA~~~dvs~Ssv~smLleLG 45 (55)
T 1dp3_A 6 YVSDEIVYKINKIVERRRAEGAKSTDVSFSSISTMLLELG 45 (55)
T ss_dssp CCCCTHHHHHHHHHHHHHHHTCCSTTCCHHHHHHHHHHHT
T ss_pred ehhhHHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHh
Confidence 4455556677777777777788888888888887777776
No 350
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=33.96 E-value=59 Score=22.69 Aligned_cols=155 Identities=12% Similarity=0.071 Sum_probs=80.1
Q ss_pred HHHhcCchhhHHHHHHHHHhcCCCC-c-HHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCH---HHH
Q 021791 13 GWCKINRIDMAERFLGEMIERGVEP-N-VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDV---TSF 87 (307)
Q Consensus 13 ~~~~~g~~~~a~~~~~~~~~~~~~p-~-~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~---~~~ 87 (307)
..++.|+++....++.. +... + ..-++.|. ..+. .+..+.-.++.+.+.+.|..++. .-+
T Consensus 12 ~Aa~~g~~~~~~~l~~~----~~~~~~~~~g~T~Lh-~A~~----------~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~ 76 (186)
T 3t8k_A 12 AAAMLGTYEDFLELFEK----GYEDKESVLKSNILY-DVLR----------NNNDEARYKISMFLINKGADIKSRTKEGT 76 (186)
T ss_dssp HHHHHSCHHHHHHHHHH----SSSCHHHHHTTTHHH-HHTT----------CSCHHHHHHHHHHHHHTTCCSSCCCTTCC
T ss_pred HHHHcCCHHHHHHHHhc----CcccccccCCCCHHH-HHHH----------cCCcchHHHHHHHHHHCCCCCCCCCCCCC
Confidence 34577888886666643 2221 2 22333444 3444 33444455666667777766553 234
Q ss_pred HHHHHHHHh-cCCchhHHHHHHHHHHcCCCCchhh---HHHHHHHHHhcCCh-HHHHHHHHHHHh-CCCCCCHhh---HH
Q 021791 88 SIVLHVYSR-AHKPQLSLDKLNFMKEKGICPTVAT---YTSVVKCLCSCGRI-EDAEELLGEMVR-NGVSPSAET---YN 158 (307)
Q Consensus 88 ~~ll~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~---~~~ll~~~~~~~~~-~~a~~~~~~~~~-~~~~~~~~~---~~ 158 (307)
+.|..++.. ..+.....++.+.+.+.|..++... .++.+...+..+.. ..-..+++.+.+ .|..++... .+
T Consensus 77 TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~T 156 (186)
T 3t8k_A 77 TLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLT 156 (186)
T ss_dssp CTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCC
T ss_pred cHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCC
Confidence 444444443 3455556778888888887665432 21233333334433 345567777777 776654322 22
Q ss_pred HHHHHHhcCCChhHHHHHHHHHhhc
Q 021791 159 CFFKEYRGRKDANGAMKLYRQMKED 183 (307)
Q Consensus 159 ~l~~~~~~~~~~~~a~~~~~~~~~~ 183 (307)
-+....+.|..+-+.-+.+.+.+.
T Consensus 157 -pL~~A~~~~~~~~v~~L~~~~~~~ 180 (186)
T 3t8k_A 157 -ALEFVKRCQKPIALKMMEDYIKKY 180 (186)
T ss_dssp -HHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHcCCHHHHHHHHHHHHHH
Confidence 233334556655444444444333
No 351
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=33.23 E-value=1.2e+02 Score=20.90 Aligned_cols=25 Identities=20% Similarity=0.384 Sum_probs=17.8
Q ss_pred HHHHHHHHhcCCChhHHHHHHHHHh
Q 021791 157 YNCFFKEYRGRKDANGAMKLYRQMK 181 (307)
Q Consensus 157 ~~~l~~~~~~~~~~~~a~~~~~~~~ 181 (307)
...++.-|...++.++|...++++.
T Consensus 13 ~~~ii~EYf~~~D~~Ea~~~l~eL~ 37 (165)
T 2rg8_A 13 LTPIIQEYFEHGDTNEVAEMLRDLN 37 (165)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHhC
Confidence 4456677777777777777777765
No 352
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=31.86 E-value=2.3e+02 Score=23.92 Aligned_cols=65 Identities=12% Similarity=0.090 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhcCCchhHHHHHHHHHHcCC-CCch--hhH-HHHHHHHHhcCChHHHHHHHHHHHhC
Q 021791 84 VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGI-CPTV--ATY-TSVVKCLCSCGRIEDAEELLGEMVRN 148 (307)
Q Consensus 84 ~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~-~~~~--~~~-~~ll~~~~~~~~~~~a~~~~~~~~~~ 148 (307)
...+|.+++.|...+.++.|..+.....--.. .++. ..| -.+...+.-.+++.+|.+.+......
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rk 299 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRK 299 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 45688888888888889999888887641100 1111 112 12345566778888888888887664
No 353
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=31.65 E-value=90 Score=22.76 Aligned_cols=30 Identities=3% Similarity=-0.119 Sum_probs=22.3
Q ss_pred HHHHHHHhcCchhhHHHHHHHHHhcCCCCc
Q 021791 9 SLIYGWCKINRIDMAERFLGEMIERGVEPN 38 (307)
Q Consensus 9 ~li~~~~~~g~~~~a~~~~~~~~~~~~~p~ 38 (307)
+.+...+..|+.+.+..+++.+.+.|..++
T Consensus 4 t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~ 33 (256)
T 2etb_A 4 DRLFSVVSRGVPEELTGLLEYLRWNSKYLT 33 (256)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTT
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHHcCCCcc
Confidence 345566788999988888888877766544
No 354
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=30.11 E-value=47 Score=22.19 Aligned_cols=13 Identities=8% Similarity=0.327 Sum_probs=5.9
Q ss_pred HhcCchhhHHHHH
Q 021791 15 CKINRIDMAERFL 27 (307)
Q Consensus 15 ~~~g~~~~a~~~~ 27 (307)
++.|+.+.+..++
T Consensus 16 ~~~g~~~~v~~ll 28 (165)
T 3twr_A 16 AKAGDVETVKKLC 28 (165)
T ss_dssp HHHTCHHHHHHHC
T ss_pred HHhCCHHHHHHHH
Confidence 3445544444443
No 355
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=30.02 E-value=1e+02 Score=19.12 Aligned_cols=30 Identities=13% Similarity=0.030 Sum_probs=12.9
Q ss_pred HHHHHHHHHcCCCCchhhHHHHHHHHHhcC
Q 021791 104 LDKLNFMKEKGICPTVATYTSVVKCLCSCG 133 (307)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~ 133 (307)
.++.+++..-|+.|+..+...++..|...+
T Consensus 29 e~L~eEfdefGi~~~d~VldKc~ELC~~y~ 58 (101)
T 2keb_A 29 QQLAEELQIFGLDCEEALIEKLVELCVQYG 58 (101)
T ss_dssp HHHHHHHHHHTCBCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHHcC
Confidence 334444444444444444444444444333
No 356
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=29.91 E-value=1.5e+02 Score=21.00 Aligned_cols=11 Identities=27% Similarity=0.386 Sum_probs=4.7
Q ss_pred hcCcHHHHHHH
Q 021791 202 ALNRMDMVREI 212 (307)
Q Consensus 202 ~~~~~~~a~~~ 212 (307)
..|+.+.+..+
T Consensus 148 ~~~~~~~v~~L 158 (231)
T 3aji_A 148 AKGNLKMVHIL 158 (231)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHH
Confidence 34444443333
No 357
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=29.35 E-value=78 Score=24.77 Aligned_cols=211 Identities=15% Similarity=0.128 Sum_probs=98.2
Q ss_pred HHHHHHHhcCchhhHHHHHHHHHhcCCCCcH---HHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHH
Q 021791 9 SLIYGWCKINRIDMAERFLGEMIERGVEPNV---VTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVT 85 (307)
Q Consensus 9 ~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~---~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 85 (307)
+.+...+..|+.+.+..++ +.|..++. .-.+.|.. .+. .|.. ++.+.+.+.|..++..
T Consensus 22 t~L~~Aa~~g~~~~v~~Ll----~~g~~~~~~d~~g~t~L~~-A~~----------~g~~----~~v~~Ll~~g~~~~~~ 82 (364)
T 3ljn_A 22 EKIHVAARKGQTDEVRRLI----ETGVSPTIQNRFGCTALHL-ACK----------FGCV----DTAKYLASVGEVHSLW 82 (364)
T ss_dssp HHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTCCCHHHH-HHH----------HCCH----HHHHHHHHHCCCCCCB
T ss_pred CHHHHHHHcCCHHHHHHHH----HcCCCccccCCCCCcHHHH-HHH----------cCCH----HHHHHHHHCCCCcccc
Confidence 3445555678876655555 44544432 22333433 333 2333 3344445555444432
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCch--------------------hhHHHHHHHHHhcC--ChHHHHHHHH
Q 021791 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTV--------------------ATYTSVVKCLCSCG--RIEDAEELLG 143 (307)
Q Consensus 86 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~--------------------~~~~~ll~~~~~~~--~~~~a~~~~~ 143 (307)
.-...+...+..|+.+-+..+++.....|..++. .-.+ .+...+..| +.+-+..+++
T Consensus 83 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t-~L~~A~~~g~~~~~~v~~Ll~ 161 (364)
T 3ljn_A 83 HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQT-ALHWCVGLGPEYLEMIKILVQ 161 (364)
T ss_dssp TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCC-HHHHHHHSCGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCC-HHHHHHHcCCchHHHHHHHHH
Confidence 2223445556778877777777765554544332 1122 334445556 5554444443
Q ss_pred HHHhCCCCCCH---hhHHHHHHHHhcCCChhHHHHHHHHHhhcC---CCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHh
Q 021791 144 EMVRNGVSPSA---ETYNCFFKEYRGRKDANGAMKLYRQMKEDD---LCVPNIHTYNILIGMFMALNRMDMVREIWNHVK 217 (307)
Q Consensus 144 ~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~ 217 (307)
.|..++. .-.+.|. ..+..|+.+-+..+++...... .-..|..-.+. +...+..|+.+-+..++
T Consensus 162 ----~ga~~~~~d~~g~t~L~-~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~-L~~A~~~g~~~~v~~Ll---- 231 (364)
T 3ljn_A 162 ----LGASPTAKDKADETPLM-RAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSH-LHWAILINWEDVAMRFV---- 231 (364)
T ss_dssp ----HTCCTTCCCTTSCCHHH-HHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCT-THHHHTTTCHHHHHHHH----
T ss_pred ----cCCCCcccCCCCCCHHH-HHHHcCCHHHHHHHHhcccccccccccccCCCCCcH-HHHHHHcCCHHHHHHHH----
Confidence 3443332 2233333 3456677776666665533210 00112222222 33445677766555444
Q ss_pred hCCCCCCHH---hHHHHHHHHHccCcHHHHHHHHHH
Q 021791 218 GSELGLDLD---SYTMLIHGLCEKQKWKEACQYFVE 250 (307)
Q Consensus 218 ~~~~~~~~~---~~~~li~~~~~~g~~~~a~~~~~~ 250 (307)
+.|..++.. -.+.+ ...+..|+.+-+..+++.
T Consensus 232 ~~gad~~~~d~~g~tpL-~~A~~~g~~~~v~~Ll~~ 266 (364)
T 3ljn_A 232 EMGIDVNMEDNEHTVPL-YLSVRAAMVLLTKELLQK 266 (364)
T ss_dssp TTTCCTTCCCTTSCCHH-HHHHHTCCHHHHHHHHHH
T ss_pred HcCCCCCCCCCCCCCHH-HHHHHhChHHHHHHHHHc
Confidence 444444322 22233 333456776665555554
No 358
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=29.01 E-value=87 Score=20.36 Aligned_cols=47 Identities=15% Similarity=0.141 Sum_probs=21.6
Q ss_pred HHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHH
Q 021791 126 VKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMK 175 (307)
Q Consensus 126 l~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ 175 (307)
|...+.+++.+-|+++++-..+.| +...|.+++-.|...=+++-+++
T Consensus 39 ietAa~S~d~elaEeLL~yFVe~g---~kEcF~A~LytCYdLlrpDvVLE 85 (125)
T 3qil_A 39 MQYASESKDTELAEELLQWFLQEE---KRECFGACLFTCYDLLRPDVVLE 85 (125)
T ss_dssp HHTTTSSCCSHHHHHHHHHHTTSC---SHHHHHHHHHHHTTCSCTTHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcC---chHHHHHHHHHHHhccChHHHHH
Confidence 333444445555555555444433 34444444444444444444433
No 359
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=28.86 E-value=2.4e+02 Score=23.38 Aligned_cols=87 Identities=10% Similarity=0.144 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHhcCC---CCC------------HHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchh------
Q 021791 62 EKTIRNAEKVFDEMRVRGI---EPD------------VTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVA------ 120 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~---~~~------------~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~------ 120 (307)
...++++..++.++-..-. .|+ ....+.|++.|.+.++.+.+..+++.+...+..|+..
T Consensus 139 ~~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q 218 (455)
T 3t5v_B 139 HQFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQ 218 (455)
T ss_dssp THHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHH
T ss_pred hhHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccc
Confidence 4556777777776644311 111 1346788899999999999999999998876633322
Q ss_pred --hHH-HHHHHHHhcCChHHHHHHHHHHHhC
Q 021791 121 --TYT-SVVKCLCSCGRIEDAEELLGEMVRN 148 (307)
Q Consensus 121 --~~~-~ll~~~~~~~~~~~a~~~~~~~~~~ 148 (307)
+|. -+...+...+++.+|.+.+.+....
T Consensus 219 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~ 249 (455)
T 3t5v_B 219 QIEYRYLLGRYYLLNSQVHNAFVQFNEAFQS 249 (455)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred eEeeeHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 332 3455667888999999888877654
No 360
>3l6a_A Eukaryotic translation initiation factor 4 gamma; C-terminal region, MA2 domain, W2 domain, EIF4G2, EIF family translation; HET: MES PG4; 2.00A {Homo sapiens}
Probab=28.86 E-value=2.2e+02 Score=22.67 Aligned_cols=76 Identities=14% Similarity=0.219 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCc----HHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCC
Q 021791 6 MYTSLIYGWCKINRIDMAERFLGEMIERGVEPN----VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIE 81 (307)
Q Consensus 6 ~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~----~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 81 (307)
.-..+|.-|...|+.++|.+.++++.. |+ ...+..+..++-+. ...-+.+-.++..+...|+-
T Consensus 14 ~~~~ii~EY~~~~D~~Ea~~~l~eL~~----p~~~~~~~v~~~i~~aLer~---------~~~re~~~~LL~~L~~~~~l 80 (364)
T 3l6a_A 14 LTETVVTEYLNSGNANEAVNGVREMRA----PKHFLPEMLSKVIILSLDRS---------DEDKEKASSLISLLKQEGIA 80 (364)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTC----CGGGHHHHHHHHHHHHHTSC---------HHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhCC----chhhHHHHHHHHHHHHHCCC---------hHHHHHHHHHHHHHHHCCCC
Confidence 456789999999999999999999853 32 22333333333331 34446677777777776654
Q ss_pred CCHHHHHHHHHHH
Q 021791 82 PDVTSFSIVLHVY 94 (307)
Q Consensus 82 ~~~~~~~~ll~~~ 94 (307)
+.......+...+
T Consensus 81 s~~~~~~Gf~~ll 93 (364)
T 3l6a_A 81 TSDNFMQAFLNVL 93 (364)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 4444444443333
No 361
>1wxp_A THO complex subunit 1; death domain, structural genomics, nuclear matrix, riken structural genomics/proteomics initiative, RSGI, transport protein; NMR {Homo sapiens}
Probab=28.51 E-value=1e+02 Score=19.35 Aligned_cols=51 Identities=20% Similarity=0.118 Sum_probs=34.3
Q ss_pred cCcHHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhhcC
Q 021791 238 KQKWKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEES 290 (307)
Q Consensus 238 ~g~~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~ 290 (307)
.+..+.+.+++..-.+.. ....|...|+.++.+.|.-+-|..+.....+..
T Consensus 54 ~~~~eq~~~mL~~W~~r~--G~~AT~~~L~~AL~~~~~~dvae~l~~~~~~~~ 104 (110)
T 1wxp_A 54 EDMKMRAKQLLVAWQDQE--GVHATPENLINALNKSGLSDLAESLTNDNETNS 104 (110)
T ss_dssp SSHHHHHHHHHHHHHHHH--GGGCCHHHHHHHHHHTTCHHHHHHHHCCCSSCS
T ss_pred CCHHHHHHHHHHHHHHhh--CcCcHHHHHHHHHHHcCcHHHHHHHHHHhhccC
Confidence 344456666666555431 234688899999999998888888776665433
No 362
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=28.45 E-value=2e+02 Score=22.02 Aligned_cols=21 Identities=14% Similarity=0.320 Sum_probs=13.2
Q ss_pred HHHHHHHHhcCchhhHHHHHH
Q 021791 8 TSLIYGWCKINRIDMAERFLG 28 (307)
Q Consensus 8 ~~li~~~~~~g~~~~a~~~~~ 28 (307)
++.+...++.|+.+.+..+++
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~ 46 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLE 46 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH
T ss_pred ChHHHHHHHcCCHHHHHHHHH
Confidence 445555667888776665554
No 363
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=28.30 E-value=45 Score=21.67 Aligned_cols=53 Identities=11% Similarity=0.125 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHH
Q 021791 86 SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEEL 141 (307)
Q Consensus 86 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~ 141 (307)
.|.-.|...+.+++.+-|.++++...+.| +...|.+++-.|...=+++-++++
T Consensus 34 LykDAietAa~S~d~elaEeLL~yFVe~g---~kEcF~A~LytCYdLlrpDvVLEl 86 (125)
T 3qil_A 34 LYKDAMQYASESKDTELAEELLQWFLQEE---KRECFGACLFTCYDLLRPDVVLEL 86 (125)
T ss_dssp CSSHHHHTTTSSCCSHHHHHHHHHHTTSC---SHHHHHHHHHHHTTCSCTTHHHHT
T ss_pred cHHHHHHHHHHcCCHHHHHHHHHHHHHcC---chHHHHHHHHHHHhccChHHHHHH
Confidence 34456666777888888888888888876 666777777777777666666554
No 364
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=28.19 E-value=88 Score=17.97 Aligned_cols=54 Identities=7% Similarity=0.217 Sum_probs=34.3
Q ss_pred chhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHH
Q 021791 19 RIDMAERFLGEMIERGVEPNVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR 76 (307)
Q Consensus 19 ~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 76 (307)
..++|.+.|.+|+...-.....+|...+..+.....+.. .....+=.++|++..
T Consensus 13 t~eea~~~F~~LL~e~~V~~~~tWe~~~~~i~~DpRY~a----l~~~~eRk~~F~ey~ 66 (71)
T 1uzc_A 13 TKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSA----LAKLSEKKQAFNAYK 66 (71)
T ss_dssp SHHHHHHHHHHHHHHTTCCTTCCHHHHHHHHHTSGGGGG----CSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCcCCCCCHHHHHHHHccCccccc----cCCHHHHHHHHHHHH
Confidence 467899999999876333455689999988877544432 223344445555443
No 365
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=28.04 E-value=2.2e+02 Score=22.41 Aligned_cols=134 Identities=10% Similarity=0.062 Sum_probs=73.7
Q ss_pred HHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchh----HHHHHHHHHHcCCC
Q 021791 41 TYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQL----SLDKLNFMKEKGIC 116 (307)
Q Consensus 41 ~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~----a~~~~~~~~~~~~~ 116 (307)
+|.++..-|.+ .+++++|++++-.-. ..+.+.|+... +.-+++-..+.+++
T Consensus 37 ~~RTi~~Ry~~----------~k~y~eAidLL~~GA---------------~~ll~~~Q~~sg~DL~~llvevy~~~~~~ 91 (336)
T 3lpz_A 37 ETRLVAARYSK----------QGNWAAAVDILASVS---------------QTLLRSGQGGSGGDLAVLLVDTFRQAGQR 91 (336)
T ss_dssp HHHHHHHHHHH----------TTCHHHHHHHHHHHH---------------HHHHHTTCHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHh----------hcCHHHHHHHHHHHH---------------HHHHHCCCcchHHHHHHHHHHHHHHcCCC
Confidence 45555666666 666777776654321 12233344333 33334555566777
Q ss_pred CchhhHHHHHHHHHhcCChH-HHHHHHHHHH----hCC--CCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCcc
Q 021791 117 PTVATYTSVVKCLCSCGRIE-DAEELLGEMV----RNG--VSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN 189 (307)
Q Consensus 117 ~~~~~~~~ll~~~~~~~~~~-~a~~~~~~~~----~~~--~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 189 (307)
+|......++..+.....-+ .=..+.+++. +.| ..-|+.....+...|.+.+++.+|..-|- . +. .++
T Consensus 92 ~~~~~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~i--l--g~-~~s 166 (336)
T 3lpz_A 92 VDGASRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLV--L--GT-KES 166 (336)
T ss_dssp CCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHT--T--SC-TTH
T ss_pred CCHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHH--h--cC-Cch
Confidence 77777777777776655321 1122333332 222 33466777778888899999888887763 2 21 334
Q ss_pred HHHHHHHHHHHHhcC
Q 021791 190 IHTYNILIGMFMALN 204 (307)
Q Consensus 190 ~~~~~~l~~~~~~~~ 204 (307)
...+..++.-+...+
T Consensus 167 ~~~~a~mL~ew~~~~ 181 (336)
T 3lpz_A 167 PEVLARMEYEWYKQD 181 (336)
T ss_dssp HHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhc
Confidence 466655555444433
No 366
>3ygs_P Procaspase 9; apoptosis, caspase activation, caspase recruitment, recognition complex; 2.50A {Homo sapiens} SCOP: a.77.1.3
Probab=26.68 E-value=1.1e+02 Score=18.64 Aligned_cols=14 Identities=14% Similarity=0.211 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHhhC
Q 021791 206 MDMVREIWNHVKGS 219 (307)
Q Consensus 206 ~~~a~~~~~~~~~~ 219 (307)
.+.|.++++.+..+
T Consensus 53 ~~~ar~Lld~L~~r 66 (97)
T 3ygs_P 53 RDQARQLIIDLETR 66 (97)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHc
Confidence 44444444444443
No 367
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=26.29 E-value=1.1e+02 Score=24.69 Aligned_cols=35 Identities=23% Similarity=0.425 Sum_probs=14.7
Q ss_pred HHHHHHhcCCCCCHHH--HHHHHHHHHhcCCchhHHH
Q 021791 71 VFDEMRVRGIEPDVTS--FSIVLHVYSRAHKPQLSLD 105 (307)
Q Consensus 71 ~~~~~~~~~~~~~~~~--~~~ll~~~~~~~~~~~a~~ 105 (307)
+++.+.+.|..|+... ....+...+..|+.+-+.-
T Consensus 29 ~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~ 65 (437)
T 1n11_A 29 IVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKY 65 (437)
T ss_dssp HHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 3334444554444221 1223444455566544333
No 368
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=25.48 E-value=1.7e+02 Score=20.37 Aligned_cols=48 Identities=19% Similarity=0.205 Sum_probs=29.8
Q ss_pred cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh
Q 021791 38 NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSR 96 (307)
Q Consensus 38 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~ 96 (307)
....++.++..++. ..-+++++-.+.+....|. .+..+|.--.+.+++
T Consensus 110 ~~~l~~Qll~l~Ae----------d~AieDaIy~L~~al~~g~-I~ld~ylK~vR~LaR 157 (174)
T 2p22_A 110 KTDGLNQLYNLVAQ----------DYALTDTIECLSRMLHRGT-IPLDTFVKQGRELAR 157 (174)
T ss_dssp SSHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHTS-SCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHH
Confidence 34456667776666 6667777777777776663 455555555555554
No 369
>3e3v_A Regulatory protein RECX; PSI-II, NYSGXRC, structural genomics, protein initiative; 2.04A {Lactobacillus salivarius}
Probab=25.02 E-value=1.8e+02 Score=20.26 Aligned_cols=113 Identities=6% Similarity=-0.034 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHH
Q 021791 66 RNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEM 145 (307)
Q Consensus 66 ~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~ 145 (307)
+....+++.+.+.|+.-|...-...+....+.|.+ ....+-.++.+.|+.++ .....+..+......+.|..+.++-
T Consensus 50 ~~ie~vl~~L~~~g~ldD~rfA~~~vr~~~~~~~~-G~~~I~~eL~~KGI~~~--~I~~al~~~~~~de~e~a~~l~~Kk 126 (177)
T 3e3v_A 50 DYISEIINKLIDLDLINDKNYAESYVRTMMNTSDK-GPKVIKLNLSKKGIDDN--IAEDALILYTDKLQVEKGVTLAEKL 126 (177)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCCC-CHHHHHHHHHTTTCCHH--HHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcccc-cHHHHHHHHHHcCCCHH--HHHHHHHhCCchhHHHHHHHHHHHH
Confidence 45667778888888886776667777777766554 35677788888998533 2222222211112234455555543
Q ss_pred HhC-CCCCCHhhHHHHHHHHhcCCC-hhHHHHHHHHHh
Q 021791 146 VRN-GVSPSAETYNCFFKEYRGRKD-ANGAMKLYRQMK 181 (307)
Q Consensus 146 ~~~-~~~~~~~~~~~l~~~~~~~~~-~~~a~~~~~~~~ 181 (307)
... ...++.....-++..+.+.|- ++.+..+++.+.
T Consensus 127 ~~~~~~~~~~~~~~K~~~~L~rrGF~~~~I~~vl~~l~ 164 (177)
T 3e3v_A 127 ANRYSHDSYRNKQNKIKQSLLTKGFSYDIIDTIIQELD 164 (177)
T ss_dssp HHHTTTSCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HhhccCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHCc
Confidence 222 111222334445555555553 344555555543
No 370
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens}
Probab=24.65 E-value=2.8e+02 Score=22.44 Aligned_cols=162 Identities=9% Similarity=0.021 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCC---hHHHHHHHHHHHhCCCC--CCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHH
Q 021791 123 TSVVKCLCSCGR---IEDAEELLGEMVRNGVS--PSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILI 197 (307)
Q Consensus 123 ~~ll~~~~~~~~---~~~a~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~ 197 (307)
..++...+..|+ .+.|.+.|+.....+.. .++..-..+...-.+. .++-..+++.... ..+..--..++
T Consensus 201 ~~~l~~ac~~g~~~c~~~A~~~f~~~~~~~~~~~i~~dlr~~Vy~~~~~~--~~~~~~l~~~y~~----s~~~~ek~~ll 274 (419)
T 3rjo_A 201 SQLLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVFAVGAQS--TEGWDFLYSKYQF----SLSSTEKSQIE 274 (419)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTCSCCCGGGHHHHHHHHTTS--HHHHHHHHHHHHH----CCCHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhCCCCCCCCCCcceeEEeeeeCC--HHHHHHHHHHHhc----CCCHHHHHHHH
Q ss_pred HHHHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccCcHHHHHHHHHHHHHc---CCCCcHhhHHHHHHHHhhc-
Q 021791 198 GMFMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQKWKEACQYFVEMIEK---GLLPQKVTFETLYRGLIQS- 273 (307)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g~~~~a~~~~~~~~~~---~~~p~~~~~~~l~~~~~~~- 273 (307)
.+++...+.+...++++.......-........+.......--.+.|.+.+.+=-+. .+.++...+..++.+....
T Consensus 275 ~aL~~s~d~~ll~~~L~~~l~~~~ir~qD~~~~~~~v~~n~~g~~~aw~fl~~nw~~l~~~~~~~~~~~~~~i~~~~~~~ 354 (419)
T 3rjo_A 275 FALCRTQNKEKLQWLLDESFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQF 354 (419)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHTSSSCGGGHHHHHHHHHTSTTTHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHTTTTC
T ss_pred HHcCCCCCHHHHHHHHHHHhCCCCCchhHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhCcCchhHHHHHHHHhhcC
Q ss_pred ---hhHHHHHHHHHHhhhcC
Q 021791 274 ---DMLRTWRRLKKKLDEES 290 (307)
Q Consensus 274 ---g~~~~a~~~~~~~~~~~ 290 (307)
.+.++.+++++.-...+
T Consensus 355 ~t~~~l~e~~~Ff~~~~~~~ 374 (419)
T 3rjo_A 355 STRTRLEEVKGFFSSLKENG 374 (419)
T ss_dssp CSHHHHHHHHHHHHTTTTC-
T ss_pred CCHHHHHHHHHHHHhCcccc
No 371
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=24.33 E-value=1.9e+02 Score=20.43 Aligned_cols=86 Identities=12% Similarity=0.120 Sum_probs=48.4
Q ss_pred HHHHHhcCcHHHHHHHHHHHhhCCCCCCH---HhHHHHHHHHHccCcHHHHHHHHHHHHHcCCCC---------cHhhHH
Q 021791 197 IGMFMALNRMDMVREIWNHVKGSELGLDL---DSYTMLIHGLCEKQKWKEACQYFVEMIEKGLLP---------QKVTFE 264 (307)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~---~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p---------~~~~~~ 264 (307)
+...+..|+.+.+..+++ .|..++. .-.+ -+...+..|+.+-+..+++.+.+.|..+ |..-.+
T Consensus 125 L~~A~~~~~~~~v~~Ll~----~ga~~~~~d~~g~t-~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~t 199 (232)
T 2rfa_A 125 LSFAACVGSEEIVRLLIE----HGADIRAQDSLGNT-VLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLT 199 (232)
T ss_dssp HHHHHHHTCHHHHHHHHH----TTCCTTCCCTTSCC-HHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCC
T ss_pred HHHHHHcCCHHHHHHHHH----CCCCCCCCCCCCCC-HHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCC
Confidence 344455677665555554 3444332 2222 3444566788888888888888877543 222233
Q ss_pred HHHHHHhhchhHHHHHHHHHHhhh
Q 021791 265 TLYRGLIQSDMLRTWRRLKKKLDE 288 (307)
Q Consensus 265 ~l~~~~~~~g~~~~a~~~~~~~~~ 288 (307)
. +......|..+-+..+++.-..
T Consensus 200 p-l~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 200 P-FKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp H-HHHHHHHTCHHHHHHHHHHHHH
T ss_pred H-HHHHHHcCCHHHHHHHHhcCcc
Confidence 3 3344567777777776665433
No 372
>2f6m_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomes, trafficking complex, vacuole protei sorting, ESCRT protein complexes; HET: DDQ; 2.10A {Saccharomyces cerevisiae} SCOP: a.2.17.1 PDB: 2f66_A*
Probab=24.19 E-value=1e+02 Score=17.35 Aligned_cols=46 Identities=15% Similarity=0.059 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCcHHHHHHHHHHHHh
Q 021791 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPNVVTYNVLLNGVCR 51 (307)
Q Consensus 5 ~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~~~~ll~~~~~ 51 (307)
..++.++..++...-.++++-.+++..+.|. .+..+|.--.+.+++
T Consensus 3 pl~~Qll~l~Aed~AieDaiy~L~~aL~~g~-I~l~~ylK~vR~LaR 48 (65)
T 2f6m_A 3 DGLNQLYNLVAQDYALTDTIEALSRMLHRGT-IPLDTFVKQGRELAR 48 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-SCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHH
Confidence 3577888899988889999999999999874 577788777777777
No 373
>3ctd_A Putative ATPase, AAA family; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Prochlorococcus marinus subsp} SCOP: a.80.1.2
Probab=23.96 E-value=2.1e+02 Score=20.74 Aligned_cols=55 Identities=7% Similarity=0.021 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCc-----hhHHHHHHHHHHcCCC
Q 021791 62 EKTIRNAEKVFDEMRVRGIEPDVTSFSIVLHVYSRAHKP-----QLSLDKLNFMKEKGIC 116 (307)
Q Consensus 62 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-----~~a~~~~~~~~~~~~~ 116 (307)
..+.+.|+-++.+|++.|-.|.-..-..++.+.-..|.- ..|...++.....|.+
T Consensus 48 GSDpDAALywLaRMl~~GEDp~~IaRRLvi~AsEDIGlAdP~Al~~a~aa~~a~~~iG~P 107 (213)
T 3ctd_A 48 GSDPDATLYWLANMVEAGEDPNFIFRRLLISACEDIGLADPNAIVVVQSCCDAFDRVGFP 107 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHhCCC
Confidence 456677777777777777777777777777777666642 2345555555666653
No 374
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=23.57 E-value=57 Score=23.21 Aligned_cols=19 Identities=16% Similarity=0.172 Sum_probs=10.7
Q ss_pred HHHHHhcCchhhHHHHHHH
Q 021791 11 IYGWCKINRIDMAERFLGE 29 (307)
Q Consensus 11 i~~~~~~g~~~~a~~~~~~ 29 (307)
+...+..|+.+.+..+++.
T Consensus 6 L~~A~~~g~~~~v~~Ll~~ 24 (228)
T 2dzn_A 6 LHQACMENEFFKVQELLHS 24 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHhc
Confidence 3444556666665555554
No 375
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=23.27 E-value=1.4e+02 Score=21.26 Aligned_cols=197 Identities=10% Similarity=0.057 Sum_probs=87.4
Q ss_pred HHHHHHhcCCCCCHHH--HHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhh--HHHHHHHHHhcCChHHHHHHHHHHH
Q 021791 71 VFDEMRVRGIEPDVTS--FSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT--YTSVVKCLCSCGRIEDAEELLGEMV 146 (307)
Q Consensus 71 ~~~~~~~~~~~~~~~~--~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~ll~~~~~~~~~~~a~~~~~~~~ 146 (307)
+++.+.+.|..++... -...+...+..|+.+ +++.+.+.|..++... -.+.+...+..|+.+-+..+ .
T Consensus 26 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L----l 97 (237)
T 3b7b_A 26 ICHMLVQAGANIDTCSEDQRTPLMEAAENNHLE----AVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYL----L 97 (237)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH----HHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHH----H
T ss_pred HHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHH----HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH----H
Confidence 4444555554443311 112344445566654 3444455554433211 12234444566766554444 3
Q ss_pred hCC-CCC---CHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCccHHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCC
Q 021791 147 RNG-VSP---SAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPNIHTYNILIGMFMALNRMDMVREIWNHVKGSELG 222 (307)
Q Consensus 147 ~~~-~~~---~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~ 222 (307)
+.+ ..+ +..-.+.+ ...+..|+.+-+..+++.-.... ..+..-.+ .+...+..|+.+.+..+ .+.|..
T Consensus 98 ~~~~~~~~~~~~~g~t~L-~~A~~~~~~~~~~~Ll~~g~~~~--~~~~~g~t-~L~~A~~~~~~~~~~~L----l~~g~~ 169 (237)
T 3b7b_A 98 SNGQMDVNCQDDGGWTPM-IWATEYKHVDLVKLLLSKGSDIN--IRDNEENI-CLHWAAFSGCVDIAEIL----LAAKCD 169 (237)
T ss_dssp TTTCCCTTCCCTTSCCHH-HHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCC-HHHHHHHHCCHHHHHHH----HTTTCC
T ss_pred hCCCCCcccCCCCCCCHH-HHHHHcCCHHHHHHHHHCCCCCC--ccCCCCCC-HHHHHHHCCCHHHHHHH----HHcCCC
Confidence 333 221 22222223 33345566554444443211111 11111112 23334456666544444 444444
Q ss_pred CCHH---hHHHHHHHHHccCcHHHHHHHHHHHHHcCCCCcHhh--HHHHHHHHhhchhHHHHHHHHHHhhh
Q 021791 223 LDLD---SYTMLIHGLCEKQKWKEACQYFVEMIEKGLLPQKVT--FETLYRGLIQSDMLRTWRRLKKKLDE 288 (307)
Q Consensus 223 ~~~~---~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~~~~--~~~l~~~~~~~g~~~~a~~~~~~~~~ 288 (307)
++.. -.+ .+...+..|+.+ +.+.+++.|..++... =..-+......|+...+.++.+.+.+
T Consensus 170 ~~~~~~~g~t-~L~~A~~~~~~~----~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~~l~d 235 (237)
T 3b7b_A 170 LHAVNIHGDS-PLHIAARENRYD----CVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQD 235 (237)
T ss_dssp TTCCCTTCCC-HHHHHHHTTCHH----HHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHHHHHH
T ss_pred CCCcCCCCCC-HHHHHHHhCCHh----HHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3321 122 233334566654 3444555565554321 12234455677888888888887764
No 376
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=23.22 E-value=2.9e+02 Score=22.17 Aligned_cols=88 Identities=13% Similarity=0.097 Sum_probs=57.0
Q ss_pred HHHHHHHhcCCchhHHHHHHHHHHcC----------------CCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhC----
Q 021791 89 IVLHVYSRAHKPQLSLDKLNFMKEKG----------------ICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRN---- 148 (307)
Q Consensus 89 ~ll~~~~~~~~~~~a~~~~~~~~~~~----------------~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~---- 148 (307)
.++..+....+.+++.+.++.+...- ..+.......+...|...|+.+.|..++++....
T Consensus 81 ~~~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~ 160 (393)
T 4b4t_O 81 YLLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKK 160 (393)
T ss_dssp TTHHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhcc
Confidence 34556667788899999988774321 1222344566778888999999999999887642
Q ss_pred -CCCCC--HhhHHHHHHHHhcCCChhHHHHH
Q 021791 149 -GVSPS--AETYNCFFKEYRGRKDANGAMKL 176 (307)
Q Consensus 149 -~~~~~--~~~~~~l~~~~~~~~~~~~a~~~ 176 (307)
+..|. ...|......|...+++..+...
T Consensus 161 ~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~ 191 (393)
T 4b4t_O 161 DSIPLRITNSFYSTNSQYFKFKNDFNSFYYT 191 (393)
T ss_dssp CCSSSHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 23332 23455566667777777665443
No 377
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=22.79 E-value=2.5e+02 Score=21.31 Aligned_cols=110 Identities=12% Similarity=0.102 Sum_probs=49.9
Q ss_pred HHHHHHhcCchhhHHHHHHHHHhcCCCC---cHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHHhcCCCCCHH-
Q 021791 10 LIYGWCKINRIDMAERFLGEMIERGVEP---NVVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMRVRGIEPDVT- 85 (307)
Q Consensus 10 li~~~~~~g~~~~a~~~~~~~~~~~~~p---~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~- 85 (307)
.+...++.|+.+....++... +..+ |..-.+.|.. .+. .|+. ++++.+.+.|..++..
T Consensus 27 ~L~~A~~~g~~~~v~~ll~~~---~~~~~~~d~~g~t~L~~-A~~----------~g~~----~~v~~Ll~~g~~~~~~~ 88 (351)
T 3utm_A 27 ELLEAARSGNEEKLMALLTPL---NVNCHASDGRKSTPLHL-AAG----------YNRV----RIVQLLLQHGADVHAKD 88 (351)
T ss_dssp HHHHHHHHTCHHHHHHHCCTT---TTTCCCSSTTCCCHHHH-HHH----------TTCH----HHHHHHHHTTCCTTCCC
T ss_pred hHHHHHHcCCHHHHHHHHHhc---CCCcccCCCCCCCHHHH-HHH----------cCCH----HHHHHHHHcCCCCCccC
Confidence 344555678877777776532 2222 2222233333 334 2333 3344445555444322
Q ss_pred --HHHHHHHHHHhcCCchhHHHHHHHHHHcCCCCchhh--HHHHHHHHHhcCChHHHHHHH
Q 021791 86 --SFSIVLHVYSRAHKPQLSLDKLNFMKEKGICPTVAT--YTSVVKCLCSCGRIEDAEELL 142 (307)
Q Consensus 86 --~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~ll~~~~~~~~~~~a~~~~ 142 (307)
-.+ .+...+..|+.+ +++.+.+.|..++... -.+.+...+..|+.+-+..++
T Consensus 89 ~~g~t-~L~~A~~~g~~~----iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 144 (351)
T 3utm_A 89 KGGLV-PLHNACSYGHYE----VTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLL 144 (351)
T ss_dssp TTCCC-HHHHHHHTTCHH----HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCc-HHHHHHHCCCHH----HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 222 334445566644 4445555565443221 112344445667765544443
No 378
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=22.06 E-value=2.1e+02 Score=21.63 Aligned_cols=48 Identities=8% Similarity=0.112 Sum_probs=22.3
Q ss_pred CcHHHHHHHHHHHHHc-CCCCcHhhHHHHHHHHhhchhHHHHHHHHHHh
Q 021791 239 QKWKEACQYFVEMIEK-GLLPQKVTFETLYRGLIQSDMLRTWRRLKKKL 286 (307)
Q Consensus 239 g~~~~a~~~~~~~~~~-~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~ 286 (307)
.++.....++..|... .-.|+......++++|.+.-+-..|++.++..
T Consensus 187 eRF~av~~vL~~mV~~l~~~ps~RLLKhiircYlRLsdn~rar~aL~~~ 235 (268)
T 2fv2_A 187 ERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQC 235 (268)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCHHHHHHHHHh
Confidence 3444444444444433 22344445555555555555444555544443
No 379
>2qfz_A TBC1 domain family member 22A; RAB-GAP, GTPase activator, structural genomics, structural genomics consortium, SGC, hydrolase activator; 2.10A {Homo sapiens} PDB: 3dzx_A
Probab=22.04 E-value=2.5e+02 Score=21.94 Aligned_cols=79 Identities=5% Similarity=0.064 Sum_probs=54.6
Q ss_pred HHHHHHHhCCCCCCHhhHHHHHHHHhcCCChhHHHHHHHHHhhcCCCCcc-HHHH--HHHHHHH----HhcCcHHHHHHH
Q 021791 140 ELLGEMVRNGVSPSAETYNCFFKEYRGRKDANGAMKLYRQMKEDDLCVPN-IHTY--NILIGMF----MALNRMDMVREI 212 (307)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~--~~l~~~~----~~~~~~~~a~~~ 212 (307)
++++.+.+.|+.|...++..++..+.+.=.++.+.++|+.+...+. ... ...+ .+++..+ ....++++...+
T Consensus 230 ~L~~hL~~~~i~~~~f~~~W~~~lF~~~~p~~~~lrlWD~~l~~g~-~~~~~~~~v~~AiL~~~~~~ll~~~d~~~il~~ 308 (345)
T 2qfz_A 230 QVHRHLDQHEVRYLQFAFRWMNNLLMREVPLRCTIRLWDTYQSEPD-GFSHFHLYVCAAFLVRWRKEILEEKDFQELLLF 308 (345)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHTTTTTTSCHHHHHHHHHHHTTSTT-TTTTHHHHHHHHHHHHTHHHHHHCCCHHHHHHH
T ss_pred HHHHHHHHcCCchhhHHHHHHHHHHcccCCHHHHHHHHHHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHhhCCHHHHHHH
Confidence 4566677778888888888888888888888999999999998763 222 2222 2222222 235778888888
Q ss_pred HHHHhhC
Q 021791 213 WNHVKGS 219 (307)
Q Consensus 213 ~~~~~~~ 219 (307)
++.+...
T Consensus 309 L~~~p~~ 315 (345)
T 2qfz_A 309 LQNLPTA 315 (345)
T ss_dssp HTSCSCT
T ss_pred HHcCCCc
Confidence 8776654
No 380
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=21.62 E-value=3.3e+02 Score=22.52 Aligned_cols=65 Identities=14% Similarity=0.179 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHhcCchhhHHHHHHHHHhcCCCCc--------HHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHHHHHHH
Q 021791 5 KMYTSLIYGWCKINRIDMAERFLGEMIERGVEPN--------VVTYNVLLNGVCRRASLHPNERFEKTIRNAEKVFDEMR 76 (307)
Q Consensus 5 ~~~~~li~~~~~~g~~~~a~~~~~~~~~~~~~p~--------~~~~~~ll~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 76 (307)
...|.+...|.+.|+...+..++..+...+..|+ ..+|.-.+.-+.-. .+++.+|.+-+....
T Consensus 177 ~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~---------~~~y~~A~~~L~~A~ 247 (455)
T 3t5v_B 177 YLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLL---------NSQVHNAFVQFNEAF 247 (455)
T ss_dssp HHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHH---------TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHH---------HccHHHHHHHHHHHH
Confidence 3567889999999999999999999988766332 23444444333221 566677777666654
Q ss_pred hc
Q 021791 77 VR 78 (307)
Q Consensus 77 ~~ 78 (307)
..
T Consensus 248 ~~ 249 (455)
T 3t5v_B 248 QS 249 (455)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 381
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=21.36 E-value=1.7e+02 Score=21.81 Aligned_cols=84 Identities=13% Similarity=0.163 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHhcCC-------CCCHHHHHHHHHHHHhcC---------CchhHHHHHHHHHHcCCCC-chhhHHHHH
Q 021791 64 TIRNAEKVFDEMRVRGI-------EPDVTSFSIVLHVYSRAH---------KPQLSLDKLNFMKEKGICP-TVATYTSVV 126 (307)
Q Consensus 64 ~~~~a~~~~~~~~~~~~-------~~~~~~~~~ll~~~~~~~---------~~~~a~~~~~~~~~~~~~~-~~~~~~~ll 126 (307)
..+.|..++.+|--..+ .....-|..+..+|.+.| +.+...++++...+.|++- =+..|+++|
T Consensus 169 ~vetAiaml~dmG~~SvKffPM~Gl~~leEl~avAkAca~~g~~lEPTGGIdl~Nf~~I~~i~l~aGv~~viPHIYsSII 248 (275)
T 3m6y_A 169 PIKTAIALVRDMGGNSLKYFPMKGLAHEEEYRAVAKACAEEGFALEPTGGIDKENFETIVRIALEANVEQVIPHVYSSII 248 (275)
T ss_dssp EHHHHHHHHHHHTCCEEEECCCTTTTTHHHHHHHHHHHHHHTCEEEEBSSCCTTTHHHHHHHHHHTTCSCBCCEECGGGB
T ss_pred eHHHHHHHHHHcCCCeeeEeecCCcccHHHHHHHHHHHHHcCceECCCCCccHhHHHHHHHHHHHcCCCeecccccceec
Confidence 36788888888854421 235667888889998876 3456677777777777531 244566666
Q ss_pred HHHHhcCChHHHHHHHHHHHh
Q 021791 127 KCLCSCGRIEDAEELLGEMVR 147 (307)
Q Consensus 127 ~~~~~~~~~~~a~~~~~~~~~ 147 (307)
+--.-.-+++++.+++..+++
T Consensus 249 Dk~TG~TrpedV~~ll~~~K~ 269 (275)
T 3m6y_A 249 DKETGNTKVEAVRELLAVVKK 269 (275)
T ss_dssp CTTTCCBCHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHH
Confidence 655555577777777776654
No 382
>3qye_A TBC1 domain family member 1; rabgap, RAB, myocytes, hydrolase activator; 2.20A {Homo sapiens} PDB: 3qyb_A
Probab=21.00 E-value=2.9e+02 Score=21.36 Aligned_cols=131 Identities=11% Similarity=0.151 Sum_probs=79.1
Q ss_pred CchhHHHHHHHHHHc-C----CCCchhhHHH---HHHHHHhcCChHHHHHHHHHHHhCCCCCCHhhHHHHHHHHhcCCCh
Q 021791 99 KPQLSLDKLNFMKEK-G----ICPTVATYTS---VVKCLCSCGRIEDAEELLGEMVRNGVSPSAETYNCFFKEYRGRKDA 170 (307)
Q Consensus 99 ~~~~a~~~~~~~~~~-~----~~~~~~~~~~---ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 170 (307)
+-+.|..++..+... + ..|+...... .+..+.+.-+ -++++.+.+.|+.|...++..++..+.+.=.+
T Consensus 164 ~E~~aF~~l~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~----p~L~~hL~~~~i~~~~~~~~W~l~lF~~~lp~ 239 (331)
T 3qye_A 164 SEEEAFKMLKFLMFDMGLRKQYRPDMIILQIQMYQLSRLLHDYH----RDLYNHLEEHEIGPSLYAAPWFLTMFASQFPL 239 (331)
T ss_dssp CHHHHHHHHHHHHTTTCGGGGGSTTCHHHHHHHHHHHHHHHHHC----HHHHHHHHHTTCCGGGTSHHHHHSTTTTTSCH
T ss_pred hHHHHHHHHHHHHHhcCchhcCCCChHHHHHHHHHHHHHHHHHH----HHHHHHHHHcCCChHHHHHHHHHHHhhhhCCH
Confidence 456788888877643 2 2233222221 1222222222 25677778889999888999999999888889
Q ss_pred hHHHHHHHHHhhcCCCCccHHHHH--HHHHH----HHhcCcHHHHHHHHHHHhhCCCCCCHHhHHHHHHHHHccC
Q 021791 171 NGAMKLYRQMKEDDLCVPNIHTYN--ILIGM----FMALNRMDMVREIWNHVKGSELGLDLDSYTMLIHGLCEKQ 239 (307)
Q Consensus 171 ~~a~~~~~~~~~~~~~~~~~~~~~--~l~~~----~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~li~~~~~~g 239 (307)
+.+.++|+.+...|. . ...+. +++.. .....+.++....+..... ..+......++.-.....
T Consensus 240 ~~~lrlwD~~l~~g~-~--~l~~valaiL~~~~~~ll~~~~~~~il~~l~~~~p---~~~~~di~~li~~A~~l~ 308 (331)
T 3qye_A 240 GFVARVFDMIFLQGT-E--VIFKVALSLLGSHKPLILQHENLETIVDFIKSTLP---NLGLVQMEKTINQVFEMD 308 (331)
T ss_dssp HHHHHHHHHHHHHCT-T--HHHHHHHHHHHHTHHHHHTCCSHHHHHHHHHHTTT---CCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHCCc-H--HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhCC---CCCHHHHHHHHHHHHhCC
Confidence 999999999998863 2 32222 22222 2234577777777776433 235555555554433333
No 383
>3d5l_A Regulatory protein RECX; PSI-II, NYSGXRC, DNA repair, 10123K, structural genomi protein structure initiative; 2.35A {Lactobacillus reuteri}
Probab=20.72 E-value=2.5e+02 Score=20.38 Aligned_cols=51 Identities=10% Similarity=0.106 Sum_probs=27.9
Q ss_pred chhHHHHHHHHHHcCCCCchhhHHHHHHHHHhcCChHHHHHHHHHHHhCCCC
Q 021791 100 PQLSLDKLNFMKEKGICPTVATYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 151 (307)
Q Consensus 100 ~~~a~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~ 151 (307)
.+.+..++..+.+.|.-.|...-...+....+.+.+ ....+-.++...|+.
T Consensus 92 ~e~i~~vl~~L~~~g~ldD~rfA~~~v~~~~~~~~~-G~~~I~~eL~~KGI~ 142 (221)
T 3d5l_A 92 EEFVEPILKKLRGQQLIDDHAYAASYVRTMINTDLK-GPGIIRQHLRQKGIG 142 (221)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhccc-cHHHHHHHHHHcCCC
Confidence 345566777777777664544444555554442221 244555666667764
No 384
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A
Probab=20.63 E-value=2.9e+02 Score=22.18 Aligned_cols=73 Identities=7% Similarity=0.045 Sum_probs=0.0
Q ss_pred CCHHhHHHHHHHHHccCc--HHHHHHHHHHHHHcCCCCcHhhHHHHHHHHhhchhHHHHHHHHHHhhhcCCCCCcc
Q 021791 223 LDLDSYTMLIHGLCEKQK--WKEACQYFVEMIEKGLLPQKVTFETLYRGLIQSDMLRTWRRLKKKLDEESITFGSE 296 (307)
Q Consensus 223 ~~~~~~~~li~~~~~~g~--~~~a~~~~~~~~~~~~~p~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~~~~~~~ 296 (307)
++..+|..++..+...++ .+++..+++.+.+ |-.++...=..|+....+--..++...+.+-|++.+..++..
T Consensus 21 ~~~~t~~~il~~l~~g~~Ls~eEa~~~~~~i~~-G~~~~~QiaAfL~Alr~kGet~eEi~g~~~am~~~~~~v~~~ 95 (377)
T 3r88_A 21 ASVPSWPQILGRLTDNRDLARGQAAWAMDQIMT-GNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPAD 95 (377)
T ss_dssp ---CCHHHHHHHHHTTCCCCTTHHHHHHHHHHT-TCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCTT
T ss_pred CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHhCCcCCCc
No 385
>3l6a_A Eukaryotic translation initiation factor 4 gamma; C-terminal region, MA2 domain, W2 domain, EIF4G2, EIF family translation; HET: MES PG4; 2.00A {Homo sapiens}
Probab=20.28 E-value=3.3e+02 Score=21.66 Aligned_cols=61 Identities=21% Similarity=0.225 Sum_probs=38.5
Q ss_pred hHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCC---HhhHHHHHHHHhcCCCh--hHHHHHHHHHhhcCC
Q 021791 121 TYTSVVKCLCSCGRIEDAEELLGEMVRNGVSPS---AETYNCFFKEYRGRKDA--NGAMKLYRQMKEDDL 185 (307)
Q Consensus 121 ~~~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~--~~a~~~~~~~~~~~~ 185 (307)
....++.-|...|+.++|.+.++++.. |+ ......++......++. +.+-.++..+...+.
T Consensus 14 ~~~~ii~EY~~~~D~~Ea~~~l~eL~~----p~~~~~~~v~~~i~~aLer~~~~re~~~~LL~~L~~~~~ 79 (364)
T 3l6a_A 14 LTETVVTEYLNSGNANEAVNGVREMRA----PKHFLPEMLSKVIILSLDRSDEDKEKASSLISLLKQEGI 79 (364)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTC----CGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhCC----chhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHCCC
Confidence 456788899999999999999999853 33 22333333333333332 446666666666554
Done!