BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021793
(307 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54UF8|SERIC_DICDI Probable serine incorporator OS=Dictyostelium discoideum GN=serinc
PE=3 SV=1
Length = 417
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 142/269 (52%), Gaps = 13/269 (4%)
Query: 33 ARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKNC-QGGHHCLGAQGVLRVSLGCFVFY 91
R VY + FL+ +++A+++ ++ + ++ LK C +G + C GA V R++ G +++
Sbjct: 22 TRLVYVVFFLLVSIVAYILSYWTFSWFNNLDVLKICSKGDNECKGALVVYRLTFGLALYH 81
Query: 92 IIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPSSFIQLYGEIAHFGAGV 151
I++ L+ +R G+W KI+L L + F +P+SF ++Y I+ F A +
Sbjct: 82 ILLGLVMINVKSAGDSRAKLQDGYWPLKILLLGVLIFVSFFIPNSFFRVYTWISIFSAAI 141
Query: 152 FLLIQLISVISFITWLNDCCLSEKNAE-----RCHIHVMLIATVAYIICIVGIIMMYIWY 206
F+ IQL+ +I LN+ C+ + E + ++ + +++ + + + G ++M ++Y
Sbjct: 142 FIFIQLVLLIECAYSLNESCVRKIEDEGHSGKKWYVLLCVLSFGSIALAVAGTVLMLVFY 201
Query: 207 TPDPTCLLNIFFITWTLVLLQLMTSVSLHPKI-----NSGFLAPGLMGLYIIFLCWCAIR 261
+C +N F+I + L + ++ +S+ K+ +SG G++ LY +L + AI
Sbjct: 202 GRG-SCSINQFYIVFNLGICLIVGVLSISEKVREYRPSSGLFQSGVVMLYCTYLIYSAIN 260
Query: 262 SEPAGETCNRKAEASNKTDWLTIIVILII 290
SEP G TC+ +S K + I + I
Sbjct: 261 SEPPG-TCSSNNTSSPKESTIIIGAVFTI 288
>sp|Q13530|SERC3_HUMAN Serine incorporator 3 OS=Homo sapiens GN=SERINC3 PE=2 SV=2
Length = 473
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 132/271 (48%), Gaps = 31/271 (11%)
Query: 26 NGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKN-CQGG-----------HH 73
N N + R +YA I L++ +++++++ T ++K+ C+GG
Sbjct: 31 NSKNSTVTRLIYAFILLLSTVVSYIMQ--RKEMETYLKKIPGFCEGGFKIHEADINADKD 88
Query: 74 C---LGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIP 130
C +G + V R+S +F+ + LL R H+G+W KI I + +
Sbjct: 89 CDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDLRAAVHNGFWFFKIAALIGIMVGS 148
Query: 131 FLLPSS-FIQLYGEIAHFGAGVFLLIQLISVISFI-----TWLNDCCLSEKNAERCHIHV 184
F +P F ++ + GA +F+LIQL+ ++ F +W+N + E N + +
Sbjct: 149 FYIPGGYFSSVWFVVGMIGAALFILIQLVLLVDFAHSWNESWVNR--MEEGNPRLWYAAL 206
Query: 185 MLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKIN----- 239
+ + YI+ I+ + ++Y +YT C N FFI+ L+L + + +S+HPKI
Sbjct: 207 LSFTSAFYILSIICVGLLYTYYTKPDGCTENKFFISINLILCVVASIISIHPKIQEHQPR 266
Query: 240 SGFLAPGLMGLYIIFLCWCAIRSEPAGETCN 270
SG L L+ LY ++L W A+ +EP +CN
Sbjct: 267 SGLLQSSLITLYTMYLTWSAMSNEP-DRSCN 296
>sp|Q5R533|SERC3_PONAB Serine incorporator 3 OS=Pongo abelii GN=SERINC3 PE=2 SV=1
Length = 473
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 132/271 (48%), Gaps = 31/271 (11%)
Query: 26 NGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKN-CQGG-----------HH 73
N N + R +YA I L++ +++++++ T ++K+ C+GG
Sbjct: 31 NSKNSTVTRLIYAFILLLSTVVSYIMQ--RKEMETYLKKIPGFCEGGFKIHEADINADKD 88
Query: 74 C---LGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIP 130
C +G + V R+S +F+ + LL R H+G+W KI I + +
Sbjct: 89 CDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDPRAAVHNGFWFFKIAALIGIMVGS 148
Query: 131 FLLPSS-FIQLYGEIAHFGAGVFLLIQLISVISFI-----TWLNDCCLSEKNAERCHIHV 184
F +P F ++ + GA +F+LIQL+ ++ F +W+N + E N + +
Sbjct: 149 FYIPGGYFSSVWFVVGMIGAALFILIQLVLLVDFAHSWNESWVNR--MEEGNPRLWYAAL 206
Query: 185 MLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKIN----- 239
+ + YI+ I+ + ++Y +YT C N FFI+ L+L + + +S+HPKI
Sbjct: 207 LSFTSAFYILSIICVGLLYTYYTKPDGCTENKFFISINLILCVVASIISIHPKIQEHQPR 266
Query: 240 SGFLAPGLMGLYIIFLCWCAIRSEPAGETCN 270
SG L ++ LY ++L W A+ +EP +CN
Sbjct: 267 SGLLQSSVITLYTMYLTWSAMSNEP-DRSCN 296
>sp|Q7TNK0|SERC1_RAT Serine incorporator 1 OS=Rattus norvegicus GN=Serinc1 PE=1 SV=1
Length = 453
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 130/261 (49%), Gaps = 19/261 (7%)
Query: 26 NGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKL----KNCQGGHHC---LGAQ 78
+G+N + R +YAL LV +A V+ ++ K+ +N +G C +G +
Sbjct: 31 SGNNSTVTRLIYALFLLVGVCVACVM--LIPGMEEQLNKIPGFCENEKGVVPCNILVGYK 88
Query: 79 GVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPS-SF 137
V R+ G +FY+++ LL R H+G+W K +A+ I F +P +F
Sbjct: 89 AVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFATAVAIIIGAFFIPEGTF 148
Query: 138 IQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLS--EKNAERCHIHVMLIAT-VAYII 194
++ + GA F+LIQL+ +I F N+ + E+ RC +L AT + Y++
Sbjct: 149 TTVWFYVGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLL 208
Query: 195 CIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKIN-----SGFLAPGLMG 249
+V II+ +++YT +C N FI+ ++L + +S+ PKI SG L ++
Sbjct: 209 SLVAIILFFVYYTHPASCSENKAFISVNMLLCIGASVMSILPKIQESQPRSGLLQSSVIT 268
Query: 250 LYIIFLCWCAIRSEPAGETCN 270
+Y ++L W A+ +EP CN
Sbjct: 269 IYTMYLTWSAMTNEPE-TNCN 288
>sp|Q9QZI8|SERC1_MOUSE Serine incorporator 1 OS=Mus musculus GN=Serinc1 PE=1 SV=1
Length = 453
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 130/261 (49%), Gaps = 19/261 (7%)
Query: 26 NGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKL----KNCQGGHHC---LGAQ 78
+G+N + R +YAL LV +A V+ ++ K+ +N +G C +G +
Sbjct: 31 SGNNSTVTRLIYALFLLVGVCVACVM--LIPGMEEQLNKIPGFCENEKGVVPCNILVGYK 88
Query: 79 GVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPS-SF 137
V R+ G +FY+++ LL R H+G+W K +A+ I F +P +F
Sbjct: 89 AVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFATAVAIIIGAFFIPEGTF 148
Query: 138 IQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLS--EKNAERCHIHVMLIAT-VAYII 194
++ + GA F+LIQL+ +I F N+ + E+ RC +L AT + Y++
Sbjct: 149 TTVWFYVGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLL 208
Query: 195 CIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKIN-----SGFLAPGLMG 249
+V +++ +++YT +C N FI+ ++L + +S+ PKI SG L ++
Sbjct: 209 SLVAVVLFFVYYTHPASCAENKAFISVNMLLCIGASVMSILPKIQESQPRSGLLQSSVIT 268
Query: 250 LYIIFLCWCAIRSEPAGETCN 270
+Y ++L W A+ +EP CN
Sbjct: 269 VYTMYLTWSAMTNEPE-TNCN 288
>sp|A7S4N4|SERIC_NEMVE Probable serine incorporator OS=Nematostella vectensis GN=serinc
PE=3 SV=1
Length = 456
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 118/231 (51%), Gaps = 15/231 (6%)
Query: 75 LGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLP 134
+G V RV G F+++ LL G + R +G+W KI+L++ + F +P
Sbjct: 87 VGYLAVYRVCFGLAAFFLLFCLLMYGVTSSRDVRSKIQNGFWGIKILLFLGAIVAAFFIP 146
Query: 135 S-SFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLS--EKNAERCHIHVMLIAT-V 190
F +++ G+ +F+LIQL+ ++ F N + E++ + ++L AT +
Sbjct: 147 QGKFSEVWMYFGLIGSFLFILIQLVLLVDFAHTWNSSWVGRMEESGSKVWAVLLLCATFL 206
Query: 191 AYIICIVGIIMMYIW--YTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKIN-----SGFL 243
Y C+ GI+ +Y++ Y+ + +C N FFI++ L+L + + +++HPK+ SG L
Sbjct: 207 MYGFCVAGIVCLYVYFTYSQESSCHTNKFFISFNLILCIIASVLAIHPKVQERLPTSGLL 266
Query: 244 APGLMGLYIIFLCWCAIRSEPAGETCNRKAEAS---NKTDWLTIIVILIIF 291
++ LY ++L W A+ +P + CN E D II ++++F
Sbjct: 267 QASVISLYTVYLTWSALSFQP-DKNCNGFYETHITLAGMDSQAIIGVILMF 316
>sp|A4FUZ5|SERC3_BOVIN Serine incorporator 3 OS=Bos taurus GN=SERINC3 PE=2 SV=1
Length = 472
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 30/270 (11%)
Query: 26 NGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKN-CQGG----------HHC 74
N N + R +YA I + ++ ++ + T+++K+ C G C
Sbjct: 31 NSKNSTLTRLIYAFILFLGTIVCCIM--FHEGMETQLKKIPGFCDEGLSTRITDIMDKEC 88
Query: 75 ---LGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPF 131
+ + V R+S VF+ LL R H+G+W KI + + + F
Sbjct: 89 DVLVRYKAVYRISFALAVFFFAFSLLMLNVKTSKDPRAAIHNGFWFFKIAAIVGVMVGSF 148
Query: 132 LLPSS-FIQLYGEIAHFGAGVFLLIQLISVISFI-----TWLNDCCLSEKNAERCHIHVM 185
+P F + I GA F+LIQL+ ++ F +W+N + E N + + ++
Sbjct: 149 YIPGGHFNTAWFVIGMVGAAFFILIQLVLLVDFAHSWNESWVNR--MEEGNPKCWYAALL 206
Query: 186 LIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKIN-----S 240
+ ++ YI+ I+ ++Y +YT C N FFI++ L+L +++ +S+HPKI S
Sbjct: 207 SVTSLFYILSIIFAGLLYTYYTKPDGCTENKFFISFNLILCVVISVLSIHPKIQEHQPRS 266
Query: 241 GFLAPGLMGLYIIFLCWCAIRSEPAGETCN 270
G L L+ LY ++L W A+ +EP +CN
Sbjct: 267 GLLQSSLITLYTMYLTWSAMSNEP-DRSCN 295
>sp|Q12116|TMS1_YEAST Membrane protein TMS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TMS1 PE=1 SV=1
Length = 473
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 125/269 (46%), Gaps = 16/269 (5%)
Query: 34 RYVYALIFLVANLLAWVVRDYSSAALTEMEKLKNCQGGHHCLGAQGVLRVSLGCFVFYII 93
R +YA+ L+ +L++WV SA + + K C G C G V R++ ++I
Sbjct: 43 RLLYAVWLLLNSLISWVSY---SANKSILWPGKTCTGTGEC-GFFTVHRLNFALGCLHLI 98
Query: 94 MFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPSSFIQLYGEIAHFGAG-VF 152
+ L+ G + R + WWS K +L++ L ++ F++P+ F + + +G +F
Sbjct: 99 LALVLTGVKSTNDVRAALQNSWWSLKFILYLCLIVLSFVIPNDFYIFFSKWVSVPSGAIF 158
Query: 153 LLIQLISVISFITWLNDCCLSEKNAERCHIH-----VMLIATVAYIICIVGIIMMYIWYT 207
+L+ LI ++ F + C+S +E ++L T Y I+ ++MY+ +
Sbjct: 159 ILVGLILLVDFAHEWAETCISHVESEDEDSSFWQRFLVLGTTSMYTASIIMTVVMYVMFC 218
Query: 208 PDPTCLLNIFFITWTLVLLQLMTSVSLHPKIN-----SGFLAPGLMGLYIIFLCWCAIRS 262
C +N +T L+L + +S++PKI SG ++ +Y +L A+ S
Sbjct: 219 HQQ-CNMNQTAVTVNLILTVITLVLSVNPKIQEANPKSGLAQSSMVSVYCTYLTMSAMSS 277
Query: 263 EPAGETCNRKAEASNKTDWLTIIVILIIF 291
EP + CN +S + I+ L F
Sbjct: 278 EPDDKMCNPLVRSSGTRKFSIILGSLFTF 306
>sp|Q3MHV9|SERC1_BOVIN Serine incorporator 1 OS=Bos taurus GN=SERINC1 PE=2 SV=1
Length = 453
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 19/261 (7%)
Query: 26 NGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKL----KNCQGGHHC---LGAQ 78
+G+N + R +YAL LV +A V+ ++ K+ +N +G C +G +
Sbjct: 31 SGNNSTVTRLIYALFLLVGVCVACVM--LIPGMEEQLNKIPGFCENEKGMVPCNILVGYK 88
Query: 79 GVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPS-SF 137
V R+ G +FY+++ LL R H+G+W K IA+ I F +P +F
Sbjct: 89 AVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAIHNGFWFFKFAAAIAIIIGAFFIPEGTF 148
Query: 138 IQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLS--EKNAERCHIHVMLIAT-VAYII 194
++ + GA F+LIQL+ +I F N+ + E+ RC +L AT + Y++
Sbjct: 149 TTVWFYVGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLL 208
Query: 195 CIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKIN-----SGFLAPGLMG 249
+V +++ +++YT +C N FI+ ++L + +S+ PKI SG L ++
Sbjct: 209 SLVAVVLFFVYYTHPASCAENKAFISVNMLLCLGASIMSILPKIQESQPRSGLLQSSVIT 268
Query: 250 LYIIFLCWCAIRSEPAGETCN 270
+Y ++L W A+ +EP E CN
Sbjct: 269 VYTMYLTWSAMTNEPETE-CN 288
>sp|Q9NRX5|SERC1_HUMAN Serine incorporator 1 OS=Homo sapiens GN=SERINC1 PE=1 SV=1
Length = 453
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 130/261 (49%), Gaps = 19/261 (7%)
Query: 26 NGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKL----KNCQGGHHC---LGAQ 78
+G+N + R +YAL LV +A V+ ++ K+ +N +G C +G +
Sbjct: 31 SGNNSTVTRLIYALFLLVGVCVACVM--LIPGMEEQLNKIPGFCENEKGVVPCNILVGYK 88
Query: 79 GVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPS-SF 137
V R+ G +FY+++ LL R H+G+W K IA+ I F +P +F
Sbjct: 89 AVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFAAAIAIIIGAFFIPEGTF 148
Query: 138 IQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLS--EKNAERCHIHVMLIAT-VAYII 194
++ + GA F+LIQL+ +I F N+ + E+ RC +L AT + Y++
Sbjct: 149 TTVWFYVGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLL 208
Query: 195 CIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKIN-----SGFLAPGLMG 249
+V I++ +++YT +C N FI+ ++L + +S+ PKI SG L ++
Sbjct: 209 SLVAIVLFFVYYTHPASCSENKAFISVNMLLCVGASVMSILPKIQESQPRSGLLQSSVIT 268
Query: 250 LYIIFLCWCAIRSEPAGETCN 270
+Y ++L W A+ +EP CN
Sbjct: 269 VYTMYLTWSAMTNEPE-TNCN 288
>sp|Q5R419|SERC1_PONAB Serine incorporator 1 OS=Pongo abelii GN=SERINC1 PE=2 SV=1
Length = 453
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 130/261 (49%), Gaps = 19/261 (7%)
Query: 26 NGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKL----KNCQGGHHC---LGAQ 78
+G+N + R +YAL LV +A V+ ++ K+ +N +G C +G +
Sbjct: 31 SGNNSTVTRLIYALFLLVGVCVACVM--LIPGMEEQLNKIPGFCENEKGVVPCNILVGYK 88
Query: 79 GVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPS-SF 137
V R+ G +FY+++ LL R H+G+W K IA+ I F +P +F
Sbjct: 89 AVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWFFKFAAAIAIIIGAFFIPEGTF 148
Query: 138 IQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLS--EKNAERCHIHVMLIAT-VAYII 194
++ + GA F+LIQL+ +I F N+ + E+ RC +L AT + Y++
Sbjct: 149 TTVWFYVGMAGAFCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLL 208
Query: 195 CIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKIN-----SGFLAPGLMG 249
+V I++ +++YT +C N FI+ ++L + +S+ PKI SG L ++
Sbjct: 209 SLVAIVLFFVYYTHPASCSENKAFISVNMLLCIGASVMSILPKIQESQPRSGLLQSSVIT 268
Query: 250 LYIIFLCWCAIRSEPAGETCN 270
+Y ++L W A+ +EP CN
Sbjct: 269 VYTMYLTWSAMTNEPE-TNCN 288
>sp|Q9QZI9|SERC3_MOUSE Serine incorporator 3 OS=Mus musculus GN=Serinc3 PE=1 SV=2
Length = 472
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 124/268 (46%), Gaps = 31/268 (11%)
Query: 29 NPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKN-CQGGHHC------------- 74
N + R +YA I + +++ ++ + T+++K+ C+GG
Sbjct: 34 NSTVTRLIYAFILFLGTIVSCIMM--TEGIQTQLKKIPGFCEGGFQIKMVDTKAEKDCDV 91
Query: 75 -LGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLL 133
+G + V R++ +F+ FLL R H+G+W KI I + I F +
Sbjct: 92 LVGFKAVYRINFAVAIFFFAFFLLMLKVKTSKDPRAAVHNGFWFFKIAAIIGIMIGSFYI 151
Query: 134 PS-SFIQLYGEIAHFGAGVFLLIQLISVISFI-----TWLNDCCLSEKNAERCHIHVMLI 187
P SF +++ GA F++IQL+ ++ W+N + E N + ++
Sbjct: 152 PGGSFTEVWFVAGMLGASFFIIIQLVLLVDMAHSWNELWVNR--MEEGNPRLWYAALLSF 209
Query: 188 ATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKIN-----SGF 242
++ YI+ IV ++Y++YT C N FI+ L+ ++ VS+ PK+ SG
Sbjct: 210 TSLFYILSIVFAALLYVFYTKPDDCTENKVFISLNLIFCVAVSIVSILPKVQEHQPRSGL 269
Query: 243 LAPGLMGLYIIFLCWCAIRSEPAGETCN 270
L ++ LY ++L W A+ +EP +CN
Sbjct: 270 LQSSIITLYTLYLTWSAMTNEPE-RSCN 296
>sp|Q9HDY3|YK17_SCHPO Membrane protein PB1A10.07c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAPB1A10.07c PE=3 SV=1
Length = 441
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 20/266 (7%)
Query: 37 YALIFLVANLLAWVVRDYSSAALTEMEKLK------NCQGGHHCLGAQGVLRVSLGCFVF 90
YA+++ V +LL+W + SS +++ KL +CQ C V R+S +F
Sbjct: 47 YAVLYFVNSLLSWCM--LSSWFNSKLSKLSAGYLQFDCQNDGKCYSVIAVHRLSFTLVMF 104
Query: 91 YIIM-FLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPSSFIQLYGE-IAHFG 148
++ + F+L+ ++ + +G W KIVLW L I F +P+ F+ +G I+ G
Sbjct: 105 HLFLAFILSLCNTRSRVAIKI-QNGLWPFKIVLWFVLGIFSFFIPTKFLSFWGNIISVMG 163
Query: 149 AGVFLLIQLISVISFI-TWLNDCCLSEKNAERCHIHVMLIATVA--YIICIVGIIMMYIW 205
+ +F++ L+ ++ F TW C ++ LI + Y++ +V I+ Y++
Sbjct: 164 SALFIVYGLMLLVDFAHTWAERCVDRVLTSDSSSSKFYLIGSTVGMYVVGLVLTILTYVF 223
Query: 206 YTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKIN-----SGFLAPGLMGLYIIFLCWCAI 260
+ +C N T L+L ++ +S+HP I SG ++ Y +L A+
Sbjct: 224 FCAS-SCSFNQAINTINLLLCIAVSCLSVHPTIQEYNPRSGLAQSSMVMCYTCYLILSAL 282
Query: 261 RSEPAGETCNRKAEASNKTDWLTIIV 286
+ P CN +++ T + ++
Sbjct: 283 ANRPDEGQCNPWGNSASGTREFSKVI 308
>sp|Q86VE9|SERC5_HUMAN Serine incorporator 5 OS=Homo sapiens GN=SERINC5 PE=2 SV=1
Length = 423
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 117/249 (46%), Gaps = 17/249 (6%)
Query: 34 RYVYALIFLVANLLAWVVRDYSSAALTEM------EKLKNCQGGHHC---LGAQGVLRVS 84
R++YAL F++ +L ++ + A + + K + G C +G V RV
Sbjct: 36 RFMYALYFILVVVLCCIMMSTTVAHKMKEHIPFFEDMCKGIKAGDTCEKLVGYSAVYRVC 95
Query: 85 LGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLP--SSFIQLYG 142
G F+ I LLT + R H+G+W K++L A+ F +P +F+ +
Sbjct: 96 FGMACFFFIFCLLTLKINNSKSCRAHIHNGFWFFKLLLLGAMCSGAFFIPDQDTFLNAWR 155
Query: 143 EIAHFGAGVFLLIQLISVISFI-TWLNDCCLSEKNAERCHIHVMLIATVAYIICIVGIIM 201
+ G +F+ IQL+ ++ F W + + + + + L+ + Y I G+++
Sbjct: 156 YVGAVGGFLFIGIQLLLLVEFAHKWNKNWTAGTASNKLWYASLALVTLIMYSIATGGLVL 215
Query: 202 MYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHP-----KINSGFLAPGLMGLYIIFLC 256
M ++YT +C+ N + L L++ V++ P + +SG L G++ Y+ +L
Sbjct: 216 MAVFYTQKDSCMENKILLGVNGGLCLLISLVAISPWVQNRQPHSGLLQSGVISCYVTYLT 275
Query: 257 WCAIRSEPA 265
+ A+ S+PA
Sbjct: 276 FSALSSKPA 284
>sp|Q4R6L9|SERC5_MACFA Serine incorporator 5 OS=Macaca fascicularis GN=SERINC5 PE=2 SV=1
Length = 424
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 17/247 (6%)
Query: 36 VYALIFLVANLLAWVVRDYSSAALTEM------EKLKNCQGGHHC---LGAQGVLRVSLG 86
+YAL F++ +L ++ + A + + K + G C +G V RV G
Sbjct: 1 MYALYFILVVVLCCIMMSTTVAHKMKEHIPFFEDMCKGIKAGDTCEKLVGYSAVYRVCFG 60
Query: 87 CFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLP--SSFIQLYGEI 144
F+ I LLT + R H+G+W K++L A+ F +P +F+ + +
Sbjct: 61 MACFFFIFCLLTLKINNSKSCRAHIHNGFWFFKLLLLGAMCSGAFFIPDQDTFLNAWRYV 120
Query: 145 AHFGAGVFLLIQLISVISFI-TWLNDCCLSEKNAERCHIHVMLIATVAYIICIVGIIMMY 203
G +F+ IQL+ ++ F W + + + + + L+ + Y I G+++M
Sbjct: 121 GAVGGFLFIGIQLLLLVEFAHKWNKNWTAGTASNKLWYASLALVTLIMYSIATGGLVLMA 180
Query: 204 IWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKI-----NSGFLAPGLMGLYIIFLCWC 258
++YT C+ N + L L++ V++ P + +SG L G++ Y+ +L +
Sbjct: 181 VFYTQKDGCMENKILLGVNGGLCVLISLVAISPCVQNRQPHSGLLQSGVISCYVTYLTFS 240
Query: 259 AIRSEPA 265
A+ S+PA
Sbjct: 241 ALSSKPA 247
>sp|Q8BHJ6|SERC5_MOUSE Serine incorporator 5 OS=Mus musculus GN=Serinc5 PE=2 SV=1
Length = 461
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 66 KNCQGGHHC---LGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVL 122
K GG C +G V RV G F+ + LLT + R H+G+W K++L
Sbjct: 75 KTQAGGDACENLVGYSAVYRVCFGMACFFALFCLLTLKVNNSKSCRAYIHNGFWFFKLLL 134
Query: 123 WIALTIIPFLLPS--SFIQLYGEIAHFGAGVFLLIQLISVISFI-TWLNDCCLSEKNAER 179
A+ F +P +F++++ + G+ +F+ IQL+ ++ F W + +
Sbjct: 135 LGAMCSGAFFIPDQETFLKVWRYVGAGGSFLFICIQLLLIVQFAHKWNKNWTAGTVRNKL 194
Query: 180 CHIHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKI- 238
+ + L+ + Y + + G+ +M ++YT C+ N + L L++ V++ P +
Sbjct: 195 WYASLSLVTLIMYSVAVGGLALMAVFYTQWDDCMDNKILLGVHGGLCVLISLVAISPCVQ 254
Query: 239 ----NSGFLAPGLMGLYIIFLCWCAIRSEPAGETCNRKAE 274
+SG L GL+ Y+ +L + A+ S+P + + +
Sbjct: 255 NRQPHSGLLQSGLISCYVTYLTFSALTSKPEKKVLDEHGK 294
>sp|Q63175|SERC5_RAT Serine incorporator 5 OS=Rattus norvegicus GN=Serinc5 PE=2 SV=1
Length = 460
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 10/209 (4%)
Query: 66 KNCQGGHHC---LGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVL 122
K + G C +G V RV G F+ + +LT + R H+G+W K++L
Sbjct: 74 KGIKAGDTCENLVGYSAVYRVCFGMACFFFVFCVLTFKVNNSKSCRASIHNGFWFFKLLL 133
Query: 123 WIALTIIPFLLPS--SFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLSEKNAERC 180
A+ F +P +F+ ++ + G+ F+ IQL+ ++ F N + +
Sbjct: 134 LGAMCSGAFFIPDQETFLNVWRYVGAVGSFFFICIQLLLIVEFAHKWNKNWTAGTVRNKL 193
Query: 181 HIHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKI-- 238
+ +A + Y I + G+ +M ++YT C+ N + L L++ ++ P +
Sbjct: 194 WYASLSLALIMYSIAVGGLALMAVFYTQWDDCMDNKILLGVHGGLCVLISLAAISPCVQN 253
Query: 239 ---NSGFLAPGLMGLYIIFLCWCAIRSEP 264
+SG L PGL+ Y+ +L + A+ S+P
Sbjct: 254 RQPHSGLLQPGLISCYVTYLTFSALTSKP 282
>sp|Q803X0|SERC5_DANRE Serine incorporator 5 OS=Danio rerio GN=serinc5 PE=2 SV=1
Length = 460
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 117/249 (46%), Gaps = 19/249 (7%)
Query: 34 RYVYALIFLVANLLAWVVRDYSSAALTEMEKL----KNCQ---GGHHC---LGAQGVLRV 83
R++YAL F++ + V+ + + E + + CQ G +C +G V +V
Sbjct: 36 RFMYALFFMLVTVTC-VIMMSPTVEMAMREHIPFYSQMCQQLNAGENCSTLVGYSAVYKV 94
Query: 84 SLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPSS--FIQLY 141
G F+ + T G R H+G+W K V +A F LP+ F++++
Sbjct: 95 CFGMACFFFFFAVFTIRVQNSTGCRAAVHNGFWFFKFVALLACCAGGFFLPNQDQFLEVW 154
Query: 142 GEIAHFGAGVFLLIQLISVISFITWLNDCCLSEKNAERC-HIHVMLIATVAYIICIVGII 200
+ G +F++IQL+ ++ F N S + + + L+ V + + + G++
Sbjct: 155 RYVGAAGGFLFIIIQLMLLVQFAHRWNQNWSSGATYNKLWYAALALVTLVLFSVAVGGMV 214
Query: 201 MMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKIN-----SGFLAPGLMGLYIIFL 255
M+++YT C LN F+ L +++ +++ P I SG L P ++ LY+++L
Sbjct: 215 FMFMYYTHPEACFLNKIFLGVNGGLCFIVSLLAISPCIQTFQPTSGLLQPAVITLYVMYL 274
Query: 256 CWCAIRSEP 264
+ A+ S+P
Sbjct: 275 TFSALASKP 283
>sp|Q8K0E7|SERC2_MOUSE Serine incorporator 2 OS=Mus musculus GN=Serinc2 PE=2 SV=1
Length = 450
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 20/245 (8%)
Query: 47 LAWVVRDYSSAALTEMEKLKNCQGGHHC---LGAQGVLRVSLGCFVFYIIMFLLTAGTSK 103
L WV D + L QG C LG + V R+ F+ LL
Sbjct: 68 LPWVCEDRTQQPLV-------LQGPLDCGSLLGFRAVYRMCFATAAFFFFFMLLMICVRS 120
Query: 104 LHGTRDLWHSGWWSAKIVLWIALTIIPFLLPS-SFIQLYGEIAHFGAGVFLLIQLISVIS 162
R +G+W K ++ + +T+ F +P SF +++ G+ +F+LIQLI +
Sbjct: 121 SRDPRAAIQNGFWFFKFLILVGITVGAFYIPDGSFPKIWFYFGVVGSFLFILIQLILFVD 180
Query: 163 FITWLND---CCLSEKNAERCHIHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFI 219
F N C E ++ + + + Y++ I + +M+++YT C FI
Sbjct: 181 FAHSWNQRWLCKAEECDSPAWYAGLFFFTFLFYLLSIAAVALMFVYYTESGACHEGKVFI 240
Query: 220 TWTLVLLQLMTSVSLHPKI-----NSGFLAPGLMGLYIIFLCWCAIRSEPAGETCNRKAE 274
+ L ++ +++ PK+ NSG L ++ LY +F+ W A+ + P + CN
Sbjct: 241 SLNLTFCVCVSIIAVLPKVQDAQPNSGLLQASVITLYTMFVTWSALSNVP-DQKCNPHLP 299
Query: 275 ASNKT 279
N T
Sbjct: 300 TKNGT 304
>sp|A9UY97|SERIC_MONBE Probable serine incorporator OS=Monosiga brevicollis GN=serinc PE=3
SV=1
Length = 483
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 44/277 (15%)
Query: 28 SNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKNCQGGHHCL------------ 75
+N R YA++F ++++ AW++ D + + L H L
Sbjct: 39 TNSTSTRITYAILFFLSSIAAWIMLDKDVS-----KGLMKVCCYHSTLFRLVLFTQPAIK 93
Query: 76 --------GAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALT 127
G GV+R+ +F++ + L T G S R H+G W K++L +
Sbjct: 94 TTTNVVPWGELGVMRIMFSVCLFHLFLSLCTIGVSSSKDPRSSLHNGMWFIKLILLVGAM 153
Query: 128 IIPFLLPSSFI--QLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLSE-KNAERCH--- 181
+ F + +SF + I GA +F+++Q I ++ F ND + + + +C
Sbjct: 154 VGSFFISNSFFIGASWSWIGLVGAVLFMIVQFILLVDFAYSWNDSWVGKLEEGSKCAGFG 213
Query: 182 IHVMLIATV---AYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKI 238
+ ++ ATV A++I + ++M+ +YT + C L+ FFI + L L L+T S+ P +
Sbjct: 214 SYRLISATVMLMAFVITLT--VLMFHFYT-NGDCKLSNFFIGFNLALALLVTLTSMLPSV 270
Query: 239 -----NSGFLAPGLMGLYIIFLCWCAIRSEPAGETCN 270
+SG L ++ Y +L W A+ P+ TC+
Sbjct: 271 REALPSSGILQSSVVAAYATYLVWSAVSGVPS--TCH 305
>sp|Q96SA4|SERC2_HUMAN Serine incorporator 2 OS=Homo sapiens GN=SERINC2 PE=2 SV=3
Length = 455
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 17/216 (7%)
Query: 69 QGGHHC---LGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIA 125
QG C LG + V R+ F+ LL S R +G+W K ++ +
Sbjct: 83 QGHIDCGSLLGYRAVYRMCFATAAFFFFFTLLMLCVSSSRDPRAAIQNGFWFFKFLILVG 142
Query: 126 LTIIPFLLPS-SFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLSEKNAERC---- 180
LT+ F +P SF ++ G+ +F+LIQL+ +I F N L + AE C
Sbjct: 143 LTVGAFYIPDGSFTNIWFYFGVVGSFLFILIQLVLLIDFAHSWNQRWLGK--AEECDSRA 200
Query: 181 -HIHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKI- 238
+ + + Y++ I + +M+++YT C FI+ L ++ ++ PK+
Sbjct: 201 WYAGLFFFTLLFYLLSIAAVALMFMYYTEPSGCHEGKVFISLNLTFCVCVSIAAVLPKVQ 260
Query: 239 ----NSGFLAPGLMGLYIIFLCWCAIRSEPAGETCN 270
NSG L ++ LY +F+ W A+ S P + CN
Sbjct: 261 DAQPNSGLLQASVITLYTMFVTWSALSSIPE-QKCN 295
>sp|Q5XK03|SERC4_MOUSE Serine incorporator 4 OS=Mus musculus GN=Serinc4 PE=2 SV=1
Length = 492
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 76 GAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPS 135
G+ V RV G F+++ +L R H+ +WS K++ + L ++ F +P
Sbjct: 110 GSGAVYRVCAGTATFHLLQAVLLVRLHSPTNPRAQLHNSFWSLKLLFLLGLCVVAFCIPD 169
Query: 136 -SFIQLYGEIAHFGAGVFLLIQLISVISFITWLNDCCLSEKN-----AERCH--IHVMLI 187
+ I G F+L+QL+ + +F N KN A+ C + V L
Sbjct: 170 EDLFPAWHYIGICGGFTFILLQLVLITAFAQSWN------KNWQTGAAQDCSWLLGVSLA 223
Query: 188 ATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKI-----NSGF 242
Y + VG ++++ YT CLLN ++ L L++ +S+ P I NSG
Sbjct: 224 TLGFYSMAGVGAVLLFHQYTHPDGCLLNKMLLSLHLCFCGLLSLLSIAPCIRRKQPNSGL 283
Query: 243 LAPGLMGLYIIFLCWCAIRSEP 264
L ++ YI++L + A+ S P
Sbjct: 284 LQASIISCYIMYLTFSALSSRP 305
>sp|A8WCG0|SERC4_RAT Serine incorporator 4 OS=Rattus norvegicus GN=Serinc4 PE=2 SV=2
Length = 492
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 76 GAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPS 135
G+ V RV G F+++ +L R H+ +WS K++ + L F +P
Sbjct: 110 GSGAVYRVCAGTATFHLLQAVLLVRLHSPTSPRAQLHNSFWSLKLLFLLGLCTAAFCIPD 169
Query: 136 SFI-QLYGEIAHFGAGVFLLIQLISVISFI-TWLNDCCLSEKNAERCH--IHVMLIATVA 191
+ + I G F+L+QL+ + +F +W + A+ C + V+L
Sbjct: 170 EHLFPAWHYIGICGGFTFILLQLVLITAFAQSWNKN--WQTGAAQDCSWFLGVLLATLGF 227
Query: 192 YIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKI-----NSGFLAPG 246
Y + VG ++++ YT CLLN ++ L L++ +S+ P I NSG L
Sbjct: 228 YSMAGVGAVLLFHHYTHPDGCLLNKMLLSLHLCFCGLLSLLSIAPCIRLRQPNSGLLQAS 287
Query: 247 LMGLYIIFLCWCAIRSEP 264
++ YI++L + A+ S P
Sbjct: 288 IISCYIMYLTFSALSSRP 305
>sp|A6NH21|SERC4_HUMAN Serine incorporator 4 OS=Homo sapiens GN=SERINC4 PE=2 SV=1
Length = 518
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 76 GAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIALTIIPFLLPS 135
G+ V RV G F+++ +L R H+ +W K++ + L I F +P
Sbjct: 115 GSGAVYRVCAGTATFHLLQAVLLVHLHSPTSPRAQLHNSFWLLKLLFLLGLCAIAFCIPD 174
Query: 136 SFI-QLYGEIAHFGAGVFLLIQLISVISFI-TWLNDCCLSEKNAERCH-IHVMLIATVA- 191
+ + I G F+L+QL+ + +F +W + A+ C +L+AT+
Sbjct: 175 EHLFPAWHYIGICGGFAFILLQLVLITAFAHSWNKN--WQTGAAQDCSWFLAVLLATLGF 232
Query: 192 YIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKI-----NSGFLAPG 246
Y + VG ++++ +YT CLLN ++ L L++ +S+ P I SG L
Sbjct: 233 YSMAGVGAVLLFHYYTHPAGCLLNKMLLSLHLCFCGLISFLSIAPCIRLKQPRSGLLQAS 292
Query: 247 LMGLYIIFLCWCAIRSEP 264
++ YI++L + A+ S P
Sbjct: 293 VISCYIMYLTFSALSSRP 310
>sp|Q58CW5|SERC2_BOVIN Serine incorporator 2 OS=Bos taurus GN=SERINC2 PE=2 SV=1
Length = 452
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 69 QGGHHC---LGAQGVLRVSLGCFVFYIIMFLLTAGTSKLHGTRDLWHSGWWSAKIVLWIA 125
QG C LG + V R+ F+ + LL R +G+W K ++++
Sbjct: 83 QGHIDCGSLLGHRAVYRMCFAMAAFFFLFSLLMVCVRSSRDPRAAIQNGFWFFKFLIFVG 142
Query: 126 LTIIPFLLPS-SFIQLYGEIAHFGAGVFLLIQLISVISFITWLND---CCLSEKNAERCH 181
+T+ F +P SF ++ G+ +FLLIQL+ +I F N C E ++ +
Sbjct: 143 ITVGAFYIPDGSFSNIWFYFGVVGSFIFLLIQLLLLIDFAHSWNQRWLCKAEECDSRAWY 202
Query: 182 IHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTSVSLHPKI--- 238
+ + Y + I + +++++YT C FI L L ++ V++ PKI
Sbjct: 203 AGLFFFTLLFYALSITAVALLFVYYTQPGACYEGKVFIGLNLTLCVCVSIVAILPKIQDA 262
Query: 239 --NSGFLAPGLMGLYIIFLCWCAIRSEPAGETCN 270
NSG L ++ LY +F+ W A+ + P + CN
Sbjct: 263 QPNSGLLQASVITLYTMFVTWLALSNVP-DQKCN 295
>sp|P0A222|MXIG_SHISO Protein MxiG OS=Shigella sonnei GN=mxiG PE=3 SV=1
Length = 371
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 16 KEDSWFSQFRNGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKNC 68
KE + Q+ N P++ YV L+ A LL ++ ++ +S+ TE++KLKN
Sbjct: 204 KEINRIQQYINQRFPFINLYVLNLVSDKAELLVFLSKERNSSKDTELDKLKNA 256
>sp|P0A221|MXIG_SHIFL Protein MxiG OS=Shigella flexneri GN=mxiG PE=1 SV=1
Length = 371
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 16 KEDSWFSQFRNGSNPWMARYVYALIFLVANLLAWVVRDYSSAALTEMEKLKNC 68
KE + Q+ N P++ YV L+ A LL ++ ++ +S+ TE++KLKN
Sbjct: 204 KEINRIQQYINQRFPFINLYVLNLVSDKAELLVFLSKERNSSKDTELDKLKNA 256
>sp|Q96M86|DNHD1_HUMAN Dynein heavy chain domain-containing protein 1 OS=Homo sapiens
GN=DNHD1 PE=2 SV=2
Length = 4753
Score = 32.0 bits (71), Expect = 6.5, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 24/78 (30%)
Query: 114 GWWSAKIVLWIALTIIPF----LLPSSF------IQLYG--------------EIAHFGA 149
G W VLW L IPF LL SF ++L G + HFGA
Sbjct: 346 GTWHHHCVLWQQLQFIPFFKYCLLRKSFTCWKKNVRLQGLHRLQKFLENHLLLAVPHFGA 405
Query: 150 GVFLLIQLISVISFITWL 167
G+ + +L+ + ++WL
Sbjct: 406 GLLHISRLLQELHSVSWL 423
>sp|Q65U34|RNFD_MANSM Electron transport complex protein RnfD OS=Mannheimia
succiniciproducens (strain MBEL55E) GN=rnfD PE=3 SV=1
Length = 354
Score = 31.2 bits (69), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Query: 112 HSGWWSAKIVLWIALTIIPFLLPSSFIQLYGEIAHFGAGVFLLIQLISVIS 162
HSG +A+I+LW+ L +LP+ F QLY +FG GV I + V +
Sbjct: 11 HSGKLTARIMLWVILA----MLPAIFAQLY----YFGFGVLFQITIAVVFA 53
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.141 0.475
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,740,980
Number of Sequences: 539616
Number of extensions: 4314501
Number of successful extensions: 11672
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 11565
Number of HSP's gapped (non-prelim): 60
length of query: 307
length of database: 191,569,459
effective HSP length: 117
effective length of query: 190
effective length of database: 128,434,387
effective search space: 24402533530
effective search space used: 24402533530
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)