BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021797
(307 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225461677|ref|XP_002285458.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Vitis vinifera]
gi|302142895|emb|CBI20190.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/309 (86%), Positives = 294/309 (95%), Gaps = 3/309 (0%)
Query: 1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
MPGV+ARFDG+++Q MLQRWFQD++S FWD+KPK+RD ED E SY RLP+QLWNVSKYGP
Sbjct: 150 MPGVIARFDGADLQSMLQRWFQDTHSQFWDEKPKRRDQEDSEKSYGRLPYQLWNVSKYGP 209
Query: 61 CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
CADAAITG MPPPLME+QSSQRY+CAVTIG+D+VISAFRLSEDR+RSLVGAILSKVVPAT
Sbjct: 210 CADAAITGTMPPPLMELQSSQRYYCAVTIGDDAVISAFRLSEDRNRSLVGAILSKVVPAT 269
Query: 121 FSTISSLSKMIWRSEQ-SPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
FSTI+S SKMIWRSEQ SPK+SEPKPQ FARASPLTCLKDHPRKGE+LTLSPSG+LAAIT
Sbjct: 270 FSTIASFSKMIWRSEQKSPKRSEPKPQPFARASPLTCLKDHPRKGEKLTLSPSGTLAAIT 329
Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD-AATSSAYYAPVKSDYCLCLAI 238
DSLGRILLLDTQALVVVRLWKGYRDASC+F EMLV+KD AA+SS+YY PVKSDYCLCLAI
Sbjct: 330 DSLGRILLLDTQALVVVRLWKGYRDASCLFTEMLVSKDTAASSSSYYEPVKSDYCLCLAI 389
Query: 239 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQ 298
HAPRKGI+EVWQMRTGPRLLT+QC+KGSKILQPTYRFGSSM SPYVPLEVFLLNGDSGQ
Sbjct: 390 HAPRKGIVEVWQMRTGPRLLTVQCSKGSKILQPTYRFGSSMG-SPYVPLEVFLLNGDSGQ 448
Query: 299 LSVLNRSLS 307
LSVLNRSL+
Sbjct: 449 LSVLNRSLN 457
>gi|224116998|ref|XP_002331804.1| predicted protein [Populus trichocarpa]
gi|222874500|gb|EEF11631.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 250/309 (80%), Positives = 289/309 (93%), Gaps = 3/309 (0%)
Query: 1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
+PGV+ARFDG++I+ +LQ WFQ++NS+FWD+K K+RD E+L N ++RLPHQLW+V K+G
Sbjct: 47 IPGVIARFDGADIRNILQEWFQETNSHFWDEKSKRRDYEELGNGFKRLPHQLWSVDKFGL 106
Query: 61 CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
CADAAITG+MPPPLME+QSSQRY+ AVTIGED+VISA+RLSEDRSRSLVGAILSKV+PA
Sbjct: 107 CADAAITGIMPPPLMEIQSSQRYYRAVTIGEDAVISAYRLSEDRSRSLVGAILSKVMPAA 166
Query: 121 FSTISSLSKMIWRSEQSP-KKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
FSTISS+SKMIWRSE++P KK E KPQSFA+ASPLTCLKDHPRKGE+LTLSPSG+LAAIT
Sbjct: 167 FSTISSVSKMIWRSERTPTKKPEVKPQSFAKASPLTCLKDHPRKGEKLTLSPSGTLAAIT 226
Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAA-TSSAYYAPVKSDYCLCLAI 238
DSLGRILLLDTQALVVVRLWKGYRDA+C+FMEMLV+ ++A SS+++ P KSDYCLCLAI
Sbjct: 227 DSLGRILLLDTQALVVVRLWKGYRDANCLFMEMLVSMNSAGASSSHHEPSKSDYCLCLAI 286
Query: 239 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQ 298
HAPRKGIIEVWQMRTGPRLLTIQCAKGSK+LQPTYRFGSS+ SPYVPLEVFLLNGDSGQ
Sbjct: 287 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKLLQPTYRFGSSL-DSPYVPLEVFLLNGDSGQ 345
Query: 299 LSVLNRSLS 307
LSVLNRSL+
Sbjct: 346 LSVLNRSLN 354
>gi|255567076|ref|XP_002524520.1| rab3 gtpase-activating protein non-catalytic subunit, putative
[Ricinus communis]
gi|223536194|gb|EEF37847.1| rab3 gtpase-activating protein non-catalytic subunit, putative
[Ricinus communis]
Length = 484
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/301 (81%), Positives = 276/301 (91%), Gaps = 4/301 (1%)
Query: 1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
MPGV+ARFDGS++Q MLQ W Q+ +S FWD+KP RD++ L +Y+RLP+QLWNV+KYG
Sbjct: 147 MPGVIARFDGSDLQNMLQEWIQEKHSQFWDEKP-NRDADGLGITYKRLPYQLWNVNKYGS 205
Query: 61 CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
CADAAITG+MPPPLMEVQSSQRY+CAVTIG+D+VISA+RLSEDRS+SLVGAILSKVVPAT
Sbjct: 206 CADAAITGVMPPPLMEVQSSQRYYCAVTIGDDAVISAYRLSEDRSKSLVGAILSKVVPAT 265
Query: 121 FSTISSLSKMIWRSEQ-SPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
FSTI+SLSKMIWRSE+ SPKKSE KPQSFA+ASPLTCLKDHPRKGE+LTLSP G+LAAIT
Sbjct: 266 FSTIASLSKMIWRSEKASPKKSEAKPQSFAKASPLTCLKDHPRKGEKLTLSPGGTLAAIT 325
Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD-AATSSAYYAPVKSDYCLCLAI 238
DSLGRILLLDTQAL+VVRLWKGYRDASC FMEM V +D A SS+YY P KSDYCLCLAI
Sbjct: 326 DSLGRILLLDTQALIVVRLWKGYRDASCFFMEMQVKRDNAGASSSYYEPSKSDYCLCLAI 385
Query: 239 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQ 298
HAPRKGIIEVWQMRTGPRLLTIQCA+G+K+LQPTYRFGSS SPY+PLEVF+LNG+SGQ
Sbjct: 386 HAPRKGIIEVWQMRTGPRLLTIQCARGTKLLQPTYRFGSS-PDSPYIPLEVFVLNGESGQ 444
Query: 299 L 299
L
Sbjct: 445 L 445
>gi|15231948|ref|NP_188109.1| uncharacterized protein [Arabidopsis thaliana]
gi|8777474|dbj|BAA97054.1| unnamed protein product [Arabidopsis thaliana]
gi|63147384|gb|AAY34165.1| At3g14910 [Arabidopsis thaliana]
gi|115646783|gb|ABJ17116.1| At3g14910 [Arabidopsis thaliana]
gi|332642066|gb|AEE75587.1| uncharacterized protein [Arabidopsis thaliana]
Length = 455
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/309 (78%), Positives = 275/309 (88%), Gaps = 2/309 (0%)
Query: 1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
+PGV+ARFDGS IQ M+Q+W Q+ NSNFWDQK ++ D+ED + Y+RLP+Q+WNV+K G
Sbjct: 147 LPGVIARFDGSNIQSMVQKWVQEKNSNFWDQKNRKGDAEDTGSLYQRLPYQIWNVNKNGV 206
Query: 61 CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
C DA +TG+MPPPL+E+QSSQRY+CAVTIGEDSVISA+RLSEDR RSLVGAILSKVVPA
Sbjct: 207 CVDATVTGVMPPPLLELQSSQRYYCAVTIGEDSVISAYRLSEDRGRSLVGAILSKVVPAA 266
Query: 121 FSTISSLSKMIWRS-EQSPK-KSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAI 178
STI+S SK+IWRS +QSPK K E K QSFARAS LTC+KD+PRKGE+LTLSPSG+LAAI
Sbjct: 267 ASTIASFSKLIWRSNDQSPKRKPEAKTQSFARASSLTCIKDYPRKGEKLTLSPSGTLAAI 326
Query: 179 TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI 238
TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML KD S + PVKSDYCLCLAI
Sbjct: 327 TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLAKKDKGKSVIHTEPVKSDYCLCLAI 386
Query: 239 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQ 298
HAPRKGIIEVWQMRTGPRLLTIQCAKGSK+LQP YRFGS+ +SSPY+PLEVFLLNGDSGQ
Sbjct: 387 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKLLQPAYRFGSNSSSSPYIPLEVFLLNGDSGQ 446
Query: 299 LSVLNRSLS 307
+S+LNRSLS
Sbjct: 447 VSMLNRSLS 455
>gi|356543215|ref|XP_003540058.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Glycine max]
Length = 459
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/309 (80%), Positives = 282/309 (91%), Gaps = 4/309 (1%)
Query: 1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
M GV+A FDGS+IQ MLQ+WF++S+S FWDQ PK DSED N+ ++P+QLWN+ KYG
Sbjct: 150 MSGVIAHFDGSDIQNMLQKWFEESHSRFWDQNPKSHDSEDFGNTDVKIPYQLWNIGKYGT 209
Query: 61 CADAAITGLMPPPLMEVQ-SSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPA 119
CA+AAITG+MPPPLME Q SSQRY+CAV +GED+VISA+RLSE++ RSLVGAILSKVVPA
Sbjct: 210 CAEAAITGIMPPPLMEQQQSSQRYYCAVAVGEDAVISAYRLSENKGRSLVGAILSKVVPA 269
Query: 120 TFSTISSLSKMIWRSEQS-PKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAI 178
TFSTISS SK+IWRSEQS PKKS+ KPQ FARASPLTCLKDHPRKGE+LTLSPSG+LAAI
Sbjct: 270 TFSTISSFSKLIWRSEQSSPKKSDQKPQPFARASPLTCLKDHPRKGEKLTLSPSGTLAAI 329
Query: 179 TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD-AATSSAYYAPVKSDYCLCLA 237
TDSLGRILLLDTQALVVVRLWKGYRDASC+FMEMLVNKD A++SS+Y P+KSDYCLCLA
Sbjct: 330 TDSLGRILLLDTQALVVVRLWKGYRDASCLFMEMLVNKDIASSSSSYSEPLKSDYCLCLA 389
Query: 238 IHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSG 297
IHAPRKGIIE+WQMRTGPRL TI CAKGSK+LQP+YRFG+SM SSPYVPLEVFLLNGDSG
Sbjct: 390 IHAPRKGIIEIWQMRTGPRLRTISCAKGSKMLQPSYRFGASM-SSPYVPLEVFLLNGDSG 448
Query: 298 QLSVLNRSL 306
Q+SVLNR+L
Sbjct: 449 QISVLNRTL 457
>gi|297830038|ref|XP_002882901.1| hypothetical protein ARALYDRAFT_478912 [Arabidopsis lyrata subsp.
lyrata]
gi|297328741|gb|EFH59160.1| hypothetical protein ARALYDRAFT_478912 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/309 (77%), Positives = 274/309 (88%), Gaps = 2/309 (0%)
Query: 1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
+PG++ARFDGS IQ MLQ+WFQ+ NSNFWDQK ++ D ED + Y+RLP+Q+WNV+K G
Sbjct: 147 LPGIIARFDGSNIQSMLQKWFQEKNSNFWDQKNRKGDVEDSGSLYQRLPYQIWNVNKNGV 206
Query: 61 CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
C DA +TG+MPPPL+E+QSSQRY+CAVTIGED+VISA+RLSEDR RSLVGAILSKVVPA
Sbjct: 207 CVDATVTGVMPPPLLELQSSQRYYCAVTIGEDAVISAYRLSEDRGRSLVGAILSKVVPAA 266
Query: 121 FSTISSLSKMIWRS-EQSPK-KSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAI 178
STI+S SK+IWRS +QSPK K E K QSFARAS LTC+KD+PRKGE+LTLSPSG+LAAI
Sbjct: 267 ASTIASFSKLIWRSNDQSPKRKPEAKTQSFARASSLTCIKDYPRKGEKLTLSPSGTLAAI 326
Query: 179 TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI 238
TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML KD S + PVKSDYCLCLAI
Sbjct: 327 TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLAKKDKGKSVIHTEPVKSDYCLCLAI 386
Query: 239 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQ 298
HAPRKGIIEVWQMRTGPRLLTIQCA GSK+LQP YRFGS+ +SSPY+PLEVFLLNGDSGQ
Sbjct: 387 HAPRKGIIEVWQMRTGPRLLTIQCANGSKLLQPAYRFGSNSSSSPYIPLEVFLLNGDSGQ 446
Query: 299 LSVLNRSLS 307
+S+LNRSLS
Sbjct: 447 VSMLNRSLS 455
>gi|449456579|ref|XP_004146026.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Cucumis sativus]
Length = 456
Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust.
Identities = 240/310 (77%), Positives = 277/310 (89%), Gaps = 5/310 (1%)
Query: 1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
MPGV+AR +GS+IQ LQ+WFQ+S+S FWD K QRD D ENS E+L +Q+WNVSKYG
Sbjct: 148 MPGVIARIEGSDIQNTLQKWFQESSSQFWDPKSHQRDMNDSENSVEKLAYQVWNVSKYGA 207
Query: 61 CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
CADAAITG+MPPPLME+QSS+RYFCAVT+GED+VISAFRLSED+SRSLVGAILSKVVPAT
Sbjct: 208 CADAAITGVMPPPLMELQSSERYFCAVTVGEDAVISAFRLSEDKSRSLVGAILSKVVPAT 267
Query: 121 FSTISSLSKMIWRSE-QSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
FSTI+S SKMIWRSE ++ KK + K Q+FARASPLTCLKDHPRKGE+LTLSPSG+LAAIT
Sbjct: 268 FSTIASFSKMIWRSEPKTSKKPDAKGQAFARASPLTCLKDHPRKGEKLTLSPSGTLAAIT 327
Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAY---YAPVKSDYCLCL 236
DSLGRILLLDTQALVVVRLWKGYRDA+C+FMEMLVN+D A+SS+ Y P K+DYCLCL
Sbjct: 328 DSLGRILLLDTQALVVVRLWKGYRDANCLFMEMLVNRDTASSSSNSMDYEPAKNDYCLCL 387
Query: 237 AIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDS 296
AIHAPRKGI+E+WQMRTG RL TI+C KGSK+LQP++R GSSM SPYVPLEVFLLNGDS
Sbjct: 388 AIHAPRKGIVEIWQMRTGRRLRTIRCTKGSKLLQPSFRLGSSM-DSPYVPLEVFLLNGDS 446
Query: 297 GQLSVLNRSL 306
GQ+ V+NR+L
Sbjct: 447 GQICVINRTL 456
>gi|449516756|ref|XP_004165412.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Cucumis sativus]
Length = 456
Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust.
Identities = 240/310 (77%), Positives = 277/310 (89%), Gaps = 5/310 (1%)
Query: 1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
MPGV+AR +GS+IQ LQ+WFQ+S+S FWD K QRD D ENS E+L +Q+WNVSKYG
Sbjct: 148 MPGVIARIEGSDIQNTLQKWFQESSSQFWDPKSHQRDMNDSENSVEKLAYQVWNVSKYGA 207
Query: 61 CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
CADAAITG+MPPPLME+QSS+RYFCAVT+GED+VISAFRLSED+SRSLVGAILSKVVPAT
Sbjct: 208 CADAAITGVMPPPLMELQSSERYFCAVTVGEDAVISAFRLSEDKSRSLVGAILSKVVPAT 267
Query: 121 FSTISSLSKMIWRSE-QSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
FSTI+S SKMIWRSE ++ KK + K Q+FARASPLTCLKDHPRKGE+LTLSPSG+LAAIT
Sbjct: 268 FSTIASFSKMIWRSEPKTSKKPDAKGQAFARASPLTCLKDHPRKGEKLTLSPSGTLAAIT 327
Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAY---YAPVKSDYCLCL 236
DSLGRILLLDTQALVVVRLWKGYRDA+C+FMEMLVN+D A+SS+ Y P K+DYCLCL
Sbjct: 328 DSLGRILLLDTQALVVVRLWKGYRDANCLFMEMLVNRDTASSSSNSMDYEPAKNDYCLCL 387
Query: 237 AIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDS 296
AIHAPRKGI+E+WQMRTG RL TI+C KGSK+LQP++R GSSM SPYVPLEVFLLNGDS
Sbjct: 388 AIHAPRKGIVEIWQMRTGRRLRTIRCTKGSKLLQPSFRLGSSM-DSPYVPLEVFLLNGDS 446
Query: 297 GQLSVLNRSL 306
GQ+ V+NR+L
Sbjct: 447 GQICVINRTL 456
>gi|356514563|ref|XP_003525975.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Glycine max]
Length = 460
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/309 (78%), Positives = 282/309 (91%), Gaps = 4/309 (1%)
Query: 1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
M GV+ARFDGS+IQ MLQ+WF+++NS F DQ PK +DSED EN+ ++P+QLWN+ KYG
Sbjct: 151 MSGVIARFDGSDIQNMLQKWFEEANSRFSDQNPKSQDSEDFENTDVKIPYQLWNIGKYGT 210
Query: 61 CADAAITGLMPPPLMEVQ-SSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPA 119
CADAAITG+MPPPLME Q S+QRY+CAV +GED+VISA+RLSE++ RSLVGAILSKVVPA
Sbjct: 211 CADAAITGIMPPPLMEQQQSNQRYYCAVAVGEDAVISAYRLSENKGRSLVGAILSKVVPA 270
Query: 120 TFSTISSLSKMIWRSEQS-PKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAI 178
TFSTISS SK+IWR+E+S PKKS+ KP+ FARASPLTCLKDHPRKGE+LTLSPSG+LAAI
Sbjct: 271 TFSTISSFSKLIWRNERSSPKKSDLKPRPFARASPLTCLKDHPRKGEKLTLSPSGTLAAI 330
Query: 179 TDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD-AATSSAYYAPVKSDYCLCLA 237
TDSLGRILLLDTQALVVVRLWKGYRDASC+FMEMLVNKD A++SS+Y P+KSDYCLCLA
Sbjct: 331 TDSLGRILLLDTQALVVVRLWKGYRDASCLFMEMLVNKDIASSSSSYSEPLKSDYCLCLA 390
Query: 238 IHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSG 297
IHAPRKGIIE+WQMRTG RL TI C KGSK+LQP+YRFG+S+ SSPYVPLEVFLLNGDSG
Sbjct: 391 IHAPRKGIIEIWQMRTGQRLRTISCTKGSKMLQPSYRFGASV-SSPYVPLEVFLLNGDSG 449
Query: 298 QLSVLNRSL 306
Q+SVLNR+L
Sbjct: 450 QISVLNRTL 458
>gi|115478506|ref|NP_001062848.1| Os09g0315800 [Oryza sativa Japonica Group]
gi|51091645|dbj|BAD36414.1| rab3-GAP regulatory domain-like [Oryza sativa Japonica Group]
gi|113631081|dbj|BAF24762.1| Os09g0315800 [Oryza sativa Japonica Group]
gi|218201904|gb|EEC84331.1| hypothetical protein OsI_30840 [Oryza sativa Indica Group]
gi|222641308|gb|EEE69440.1| hypothetical protein OsJ_28835 [Oryza sativa Japonica Group]
Length = 469
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/307 (72%), Positives = 263/307 (85%), Gaps = 2/307 (0%)
Query: 1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
PGV+ARFDG+++Q MLQ+ + S+ W K +Q D+E+ ++S+ R+P Q+WNVSK+
Sbjct: 163 FPGVIARFDGADLQNMLQKSLHEVKSHLWKDKSEQEDAEE-DSSFGRIPFQIWNVSKFSS 221
Query: 61 CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
CADAAI GLMPPPL+E+QSSQR++CA+T+GED+V+SA+RLSEDRSRS+VGAILS+ V AT
Sbjct: 222 CADAAIVGLMPPPLLELQSSQRHYCAITVGEDAVVSAYRLSEDRSRSIVGAILSRGVAAT 281
Query: 121 FSTISSLSKMIWRSEQSP-KKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
FSTISSLSK+IWRSE SP KKS PKPQSFA+ SPLTCLKD PRKGERLTLSPSG+LAAIT
Sbjct: 282 FSTISSLSKIIWRSEPSPTKKSRPKPQSFAKTSPLTCLKDSPRKGERLTLSPSGTLAAIT 341
Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH 239
DSLGRILLLDT ALV VRLWKGYRDASC+F+EML+NKD A+SS + KSDYCLCLAIH
Sbjct: 342 DSLGRILLLDTHALVAVRLWKGYRDASCLFVEMLLNKDKASSSLHTEYTKSDYCLCLAIH 401
Query: 240 APRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQL 299
APRKGIIE+WQMRTG RLLTI C KGS+ILQP+ RF SS SS Y PLEV+L NGDSGQL
Sbjct: 402 APRKGIIEIWQMRTGARLLTIPCPKGSRILQPSTRFMSSPFSSLYSPLEVYLFNGDSGQL 461
Query: 300 SVLNRSL 306
SVLNR +
Sbjct: 462 SVLNRHI 468
>gi|414885002|tpg|DAA61016.1| TPA: hypothetical protein ZEAMMB73_415761 [Zea mays]
Length = 468
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/308 (70%), Positives = 262/308 (85%), Gaps = 3/308 (0%)
Query: 1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
PGV+ARFDG+++Q +L++ FQD S W K +++D+ED E ++ R+P Q+WNV+K+
Sbjct: 161 FPGVIARFDGADLQNVLKKAFQDVKSRLWKDKFEEQDAED-EETFGRIPFQIWNVNKFSS 219
Query: 61 CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
CADAAI GLMPPPL+E+QSSQR++CA+T+GED+V+SA+RLSEDR+RS+VGAILS+ V AT
Sbjct: 220 CADAAIVGLMPPPLLELQSSQRHYCAITVGEDAVVSAYRLSEDRTRSIVGAILSRGVAAT 279
Query: 121 FSTISSLSKMIWRSEQS-PKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
FSTISSLSK++WRSE S PKKS PKPQSFA+ SPLTCLKD PRKGERLTLSPSG+LAAIT
Sbjct: 280 FSTISSLSKILWRSEPSPPKKSRPKPQSFAKTSPLTCLKDSPRKGERLTLSPSGTLAAIT 339
Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATS-SAYYAPVKSDYCLCLAI 238
DSLGRILLLDT ALV VRLWKGYRDASC+F+EML+NKD A+S S + KSDYCLCLAI
Sbjct: 340 DSLGRILLLDTHALVAVRLWKGYRDASCLFVEMLLNKDKASSGSMHIEYTKSDYCLCLAI 399
Query: 239 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQ 298
HAPRKGIIEVW+MRTG RLLTI C KGS+ILQP+ R +S S Y PLEV+L NGDSGQ
Sbjct: 400 HAPRKGIIEVWKMRTGSRLLTIPCPKGSRILQPSARLSTSSFSPSYSPLEVYLFNGDSGQ 459
Query: 299 LSVLNRSL 306
LSVLNR +
Sbjct: 460 LSVLNRHI 467
>gi|242048872|ref|XP_002462180.1| hypothetical protein SORBIDRAFT_02g021130 [Sorghum bicolor]
gi|241925557|gb|EER98701.1| hypothetical protein SORBIDRAFT_02g021130 [Sorghum bicolor]
Length = 468
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/308 (70%), Positives = 261/308 (84%), Gaps = 3/308 (0%)
Query: 1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
PGV+ARFDG+++Q +L++ FQD S W K +++D+ED E ++ R+P Q+WNVSK+
Sbjct: 161 FPGVIARFDGADLQSILKKTFQDVKSRLWKDKFEEQDAED-EETFGRIPFQIWNVSKFSS 219
Query: 61 CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
CADAAI GLMPPPL+E+QSSQR++CA+T+GED+V+SA+RLSEDRSRS+VGAILS+ V AT
Sbjct: 220 CADAAIVGLMPPPLLELQSSQRHYCAITVGEDAVVSAYRLSEDRSRSIVGAILSRGVAAT 279
Query: 121 FSTISSLSKMIWRSEQS-PKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
FSTISSLS+++WRSE S PKKS PKPQSFA+ SPLTCLKD PRKGERLTLSPSG+LAAIT
Sbjct: 280 FSTISSLSRILWRSEPSPPKKSRPKPQSFAKTSPLTCLKDSPRKGERLTLSPSGTLAAIT 339
Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAA-TSSAYYAPVKSDYCLCLAI 238
DSLGRILLLDTQALV VRLWKGYRDASC+F+EML+NKD A S + KSDYCLCLAI
Sbjct: 340 DSLGRILLLDTQALVAVRLWKGYRDASCLFVEMLLNKDKALLRSMHIEYTKSDYCLCLAI 399
Query: 239 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQ 298
HAPRKGIIEVW+MRTG R+LTI C KGS+ILQP+ R + SS Y PLEV+L NGDSGQ
Sbjct: 400 HAPRKGIIEVWKMRTGSRVLTIPCPKGSRILQPSARLSTQSFSSSYSPLEVYLFNGDSGQ 459
Query: 299 LSVLNRSL 306
LSVLNR +
Sbjct: 460 LSVLNRHI 467
>gi|357157989|ref|XP_003577981.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Brachypodium distachyon]
Length = 464
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/309 (71%), Positives = 261/309 (84%), Gaps = 4/309 (1%)
Query: 1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
PGV+A DG ++Q MLQ+ F++ S W K + D++D E+S+ R+P ++WNVSK+G
Sbjct: 158 FPGVIAHCDGDDLQTMLQKSFEEVKSRMWKDKFEHEDADD-ESSFGRIPIRIWNVSKFGS 216
Query: 61 CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
CADAAI GLMPPPL+E+QSSQR++CA+T+GED+V+SA+RLSEDRSRSLVGAILS+ V AT
Sbjct: 217 CADAAIVGLMPPPLLELQSSQRHYCAITVGEDAVVSAYRLSEDRSRSLVGAILSRGVAAT 276
Query: 121 FSTISSLSKMIWRSEQSP-KKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
FSTISSLSK++WRSE SP KKS PKPQSFA+ SPLTCLKD PRKGERLTLSPSG+LAAIT
Sbjct: 277 FSTISSLSKILWRSEPSPTKKSRPKPQSFAKTSPLTCLKDTPRKGERLTLSPSGTLAAIT 336
Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYY-APVKSDYCLCLAI 238
DSLGRILLLDT+ALV VRLWKGYRDASC+F+EML+NKD +SS+ + K DYCLCLAI
Sbjct: 337 DSLGRILLLDTRALVAVRLWKGYRDASCLFVEMLLNKDKESSSSMHLEHTKGDYCLCLAI 396
Query: 239 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQ 298
HAPRKGIIEVWQMRTGPRLLTI C KGS+ILQP+ RF SS S Y PLEV+L NGDSGQ
Sbjct: 397 HAPRKGIIEVWQMRTGPRLLTIPCPKGSRILQPSTRF-SSSQFSSYSPLEVYLFNGDSGQ 455
Query: 299 LSVLNRSLS 307
LSVLNR +
Sbjct: 456 LSVLNRHIG 464
>gi|294462996|gb|ADE77036.1| unknown [Picea sitchensis]
Length = 343
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 243/306 (79%), Gaps = 3/306 (0%)
Query: 1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
P + R D S++Q +L+R ++ + + ++D++ L++ Y +L +QLWNVSK GP
Sbjct: 32 FPAAILRIDASDLQSLLKRCLEERSYDARFPISAKKDTQGLDDVYGKLKYQLWNVSKCGP 91
Query: 61 CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
C+DAAITG+M PPLME QS Q+Y+CA+T+G ++ +AFRLSED++RSLVGAILSKV+PAT
Sbjct: 92 CSDAAITGIMAPPLMEDQSRQQYYCAITVGSNATFAAFRLSEDKNRSLVGAILSKVMPAT 151
Query: 121 FSTISSLSKMIWRSEQSPKK-SEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
STISSL+KM WR++QS + +E KPQ+FARAS LTCLKD PRKGERL+LSPSG LAA+T
Sbjct: 152 VSTISSLAKMFWRNDQSEARPAEVKPQAFARASLLTCLKDDPRKGERLSLSPSGCLAAVT 211
Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAY-YAPVKSDYCLCLAI 238
DSLGRILL+DTQALVVVRLWKGYRDASC F+E+ +N + + Y K D+CLCLAI
Sbjct: 212 DSLGRILLIDTQALVVVRLWKGYRDASCFFLEVPLNGEMPSVDGIGYGKSKHDFCLCLAI 271
Query: 239 HAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGS-SMASSPYVPLEVFLLNGDSG 297
HAPR+G++EVW+MRTGPR++ ++CAKG ++LQ + +F S S + Y+P +V+LLNGDSG
Sbjct: 272 HAPRRGVVEVWKMRTGPRIMMLKCAKGCQLLQSSCKFTSLSSDTYDYIPAQVYLLNGDSG 331
Query: 298 QLSVLN 303
Q+++LN
Sbjct: 332 QIAILN 337
>gi|226507944|ref|NP_001140784.1| uncharacterized protein LOC100272859 [Zea mays]
gi|194701060|gb|ACF84614.1| unknown [Zea mays]
gi|414885001|tpg|DAA61015.1| TPA: hypothetical protein ZEAMMB73_415761 [Zea mays]
Length = 240
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 183/239 (76%), Positives = 210/239 (87%), Gaps = 2/239 (0%)
Query: 70 MPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSK 129
MPPPL+E+QSSQR++CA+T+GED+V+SA+RLSEDR+RS+VGAILS+ V ATFSTISSLSK
Sbjct: 1 MPPPLLELQSSQRHYCAITVGEDAVVSAYRLSEDRTRSIVGAILSRGVAATFSTISSLSK 60
Query: 130 MIWRSEQSP-KKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLL 188
++WRSE SP KKS PKPQSFA+ SPLTCLKD PRKGERLTLSPSG+LAAITDSLGRILLL
Sbjct: 61 ILWRSEPSPPKKSRPKPQSFAKTSPLTCLKDSPRKGERLTLSPSGTLAAITDSLGRILLL 120
Query: 189 DTQALVVVRLWKGYRDASCVFMEMLVNKDAATS-SAYYAPVKSDYCLCLAIHAPRKGIIE 247
DT ALV VRLWKGYRDASC+F+EML+NKD A+S S + KSDYCLCLAIHAPRKGIIE
Sbjct: 121 DTHALVAVRLWKGYRDASCLFVEMLLNKDKASSGSMHIEYTKSDYCLCLAIHAPRKGIIE 180
Query: 248 VWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQLSVLNRSL 306
VW+MRTG RLLTI C KGS+ILQP+ R +S S Y PLEV+L NGDSGQLSVLNR +
Sbjct: 181 VWKMRTGSRLLTIPCPKGSRILQPSARLSTSSFSPSYSPLEVYLFNGDSGQLSVLNRHI 239
>gi|326492111|dbj|BAJ98280.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 358
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/201 (71%), Positives = 172/201 (85%), Gaps = 2/201 (0%)
Query: 1 MPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP 60
PGV+AR DG+++Q MLQ+ FQ+ S W K +Q D ED +S+E+ P Q+WNVSK+G
Sbjct: 158 FPGVIARCDGADLQIMLQKSFQEVKSRMWKDKFEQEDDED-TSSFEKTPLQIWNVSKFGS 216
Query: 61 CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPAT 120
C DAAI GLMPPPL+E+QSSQR++CA+T+GED+V+SA+RLSEDRSRSLVGAILS+ V AT
Sbjct: 217 CVDAAIVGLMPPPLLELQSSQRHYCAITVGEDAVVSAYRLSEDRSRSLVGAILSRGVAAT 276
Query: 121 FSTISSLSKMIWRSEQSP-KKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
FSTISSLSK++WRSE SP KK PKPQ+FA+ SPLTCLKD PRKGERLTLSPSG+LAAIT
Sbjct: 277 FSTISSLSKILWRSEPSPTKKPRPKPQAFAKTSPLTCLKDSPRKGERLTLSPSGTLAAIT 336
Query: 180 DSLGRILLLDTQALVVVRLWK 200
DSLGRILLLDT+ALV VRLWK
Sbjct: 337 DSLGRILLLDTRALVAVRLWK 357
>gi|302753388|ref|XP_002960118.1| hypothetical protein SELMODRAFT_402130 [Selaginella moellendorffii]
gi|300171057|gb|EFJ37657.1| hypothetical protein SELMODRAFT_402130 [Selaginella moellendorffii]
Length = 459
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 151/308 (49%), Positives = 198/308 (64%), Gaps = 16/308 (5%)
Query: 5 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP--CA 62
+AR D ++Q L+R + N + + + +L +Q+W+V G C
Sbjct: 154 IARIDALDLQSQLRRRLLEVARN------STLERQLIAAESTKLSYQVWSVKSSGSSICV 207
Query: 63 DAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFS 122
DAAITG++PP L E QS +RYFCAVTIG DS ++AFRLSEDR +SL + +KVVPAT S
Sbjct: 208 DAAITGVLPPALFEQQSRERYFCAVTIGSDSTLAAFRLSEDRRKSLTELLFNKVVPATVS 267
Query: 123 TISSLSKMIWRSE---QSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
I+S +K R+ Q + +E K Q F+RAS +T LKD PRKGE L LSP+ SLAA+T
Sbjct: 268 RITSFAKAFRRNSEPVQEARPAEVKAQEFSRASLITALKDSPRKGESLALSPTCSLAAVT 327
Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH 239
DSLGR+LL+D ALVVVRLWKGYRDA C F+E +N + + VK D+ LCLAIH
Sbjct: 328 DSLGRVLLVDVHALVVVRLWKGYRDAHCKFLEAPLNGSSGLQH-RSSCVKEDFSLCLAIH 386
Query: 240 APRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSS----MASSPYVPLEVFLLNGD 295
APR+ ++EVWQ+R GPRL I C++ ++LQP +F SS Y P VFLL GD
Sbjct: 387 APRRAVVEVWQLRNGPRLSVIHCSESCRLLQPPSQFWSSDRNDHEEESYSPKLVFLLKGD 446
Query: 296 SGQLSVLN 303
SG LS++N
Sbjct: 447 SGLLSLIN 454
>gi|302804542|ref|XP_002984023.1| hypothetical protein SELMODRAFT_119185 [Selaginella moellendorffii]
gi|300148375|gb|EFJ15035.1| hypothetical protein SELMODRAFT_119185 [Selaginella moellendorffii]
Length = 459
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 151/308 (49%), Positives = 198/308 (64%), Gaps = 16/308 (5%)
Query: 5 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGP--CA 62
+AR D ++Q L+R + N + + + +L +Q+W+V G C
Sbjct: 154 IARIDALDLQSQLRRRLLEVARN------STLERQLIAAESTKLSYQVWSVKSSGSSICV 207
Query: 63 DAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFS 122
DAAITG++PP L E QS +RYFCAVTIG DS ++AFRLSEDR +SL + +KVVPAT S
Sbjct: 208 DAAITGVLPPALFEQQSRERYFCAVTIGSDSTLAAFRLSEDRRKSLTELLFNKVVPATVS 267
Query: 123 TISSLSKMIWRSE---QSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT 179
I+S +K R+ Q + +E K Q F+RAS +T LKD PRKGE L LSP+ SLAA+T
Sbjct: 268 RITSFAKAFRRNSEPVQEARPAEVKAQEFSRASLITALKDSPRKGESLALSPTCSLAAVT 327
Query: 180 DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH 239
DSLGR+LL+D ALVVVRLWKGYRDA C F+E +N + + VK D+ LCLAIH
Sbjct: 328 DSLGRVLLVDVHALVVVRLWKGYRDAHCKFLEAPLNGSSGLQH-RSSCVKEDFSLCLAIH 386
Query: 240 APRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSS----MASSPYVPLEVFLLNGD 295
APR+ ++EVWQ+R GPRL I C++ ++LQP +F SS Y P VFLL GD
Sbjct: 387 APRRAVVEVWQLRNGPRLSVIHCSESCRLLQPPSQFWSSDRNDHEEESYSPKLVFLLKGD 446
Query: 296 SGQLSVLN 303
SG LS++N
Sbjct: 447 SGLLSLIN 454
>gi|168021568|ref|XP_001763313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685448|gb|EDQ71843.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 480
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 202/320 (63%), Gaps = 20/320 (6%)
Query: 2 PGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYG-- 59
P +AR D +++ L + + K D++D E RLP +WN+++
Sbjct: 153 PKAIARIDAIDLKVGLPKRLRMEGEGLLGWKVGG-DTQDGEAPINRLPFLMWNINRTAGA 211
Query: 60 -PCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVP 118
C+D A+ G+MPPPL+E+Q +R++CA+T+G D ++AFR+S ++ SLV AI+ KV+P
Sbjct: 212 LACSDGALAGIMPPPLLELQG-KRHYCALTVGPDCTLAAFRVSGEKQGSLVSAIIDKVMP 270
Query: 119 ATFSTISSLSKMIWRSEQSPKKSEP---KPQSFARASPLTCLKDHPRKGERLTLSPSGSL 175
A+ + IS+L+K W+ ++S + + P PQ+F+RAS +T LKD+ RKGERL ++P GSL
Sbjct: 271 ASVTKISNLAKRFWQKDESSESNRPLEVSPQTFSRASVITSLKDNMRKGERLAVAPGGSL 330
Query: 176 AAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSS---AYYAPVKSDY 232
AAI DSLGR+LL+D A+VVVRLWKGYRDA C+F+E V+ A + + + + Y
Sbjct: 331 AAIADSLGRVLLVDVNAVVVVRLWKGYRDAHCLFLEAPVDGSADYADPQKKHLSLRRQQY 390
Query: 233 CLCLAIHAPRKGIIEV-WQMRTGPRLLTIQCAKGSKILQPTYRFGSSM--------ASSP 283
LCLAIHAPR+G+IEV WQMR G R+ I+ + ++LQP + S
Sbjct: 391 RLCLAIHAPRRGVIEVIWQMRHGGRVAVIRDGESCRLLQPACQLRSVALELDTKDDEDET 450
Query: 284 YVPLEVFLLNGDSGQLSVLN 303
+ P V+ L+GDSG LS++N
Sbjct: 451 FEPARVYFLHGDSGSLSLIN 470
>gi|187607123|ref|NP_001120595.1| rab3 GTPase-activating protein, non-catalytic subunit [Xenopus
(Silurana) tropicalis]
gi|171846396|gb|AAI61630.1| LOC100145752 protein [Xenopus (Silurana) tropicalis]
Length = 1408
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 123/234 (52%), Gaps = 19/234 (8%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSE 142
+T+G + F E ++ L+ A+ SK+ A FS S + W+S+ + +
Sbjct: 327 ITVGSNPFTGFFFALEGSTQPLLSHVALAVASKLTSALFSAASGW--LGWKSKHEEEPQQ 384
Query: 143 PKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLW 199
+ A+PL L D R GER++LSP +LAA+TD GR++LLD + +R+W
Sbjct: 385 KQKPKVEPANPLAVRFGLPDSRRHGERVSLSPCNTLAAVTDDFGRVILLDVGRGIAIRMW 444
Query: 200 KGYRDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRT 253
KGYRDA +M+++ + + + +++P + S L I+APR+GI+EVW +
Sbjct: 445 KGYRDAQVGWMQIVEDLHERESERGHHSPFQNVKGPSRVAQFLVIYAPRRGILEVWSTQQ 504
Query: 254 GPRLLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
GPR+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 505 GPRVGAFNVGKHCRLLYPGYKIMGLNNVTSQGWQPQTYQICLIDPVSGNVRTVN 558
>gi|326915108|ref|XP_003203863.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Meleagris gallopavo]
Length = 1499
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 30/256 (11%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ + A VT+G +
Sbjct: 366 LAYKKWGLQDVDTIVDHASVGIMTLSPFDQMKTASNIGGYNAAIKNSPPAMSQYVTVGSN 425
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSF 148
F E S+ L+ A+ SK+ A F S + W+S+ + + +
Sbjct: 426 PFTGFFFALEGSSQPLLSHVALAVASKLTSALFHAASGW--LGWKSKHEEEPVQKQKPKV 483
Query: 149 ARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA 205
A+PL + D R GE++ LSP +LAA+TD GR++LLD + +R+WKGYRDA
Sbjct: 484 EPATPLAVRFGIPDSRRHGEKICLSPCNTLAAVTDDFGRVILLDVTRGLAIRMWKGYRDA 543
Query: 206 SCVFMEMLVN-KDAATSSAYYAPVKSDYC-----LCLAIHAPRKGIIEVWQMRTGPRLLT 259
+++ + + + T Y+P + +C L I+APR+GI+EVW + GPR+
Sbjct: 544 EVGWIQTVEDLHERETEKIDYSPFGNAHCPSRVAQFLVIYAPRRGILEVWSTQQGPRVGA 603
Query: 260 IQCAKGSKILQPTYRF 275
K ++L P Y+
Sbjct: 604 FNVGKHCRLLYPGYKI 619
>gi|443709560|gb|ELU04193.1| hypothetical protein CAPTEDRAFT_19824 [Capitella teleta]
Length = 1405
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 111/196 (56%), Gaps = 16/196 (8%)
Query: 111 AILSKVVPATFSTISSLSKMIWR-----SEQSPKKSEPKPQSFARASPLTC-LKDHPRKG 164
A+ SK+ A FS IS+ S + +E + ++ +PK + A A PL L D R+G
Sbjct: 320 AVASKLKSALFSQISAASGWLGLGGTSGAESTQREKKPKIEP-ATALPLRFGLYDKRRQG 378
Query: 165 ERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAY 224
E+L LSP+G L A TDS GR++L+D V VR+WKGYRDA F+ M +D T A
Sbjct: 379 EKLCLSPNGLLLATTDSFGRVILVDVTRGVAVRMWKGYRDAQLAFVAM--TEDQLTERAS 436
Query: 225 YA-PVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRF-GSSMASS 282
+ P++ L L I+APR+GI+EVW + GPR+ +K S++L P Y G + +
Sbjct: 437 RSQPLRR--ALFLVIYAPRRGILEVWTAQQGPRVAAFNVSKWSQLLCPGYGLMGLNNVTY 494
Query: 283 PYVPLE---VFLLNGD 295
V + VFLL+ D
Sbjct: 495 REVRVHLHPVFLLDSD 510
>gi|449270247|gb|EMC80943.1| Rab3 GTPase-activating protein non-catalytic subunit [Columba
livia]
Length = 1382
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 30/256 (11%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ + A VT+G +
Sbjct: 249 LAYKKWGLQDVDTIVDHASIGIMTLSPFDQMKTASNIGGYNAAIKNNPPAMSQYVTVGSN 308
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSF 148
F E S+ L+ A+ SK+ A F+ S + W+S+ + ++ +
Sbjct: 309 PFTGFFFALEGSSQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEPAQKQKPKV 366
Query: 149 ARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA 205
A+PL L D R GER+ LSP +LAA+TD+ GR++LLD + VR+WKGYRDA
Sbjct: 367 EPATPLAVRFGLPDSRRHGERICLSPCNTLAAVTDAFGRVILLDVTRGLAVRMWKGYRDA 426
Query: 206 SCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPRLLT 259
+++ + + + T ++P S L I+APR+GI+EVW + GPR+
Sbjct: 427 EVGWIQTVEDLHERETEKMDFSPFGNAQGPSRVAQFLVIYAPRRGILEVWSTQQGPRVGA 486
Query: 260 IQCAKGSKILQPTYRF 275
K ++L P Y+
Sbjct: 487 FNVGKYCRLLYPGYKI 502
>gi|255003799|ref|NP_001157272.1| rab3 GTPase-activating protein non-catalytic subunit [Gallus
gallus]
Length = 1382
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 120/256 (46%), Gaps = 30/256 (11%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ + A VT+G +
Sbjct: 249 LAYKKWGLQDVDTIVDHASVGIMTLSPFDQMKTASNIGGYNAAIKNSPPAMSQYVTVGSN 308
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSF 148
F E S+ L+ A+ SK+ A F S + W+S+ + + +
Sbjct: 309 PFTGFFFALEGSSQPLLSHVALAVASKLTSALFHAASGW--LGWKSKHEEEPVQKQKPKV 366
Query: 149 ARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA 205
A+PL + D R GE++ LSP +LAA+TD GR++LLD + +R+WKGYRDA
Sbjct: 367 EPATPLAVRFGIPDSRRHGEKICLSPCNTLAAVTDDFGRVILLDVTRGLAIRMWKGYRDA 426
Query: 206 SCVFMEMLVN-KDAATSSAYYAPVKSDYC-----LCLAIHAPRKGIIEVWQMRTGPRLLT 259
+++ + + + T Y+P + C L I+APR+GI+EVW + GPR+
Sbjct: 427 EVGWIQTVEDLHERETEKIDYSPFGNAQCPSRVAQFLVIYAPRRGILEVWSTQQGPRVGA 486
Query: 260 IQCAKGSKILQPTYRF 275
K ++L P Y+
Sbjct: 487 FNVGKHCRLLYPGYKI 502
>gi|327262452|ref|XP_003216038.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like isoform 1 [Anolis carolinensis]
Length = 1380
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 120/256 (46%), Gaps = 30/256 (11%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D G+M P M+ S+ F A +T+G +
Sbjct: 247 LAYKKWGLQDVDTIVDHVSVGIMTLSPFDQMKTASTIGGFNATIKNNPPAMSQYITVGSN 306
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSF 148
F E S+ L+ A+ SK+ A F S + W+++Q + + +
Sbjct: 307 PFTGFFYALEGSSQPLLSHVALAVASKLTSAFFHAASGW--LGWKNKQEEEPVQKQKPKV 364
Query: 149 ARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA 205
A+PL + D R GER+ LSP SLAA+TD GR+LLLD + VR+WKGYRDA
Sbjct: 365 EPATPLAVRFGIPDSRRHGERICLSPCNSLAAVTDDFGRVLLLDVTRGLSVRMWKGYRDA 424
Query: 206 SCVFMEMLVN-----KDAATSSAYYAPVK-SDYCLCLAIHAPRKGIIEVWQMRTGPRLLT 259
+++++ + + SS + P S L I+APR+GI+EVW + GPR+
Sbjct: 425 QVGWIQIVEDLHEREAEKMDSSPFGTPQGPSRVAQFLVIYAPRRGILEVWSTQQGPRVGA 484
Query: 260 IQCAKGSKILQPTYRF 275
K ++L P Y+
Sbjct: 485 FNVGKHCRLLYPGYKI 500
>gi|327262454|ref|XP_003216039.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like isoform 2 [Anolis carolinensis]
Length = 1383
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 120/256 (46%), Gaps = 30/256 (11%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D G+M P M+ S+ F A +T+G +
Sbjct: 250 LAYKKWGLQDVDTIVDHVSVGIMTLSPFDQMKTASTIGGFNATIKNNPPAMSQYITVGSN 309
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSF 148
F E S+ L+ A+ SK+ A F S + W+++Q + + +
Sbjct: 310 PFTGFFYALEGSSQPLLSHVALAVASKLTSAFFHAASGW--LGWKNKQEEEPVQKQKPKV 367
Query: 149 ARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA 205
A+PL + D R GER+ LSP SLAA+TD GR+LLLD + VR+WKGYRDA
Sbjct: 368 EPATPLAVRFGIPDSRRHGERICLSPCNSLAAVTDDFGRVLLLDVTRGLSVRMWKGYRDA 427
Query: 206 SCVFMEMLVN-----KDAATSSAYYAPVK-SDYCLCLAIHAPRKGIIEVWQMRTGPRLLT 259
+++++ + + SS + P S L I+APR+GI+EVW + GPR+
Sbjct: 428 QVGWIQIVEDLHEREAEKMDSSPFGTPQGPSRVAQFLVIYAPRRGILEVWSTQQGPRVGA 487
Query: 260 IQCAKGSKILQPTYRF 275
K ++L P Y+
Sbjct: 488 FNVGKHCRLLYPGYKI 503
>gi|410986551|ref|XP_003999573.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like, partial [Felis catus]
Length = 771
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 137/288 (47%), Gaps = 34/288 (11%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 251 LAYKKWGLQDIDTIIDHASIGIMTLSPFDQMKTASNVGGFNAAIKNSPPAMSQYITVGSN 310
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPK---KSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S+ + K +PK
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEVVPKQKPKV 368
Query: 146 QSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA 205
+ A + L D R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA
Sbjct: 369 EPAAPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDA 428
Query: 206 SCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPRLLT 259
+M+++ + + A ++P S L I+APR+GI+EVW + GPR+
Sbjct: 429 QIGWMQIVEDLHERVPEKADFSPFGNTQGPSRVAQFLVIYAPRRGILEVWGTQQGPRVGA 488
Query: 260 IQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 489 FNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536
>gi|397471286|ref|XP_003807227.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Pan paniscus]
Length = 1393
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 141/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 251 LAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 310
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 368
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 369 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 425
Query: 203 RDASCVFMEML------VNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ V + A SS + S L I+APR+GI+EVW + GPR
Sbjct: 426 RDAQIGWIQIVEDLHERVPEKADFSSFGNSQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 485
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 486 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536
>gi|332231895|ref|XP_003265130.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Nomascus leucogenys]
Length = 1393
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 141/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 251 LAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 310
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 368
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 369 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 425
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + A ++P S L I+APR+GI+EVW + GPR
Sbjct: 426 RDAQIGWIQIVEDLHERVPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 485
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 486 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536
>gi|402857168|ref|XP_003893142.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Papio anubis]
Length = 1352
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 141/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 251 LAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 310
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 368
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 369 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 425
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + A ++P S L I+APR+GI+EVW + GPR
Sbjct: 426 RDAQIGWIQIVEDLHERIPEKADFSPFGNTQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 485
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 486 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536
>gi|355745903|gb|EHH50528.1| hypothetical protein EGM_01375 [Macaca fascicularis]
gi|380786945|gb|AFE65348.1| rab3 GTPase-activating protein non-catalytic subunit [Macaca
mulatta]
gi|383409259|gb|AFH27843.1| rab3 GTPase-activating protein non-catalytic subunit [Macaca
mulatta]
Length = 1393
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 141/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 251 LAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 310
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 368
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 369 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 425
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + A ++P S L I+APR+GI+EVW + GPR
Sbjct: 426 RDAQIGWIQIVEDLHERVPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 485
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 486 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536
>gi|301769281|ref|XP_002920055.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Ailuropoda melanoleuca]
Length = 1393
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 141/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 250 LAYKKWGLQDIDTIIDHASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 309
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 310 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 367
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 368 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 424
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + A ++P S L I+APR+GI+EVW + GPR
Sbjct: 425 RDAQIGWIQIVEDLHERVPEKADFSPFGNTQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 484
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 485 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 535
>gi|109018221|ref|XP_001103011.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Macaca mulatta]
Length = 1393
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 141/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 251 LAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 310
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 368
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 369 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 425
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + A ++P S L I+APR+GI+EVW + GPR
Sbjct: 426 RDAQIGWIQIVEDLHERVPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 485
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 486 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536
>gi|114572726|ref|XP_514211.2| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Pan troglodytes]
gi|410224106|gb|JAA09272.1| RAB3 GTPase activating protein subunit 2 (non-catalytic) [Pan
troglodytes]
gi|410252186|gb|JAA14060.1| RAB3 GTPase activating protein subunit 2 (non-catalytic) [Pan
troglodytes]
gi|410252188|gb|JAA14061.1| RAB3 GTPase activating protein subunit 2 (non-catalytic) [Pan
troglodytes]
gi|410303536|gb|JAA30368.1| RAB3 GTPase activating protein subunit 2 (non-catalytic) [Pan
troglodytes]
gi|410338517|gb|JAA38205.1| RAB3 GTPase activating protein subunit 2 (non-catalytic) [Pan
troglodytes]
Length = 1393
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 141/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 251 LAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 310
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 368
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 369 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 425
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + A ++P S L I+APR+GI+EVW + GPR
Sbjct: 426 RDAQIGWIQIVEDLHERVPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 485
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 486 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536
>gi|74006191|ref|XP_536122.2| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Canis lupus familiaris]
Length = 1394
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 141/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 251 LAYKKWGLQDIDTIIDHASIGIMTLSPFDQMKTASNIGGFNAAIKNSLPAMSQYITVGSN 310
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 368
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 369 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 425
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + A ++P S L I+APR+GI+EVW + GPR
Sbjct: 426 RDAQIGWIQIVEDLHERVPEKADFSPFGNTQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 485
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 486 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536
>gi|403277744|ref|XP_003930510.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Saimiri boliviensis boliviensis]
Length = 1386
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 140/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 251 LAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 310
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWR---SEQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+ E++ +K +PK
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKGKHEEEAVQKQKPKV 368
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 369 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 425
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + A ++P S L I+APR+GI+EVW + GPR
Sbjct: 426 RDAQIGWIQIVEDLHERVPEKAEFSPFGNSQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 485
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 486 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536
>gi|3608356|gb|AAC35881.1| rab3-GAP regulatory domain [Homo sapiens]
Length = 1393
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 251 LAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGRFNAAIKNSPPAMSQYITVGSN 310
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 368
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 369 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 425
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++ + + + A ++P S L I+APR+GI+EVW + GPR
Sbjct: 426 RDAQIGWIQTVEDLHERVPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 485
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 486 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536
>gi|348577005|ref|XP_003474275.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Cavia porcellus]
Length = 1416
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 123/237 (51%), Gaps = 25/237 (10%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
+T+G + F E ++ L+ A+ SK+ A F+ S + W+S E++ +
Sbjct: 333 ITVGANPFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQ 390
Query: 140 KSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
K PK + A+PL L D R GE + LSP +LAA+TD GR++LLD + V
Sbjct: 391 KQRPKVEP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVTRGIAV 447
Query: 197 RLWKGYRDASCVFMEMLVN-KDAATSSAYYAPVKSD-----YCLCLAIHAPRKGIIEVWQ 250
R+WKGYRDA + +++ + ++ A S AP S L I+APR+GI+EVW
Sbjct: 448 RMWKGYRDAQVGWAQIVEDLQERAPDSTDGAPFGSTQGPSRVAQFLVIYAPRRGILEVWS 507
Query: 251 MRTGPRLLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ GPR+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 508 TQQGPRVGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 564
>gi|19923790|ref|NP_036546.2| rab3 GTPase-activating protein non-catalytic subunit [Homo sapiens]
gi|62511132|sp|Q9H2M9.1|RBGPR_HUMAN RecName: Full=Rab3 GTPase-activating protein non-catalytic subunit;
AltName: Full=RGAP-iso; AltName: Full=Rab3
GTPase-activating protein 150 kDa subunit; AltName:
Full=Rab3-GAP p150; Short=Rab3-GAP150; AltName:
Full=Rab3-GAP regulatory subunit
gi|12005821|gb|AAG44636.1|AF255648_1 rGAP-iso [Homo sapiens]
gi|20521672|dbj|BAA74862.2| KIAA0839 protein [Homo sapiens]
gi|119613710|gb|EAW93304.1| RAB3 GTPase activating protein subunit 2 (non-catalytic) [Homo
sapiens]
gi|148922274|gb|AAI46761.1| RAB3 GTPase activating protein subunit 2 (non-catalytic) [Homo
sapiens]
gi|158255904|dbj|BAF83923.1| unnamed protein product [Homo sapiens]
gi|168267612|dbj|BAG09862.1| RAB3 GTPase-activating protein non-catalytic subunit [synthetic
construct]
Length = 1393
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 251 LAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 310
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 368
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 369 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 425
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++ + + + A ++P S L I+APR+GI+EVW + GPR
Sbjct: 426 RDAQIGWIQTVEDLHERVPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 485
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 486 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536
>gi|297661945|ref|XP_002809484.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Pongo abelii]
Length = 1393
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G
Sbjct: 251 LAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSS 310
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 368
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 369 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 425
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + A ++P S L I+APR+GI+EVW + GPR
Sbjct: 426 RDAQIGWIQIVEDLHERVPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 485
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 486 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536
>gi|296230057|ref|XP_002760544.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Callithrix jacchus]
Length = 1392
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 140/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 251 LAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 310
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWR---SEQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+ E++ +K +PK
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKGKHEEEAVQKQKPKV 368
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 369 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 425
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + A ++P S L I+APR+GI+EVW + GPR
Sbjct: 426 RDAQIGWIQVVEDLHERVPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 485
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 486 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536
>gi|426333837|ref|XP_004028475.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Gorilla gorilla gorilla]
Length = 1417
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 124/237 (52%), Gaps = 25/237 (10%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
+T+G + F E ++ L+ A+ SK+ A F+ S + W+S E++ +
Sbjct: 305 ITVGSNPFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQ 362
Query: 140 KSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
K +PK + A+PL L D R GE + LSP +LAA+TD GR++LLD + +
Sbjct: 363 KQKPKVEP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAI 419
Query: 197 RLWKGYRDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQ 250
R+WKGYRDA +++++ + + A ++P S L I+APR+GI+EVW
Sbjct: 420 RMWKGYRDAQIGWIQIVEDLHERVPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILEVWS 479
Query: 251 MRTGPRLLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ GPR+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 480 TQQGPRVGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536
>gi|348520730|ref|XP_003447880.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Oreochromis niloticus]
Length = 1368
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 118/232 (50%), Gaps = 21/232 (9%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWR----SEQSP 138
VT+G + E S+ L+ A+ SK+ A FS S + W E++P
Sbjct: 310 VTVGSGPYTGFYYAIEGSSQPLLSHVAMAVASKLTSALFSAASGW--LGWNKNKNEEEAP 367
Query: 139 KKSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVV 195
+K +PK + A+PL+ L D R GE + LSP +LA +TD GR+ LLD +
Sbjct: 368 QKQKPKVEP---ATPLSIRFGLPDSRRHGESICLSPCNTLAGVTDDFGRVTLLDLARGIA 424
Query: 196 VRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGP 255
+R+WKGYRDA ++++ + S A + + L L I+APR+GI+EVW M+ GP
Sbjct: 425 IRMWKGYRDAQLGWLQVPEERSERDLSP-SASLPRRHALFLIIYAPRRGILEVWAMQQGP 483
Query: 256 RLLTIQCAKGSKILQPTYRF-GSSMASSPYVPL---EVFLLNGDSGQLSVLN 303
R+ K ++L YR G + +S L +V LL+ +G L +N
Sbjct: 484 RVGAFTVGKHCRLLYAGYRLMGVNSVTSQGWQLHTQQVCLLDPITGALRTVN 535
>gi|126307101|ref|XP_001375651.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Monodelphis domestica]
Length = 1392
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 133/288 (46%), Gaps = 34/288 (11%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 253 LAYKKWGLQDIDTIIDHASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 312
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSF 148
F E S+ L+ A+ SK+ A F+ S + W+S+ + + +
Sbjct: 313 PFTGFFYALEGSSQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEENVQKQKPKV 370
Query: 149 ARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA 205
A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA
Sbjct: 371 EPATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGLAIRMWKGYRDA 430
Query: 206 SCVFMEMLVNKDAATSSAY------YAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLT 259
+++++ + S A S L I+APR+GI+EVW + GPR+
Sbjct: 431 QIGWIQIIEDLHERESEKIDLSPFGNAQGPSRVAQFLVIYAPRRGILEVWSTQQGPRVGA 490
Query: 260 IQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 491 FNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSIKTVN 538
>gi|395531403|ref|XP_003767768.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Sarcophilus harrisii]
Length = 1235
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 252 LAYKKWGLQDIDTIIDHASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 311
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E S+ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 312 PFTGFFYALEGSSQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 369
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 370 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGLAIRMWKGY 426
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVKSD-----YCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + + +P S L I+APR+GI+EVW + GPR
Sbjct: 427 RDAQIGWIQIVEDLHERESEKMDLSPFGSTQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 486
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 487 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSIKTVN 537
>gi|291402372|ref|XP_002717440.1| PREDICTED: rab3 GTPase-activating protein, non-catalytic subunit
[Oryctolagus cuniculus]
Length = 1407
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 140/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 265 LAYKKWGLQDIDTIIDHASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 324
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 325 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 382
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 383 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVSRGIAIRMWKGY 439
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + ++P S L I+APR+GI+EVW + GPR
Sbjct: 440 RDAQIGWIQIVEDLHERVPEKVDFSPFGNTQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 499
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 500 VGAFNVGKHCRLLYPGYKIMGLNNVISQSWQPQTYQICLVDPVSGSVKTVN 550
>gi|281604211|ref|NP_001035244.2| rab3 GTPase-activating protein non-catalytic subunit [Rattus
norvegicus]
Length = 1387
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G
Sbjct: 250 LAYKKWGLQDIDTIIDHASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSS 309
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A FS S + W+S E++ +K +PK
Sbjct: 310 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFSAASGW--LGWKSKHEEETVQKQKPKM 367
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 368 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 424
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + ++P S L I+APR+GI+EVW + GPR
Sbjct: 425 RDAQIGWIQIVEDLHERVPEKGDFSPFGNTQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 484
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ S + V+N
Sbjct: 485 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSASVKVVN 535
>gi|255003797|ref|NP_001157271.1| rab3 GTPase-activating protein non-catalytic subunit [Taeniopygia
guttata]
Length = 1383
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSE 142
VT+G + F E S+ L+ A+ SK+ A F+ S + W+S+ + +
Sbjct: 303 VTVGANPFTGFFFALEGSSQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEPVQ 360
Query: 143 PKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLW 199
+ A+PL L D R GER+ LSP +LAA+TD GR++LLD + VR+W
Sbjct: 361 KQKPKVEPATPLAVRFGLPDSRRHGERICLSPCNTLAAVTDEFGRVILLDVTRGLAVRMW 420
Query: 200 KGYRDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRT 253
KGYRDA +++ + + ++ T +P S L I+APR+GI+EVW +
Sbjct: 421 KGYRDAEVGWIQTVEDLQERETEKMDSSPFGNAQGPSRVAQFLVIYAPRRGILEVWSTQQ 480
Query: 254 GPRLLTIQCAKGSKILQPTYRF 275
GPR+ K ++L P Y+
Sbjct: 481 GPRVGAFNVGKYCRLLYPGYKI 502
>gi|62511118|sp|Q8BMG7.2|RBGPR_MOUSE RecName: Full=Rab3 GTPase-activating protein non-catalytic subunit;
AltName: Full=Rab3 GTPase-activating protein 150 kDa
subunit; AltName: Full=Rab3-GAP p150; Short=Rab3-GAP150;
AltName: Full=Rab3-GAP regulatory subunit
Length = 1366
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 30/256 (11%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G
Sbjct: 249 LAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSS 308
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSF 148
F E ++ L+ A+ SK+ A FS S + W+S+ + +
Sbjct: 309 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFSAASGW--LGWKSKHEEDTVQKQKPKM 366
Query: 149 ARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA 205
A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA
Sbjct: 367 EPATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDA 426
Query: 206 SCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPRLLT 259
+++++ + + ++P S L I+APR+GI+EVW + GPR+
Sbjct: 427 QVGWIQIVEDLHERVPEKGGFSPFGNTQGPSRVAQFLVIYAPRRGILEVWNTQQGPRVGA 486
Query: 260 IQCAKGSKILQPTYRF 275
K ++L P Y+
Sbjct: 487 FNVGKHCRLLYPGYKI 502
>gi|62510946|sp|Q5U1Z0.2|RBGPR_RAT RecName: Full=Rab3 GTPase-activating protein non-catalytic subunit;
AltName: Full=Rab3 GTPase-activating protein 150 kDa
subunit; AltName: Full=Rab3-GAP p150; Short=Rab3-GAP150;
AltName: Full=Rab3-GAP regulatory subunit
Length = 1386
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 123/259 (47%), Gaps = 36/259 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G
Sbjct: 249 LAYKKWGLQDIDTIIDHASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSS 308
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A FS S + W+S E++ +K +PK
Sbjct: 309 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFSAASGW--LGWKSKHEEETVQKQKPKM 366
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 367 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 423
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + ++P S L I+APR+GI+EVW + GPR
Sbjct: 424 RDAQIGWIQIVEDLHERVPEKGDFSPFGNTQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 483
Query: 257 LLTIQCAKGSKILQPTYRF 275
+ K ++L P Y+
Sbjct: 484 VGAFNVGKHCRLLYPGYKI 502
>gi|255003810|ref|NP_001157226.1| rab3 GTPase-activating protein non-catalytic subunit [Mus musculus]
Length = 1387
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 30/256 (11%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G
Sbjct: 250 LAYKKWGLQDIDTIIDHASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSS 309
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSF 148
F E ++ L+ A+ SK+ A FS S + W+S+ + +
Sbjct: 310 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFSAASGW--LGWKSKHEEDTVQKQKPKM 367
Query: 149 ARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA 205
A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA
Sbjct: 368 EPATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDA 427
Query: 206 SCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPRLLT 259
+++++ + + ++P S L I+APR+GI+EVW + GPR+
Sbjct: 428 QVGWIQIVEDLHERVPEKGGFSPFGNTQGPSRVAQFLVIYAPRRGILEVWNTQQGPRVGA 487
Query: 260 IQCAKGSKILQPTYRF 275
K ++L P Y+
Sbjct: 488 FNVGKHCRLLYPGYKI 503
>gi|149743780|ref|XP_001488184.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Equus caballus]
Length = 1393
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 139/291 (47%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G
Sbjct: 251 LAYKKWGLQDIDTIIDHASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSS 310
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 368
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 369 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 425
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + ++P S L I+APR+GI+EVW + GPR
Sbjct: 426 RDAQTGWIQIVEDLHERVPEKVDFSPFGNTQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 485
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 486 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGGVKTVN 536
>gi|426239493|ref|XP_004013655.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Ovis aries]
Length = 1392
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 122/237 (51%), Gaps = 25/237 (10%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
+T+G F E ++ L+ A+ SK+ A F+ S + W+S E++ +
Sbjct: 304 ITVGSSPFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQ 361
Query: 140 KSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
K +PK + A+PL L D R GE + LSP +LAA+TD GR++LLD + +
Sbjct: 362 KQKPKVEP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAI 418
Query: 197 RLWKGYRDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQ 250
R+WKGYRDA +++++ + + ++P S L I+APR+GI+EVW
Sbjct: 419 RMWKGYRDAQTGWIQIVEDLHERVPEKGDFSPFGSPQGPSRVAQFLVIYAPRRGILEVWS 478
Query: 251 MRTGPRLLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ GPR+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 479 TQQGPRVGAFNVGKHCRLLYPGYKIMGLNNITSQSWQPQTYQICLVDPVSGSVKTVN 535
>gi|156368645|ref|XP_001627803.1| predicted protein [Nematostella vectensis]
gi|156214723|gb|EDO35703.1| predicted protein [Nematostella vectensis]
Length = 575
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 20/234 (8%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMI-WRSEQSPKKS 141
V G D ++ + E L+ A+ SK+ A S +S+ S + W S+ + + +
Sbjct: 243 VASGADPFLAVYCAIEGSGPPLISDVAMAVASKLTSAVLSRLSAASGWLGWGSKPAAQPA 302
Query: 142 E------PKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVV 195
E PK + A+ + L D PR+G +TL+P+G +A TD GR++LLD + +
Sbjct: 303 EQTKPPKPKVEKGAKLAARFGLPDFPRRGTNITLAPNGKVAVTTDEFGRVMLLDVKKGIA 362
Query: 196 VRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGP 255
+R+WKGYR+A C + ++V++D TS + L L I+A ++GI+E+W+ GP
Sbjct: 363 IRMWKGYREAECGW--IMVDEDDFTSHEPSTNEQHRTALFLVIYAAKRGILEIWRAEQGP 420
Query: 256 RLLTIQCAKGSKILQPTY---RFGSSMASS---PYVPLEVFLLNGDSGQLSVLN 303
R+ K ++L + G + P L L+ GD G+L V++
Sbjct: 421 RVAAFNIGKDCRLLYAGHGIMGLGHVIRQGLAPPQHTLNCTLIQGD-GRLKVIS 473
>gi|345329564|ref|XP_001511701.2| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Ornithorhynchus anatinus]
Length = 1691
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 465 LAYKKWGLQDVDTIIDHASIGIMTLSPFDQMKTASNIGGFNATIKNSPPAMSQYITVGSN 524
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 525 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 582
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 583 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGLAIRMWKGY 639
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ + + + +P S L I+APR+GI+EVW + GPR
Sbjct: 640 RDAQIGWVQVIEDLHERESEKTDLSPFGNTQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 699
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ ++G + +N
Sbjct: 700 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTHQICLVDPEAGGVKTVN 750
>gi|311265237|ref|XP_003130554.1| PREDICTED: LOW QUALITY PROTEIN: rab3 GTPase-activating protein
non-catalytic subunit-like [Sus scrofa]
Length = 1392
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSE 142
+T+G + F E ++ L+ A+ SK+ A F+ S W +S + E
Sbjct: 304 ITVGSNPFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASG-----WLGWKSKHEEE 358
Query: 143 PKPQSFARASPLT------CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
P+ + P T L D R GE + LSP +LAA+TD GR++LLD + +
Sbjct: 359 AVPRQKPKVEPATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVTRGIAI 418
Query: 197 RLWKGYRDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQ 250
R+WKGYRDA +++++ + + A ++P S L I+APR+GI+EVW
Sbjct: 419 RMWKGYRDAQTGWIQIVEDLHERVPERADFSPFGSPQGPSRVAQFLVIYAPRRGILEVWS 478
Query: 251 MRTGPRLLTIQCAKGSKILQPTYRF 275
+ GPR+ K ++L P Y+
Sbjct: 479 TQQGPRVGAFNVGKHCRLLYPGYKI 503
>gi|281344739|gb|EFB20323.1| hypothetical protein PANDA_008738 [Ailuropoda melanoleuca]
Length = 1397
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 140/295 (47%), Gaps = 44/295 (14%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 250 LAYKKWGLQDIDTIIDHASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 309
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 310 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKV 367
Query: 146 QSFARASPLTC-------LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRL 198
+ A+P L D R GE + LSP +LAA+TD GR++LLD + +R+
Sbjct: 368 EP---ATPFLFSFKIRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRM 424
Query: 199 WKGYRDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMR 252
WKGYRDA +++++ + + A ++P S L I+APR+GI+EVW +
Sbjct: 425 WKGYRDAQIGWIQIVEDLHERVPEKADFSPFGNTQGPSRVAQFLVIYAPRRGILEVWSTQ 484
Query: 253 TGPRLLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
GPR+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 485 QGPRVGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 539
>gi|417406408|gb|JAA49864.1| Putative rab3 gtpase-activating protein non-catalytic subunit
[Desmodus rotundus]
Length = 1396
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 36/259 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A VT+G +
Sbjct: 250 LAYKKWGLQDIDTIIDHASIGIMTLSPFDQMKTASNIGGFSAAIKNSPPAMSQYVTVGAN 309
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ K +PK
Sbjct: 310 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVPKQKPKV 367
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + +SP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 368 EP---ATPLAVRFGLPDSRRHGESICVSPCNTLAAVTDDFGRVVLLDVARGIAIRMWKGY 424
Query: 203 RDASCVFMEML------VNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPR 256
RDA +++++ V + +S A S L I+APR+GI+EVW + GPR
Sbjct: 425 RDAQIGWIQIVEDLHERVPEKVDSSPFGNAQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 484
Query: 257 LLTIQCAKGSKILQPTYRF 275
+ K ++L P Y+
Sbjct: 485 VGAFNVGKHCRLLYPGYKI 503
>gi|354465152|ref|XP_003495044.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Cricetulus griseus]
Length = 1372
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
+T+G F E ++ L+ A+ SK+ A FS S + W+S E++ +
Sbjct: 287 ITVGSSPFTGFFYALEGSTQPLLSHVALAVASKLTSALFSAASGW--LGWKSKHEEETIQ 344
Query: 140 KSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
K +PK + A+PL L D R GE + LSP +LAA+TD GR++LLD + +
Sbjct: 345 KQKPKMEP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVSRGIAI 401
Query: 197 RLWKGYRDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQ 250
R+WKGYRDA +++++ + + +P S L I+APR+GI+EVW
Sbjct: 402 RMWKGYRDAQIGWIQIVEDLHERVPEKGDLSPFGNTQGPSRVAQFLVIYAPRRGILEVWN 461
Query: 251 MRTGPRLLTIQCAKGSKILQPTYRF 275
+ GPR+ K ++L P Y+
Sbjct: 462 TQQGPRVGAFNVGKHCRLLYPGYKI 486
>gi|344236434|gb|EGV92537.1| Rab3 GTPase-activating protein non-catalytic subunit [Cricetulus
griseus]
Length = 1302
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
+T+G F E ++ L+ A+ SK+ A FS S + W+S E++ +
Sbjct: 217 ITVGSSPFTGFFYALEGSTQPLLSHVALAVASKLTSALFSAASGW--LGWKSKHEEETIQ 274
Query: 140 KSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
K +PK + A+PL L D R GE + LSP +LAA+TD GR++LLD + +
Sbjct: 275 KQKPKMEP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVSRGIAI 331
Query: 197 RLWKGYRDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQ 250
R+WKGYRDA +++++ + + +P S L I+APR+GI+EVW
Sbjct: 332 RMWKGYRDAQIGWIQIVEDLHERVPEKGDLSPFGNTQGPSRVAQFLVIYAPRRGILEVWN 391
Query: 251 MRTGPRLLTIQCAKGSKILQPTYRF 275
+ GPR+ K ++L P Y+
Sbjct: 392 TQQGPRVGAFNVGKHCRLLYPGYKI 416
>gi|344296450|ref|XP_003419920.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Loxodonta africana]
Length = 1384
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 115/255 (45%), Gaps = 29/255 (11%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G
Sbjct: 244 LAYKKWGLQDIDTVIDHASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSS 303
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSF 148
F E ++ L+ A+ SK+ A F+ S + W+S+ + + +
Sbjct: 304 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAIQRQKPKV 361
Query: 149 ARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA 205
A+PL L D R GE + LSP +LAA TD GR++LLD + +R+WKGYRDA
Sbjct: 362 EPATPLAVRFGLPDSRRHGESICLSPCNTLAAATDDFGRVILLDVARGIAIRMWKGYRDA 421
Query: 206 SCVFMEMLVNKDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTI 260
+++++ + +P S L I+APR+GI+EVW + GPR+
Sbjct: 422 QVGWIQVVEDLHERPEKVELSPFGNTQGPSRVAQFLVIYAPRRGILEVWSTQQGPRVGAF 481
Query: 261 QCAKGSKILQPTYRF 275
K ++L P Y+
Sbjct: 482 NVGKHCRLLYPGYKI 496
>gi|300794416|ref|NP_001179128.1| rab3 GTPase-activating protein non-catalytic subunit [Bos taurus]
gi|296479323|tpg|DAA21438.1| TPA: RAB3 GTPase activating protein subunit 2 (non-catalytic) [Bos
taurus]
Length = 1392
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
+T+G F E ++ L+ A+ SK+ A F+ S + W+S E++ +
Sbjct: 304 ITVGSSPFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAFQ 361
Query: 140 KSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
K +PK + A+PL L D R GE + LSP +LAA+TD GR++LLD + +
Sbjct: 362 KQKPKVEP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAI 418
Query: 197 RLWKGYRDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQ 250
R+WKGYRDA +++++ + + ++P S L I+APR+GI+EVW
Sbjct: 419 RMWKGYRDAQTGWIQIVEDLHERVPEKGDFSPFGSPQGPSRVAQFLVIYAPRRGILEVWS 478
Query: 251 MRTGPRLLTIQCAKGSKILQPTYRF 275
+ GPR+ K ++L P Y+
Sbjct: 479 TQQGPRVGAFNVGKYCRLLYPGYKI 503
>gi|432940969|ref|XP_004082764.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Oryzias latipes]
Length = 1343
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 111 AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQ-SFARASPLTC---LKDHPRKGER 166
A+ SK+ A FS S + W ++ + S PK + A+PL L D R GE
Sbjct: 401 AVASKLTSALFSAASGW--LGWNKSKTEEDSTPKQRPKVEPATPLGIRFGLPDSRRHGES 458
Query: 167 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK-DAATSSAYY 225
+ LSP +LA +TD GR+ LLD + +R+WKGYRDA ++++ + D S
Sbjct: 459 ICLSPCNTLAGVTDDFGRVTLLDLARGISIRMWKGYRDAQLGWLQVREERGDRDFSPTGS 518
Query: 226 APVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRF-GSSMASSPY 284
P + + L L I+APR+GI+EVW M+ GPR+ K ++L YR G + +S
Sbjct: 519 MPRR--HALFLIIYAPRRGILEVWAMQRGPRVGAFTVGKHCRLLYAGYRLMGVNSVTSQG 576
Query: 285 VPL---EVFLLNGDSGQLSVLN 303
L +V LL+ SG L +N
Sbjct: 577 WQLHTQQVCLLDPSSGVLRTVN 598
>gi|395836200|ref|XP_003791050.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Otolemur garnettii]
Length = 1385
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 40/291 (13%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 243 LAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 302
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWR---SEQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+ E++ +K +PK
Sbjct: 303 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKGKHEEEAVQKQKPKV 360
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGY
Sbjct: 361 EP---ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGY 417
Query: 203 RDASCVFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPR 256
R A +++++ + + ++P S L I+APR+GI+EVW + GPR
Sbjct: 418 RGAQIGWIQIVEDLHERVPEKVDFSPFGNTQGPSRVAQFLVIYAPRRGILEVWSTQQGPR 477
Query: 257 LLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
+ K ++L P Y+ +++ S + P ++ L++ SG + +N
Sbjct: 478 VGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 528
>gi|198416987|ref|XP_002121049.1| PREDICTED: similar to rab3 GTPase-activating protein, non-catalytic
subunit [Ciona intestinalis]
Length = 1369
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 107/198 (54%), Gaps = 12/198 (6%)
Query: 111 AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPL---TCLKDHPRKGERL 167
A+ SK+ A F+ S ++ S +S+ KP+ +PL + L D R+G +
Sbjct: 328 AVASKLKSALFNAASGWLSWGKGAKPSEDQSKQKPK-VELGTPLDIRSGLPDLRRQGHSI 386
Query: 168 TLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAP 227
L+PS L A TDS GR++LLD +R+WKGYRDA F+ + D +P
Sbjct: 387 VLAPSAWLGATTDSFGRVMLLDLNKGYALRIWKGYRDAQIAFVRS--HDDTQKHRHSSSP 444
Query: 228 VKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYR-FGSSMASSPYVP 286
+S L L I+APR+G++E+W GPR+ +K +++L P Y+ FG + +S+ + P
Sbjct: 445 PRS--ALFLVIYAPRRGLLEIWSCINGPRVGAFNISKNARLLCPGYKMFGMNNSSTTHTP 502
Query: 287 --LEVFLLNGDSGQLSVL 302
LE +L G G++ V+
Sbjct: 503 SMLECCVL-GTDGEVQVI 519
>gi|432106275|gb|ELK32161.1| Rab3 GTPase-activating protein non-catalytic subunit, partial
[Myotis davidii]
Length = 1470
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 125/270 (46%), Gaps = 47/270 (17%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 191 LAYKKWGLQDVDTIVDHASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 250
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 251 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSRHEEEAVQKQKPKM 308
Query: 146 QSFARASPLTC--------------LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQ 191
+ A+PL L D R GE + LSP SLAA+TD GR++LLD
Sbjct: 309 EP---ATPLAVRQVGHALLKLGWFGLPDSRRHGESICLSPCNSLAAVTDDFGRVILLDVT 365
Query: 192 ALVVVRLWKGYRDASCVFMEMLVN-----KDAATSSAYYAPVK-SDYCLCLAIHAPRKGI 245
+ +R+WKGYRDA +++++ + + S + +P S L I+APR+GI
Sbjct: 366 RGIAIRMWKGYRDAQIGWVQVVEDLHERVPEKGDPSPFGSPQGPSRVAQFLVIYAPRRGI 425
Query: 246 IEVWQMRTGPRLLTIQCAKGSKILQPTYRF 275
+EVW + GPR+ K ++L P Y+
Sbjct: 426 LEVWSTQQGPRVGAFNVGKHCRLLYPGYKI 455
>gi|431902427|gb|ELK08927.1| Rab3 GTPase-activating protein non-catalytic subunit [Pteropus
alecto]
Length = 1399
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 44/268 (16%)
Query: 48 LPHQLWNVSKYGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGED 92
L ++ W + D A G+M P M+ S+ F A +T+G +
Sbjct: 251 LAYKKWGLQDIDTIIDHASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSN 310
Query: 93 SVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKP 145
F E ++ L+ A+ SK+ A F+ S + W+S E++ +K +PK
Sbjct: 311 PFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEETVQKQKPKL 368
Query: 146 QSF-------ARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVV 195
+ R +PLT L D R GE + LSP +LAA+TD GR++LLD +
Sbjct: 369 EPATPLAVRQVRRAPLTGQFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIA 428
Query: 196 VRLWKGYRDASCVFMEMLVN--------KDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 247
+R+WKGYRDA + +++ + D + P + L I+APR+GI+E
Sbjct: 429 IRMWKGYRDAQTGWTQVVEDLHERVPERGDPSRFGGAQGPGR--VAQFLVIYAPRRGILE 486
Query: 248 VWQMRTGPRLLTIQCAKGSKILQPTYRF 275
VW + GPR+ K ++L P Y+
Sbjct: 487 VWGAQQGPRVAAFNVGKHCRLLYPGYKI 514
>gi|307198625|gb|EFN79470.1| Rab3 GTPase-activating protein non-catalytic subunit [Harpegnathos
saltator]
Length = 1236
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 86/152 (56%), Gaps = 8/152 (5%)
Query: 132 WRSEQSPKKSEPKPQSFARAS--PLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRIL 186
+RS SE +S S +TC L D R+G+ +T SP+ L+ I+D++GR++
Sbjct: 273 FRSSSKTATSEATSKSNIHESIETMTCRFGLSDIMREGDCITCSPNKVLSVISDAMGRVI 332
Query: 187 LLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY---CLCLAIHAPRK 243
L++ + + VR+WKGYRDA C ++E+ KD P++ + L I+AP+K
Sbjct: 333 LINNKKGIAVRMWKGYRDAQCGWIEVNEEKDRGIHKNINRPMQKTLLRTTMFLVIYAPKK 392
Query: 244 GIIEVWQMRTGPRLLTIQCAKGSKILQPTYRF 275
G+I++W ++ GP++ T +K ++L Y F
Sbjct: 393 GVIDIWSIQQGPKITTFTASKNGRLLYINYGF 424
>gi|351696471|gb|EHA99389.1| Rab3 GTPase-activating protein non-catalytic subunit
[Heterocephalus glaber]
Length = 1373
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 120/248 (48%), Gaps = 33/248 (13%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSE------- 135
+T+G F E + L+ A+ SK+ A F+ S + W+S+
Sbjct: 305 ITVGASPFTGFFYALEGSTPPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEPVQ 362
Query: 136 -QSPKKSEPKPQSFARASP---------LTCLKDHPRKGERLTLSPSGSLAAITDSLGRI 185
Q PK P + + SP + L D R GE + LSP +LAA+TD GR+
Sbjct: 363 RQKPKVEPASPLAVRQVSPAAPSSGLEGIFGLPDSRRHGESICLSPCNTLAAVTDDFGRV 422
Query: 186 LLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDAATSSAYYAPVKSD-----YCLCLAIH 239
+LLD + VR+WKGYRDA +++++ + ++ A +P +S L I+
Sbjct: 423 ILLDVARGIAVRMWKGYRDAQAGWVQVVEDLQERVPGRADCSPFRSGQGPSRVAQFLVIY 482
Query: 240 APRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFG--SSMASSPYVP--LEVFLLNGD 295
APR+GI+EVW + GPR+ K ++L P Y+ +++ S + P ++ L++
Sbjct: 483 APRRGILEVWGTQQGPRVGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLMDPV 542
Query: 296 SGQLSVLN 303
SG + +N
Sbjct: 543 SGSVKTVN 550
>gi|410925973|ref|XP_003976453.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Takifugu rubripes]
Length = 1280
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 20/200 (10%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWR----SEQSP 138
V++G I + E S+ L+ A+ SK+ A F+ S + W E++
Sbjct: 297 VSVGGGPYIGFYYAVEGSSQPLLSHVALAVASKLTSALFNAASGW--LGWNKNRSEEETV 354
Query: 139 KKSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVV 195
+K +PK + A+PL L D R GE + LSP LA +TD GR+ LLD +
Sbjct: 355 QKQKPKVEP---ATPLGIRFGLPDSRRHGESICLSPCNMLAGVTDDFGRVALLDLARGIC 411
Query: 196 VRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGP 255
+R+WKGYRDA ++++ + SS+ + + L L I+APR+GI+EVW M+ GP
Sbjct: 412 IRMWKGYRDAQLGWLQVQEERGDHDSSS----LPKRHALFLVIYAPRRGILEVWAMKQGP 467
Query: 256 RLLTIQCAKGSKILQPTYRF 275
R+ K ++L +R
Sbjct: 468 RVGAFNVGKHCRLLYAGHRL 487
>gi|120537496|gb|AAI29146.1| Rab3gap2 protein [Danio rerio]
Length = 1143
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
+T+G F E S+ L+ A+ SK+ A FS S + W+S E+S +
Sbjct: 305 ITVGGGPYTGFFYAIEGSSQPLLSHVALAVASKLTSALFSAASGW--LGWKSKNEEESVQ 362
Query: 140 KSEPKPQSFARASPLT-CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRL 198
K +PK + A A P+ L D R GE + LSP ++A +TD GR+ LLD + +R+
Sbjct: 363 KQKPKVEP-ATALPVRFGLPDSRRHGESICLSPCNTMAGVTDDFGRVTLLDVARGIAIRM 421
Query: 199 WKGYRDASCVFM---EMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGP 255
WKGYRDA ++ E +D ATS + + + L I+APR+GI+EVW + GP
Sbjct: 422 WKGYRDAQLGWVQVSEARGERDIATSPS----MPRRHAQFLVIYAPRRGILEVWGTQHGP 477
Query: 256 RLLTIQCAKGSKILQPTYRF 275
R+ K ++L +R
Sbjct: 478 RVGAFTVGKHCRLLYGGHRL 497
>gi|52218910|ref|NP_001004528.1| rab3 GTPase-activating protein non-catalytic subunit [Danio rerio]
Length = 1270
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPK 139
+T+G F E S+ L+ A+ SK+ A FS S + W+S E+S +
Sbjct: 297 ITVGGGPYTGFFYAIEGSSQPLLSHVALAVASKLTSALFSAASGW--LGWKSKNEEESVQ 354
Query: 140 KSEPKPQSFARASPLTC-LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRL 198
K +PK + A A P+ L D R GE + LSP ++A +TD GR+ LLD + +R+
Sbjct: 355 KQKPKVEP-ATALPVRFGLPDSRRHGESICLSPCNTMAGVTDDFGRVTLLDVARGIAIRM 413
Query: 199 WKGYRDASCVFM---EMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGP 255
WKGYRDA ++ E +D ATS + + + L I+APR+GI+EVW + GP
Sbjct: 414 WKGYRDAQLGWVQVSEARGERDIATSPS----MPRRHAQFLVIYAPRRGILEVWGTQHGP 469
Query: 256 RLLTIQCAKGSKILQPTYRF 275
R+ K ++L +R
Sbjct: 470 RVGAFTVGKHCRLLYGGHRL 489
>gi|170029981|ref|XP_001842869.1| Rab3 GTPase-activating protein regulatory subunit [Culex
quinquefasciatus]
gi|167865329|gb|EDS28712.1| Rab3 GTPase-activating protein regulatory subunit [Culex
quinquefasciatus]
Length = 1287
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 92/167 (55%), Gaps = 12/167 (7%)
Query: 112 ILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTC---LKDHPRKGERLT 168
+L+ V A S I S + S ++ P+PQ + L C L D PR +
Sbjct: 269 VLADVARAVASKIKSALPSWFGGSSSTPQTPPEPQ-LPPSEALICRFGLCDLPRSAFSVW 327
Query: 169 LSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPV 228
L+P+ SLAA+ D+LGR++L+D + +R+WKGYRDA C F+E+ A A + V
Sbjct: 328 LAPNYSLAAVADTLGRVILIDCAKGIALRIWKGYRDAQCGFVEV------AEKVAKDSVV 381
Query: 229 KSD--YCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTY 273
K D L L I+APR+ ++EVW +++GP++ AK +++ T+
Sbjct: 382 KQDRRKALFLVIYAPRRSVLEVWSLQSGPKVAAFTAAKNGQLIYNTH 428
>gi|380027148|ref|XP_003697293.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like isoform 2 [Apis florea]
Length = 1365
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 77/136 (56%), Gaps = 6/136 (4%)
Query: 144 KPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK 200
K + P+TC L D R+G + SP+ +L+ I D++GR+LL+D + + +R+WK
Sbjct: 330 KTNTHEPIEPMTCRFGLSDVTREGYSIISSPNKALSVILDAMGRVLLIDNKCCIAIRMWK 389
Query: 201 GYRDASCVFMEMLVNKDAATSSAYYAPVKS---DYCLCLAIHAPRKGIIEVWQMRTGPRL 257
GYRDA C ++E+ K + A+ ++ L I+AP+KGII++W + GP++
Sbjct: 390 GYRDAQCGWIEVEEEKHSGMHKAFIKFKQTPQLRSAFFLVIYAPKKGIIDIWSTQQGPKI 449
Query: 258 LTIQCAKGSKILQPTY 273
T +K ++L Y
Sbjct: 450 TTFTASKHGRLLYINY 465
>gi|380027146|ref|XP_003697292.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like isoform 1 [Apis florea]
Length = 1416
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 77/136 (56%), Gaps = 6/136 (4%)
Query: 144 KPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK 200
K + P+TC L D R+G + SP+ +L+ I D++GR+LL+D + + +R+WK
Sbjct: 330 KTNTHEPIEPMTCRFGLSDVTREGYSIISSPNKALSVILDAMGRVLLIDNKCCIAIRMWK 389
Query: 201 GYRDASCVFMEMLVNKDAATSSAYYAPVKS---DYCLCLAIHAPRKGIIEVWQMRTGPRL 257
GYRDA C ++E+ K + A+ ++ L I+AP+KGII++W + GP++
Sbjct: 390 GYRDAQCGWIEVEEEKHSGMHKAFIKFKQTPQLRSAFFLVIYAPKKGIIDIWSTQQGPKI 449
Query: 258 LTIQCAKGSKILQPTY 273
T +K ++L Y
Sbjct: 450 TTFTASKHGRLLYINY 465
>gi|196014827|ref|XP_002117272.1| hypothetical protein TRIADDRAFT_61281 [Trichoplax adhaerens]
gi|190580237|gb|EDV20322.1| hypothetical protein TRIADDRAFT_61281 [Trichoplax adhaerens]
Length = 1289
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
Query: 82 RYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKS 141
RY A G D V+ + ++D+ S ++S V + S + QS +
Sbjct: 260 RYISA---GGDPVVGLYNAADDKIPSFASVVVSAVATKLKDAVLSAASGWLGFGQSTADA 316
Query: 142 EPKPQ--SFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
+PK Q + SPL L D R +++ +P+ +LA D+L R+LL+DT+ + +
Sbjct: 317 QPKVQKPNIESGSPLDLRYGLPDDKRVVDKIIPAPNSALAVTVDNLARVLLIDTETGMAI 376
Query: 197 RLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPR 256
R+WKGYRDA C ++++ S + S L L I+A R+GI+E+W M+ GPR
Sbjct: 377 RMWKGYRDAQCGWIQVF-----EQHSNHTGNQSSRRGLFLVIYAARRGILEIWLMQNGPR 431
Query: 257 LLTIQCAKGSKIL 269
+ K ++L
Sbjct: 432 VAVFNIGKNCRLL 444
>gi|390361477|ref|XP_790581.3| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Strongylocentrotus purpuratus]
Length = 1531
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSE 142
+T G + F E ++ L A+ SK+ A FS S ++Q+
Sbjct: 313 ITTGAGPFLGFFYALEGSAQPLFSDVALAVASKLKSAIFSAASGWFGF-GGNKQTTDTPA 371
Query: 143 PKPQSFARASPLTCLK------DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 196
P S R P L D R G+ + L+P LAA TDS GR+ L+D V V
Sbjct: 372 PSKTSKPRVEPAISLPIRFGLPDVRRHGDTIVLAPGMRLAASTDSFGRVSLIDVTRGVAV 431
Query: 197 RLWKGYRDASCVFMEML--VNKDAATSSAYYAPVKSD-------YCLCLAIHAPRKGIIE 247
R+WKGYRDA C +++++ ++++ + P S L L I+APR+GIIE
Sbjct: 432 RMWKGYRDAQCGWIQVIEDIHRERTSEHGSKRPRHSTDSKHGPRVALFLVIYAPRRGIIE 491
Query: 248 VWQMRTGPRLLTIQCAKGSKILQPTY 273
VW + GPR+ K ++L P Y
Sbjct: 492 VWNTQQGPRVAAFNVPKSCRLLYPGY 517
>gi|383859150|ref|XP_003705059.1| PREDICTED: LOW QUALITY PROTEIN: rab3 GTPase-activating protein
non-catalytic subunit-like [Megachile rotundata]
Length = 1380
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 133 RSEQSPKKSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLD 189
S+ P K + P+TC L D R+G + SP+ +L+ I D++GR++L+D
Sbjct: 314 NSKHQPSLETVKTSAHEPVEPMTCRFGLSDIMREGYSIISSPNKTLSVIIDAMGRVILID 373
Query: 190 TQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY---CLCLAIHAPRKGII 246
+ + +R+WKGYRDA C ++E+ K + + ++ L L I+AP+KG+I
Sbjct: 374 NRCGIALRMWKGYRDAQCGWIEVEEEKHSRMHKEFNKFKQTSQLRSALFLVIYAPKKGVI 433
Query: 247 EVWQMRTGPRLLTIQCAKGSKILQPTY 273
++W + GP++ T +K ++L Y
Sbjct: 434 DIWSTQQGPKITTFTASKHGRLLYINY 460
>gi|307178009|gb|EFN66870.1| Rab3 GTPase-activating protein non-catalytic subunit [Camponotus
floridanus]
Length = 1018
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 216
L D R+G+ + SP+ L+ I+D++GR+LL++ + V VRLWKGYRDA C ++E K
Sbjct: 340 LSDIMREGDCIVCSPNKMLSVISDAMGRVLLINNKRGVAVRLWKGYRDAQCGWIEATEEK 399
Query: 217 DAATSSAYYAPVKS---DYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTY 273
D + L L I+AP+KG+I++W ++ GP++ T +K ++L Y
Sbjct: 400 DRGIHRNINKSGRKILLRTALFLVIYAPKKGVIDIWSIQQGPKITTFTASKNGRLLYINY 459
Query: 274 RF 275
F
Sbjct: 460 GF 461
>gi|198475767|ref|XP_001357151.2| GA20070 [Drosophila pseudoobscura pseudoobscura]
gi|198137950|gb|EAL34218.2| GA20070 [Drosophila pseudoobscura pseudoobscura]
Length = 1351
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 30/247 (12%)
Query: 56 SKYGPCADAAITGLMPPPLME--VQSS--QRYFCAV-----------TIGEDSVISAFRL 100
+ G DAAI+ PP + VQ S Y+ V G + + F
Sbjct: 206 EREGIINDAAISSTQRPPTYDYIVQQSIGHGYYAKVHATPPRSSQVLAAGAEPYLGFFHA 265
Query: 101 SEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSF-ARASPLTC--- 156
E +G + V+ ++ + L + R+ P+ E P + +P+
Sbjct: 266 EEGYKTVSLGEVAKGVIGLAYNNL--LGGLFKRAPGPPQTPEDAPLPLPTKEAPMRIRCR 323
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 216
L D R G L ++P G LA +TD+L R++++DTQ +++R+WKGYRDA C F+ + K
Sbjct: 324 LYDGKRDGLTLAIAPGGRLAVVTDNLDRVMMVDTQQAIILRVWKGYRDAQCAFVPV---K 380
Query: 217 DAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFG 276
+ + K+ L L I+APR G +++W ++ GP++ +K +++ Y
Sbjct: 381 EKSVRGIKTHKRKA---LFLVIYAPRMGCLDIWALQNGPKVAAFTVSKSGQLI---YSNH 434
Query: 277 SSMASSP 283
S++ +P
Sbjct: 435 SALGVAP 441
>gi|157123799|ref|XP_001653918.1| hypothetical protein AaeL_AAEL009668 [Aedes aegypti]
gi|108874202|gb|EAT38427.1| AAEL009668-PA [Aedes aegypti]
Length = 1381
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 13/179 (7%)
Query: 112 ILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTC---LKDHPRKGERLT 168
+L+ V A S I S + W S ++ +PQ + PL C L D R +
Sbjct: 290 VLADVARAVASKIKS-ALPSWFGGSSAPQTPQEPQ-LPPSEPLICRFGLCDIQRNAFSVW 347
Query: 169 LSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPV 228
L+P+ +LAA+ D+LGRI+L+D + +R+WKGYRDA C F+E+ A A A
Sbjct: 348 LAPNYTLAAVADNLGRIILVDCMKGIALRIWKGYRDAQCGFVEV------AEKQAKDAVT 401
Query: 229 KSD--YCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASSPYV 285
K D + L I+APR+ ++EVW ++ GP++ AK +++ T+ F ++S V
Sbjct: 402 KQDRRKAMFLVIYAPRRSVLEVWSLQNGPKVGAFTAAKNGQLVYNTHSFMGVSSNSSKV 460
>gi|34784318|gb|AAH57872.1| Rab3gap2 protein [Mus musculus]
Length = 1001
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 151 ASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASC 207
A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA
Sbjct: 4 ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQV 63
Query: 208 VFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQ 261
+++++ + + ++P S L I+APR+GI+EVW + GPR+
Sbjct: 64 GWIQIVEDLHERVPEKGGFSPFGNTQGPSRVAQFLVIYAPRRGILEVWNTQQGPRVGAFN 123
Query: 262 CAKGSKILQPTYRF 275
K ++L P Y+
Sbjct: 124 VGKHCRLLYPGYKI 137
>gi|26327105|dbj|BAC27296.1| unnamed protein product [Mus musculus]
Length = 1001
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 151 ASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASC 207
A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA
Sbjct: 4 ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQV 63
Query: 208 VFMEMLVN-KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQ 261
+++++ + + ++P S L I+APR+GI+EVW + GPR+
Sbjct: 64 GWIQIVEDLHERVPEKGGFSPFGNTQGPSRVAQFLVIYAPRRGILEVWNTQQGPRVGAFN 123
Query: 262 CAKGSKILQPTYRF 275
K ++L P Y+
Sbjct: 124 VGKHCRLLYPGYKI 137
>gi|148681126|gb|EDL13073.1| mCG12392 [Mus musculus]
Length = 1357
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN- 215
L D R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ +
Sbjct: 349 LPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQVGWIQIVEDL 408
Query: 216 KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQ 270
+ ++P S L I+APR+GI+EVW + GPR+ K ++L
Sbjct: 409 HERVPEKGGFSPFGNTQGPSRVAQFLVIYAPRRGILEVWNTQQGPRVGAFNVGKHCRLLY 468
Query: 271 PTYRF 275
P Y+
Sbjct: 469 PGYKI 473
>gi|149040952|gb|EDL94909.1| rCG20240, isoform CRA_a [Rattus norvegicus]
Length = 1357
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 86/157 (54%), Gaps = 10/157 (6%)
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN- 215
L D R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ +
Sbjct: 349 LPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVEDL 408
Query: 216 KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQ 270
+ ++P S L I+APR+GI+EVW + GPR+ K ++L
Sbjct: 409 HERVPEKGDFSPFGNTQGPSRVAQFLVIYAPRRGILEVWSTQQGPRVGAFNVGKHCRLLY 468
Query: 271 PTYRFG--SSMASSPYVP--LEVFLLNGDSGQLSVLN 303
P Y+ +++ S + P ++ L++ S + V+N
Sbjct: 469 PGYKIMGLNNVTSQSWQPQTYQICLVDPVSASVKVVN 505
>gi|348677663|gb|EGZ17480.1| hypothetical protein PHYSODRAFT_504554 [Phytophthora sojae]
Length = 1419
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 12/112 (10%)
Query: 158 KDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD 217
+D R+ L LSP+G LAA++D+LGRILL+DT ++V+R+WKGYR+A C +M+
Sbjct: 341 EDDRRRCRVLVLSPTGRLAAVSDTLGRILLVDTSRMIVIRMWKGYRNAQCGWMQ------ 394
Query: 218 AATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL 269
+ A P L L I++ ++GI+EVW+ R GPR+ + +K+
Sbjct: 395 -GSEGARRPP-----GLYLVIYSAQRGIVEVWRARYGPRVFSFAVGNSAKLF 440
>gi|440897527|gb|ELR49190.1| Rab3 GTPase-activating protein non-catalytic subunit [Bos grunniens
mutus]
Length = 1334
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN- 215
L D R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ +
Sbjct: 361 LPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQTGWIQIVEDL 420
Query: 216 KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQ 270
+ ++P S L I+APR+GI+EVW + GPR+ K ++L
Sbjct: 421 HERVPEKGDFSPFGSPQGPSRVAQFLVIYAPRRGILEVWSTQQGPRVGAFNVGKYCRLLY 480
Query: 271 PTYRF 275
P Y+
Sbjct: 481 PGYKI 485
>gi|195160026|ref|XP_002020877.1| GL14134 [Drosophila persimilis]
gi|194117827|gb|EDW39870.1| GL14134 [Drosophila persimilis]
Length = 1351
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 30/247 (12%)
Query: 56 SKYGPCADAAITGLMPPPLME--VQSS--QRYFCAV-----------TIGEDSVISAFRL 100
+ G DAAI+ PP + VQ S Y+ V G + + F
Sbjct: 206 EREGIINDAAISSTQRPPTYDYIVQQSIGHGYYAKVHATPPRSSQVLAAGAEPYLGFFHA 265
Query: 101 SEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSF-ARASPLTC--- 156
E +G + V+ ++ + L + R+ P E P + +P+
Sbjct: 266 EEGYKTVSLGEVAKGVIGLAYNNL--LGGLFKRAPGPPPTPEDAPLPLPTKEAPMRIRCR 323
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 216
L D R G L ++P G LA +TD+L R++++DTQ +++R+WKGYRDA C F+ + K
Sbjct: 324 LYDGKRDGLTLAIAPGGRLAVVTDNLDRVMMVDTQQAIILRVWKGYRDAQCAFVPV---K 380
Query: 217 DAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFG 276
+ + K+ L L I+APR G +++W ++ GP++ +K +++ Y
Sbjct: 381 EKSVRGIKTHKRKA---LFLVIYAPRMGCLDIWALQNGPKVAAFTVSKSGQLI---YSNH 434
Query: 277 SSMASSP 283
S++ +P
Sbjct: 435 SALGVAP 441
>gi|195114558|ref|XP_002001834.1| GI14853 [Drosophila mojavensis]
gi|193912409|gb|EDW11276.1| GI14853 [Drosophila mojavensis]
Length = 1320
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 90 GEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRS-EQSPKKSE--PKPQ 146
G + + F E +G + V+ + I L + R+ +P+ E P P
Sbjct: 246 GAEPYLGFFEAEEGYKTVTLGEVAKDVIGMAYKNI--LGGLFRRTPATTPETPEQLPLPS 303
Query: 147 SFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDAS 206
A L D R G L L+P G LAA+TD+L R++L+DTQ +++R+WKGYRDA
Sbjct: 304 KEAPMRTRCRLYDGKRDGLTLILAPGGKLAAVTDNLDRVMLVDTQQTIILRVWKGYRDAQ 363
Query: 207 CVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGS 266
C F+ + S L L I+ PR G +++W ++ GP++ K
Sbjct: 364 CAFVPI------KERSVRGIKTHRRNALFLVIYVPRLGCLDIWALQNGPKVAAFNVCKSG 417
Query: 267 KIL----QPTYRFGSSMASSPYVPLEVFL 291
+++ P G M SP + +FL
Sbjct: 418 QLVYNNHSPLGAAGVQMRRSPNLNYCLFL 446
>gi|195443054|ref|XP_002069254.1| GK21099 [Drosophila willistoni]
gi|194165339|gb|EDW80240.1| GK21099 [Drosophila willistoni]
Length = 1348
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 89 IGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSE--PKPQ 146
IG + + F+ E +G + V+ + + L + R+ + P E P P
Sbjct: 257 IGAEPYLGFFQAEEGYKTVSIGEVAKDVIGMAYKNL--LGGLFRRAPEKPITPEENPLPV 314
Query: 147 SFARASPLT-C-LKDHPRKGERLTLSPS-GSLAAITDSLGRILLLDTQALVVVRLWKGYR 203
+ A T C L D R G L ++P G LAA+TD+L R++L+DTQ +++R+WKGYR
Sbjct: 315 PYKEAPMRTRCRLYDGKRDGISLVIAPGRGHLAAVTDNLDRVMLVDTQQSLILRVWKGYR 374
Query: 204 DASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCA 263
DA C F+++ S L L I+ PR G +++W ++ GP++
Sbjct: 375 DAQCGFVQV------KEKSVRGLKTHRRRALFLVIYVPRLGCLDIWALQNGPKVAAFNVC 428
Query: 264 KGSKILQPTYR-----FGSSMASSPYVPL-EVFLLNGDSGQL 299
K +++ + GS ++ P PL + L+ G L
Sbjct: 429 KSGQLIYVNHNPLTAVSGSGLSRKPQAPLNQCLFLDPSDGSL 470
>gi|322801998|gb|EFZ22535.1| hypothetical protein SINV_05735 [Solenopsis invicta]
Length = 1409
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 94/175 (53%), Gaps = 13/175 (7%)
Query: 112 ILSKVVPATFSTISSL--SKMIWRSEQSPKKSEPKPQSFARASPLTC---LKDHPRKGER 166
+LS V A S +++ + + W ++ K S +TC L D R+G+
Sbjct: 288 VLSDVAIAMASKLANAIGTAVPWFRGKNAMSEASKGISHESIETMTCRFGLSDIMREGDC 347
Query: 167 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML------VNKDAAT 220
+ SP+ + I+D++GR++LL+ + VR+WKGYRDA C ++E+ V+++
Sbjct: 348 IVSSPNKMFSVISDAMGRVILLNNKKGTAVRMWKGYRDAQCGWIEVTEERDRGVHRNVDK 407
Query: 221 SSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRF 275
S A ++ L L I+AP+KG+I++W ++ GP++ T +K ++L Y F
Sbjct: 408 KSGRKALFRT--ALFLVIYAPKKGVIDIWSIQQGPKITTFTASKNGRLLYINYGF 460
>gi|340709136|ref|XP_003393169.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Bombus terrestris]
Length = 1408
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 6/136 (4%)
Query: 144 KPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK 200
K + P+TC L D R+G + SP+ +L+ I D++GR+LL+D + + R+WK
Sbjct: 330 KTSTHEPVEPMTCRFGLSDVMREGYSIISSPNKALSVILDAMGRVLLIDNRYCIATRMWK 389
Query: 201 GYRDASCVFMEMLVNKDAA---TSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRL 257
GYRDA C ++E+ K + T + + + L I+AP+KG+I++W + GP++
Sbjct: 390 GYRDAQCGWIEVEEEKHSGMHKTFTKFKQTPQLRSAFFLVIYAPKKGVIDIWSTQQGPKI 449
Query: 258 LTIQCAKGSKILQPTY 273
T +K ++L Y
Sbjct: 450 TTFTASKHGRLLYINY 465
>gi|350413064|ref|XP_003489865.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Bombus impatiens]
Length = 1408
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Query: 144 KPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK 200
K + P+TC L D R+G + SP+ +L+ I D++GR+LL+D + + R+WK
Sbjct: 330 KTSTHEPVEPMTCRFGLSDVMREGYSIISSPNKALSVILDAMGRVLLVDNRYCIATRMWK 389
Query: 201 GYRDASCVFMEMLVNKDAATSSAYYAPVKS---DYCLCLAIHAPRKGIIEVWQMRTGPRL 257
GYRDA C ++E+ K + + ++ L I+AP+KG+I++W + GP++
Sbjct: 390 GYRDAQCGWIEVEEEKHSGMHKGFTKFKQTPQLRSAFFLVIYAPKKGVIDIWSTQQGPKI 449
Query: 258 LTIQCAKGSKILQPTY 273
T +K ++L Y
Sbjct: 450 TTFTASKHGRLLYINY 465
>gi|195035401|ref|XP_001989166.1| GH10197 [Drosophila grimshawi]
gi|193905166|gb|EDW04033.1| GH10197 [Drosophila grimshawi]
Length = 1336
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 98/190 (51%), Gaps = 17/190 (8%)
Query: 86 AVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKP 145
+ G + + F E +G + V+ + +L I+R ++P ++ +P
Sbjct: 247 VIVAGAEPYLGFFHAEEGYKTVSLGEVAKDVLGMAYK---NLMGGIFR--RAPDQAAEQP 301
Query: 146 QSF---ARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLW 199
+ ++ +P+ L D R G L L+P G LAA+TD+L R++L+DTQ +++R+W
Sbjct: 302 EQLPLPSKEAPMRTRCRLYDGKRDGLSLILAPGGKLAAVTDNLDRVMLVDTQQAIILRVW 361
Query: 200 KGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLT 259
KGYRDA C F+ K+ + K+ L L I+APR G +++W ++ GP++
Sbjct: 362 KGYRDAQCAFVP---TKERSVRGIKTHKRKA---LFLVIYAPRMGCLDIWALQNGPKVAA 415
Query: 260 IQCAKGSKIL 269
+K +++
Sbjct: 416 FTVSKCGQLI 425
>gi|195386636|ref|XP_002052010.1| GJ23995 [Drosophila virilis]
gi|194148467|gb|EDW64165.1| GJ23995 [Drosophila virilis]
Length = 1334
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 10/144 (6%)
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 216
L D R G L L+P LAA+TD+L R++L+DTQ +++R+WKGYRDA C FM + K
Sbjct: 319 LYDGKRDGLTLALAPGSKLAAVTDNLDRVMLVDTQQAIILRVWKGYRDAQCAFMPI---K 375
Query: 217 DAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL----QPT 272
+ + K+ L L I+APR G +++W ++ GP++ +K +++ P
Sbjct: 376 ERSVRGIKTHKRKA---LFLVIYAPRLGCLDIWALQNGPKVAAFNVSKSGQLVYNNHSPL 432
Query: 273 YRFGSSMASSPYVPLEVFLLNGDS 296
G M SP + +FL D+
Sbjct: 433 GAAGVQMRRSPNLNHCLFLDPSDA 456
>gi|320164262|gb|EFW41161.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1485
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM---L 213
+ D R+ + L PSG+LA TD GR++LLD +VR+WKGYRDA C ++E+ +
Sbjct: 270 ISDPRRRIASIQLDPSGTLAVTTDGFGRVMLLDVADATIVRMWKGYRDAQCGWIEVDEFI 329
Query: 214 VNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTY 273
+++ A ++ + L I+APR+G++EVW MR GPR+ +L Y
Sbjct: 330 ADEELVHGQQQRAACRASF---LCIYAPRRGLLEVWAMRYGPRVKAFNVGPHGTLLSAGY 386
Query: 274 R 274
+
Sbjct: 387 Q 387
>gi|194766005|ref|XP_001965115.1| GF23465 [Drosophila ananassae]
gi|190617725|gb|EDV33249.1| GF23465 [Drosophila ananassae]
Length = 1341
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 27/226 (11%)
Query: 63 DAAITGLMPPPLME--VQSS--QRYFCAV-----------TIGEDSVISAFRLSEDRSRS 107
DAAI+ PP + VQ S YF V G + + F+ E
Sbjct: 213 DAAISSTQRPPTYDYIVQQSIGHGYFAKVHATPPRSSQVLAAGAEPYLGFFQAEEGYKTM 272
Query: 108 LVGAILSKVVPATFSTISSLSKMIWRSEQ---SPKKSE-PKPQSFARASPLTCLKDHPRK 163
+ + V+ + + + + R+ + SP++S P P A L D R
Sbjct: 273 SIREVAKDVIGIAYKNL--MGGIFRRAPEPLPSPEESPMPMPTKEAPMRIHCRLYDGKRD 330
Query: 164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSA 223
G L ++P G LA +TD+L R++L+DTQ +++R+WKGYRDA C F+ + K+ +
Sbjct: 331 GLTLAVAPGGRLAVVTDNLDRVMLVDTQQAIILRVWKGYRDAQCAFVPV---KERSVRGI 387
Query: 224 YYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL 269
K+ L L I+APR G++++W ++ GP++ +K +++
Sbjct: 388 KTHKRKA---LFLVIYAPRLGVLDIWALQNGPKVAAFNVSKSGQLI 430
>gi|24583816|ref|NP_609544.2| rab3-GAP [Drosophila melanogaster]
gi|62511134|sp|Q9VKB9.2|RBGPR_DROME RecName: Full=Rab3 GTPase-activating protein regulatory subunit
gi|22946297|gb|AAF53156.2| rab3-GAP [Drosophila melanogaster]
gi|54650790|gb|AAV36974.1| LD40982p [Drosophila melanogaster]
Length = 1341
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 27/226 (11%)
Query: 63 DAAITGLMPPPLMEVQSSQR----YFCAV-----------TIGEDSVISAFRLSEDRSRS 107
DAAI+ PP + Q YF V G + + F+ E
Sbjct: 213 DAAISTTQRPPTYDYIVQQTIGLGYFAKVHATPPRSSQVLAAGAEPYLGFFQAEEGYKTM 272
Query: 108 LVGAILSKVVPATFSTISSLSKMIWRSEQ---SPKKSE-PKPQSFARASPLTCLKDHPRK 163
+G + V+ + + L + R+ + SP++S P P A L D R
Sbjct: 273 SLGEVAKDVIGIAYKNL--LGGIFRRAPEPLPSPEESPLPVPTKEAPMRIRCRLYDGKRD 330
Query: 164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSA 223
G L+++P G LA +TD+L R++L+DT +++R+WKGYRDA C F+ + K+ +
Sbjct: 331 GLTLSVAPGGRLAVVTDNLDRVMLVDTHQAIILRVWKGYRDAQCAFVPV---KEKSVRGI 387
Query: 224 YYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL 269
K+ L L I+APR G +++W ++ GP++ +K +++
Sbjct: 388 KTHKRKA---LFLVIYAPRMGCLDIWALQNGPKVAAFNVSKSGQLM 430
>gi|5052654|gb|AAD38657.1|AF145682_1 BcDNA.LD23336 [Drosophila melanogaster]
Length = 1239
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 27/226 (11%)
Query: 63 DAAITGLMPPPLMEVQSSQR----YFCAV-----------TIGEDSVISAFRLSEDRSRS 107
DAAI+ PP + Q YF V G + + F+ E
Sbjct: 111 DAAISTTQRPPTYDYIVQQTIGLGYFAKVHATPPRSSQVLAAGAEPYLGFFQAEEGYKTM 170
Query: 108 LVGAILSKVVPATFSTISSLSKMIWRSEQ---SPKKSE-PKPQSFARASPLTCLKDHPRK 163
+G + V+ + + L + R+ + SP++S P P A L D R
Sbjct: 171 SLGEVAKDVIGIAYKNL--LGGIFRRAPEPLPSPEESPLPVPTKEAPMRIRCRLYDGKRD 228
Query: 164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSA 223
G L+++P G LA +TD+L R++L+DT +++R+WKGYRDA C F+ + K+ +
Sbjct: 229 GLTLSVAPGGRLAVVTDNLDRVMLVDTHQAIILRVWKGYRDAQCAFVPV---KEKSVRGI 285
Query: 224 YYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL 269
K+ L L I+APR G +++W ++ GP++ +K +++
Sbjct: 286 KTHKRKA---LFLVIYAPRMGCLDIWALQNGPKVAAFNVSKSGQLM 328
>gi|170580370|ref|XP_001895234.1| hypothetical protein Bm1_18885 [Brugia malayi]
gi|158597919|gb|EDP35936.1| hypothetical protein Bm1_18885 [Brugia malayi]
Length = 1100
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 159 DHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD 217
D R+GER+ ++P LAA+TDSL R+ L+D + +VR+WKGYRDA C ++E + D
Sbjct: 397 DGKREGERIYMAPGKYKLAAVTDSLARVALIDIRTRHMVRMWKGYRDARCAWLEGMSTLD 456
Query: 218 AATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQ----PTY 273
S Y V+ L L I APR+G++E W M+ G R+ + +++ +
Sbjct: 457 RKKSR-YELEVQPSTTLFLVIFAPRRGLLEAWSMQNGRRVFASTVDRHGRLIGIPRLSDH 515
Query: 274 RFGSSMASSPYVPLEVFLL--NGDSGQLSV-LNRSLS 307
G +S ++P VF L NG L + +R+LS
Sbjct: 516 LLGFDERASSHLP-SVFFLSSNGMIYHLRIPFHRALS 551
>gi|194861383|ref|XP_001969771.1| GG10277 [Drosophila erecta]
gi|190661638|gb|EDV58830.1| GG10277 [Drosophila erecta]
Length = 1341
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 63 DAAITGLMPPPLMEVQSSQR----YFCAV-----------TIGEDSVISAFRLSEDRSRS 107
DAAI+ PP + Q YF V G + + F E
Sbjct: 213 DAAISTTQRPPTYDYIVQQSIGLGYFAKVHATPPRSSQVLAAGAEPYLGFFHAEEGYKTM 272
Query: 108 LVGAILSKVVPATFSTISSLSKMIWRSEQ---SPKKSE-PKPQSFARASPLTCLKDHPRK 163
+G + V+ + + L + R+ + SP++S P P A L D R
Sbjct: 273 SLGEVAKDVIGIAYKNL--LGGIFRRAPEPLPSPEESPLPVPTKEAPMRIRCRLYDGKRD 330
Query: 164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSA 223
G L ++P G LA +TD+L R++L+DT +++R+WKGYRDA C F+ + K+ +
Sbjct: 331 GLTLAVAPGGRLAFVTDNLDRVMLVDTHQAIILRVWKGYRDAQCAFVPV---KEKSVRGI 387
Query: 224 YYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL 269
KS L L I+APR G +++W ++ GP++ +K +++
Sbjct: 388 KTHKRKS---LFLVIYAPRMGCLDIWALQNGPKVAAFNVSKSGQLI 430
>gi|195472301|ref|XP_002088439.1| GE12457 [Drosophila yakuba]
gi|194174540|gb|EDW88151.1| GE12457 [Drosophila yakuba]
Length = 1341
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 63 DAAITGLMPPPLMEVQSSQR----YFCAV-----------TIGEDSVISAFRLSEDRSRS 107
DAAI+ PP + Q YF V G + + F+ E
Sbjct: 213 DAAISTTQRPPTYDYIVQQSIGLGYFAKVHATPPRSSQVLAAGAEPYLGFFQAEEGYKTM 272
Query: 108 LVGAILSKVVPATFSTISSLSKMIWRSEQ---SPKKSE-PKPQSFARASPLTCLKDHPRK 163
+G + V+ + + L + R+ + SP++S P P A L D R
Sbjct: 273 SLGEVAKDVIGIAYKNL--LGGIFRRAPEPLPSPEESPLPVPTKEAPMRIRCRLYDGKRD 330
Query: 164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSA 223
G L ++P G LA +TD+L R++L+DT +++R+WKGYRDA C F+ + K+ +
Sbjct: 331 GLTLAVAPGGRLAVVTDNLDRVMLVDTHQAIILRVWKGYRDAQCAFVPV---KEKSVRGI 387
Query: 224 YYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL 269
K+ L L I+APR G +++W ++ GP++ +K +++
Sbjct: 388 KTHKRKA---LFLVIYAPRMGCLDIWALQNGPKVAAFNVSKSGQLI 430
>gi|195578667|ref|XP_002079185.1| GD22135 [Drosophila simulans]
gi|194191194|gb|EDX04770.1| GD22135 [Drosophila simulans]
Length = 1339
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 63 DAAITGLMPPPLMEVQSSQR----YFCAV-----------TIGEDSVISAFRLSEDRSRS 107
DAAI+ PP + Q YF V G + + F+ E
Sbjct: 213 DAAISTTQRPPTYDYIVQQSIGLGYFAKVHATPPRSSHVLAAGAEPYLGFFQAEEGYKTM 272
Query: 108 LVGAILSKVVPATFSTISSLSKMIWRSEQ---SPKKSE-PKPQSFARASPLTCLKDHPRK 163
+G + V+ + + L + R+ + SP++S P P A L D R
Sbjct: 273 SLGEVAKDVIGIAYKNL--LGGIFRRAPEPLPSPEESPLPVPTKEAPMRIRCRLYDGKRD 330
Query: 164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSA 223
G L ++P G LA +TD+L R++L+DT +++R+WKGYRDA C F+ + K+ +
Sbjct: 331 GLTLAVAPGGRLAVVTDNLDRVMLVDTHQAIILRVWKGYRDAQCAFVPV---KEKSVRGI 387
Query: 224 YYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL 269
K+ L L I+APR G +++W ++ GP++ +K +++
Sbjct: 388 KTHKRKA---LFLVIYAPRMGCLDIWALQNGPKVAAFNVSKSGQLI 430
>gi|393907320|gb|EJD74601.1| hypothetical protein LOAG_18108 [Loa loa]
Length = 1299
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 86/157 (54%), Gaps = 10/157 (6%)
Query: 159 DHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD 217
D R+GER+ ++P+ LAA+TDSL R+ L+D + +VR+WKGYRDA C ++E + D
Sbjct: 347 DGKREGERIYMAPAKYKLAAVTDSLARVALIDIRTRHMVRMWKGYRDARCAWLEGVSTLD 406
Query: 218 AATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQ----PTY 273
S Y V+ L L I APR+G++E W M+ G R+ + +++ +
Sbjct: 407 RKKSR-YELEVQPSTALFLIIFAPRRGLLEAWSMQNGRRVFASTVDRHGRLIGIPRLSDH 465
Query: 274 RFGSSMASSPYVPLEVFLL--NGDSGQLSV-LNRSLS 307
G ++ ++P VF L NG L + +R+LS
Sbjct: 466 LLGCDERAASHLP-SVFFLSSNGTIHHLWIPFHRALS 501
>gi|312375310|gb|EFR22708.1| hypothetical protein AND_14323 [Anopheles darlingi]
Length = 1394
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 75/130 (57%), Gaps = 7/130 (5%)
Query: 151 ASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASC 207
+ PL C L D R + L+P+ LAA+ D+LGRI+L+D Q + +R+WKGYRDA C
Sbjct: 311 SEPLICRFGLCDLQRNAFAVWLAPNYQLAAVADNLGRIILVDCQRGIALRIWKGYRDAQC 370
Query: 208 VFMEM---LVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRT-GPRLLTIQCA 263
F+E+ L + + + V L L I+APR+ ++EVW +R+ GP++ A
Sbjct: 371 GFVEVPEKLPKESSTATGGSSRKVDRRRALFLIIYAPRRSVLEVWSLRSGGPKVAAFSAA 430
Query: 264 KGSKILQPTY 273
K +++ T+
Sbjct: 431 KNGQLMYNTH 440
>gi|347966108|ref|XP_551287.4| AGAP001533-PA [Anopheles gambiae str. PEST]
gi|333470207|gb|EAL38577.4| AGAP001533-PA [Anopheles gambiae str. PEST]
Length = 1374
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 93/170 (54%), Gaps = 11/170 (6%)
Query: 112 ILSKVVPATFSTI-SSLSKMIWRSEQSPKKSEPKPQSFARASPLTC---LKDHPRKGERL 167
+L+ V A S I S+L + +++ +PQ + PL C L D R +
Sbjct: 270 VLADVARAVASKIKSALPSWLGGGASVQQQTAAEPQ-LPPSEPLICRFGLCDLQRNAFAV 328
Query: 168 TLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAP 227
L+P+ LAA+ D+LGR++L+D Q + +R+WKGYRDA C F+E+ +SSA AP
Sbjct: 329 WLAPNYQLAAVADNLGRVILVDCQRGIALRIWKGYRDAQCGFVEVAEKLPKESSSA--AP 386
Query: 228 ---VKSDYCLCLAIHAPRKGIIEVWQMRT-GPRLLTIQCAKGSKILQPTY 273
+ L L I+APR+ ++E+W +R GP++ AK +++ T+
Sbjct: 387 GRKMDRRKALFLVIYAPRRSVLEIWSLRAGGPKVAAFSAAKNGQLIYNTH 436
>gi|345495398|ref|XP_001601828.2| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Nasonia vitripennis]
Length = 1423
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 97/179 (54%), Gaps = 17/179 (9%)
Query: 112 ILSKVVPATFSTISSL--SKMIW-RSEQSPKKSEPKPQSFARASP---LTC---LKDHPR 162
+LS V A S ++S + + W R+ S + P+ P +TC L D R
Sbjct: 291 VLSDVAIAMASKVASAIGAAVPWFRTSSSKTPATPEKAKGVMTEPAETMTCRFGLSDALR 350
Query: 163 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAAT-- 220
+G+ + +SP+ L+ + D++GR++L+D + + +R+WKGYRDA C ++E + + A+
Sbjct: 351 EGDCIVVSPNKLLSVVCDAMGRVILIDNKQGIAIRMWKGYRDAQCGWIEAIEERHRASIK 410
Query: 221 ------SSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTY 273
SS+ + + L L ++AP+KG+I++W ++ G ++ T +K ++L Y
Sbjct: 411 GHHSKTSSSSTSHAQRRTALFLVVYAPKKGVIDIWSIQYGTKITTFSASKNGRLLYTNY 469
>gi|195350987|ref|XP_002042018.1| GM26362 [Drosophila sechellia]
gi|194123842|gb|EDW45885.1| GM26362 [Drosophila sechellia]
Length = 1339
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 63 DAAITGLMPPPLMEVQSSQR----YFCAV-----------TIGEDSVISAFRLSEDRSRS 107
DAAI+ PP + Q YF V G + + F+ E
Sbjct: 213 DAAISTTQRPPTYDYIVQQSIGLGYFAKVHATPPRSSHVLAAGAEPYLGFFQAEEGYKTM 272
Query: 108 LVGAILSKVVPATFSTISSLSKMIWRSEQ---SPKKSE-PKPQSFARASPLTCLKDHPRK 163
+G + V+ + + L + R+ + SP++S P P A L D R
Sbjct: 273 SLGEVAKDVIGIAYKNL--LGGIFRRAPEPLPSPEESLLPVPTKEAPMRIRCRLYDGKRD 330
Query: 164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSA 223
G L ++P G LA +TD+L R++L+DT +++R+WKGYRDA C F+ + K+ +
Sbjct: 331 GLTLAVAPGGRLAVVTDNLDRVMLVDTHQAIILRVWKGYRDAQCAFVPV---KEKSVRGI 387
Query: 224 YYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL 269
K+ L L I+APR G +++W ++ GP++ +K +++
Sbjct: 388 KTHKRKA---LFLVIYAPRMGCLDIWALQNGPKVAAFNVSKSGQLI 430
>gi|291225161|ref|XP_002732569.1| PREDICTED: rCG20240-like, partial [Saccoglossus kowalevskii]
Length = 459
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN- 215
L D R G+ +TLSPS +LA TDS GR++L+D +R+WKGYRDA C ++++L +
Sbjct: 345 LPDLRRHGDSITLSPSRTLAVTTDSFGRVILIDVNRGHALRMWKGYRDAQCGWIQVLEDV 404
Query: 216 ---KDAATSSAYYAPVKSD-YCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAK 264
DA + + L L I+APR+GI+EVW + GPR+ +K
Sbjct: 405 SDKVDAGLKRRHRGKSYTGRVALFLVIYAPRRGIVEVWNTQQGPRVAAFNVSK 457
>gi|301095868|ref|XP_002897033.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108462|gb|EEY66514.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1417
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 15/120 (12%)
Query: 158 KDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD 217
+D R+ L LSP+G LAA++D+LGRILL+DT ++V+R+WKGYR+A +M+
Sbjct: 337 EDERRRCRVLVLSPTGRLAAVSDTLGRILLVDTARMLVIRMWKGYRNAQVGWMQ------ 390
Query: 218 AATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTI---QCAKGSKILQPTYR 274
+ A P L L I++ ++GI+EVW+ R GPR+ + CAK P R
Sbjct: 391 -GSDGARRPP-----GLYLVIYSAQRGIVEVWRARYGPRVFSFAVGNCAKLFTQFDPVTR 444
>gi|332017708|gb|EGI58384.1| Rab3 GTPase-activating protein non-catalytic subunit [Acromyrmex
echinatior]
Length = 1362
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 82/141 (58%), Gaps = 11/141 (7%)
Query: 144 KPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK 200
K S +TC L D R+G+ + SP+ + I+D++GR++L++ + + +R+WK
Sbjct: 324 KSISHESVETMTCRFGLSDIMREGDCIVCSPNKMFSIISDAMGRVILINNKKGIALRMWK 383
Query: 201 GYRDASCVFMEMLVNKDAAT-----SSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGP 255
GYR+A C ++E+ +D A S A +++ L L I+AP+KG+I++W ++ GP
Sbjct: 384 GYRNAQCGWIEVTEERDRAIRRNVDKSGRKALLRT--ALFLVIYAPKKGVIDIWSIQQGP 441
Query: 256 RLLTIQCAK-GSKILQPTYRF 275
++ T +K G ++L Y F
Sbjct: 442 KITTFTASKNGRQLLYINYGF 462
>gi|402582876|gb|EJW76821.1| hypothetical protein WUBG_12270, partial [Wuchereria bancrofti]
Length = 369
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 159 DHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD 217
D R+GER+ ++P LAA+TDSL R+ L+D + +VR+WKGYRDA C ++E + D
Sbjct: 47 DGKREGERIYMAPGKYKLAAVTDSLARVALIDIRTRHMVRMWKGYRDARCAWLEGMSTLD 106
Query: 218 AATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL 269
S Y V+ L L I APR+G++E W M+ G R+ + +++
Sbjct: 107 RK-KSRYELEVQPSTTLFLVIFAPRRGLLEAWSMQNGRRVFASTVDRHGRLI 157
>gi|355714932|gb|AES05166.1| RAB3 GTPase activating protein subunit 2 [Mustela putorius furo]
Length = 379
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
Query: 167 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDAATSSAYY 225
+ LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + + A
Sbjct: 2 ICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIIEDLHERVPEKADL 61
Query: 226 APVK-----SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRF 275
+P S L I+APR+GI+EVW + GPR+ K ++L P Y+
Sbjct: 62 SPFGNTQGPSRVAQFLVIYAPRRGILEVWSTQQGPRVGAFNVGKHCRLLYPGYKI 116
>gi|219112551|ref|XP_002178027.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410912|gb|EEC50841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1468
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 11/113 (9%)
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 216
L D PR+ E L P G+LAA+ D+LGRI++LD VVR+WKG+R+A+C +++ +
Sbjct: 500 LHDAPRRIEFCALDPKGNLAALADTLGRIIVLDLTTKQVVRVWKGFREATCHWIQAPRAE 559
Query: 217 DAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL 269
D Y LAIH+ ++ +EVW +R G ++ ++Q + + IL
Sbjct: 560 DPGKCRLY-----------LAIHSRQRHALEVWPIRQGGKVFSMQVGRDAHIL 601
>gi|326434518|gb|EGD80088.1| hypothetical protein PTSG_13029 [Salpingoeca sp. ATCC 50818]
Length = 1830
Score = 81.6 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 21/193 (10%)
Query: 93 SVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSP--KKSEPKPQSFAR 150
S + A R++ + S+++V + S ++ S+ SS S ++ Q+ + P P +F+
Sbjct: 193 SAVGAGRVATNFSKAVVSMVSSFWGSSSSSSSSSSSSSRSQAPQTALLQPGTPLPMAFS- 251
Query: 151 ASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFM 210
L D R+ E L LSP+G+LAA TD+LGR+LL++T+ +VVR+WKGYRDA C ++
Sbjct: 252 ------LSDPRREIEWLALSPNGALAAATDTLGRVLLINTRLSIVVRVWKGYRDARCYWV 305
Query: 211 EMLVNK-----------DAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLT 259
K D S L IHA R+G++EVW + G R
Sbjct: 306 TTDAPKPQDMQAGTATNDTRGSGGGANGGGGGGAHQLCIHARRRGLLEVWNVPLGSRAAA 365
Query: 260 IQCAKGSKILQPT 272
G+ +L PT
Sbjct: 366 FNIGVGALVL-PT 377
>gi|325183534|emb|CCA17995.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 1670
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 16/114 (14%)
Query: 151 ASPL----TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDAS 206
A+PL T +D R+ L +SP G +AA+ DSLGR++L+DT ++++R+WKGYR+A
Sbjct: 586 AAPLKAIATFTEDSRRRCRMLIVSPCGRVAALADSLGRVMLVDTWRMIIIRMWKGYRNAQ 645
Query: 207 CVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTI 260
C + D T Y LAI++ ++G I+VW+ R GPR+ +I
Sbjct: 646 CGWFHGY-EGDERTRGLY-----------LAIYSEQRGTIDVWRARYGPRVASI 687
>gi|358341236|dbj|GAA48966.1| Rab3 GTPase-activating protein non-catalytic subunit [Clonorchis
sinensis]
Length = 1171
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 167 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLV-NKDAATSSAYY 225
+ +S A+TDSLGR+LL+D VVR+WKGYRDA F++ L D S
Sbjct: 1 MAISSDQQWIAVTDSLGRVLLVDLNKRRVVRMWKGYRDAELAFVDTLERTSDPGIDSVAR 60
Query: 226 APVKSDYCL-CLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQ 270
P+ CL IHAP + I+EVW++ GPRL T + +++Q
Sbjct: 61 KPISHPRTTRCLFIHAPHRRILEVWRLTHGPRLATWDVEEPVRLIQ 106
>gi|241997640|ref|XP_002433469.1| hypothetical protein IscW_ISCW000719 [Ixodes scapularis]
gi|215490892|gb|EEC00533.1| hypothetical protein IscW_ISCW000719 [Ixodes scapularis]
Length = 971
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 216
+ D R G R+ LSP+ LA ITDS+GRI L D +R+WKGYRDA C ++E V
Sbjct: 174 IYDKHRWGARICLSPNKRLAVITDSVGRITLFDVFHGNALRIWKGYRDADCGWVE--VED 231
Query: 217 DAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTY 273
+ + P K+ + L ++APR G++E+W R+ + KG +++ Y
Sbjct: 232 SSPDTKVNGVPRKTQF---LVVYAPRWGLVEIWCPHQTSRVAAFEVGKGGRLVCNNY 285
>gi|224000055|ref|XP_002289700.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974908|gb|EED93237.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 2068
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 14/108 (12%)
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM---- 212
D PR+ E+ T+ PSG+ A TD+LGR+LL+D + +R+WKG R+ SC F E+
Sbjct: 685 FSDAPRRFEKATVDPSGTYVATTDNLGRVLLIDLETKQPIRMWKGMRNVSCYFAELPCLS 744
Query: 213 LVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTI 260
L K + + Y L IH ++G +EV+++R GPR+ +
Sbjct: 745 LGGKTTSIGTRLY----------LVIHMRQRGSVEVYRLRQGPRVAAV 782
>gi|357618932|gb|EHJ71716.1| hypothetical protein KGM_15744 [Danaus plexippus]
Length = 1325
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 134 SEQSPKKSEP--KPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQ 191
+E +P SEP K +S + + + D R G +++SP LAA TDSLGR+ +LD
Sbjct: 295 TETAPMNSEPLIKAESLSMRNGIY---DSQRSGTFVSISPDRRLAAFTDSLGRVSVLDIS 351
Query: 192 ALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKS-DYCLCLAIHAPRKGIIEVWQ 250
++RL+KG RDA C F+++ DA + VK + L I+ P+KG+I++
Sbjct: 352 KGYIIRLFKGCRDAQCAFIQIF---DADNKKPQLSVVKEIRRAMFLIIYNPKKGLIDIRL 408
Query: 251 MRTGPRLLTIQCAKGSKILQPT 272
M+ G R+ K K+L T
Sbjct: 409 MQRGSRVAVFTATKNGKLLYNT 430
>gi|405972679|gb|EKC37435.1| Rab3 GTPase-activating protein non-catalytic subunit [Crassostrea
gigas]
Length = 796
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 24/210 (11%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQ 146
+T G + F E S+ ++ + V S I S + W S K E K +
Sbjct: 314 ITSGVGPYVGFFYAVEGSSQPILSDVAYAVAHKLKSAIMSAASG-WLGFGSKHKEEEKQR 372
Query: 147 -SFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
A+P+ L D R G+ + LSP+ S A TDS GR++L+D + VR+WKGY
Sbjct: 373 PKIEPATPIPMRFGLPDKRRLGDSIYLSPNNSYVATTDSFGRVILVDVERGTAVRMWKGY 432
Query: 203 RDASCVFMEM--LVNKDAATSSAYYAPV-----------------KSDYCLCLAIHAPRK 243
RDA ++++ V+ S A + K L I+APR+
Sbjct: 433 RDAQLGWVQVKEYVHHGGEDGSYRDAQLGWVQVKEYVHHGGEDGSKERIAQFLIIYAPRR 492
Query: 244 GIIEVWQMRTGPRLLTIQCAKGSKILQPTY 273
GI+E W +GPR+ K +++ P Y
Sbjct: 493 GILEAWTAASGPRVAAFNVPKHCRLISPGY 522
>gi|242022172|ref|XP_002431515.1| Rab3 GTPase-activating protein regulatory subunit, putative
[Pediculus humanus corporis]
gi|212516809|gb|EEB18777.1| Rab3 GTPase-activating protein regulatory subunit, putative
[Pediculus humanus corporis]
Length = 1309
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 11/190 (5%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISS-LSKMIWRSEQSPKKSEPKP 145
VT G+ I E S ++ + V S++++ L + P + K
Sbjct: 270 VTTGKKPFIGFHYTVESASSPILADVALAVANKIKSSVTANLPNWFGFGNKKPVSDKSKE 329
Query: 146 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
+ L C L D R+G+ + LSP G A++DSLGR++L++ + +RLWKG+
Sbjct: 330 IIYENGEQLNCRFGLCDIWREGQSIILSPDGVYCAVSDSLGRVILVENCTGLALRLWKGF 389
Query: 203 RDASCVFMEMLVNKDAATSSAYYAPVKSDY---CLCLAIHAPRKGIIEVWQMRTGPRLLT 259
RDA C F +LV +D + V + L + ++AP+KG+IE++ + G R+ +
Sbjct: 390 RDAQCGF--LLVQED--VKKIKHKKVSESHRRQALFIVLYAPKKGLIEIFNTQNGQRVTS 445
Query: 260 IQCAKGSKIL 269
+ K +++
Sbjct: 446 FKVTKFGRLI 455
>gi|321478928|gb|EFX89884.1| hypothetical protein DAPPUDRAFT_299991 [Daphnia pulex]
Length = 1324
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 111 AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLT------CLKDHPRKG 164
A+ SKV FS S + + + PKP+ A P T L D R+
Sbjct: 317 ALASKVTSKIFSKTSGWLGWGGGAADT---APPKPKDKQVAEPATPVYPRYGLADSLREA 373
Query: 165 ERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML--VNKDAATSS 222
++ SP+ AA+TDSLGR++L+D V VR+WKGYRDA C ++ V + +++S
Sbjct: 374 LSISASPNERFAAVTDSLGRVILIDLPRGVAVRMWKGYRDAQCGWITAWEEVGQLSSSSC 433
Query: 223 AYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSK 267
+ L I+ ++GI+E+W + G R+ +KG+K
Sbjct: 434 SERETTIPRTVSFLVIYITKRGIVEIWTPQQGTRVAAFNYSKGAK 478
>gi|167515826|ref|XP_001742254.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778878|gb|EDQ92492.1| predicted protein [Monosiga brevicollis MX1]
Length = 1314
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 78 QSSQRYFCA-VTIGEDSVISAFR-LSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSE 135
+ + CA + G +++ + L DR S V A+ + + + S+ W
Sbjct: 264 HAEHQEMCAYIVAGASPMLAKYTTLGVDRPFSTVAALATSMATQFSKAMFSMVNSFWGGS 323
Query: 136 QSPKKSEPK------------PQSFARASPL---TCLKDHPRKGERLTLSPSGSLAAITD 180
+ KS+ K P + A+PL + L D R+ RL+LSP L A D
Sbjct: 324 STAAKSQSKAPAESSDPSEVPPSAREPATPLPMASSLSDAKREFLRLSLSPDQRLLAAAD 383
Query: 181 SLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA 240
+LGR+ LLD L VR+WKGYRDA + K+ A A A + L I+A
Sbjct: 384 NLGRVFLLDVATLSAVRMWKGYRDAEVAWHVSEPMKERAGPMALRA-------MFLIIYA 436
Query: 241 PRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSS 278
PR+G +E+W + G R G + T+ SS
Sbjct: 437 PRRGQVELWNVPFGDRAAAFNIGVGQIPPRQTWVLDSS 474
>gi|324500483|gb|ADY40228.1| Rab3 GTPase-activating protein regulatory subunit [Ascaris suum]
Length = 1354
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 125 SSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGERLT-LSPSGSLAAITDSLG 183
S L + R +++P P +S + + L D R+GER+ S +L A+TDS+
Sbjct: 364 SYLGIGVSRKDRTPTAPIPANKSSINLATRSVLLDGGREGERIFPSSREFNLFAVTDSIA 423
Query: 184 RILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVK------SDYCLCLA 237
R++L++ + + R+WKGYRDA C ++E SS+ + VK L L
Sbjct: 424 RVVLIEAASRQITRMWKGYRDARCAWIE--------ASSSIESEVKLSKGKTQATALFLV 475
Query: 238 IHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL 269
I APR+G++EVW M+ G R+ + + +++
Sbjct: 476 IFAPRRGLLEVWSMQNGRRVSAVNVDRRGRLV 507
>gi|299473174|emb|CBN78750.1| Rab3 GTPase-activating protein, non-catalytic subunit, distant
homolog [Ectocarpus siliculosus]
Length = 1632
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 28/138 (20%)
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 216
L+D R+ RL L PSG LAA D GR++L+D ++R+WKG RDA C ++E++ +
Sbjct: 264 LQDGWRRVSRLFLGPSGRLAAAADGFGRVMLVDCATRQILRMWKGVRDAECGWLEVVESW 323
Query: 217 DA-------------------------ATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQM 251
+ S A PV Y LAI AP +G +E+W+M
Sbjct: 324 EGRRVESVGRKGRFAATAAAAAPAQQPGESVAATTPVVGLY---LAILAPLRGRVELWRM 380
Query: 252 RTGPRLLTIQCAKGSKIL 269
R GP + I G+++L
Sbjct: 381 RHGPCVRVISAPAGARLL 398
>gi|328770113|gb|EGF80155.1| hypothetical protein BATDEDRAFT_88568 [Batrachochytrium
dendrobatidis JAM81]
Length = 1091
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 33/231 (14%)
Query: 56 SKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAIL-S 114
S + P +TG P V + RY + +G+ V A + + SRSL I+ S
Sbjct: 178 SVFSPPQFNKLTGEYAP----VNYTARY---IAVGKPMV--ALYATTETSRSLFAGIVPS 228
Query: 115 KVVPATFSTISSLSKMIWRSEQSP-----KKSEPKPQSF--ARASPLTCLKDHPRKGERL 167
+V A S + S +K +W S P + EP + + L D R +
Sbjct: 229 RVTSAVTSAVFSFAKTLWNSPNQPSSVANQSKEPSLTTTPGVVVPAVIVLSDSNRHILSI 288
Query: 168 TLSPSG------SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATS 221
T +PS SLA ++DSLGR+L+LDT ++R++KG RDA ++++
Sbjct: 289 TQAPSSVTTPRSSLAVMSDSLGRVLVLDTDEGEIIRIFKGVRDAQTAWIQV--------- 339
Query: 222 SAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPT 272
S + L LAI++ R G++E++ MR G R+ G +++Q T
Sbjct: 340 SDQSGRIDRPVLLVLAIYSSR-GVLELYLMRFGQRICIANVGTGIRLVQTT 389
>gi|290989319|ref|XP_002677285.1| predicted protein [Naegleria gruberi]
gi|284090892|gb|EFC44541.1| predicted protein [Naegleria gruberi]
Length = 374
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 124/285 (43%), Gaps = 22/285 (7%)
Query: 34 KQRDSEDLENSYERLPHQLWNVSKYGPCADAA--ITGLMPPPLMEVQSSQRYFCAVTIGE 91
K+ +SE+ + L ++ WN+ ++ DA + + EV + F V +G+
Sbjct: 70 KELNSENPSMDLDDLEYKKWNLQEFAKLNDACCLYSHCSDSSIFEVMEEKSEFDIVAVGK 129
Query: 92 DSVISAFRLSED-----RSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQ 146
S ++ + + + R R+ V I ++V +S S+ S +W + ++ +
Sbjct: 130 -STLALYSTANEIVEYVRKRTRVKKIATQVASKVYSLASNYSSWLWGGNKEVEQPSEPEE 188
Query: 147 SFARAS---PLTC-LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 202
P++ D R+ L +G A +DSLGRIL+ D + V++++KGY
Sbjct: 189 PEILPGTRIPISNRFIDEKREIFHADLDYTGKYLATSDSLGRILIFDLSTMTVMKVFKGY 248
Query: 203 RDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQC 262
R+A C + + S + L I APR+GI+E W + G RL +
Sbjct: 249 REAHCYWFFTGSEPENMNSESNIE--------LLLIFAPRRGILECWTI-DGRRLYALTV 299
Query: 263 AKGSKILQPTYRFGSSMASSPYVPLEVFLLNGDSGQLSVLNRSLS 307
+ ++ + F ++ + P + +L++ G + + +S
Sbjct: 300 GTDKRFIKASGNFIEGKETT-FHPSQFYLISQTDGSIQQVEFDIS 343
>gi|328870099|gb|EGG18474.1| hypothetical protein DFA_03968 [Dictyostelium fasciculatum]
Length = 653
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 47/230 (20%)
Query: 87 VTIGEDSVISAFRLSED--RSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPK 144
V +G+D ++S + S+D S S+ A++S V + + S +K W ++ + +
Sbjct: 357 VAVGKDPIVSFYYPSDDGGTSFSVAVALVSSVAAKLTNAVYSFAKNWWGGGGQQQQQQQQ 416
Query: 145 -----------PQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDT 190
Q PL+ + D R+ + + L PSG AA TD+LGR+LL+D
Sbjct: 417 SQQQQQSQQQQDQKIENPLPLSIRWSIMDEKRELQSIILDPSGRYAATTDNLGRVLLIDV 476
Query: 191 QALVVVRLWKGYRDASCVFMEMLVNK----------------------DAATSSAYYAPV 228
V++++WKGYRD C +++ + N D T P
Sbjct: 477 INSVIIKVWKGYRDCQCAWIQSINNNNNNNNNNNNEQSDQESMDQESLDTQTLEDLVPPK 536
Query: 229 ---------KSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL 269
+ Y LAI+ R+G +EVW+M+ R+L + G +++
Sbjct: 537 LLRSAASKRQITYHTYLAIYIGRRGYLEVWEMKHKKRVLFQKVGLGCRLV 586
>gi|256073203|ref|XP_002572921.1| hypothetical protein [Schistosoma mansoni]
gi|350645691|emb|CCD59666.1| hypothetical protein Smp_130000 [Schistosoma mansoni]
Length = 1488
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 8/108 (7%)
Query: 167 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYA 226
+ +SP AI DSLGR+LL+D VVR+WKGYRDA F+E+ D+ T Y
Sbjct: 328 VAISPDHHWLAIPDSLGRVLLVDACRERVVRMWKGYRDAEVAFLEVC---DSETPYIGYR 384
Query: 227 PVKSDY----CLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQ 270
K +Y LCL IHAP +E+W + GPR+++ + +++Q
Sbjct: 385 N-KPNYSVRKTLCLLIHAPHLHSLELWCLIHGPRIVSWDVVEPVRLIQ 431
>gi|270013878|gb|EFA10326.1| hypothetical protein TcasGA2_TC012543 [Tribolium castaneum]
Length = 1281
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 216
L D R + LSP LAA++D+LGR++L+D V +R++KGYR+A C F+++ +
Sbjct: 329 LCDLRRISTNIVLSPDHKLAAVSDALGRVILMDAFRGVTLRIFKGYREAQCSFIQVPDER 388
Query: 217 DAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTY 273
+ + + L L I++ +KG +E++ ++ G ++ T +K S+++ Y
Sbjct: 389 HSKHR------IGNKVALFLVIYSSKKGTVEIFTVQQGQKICTFSASKFSRLVYNNY 439
>gi|91090530|ref|XP_970468.1| PREDICTED: similar to Rab3 GTPase-activating protein non-catalytic
subunit (Rab3 GTPase-activating protein 150 kDa subunit)
(Rab3-GAP p150) (Rab3-GAP regulatory subunit)
(RAB3-GAP150) [Tribolium castaneum]
Length = 1273
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 216
L D R + LSP LAA++D+LGR++L+D V +R++KGYR+A C F+++ +
Sbjct: 321 LCDLRRISTNIVLSPDHKLAAVSDALGRVILMDAFRGVTLRIFKGYREAQCSFIQVPDER 380
Query: 217 DAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTY 273
+ + + L L I++ +KG +E++ ++ G ++ T +K S+++ Y
Sbjct: 381 HSKHR------IGNKVALFLVIYSSKKGTVEIFTVQQGQKICTFSASKFSRLVYNNY 431
>gi|281210020|gb|EFA84188.1| hypothetical protein PPL_03263 [Polysphondylium pallidum PN500]
Length = 602
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 108/258 (41%), Gaps = 64/258 (24%)
Query: 87 VTIGEDSVISAFRLSEDRSRSLVGAI--LSKVVPATFSTISSLSKMIW------------ 132
+ G D +++ + S+D S A+ +S V + + S +K W
Sbjct: 325 IVAGSDPMLAYYYPSDDSGSSFTVAVALVSSVAAKLTNAVYSFAKNWWGGSQQSQQQQQQ 384
Query: 133 -RSEQSPKKSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLL 188
+ E + K+ E K ++ SPL L D R+ + L + PSG A TD+LGR+LL+
Sbjct: 385 QQQEANAKQQESKIEN---PSPLQVRWSLIDEKRELKSLLMDPSGRYAVATDNLGRVLLV 441
Query: 189 DTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAY------------------------ 224
D ++VR+WKGYRD C ++ L N+D
Sbjct: 442 DIVNSLIVRMWKGYRDCQCGWINQLSNEDDDDEEEEEDSNDNNVDKDNNSSNSNNNDSFM 501
Query: 225 ----YAPVK--------SDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKIL--- 269
+ P K + Y LAI+ R+G +EVW M+ R++ + G +++
Sbjct: 502 TLEDFIPAKMMKKKVGVNHYRTYLAIYIGRRGYLEVWGMKHKSRVVFEKVGMGCRLISTS 561
Query: 270 ----QPTYRFGSSMASSP 283
+P + G + SSP
Sbjct: 562 VPGKRPPIQQGQTQLSSP 579
>gi|323456949|gb|EGB12815.1| hypothetical protein AURANDRAFT_60903 [Aureococcus anophagefferens]
Length = 1272
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 159 DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDA 218
D R+ + +SP G LAA++D+LGR+LL+D A +VRL+KG R A ++E+ A
Sbjct: 232 DAGREAHGVAVSPRGDLAAVSDNLGRVLLVDVAAGRLVRLFKGARRAQVAWVEVDDGDGA 291
Query: 219 ATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGP 255
T Y LAI AP++ + VW+ R GP
Sbjct: 292 KTPGLY-----------LAILAPQRALARVWRCRFGP 317
>gi|384252390|gb|EIE25866.1| hypothetical protein COCSUDRAFT_60876 [Coccomyxa subellipsoidea
C-169]
Length = 462
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 60 PCADAAITGLMPPPLMEVQSSQRY---FCAVTIGEDSVISAFRLSEDRSRSLVGAILSKV 116
P +DA G P L V +S+ +T+G I++F + E ++ + A+ S +
Sbjct: 109 PRSDALCLGSKFPGLYSVMTSRDTNPSLLLLTVGRLPPIASFEVKEHAAQGTL-ALFSDM 167
Query: 117 VPATFSTISSLSKMI--------------W-----RSEQSPKKSEPK------PQSFARA 151
S ++ L+K W S S S P PQ+ A
Sbjct: 168 ASTAVSGMAGLAKAAIVGRDDGYRAGLRKWLRGRGESHSSEAPSSPMTPTDDVPQAAEPA 227
Query: 152 SPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFM 210
+ KD R LT +P GS AA+TD+LGR+LL+DT +++++KGYRDA C ++
Sbjct: 228 TLWRSFKDDARHITSLTPAPRGSFAAVTDNLGRVLLIDTATAAILQVFKGYRDAQCAWL 286
>gi|66813206|ref|XP_640782.1| hypothetical protein DDB_G0281043 [Dictyostelium discoideum AX4]
gi|60468818|gb|EAL66818.1| hypothetical protein DDB_G0281043 [Dictyostelium discoideum AX4]
Length = 634
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 34/164 (20%)
Query: 138 PKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVR 197
P + +P P + A + D R+ + + PSG A TD+LGR+LL+D +VV+
Sbjct: 421 PHQEKPVPLALRWA-----ITDFKREIISINIDPSGRYAISTDNLGRVLLIDLVNSLVVK 475
Query: 198 LWKGYRDASCVFMEMLVNKDAATSSAY---------------------YAP----VKSDY 232
+WKGYRD C F+ ++ N + +++ + P KS
Sbjct: 476 IWKGYRDCQCGFVSVVENNNNNNNNSDNENNENNENNENNENNEDLEDFIPRKLLKKSSS 535
Query: 233 CL----CLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPT 272
L L I+ R+GI+E+W ++ R KG K++ T
Sbjct: 536 TLQSRTYLVIYLGRRGILEIWGLKHRSREYFKTIGKGCKLISTT 579
>gi|330845985|ref|XP_003294839.1| hypothetical protein DICPUDRAFT_44031 [Dictyostelium purpureum]
gi|325074615|gb|EGC28634.1| hypothetical protein DICPUDRAFT_44031 [Dictyostelium purpureum]
Length = 627
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 31/145 (21%)
Query: 156 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN 215
+ D+ R+ + + PSG A TD++GR+LLLD ++V+LWKGYRD C F+ +
Sbjct: 430 AISDYKREIQTILRDPSGRYAVCTDNIGRVLLLDLVNSLIVKLWKGYRDCQCGFINVTEE 489
Query: 216 KDA----------------ATSSAYYAPVKSDYC---------------LCLAIHAPRKG 244
+SA + D+ L I+ R+G
Sbjct: 490 NQTDQEIDIKNNNNNNNNNKNTSANESEDLEDFIPRKLLKKSTNAIQSRTFLVIYLGRRG 549
Query: 245 IIEVWQMRTGPRLLTIQCAKGSKIL 269
I+E+W ++ R +G K++
Sbjct: 550 ILEIWGLKHRSREYFKTIGQGCKLV 574
>gi|384502057|gb|EIE92548.1| hypothetical protein RO3G_17146 [Rhizopus delemar RA 99-880]
Length = 459
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 174 SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYC 233
+LAA +D+LGR++L D ++R+WKG RDA+C ++E + A P K
Sbjct: 307 TLAATSDALGRVILWDVVEGEMIRMWKGVRDAACGWVEAF-EHELYQQQAPAGPPK--VL 363
Query: 234 LCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYR--FGSSMAS 281
L IH+ + G + ++QMR G ++ G K++ P R GSSM S
Sbjct: 364 QFLVIHSSKLGSLRIFQMRHGKQVGAFHIGPGWKLV-PCAREPLGSSMVS 412
>gi|312086815|ref|XP_003145226.1| hypothetical protein LOAG_09651 [Loa loa]
Length = 918
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 195 VVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTG 254
+VR+WKGYRDA C ++E + D S Y V+ L L I APR+G++E W M+ G
Sbjct: 1 MVRMWKGYRDARCAWLEGVSTLDRKKSR-YELEVQPSTALFLIIFAPRRGLLEAWSMQNG 59
Query: 255 PRLLTIQCAKGSKILQ----PTYRFGSSMASSPYVPLEVFLL--NGDSGQLSV-LNRSLS 307
R+ + +++ + G ++ ++P VF L NG L + +R+LS
Sbjct: 60 RRVFASTVDRHGRLIGIPRLSDHLLGCDERAASHLP-SVFFLSSNGTIHHLWIPFHRALS 118
>gi|449674390|ref|XP_002155647.2| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like, partial [Hydra magnipapillata]
Length = 417
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 22/174 (12%)
Query: 48 LPHQLWNVSKYGPCADAAITGLMPPPLME-------------VQSSQRYFCA-VTIGEDS 93
L ++ W V+ D A G P + ++ S F V GE+
Sbjct: 245 LAYRKWRVADVNKITDIANCGTFTPCFFDRLMVACNVGFNETIRGSAPAFTHFVATGENK 304
Query: 94 VISAFRLSEDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFA 149
++ + + E S ++ A+ +K+ A S ++ +K W + Q EP
Sbjct: 305 FLNVYHVLEGSSPPMMSDVAIAVATKLTSAVLSPFTA-AKGWWGASQEKSTKEPAKPKVE 363
Query: 150 RASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK 200
+ L+ L D R E + ++P G LA + D+ RILL DT + +V+R+WK
Sbjct: 364 IGTNLSSRYFLHDKRRCSENIVVAPIGKLAVVNDAFNRILLFDTHSGLVIRMWK 417
>gi|328701158|ref|XP_001949788.2| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Acyrthosiphon pisum]
Length = 1313
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 70/141 (49%), Gaps = 13/141 (9%)
Query: 145 PQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKG 201
P++ + L C L + + ++ LSP S+ I+D+L ++ L + A ++R W G
Sbjct: 321 PETLEQPEQLGCRFSLNEMDCEALKIELSPQLSIGVISDNLEKVTLFEVNAGGIIRTWDG 380
Query: 202 YRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQ 261
YRD F ++VN++ ++S S L L + P + ++EVW M+ ++ +
Sbjct: 381 YRDVQ--FGWLVVNENKSSS--------SKQALFLVMFIPTREVLEVWSMQNYEKISMSK 430
Query: 262 CAKGSKILQPTYRFGSSMASS 282
+K ++ + ++++S
Sbjct: 431 VSKTGRLFYSNFGLFGALSTS 451
>gi|302844209|ref|XP_002953645.1| hypothetical protein VOLCADRAFT_94488 [Volvox carteri f.
nagariensis]
gi|300261054|gb|EFJ45269.1| hypothetical protein VOLCADRAFT_94488 [Volvox carteri f.
nagariensis]
Length = 847
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
Query: 167 LTLSPS--GSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM 212
L+LSP+ GSL A DSLGR+LL++ A++V R+WKGYRDA ++E+
Sbjct: 479 LSLSPAPYGSLVAAVDSLGRLLLVEVGAMLVSRMWKGYRDAQVAWLEV 526
>gi|397588644|gb|EJK54344.1| hypothetical protein THAOC_26038 [Thalassiosira oceanica]
Length = 1548
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 21/129 (16%)
Query: 142 EPKPQSFAR----------ASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQ 191
+P SF R AS + C DHPR+ E+ + P+G+ AA+ D+LGRI+L +
Sbjct: 521 QPPTDSFVRGKQMHSWQQSASLVFC--DHPRQFEKAIVDPTGTRAALIDNLGRIVLYNLD 578
Query: 192 ALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQM 251
++ + KG R+A C F E+ + + + L +H + ++V+++
Sbjct: 579 NKQILLILKGIRNAKCHFSELHHGNNRQQKGSR---------IFLVVHLIQVQRVDVYRL 629
Query: 252 RTGPRLLTI 260
G R+L +
Sbjct: 630 SDGSRVLAL 638
>gi|401407140|ref|XP_003883019.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325117435|emb|CBZ52987.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 392
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 26/164 (15%)
Query: 137 SPKKSEPKPQSFARASP---LTCLKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQA 192
S ++SE ++ A A+P + D R G L++ P + +AA+TDS GRI L++T +
Sbjct: 170 SAQRSENGDETQAVAAPGLSAQIVDDGRRVGSSLSVCPWNDCIAALTDSTGRISLVNTSS 229
Query: 193 LVVVRLWKGYRDASCVFMEMLVNKDAATSSA-----------YYAPVK-------SDYCL 234
L ++ +WKGYR+A ++ + SS+ +PV D
Sbjct: 230 LEILYMWKGYREAQVAWLRCFCPSHSHFSSSNPSKSWNSFSVSSSPVARGGEVRPGDPHG 289
Query: 235 CLAIHAPRKGIIEVWQMR----TGPRLLTIQCAKGSKILQPTYR 274
L I+APR+ ++E+W + + PR + I + + QPT R
Sbjct: 290 GLVIYAPRRDLVELWAVAPLGDSLPRRVAILLSGAAFAPQPTAR 333
>gi|307108839|gb|EFN57078.1| hypothetical protein CHLNCDRAFT_143843 [Chlorella variabilis]
Length = 654
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 151 ASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFM 210
AS + + D R ++ LSP+G AA DSLGR++L+DT A +VVR+ KGYR+A ++
Sbjct: 384 ASLVATVWDEKRCITQMALSPTGGWAACCDSLGRVMLVDTAATLVVRMLKGYREAQVAWL 443
>gi|47207038|emb|CAF91251.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 111 AILSKVVPATFSTISSLSKMIWR----SEQSPKKSEPKPQSFARASPLTC---LKDHPRK 163
A+ SK+ A S S + W E++ +K +PK + A+PL L D R
Sbjct: 86 AVASKLTSALLSAASGW--LGWNKNRNEEETVQKQKPKLEP---ATPLGVRFGLPDSRRH 140
Query: 164 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA 205
GE + LSP LA +TD GR+ LLD + +R+WKG +
Sbjct: 141 GESICLSPCNMLAGVTDDFGRVTLLDLARGICIRMWKGEENC 182
>gi|339249855|ref|XP_003373915.1| Rab3 GTPase-activating protein regulatory subunit [Trichinella
spiralis]
gi|316969815|gb|EFV53855.1| Rab3 GTPase-activating protein regulatory subunit [Trichinella
spiralis]
Length = 432
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 164 GERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSS 222
GER+++ P LA + DS RI+LLD + +V+ +W GY DA F + V+ +A S
Sbjct: 297 GERISVGPGNCGLAVVYDSGRRIILLDVRNHLVLHVWSGYPDAQ--FGWLPVHDEALNS- 353
Query: 223 AYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRFGSSMASS 282
S + L I P KG +E W ++ + T+ ++ ++ ++AS+
Sbjct: 354 -------SHFILLFVIFVPAKGRLEFWHLQNCRLIATMAVDPQGTLISASH----TVAST 402
Query: 283 PYVPLEVFLLNG 294
+PL ++G
Sbjct: 403 DQLPLCFLNMSG 414
>gi|268567173|ref|XP_002639910.1| C. briggsae CBR-RBG-2 protein [Caenorhabditis briggsae]
Length = 1308
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 149 ARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV 208
A +P L R + ++ SP + A+TD L R++++D VV ++KGYRDAS
Sbjct: 359 AVHAPTRSLILETRIAQTVSRSPDCNYVAVTDRLARVIIIDVINRQVVLIFKGYRDASVS 418
Query: 209 FMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRL 257
++ ++T +A L I APR+ ++EVW + R+
Sbjct: 419 WV-------SSTQDDRFAQF-------LTIFAPRRSLLEVWTVLGNVRV 453
>gi|71991172|ref|NP_001021632.1| Protein RBG-2, isoform b [Caenorhabditis elegans]
gi|38422271|emb|CAE54924.1| Protein RBG-2, isoform b [Caenorhabditis elegans]
Length = 1291
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 18/103 (17%)
Query: 162 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATS 221
R + ++ SP A+TD + R+L++D + VV ++KGYRDAS ++ + + A
Sbjct: 358 RVAQNVSRSPDCQYVAVTDRMARVLVIDIASRQVVLIFKGYRDASISWVSVTEDDRVAQ- 416
Query: 222 SAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAK 264
L I APR+ ++EVW + R+ CA+
Sbjct: 417 -------------FLTIFAPRRSLLEVWTVLGNVRV----CAQ 442
>gi|71991165|ref|NP_001021631.1| Protein RBG-2, isoform a [Caenorhabditis elegans]
gi|62511100|sp|Q22670.1|RBGPR_CAEEL RecName: Full=Rab3 GTPase-activating protein regulatory subunit;
AltName: Full=Rab3 GTPase-activating protein 2
gi|3880032|emb|CAA99926.1| Protein RBG-2, isoform a [Caenorhabditis elegans]
Length = 1307
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 18/103 (17%)
Query: 162 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATS 221
R + ++ SP A+TD + R+L++D + VV ++KGYRDAS ++ + + A
Sbjct: 374 RVAQNVSRSPDCQYVAVTDRMARVLVIDIASRQVVLIFKGYRDASISWVSVTEDDRVAQ- 432
Query: 222 SAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAK 264
L I APR+ ++EVW + R+ CA+
Sbjct: 433 -------------FLTIFAPRRSLLEVWTVLGNVRV----CAQ 458
>gi|221487060|gb|EEE25306.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 356
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 153 PLTCLKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFME 211
P + D R G L + P + SLAA+TDS G+I L+ T +L ++ +WKGYR+A ++
Sbjct: 27 PAKIVDDSKRVGLSLAVCPWNNSLAALTDSCGKISLISTSSLEILFMWKGYREAQVAWLR 86
Query: 212 MLVNKDAATSSAYYAPVK------SDYCLCLAIHAPRKGIIE 247
++S P+ D L ++APR+G E
Sbjct: 87 CFCPLPHDSNSCSSPPLSREGARPGDPHGGLVLYAPRRGERE 128
>gi|341894701|gb|EGT50636.1| hypothetical protein CAEBREN_05070 [Caenorhabditis brenneri]
Length = 1304
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 18/116 (15%)
Query: 149 ARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV 208
A +P L R + ++ SP + A+TD + R+L++D VV ++KGYRDA+
Sbjct: 359 AVHAPTRSLILETRIAQSVSRSPDSNYVAVTDRMARVLVIDVINRQVVLIFKGYRDATVS 418
Query: 209 FMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAK 264
++ +AT A L I APR+ ++EVW + R+ CA+
Sbjct: 419 WV-------SATQDDRVAQF-------LTIFAPRRSLLEVWTVLGNVRV----CAQ 456
>gi|341898223|gb|EGT54158.1| hypothetical protein CAEBREN_06178 [Caenorhabditis brenneri]
Length = 1307
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 18/116 (15%)
Query: 149 ARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV 208
A +P L R + ++ SP + A+TD + R+L++D VV ++KGYRDA+
Sbjct: 359 AIHAPTRSLILETRIAQSVSRSPDSNYVAVTDRMARVLVIDVINRQVVLIFKGYRDATVS 418
Query: 209 FMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAK 264
++ +AT A L I APR+ ++EVW + R+ CA+
Sbjct: 419 WV-------SATQDDRVAQF-------LTIFAPRRSLLEVWTVLGNVRV----CAQ 456
>gi|308463132|ref|XP_003093843.1| CRE-RBG-2 protein [Caenorhabditis remanei]
gi|308249283|gb|EFO93235.1| CRE-RBG-2 protein [Caenorhabditis remanei]
Length = 942
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 18/103 (17%)
Query: 162 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATS 221
R + ++ SP + A+TD L R+L++D VV ++KGYRDA+ ++ +AT
Sbjct: 375 RIAQTVSRSPDCNYVAVTDRLARVLVIDIINRQVVLIFKGYRDATVSWV-------SATQ 427
Query: 222 SAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAK 264
A L I APR+ ++EVW + R+ CA+
Sbjct: 428 EDRVAQF-------LTIFAPRRSLLEVWTVLGNVRV----CAQ 459
>gi|159471638|ref|XP_001693963.1| hypothetical protein CHLREDRAFT_173276 [Chlamydomonas reinhardtii]
gi|158277130|gb|EDP02899.1| hypothetical protein CHLREDRAFT_173276 [Chlamydomonas reinhardtii]
Length = 618
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 138 PKKSEPKPQSFARASPLTCLKDHPRKGER---LTLSPSGSLAAITDSLGRILLLDTQALV 194
P S P + R C + H G L +P GSL + D LGR+ L++ ++
Sbjct: 402 PLASFPDGTAGQRLPATGCWRQHRDDGRLVGCLAPAPHGSLVSAVDGLGRVTLVEAGGML 461
Query: 195 VVRLWKGYRDA 205
V R+WKGYRDA
Sbjct: 462 VSRMWKGYRDA 472
>gi|237831583|ref|XP_002365089.1| hypothetical protein TGME49_058750 [Toxoplasma gondii ME49]
gi|211962753|gb|EEA97948.1| hypothetical protein TGME49_058750 [Toxoplasma gondii ME49]
gi|221506746|gb|EEE32363.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 410
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 153 PLTCLKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFME 211
P + D R G L + P + SLAA+TDS G+I L+ T +L ++ +WKGYR+A ++
Sbjct: 48 PAKIVDDSKRVGLSLAVCPWNNSLAALTDSCGKISLISTSSLEILFMWKGYREAQVAWLR 107
Query: 212 MLVNKDAATSSAYYAPVK------SDYCLCLAIHAPRKGIIE 247
++S P+ D L ++APR+G E
Sbjct: 108 CFCPLPHDSNSCSSPPLSREGARPGDPHGGLVLYAPRRGERE 149
>gi|123415256|ref|XP_001304656.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121886123|gb|EAX91726.1| hypothetical protein TVAG_384500 [Trichomonas vaginalis G3]
Length = 652
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 21/177 (11%)
Query: 88 TIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQS 147
TIG + S F + S V I++ + W + K E +
Sbjct: 190 TIGNNPFFSVFSAANSDSTISVKKIVTNLFK-------------WMAFTDNNKQE---EE 233
Query: 148 FARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASC 207
+ ++ L+D R + P+G +I D GR+LL+D+ +V+++KG RDA
Sbjct: 234 YPKSKKQWNLRDEGRVTRSIEADPTGRWISICDGQGRVLLIDSVFGHMVKVYKGLRDAQV 293
Query: 208 VFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAK 264
+ E +KD YAP + + +A P II+ + G +L+ + K
Sbjct: 294 AWSESSSSKDPVL--IIYAPYRK---MIIACTTPNGEIIDAVRAAPGGKLIQLHTPK 345
>gi|387220215|gb|AFJ69816.1| rab3 gtpase-activating protein non-catalytic subunit, partial
[Nannochloropsis gaditana CCMP526]
Length = 58
Score = 45.8 bits (107), Expect = 0.026, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 169 LSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFME 211
+ PSG L A+TD+LGR+++LD + V+RL+KG+R A ++E
Sbjct: 1 MDPSGRLIAVTDTLGRVMVLDLRTRQVLRLFKGHRGAQVGWLE 43
>gi|401420890|ref|XP_003874934.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491170|emb|CBZ26435.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1771
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 26/205 (12%)
Query: 73 PLMEVQSSQRYFCAVTI--GEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKM 130
PL+ +QR F V + G + + S+FRL SR S V A S ++ +++
Sbjct: 406 PLLSPLEAQRGFSDVLLVGGTNPLFSSFRLQPPPSRFSA----SNTVAAVKSMVTGVARS 461
Query: 131 IWRSEQSPKKSEPKPQSFARASPL--TCLKDHPRKGERLTLSPSGSLAAIT-DSLGRILL 187
+W K+ P + + L L K L + P+ AA+ + GRI +
Sbjct: 462 LWSKAIGASKTVDHPPRLKKVAALRTHTLLQADAKCTALQVDPTQQWAALAIEGGGRIYV 521
Query: 188 LDTQALVVVRLWKGYRDASCVF--MEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGI 245
+D Q+ +V + KG R A + E+ + A L L ++ P +
Sbjct: 522 VDVQSGIVAAVLKGCRAAQFTWWWTELAGGRPA---------------LLLVVYLPLRRA 566
Query: 246 IEVWQMRTGPRLLTIQCAKGSKILQ 270
+EV+ RT RL KGS +L+
Sbjct: 567 VEVYTTRTWQRLAARHVPKGSVLLR 591
>gi|260830643|ref|XP_002610270.1| hypothetical protein BRAFLDRAFT_126836 [Branchiostoma floridae]
gi|229295634|gb|EEN66280.1| hypothetical protein BRAFLDRAFT_126836 [Branchiostoma floridae]
Length = 787
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 234 LCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTY 273
L L I+APR+GI+EVW M+ GPR+ K ++L P Y
Sbjct: 11 LFLIIYAPRRGILEVWAMQQGPRVAAFNVGKQCRLLCPGY 50
>gi|33438278|dbj|BAC65667.2| mKIAA0839 protein [Mus musculus]
Length = 892
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 236 LAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYRF 275
L I+APR+GI+EVW + GPR+ K ++L P Y+
Sbjct: 32 LVIYAPRRGILEVWNTQQGPRVGAFNVGKHCRLLYPGYKI 71
>gi|398025104|ref|XP_003865713.1| hypothetical protein, conserved [Leishmania donovani]
gi|322503950|emb|CBZ39037.1| hypothetical protein, conserved [Leishmania donovani]
Length = 1770
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 26/205 (12%)
Query: 73 PLMEVQSSQRYFCAVTI--GEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKM 130
PL+ QR F V + G + + S+FRL SR S V A ++ +++
Sbjct: 406 PLLSPLEVQRGFSDVLLVGGTNPLFSSFRLQPPPSRFSA----SNTVAAVKHMVTGVARS 461
Query: 131 IWRSEQSPKKSEPKPQSFARASPL--TCLKDHPRKGERLTLSPSGSLAAIT-DSLGRILL 187
+W K+ P + + L L K L + P+ AA+ + GRI +
Sbjct: 462 LWSKAIGTSKTVEHPPHLKKVAALRTHTLLQADAKCTALQVDPTQQWAALAIEGGGRIYV 521
Query: 188 LDTQALVVVRLWKGYRDASCVF--MEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGI 245
D Q+ +V + KG R A + E+ + A L L ++ P +
Sbjct: 522 ADVQSGIVATVLKGCRAAQFTWWWTELAAGRPA---------------LLLVVYLPLRSA 566
Query: 246 IEVWQMRTGPRLLTIQCAKGSKILQ 270
+EV+ RT RL KGS +L+
Sbjct: 567 VEVYTTRTWQRLAARHVPKGSVLLR 591
>gi|146104998|ref|XP_001469959.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134074329|emb|CAM73076.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 1770
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 82/205 (40%), Gaps = 26/205 (12%)
Query: 73 PLMEVQSSQRYFCAVTI--GEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKM 130
PL+ QR F V + G + S+FRL SR S V A ++ +++
Sbjct: 406 PLLSPLEVQRGFSDVLLVGGTSPLFSSFRLQPPPSRFSA----SNTVAAVKHMVTGVARS 461
Query: 131 IWRSEQSPKKSEPKPQSFARASPL--TCLKDHPRKGERLTLSPSGSLAAIT-DSLGRILL 187
+W K+ P + + L L K L + P+ AA+ + GRI +
Sbjct: 462 LWSKAIGTSKTVEHPPHLKKVAALRTHTLLQADAKCTALQVDPTQQWAALAIEGGGRIYV 521
Query: 188 LDTQALVVVRLWKGYRDASCVF--MEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGI 245
D Q+ +V + KG R A + E+ + A L L ++ P +
Sbjct: 522 ADVQSGIVATVLKGCRAAQFTWWWTELAAGRPA---------------LLLVVYLPLRSA 566
Query: 246 IEVWQMRTGPRLLTIQCAKGSKILQ 270
+EV+ RT RL KGS +L+
Sbjct: 567 VEVYTTRTWQRLAARHVPKGSVLLR 591
>gi|260830641|ref|XP_002610269.1| hypothetical protein BRAFLDRAFT_92993 [Branchiostoma floridae]
gi|229295633|gb|EEN66279.1| hypothetical protein BRAFLDRAFT_92993 [Branchiostoma floridae]
Length = 149
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 157 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVR 197
L D R G+ + LSP LAA TDS GR++L+DT V +R
Sbjct: 109 LPDLRRHGDSIVLSPGRQLAATTDSFGRVILIDTDKGVAIR 149
>gi|157877717|ref|XP_001687163.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68130238|emb|CAJ09550.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 1770
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 26/211 (12%)
Query: 67 TGLMPPPLMEVQSSQRYFCAVTI--GEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTI 124
+G PL+ +QR F V + G + S+FRL SR S V A +
Sbjct: 400 SGAGASPLLSPLEAQRGFSDVLLVGGTSPLFSSFRLQLPPSRFSA----SNTVAAVKHMV 455
Query: 125 SSLSKMIWRSEQSPKKSEPKPQSFARASPL--TCLKDHPRKGERLTLSPSGSLAAIT-DS 181
+ +++ +W K+ +P + + L L K L + P+ A+ +
Sbjct: 456 TGVARSLWSKAIGTSKTVARPPHLKKVAALRTHALLQADAKCTALQVDPTQQWTALAIEG 515
Query: 182 LGRILLLDTQALVVVRLWKGYRDASCVF--MEMLVNKDAATSSAYYAPVKSDYCLCLAIH 239
GRI + D Q+ +V + KG R A + E+ + A L L ++
Sbjct: 516 GGRIYVADVQSGIVATVLKGCRAAQFTWWWTELAGGRPA---------------LLLVVY 560
Query: 240 APRKGIIEVWQMRTGPRLLTIQCAKGSKILQ 270
P + +EV+ RT RL KGS +L+
Sbjct: 561 LPLRRAVEVYTTRTWQRLAARHVPKGSVLLR 591
>gi|391338980|ref|XP_003743831.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Metaseiulus occidentalis]
Length = 1245
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 100 LSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSE-QSPKKSEPKPQSFARASPLTCLK 158
+S + S++ + + ++ V F+ + S + W S+ +P ++E P + S L L
Sbjct: 253 VSREVSQTNLVSDIAVAVANKFTRMLSDNVPFWGSKSNAPTEAELAP----KISNLNVLH 308
Query: 159 DH-----PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML 213
H R G + +SPS A+ DSL R++L+D + + KGYR A ++
Sbjct: 309 QHGIFDRDRLGTSMCVSPSKRFIALVDSLARVVLMDAGKGTPLYVMKGYRKAQLGWI--- 365
Query: 214 VNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTY 273
TSS+ ++ L I+ + +E+W R R+ G+ L Y
Sbjct: 366 ------TSSSLDGSGRT--LELLVIYCAKSMQLELWNTRKATRVTAFSAPGGAGFL--VY 415
Query: 274 RFGSSMASS 282
GS A +
Sbjct: 416 DSGSIAAGN 424
>gi|15238760|ref|NP_200162.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
gi|9759189|dbj|BAB09726.1| unnamed protein product [Arabidopsis thaliana]
gi|20268729|gb|AAM14068.1| unknown protein [Arabidopsis thaliana]
gi|23296399|gb|AAN13109.1| unknown protein [Arabidopsis thaliana]
gi|332008987|gb|AED96370.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
Length = 654
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 29/175 (16%)
Query: 90 GEDSVISAFRLSEDRSRSLVGAILSKVVPAT-FSTISSLSKM--IWRSEQSPKKSEPKPQ 146
GED ++ +++ ED+ L L+++ P+ + ++ LS++ + +E+ PKK+ +
Sbjct: 240 GEDGIVRVWKVVEDKKSRLRRDCLNEIDPSCMYFEVNDLSQLKPVLVNEEKPKKT---TE 296
Query: 147 SFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRIL---------LLDTQALVVVR 197
SF + S C+ P K R+ P L G +L LL VR
Sbjct: 297 SFRKTSDSACVV-FPPKVFRIMEKP---LYEFRGHTGEVLDISWSKDNYLLSASMDKTVR 352
Query: 198 LWK-GYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQM 251
LWK G D VF ++ +S + PV +Y + +I G + +W +
Sbjct: 353 LWKVGSNDCLGVFAH-----NSYVTSVQFNPVNENYFMSGSI----DGKVRIWNI 398
>gi|397473190|ref|XP_003808101.1| PREDICTED: WD repeat-containing protein 38 isoform 1 [Pan paniscus]
gi|410043169|ref|XP_003951573.1| PREDICTED: WD repeat-containing protein 38 [Pan troglodytes]
Length = 315
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 149 ARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV 208
ARA L LK H R E ++ SP A R++L D Q+ ++RL G+RD
Sbjct: 93 ARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRD---- 148
Query: 209 FMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKG 265
+ S+ ++P + CLA + +W +RTG ++ Q +G
Sbjct: 149 ----------SIQSSDFSPTVN----CLAT-GSWDSTVRIWDLRTGTPAVSHQALEG 190
>gi|332832862|ref|XP_003312328.1| PREDICTED: WD repeat-containing protein 38 isoform 2 [Pan
troglodytes]
gi|397473192|ref|XP_003808102.1| PREDICTED: WD repeat-containing protein 38 isoform 2 [Pan paniscus]
Length = 304
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 149 ARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV 208
ARA L LK H R E ++ SP A R++L D Q+ ++RL G+RD
Sbjct: 82 ARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRD---- 137
Query: 209 FMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKG 265
+ S+ ++P + CLA + +W +RTG ++ Q +G
Sbjct: 138 ----------SIQSSDFSPTVN----CLAT-GSWDSTVRIWDLRTGTPAVSHQALEG 179
>gi|371532887|gb|AEX32567.1| RNA polymerase beta chain [Dunaliella tertiolecta]
Length = 452
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 131 IWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDT 190
I+ ++ PKK+E K ++F R++ TCL P E + L +S+G L L
Sbjct: 83 IFNNKIIPKKTEYKLETFHRSNQDTCLTHKPAVFEGDWVQSGDFLTDCANSVGGELSLGQ 142
Query: 191 QALVVVRLWKGYRDASCVFM-EMLVNKDAATS 221
+ W+GY + + E LV+ D TS
Sbjct: 143 NIFIAYMPWEGYNFEDAILISERLVSDDLFTS 174
>gi|355567917|gb|EHH24258.1| WD repeat-containing protein 38 [Macaca mulatta]
Length = 314
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 149 ARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV 208
ARA L LK H R E ++ SP A R++L + Q+ ++RL G+RD
Sbjct: 93 ARAKCLQVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWEVQSGQMLRLLVGHRD---- 148
Query: 209 FMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKG 265
+ S+ ++P + CLA I +W +RTG ++ Q +G
Sbjct: 149 ----------SVQSSDFSPTVN----CLAT-GSWDATIRIWDLRTGTPAVSHQALEG 190
>gi|407410101|gb|EKF32666.1| hypothetical protein MOQ_003477 [Trypanosoma cruzi marinkellei]
Length = 1522
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 58 YGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVV 117
+G +D A + P ME V GE +S + + +R+ A K V
Sbjct: 337 FGNLSDTAAILRIGPQAME--------SLVLCGEAPALSMYTF--ESTRATFSA--RKTV 384
Query: 118 PATFSTISSLSKMIW-RSEQSPKKSEPKPQSFARASPLTCLKDHPRKGERL----TLSPS 172
A S + +++ IW RS ++ K KPQ A+ +KD + + + + P+
Sbjct: 385 RAVVSVLGGMARRIWQRSSENEDKGAMKPQRLAKRHQK--VKDAFFEADMVFNVVQVDPT 442
Query: 173 GSLAA-ITDSLGRILLLDTQALVVVRLWKGYRDAS---CVFMEMLVNKDAATSSAYYAPV 228
AA ++S GRI L D + R+ KG R A CV A +
Sbjct: 443 FQWAACYSESSGRIYLYDLMGGALWRVMKGCRSAKFQWCV-----------------ATI 485
Query: 229 KSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQP 271
L L +H + +EV+ +R G RL +GS +L+P
Sbjct: 486 AGKRMLLLVVHLLLRYAVEVYSLRLGQRLAARHVPQGSILLRP 528
>gi|148238724|ref|YP_001224111.1| bifunctional cobalamin biosynthesis protein/precorrin-3B
C17-methyltransferase CbiG/CobJ [Synechococcus sp. WH
7803]
gi|147847263|emb|CAK22814.1| Bifunctional protein CbiG/CobJ (cobalamin biosynthesis protein and
precorrin-3B C17-methyltransferase) [Synechococcus sp.
WH 7803]
Length = 582
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 67/157 (42%), Gaps = 24/157 (15%)
Query: 127 LSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAIT------- 179
+S+ I S + +P P S AS L+ H R+G RL + G+L A+T
Sbjct: 1 MSERIALSPSAAASLDPCPDSVLVASASELLQTHWREGGRLIVV--GALGAVTRLIAPLI 58
Query: 180 ---DSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 236
+S +L+LDTQ L VV L G+R E L ++ A S A + D
Sbjct: 59 NDKESDPAVLVLDTQGLQVVPLLGGHRAGG----EQLA-RELAASLGGTAVITGDAATQG 113
Query: 237 AIHAPRKGIIEVWQMRTGP-----RLLTIQCAKGSKI 268
+ G E+W R R L IQ A+GS I
Sbjct: 114 RLALDSFG--EIWGFRRSGTTDAWRRLMIQQAQGSPI 148
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,677,958,880
Number of Sequences: 23463169
Number of extensions: 181458081
Number of successful extensions: 420414
Number of sequences better than 100.0: 184
Number of HSP's better than 100.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 420038
Number of HSP's gapped (non-prelim): 209
length of query: 307
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 165
effective length of database: 9,027,425,369
effective search space: 1489525185885
effective search space used: 1489525185885
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)