Query 021798
Match_columns 307
No_of_seqs 202 out of 2007
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 05:46:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021798.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021798hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 1.5E-48 3.3E-53 346.8 19.7 215 46-274 4-219 (238)
2 PLN00184 aquaporin NIP1; Provi 100.0 2.8E-46 6.2E-51 343.6 21.5 211 49-271 50-263 (296)
3 KOG0224 Aquaporin (major intri 100.0 9.3E-47 2E-51 337.7 12.6 216 49-271 28-265 (316)
4 PF00230 MIP: Major intrinsic 100.0 1.5E-45 3.3E-50 329.5 17.4 223 46-275 1-226 (227)
5 COG0580 GlpF Glycerol uptake f 100.0 7.6E-45 1.6E-49 322.2 19.0 219 51-275 3-234 (241)
6 PTZ00016 aquaglyceroporin; Pro 100.0 6.7E-44 1.4E-48 328.7 22.2 215 50-272 47-281 (294)
7 PRK05420 aquaporin Z; Provisio 100.0 7.8E-44 1.7E-48 318.5 21.1 214 53-275 2-222 (231)
8 PLN00166 aquaporin TIP2; Provi 100.0 2.2E-43 4.8E-48 318.5 22.1 213 48-271 13-227 (250)
9 PLN00167 aquaporin TIP5; Provi 100.0 1.9E-43 4.1E-48 319.8 21.6 212 48-271 17-230 (256)
10 PLN00026 aquaporin NIP; Provi 100.0 1.8E-43 3.8E-48 324.5 20.1 224 49-289 67-294 (298)
11 PLN00027 aquaporin TIP; Provis 100.0 9E-43 1.9E-47 315.4 20.7 212 49-271 16-229 (252)
12 PLN00182 putative aquaporin NI 100.0 4.1E-42 8.9E-47 314.2 22.9 207 49-271 38-244 (283)
13 PLN00183 putative aquaporin NI 100.0 4.3E-40 9.2E-45 300.0 19.7 238 15-271 8-246 (274)
14 cd00333 MIP Major intrinsic pr 100.0 8.1E-40 1.8E-44 292.8 19.1 216 54-275 1-224 (228)
15 TIGR00861 MIP MIP family chann 100.0 4E-39 8.7E-44 286.1 18.7 213 58-275 1-215 (216)
16 PLN00182 putative aquaporin NI 99.8 1.4E-18 3.1E-23 159.3 11.5 131 15-156 123-253 (283)
17 cd00333 MIP Major intrinsic pr 99.7 3.2E-18 7E-23 153.2 9.2 134 15-154 82-227 (228)
18 PLN00026 aquaporin NIP; Provi 99.7 4.4E-18 9.5E-23 156.8 9.8 130 15-156 152-281 (298)
19 PLN00183 putative aquaporin NI 99.7 1.1E-17 2.3E-22 152.9 10.8 133 15-159 126-258 (274)
20 KOG0223 Aquaporin (major intri 99.7 4E-18 8.6E-23 152.1 6.5 136 14-159 91-228 (238)
21 TIGR00861 MIP MIP family chann 99.7 3.8E-17 8.3E-22 145.1 10.3 131 15-151 82-215 (216)
22 PLN00184 aquaporin NIP1; Provi 99.7 3.7E-16 8E-21 144.3 11.1 134 15-157 135-273 (296)
23 PLN00166 aquaporin TIP2; Provi 99.6 6E-15 1.3E-19 133.5 12.2 133 15-156 104-236 (250)
24 PLN00027 aquaporin TIP; Provis 99.6 1E-14 2.2E-19 132.4 12.3 133 15-156 106-238 (252)
25 PRK05420 aquaporin Z; Provisio 99.6 6.4E-15 1.4E-19 132.0 10.8 134 14-156 83-227 (231)
26 PF00230 MIP: Major intrinsic 99.6 1.9E-14 4E-19 128.7 9.9 131 15-152 95-227 (227)
27 PLN00167 aquaporin TIP5; Provi 99.5 2.3E-14 4.9E-19 130.1 10.5 137 14-160 107-243 (256)
28 PTZ00016 aquaglyceroporin; Pro 99.5 1.9E-14 4.1E-19 133.1 9.9 137 15-158 131-291 (294)
29 COG0580 GlpF Glycerol uptake f 99.5 1.1E-13 2.4E-18 123.3 10.5 135 14-156 88-239 (241)
30 KOG0224 Aquaporin (major intri 98.8 2.6E-09 5.7E-14 97.0 4.2 124 177-302 31-163 (316)
31 COG2116 FocA Formate/nitrite f 79.1 52 0.0011 30.2 14.4 144 51-200 30-181 (265)
32 PRK10805 formate transporter; 65.7 1.1E+02 0.0025 28.2 12.0 103 93-199 72-183 (285)
33 PF01226 Form_Nir_trans: Forma 62.4 1.1E+02 0.0025 27.6 10.8 110 89-202 57-175 (250)
34 PRK11562 nitrite transporter N 52.4 1.9E+02 0.0041 26.6 11.5 106 92-200 61-173 (268)
35 KOG2533 Permease of the major 43.9 1.4E+02 0.003 30.0 8.9 71 116-196 152-224 (495)
36 PF04632 FUSC: Fusaric acid re 40.3 4.2E+02 0.009 27.0 13.7 54 103-156 355-411 (650)
37 PF03033 Glyco_transf_28: Glyc 39.1 11 0.00025 29.8 0.3 19 110-128 7-25 (139)
38 PRK12446 undecaprenyldiphospho 37.2 9.9 0.00021 36.1 -0.4 21 107-127 7-27 (352)
39 TIGR00790 fnt formate/nitrite 35.7 3.2E+02 0.007 24.4 10.2 83 116-198 68-158 (239)
40 PRK09713 focB putative formate 30.2 4.5E+02 0.0097 24.3 11.2 102 93-200 71-183 (282)
41 COG0730 Predicted permeases [G 29.7 3.2E+02 0.0069 24.3 8.3 30 126-155 68-97 (258)
42 PF08370 PDR_assoc: Plant PDR 25.0 1.3E+02 0.0028 21.4 3.8 42 240-282 9-60 (65)
43 TIGR02762 TraL_TIGR type IV co 22.5 24 0.00052 27.0 -0.5 18 249-266 61-78 (95)
44 COG1289 Predicted membrane pro 20.9 6.8E+02 0.015 26.0 9.7 27 130-156 399-425 (674)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-48 Score=346.80 Aligned_cols=215 Identities=50% Similarity=0.723 Sum_probs=188.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHH
Q 021798 46 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (307)
Q Consensus 46 ~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~ 125 (307)
+.++++.+|++++||++|++++|+++++...... .....+.+.+++++|+.+++.+++++++||||+|||||+++++
T Consensus 4 ~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~---~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~ 80 (238)
T KOG0223|consen 4 ELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPK---YGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAV 80 (238)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---cCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHH
Confidence 4456789999999999999999999998775443 1224457889999999999999999999999999999999999
Q ss_pred hhcCccchhHHHHHhhhhhHHHHhHHHHhhcccccccccCCCcceecCCCCcCchhhHHHHHHHHHHHHHHH-hcccccc
Q 021798 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRS 204 (307)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~iL~~~il~-~~~~~~~ 204 (307)
.|++++.+++.|+++|++|+++|+++++.+.+. .+...+.+.+.+.++.+.+|+++.|++.||+|++++++ .+|+|++
T Consensus 81 ~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~ 159 (238)
T KOG0223|consen 81 GGKISLFRAVAYIVAQLLGAIAGAALLKVVTPG-QYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS 159 (238)
T ss_pred hCCCcHHHhHHHHHHHHHHHHHHHHHHheecCc-ccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc
Confidence 999999999999999999999999999999833 22333344566788899999999999999999999999 7777764
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHcCCCCCCCcceeeecchHHHHHHHHh
Q 021798 205 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVLDFLGGTIRWSWTRS 274 (307)
Q Consensus 205 ~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~~~~wvy~vgP~~Ga~l~~~ 274 (307)
.+.|+.||+++.+.++++++.||++|||||+|||+++++ .|++|||||+||++|++++..
T Consensus 160 -------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~---~w~~hwiYwvgP~~Ga~~a~~ 219 (238)
T KOG0223|consen 160 -------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG---SWDDHWIYWVGPLLGAILAAL 219 (238)
T ss_pred -------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc---CCCcEEEEEhhHHHHHHHHHH
Confidence 478999999999999999999999999999999999986 599999999999999976333
No 2
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=2.8e-46 Score=343.63 Aligned_cols=211 Identities=27% Similarity=0.409 Sum_probs=174.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhc
Q 021798 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (307)
Q Consensus 49 ~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~ 128 (307)
+.+++|++++||+|||+|+|++++++...... ....+.+.+++++|+++++.+++++++||+|+|||||+++++.++
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~---~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~ 126 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQN---DNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGR 126 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccC---CCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCC
Confidence 45689999999999999999999876532211 112346678899999999999999999999999999999999999
Q ss_pred CccchhHHHHHhhhhhHHHHhHHHHhhcccccccccCCC---cceecCCCCcCchhhHHHHHHHHHHHHHHHhccccccC
Q 021798 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG---ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (307)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~E~~~T~iL~~~il~~~~~~~~~ 205 (307)
++|.+.++||++|++||++|+++++.+++... ...... .....+..+.+++|+.|+++|++|+++++++.++++..
T Consensus 127 ~~~~~~~~YiiaQllGA~lga~~~~~l~~~~~-~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~~ 205 (296)
T PLN00184 127 FPLKQVPAYVISQVIGSTLAAATLRLLFGLDH-DVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAI 205 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-hccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcCC
Confidence 99999999999999999999999999884321 111111 11223345678999999999999999999876654321
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHcCCCCCCCcceeeecchHHHHHH
Q 021798 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVLDFLGGTIRWSW 271 (307)
Q Consensus 206 ~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~~~~wvy~vgP~~Ga~l 271 (307)
..+.|+.||+++.+.++..+++||++|||||||||+++++ .|+++||||+||++|+++
T Consensus 206 -----~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~---~~~~~WVy~vgPilGa~l 263 (296)
T PLN00184 206 -----GELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG---CYKGIWIYIVAPTLGAIA 263 (296)
T ss_pred -----CcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh---cccccchHHhHHHHHHHH
Confidence 2368999999999999999999999999999999999975 689999999999999976
No 3
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.3e-47 Score=337.69 Aligned_cols=216 Identities=28% Similarity=0.398 Sum_probs=184.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhc
Q 021798 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (307)
Q Consensus 49 ~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~ 128 (307)
+.++.|++++||+||++|++++++++++...++.+. ..+..+.+++|+++++.+++.+++||||+|||||+++++.||
T Consensus 28 ~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~--g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~ 105 (316)
T KOG0224|consen 28 RNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTG--GSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGR 105 (316)
T ss_pred HHHHHHHHHHHHHhHHHHHhhccceeEEEEeccCCC--CceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcC
Confidence 457899999999999999999999998887765332 234667888999999999999999999999999999999999
Q ss_pred CccchhHHHHHhhhhhHHHHhHHHHhhcccccccccCCCc--------------ceecCCCCcCchhhHHHHHHHHHHHH
Q 021798 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGA--------------NVVAHGYTKGDGLGAEIIGTFVLVYT 194 (307)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~E~~~T~iL~~~ 194 (307)
++|+|+++|+++|++||++|++.+|.+| .+.+...+++. +.+.|..+.+++|+.|+++|.+|+.+
T Consensus 106 ~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y-~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~ 184 (316)
T KOG0224|consen 106 LPWKKFPVYVLAQFIGAFLGAATVYGLY-YDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLC 184 (316)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999998 44444444432 22356688999999999999999999
Q ss_pred HHHhccccccCCCCCCCchhHHHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHc-----CCCCCC---CcceeeecchH
Q 021798 195 VFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIY-----NKDRGW---DDHVLDFLGGT 266 (307)
Q Consensus 195 il~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~-----~~~~~~---~~~wvy~vgP~ 266 (307)
+++++|++|..+ +.+.|+.+|+.+.++.++.+.++|..+|||||||||+|. |.+.++ .+.|+.|+||+
T Consensus 185 l~aI~D~rN~~p----~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl 260 (316)
T KOG0224|consen 185 LFAITDKRNPIP----TGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPL 260 (316)
T ss_pred eeEEecCCCCCC----cchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhh
Confidence 999999998433 468999999999999999999999999999999999993 322233 45678999999
Q ss_pred HHHHH
Q 021798 267 IRWSW 271 (307)
Q Consensus 267 ~Ga~l 271 (307)
+|+++
T Consensus 261 ~Gai~ 265 (316)
T KOG0224|consen 261 IGAIL 265 (316)
T ss_pred hhhhh
Confidence 99865
No 4
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=1.5e-45 Score=329.53 Aligned_cols=223 Identities=35% Similarity=0.484 Sum_probs=187.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCC---CCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHH
Q 021798 46 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK---CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLG 122 (307)
Q Consensus 46 ~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla 122 (307)
|.++++++|++++||+||++++|+++++..+......+ ....+...+++++|+.+++.++.++++||+|+|||||++
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla 80 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLA 80 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhh
Confidence 45678999999999999999999999866543332211 112345678889999999999999999999999999999
Q ss_pred HHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhcccccccccCCCcceecCCCCcCchhhHHHHHHHHHHHHHHHhcccc
Q 021798 123 LFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 202 (307)
Q Consensus 123 ~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~iL~~~il~~~~~~ 202 (307)
.++.|+++|.+.+.|+++|++|+++|+.+++.+++ +.........+.+.++.+..++++.|+++|++|+++++...|++
T Consensus 81 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~ 159 (227)
T PF00230_consen 81 FALTGRISWKKAIVYIIAQFLGAFLGALLVYALYP-DSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDK 159 (227)
T ss_dssp HHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHST-HHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred eeeeeeecccceeeEEeeccccccccccchhhccc-CcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhcccc
Confidence 99999999999999999999999999999999983 32223333445567778889999999999999999999999988
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHcCCCCCCCcceeeecchHHHHHHHHhh
Q 021798 203 RSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVLDFLGGTIRWSWTRSF 275 (307)
Q Consensus 203 ~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~~~~wvy~vgP~~Ga~l~~~f 275 (307)
++.+. ..+.|+.||+.+.+..+..++.||++|||||||||+++.+ .|+++|+||+||++|++++..+
T Consensus 160 ~~~~~---~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~---~~~~~wvy~~~P~~Ga~~a~~~ 226 (227)
T PF00230_consen 160 RKFPL---GPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSG---IWDYFWVYWVGPFIGAILAALL 226 (227)
T ss_dssp SSSTS---SGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHT---HHTTTTHHHHHHHHHHHHHHHH
T ss_pred ccccc---ccccceeEEEEEeecccccccccccccCchhhcCceeecc---cCCeEEEEEehHHHHHHHHHhh
Confidence 76542 2378999999999999999999999999999999999985 4999999999999999886543
No 5
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.6e-45 Score=322.21 Aligned_cols=219 Identities=32% Similarity=0.479 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCc
Q 021798 51 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLS 130 (307)
Q Consensus 51 ~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~ 130 (307)
+..|++++||+||++|++++++++.+......+....++..+++++|+.+++.+|+++++||+|+|||||+++++.|+++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 35678899999999999999999887776555555667788999999999999999999999999999999999999999
Q ss_pred cchhHHHHHhhhhhHHHHhHHHHhhcccccccccC------CCcceecCC-CCcCchhhHHHHHHHHHHHHHHHhccccc
Q 021798 131 LTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLA------GGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKR 203 (307)
Q Consensus 131 ~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~E~~~T~iL~~~il~~~~~~~ 203 (307)
|++++.||++|++||++|+.++|.++ .+.++..+ .+...+.|+ .+..++|+.|+++|++|+++|+++.|+++
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~-~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~ 161 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLY-YGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGN 161 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 99999999999999999999999998 43333332 223334443 46688999999999999999999887554
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHc---CC---CCCCCcceeeecchHHHHHHHHhh
Q 021798 204 SARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIY---NK---DRGWDDHVLDFLGGTIRWSWTRSF 275 (307)
Q Consensus 204 ~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~---~~---~~~~~~~wvy~vgP~~Ga~l~~~f 275 (307)
. + ..+.|+.||+.+..+++..++.||.++|||||+|||+++ +. +.+++|+|+||+||++|+++...+
T Consensus 162 ~--~---~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~ 234 (241)
T COG0580 162 A--N---AGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALL 234 (241)
T ss_pred c--c---ccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHH
Confidence 3 1 238999999999999999999999999999999999953 31 112268999999999999875443
No 6
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=6.7e-44 Score=328.68 Aligned_cols=215 Identities=26% Similarity=0.324 Sum_probs=176.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcC
Q 021798 50 WSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKL 129 (307)
Q Consensus 50 ~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~ 129 (307)
++++|++++||+|||+++|+++++..+....+ ...+...+++++|+++++.+++++++||+|+|||||+++++.|++
T Consensus 47 ~~~~~~~laEfigT~llvf~g~g~~~~~~~~~---~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i 123 (294)
T PTZ00016 47 RPNVREYVAEFLGTFVLLFFGEGVVATTHTVG---NNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKF 123 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC---CCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccC
Confidence 57889999999999999999998765432211 123456788999999999999999999999999999999999999
Q ss_pred ccchhHHHHHhhhhhHHHHhHHHHhhcccccccccCC-------------CcceecCCCCcCchhhHHHHHHHHHHHHHH
Q 021798 130 SLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAG-------------GANVVAHGYTKGDGLGAEIIGTFVLVYTVF 196 (307)
Q Consensus 130 ~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~E~~~T~iL~~~il 196 (307)
+|.+.+.|+++|++|+++|++++|.++ ++.++..+. +.....|+.+..++|+.|+++|++|+++++
T Consensus 124 ~~~~~~~YiiaQ~lGa~~ga~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~il 202 (294)
T PTZ00016 124 PWKKLPGYFVAQLLGAFVGAACVYGLY-YGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVIL 202 (294)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHh-HHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 332222211 112234566778999999999999999999
Q ss_pred HhccccccCCCCCCCchhHHHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHcC---CCCCCC----cceeeecchHHHH
Q 021798 197 SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN---KDRGWD----DHVLDFLGGTIRW 269 (307)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~---~~~~~~----~~wvy~vgP~~Ga 269 (307)
+++|+|+... ....|+.||+.+.+++++.++.||++||||||||||++.. +...|+ ++||||+||++|+
T Consensus 203 a~~d~~~~~~----~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa 278 (294)
T PTZ00016 203 AITDPNNCPA----FNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGA 278 (294)
T ss_pred HhccCccCCC----cCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHH
Confidence 9998876432 2367999999999999999999999999999999999862 222443 6899999999998
Q ss_pred HHH
Q 021798 270 SWT 272 (307)
Q Consensus 270 ~l~ 272 (307)
+++
T Consensus 279 ~~a 281 (294)
T PTZ00016 279 VLG 281 (294)
T ss_pred HHH
Confidence 763
No 7
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=7.8e-44 Score=318.47 Aligned_cols=214 Identities=27% Similarity=0.443 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCccc
Q 021798 53 YRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLT 132 (307)
Q Consensus 53 ~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~~~ 132 (307)
+|++++||+||++++|++++++......+ ....+.+.+++++|+++++.+++++++||+|+|||||+++++.|+++|.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~--~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~ 79 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFP--ELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAK 79 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccC--CCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHH
Confidence 58999999999999999988754321111 1123456679999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhhhhHHHHhHHHHhhcccc-cccccCC-----CcceecC-CCCcCchhhHHHHHHHHHHHHHHHhccccccC
Q 021798 133 RALFYMVMQCLGAICGAGVVKGFMGAG-QYGRLAG-----GANVVAH-GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (307)
Q Consensus 133 ~~~~yi~aQ~lGa~~ga~~~~~~~~~~-~~~~~~~-----~~~~~~~-~~~~~~~~~~E~~~T~iL~~~il~~~~~~~~~ 205 (307)
+.+.|+++|++|+++|+++++.++..+ .++..+. +.....| ..+..++++.|+++|++|+++++...|+|+.
T Consensus 80 ~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~- 158 (231)
T PRK05420 80 ELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGATDKRAP- 158 (231)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCC-
Confidence 999999999999999999999887332 1111110 0011112 3466789999999999999999999886542
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHcCCCCCCCcceeeecchHHHHHHHHhh
Q 021798 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVLDFLGGTIRWSWTRSF 275 (307)
Q Consensus 206 ~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~~~~wvy~vgP~~Ga~l~~~f 275 (307)
+...|+.||+.+.+.+++.+++||++|||||||||+++++ +..|+++|+||+||++|++++..+
T Consensus 159 -----~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g-~~~~~~~wvy~vgP~~Ga~laa~~ 222 (231)
T PRK05420 159 -----AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG-GWALEQLWLFWVAPIVGAIIGGLI 222 (231)
T ss_pred -----CcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhC-CCCccceEEeehHHHHHHHHHHHH
Confidence 2368999999999999999999999999999999999974 223568999999999999764333
No 8
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=2.2e-43 Score=318.50 Aligned_cols=213 Identities=32% Similarity=0.499 Sum_probs=176.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHhhcc-cccCC-CCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHH
Q 021798 48 KSWSFYRAGIAEFIATFLFLYISVLTVMGV-VKSNT-KCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (307)
Q Consensus 48 ~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~-~~~~~-~~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~ 125 (307)
..++.+|++++||+|||+++|+++++.... ...++ +....+.+.+++++|+.+++.+++++++||+|+|||||+++++
T Consensus 13 ~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l 92 (250)
T PLN00166 13 FSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAI 92 (250)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 346788999999999999999999876542 11111 1112245678899999999999999999999999999999999
Q ss_pred hhcCccchhHHHHHhhhhhHHHHhHHHHhhcccccccccCCCcceecCCCCcCchhhHHHHHHHHHHHHHHHhccccccC
Q 021798 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (307)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~iL~~~il~~~~~~~~~ 205 (307)
.++++|.+.++|+++|++|+++|+.+++.+++.+.. ......++.+..++++.|+++|++|+++++...+++++.
T Consensus 93 ~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~ 167 (250)
T PLN00166 93 GGNITIITGFFYWIAQCLGSIVACLLLVFVTNGESV-----PTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKG 167 (250)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC-----cccccCCCCcHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 999999999999999999999999999988733211 112234566778999999999999999999876655432
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHcCCCCCCCcceeeecchHHHHHH
Q 021798 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVLDFLGGTIRWSW 271 (307)
Q Consensus 206 ~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~~~~wvy~vgP~~Ga~l 271 (307)
. ...+.|+.||+.+.+.++.++++||++||||||||||++.+ .|+++|+||+||++|+++
T Consensus 168 ~---~~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~---~~~~~wvywvgPi~Ga~~ 227 (250)
T PLN00166 168 S---LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG---DFSQIWIYWVGPLVGGAL 227 (250)
T ss_pred c---cccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC---CCcccchhhHHHHHHHHH
Confidence 1 12478999999999999999999999999999999999974 699999999999999976
No 9
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=1.9e-43 Score=319.77 Aligned_cols=212 Identities=29% Similarity=0.413 Sum_probs=176.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHhhcccc--cCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHH
Q 021798 48 KSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (307)
Q Consensus 48 ~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~ 125 (307)
..++++|++++||+|||+++|+++++..+... .+++....+.+.+++++|+++++.+++++++||+|+|||||+++++
T Consensus 17 ~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~ 96 (256)
T PLN00167 17 VTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAV 96 (256)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHH
Confidence 35678999999999999999999988764321 1111122346778999999999999999999999999999999999
Q ss_pred hhcCccchhHHHHHhhhhhHHHHhHHHHhhcccccccccCCCcceecCCCCcCchhhHHHHHHHHHHHHHHHhccccccC
Q 021798 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (307)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~iL~~~il~~~~~~~~~ 205 (307)
.|+++|.+.+.|+++|++|+++|+.+++.++..... ......++.+.+++++.|+++|++|+++++...|+|+..
T Consensus 97 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~-----~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~ 171 (256)
T PLN00167 97 GGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHV-----PTYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGL 171 (256)
T ss_pred hCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccc-----cccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccC
Confidence 999999999999999999999999999988732111 111223345667899999999999999999988876532
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHcCCCCCCCcceeeecchHHHHHH
Q 021798 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVLDFLGGTIRWSW 271 (307)
Q Consensus 206 ~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~~~~wvy~vgP~~Ga~l 271 (307)
.+...|+.||+.+.+.++..+++||++|||||||||+++++ .|+++|+||+||++|+++
T Consensus 172 ----~~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~---~~~~~wvywvgP~~Ga~l 230 (256)
T PLN00167 172 ----LGAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG---SFKNQAVYWVGPLLGGAV 230 (256)
T ss_pred ----CCCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc---CccCcEEEeHHHHHHHHH
Confidence 12468999999999999999999999999999999999974 689999999999999976
No 10
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=1.8e-43 Score=324.50 Aligned_cols=224 Identities=24% Similarity=0.347 Sum_probs=179.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhc
Q 021798 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (307)
Q Consensus 49 ~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~ 128 (307)
..+++|++++||+|||+|+|++++........ ....+.+.+++++|+++++.+++++++||+|+|||||+++++.++
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~---~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~ 143 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKY---DGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRH 143 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhcccc---CCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCC
Confidence 45688999999999999999998754321111 111245667899999999999999999999999999999999999
Q ss_pred CccchhHHHHHhhhhhHHHHhHHHHhhcccccccccCCCcceecCCCCcCchhhHHHHHHHHHHHHHHHhccccccCCCC
Q 021798 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDS 208 (307)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~iL~~~il~~~~~~~~~~~~ 208 (307)
++|.+.++||++|++|+++|+++++.++++ .. ..+. ..|+.+.+++++.|+++|++|+++++++.+++++.
T Consensus 144 ~~~~~~~~YiiaQilGAi~aa~~~~~~~~~-~~---~~g~--t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~--- 214 (298)
T PLN00026 144 FPWKHVPAYIAAQVSASICASFALKGVFHP-FM---SGGV--TVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAV--- 214 (298)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cc---cCce--eeecccHHHHHHHHHHHHHHHHHhheeeecCCCCc---
Confidence 999999999999999999999999999833 11 1222 23566788999999999999999998765443322
Q ss_pred CCCchhHHHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHcCCCCCCCcceeeecchHHHHHH----HHhhcCCCCCCch
Q 021798 209 HVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVLDFLGGTIRWSW----TRSFVPPSRDQSH 284 (307)
Q Consensus 209 ~~~~~~~~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~~~~wvy~vgP~~Ga~l----~~~f~~~~~~~~~ 284 (307)
....++.+|+++.+.+++.+++||++|||||||||+++.+ .|+++|+||+||++|+++ |..+....++++.
T Consensus 215 --~~~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~---~~~~~wVy~vaPilGAilga~ly~~~~~~~~~~~~ 289 (298)
T PLN00026 215 --GELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG---NYRAIWIYLVAPTLGALAGAGTYTAVKLREEDGDP 289 (298)
T ss_pred --CCccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC---CchheeHHHHHHHHHHHHHHHHHHHHhCccccccC
Confidence 1357899999999999999999999999999999999863 799999999999999865 4444334444444
Q ss_pred hhhhc
Q 021798 285 SLQMK 289 (307)
Q Consensus 285 ~~~~~ 289 (307)
+++.|
T Consensus 290 ~~~~~ 294 (298)
T PLN00026 290 PRPVR 294 (298)
T ss_pred hhhhh
Confidence 44433
No 11
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=9e-43 Score=315.42 Aligned_cols=212 Identities=32% Similarity=0.465 Sum_probs=174.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccc-cc-CCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHh
Q 021798 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVV-KS-NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLA 126 (307)
Q Consensus 49 ~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~-~~-~~~~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~ 126 (307)
.++.+|++++||++||+|+|+++++..... .. +.+....+.+.+++++|+++++.+++++++||+|+|||+|+++++.
T Consensus 16 ~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~ 95 (252)
T PLN00027 16 HPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIG 95 (252)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHh
Confidence 456889999999999999999998765321 11 1111123456789999999999999999999999999999999999
Q ss_pred hcCccchhHHHHHhhhhhHHHHhHHHHhhcccccccccCCCcceecCCCCcCchhhHHHHHHHHHHHHHHHhccccccCC
Q 021798 127 RKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSAR 206 (307)
Q Consensus 127 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~iL~~~il~~~~~~~~~~ 206 (307)
|+++|.+.++|+++|++|+++|+.+++.+.+... .+.....++.+.+++++.|+++|++|+++++....++++..
T Consensus 96 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~ 170 (252)
T PLN00027 96 GNITLLRGILYWIAQLLGSVVACLLLKFSTGGLE-----TSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGD 170 (252)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-----cccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccCC
Confidence 9999999999999999999999999987763211 12233455677889999999999999999998753333211
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHcCCCCCCCcceeeecchHHHHHH
Q 021798 207 DSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVLDFLGGTIRWSW 271 (307)
Q Consensus 207 ~~~~~~~~~~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~~~~wvy~vgP~~Ga~l 271 (307)
...+.|+.+|+.+...+++++++||++|||||||||+++.+ .|+++||||+||++|+++
T Consensus 171 ---~~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~---~~~~~wvy~vgP~~Ga~l 229 (252)
T PLN00027 171 ---LGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW---TWTNHWVYWAGPLIGGGI 229 (252)
T ss_pred ---ccchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh---cchhhhHHHHHHHHHHHH
Confidence 12478999999999999999999999999999999999974 699999999999999975
No 12
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=4.1e-42 Score=314.24 Aligned_cols=207 Identities=26% Similarity=0.399 Sum_probs=173.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhc
Q 021798 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (307)
Q Consensus 49 ~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~ 128 (307)
.++++|++++||+|||+|+|++++++......+ ...+.+.+++++|+++++.+++++++||||+|||||+++++.++
T Consensus 38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~---~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~ 114 (283)
T PLN00182 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYG---GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRR 114 (283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC---CCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcC
Confidence 356889999999999999999998765322211 12245677889999999999999999999999999999999999
Q ss_pred CccchhHHHHHhhhhhHHHHhHHHHhhcccccccccCCCcceecCCCCcCchhhHHHHHHHHHHHHHHHhccccccCCCC
Q 021798 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDS 208 (307)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~iL~~~il~~~~~~~~~~~~ 208 (307)
++|.+.++|+++|++|+++|+++++.+++.. ..+.....|+.+.+++++.|+++|++|+++++.+.++++..
T Consensus 115 ~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~-----~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~--- 186 (283)
T PLN00182 115 FPWYQVPLYIGAQLTGSLLASLTLRLMFNVT-----PEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRAV--- 186 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----ccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheeccccC---
Confidence 9999999999999999999999999988321 11222234456778999999999999999999876544321
Q ss_pred CCCchhHHHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHcCCCCCCCcceeeecchHHHHHH
Q 021798 209 HVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVLDFLGGTIRWSW 271 (307)
Q Consensus 209 ~~~~~~~~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~~~~wvy~vgP~~Ga~l 271 (307)
+...++.+|+++.+.+++.+++||++|||||+|||+++.+ .|+++|+||+||++|+++
T Consensus 187 --~~~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~---~~~~~wvY~vap~lGA~l 244 (283)
T PLN00182 187 --GELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG---RYKGIWVYIVGPFVGIIA 244 (283)
T ss_pred --CcchhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc---cccceeHHHHHHHHHHHH
Confidence 2357899999999999999999999999999999999864 699999999999999865
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=4.3e-40 Score=299.96 Aligned_cols=238 Identities=26% Similarity=0.323 Sum_probs=184.4
Q ss_pred chhHHhhhhhhhhhccccccCCCCCCCCCC-CCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHH
Q 021798 15 FAERQPIGTAAQTQDGKDYVEPPPAPLFEP-GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIA 93 (307)
Q Consensus 15 y~~aQ~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~ 93 (307)
-..-|+.|.........+..+. .+.++- ...-+.+.+|++++||++||+++|+++++........ ...+.+.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~---~~~~~~~~a 82 (274)
T PLN00183 8 RDVDQEAGSTASTLNGDDHPKR--QRLFGCLPYDMDLNPARMVLAEMVGTFILMFCVCGIIASTQLSG---GEVGLLEYA 82 (274)
T ss_pred hhhhhhhcCCCCcccCCCCchh--hhhccccCCcCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccC---CccchHHHH
Confidence 3445777776665543322221 111111 1112346789999999999999999988765322211 123456678
Q ss_pred HHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhcccccccccCCCcceecC
Q 021798 94 WAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAH 173 (307)
Q Consensus 94 ~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~ 173 (307)
+++|+.+++.+++++++||+|+|||+|+++++.++++|.+.++||++|++|+++|+.+++.+++... +.....|
T Consensus 83 l~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~------~~~~~~p 156 (274)
T PLN00183 83 ATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGVKA------DLMTTKP 156 (274)
T ss_pred HHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------ccccCCC
Confidence 8999999999999999999999999999999999999999999999999999999999998884321 1122234
Q ss_pred CCCcCchhhHHHHHHHHHHHHHHHhccccccCCCCCCCchhHHHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHcCCCC
Q 021798 174 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDR 253 (307)
Q Consensus 174 ~~~~~~~~~~E~~~T~iL~~~il~~~~~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~ 253 (307)
..+.+++++.|+++|++|+++++...+++++. +...++.+|+.+.+.+++.+++||++|||||+|+|+++.+
T Consensus 157 ~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~-----~~~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~~--- 228 (274)
T PLN00183 157 AQGCSSAFWVEFIATFIVMFLAASLTSQPQSL-----GHLSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSW--- 228 (274)
T ss_pred cccHHHHHHHHHHHHHHHHHhhheeeccccCC-----CCceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhCC---
Confidence 44567899999999999999999887765322 2356899999999999999999999999999999999853
Q ss_pred CCCcceeeecchHHHHHH
Q 021798 254 GWDDHVLDFLGGTIRWSW 271 (307)
Q Consensus 254 ~~~~~wvy~vgP~~Ga~l 271 (307)
.|+++|+||+||++|+++
T Consensus 229 ~~~~~wvy~vapilGail 246 (274)
T PLN00183 229 DFKDIWIYITAPTIGAVA 246 (274)
T ss_pred ChhheehHHHHHHHHHHH
Confidence 799999999999999976
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=8.1e-40 Score=292.78 Aligned_cols=216 Identities=40% Similarity=0.604 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCccch
Q 021798 54 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTR 133 (307)
Q Consensus 54 r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~~~~ 133 (307)
|++++||+|||+++++++++..+...+++ ...+.+.+++++|+.+.+.+++++++||+|+|||+|+++++.++++|.+
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~--~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~ 78 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGG--ASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIR 78 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCC--CCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHH
Confidence 56899999999999999988765433221 1234566789999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhhhHHHHhHHHHhhcccccccccCCCc--------ceecCCCCcCchhhHHHHHHHHHHHHHHHhccccccC
Q 021798 134 ALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGA--------NVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (307)
Q Consensus 134 ~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~E~~~T~iL~~~il~~~~~~~~~ 205 (307)
.++|+++|++|+++|+.+++.+++ +.++..+... +.+.++.+..++++.|+++|++|+++++...++++..
T Consensus 79 ~~~y~~aq~~Ga~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~ 157 (228)
T cd00333 79 VIPYIIAQLLGAILGAALLYGLYY-GLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGP 157 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH-HHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccC
Confidence 999999999999999999999883 3333222111 2234556778999999999999999999988765531
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHcCCCCCCCcceeeecchHHHHHHHHhh
Q 021798 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVLDFLGGTIRWSWTRSF 275 (307)
Q Consensus 206 ~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~~~~wvy~vgP~~Ga~l~~~f 275 (307)
. .....|+.+|+.+.+.++.+++.||+++||||||+|+++.+....|+++|+||++|++|++++..+
T Consensus 158 ~---~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l 224 (228)
T cd00333 158 P---PGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALV 224 (228)
T ss_pred C---CCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHH
Confidence 1 124689999999999999999999999999999999998642236999999999999999875443
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=4e-39 Score=286.06 Aligned_cols=213 Identities=38% Similarity=0.633 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHHHHHhhcccccCC-CCC-ccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCccchhH
Q 021798 58 AEFIATFLFLYISVLTVMGVVKSNT-KCS-TVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRAL 135 (307)
Q Consensus 58 aEf~gT~~lv~~~~~~~~~~~~~~~-~~~-~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~~~~~~ 135 (307)
+||+||++++|+++++.......+. +.. ..+...+++++|+.+++.+++++++||+|+|||+|+++++.++++|.+.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 5999999999999988765332211 111 11456779999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHhHHHHhhcccccccccCCCcceecCCCCcCchhhHHHHHHHHHHHHHHHhccccccCCCCCCCchhH
Q 021798 136 FYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP 215 (307)
Q Consensus 136 ~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~iL~~~il~~~~~~~~~~~~~~~~~~~ 215 (307)
+|+++|++|+++|+.+++.++.+ .++..........++.+.+++++.|+++|++|+++++...+++++... ....|
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~---~~~~~ 156 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSG-LFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPR---GGFAP 156 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccc-cccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCC---CccHH
Confidence 99999999999999999998833 321111111122345677899999999999999999988776543221 13689
Q ss_pred HHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHcCCCCCCCcceeeecchHHHHHHHHhh
Q 021798 216 LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVLDFLGGTIRWSWTRSF 275 (307)
Q Consensus 216 ~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~~~~wvy~vgP~~Ga~l~~~f 275 (307)
+.+|+.+.+.+...++.||+++||||+|+|+++.+ ...|+++|+||++|++|++++..+
T Consensus 157 ~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~-~~~~~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 157 LAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAG-LAGWGNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred HHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhc-cccccceeHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999863 347999999999999999886543
No 16
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.77 E-value=1.4e-18 Score=159.28 Aligned_cols=131 Identities=23% Similarity=0.275 Sum_probs=101.8
Q ss_pred chhHHhhhhhhhhhccccccCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHHH
Q 021798 15 FAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAW 94 (307)
Q Consensus 15 y~~aQ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~ 94 (307)
|+.+|++|+.+++..++...+......... ....+.++++++||++|++|++++++.... .. .. +. ..++
T Consensus 123 Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~--~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~-~~---~~---~~-~~~l 192 (283)
T PLN00182 123 YIGAQLTGSLLASLTLRLMFNVTPEAFFGT--TPTDSSGQALVAEIIISFLLMFVISGVATD-SR---AV---GE-LAGI 192 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccceeeC--CCCcchHHHHHHHHHHHHHHHHHHHhheec-cc---cC---Cc-chhH
Confidence 999999999999987665543221111111 112357899999999999999988764321 11 11 11 2478
Q ss_pred HHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhc
Q 021798 95 AFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (307)
Q Consensus 95 ~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~ 156 (307)
++|+.+++.++..+++||+|+|||+|+++++.++ .|.++|+||++|++|+++|+++++.+.
T Consensus 193 ~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~-~~~~~wvY~vap~lGA~lgally~~l~ 253 (283)
T PLN00182 193 AVGMTIILNVFVAGPISGASMNPARSLGPAIVMG-RYKGIWVYIVGPFVGIIAGGFVYNLIR 253 (283)
T ss_pred HHHHHHHHHHHHccccCccccChHHHHHHHHHhc-cccceeHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999765 589999999999999999999998886
No 17
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.75 E-value=3.2e-18 Score=153.25 Aligned_cols=134 Identities=22% Similarity=0.131 Sum_probs=102.2
Q ss_pred chhHHhhhhhhhhhccccccCCCCCCCC----------CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCC
Q 021798 15 FAERQPIGTAAQTQDGKDYVEPPPAPLF----------EPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKC 84 (307)
Q Consensus 15 y~~aQ~~g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~ 84 (307)
|+.+|++|+.+++...+...++...... ......+.+.+|.++.|+++|++++++++...... +. .
T Consensus 82 y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~--~~--~ 157 (228)
T cd00333 82 YIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDP--NG--P 157 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHcccc--cc--C
Confidence 9999999999998876544332111100 01112234688999999999999999887654211 11 0
Q ss_pred CccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcC--ccchhHHHHHhhhhhHHHHhHHHHh
Q 021798 85 STVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKL--SLTRALFYMVMQCLGAICGAGVVKG 154 (307)
Q Consensus 85 ~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~--~~~~~~~yi~aQ~lGa~~ga~~~~~ 154 (307)
......++.+|+.+...++..+++||+|+|||+++++++.++. +|.+.|+||++|++|+++|+++++.
T Consensus 158 --~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 158 --PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred --CCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHh
Confidence 1122357889999999999999999999999999999999987 7999999999999999999987653
No 18
>PLN00026 aquaporin NIP; Provisional
Probab=99.75 E-value=4.4e-18 Score=156.76 Aligned_cols=130 Identities=25% Similarity=0.302 Sum_probs=101.8
Q ss_pred chhHHhhhhhhhhhccccccCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHHH
Q 021798 15 FAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAW 94 (307)
Q Consensus 15 y~~aQ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~ 94 (307)
|+++|++|+++++...+...++...... .....+.++.++.||++||+|+++++.+.. ... . .+. ..++
T Consensus 152 YiiaQilGAi~aa~~~~~~~~~~~~~g~---t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~-~~~--~----~~~-~~~l 220 (298)
T PLN00026 152 YIAAQVSASICASFALKGVFHPFMSGGV---TVPSVSTGQAFALEFIITFNLLFVVTAVAT-DTR--A----VGE-LAGI 220 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccCce---eeecccHHHHHHHHHHHHHHHHHhheeeec-CCC--C----cCC-ccch
Confidence 9999999999999887766544211100 112346789999999999999998764321 111 1 111 1368
Q ss_pred HHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhc
Q 021798 95 AFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (307)
Q Consensus 95 ~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~ 156 (307)
++|+.+++.++..+++||+|+|||+|+++++.++ +|...|+||++|++||++|++++..+.
T Consensus 221 ~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~-~~~~~wVy~vaPilGAilga~ly~~~~ 281 (298)
T PLN00026 221 AVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG-NYRAIWIYLVAPTLGALAGAGTYTAVK 281 (298)
T ss_pred HHHHHHHHHHHHhcccCccccChHHHHHHHHhcC-CchheeHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999876 799999999999999999999987765
No 19
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.74 E-value=1.1e-17 Score=152.94 Aligned_cols=133 Identities=23% Similarity=0.289 Sum_probs=101.9
Q ss_pred chhHHhhhhhhhhhccccccCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHHH
Q 021798 15 FAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAW 94 (307)
Q Consensus 15 y~~aQ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~ 94 (307)
|+.+|++|+.+++...+........ ..... ...+.+++++.|+++|+++++++++..... .+. +. ..++
T Consensus 126 Yi~aQ~lGa~~ga~l~~~~~~~~~~-~~~~~--p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~----~~~---~~-~~~l 194 (274)
T PLN00183 126 YITAQTVGSVLATYVGVSVYGVKAD-LMTTK--PAQGCSSAFWVEFIATFIVMFLAASLTSQP----QSL---GH-LSGF 194 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcc-cccCC--CcccHHHHHHHHHHHHHHHHHhhheeeccc----cCC---CC-ceeh
Confidence 9999999999999876554433211 11111 112457899999999999999887654321 111 11 1267
Q ss_pred HHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhcccc
Q 021798 95 AFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG 159 (307)
Q Consensus 95 ~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~ 159 (307)
.+|+.+++.+++.+++||+|+|||+|+++++.+ .+|.+.|+||++|++|+++|+.+++.++.+.
T Consensus 195 ~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~-~~~~~~wvy~vapilGailaa~l~~~l~~~~ 258 (274)
T PLN00183 195 VIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS-WDFKDIWIYITAPTIGAVAGALMFHLLRLRT 258 (274)
T ss_pred HHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-CChhheehHHHHHHHHHHHHHHHHHHHhccC
Confidence 889999999999999999999999999999986 5799999999999999999999999987443
No 20
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.73 E-value=4e-18 Score=152.08 Aligned_cols=136 Identities=20% Similarity=0.158 Sum_probs=108.9
Q ss_pred cchhHHhhhhhhhhhccccccCCC--CCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhH
Q 021798 14 KFAERQPIGTAAQTQDGKDYVEPP--PAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (307)
Q Consensus 14 ~y~~aQ~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (307)
=|+.+|++|+++++..+|...+++ .............+.++.++.|++.||.++|.+++.... .+.+ ..
T Consensus 91 ~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d-----~~~~----~~ 161 (238)
T KOG0223|consen 91 AYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATD-----PRRS----EL 161 (238)
T ss_pred HHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeec-----CCCc----cc
Confidence 499999999999999999888774 111112222334567899999999999999987643321 1111 33
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhcccc
Q 021798 92 IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG 159 (307)
Q Consensus 92 i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~ 159 (307)
.++.+|+++.+.++..+++||++||||+++++++..+. |..+|+||++|++|++++++++..++.++
T Consensus 162 a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~-w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 162 APLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGS-WDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred HHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcC-CCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 48899999999999999999999999999999998875 99999999999999999999999988333
No 21
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.71 E-value=3.8e-17 Score=145.13 Aligned_cols=131 Identities=23% Similarity=0.209 Sum_probs=99.2
Q ss_pred chhHHhhhhhhhhhccccccCCCCC-CC-CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHH
Q 021798 15 FAERQPIGTAAQTQDGKDYVEPPPA-PL-FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (307)
Q Consensus 15 y~~aQ~~g~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i 92 (307)
|+.+|++|+.+++...+...++... +. .........+.++.++.|+++|++++++++..... .+ +... + ...
T Consensus 82 y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~--~~--~~~~-~-~~~ 155 (216)
T TIGR00861 82 YIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDP--RN--RVPR-G-GFA 155 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecC--CC--CCCC-C-ccH
Confidence 9999999999999877655543211 10 01111123467899999999999999988754321 11 1111 1 135
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhh-cCccchhHHHHHhhhhhHHHHhHH
Q 021798 93 AWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR-KLSLTRALFYMVMQCLGAICGAGV 151 (307)
Q Consensus 93 ~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g-~~~~~~~~~yi~aQ~lGa~~ga~~ 151 (307)
++.+|+.++..++..+++||+|+|||+++++++.+ ..+|.+.|+||++|++|+++++.+
T Consensus 156 ~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 156 PLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred HHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999976 478999999999999999999875
No 22
>PLN00184 aquaporin NIP1; Provisional
Probab=99.67 E-value=3.7e-16 Score=144.25 Aligned_cols=134 Identities=23% Similarity=0.252 Sum_probs=100.4
Q ss_pred chhHHhhhhhhhhhccccccCCCCCCCCCC-----CCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccch
Q 021798 15 FAERQPIGTAAQTQDGKDYVEPPPAPLFEP-----GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGI 89 (307)
Q Consensus 15 y~~aQ~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~ 89 (307)
|+++|++|+++++..++...........+. ......+.++.++.|+++||+|++.+++.... ++ .. +
T Consensus 135 YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~---~~-~~---~- 206 (296)
T PLN00184 135 YVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATD---NR-AI---G- 206 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheecc---Cc-CC---C-
Confidence 999999999999987655443211000000 01112367899999999999999988764321 11 11 1
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhcc
Q 021798 90 QGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (307)
Q Consensus 90 ~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 157 (307)
...++.+|+.+++.++..+++||+++|||+++++++... .|+.+|+||++|++|+++|++++..+..
T Consensus 207 ~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~-~~~~~WVy~vgPilGa~laal~y~~l~~ 273 (296)
T PLN00184 207 ELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG-CYKGIWIYIVAPTLGAIAGAWVYNTVRY 273 (296)
T ss_pred cchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh-cccccchHHhHHHHHHHHHHHHHHHHhc
Confidence 123788999999999999999999999999999999755 5789999999999999999999888763
No 23
>PLN00166 aquaporin TIP2; Provisional
Probab=99.61 E-value=6e-15 Score=133.53 Aligned_cols=133 Identities=17% Similarity=0.180 Sum_probs=101.6
Q ss_pred chhHHhhhhhhhhhccccccCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHHH
Q 021798 15 FAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAW 94 (307)
Q Consensus 15 y~~aQ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~ 94 (307)
|+.+|++|+++++...+........+.. ....+.+.++.++.|+++||+|++..+...... + +. .. ....++
T Consensus 104 y~~aq~lGa~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~--~--~~-~~-~~~~p~ 175 (250)
T PLN00166 104 YWIAQCLGSIVACLLLVFVTNGESVPTH--GVAAGLGAIEGVVMEIVVTFALVYTVYATAADP--K--KG-SL-GTIAPI 175 (250)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCccc--ccCCCCcHHHHHHHHHHHHHHHHHHHHHhcccc--c--cc-cc-ccchhH
Confidence 9999999999999877655433211111 111234678999999999999999887643211 1 00 00 112478
Q ss_pred HHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhc
Q 021798 95 AFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (307)
Q Consensus 95 ~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~ 156 (307)
.+|+.++..+...++.||+.+|||+++++++..+ +|...|+||++|++|+++++++++.++
T Consensus 176 ~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~-~~~~~wvywvgPi~Ga~~aa~~y~~l~ 236 (250)
T PLN00166 176 AIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG-DFSQIWIYWVGPLVGGALAGLIYGDVF 236 (250)
T ss_pred HHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC-CCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999765 588999999999999999999987776
No 24
>PLN00027 aquaporin TIP; Provisional
Probab=99.59 E-value=1e-14 Score=132.37 Aligned_cols=133 Identities=18% Similarity=0.162 Sum_probs=100.5
Q ss_pred chhHHhhhhhhhhhccccccCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHHH
Q 021798 15 FAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAW 94 (307)
Q Consensus 15 y~~aQ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~ 94 (307)
|+.+|++|+.+++...+............. ....+.++.++.|+++||++++.+...... .++. ..+ ...++
T Consensus 106 yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~-~~~~----~~~-~~~p~ 177 (252)
T PLN00027 106 YWIAQLLGSVVACLLLKFSTGGLETSAFSL--SSGVGVWNAFVFEIVMTFGLVYTVYATAVD-PKKG----DLG-IIAPI 177 (252)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccC--CCCccHHHHHHHHHHHHHHHHHHHHHhccc-cccC----Ccc-chHHH
Confidence 999999999999987654432211111111 123467899999999999999987654321 1110 111 13478
Q ss_pred HHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhc
Q 021798 95 AFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (307)
Q Consensus 95 ~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~ 156 (307)
.+|+.+....+..++.||+.+|||+++++++... .|..+|+||++|++|+++|+.+++.++
T Consensus 178 ~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~-~~~~~wvy~vgP~~Ga~laa~~y~~l~ 238 (252)
T PLN00027 178 AIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWTNHWVYWAGPLIGGGIAGLVYELIF 238 (252)
T ss_pred HHHHHHHHHHHhcccccccccCcchhHHHHHHhh-cchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 8899998889999999999999999999999875 588999999999999999999988887
No 25
>PRK05420 aquaporin Z; Provisional
Probab=99.59 E-value=6.4e-15 Score=132.00 Aligned_cols=134 Identities=18% Similarity=0.211 Sum_probs=99.7
Q ss_pred cchhHHhhhhhhhhhccccccCCCCC-CC---------CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCC
Q 021798 14 KFAERQPIGTAAQTQDGKDYVEPPPA-PL---------FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK 83 (307)
Q Consensus 14 ~y~~aQ~~g~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~ 83 (307)
-|+.+|++|+++++..++...+++.. +. .........+..+.++.|+++|++|++..+.... .. +
T Consensus 83 ~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~~--~~---~ 157 (231)
T PRK05420 83 PYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGATD--KR---A 157 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHhC--CC---C
Confidence 39999999999999776654432110 00 0001112336789999999999999998775432 11 1
Q ss_pred CCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhc-CccchhHHHHHhhhhhHHHHhHHHHhhc
Q 021798 84 CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK-LSLTRALFYMVMQCLGAICGAGVVKGFM 156 (307)
Q Consensus 84 ~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~-~~~~~~~~yi~aQ~lGa~~ga~~~~~~~ 156 (307)
.. + ..++.+|+.+.......++.||+.+|||+++++++..+ .++..+|+||++|++|+++++.+++.++
T Consensus 158 ~~--~--~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~ 227 (231)
T PRK05420 158 PA--G--FAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLL 227 (231)
T ss_pred CC--c--chHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHh
Confidence 11 1 24788999999999999999999999999999998643 4456899999999999999999988776
No 26
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.55 E-value=1.9e-14 Score=128.67 Aligned_cols=131 Identities=23% Similarity=0.223 Sum_probs=98.1
Q ss_pred chhHHhhhhhhhhhccccccCCC--CCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHH
Q 021798 15 FAERQPIGTAAQTQDGKDYVEPP--PAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (307)
Q Consensus 15 y~~aQ~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i 92 (307)
|+.+|++|+.+++...+...++. .............+.++.++.|+++|+++++........ .+. . ..+. ..
T Consensus 95 Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~--~~~--~-~~~~-~~ 168 (227)
T PF00230_consen 95 YIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADD--KRK--F-PLGP-LA 168 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTST--TSS--S-TSSG-GH
T ss_pred EEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccc--ccc--c-cccc-cc
Confidence 99999999999998876666542 112111122234467899999999999999877654321 111 1 1111 24
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCccchhHHHHHhhhhhHHHHhHHH
Q 021798 93 AWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV 152 (307)
Q Consensus 93 ~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~ 152 (307)
++.+|+.+.+..+..++.||+.+|||++++..+.... |...|+||+++++|+++|++++
T Consensus 169 p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~-~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 169 PLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGI-WDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH-HTTTTHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEeecccccccccccccCchhhcCceeeccc-CCeEEEEEehHHHHHHHHHhhC
Confidence 7888988888888889999999999999999998765 9999999999999999998764
No 27
>PLN00167 aquaporin TIP5; Provisional
Probab=99.55 E-value=2.3e-14 Score=130.14 Aligned_cols=137 Identities=18% Similarity=0.112 Sum_probs=101.8
Q ss_pred cchhHHhhhhhhhhhccccccCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHH
Q 021798 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIA 93 (307)
Q Consensus 14 ~y~~aQ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~ 93 (307)
-|+.+|++|+++++...+........+.... ....+.++.++.|+++|+++++..+.... ... .... ...+
T Consensus 107 ~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~--~~~~s~~~~~~~E~i~T~~L~~~i~~~~~--~~~-~~~~----~~~p 177 (256)
T PLN00167 107 FYWISQMLASVMACLFLKVTTVGQHVPTYKI--AEEMTGFGASVLEGVLTFGLVYTVYAAGD--PRR-GLLG----AIGP 177 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccccc--CcccchHHHHHHHHHHHHHHHHHHHHhcc--ccc-cCCC----Ccch
Confidence 3999999999999987765543321111111 11235678999999999999988764321 111 1111 1237
Q ss_pred HHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhccccc
Q 021798 94 WAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQ 160 (307)
Q Consensus 94 ~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~ 160 (307)
+.+|+.++...+..++.||+.+|||+++++.+..+ +|...|+||++|++|+++++.++..++.++.
T Consensus 178 l~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~-~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~~ 243 (256)
T PLN00167 178 LAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG-SFKNQAVYWVGPLLGGAVAGLLYDNVVFPTQ 243 (256)
T ss_pred HHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc-CccCcEEEeHHHHHHHHHHHHHHHHHhCCCc
Confidence 88899999999999999999999999999999765 5888899999999999999999988874443
No 28
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.55 E-value=1.9e-14 Score=133.11 Aligned_cols=137 Identities=18% Similarity=0.134 Sum_probs=98.1
Q ss_pred chhHHhhhhhhhhhccccccCCCC--------------CCCCCC-CCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 021798 15 FAERQPIGTAAQTQDGKDYVEPPP--------------APLFEP-GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK 79 (307)
Q Consensus 15 y~~aQ~~g~~~~~~~~~~~~~~~~--------------~~~~~~-~~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~ 79 (307)
|+++|++|+++++..++...++.. ....+. ......+..+.++.|+++||+|++.++.... ..
T Consensus 131 YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila~~d--~~ 208 (294)
T PTZ00016 131 YFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILAITD--PN 208 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHHhcc--Cc
Confidence 999999999999988754432200 000000 0011346789999999999999998775431 11
Q ss_pred cCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhh-----cCccc----hhHHHHHhhhhhHHHHhH
Q 021798 80 SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR-----KLSLT----RALFYMVMQCLGAICGAG 150 (307)
Q Consensus 80 ~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g-----~~~~~----~~~~yi~aQ~lGa~~ga~ 150 (307)
+.. ..+ ..++++|+.+.++....++.||+.+|||+++++++.. +..|. ..|+||+++++|+++|++
T Consensus 209 ~~~---~~~--~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aal 283 (294)
T PTZ00016 209 NCP---AFN--YLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMF 283 (294)
T ss_pred cCC---CcC--cccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHHHHH
Confidence 111 011 2377889888888888999999999999999999863 33454 489999999999999999
Q ss_pred HHHhhccc
Q 021798 151 VVKGFMGA 158 (307)
Q Consensus 151 ~~~~~~~~ 158 (307)
+++.+.++
T Consensus 284 ly~~ll~~ 291 (294)
T PTZ00016 284 LYDKFIPP 291 (294)
T ss_pred HHHHHhCC
Confidence 98887743
No 29
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.50 E-value=1.1e-13 Score=123.32 Aligned_cols=135 Identities=20% Similarity=0.161 Sum_probs=99.0
Q ss_pred cchhHHhhhhhhhhhccccccCCCCC-------CCCC--CCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCC
Q 021798 14 KFAERQPIGTAAQTQDGKDYVEPPPA-------PLFE--PGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKC 84 (307)
Q Consensus 14 ~y~~aQ~~g~~~~~~~~~~~~~~~~~-------~~~~--~~~~~~~~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~ 84 (307)
.|+.+|++|+++++..+..+..+... ...+ ..+....+..+.++.|+++||+|++.+.+... .+ +.
T Consensus 88 ~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~---~~--~~ 162 (241)
T COG0580 88 PYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTD---DG--NA 162 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhc---cC--cc
Confidence 49999999999999876444333211 1111 12222346789999999999999998776432 01 00
Q ss_pred CccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhc----Ccc----chhHHHHHhhhhhHHHHhHHHHhhc
Q 021798 85 STVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK----LSL----TRALFYMVMQCLGAICGAGVVKGFM 156 (307)
Q Consensus 85 ~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~----~~~----~~~~~yi~aQ~lGa~~ga~~~~~~~ 156 (307)
+.+ ..++.+|+.++.+..+.++.||..+|||+++++.+... .+- ...|+||++|++|+++|+++...++
T Consensus 163 -~~~--~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~ 239 (241)
T COG0580 163 -NAG--FAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLL 239 (241)
T ss_pred -ccc--chHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHc
Confidence 111 33789999999999999999999999999999998322 111 4799999999999999999998765
No 30
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=98.83 E-value=2.6e-09 Score=96.96 Aligned_cols=124 Identities=23% Similarity=0.194 Sum_probs=84.7
Q ss_pred cCchhhHHHHHHHHHHHHHHHhccccccCCC-CCCCchhHHHHHHHHHHHHHHhhcCCcCccchhhhHHHHHHcCCCCCC
Q 021798 177 KGDGLGAEIIGTFVLVYTVFSATDAKRSARD-SHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGW 255 (307)
Q Consensus 177 ~~~~~~~E~~~T~iL~~~il~~~~~~~~~~~-~~~~~~~~~~igl~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~ 255 (307)
..+.++.|+++|++|++.=+++.-...-.+. .+.-.-..+..|++++..+++.+..||+.+|||.+|+..++ +.-.|
T Consensus 31 l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~--g~~p~ 108 (316)
T KOG0224|consen 31 LLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCIL--GRLPW 108 (316)
T ss_pred HHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHh--cCCCh
Confidence 3577999999999998865543322211111 11123446788999999999999999999999999999987 45789
Q ss_pred CcceeeecchHHHHHH-----HHhhc---CCCCCCchhhhhccccceeeeccCCc
Q 021798 256 DDHVLDFLGGTIRWSW-----TRSFV---PPSRDQSHSLQMKLIASSTFVIAPAF 302 (307)
Q Consensus 256 ~~~wvy~vgP~~Ga~l-----~~~f~---~~~~~~~~~~~~~~~~~~~f~~~p~~ 302 (307)
...-+|.+++++||.+ +..++ .+.+.-++...=--...++|+|.|++
T Consensus 109 ~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p 163 (316)
T KOG0224|consen 109 KKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAP 163 (316)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCch
Confidence 9999999999999854 22222 22222222221111256899999975
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=79.09 E-value=52 Score=30.19 Aligned_cols=144 Identities=16% Similarity=0.108 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCc
Q 021798 51 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLS 130 (307)
Q Consensus 51 ~~~r~~~aEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~ 130 (307)
..+++.++-+.-++-+++..... . ..+....+...+.-++.+++.+...++..+..-=+ |--........++++
T Consensus 30 ~~l~ai~AG~~i~lg~~~~~~~~---~-~~~~~~~~~~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~Is 103 (265)
T COG2116 30 LLLLAILAGAFIGLGFLFYITVG---T-GLPGAPGGLAKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKIS 103 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc---c-cCCCCCcchHHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCcc
Confidence 45666666655555544433211 1 11111122234444666666666666654332111 222223334578889
Q ss_pred cchhHHHHHhhhhhHHHHhHHHHhhcccccccccCCCcc-----eec---CCCCcCchhhHHHHHHHHHHHHHHHhcc
Q 021798 131 LTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAN-----VVA---HGYTKGDGLGAEIIGTFVLVYTVFSATD 200 (307)
Q Consensus 131 ~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~E~~~T~iL~~~il~~~~ 200 (307)
|++.+--|+--.+|=++|++++-.++.-........+.. ... -+.+..+.|+-=.++.++.++.++..-.
T Consensus 104 ~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~~~ 181 (265)
T COG2116 104 WGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANGQWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMSYS 181 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccchhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888877777777777777766655441111111111111 011 1234467777778888888888876543
No 32
>PRK10805 formate transporter; Provisional
Probab=65.68 E-value=1.1e+02 Score=28.24 Aligned_cols=103 Identities=14% Similarity=0.165 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHhcC-CCCcccChHHHHHHHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhc-ccccccccCCC---
Q 021798 93 AWAFGGMIFVLVYCTAG-ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM-GAGQYGRLAGG--- 167 (307)
Q Consensus 93 ~~~~g~~v~~~i~~~~~-iSG~h~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~-~~~~~~~~~~~--- 167 (307)
++.+.+.+.+.+..-+. .|| |-..+++ .+.+|.+|.+.+-.|.-=.+|=++|++++-.+. .........+.
T Consensus 72 ~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~~~~ 147 (285)
T PRK10805 72 GICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGL 147 (285)
T ss_pred HHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccHHHH
Confidence 45555555555554333 343 5554433 567888888877444444444444444433222 01111110000
Q ss_pred -ccee---cCCCCcCchhhHHHHHHHHHHHHHHHhc
Q 021798 168 -ANVV---AHGYTKGDGLGAEIIGTFVLVYTVFSAT 199 (307)
Q Consensus 168 -~~~~---~~~~~~~~~~~~E~~~T~iL~~~il~~~ 199 (307)
.... .-+.+.++.|+-=++|.++.++.++...
T Consensus 148 ~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~~~ 183 (285)
T PRK10805 148 NVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSY 183 (285)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001 1124556778888888898888887544
No 33
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=62.40 E-value=1.1e+02 Score=27.56 Aligned_cols=110 Identities=18% Similarity=0.127 Sum_probs=60.4
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhccc-ccccccCCC
Q 021798 89 IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGA-GQYGRLAGG 167 (307)
Q Consensus 89 ~~~i~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~-~~~~~~~~~ 167 (307)
.+..++.+++.+...+..-+..-=+ |-.......+.|+.+|++.+--|.-=.+|=++|+.++-.+... .... +.+
T Consensus 57 ~l~~g~~F~~Gl~lIv~~g~eLfTg--n~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~--~~~ 132 (250)
T PF01226_consen 57 KLVGGLVFPIGLVLIVFLGGELFTG--NMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFM--SSP 132 (250)
T ss_dssp HHHHHHHHTHHHHHHHHHT---TTT--TCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGG--TTT
T ss_pred HHHHHHHHHHHHHHHHHhcchhccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc--ccH
Confidence 3444566666666566544332112 5555556667888898887766666666666666655444311 1111 000
Q ss_pred c-----ce---ecCCCCcCchhhHHHHHHHHHHHHHHHhcccc
Q 021798 168 A-----NV---VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 202 (307)
Q Consensus 168 ~-----~~---~~~~~~~~~~~~~E~~~T~iL~~~il~~~~~~ 202 (307)
. .. ..-+.+.++.|+.=+++.++..+.++.....|
T Consensus 133 ~~~~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~~~~~ 175 (250)
T PF01226_consen 133 AMGEYLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLAFAAK 175 (250)
T ss_dssp HHHHHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHHCT-S
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0 00 01234557778888889999998888765433
No 34
>PRK11562 nitrite transporter NirC; Provisional
Probab=52.41 E-value=1.9e+02 Score=26.55 Aligned_cols=106 Identities=11% Similarity=0.088 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHhcCC-CCcccChHHHHHHHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhccc--ccccccCCCc
Q 021798 92 IAWAFGGMIFVLVYCTAGI-SGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGA--GQYGRLAGGA 168 (307)
Q Consensus 92 i~~~~g~~v~~~i~~~~~i-SG~h~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~--~~~~~~~~~~ 168 (307)
.+..+++.+.+.++.-+.. || |=.......+.|+.+|++.+--|.-=.+|=++|++++-.++.. ..........
T Consensus 61 ~g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~~~ 137 (268)
T PRK11562 61 MGATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSI 137 (268)
T ss_pred HHHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHH
Confidence 3455565555555543321 22 4333334566788888887777766666666666665444311 0011000000
Q ss_pred -cee---cCCCCcCchhhHHHHHHHHHHHHHHHhcc
Q 021798 169 -NVV---AHGYTKGDGLGAEIIGTFVLVYTVFSATD 200 (307)
Q Consensus 169 -~~~---~~~~~~~~~~~~E~~~T~iL~~~il~~~~ 200 (307)
... .-+.+..+.|+-=++|.++..+.++....
T Consensus 138 ~~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~~~ 173 (268)
T PRK11562 138 VHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMAIR 173 (268)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000 11234567788888888888888876543
No 35
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=43.87 E-value=1.4e+02 Score=30.00 Aligned_cols=71 Identities=21% Similarity=0.100 Sum_probs=44.4
Q ss_pred ChHHHH--HHHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhcccccccccCCCcceecCCCCcCchhhHHHHHHHHHHH
Q 021798 116 NPAVTL--GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVY 193 (307)
Q Consensus 116 NPavTl--a~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~iL~~ 193 (307)
=|++.. +.+..+.---.+..++..++-+|.++|+++.+.++ .. +. ......+...|+.|.+.|+++-+
T Consensus 152 wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~-~~--~~-------~~~~~gW~~~FiI~G~i~~~~gi 221 (495)
T KOG2533|consen 152 WPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVF-KL--NG-------SGGLAGWRWLFIIEGVITLVLGI 221 (495)
T ss_pred chHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhh-hh--cC-------CCCcCCceeehhHHHHHHHHHHh
Confidence 455443 44444444566788888888899999999999876 11 00 00111233458888888888776
Q ss_pred HHH
Q 021798 194 TVF 196 (307)
Q Consensus 194 ~il 196 (307)
+++
T Consensus 222 ~~f 224 (495)
T KOG2533|consen 222 VVF 224 (495)
T ss_pred eEE
Confidence 654
No 36
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=40.33 E-value=4.2e+02 Score=27.02 Aligned_cols=54 Identities=17% Similarity=0.189 Sum_probs=35.0
Q ss_pred HHHHhcCCCCcccChH---HHHHHHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhc
Q 021798 103 LVYCTAGISGGHINPA---VTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (307)
Q Consensus 103 ~i~~~~~iSG~h~NPa---vTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~ 156 (307)
.++....-++|+.-.. |..+.+.....|......++.+.++|+.+|....+.++
T Consensus 355 l~Wi~t~W~~G~~~~~~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vl 411 (650)
T PF04632_consen 355 LFWIATGWPSGATAVMMAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVL 411 (650)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3333333344554333 33333333445788899999999999999999988887
No 37
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=39.06 E-value=11 Score=29.85 Aligned_cols=19 Identities=32% Similarity=0.506 Sum_probs=16.9
Q ss_pred CCCcccChHHHHHHHHhhc
Q 021798 110 ISGGHINPAVTLGLFLARK 128 (307)
Q Consensus 110 iSG~h~NPavTla~~~~g~ 128 (307)
-|+||+||.+.++-.+..+
T Consensus 7 Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 7 GTRGHVYPFLALARALRRR 25 (139)
T ss_dssp SSHHHHHHHHHHHHHHHHT
T ss_pred CChhHHHHHHHHHHHHhcc
Confidence 4789999999999999765
No 38
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=37.22 E-value=9.9 Score=36.11 Aligned_cols=21 Identities=33% Similarity=0.616 Sum_probs=18.1
Q ss_pred hcCCCCcccChHHHHHHHHhh
Q 021798 107 TAGISGGHINPAVTLGLFLAR 127 (307)
Q Consensus 107 ~~~iSG~h~NPavTla~~~~g 127 (307)
.++-||||+.||++++-.+..
T Consensus 7 ~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 7 TGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EcCCcHHHHHHHHHHHHHHHh
Confidence 456699999999999999875
No 39
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=35.72 E-value=3.2e+02 Score=24.40 Aligned_cols=83 Identities=19% Similarity=0.192 Sum_probs=45.9
Q ss_pred ChHHHHHHHHhhcCccchhHHHHHhhhhhHHHHhHHHHhhccc-ccc-cccCC---Cccee---cCCCCcCchhhHHHHH
Q 021798 116 NPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGA-GQY-GRLAG---GANVV---AHGYTKGDGLGAEIIG 187 (307)
Q Consensus 116 NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~-~~~-~~~~~---~~~~~---~~~~~~~~~~~~E~~~ 187 (307)
|-.......+.||.+|.+.+--|.-=.+|=++|+.++-.+... ... +..+. ..... .-+.+..+.|+.=+++
T Consensus 68 n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gilc 147 (239)
T TIGR00790 68 NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVGSLAIAEHKAHHTFVEAFFLGILC 147 (239)
T ss_pred chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 4444434466788888888777766666666666665444311 110 00000 00000 1134556777788888
Q ss_pred HHHHHHHHHHh
Q 021798 188 TFVLVYTVFSA 198 (307)
Q Consensus 188 T~iL~~~il~~ 198 (307)
.++..+.++..
T Consensus 148 n~lV~lav~~~ 158 (239)
T TIGR00790 148 NWLVCLAVWMS 158 (239)
T ss_pred HHHHHHHHHHH
Confidence 88888887653
No 40
>PRK09713 focB putative formate transporter; Provisional
Probab=30.23 E-value=4.5e+02 Score=24.33 Aligned_cols=102 Identities=11% Similarity=0.004 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhhcCccchhHHH----HHhhhhhHHHHhHHHHhhcccccccccCCC-
Q 021798 93 AWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFY----MVMQCLGAICGAGVVKGFMGAGQYGRLAGG- 167 (307)
Q Consensus 93 ~~~~g~~v~~~i~~~~~iSG~h~NPavTla~~~~g~~~~~~~~~y----i~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~- 167 (307)
++.+.+.+.+.++.-+..-=+ |=. ++.....++.+|++.+-. +++-++|+++-+.+++.. ......+..
T Consensus 71 g~~F~vGLilIv~~g~ELfTg--N~~-~~~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s---~~~~~~~~~~ 144 (282)
T PRK09713 71 GLCFTLGFILLAVCGTSLFTS--SVM-TVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFS---GLVMSENAMW 144 (282)
T ss_pred HHHHHHHHHHHHHhCccccHH--HHH-HHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---ccccccchhH
Confidence 455555555555543332112 222 222245788888777744 445555555555444321 111100000
Q ss_pred ---ccee---cCCCCcCchhhHHHHHHHHHHHHHHHhcc
Q 021798 168 ---ANVV---AHGYTKGDGLGAEIIGTFVLVYTVFSATD 200 (307)
Q Consensus 168 ---~~~~---~~~~~~~~~~~~E~~~T~iL~~~il~~~~ 200 (307)
.... .-+.+.++.|+--++|-++.++.++....
T Consensus 145 ~~~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~~~~ 183 (282)
T PRK09713 145 GVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWMSYC 183 (282)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 0001 12345678888889999999998876443
No 41
>COG0730 Predicted permeases [General function prediction only]
Probab=29.69 E-value=3.2e+02 Score=24.31 Aligned_cols=30 Identities=20% Similarity=0.211 Sum_probs=24.2
Q ss_pred hhcCccchhHHHHHhhhhhHHHHhHHHHhh
Q 021798 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGF 155 (307)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~ 155 (307)
.++.+|+....+..+=++|+++|+.+...+
T Consensus 68 ~~~v~~~~~~~l~~~~~~G~~lG~~l~~~~ 97 (258)
T COG0730 68 RGNVDWKLALILLLGALIGAFLGALLALLL 97 (258)
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 456789999999999999999997666543
No 42
>PF08370 PDR_assoc: Plant PDR ABC transporter associated; InterPro: IPR013581 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This domain is found on the C terminus of ABC-2 type transporter domains (IPR013525 from INTERPRO). It seems to be associated with the plant pleiotropic drug resistance (PDR) protein family of ABC transporters. Like in yeast, plant PDR ABC transporters may also play a role in the transport of antifungal agents [] (see also IPR010929 from INTERPRO). The PDR family is characterised by a configuration in which the ABC domain is nearer the N terminus of the protein than the transmembrane domain [].
Probab=24.97 E-value=1.3e+02 Score=21.42 Aligned_cols=42 Identities=12% Similarity=0.349 Sum_probs=24.2
Q ss_pred hhhHHHHHHcCCCCCCCcceeeec--chHHHHH--------HHHhhcCCCCCC
Q 021798 240 ARSLGAAIIYNKDRGWDDHVLDFL--GGTIRWS--------WTRSFVPPSRDQ 282 (307)
Q Consensus 240 Ar~~g~~l~~~~~~~~~~~wvy~v--gP~~Ga~--------l~~~f~~~~~~~ 282 (307)
..++|-++.... ......+.||+ |-++|-. +++.|+++.+++
T Consensus 9 ~~tlG~~vL~~r-G~~~~~~WyWIgvgaL~G~~vlFNil~~laL~yL~p~~k~ 60 (65)
T PF08370_consen 9 NSTLGVAVLKSR-GLFTESYWYWIGVGALLGFIVLFNILFTLALTYLNPLGKS 60 (65)
T ss_pred CCcHHHHHHHHc-CCCCCCcEEeehHHHHHHHHHHHHHHHHHHHHhcCCcCCC
Confidence 367888887532 23444556886 4555652 266666655443
No 43
>TIGR02762 TraL_TIGR type IV conjugative transfer system protein TraL. This protein is part of the type IV secretion system for conjugative plasmid transfer. The function of the TraL protein is unknown.
Probab=22.52 E-value=24 Score=27.05 Aligned_cols=18 Identities=6% Similarity=-0.042 Sum_probs=14.0
Q ss_pred cCCCCCCCcceeeecchH
Q 021798 249 YNKDRGWDDHVLDFLGGT 266 (307)
Q Consensus 249 ~~~~~~~~~~wvy~vgP~ 266 (307)
.|++..|-+|+.||.+|.
T Consensus 61 ~g~~~~~l~h~~YW~~p~ 78 (95)
T TIGR02762 61 GGEGENFLLHLFYWYLPG 78 (95)
T ss_pred cCCChhHHHHHHHHHccc
Confidence 456677888999998775
No 44
>COG1289 Predicted membrane protein [Function unknown]
Probab=20.85 E-value=6.8e+02 Score=25.98 Aligned_cols=27 Identities=22% Similarity=0.178 Sum_probs=21.1
Q ss_pred ccchhHHHHHhhhhhHHHHhHHHHhhc
Q 021798 130 SLTRALFYMVMQCLGAICGAGVVKGFM 156 (307)
Q Consensus 130 ~~~~~~~yi~aQ~lGa~~ga~~~~~~~ 156 (307)
+..+..-++.+=++|..+|..+.+.+.
T Consensus 399 t~~r~~~ri~GTllg~~~g~~~l~~~~ 425 (674)
T COG1289 399 TRQRARQRILGTLLGLLLGLLVLLLLL 425 (674)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 566778888888888888888877765
Done!