Your job contains 1 sequence.
>021799
METGTSSKEDAPVFLDRSSRVTRGKRMNKLLDDENEEDEAFWNQDALKEEENDDNYEEEQ
EIADEFDSDFDEDEPEPDEEVENEVDERVWTKKRLIFPGKPLTKKKKKKKILSKLDSPDK
DVKSNEQSILPENHDVPNDVEGERIIRKSTRTAVVVRQAERDAIRAALQATMKPIKRKKE
GEEKRMTQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYTGPQLRYLSKDGY
SYLEFSKGVSFQSELSTTSVPYPERAVCAVTGLPAKNTMKRTTIATEEFILLWTMTVSNL
LQIGVGE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021799
(307 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040580 - symbol:SWC2 "AT2G36740" species:3702... 680 6.5e-67 1
ZFIN|ZDB-GENE-060503-88 - symbol:vps72 "vacuolar protein ... 110 5.4e-06 3
FB|FBgn0032321 - symbol:YL-1 "YL-1" species:7227 "Drosoph... 116 1.6e-05 2
UNIPROTKB|H9KYW9 - symbol:LOC100859689 "Uncharacterized p... 108 0.00011 2
DICTYBASE|DDB_G0293512 - symbol:DDB_G0293512 "Vacuolar pr... 110 0.00013 3
ZFIN|ZDB-GENE-100922-13 - symbol:si:ch211-203d17.1 "si:ch... 96 0.00032 2
>TAIR|locus:2040580 [details] [associations]
symbol:SWC2 "AT2G36740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=RCA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0042742 "defense response to
bacterium" evidence=RCA] InterPro:IPR008895 Pfam:PF05764
GO:GO:0005634 EMBL:CP002685 GO:GO:0006355 InterPro:IPR013272
Pfam:PF08265 SMART:SM00993 KO:K11664 IPI:IPI00531367
RefSeq:NP_181212.2 UniGene:At.37514 EnsemblPlants:AT2G36740.1
GeneID:818246 KEGG:ath:AT2G36740 OMA:VPYPEKA Uniprot:F4IP06
Length = 365
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 149/275 (54%), Positives = 173/275 (62%)
Query: 8 KEDAPVFLDRSSRVTRGKRMNKLLXXXXXXXXAFWNQDALKXXXXXXXXXXXXXIAXXXX 67
+E+ VFLDR++R TRGKRM KLL FWNQ+ALK +A
Sbjct: 5 EEEPMVFLDRTTRATRGKRMTKLLDDEVEEDEQFWNQEALKEEEHDDEYEAEREVADEFD 64
Query: 68 XXXXXXXXXXXXXXXXXXXXRVWTKKRLIFPGXXXXXXXXXXXXXXXXXXXXXXVKS--- 124
R KKRLI+PG +
Sbjct: 65 SDFNDDEPEPDAVAVNEKELRDLPKKRLIYPGKTASKKKKKKTKVVSQLEYIPGDEKPGE 124
Query: 125 ---NEQSILPENHDVPNDVEGERIIRKSTRTAVVVRQAERDAIRAALQATMKPIKRKKEG 181
N++ E ++ D+EGE++IRKSTRT+VVVRQAERDA+RAA+QAT KPI+RKK G
Sbjct: 125 ELGNKEQEEKEENEAQEDMEGEKVIRKSTRTSVVVRQAERDALRAAIQATTKPIQRKKVG 184
Query: 182 EEKRMTQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYTGPQLRYLSKDGYS 241
EEKRMTQEEMLLEAAQTEIMNLRNLERVLAREEEVKK+AIVHKAVY GPQ+RY SKDG +
Sbjct: 185 EEKRMTQEEMLLEAAQTEIMNLRNLERVLAREEEVKKKAIVHKAVYKGPQIRYHSKDGCN 244
Query: 242 YLEFSKGVSFQSELSTTSVPYPERAVCAVTGLPAK 276
YLEF G SF SELST SVPYPE+AVC +TGLPAK
Sbjct: 245 YLEFCNGASFNSELSTKSVPYPEKAVCVITGLPAK 279
>ZFIN|ZDB-GENE-060503-88 [details] [associations]
symbol:vps72 "vacuolar protein sorting 72 homolog
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR008895 Pfam:PF05764
ZFIN:ZDB-GENE-060503-88 GO:GO:0005634 GO:GO:0006355 EMBL:CR548627
InterPro:IPR013272 Pfam:PF08265 SMART:SM00993 KO:K11664 CTD:6944
eggNOG:NOG253988 GeneTree:ENSGT00390000017503 HOGENOM:HOG000033695
HOVERGEN:HBG083244 OMA:DVEGLDQ OrthoDB:EOG4QFWDG IPI:IPI00632869
RefSeq:NP_001076413.1 UniGene:Dr.84090 Ensembl:ENSDART00000093383
GeneID:100001285 KEGG:dre:100001285 NextBio:20784979 Uniprot:Q1L8X4
Length = 369
Score = 110 (43.8 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 35/105 (33%), Positives = 52/105 (49%)
Query: 132 ENHDVPNDVEGERIIRKSTRTAVVVRQAERDAIRAALQATMKPIKRKKEGEEKRMTQEEM 191
E V ++++ IRKS R + + + R + P KRK E+ +TQ+E+
Sbjct: 115 ERRTVRDELQDLGDIRKSVRKSTSEHTRKTNE-RLQERQQEAPRKRKGAQSERVLTQDEL 173
Query: 192 LLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYTGPQLRYLS 236
L EA T NLR+LE R E KK+ + K + GP +RY S
Sbjct: 174 LDEAKLTAESNLRSLENY-ERLEADKKKQVHKKRRFEGPMIRYHS 217
Score = 48 (22.0 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 241 SYLEFSKGVSFQSELSTTS--VP-YPERAVCAVTGLPA 275
+Y+ FS +F S + + P +P + VC VT PA
Sbjct: 263 TYITFSDDEAFSSAFPSAARCTPTHPVQEVCPVTHKPA 300
Score = 42 (19.8 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 17 RSSRVTRGKRMNKLL 31
R R T G RM+KLL
Sbjct: 7 REQRSTAGNRMSKLL 21
>FB|FBgn0032321 [details] [associations]
symbol:YL-1 "YL-1" species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0016573
"histone acetylation" evidence=IDA] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0035267 "NuA4 histone acetyltransferase complex"
evidence=IPI] [GO:0010629 "negative regulation of gene expression"
evidence=IMP] InterPro:IPR008895 Pfam:PF05764 EMBL:AE014134
GO:GO:0006355 GO:GO:0003677 GO:GO:0016573 GO:GO:0006351
GO:GO:0035267 GO:GO:0010629 GO:GO:0043486 InterPro:IPR013272
Pfam:PF08265 SMART:SM00993 KO:K11664 eggNOG:NOG253988
GeneTree:ENSGT00390000017503 OMA:DVEGLDQ EMBL:AY122237
RefSeq:NP_609475.1 UniGene:Dm.12184 IntAct:Q9VKM6 MINT:MINT-318738
STRING:Q9VKM6 PaxDb:Q9VKM6 PRIDE:Q9VKM6 EnsemblMetazoa:FBtr0080146
GeneID:34516 KEGG:dme:Dmel_CG4621 UCSC:CG4621-RA CTD:34516
FlyBase:FBgn0032321 InParanoid:Q9VKM6 OrthoDB:EOG4T4BBF
PhylomeDB:Q9VKM6 GenomeRNAi:34516 NextBio:788874 Bgee:Q9VKM6
GermOnline:CG4621 Uniprot:Q9VKM6
Length = 351
Score = 116 (45.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 34/91 (37%), Positives = 51/91 (56%)
Query: 147 RKSTRTAVVVR-QAERDAIRAALQATMKPIKRKKEGEEKRMTQEEMLLEAAQTEIMNLRN 205
RKS RT+ ++ QA + ++ L K K+K E+ TQEE+L EA TE N ++
Sbjct: 130 RKSIRTSTAIKTQATKIRLKE-LDDARKRKKKKVRVEDYMPTQEELLEEAKITEEENTKS 188
Query: 206 LERVLAREEEVKKRAIVHKAVYTGPQLRYLS 236
LE+ E E KK++ K ++GP +RY S
Sbjct: 189 LEKFQKMELE-KKKSRPTKRTFSGPTIRYHS 218
Score = 46 (21.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 244 EFSKGVSFQSELSTTSVPYPERAVCAVTGLPAK 276
+F+ V FQS + P +C +T LPA+
Sbjct: 254 DFNDKV-FQSLFRHKAPPKASNGICPITRLPAR 285
>UNIPROTKB|H9KYW9 [details] [associations]
symbol:LOC100859689 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] InterPro:IPR008895
Pfam:PF05764 GO:GO:0005634 GO:GO:0006355 InterPro:IPR013272
Pfam:PF08265 SMART:SM00993 GeneTree:ENSGT00390000017503 OMA:DVEGLDQ
EMBL:AADN02010484 Ensembl:ENSGALT00000001151 Uniprot:H9KYW9
Length = 366
Score = 108 (43.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 41/117 (35%), Positives = 57/117 (48%)
Query: 123 KSNEQSILP-ENHDVPNDVEGERIIRKSTRTAVVVRQAERDAIRAALQATMKPIKRKKEG 181
K+ E P E D D G + +R+ST + +R +Q KRKK G
Sbjct: 110 KAREVKSAPLELQDEVADT-GRKHMRQST-----TEHTRQTFLR--IQERQVQSKRKKGG 161
Query: 182 E--EKRMTQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYTGPQLRYLS 236
++ +TQEE+L EA TE +NLR+LE R E KK+ + K GP +RY S
Sbjct: 162 PNYDRPLTQEELLEEAKITEEINLRSLENY-ERLEADKKKQVQKKRKCVGPVIRYWS 217
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 241 SYLEFSKGVSFQSELSTTSVP-YPERAVCAVTGLPA 275
+++ FS +F+ P P R +C VT PA
Sbjct: 261 TFISFSDDETFERFFPKAKAPRLPVREICPVTHKPA 296
>DICTYBASE|DDB_G0293512 [details] [associations]
symbol:DDB_G0293512 "Vacuolar protein
sorting-associated protein 72" species:44689 "Dictyostelium
discoideum" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR008895 Pfam:PF05764 dictyBase:DDB_G0293512
GO:GO:0005634 GO:GO:0006355 EMBL:AAFI02000217 InterPro:IPR013272
Pfam:PF08265 SMART:SM00993 RefSeq:XP_629104.1
EnsemblProtists:DDB0191982 GeneID:8629263 KEGG:ddi:DDB_G0293512
eggNOG:NOG304632 InParanoid:Q54BP8 OMA:KETEIYN Uniprot:Q54BP8
Length = 508
Score = 110 (43.8 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 186 MTQEEMLLEAAQTEIMNLRNLERVLAREEEVKKRAIVHKAVYTGPQLRYLSKDGYSYLEF 245
+TQEE+L E +TEI N +L +L +EE+ KK KA+ TGP++ Y S + + F
Sbjct: 268 LTQEELLEECKETEIYNTESLNHLLQQEEDKKKVFHPKKAILTGPRIIYRSTPEQTTITF 327
Query: 246 SKGV 249
+ +
Sbjct: 328 TDSI 331
Score = 45 (20.9 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 247 KGVSFQSELSTTSVPYPERAVCAVTGLPAK 276
KG + ++E S + +C +TGLPAK
Sbjct: 416 KGDTNRTENSENEIK-KNIELCVITGLPAK 444
Score = 37 (18.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 19 SRVTRGKRMNKL 30
SR TRGKR +L
Sbjct: 6 SRSTRGKRTTEL 17
>ZFIN|ZDB-GENE-100922-13 [details] [associations]
symbol:si:ch211-203d17.1 "si:ch211-203d17.1"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR008895 Pfam:PF05764
ZFIN:ZDB-GENE-100922-13 GO:GO:0005634 GO:GO:0006355
InterPro:IPR013272 Pfam:PF08265 SMART:SM00993
GeneTree:ENSGT00390000017503 EMBL:CT954330 IPI:IPI00804092
Ensembl:ENSDART00000127323 Uniprot:F1QYW2
Length = 335
Score = 96 (38.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 33/100 (33%), Positives = 49/100 (49%)
Query: 137 PNDVEGERIIRKSTRTAVVVRQAERDAIRAALQATMKPIKRKKEGEEKRMTQEEMLLEAA 196
P +++ + I RKS R + + R + + P +RK E+ +TQ E+L EA
Sbjct: 83 PPELQDD-INRKSVRQSTT--EHTRLTYLRLQERQVAPRRRKGTRHERPLTQAELLAEAK 139
Query: 197 QTEIMNLRNLERVLAREEEVKKRAIVHKAVYTGPQLRYLS 236
T +NLR+LE R E KKR + K G +RY S
Sbjct: 140 VTAEINLRSLENY-ERLEADKKRQVHMKRQCVGSVIRYHS 178
Score = 56 (24.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 236 SKDGYSYLEFSKGVSFQSELSTTSVP-YPERAVCAVTGLPA 275
+K +Y+ FS SFQ + P P + VC VT PA
Sbjct: 236 TKCSRTYITFSDDESFQRVFPQSPAPRVPVQEVCPVTHKPA 276
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.129 0.355 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 307 240 0.00093 113 3 11 23 0.45 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 592 (63 KB)
Total size of DFA: 161 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.73u 0.13s 24.86t Elapsed: 00:00:01
Total cpu time: 24.73u 0.13s 24.86t Elapsed: 00:00:01
Start: Fri May 10 13:01:32 2013 End: Fri May 10 13:01:33 2013