Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>021800
MASSSLLLLQLQPLNSLSSTSHNTLLFHQNTHYIPPLKVSAKPFLSSSKPLTVLFALTES
DSPKSLQPDSQTLLQELADSFDLPSDYLAQLPRDLRLDLNDAAFDLSNGPVVDECGQELG
ELLLNLTRAWEQADSSTSHSLVKKLPALESSLTDNAKSAFGKRLISAGRRFQAMGQYGQG
ELQKIAKAMTAAGKLLSASSISTTIDEQPKKETRLLKFGELQVEVTPEKAYIGAAIGFVF
GILSWELGQGIQSTPESSLQYANDNALLLAKSLRGALLAACYSSTLLSVCTVIGLFLYGR
QLASKEK

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021800
        (307 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2169150 - symbol:AT5G37360 "AT5G37360" species...   842  4.4e-84   1


>TAIR|locus:2169150 [details] [associations]
            symbol:AT5G37360 "AT5G37360" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid membrane"
            evidence=IDA] EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009535
            EMBL:AY058859 EMBL:AY103300 IPI:IPI00538544 RefSeq:NP_198552.1
            UniGene:At.21463 STRING:Q93Z11 PaxDb:Q93Z11 PRIDE:Q93Z11
            EnsemblPlants:AT5G37360.1 GeneID:833710 KEGG:ath:AT5G37360
            TAIR:At5g37360 eggNOG:NOG276204 HOGENOM:HOG000029611
            InParanoid:Q93Z11 OMA:QYANDNA PhylomeDB:Q93Z11
            ProtClustDB:CLSN2686903 Genevestigator:Q93Z11 Uniprot:Q93Z11
        Length = 309

 Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
 Identities = 172/279 (61%), Positives = 206/279 (73%)

Query:    32 HYIPPLKVSAKPFLSSSKPLTVLFALTESDSPKSLQ---PDSQTLLQELADSFDLPSDYL 88
             H+   LK +     + SK LT+ FALTESDS K L+   P S++LL +L+  FDLPSDY 
Sbjct:    31 HFSSSLKPNKSKRHNLSKSLTLRFALTESDSTKPLEIEEPSSKSLLLQLSKCFDLPSDYF 90

Query:    89 AQLPRDLRLDLNDAAFDLSNGPVVDECGQELGELLLNLTRAWEQADSSTSHSLVKKLPAL 148
              QLP DLRLDLNDAAFDLSNGPV+DECGQELGE LLNL+RAWEQAD+STS SLV+KLP L
Sbjct:    91 QQLPNDLRLDLNDAAFDLSNGPVIDECGQELGETLLNLSRAWEQADTSTSRSLVEKLPEL 150

Query:   149 ESSLTDNAKSAFGKRLISAGRRFQAMGQYGQGELQKIAKAMTAAGKLLSASSISTTIDEQ 208
             E  LTD A+SAFGKRLISAG+RFQ MGQY +GELQKIAKAM   G +LSA + S ++  +
Sbjct:   151 EILLTDGARSAFGKRLISAGKRFQGMGQYAKGELQKIAKAMITTGGVLSAKTSSVSVSNE 210

Query:   209 PKKETRLLKFGELQVEVTPEKAYIGAAIGFVFGILSWELGQGIQSTPESSLQYANDNXXX 268
              K  TR+ KFGELQV VTPEKAY GAAI F++GILSW++ QGIQS PE+SLQYANDN   
Sbjct:   211 SKSGTRMFKFGELQVAVTPEKAYTGAAIAFIYGILSWQISQGIQSIPENSLQYANDNALL 270

Query:   269 XXXXXXXXXXXXCYSSTLLSVCTVIGLFLYGRQLASKEK 307
                          Y+ST+LS  T  GL L  +QL+S+++
Sbjct:   271 IGKSLRGSLLALFYASTVLSGFTTAGLILLAKQLSSEKE 309


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.130   0.364    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      307       268   0.00096  114 3  11 23  0.39    34
                                                     32  0.39    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  176 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.67u 0.16s 23.83t   Elapsed:  00:00:01
  Total cpu time:  23.67u 0.16s 23.83t   Elapsed:  00:00:01
  Start:  Fri May 10 13:02:02 2013   End:  Fri May 10 13:02:03 2013

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