BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021802
(307 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55BZ4|PCY2_DICDI Ethanolamine-phosphate cytidylyltransferase OS=Dictyostelium
discoideum GN=pctA PE=1 SV=1
Length = 360
Score = 267 bits (683), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 132/245 (53%), Positives = 168/245 (68%), Gaps = 8/245 (3%)
Query: 45 TRKKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHE 104
T KKP+RVY+DGCFD+MH+GH NALRQAR LGD LVVGV +D EI NKGPPV E
Sbjct: 3 TTTNKKPIRVYVDGCFDLMHFGHANALRQARELGDILVVGVHTDEEIAKNKGPPVMNEQE 62
Query: 105 RMIMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKK 164
R V A KW DEV APY +T++++ D N D+ +HG+D V DG D YE KK
Sbjct: 63 RYKAVRACKWADEVAEGAPYTLTEEYL----DSLNCDFCVHGEDISVGADGKDVYEGIKK 118
Query: 165 AGRYKQIKRTEGVSSTDIVGRMLLCVRERSISDSHNHSSLQRQFSHGHNQKVEERGSGGT 224
+G+++ IKRTEGVS+T++VGRMLLC ++ N S Q G N V + S T
Sbjct: 119 SGKFRFIKRTEGVSTTELVGRMLLCTKDH----LQNVSGEQTSPLGGVNPNVLHKQSPYT 174
Query: 225 RVSHFLPTSRRIVQFSNGKGPGPDARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIH 284
+SHFLPT+R+IVQFS G+ P P+ +IIY+DG FDLFH GH E L+ AR LGD+L+VG+H
Sbjct: 175 SLSHFLPTTRKIVQFSEGRSPKPNDKIIYMDGGFDLFHVGHTEALKQARALGDYLIVGVH 234
Query: 285 NDQTV 289
+D+ V
Sbjct: 235 DDRVV 239
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 96/138 (69%), Gaps = 8/138 (5%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
+YMDG FD+ H GH AL+QARALGD L+VGV D + KG P+ LHER++ V +
Sbjct: 202 IYMDGGFDLFHVGHTEALKQARALGDYLIVGVHDDRVVHEQKGSNFPIMNLHERVLSVLS 261
Query: 112 VKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVL-PD-GTDAYELAKKAGRYK 169
++VDEV+ AP+++TKD + D +I+ ++HGDD VL P+ G D Y+L ++ G YK
Sbjct: 262 CRYVDEVVIGAPFSVTKD----MIDSLHINVVVHGDDQVVLGPEGGVDPYKLPRELGIYK 317
Query: 170 QIKRTEGVSSTDIVGRML 187
++K TEG+++T+IV R++
Sbjct: 318 EVKHTEGLTATEIVKRII 335
>sp|Q5EA75|PCY2_BOVIN Ethanolamine-phosphate cytidylyltransferase OS=Bos taurus GN=PCYT2
PE=2 SV=1
Length = 389
Score = 231 bits (589), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/245 (48%), Positives = 162/245 (66%), Gaps = 9/245 (3%)
Query: 47 KKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERM 106
+ ++ VRV+ DGC+DM+HYGH N LRQARA+GD L+VGV +D EI +KGPPV ER
Sbjct: 18 RARRAVRVWCDGCYDMVHYGHSNQLRQARAMGDHLIVGVHTDEEIAKHKGPPVFTQEERY 77
Query: 107 IMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAG 166
MV A+KWVDEV+ APY T + + D+YN D+ +HG+D + DG D YE K+AG
Sbjct: 78 KMVQAIKWVDEVVPAAPYVTTLETL----DKYNCDFCVHGNDITLTVDGRDTYEEVKQAG 133
Query: 167 RYKQIKRTEGVSSTDIVGRMLLCVRERSISDSHNHSSLQRQFSHGHNQKVEERGSGGTRV 226
RY++ KRT+GVS+TD+VGRMLL ++ S SS R+++ + R T V
Sbjct: 134 RYRECKRTQGVSTTDLVGRMLLVT--KAHHSSQEMSSEYREYADSFGKCPGGRNP-WTGV 190
Query: 227 SHFLPTSRRIVQFSNGKGPGPDARIIYIDGAFDLFHAGHVEILRIARGLGD--FLLVGIH 284
S FL TS++I+QF++GK P P +IY+ GAFDLFH GHV+ L GL + +++ G+H
Sbjct: 191 SQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVYGLAERPYVIAGLH 250
Query: 285 NDQTV 289
DQ V
Sbjct: 251 FDQEV 255
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 78/140 (55%), Gaps = 11/140 (7%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQ--LVVGVVSDAEIIANKGP--PVTPLHERMIMV 109
+Y+ G FD+ H GH + L + L ++ ++ G+ D E+ KG P+ LHER + V
Sbjct: 216 IYVAGAFDLFHIGHVDFLEKVYGLAERPYVIAGLHFDQEVNHYKGKNYPIMNLHERTLSV 275
Query: 110 NAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLP--DGTDAYELAKKAGR 167
A ++V EV+ APY++T + L D + +D + HG V+P DG+D YE K+ G
Sbjct: 276 LACRYVSEVVIGAPYSVTAE----LLDHFKVDLVCHGKTE-VVPDKDGSDPYEEPKRRGI 330
Query: 168 YKQIKRTEGVSSTDIVGRML 187
+ Q+ +++ IV R++
Sbjct: 331 FCQVDSGNDLTTDLIVQRII 350
>sp|Q99447|PCY2_HUMAN Ethanolamine-phosphate cytidylyltransferase OS=Homo sapiens
GN=PCYT2 PE=1 SV=1
Length = 389
Score = 228 bits (581), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 160/243 (65%), Gaps = 9/243 (3%)
Query: 49 KKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIM 108
++ VRV+ DGC+DM+HYGH N LRQARA+GD L+VGV +D EI +KGPPV ER M
Sbjct: 20 RRAVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERYKM 79
Query: 109 VNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRY 168
V A+KWVDEV+ APY T + + D+YN D+ +HG+D + DG D YE K+AGRY
Sbjct: 80 VQAIKWVDEVVPAAPYVTTLETL----DKYNCDFCVHGNDITLTVDGRDTYEEVKQAGRY 135
Query: 169 KQIKRTEGVSSTDIVGRMLLCVRERSISDSHNHSSLQRQFSHGHNQKVEERGSGGTRVSH 228
++ KRT+GVS+TD+VGRMLL ++ S SS R+++ + R T VS
Sbjct: 136 RECKRTQGVSTTDLVGRMLLVT--KAHHSSQEMSSEYREYADSFGKCPGGRNP-WTGVSQ 192
Query: 229 FLPTSRRIVQFSNGKGPGPDARIIYIDGAFDLFHAGHVEILRIARGLGD--FLLVGIHND 286
FL TS++I+QF++GK P P +IY+ GAFDLFH GHV+ L L + +++ G+H D
Sbjct: 193 FLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFD 252
Query: 287 QTV 289
Q V
Sbjct: 253 QEV 255
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 78/140 (55%), Gaps = 11/140 (7%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQ--LVVGVVSDAEIIANKGP--PVTPLHERMIMV 109
+Y+ G FD+ H GH + L + L ++ ++ G+ D E+ KG P+ LHER + V
Sbjct: 216 IYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSV 275
Query: 110 NAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLP--DGTDAYELAKKAGR 167
A ++V EV+ APYA+T + L + +D + HG ++P DG+D Y+ K+ G
Sbjct: 276 LACRYVSEVVIGAPYAVTAE----LLSHFKVDLVCHGKTE-IIPDRDGSDPYQEPKRRGI 330
Query: 168 YKQIKRTEGVSSTDIVGRML 187
++QI +++ IV R++
Sbjct: 331 FRQIDSGSNLTTDLIVQRII 350
>sp|O88637|PCY2_RAT Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 224 bits (570), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 118/260 (45%), Positives = 164/260 (63%), Gaps = 25/260 (9%)
Query: 49 KKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIM 108
++ VRV+ DGC+DM+HYGH N LRQARA+GD L+VGV +D EI +KGPPV ER M
Sbjct: 20 QRTVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERYKM 79
Query: 109 VNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRY 168
V A+KWVDEV+ APY T + + D++N D+ +HG+D + DG D YE K+AGRY
Sbjct: 80 VQAIKWVDEVVPAAPYVTTLETL----DKHNCDFCVHGNDITLTVDGRDTYEEVKQAGRY 135
Query: 169 KQIKRTEGVSSTDIVGRMLLCVRERSISDSHNHSSLQRQFSHGHNQ-------------K 215
++ KRT+GVS+TD+VGRMLL ++ S SS R+++ + +
Sbjct: 136 RECKRTQGVSTTDLVGRMLLVT--KAHHSSQEMSSEYREYADSFGKPPHPTPAGDTLSSE 193
Query: 216 VEERGSGG----TRVSHFLPTSRRIVQFSNGKGPGPDARIIYIDGAFDLFHAGHVEILRI 271
V + GG T VS FL TS++I+QF++GK P P +IY+ GAFDLFH GHV+ L+
Sbjct: 194 VSSQCPGGQSPWTGVSQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLQE 253
Query: 272 ARGLGD--FLLVGIHNDQTV 289
L +++ G+H DQ V
Sbjct: 254 VHKLAKRPYVIAGLHFDQEV 273
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 78/140 (55%), Gaps = 11/140 (7%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQ--LVVGVVSDAEIIANKGP--PVTPLHERMIMV 109
+Y+ G FD+ H GH + L++ L + ++ G+ D E+ KG P+ LHER + V
Sbjct: 234 IYVAGAFDLFHIGHVDFLQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSV 293
Query: 110 NAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLP--DGTDAYELAKKAGR 167
A ++V EV+ APY++T + L + + +D + HG ++P DG+D YE K+ G
Sbjct: 294 LACRYVSEVVIGAPYSVTAE----LLNHFKVDLVCHGKTE-IVPDRDGSDPYEEPKRRGI 348
Query: 168 YKQIKRTEGVSSTDIVGRML 187
+ QI +++ IV R++
Sbjct: 349 FCQIDSGSDLTTDLIVQRII 368
>sp|Q922E4|PCY2_MOUSE Ethanolamine-phosphate cytidylyltransferase OS=Mus musculus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 222 bits (566), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/257 (45%), Positives = 161/257 (62%), Gaps = 25/257 (9%)
Query: 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA 111
VRV+ DGC+DM+HYGH N LRQARA+GD L+VGV +D EI +KGPPV ER MV A
Sbjct: 23 VRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQA 82
Query: 112 VKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYKQI 171
+KWVDEV+ APY T + + D++N D+ +HG+D + DG D YE K+AGRY++
Sbjct: 83 IKWVDEVVPAAPYVTTLETL----DKHNCDFCVHGNDITLTVDGRDTYEEVKQAGRYREC 138
Query: 172 KRTEGVSSTDIVGRMLLCVRERSISDSHNHSSLQRQFSHGHNQ-------------KVEE 218
KRT+GVS+TD+VGRMLL + S SS R+++ + +V
Sbjct: 139 KRTQGVSTTDLVGRMLLVTKAH--HSSQEMSSEYREYADSFGKPPHPTPAGDTLSSEVSS 196
Query: 219 RGSGG----TRVSHFLPTSRRIVQFSNGKGPGPDARIIYIDGAFDLFHAGHVEILRIARG 274
+ GG T VS FL TS++I+QF++GK P P +IY+ GAFDLFH GHV+ L+
Sbjct: 197 QCPGGQSPWTGVSQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLQEVHK 256
Query: 275 LGD--FLLVGIHNDQTV 289
L +++ G+H DQ V
Sbjct: 257 LAKRPYVIAGLHFDQEV 273
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 91/176 (51%), Gaps = 14/176 (7%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQ--LVVGVVSDAEIIANKGP--PVTPLHERMIMV 109
+Y+ G FD+ H GH + L++ L + ++ G+ D E+ KG P+ LHER + V
Sbjct: 234 IYVAGAFDLFHIGHVDFLQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSV 293
Query: 110 NAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLP--DGTDAYELAKKAGR 167
A ++V EV+ APY++T + L + + +D + HG ++P DG+D Y+ K+ G
Sbjct: 294 LACRYVSEVVIGAPYSVTAE----LLNHFKVDLVCHGKTE-IVPDRDGSDPYQEPKRRGI 348
Query: 168 YKQIKRTEGVSSTDIVGRMLLCVRERSISDSHNHSSLQRQFSHGHNQKVEERGSGG 223
+ QI +++ IV R+ ++ R ++ N ++ + K +E GG
Sbjct: 349 FYQIDSGSDLTTDLIVQRI---IKNRLEYEARNQKKEAKELAFLEATKQQEAPPGG 401
>sp|Q8SQW6|ECT1_ENCCU Probable ethanolamine-phosphate cytidylyltransferase
OS=Encephalitozoon cuniculi (strain GB-M1) GN=MUQ1 PE=1
SV=1
Length = 322
Score = 176 bits (447), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 136/238 (57%), Gaps = 27/238 (11%)
Query: 53 RVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAV 112
+V+ DGCFDM HYGH NALRQ++ALGD L+ GV S I KG PV ER +V
Sbjct: 8 KVWADGCFDMFHYGHANALRQSKALGDYLIAGVHSSLSINQEKGLPVMEDEERYEVVEGC 67
Query: 113 KWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYKQIK 172
++VDEV+ DAP+ +K EY + + HG+D + G D+Y ++ G +++++
Sbjct: 68 RYVDEVVRDAPFVTQTSMIK----EYGVSIVAHGNDIVLDSSGQDSYCQVRRMGIFREVE 123
Query: 173 RTEGVSSTDIVGRMLLCVRERSISDSHNHSSLQRQFSHGHNQKVEERGSGGTRVSHFLPT 232
RT G+S+T+IVGRM+L R S D N S + H
Sbjct: 124 RTFGISTTEIVGRMMLKNRG-SWLDGENGESSKDSGYH---------------------- 160
Query: 233 SRRIVQFSNGKGPGPDARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTVR 290
R + F + G +++++DG FDLFHAGHV LRIARG+GD+L+VGIH+D+T +
Sbjct: 161 DRLLSLFMSSMGREKRGKVVFMDGNFDLFHAGHVASLRIARGMGDYLIVGIHDDETTK 218
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 63/106 (59%), Gaps = 10/106 (9%)
Query: 29 LLTLYLAAPNDRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSD 88
LL+L++++ R+K+ V V+MDG FD+ H GH +LR AR +GD L+VG+ D
Sbjct: 163 LLSLFMSSMG-------REKRGKV-VFMDGNFDLFHAGHVASLRIARGMGDYLIVGIHDD 214
Query: 89 AEIIA-NKGPPVTPLHERMIMVNAVKWVDEVISDAPYAITKDFMKK 133
+ PV ERM+ + A ++VDE++ +PY + +F+K+
Sbjct: 215 ETTKEYTRSYPVLSTKERMLTLMACRYVDEIVV-SPYLVGSEFIKR 259
>sp|Q9UTI6|ECT1_SCHPO Probable ethanolamine-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC15E1.05c PE=2 SV=1
Length = 365
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 134/245 (54%), Gaps = 22/245 (8%)
Query: 53 RVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAV 112
R+++DGC D HYGH NA+ QA+ LG+ LV+G+ SD EI NKGPPV L ER + N
Sbjct: 10 RLWLDGCMDFFHYGHSNAILQAKQLGETLVIGIHSDEEITLNKGPPVMTLEERCLSANTC 69
Query: 113 KWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYKQIK 172
KWVDEV+ APY ++M++ Y Y++HGDD +G D Y AK A +Y ++K
Sbjct: 70 KWVDEVVPSAPYVFDLEWMRR----YGCQYVVHGDDISTDANGDDCYRFAKAADQYLEVK 125
Query: 173 RTEGVSSTDIVGRML----LCVRERSISDSHNHSSLQRQFSHGHNQKVEERGSGGTRVSH 228
RTEGVS+T+++ R+L L + +S + L R+F+ + G T +
Sbjct: 126 RTEGVSTTELLDRLLSSVPLEIYSTPVSVLSSQIDLLRRFATDSD--------GLTPFTD 177
Query: 229 -FLPTSRRIVQFSNGKG---PGPDARIIYIDGAFDLFHAGHVEILRIARGL--GDFLLVG 282
F+ + + +G P+ IIYIDG +DLF H+ L + + G ++ G
Sbjct: 178 VFIYNTEKPETLISGTTLLRLNPEKNIIYIDGDWDLFTEKHISALELCTRMFPGIPIMAG 237
Query: 283 IHNDQ 287
I D+
Sbjct: 238 IFADE 242
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 252 IYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTVRL-KNPSV 296
+++DG D FH GH + A+ LG+ L++GIH+D+ + L K P V
Sbjct: 11 LWLDGCMDFFHYGHSNAILQAKQLGETLVIGIHSDEEITLNKGPPV 56
>sp|P33412|ECT1_YEAST Ethanolamine-phosphate cytidylyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ECT1 PE=1
SV=1
Length = 323
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 116/226 (51%), Gaps = 20/226 (8%)
Query: 51 PVRVYMDGCFDMMHYGHCNALRQARAL----GDQLVVGVVSDAEIIANKGPPVTPLHERM 106
P +V++DGCFD H+GH A+ QAR +L GV +D +I NKG PV ER
Sbjct: 7 PDKVWIDGCFDFTHHGHAGAILQARRTVSKENGKLFCGVHTDEDIQHNKGTPVMNSSERY 66
Query: 107 IMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAG 166
+ +W EV+ APY ++M D+Y Y++HGDD + +G D Y+L K+ G
Sbjct: 67 EHTRSNRWCSEVVEAAPYVTDPNWM----DKYQCQYVVHGDDITIDANGEDCYKLVKEMG 122
Query: 167 RYKQIKRTEGVSSTDIVGRMLLCVRERSISDSHNHSSLQRQFSHGHNQKVEERGSGGTRV 226
R+K +KRT GVS+T+I+ R+L ++S+ +H + Q++ V
Sbjct: 123 RFKVVKRTYGVSTTEIIHRILT---KKSLPPTHPD-------YYPTTQELSFYSVAQDAV 172
Query: 227 SHFLPTSRRIVQ--FSNGKGPGPDARIIYIDGAFDLFHAGHVEILR 270
S +R + NG +Y+DG FDLFH G ++ LR
Sbjct: 173 SKHCYVFQRDLDNVLVNGGYKFDAEDCVYVDGDFDLFHMGDIDQLR 218
Score = 38.9 bits (89), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 54 VYMDGCFDMMHYGHCNALRQARA---LGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVN 110
VY+DG FD+ H G + LR+ + +L+VG+ + ++ + + ER++ V
Sbjct: 200 VYVDGDFDLFHMGDIDQLRKLKMDLHPDKKLIVGITT-----SDYSSTIMTMKERVLSVL 254
Query: 111 AVKWVDEVISDA 122
+ K+VD VI DA
Sbjct: 255 SCKYVDAVIIDA 266
>sp|P49587|PCY1_PLAFK Choline-phosphate cytidylyltransferase OS=Plasmodium falciparum
(isolate K1 / Thailand) GN=CTP PE=2 SV=1
Length = 370
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 24/161 (14%)
Query: 47 KKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQ--LVVGVVSDAEIIANKGPPVTPLHE 104
K K V +Y DG +DM+H GH L QA+ L + L+VGV SD E KG V L E
Sbjct: 87 KNSKNVVIYADGVYDMLHLGHMKQLEQAKKLFENTTLIVGVTSDNETKLFKGQVVQTLEE 146
Query: 105 RMIMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVL------------ 152
R + ++WVDE+IS P+ +T +F++K Y IDY+ H D P
Sbjct: 147 RTETLKHIRWVDEIISPCPWVVTPEFLEK----YKIDYVAHDDIPYANNQKKKKKKKSKG 202
Query: 153 ------PDGTDAYELAKKAGRYKQIKRTEGVSSTDIVGRML 187
+ D Y K+AG++K +RTEGVS+TD++ R+L
Sbjct: 203 KSFSFDEENEDIYAWLKRAGKFKATQRTEGVSTTDLIVRIL 243
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 251 IIYIDGAFDLFHAGHVEILRIARGL--GDFLLVGIHNDQTVRL 291
+IY DG +D+ H GH++ L A+ L L+VG+ +D +L
Sbjct: 93 VIYADGVYDMLHLGHMKQLEQAKKLFENTTLIVGVTSDNETKL 135
>sp|P49583|PCY1_CAEEL Putative choline-phosphate cytidylyltransferase OS=Caenorhabditis
elegans GN=F08C6.2 PE=2 SV=2
Length = 362
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 90/162 (55%), Gaps = 12/162 (7%)
Query: 50 KPVRVYMDGCFDMMHYGHCNALRQARALGDQ--LVVGVVSDAEIIANKGPPVTPLHERMI 107
+PVR+Y DG +D+ H+GH N LRQ + + L+VGV D + KG VT ER
Sbjct: 79 RPVRIYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKGRTVTSEEERYD 138
Query: 108 MVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGR 167
V ++VDEV +AP+ T +F+K L +D+I H P V P D YE ++ G
Sbjct: 139 GVRHCRYVDEVYREAPWFCTVEFLKNL----KVDFIAHDAIPYVAPGEEDLYEKFRREGM 194
Query: 168 YKQIKRTEGVSSTDIVGRMLLCVRERSISDSHNHSSLQRQFS 209
+ + +RTEGVS++D+V R++ D + +LQR +S
Sbjct: 195 FLETERTEGVSTSDVVCRIIRDY------DKYVRRNLQRGYS 230
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 252 IYIDGAFDLFHAGHVEILRIARGL--GDFLLVGIHNDQ 287
IY DG +DLFH GH LR + + +L+VG+ D+
Sbjct: 83 IYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDR 120
>sp|O74975|PCY1_SCHPO Probable choline-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC1827.02c PE=1 SV=3
Length = 362
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 6/140 (4%)
Query: 50 KPVRVYMDGCFDMMHYGHCNALRQARAL--GDQLVVGVVSDAEIIANKGPPVTPLHERMI 107
+PVRVY DG FD+ H GH L QA+ + L+VG+ +D KG V ER
Sbjct: 100 RPVRVYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLTHRLKGLTVMNDKERAE 159
Query: 108 MVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGR 167
+ KWVDEV+ +AP+ IT +F+ +E+ ID++ H D P D D Y KK G+
Sbjct: 160 ALRHCKWVDEVLENAPWVITPEFL----EEHKIDFVAHDDIPYASDDSGDIYLPVKKVGK 215
Query: 168 YKQIKRTEGVSSTDIVGRML 187
+ KRTEGVS++D++ R++
Sbjct: 216 FIPTKRTEGVSTSDLITRII 235
Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 252 IYIDGAFDLFHAGHVEILRIARGL--GDFLLVGIHNDQ-TVRLK 292
+Y DG FDLFH GH+ L A+ + L+VG+ NDQ T RLK
Sbjct: 104 VYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLTHRLK 147
>sp|Q9Y5K3|PCY1B_HUMAN Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B
PE=1 SV=1
Length = 369
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 50 KPVRVYMDGCFDMMHYGHCNALRQARAL--GDQLVVGVVSDAEIIANKGPPVTPLHERMI 107
+PVRVY DG FD+ H GH AL QA+ L L+VGV SD KG V ER
Sbjct: 75 RPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYE 134
Query: 108 MVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGR 167
+ ++VDEVI DAP+ +T +F++K + ID++ H D P D Y+ K+AG
Sbjct: 135 ALRHCRYVDEVIRDAPWTLTPEFLEK----HKIDFVAHDDIPYSSAGSDDVYKHIKEAGM 190
Query: 168 YKQIKRTEGVSSTDIVGRML 187
+ +RTEG+S++DI+ R++
Sbjct: 191 FVPTQRTEGISTSDIITRIV 210
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 252 IYIDGAFDLFHAGHVEILRIARGL--GDFLLVGIHND 286
+Y DG FDLFH+GH L A+ L +LLVG+ +D
Sbjct: 79 VYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSD 115
>sp|Q9QZC4|PCY1B_RAT Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus
GN=Pcyt1b PE=2 SV=1
Length = 369
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 50 KPVRVYMDGCFDMMHYGHCNALRQARAL--GDQLVVGVVSDAEIIANKGPPVTPLHERMI 107
+PVRVY DG FD+ H GH AL QA+ L L+VGV SD KG V ER
Sbjct: 75 RPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYE 134
Query: 108 MVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGR 167
+ ++VDEVI DAP+ +T +F++K + ID++ H D P D Y+ K+AG
Sbjct: 135 ALRHCRYVDEVIRDAPWTLTPEFLEK----HKIDFVAHDDIPYSSAGSDDVYKHIKEAGM 190
Query: 168 YKQIKRTEGVSSTDIVGRML 187
+ +RTEG+S++DI+ R++
Sbjct: 191 FVPTQRTEGISTSDIITRIV 210
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 252 IYIDGAFDLFHAGHVEILRIARGL--GDFLLVGIHND 286
+Y DG FDLFH+GH L A+ L +LLVG+ +D
Sbjct: 79 VYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSD 115
>sp|Q811Q9|PCY1B_MOUSE Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b
PE=1 SV=2
Length = 369
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 50 KPVRVYMDGCFDMMHYGHCNALRQARAL--GDQLVVGVVSDAEIIANKGPPVTPLHERMI 107
+PVRVY DG FD+ H GH AL QA+ L L+VGV SD KG V ER
Sbjct: 75 RPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYE 134
Query: 108 MVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGR 167
+ ++VDEVI DAP+ +T +F++K + ID++ H D P D Y+ K+AG
Sbjct: 135 ALRHCRYVDEVIRDAPWTLTPEFLEK----HKIDFVAHDDIPYSSAGSDDVYKHIKEAGM 190
Query: 168 YKQIKRTEGVSSTDIVGRML 187
+ +RTEG+S++DI+ R++
Sbjct: 191 FVPTQRTEGISTSDIITRIV 210
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 252 IYIDGAFDLFHAGHVEILRIARGL--GDFLLVGIHND 286
+Y DG FDLFH+GH L A+ L +LLVG+ +D
Sbjct: 79 VYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSD 115
>sp|P19836|PCY1A_RAT Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus
GN=Pcyt1a PE=1 SV=2
Length = 367
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 83/141 (58%), Gaps = 6/141 (4%)
Query: 49 KKPVRVYMDGCFDMMHYGHCNALRQARAL--GDQLVVGVVSDAEIIANKGPPVTPLHERM 106
++PVRVY DG FD+ H GH AL QA+ L L+VGV SD KG V +ER
Sbjct: 74 ERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERY 133
Query: 107 IMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAG 166
V ++VDEV+ +AP+ +T +F+ E+ ID++ H D P D Y+ K+AG
Sbjct: 134 DAVQHCRYVDEVVRNAPWTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAG 189
Query: 167 RYKQIKRTEGVSSTDIVGRML 187
+ +RTEG+S++DI+ R++
Sbjct: 190 MFAPTQRTEGISTSDIITRIV 210
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 252 IYIDGAFDLFHAGHVEILRIARGL--GDFLLVGIHNDQ 287
+Y DG FDLFH+GH L A+ L +L+VG+ +D+
Sbjct: 79 VYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDE 116
>sp|P49585|PCY1A_HUMAN Choline-phosphate cytidylyltransferase A OS=Homo sapiens GN=PCYT1A
PE=1 SV=2
Length = 367
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 83/141 (58%), Gaps = 6/141 (4%)
Query: 49 KKPVRVYMDGCFDMMHYGHCNALRQARAL--GDQLVVGVVSDAEIIANKGPPVTPLHERM 106
++PVRVY DG FD+ H GH AL QA+ L L+VGV SD KG V +ER
Sbjct: 74 ERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERY 133
Query: 107 IMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAG 166
V ++VDEV+ +AP+ +T +F+ E+ ID++ H D P D Y+ K+AG
Sbjct: 134 DAVQHCRYVDEVVRNAPWTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAG 189
Query: 167 RYKQIKRTEGVSSTDIVGRML 187
+ +RTEG+S++DI+ R++
Sbjct: 190 MFAPTQRTEGISTSDIITRIV 210
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 252 IYIDGAFDLFHAGHVEILRIARGL--GDFLLVGIHNDQ 287
+Y DG FDLFH+GH L A+ L +L+VG+ +D+
Sbjct: 79 VYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDE 116
>sp|P49586|PCY1A_MOUSE Choline-phosphate cytidylyltransferase A OS=Mus musculus GN=Pcyt1a
PE=1 SV=1
Length = 367
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 82/141 (58%), Gaps = 6/141 (4%)
Query: 49 KKPVRVYMDGCFDMMHYGHCNALRQARAL--GDQLVVGVVSDAEIIANKGPPVTPLHERM 106
++PVRVY DG FD+ H GH AL QA+ L L+VGV SD KG V +ER
Sbjct: 74 ERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERY 133
Query: 107 IMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAG 166
V ++VDEV+ +AP+ +T +F+ E+ ID++ H D P D Y+ K AG
Sbjct: 134 DAVQHCRYVDEVVRNAPWTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKDAG 189
Query: 167 RYKQIKRTEGVSSTDIVGRML 187
+ +RTEG+S++DI+ R++
Sbjct: 190 MFAPTQRTEGISTSDIITRIV 210
Score = 38.9 bits (89), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 252 IYIDGAFDLFHAGHVEILRIARGL--GDFLLVGIHNDQ 287
+Y DG FDLFH+GH L A+ L +L+VG+ +D+
Sbjct: 79 VYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDE 116
>sp|P49584|PCY1A_CRIGR Choline-phosphate cytidylyltransferase A OS=Cricetulus griseus
GN=PCYT1A PE=2 SV=1
Length = 367
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 82/141 (58%), Gaps = 6/141 (4%)
Query: 49 KKPVRVYMDGCFDMMHYGHCNALRQARAL--GDQLVVGVVSDAEIIANKGPPVTPLHERM 106
++PVRVY DG FD+ H GH AL QA+ L +VGV SD KG V +ER
Sbjct: 74 ERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYPIVGVCSDELTHNFKGFTVMNENERY 133
Query: 107 IMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAG 166
V ++VDEV+ +AP+ +T +F+ E+ ID++ H D P D Y+ K+AG
Sbjct: 134 DAVQHCRYVDEVVRNAPWTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAG 189
Query: 167 RYKQIKRTEGVSSTDIVGRML 187
+ +RTEG+S++DI+ R++
Sbjct: 190 MFAPTQRTEGISTSDIITRIV 210
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 252 IYIDGAFDLFHAGHVEILRIARGL--GDFLLVGIHNDQ 287
+Y DG FDLFH+GH L A+ L + +VG+ +D+
Sbjct: 79 VYADGIFDLFHSGHARALMQAKNLFPNTYPIVGVCSDE 116
>sp|P13259|PCY1_YEAST Choline-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCT1 PE=1 SV=2
Length = 424
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 79/140 (56%), Gaps = 6/140 (4%)
Query: 50 KPVRVYMDGCFDMMHYGHCNALRQARALGDQ--LVVGVVSDAEIIANKGPPVTPLHERMI 107
+P+R+Y DG FD+ H GH L Q + L+VGV SD KG V +R
Sbjct: 102 RPIRIYADGVFDLFHLGHMKQLEQCKKAFPNVTLIVGVPSDKITHKLKGLTVLTDKQRCE 161
Query: 108 MVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGR 167
+ +WVDEV+ +AP+ +T +F+ E+ IDY+ H D P V D D Y+ K+ G+
Sbjct: 162 TLTHCRWVDEVVPNAPWCVTPEFLL----EHKIDYVAHDDIPYVSADSDDIYKPIKEMGK 217
Query: 168 YKQIKRTEGVSSTDIVGRML 187
+ +RT GVS++DI+ +++
Sbjct: 218 FLTTQRTNGVSTSDIITKII 237
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 252 IYIDGAFDLFHAGHVEILRIARGL--GDFLLVGIHNDQ-TVRLK 292
IY DG FDLFH GH++ L + L+VG+ +D+ T +LK
Sbjct: 106 IYADGVFDLFHLGHMKQLEQCKKAFPNVTLIVGVPSDKITHKLK 149
>sp|Q3A526|HLDE_PELCD Bifunctional protein HldE OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=hldE PE=3 SV=1
Length = 490
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 42 LQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PV 99
L+ R++ K V V+ +GCFD++H GH L++AR LGD LV+G+ SDA I KGP P+
Sbjct: 344 LEVERRRGKTV-VFTNGCFDLLHVGHVKYLQKARRLGDLLVLGLNSDASIRRLKGPSRPL 402
Query: 100 TPLHERMIMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAY 159
ER ++ A+ +D V+ +D +L D D ++ G D P+
Sbjct: 403 ISEQERAHILAALSCIDYVV-----VFDEDTPLELIDTLRPDILVKGGDYT--PETVVGK 455
Query: 160 ELAKK-AGRYKQIKRTEGVSSTDIVGRML 187
+L + GR + I +G S+T+I+ R+L
Sbjct: 456 DLVESYGGRVELIDLVDGRSTTNIIERIL 484
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 251 IIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTV-RLKNPSVSFI 299
+++ +G FDL H GHV+ L+ AR LGD L++G+++D ++ RLK PS I
Sbjct: 354 VVFTNGCFDLLHVGHVKYLQKARRLGDLLVLGLNSDASIRRLKGPSRPLI 403
>sp|Q3IHX7|HLDE_PSEHT Bifunctional protein HldE OS=Pseudoalteromonas haloplanktis (strain
TAC 125) GN=hldE PE=3 SV=1
Length = 479
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 37 PNDRWLQWTR--KKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIAN 94
P D LQ K+ V+ +GCFD++H GH L QA+A GD+LVVG+ +DA I
Sbjct: 326 PFDDVLQHIEFAKQNGETIVFTNGCFDILHAGHVRYLAQAKARGDRLVVGLNNDASISRL 385
Query: 95 KGP--PVTPLHERMIMVNAVKWVDEVISDAPY--AITKDFMKKLFDEYNIDYIIHGDDPC 150
KG P+ PL ER ++++A+ VD VI P+ A D KL ++ + D ++ G D
Sbjct: 386 KGADRPINPLDERAMVLSALSSVDWVI---PFGSADENDTPAKLIEQISPDILVKGGDYT 442
Query: 151 VLPDGTDAYELAKKAGRYKQIKRTEGVSSTDIVGRM 186
V A + G+ + ++ +G S++ ++ ++
Sbjct: 443 V-EQIAGAEHVLLHGGKVEVLEFLDGCSTSKVISKI 477
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 251 IIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTV-RLK 292
I++ +G FD+ HAGHV L A+ GD L+VG++ND ++ RLK
Sbjct: 344 IVFTNGCFDILHAGHVRYLAQAKARGDRLVVGLNNDASISRLK 386
>sp|Q07Y78|HLDE_SHEFN Bifunctional protein HldE OS=Shewanella frigidimarina (strain NCIMB
400) GN=hldE PE=3 SV=1
Length = 476
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 76/136 (55%), Gaps = 8/136 (5%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V +GCFD++H GH + L+QA+ALGD+L+V V D+ + KGP PV P+ RM ++
Sbjct: 344 VMTNGCFDILHAGHVSYLQQAKALGDRLIVAVNDDSSVTRLKGPGRPVNPVDRRMAVLAG 403
Query: 112 VKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYKQI 171
+ VD V+ P+ T+D +++ D ++ G D V D E+ G+ + +
Sbjct: 404 LASVDWVV---PF--TEDTPQRIITRLLPDSLVKGGDYKV-EDIAGGAEVIAAGGKVEVL 457
Query: 172 KRTEGVSSTDIVGRML 187
+GVS+T I+ ++
Sbjct: 458 GFEDGVSTTAIIQNIM 473
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTV-RLKNP 294
RI+ +G FD+ HAGHV L+ A+ LGD L+V +++D +V RLK P
Sbjct: 342 RIVMTNGCFDILHAGHVSYLQQAKALGDRLIVAVNDDSSVTRLKGP 387
>sp|C6DDL3|HLDE_PECCP Bifunctional protein HldE OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=hldE PE=3 SV=1
Length = 478
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 13/148 (8%)
Query: 40 RWLQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP-- 97
+ ++ R++ + + V +GCFD++H GH + L AR LGD+L+V V SDA KGP
Sbjct: 330 KAVELARQRGEKI-VMTNGCFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGPTR 388
Query: 98 PVTPLHERMIMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDD--PCVLPDG 155
PV PL +RMI++ A++ VD V+ P+ +D ++L D ++ G D P +
Sbjct: 389 PVNPLPQRMIVLGALEAVDWVV---PF--EEDTPQRLIASILPDILVKGGDYQPHEI--- 440
Query: 156 TDAYELAKKAGRYKQIKRTEGVSSTDIV 183
+ E+ G K + +G S+T+I+
Sbjct: 441 AGSEEVWANGGEVKVLNFEDGCSTTNII 468
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 234 RRIVQFSNGKGPGPDARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND-QTVRLK 292
++ V+ + +G +I+ +G FD+ HAGHV L AR LGD L+V +++D T RLK
Sbjct: 329 KKAVELARQRG----EKIVMTNGCFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLK 384
Query: 293 NPS 295
P+
Sbjct: 385 GPT 387
>sp|Q6D164|HLDE_ERWCT Bifunctional protein HldE OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=hldE PE=3 SV=2
Length = 478
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 12/134 (8%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V +GCFD++H GH + L AR LGD+L+V V SDA KGP PV PL +RMI++ A
Sbjct: 343 VMTNGCFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGPTRPVNPLPQRMIVLGA 402
Query: 112 VKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDD--PCVLPDGTDAYELAKKAGRYK 169
++ VD V+ P+ +D ++L D ++ G D P + + E+ G K
Sbjct: 403 LEAVDWVV---PF--EEDTPQRLIASILPDILVKGGDYQPHEI---AGSEEVWANGGEVK 454
Query: 170 QIKRTEGVSSTDIV 183
+ +G S+T+I+
Sbjct: 455 VLNFEDGCSTTNII 468
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND-QTVRLKNPS 295
+I+ +G FD+ HAGHV L AR LGD L+V +++D T RLK P+
Sbjct: 341 KIVMTNGCFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGPT 387
>sp|C6A439|RIBL_THESM FAD synthase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597)
GN=ribL PE=3 SV=1
Length = 148
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 48 KKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKG-PPVTPLHERM 106
KKK +RV G FD++H GH + L+QA+ LGD+LVV V D + KG P+ ++ER
Sbjct: 3 KKKKIRVVTGGVFDILHVGHIHFLKQAKELGDELVVIVAHDKTVEERKGRRPINSMYERA 62
Query: 107 IMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDD 148
++ A+K VDEV+ P I+ + +K+L N D I G D
Sbjct: 63 EVLKALKMVDEVVIGEPNCISFEIVKQL----NPDIIALGPD 100
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 256 GAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTVR 290
G FD+ H GH+ L+ A+ LGD L+V + +D+TV
Sbjct: 13 GVFDILHVGHIHFLKQAKELGDELVVIVAHDKTVE 47
>sp|B0TTF2|HLDE_SHEHH Bifunctional protein HldE OS=Shewanella halifaxensis (strain
HAW-EB4) GN=hldE PE=3 SV=1
Length = 476
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 53 RVYM-DGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEI--IANKGPPVTPLHERMIMV 109
RV M +GCFD++H GH + L+QARALGD+L+V V +DA + + +G PV RM ++
Sbjct: 342 RVVMTNGCFDILHAGHVSYLQQARALGDRLIVAVNTDASVKRLKGEGRPVNTEDRRMTVL 401
Query: 110 NAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYK 169
A+ VD V+ P+ T+D +++ D ++ G D V D E+ G+ K
Sbjct: 402 AALASVDWVV---PF--TEDTPQRIISRLLPDLLVKGGDYKV-EDIAGGAEVMAAGGQVK 455
Query: 170 QIKRTEGVSSTDIVGRML 187
+ +G+S+T I+ ++
Sbjct: 456 VLGFEDGISTTAIIQNIM 473
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTV-RLK 292
R++ +G FD+ HAGHV L+ AR LGD L+V ++ D +V RLK
Sbjct: 342 RVVMTNGCFDILHAGHVSYLQQARALGDRLIVAVNTDASVKRLK 385
>sp|A1TYR4|HLDE_MARAV Bifunctional protein HldE OS=Marinobacter aquaeolei (strain ATCC
700491 / DSM 11845 / VT8) GN=hldE PE=3 SV=1
Length = 481
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 42 LQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PV 99
+ + R++ + + V+ +GCFD++H GH L QARALGD+LVVG+ SDA + KG PV
Sbjct: 335 IDYARQQGERI-VFTNGCFDILHAGHVRYLAQARALGDRLVVGLNSDASVRRLKGEERPV 393
Query: 100 TPLHERMIMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCV-LPDGTDA 158
L +RM +++A+ VD VI + D ++L N + G D + G D
Sbjct: 394 NSLEDRMEVLSALACVDWVIPFGDNTVENDTPEQLIKRVNPQVLAKGGDYSIDTIVGADF 453
Query: 159 YELAKKAGRYKQIKRTEGVSSTDIVGRM 186
+ + G + EG S+T ++ ++
Sbjct: 454 VQ--ENGGEVAILPTVEGRSTTGLIKKV 479
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTVR 290
RI++ +G FD+ HAGHV L AR LGD L+VG+++D +VR
Sbjct: 344 RIVFTNGCFDILHAGHVRYLAQARALGDRLVVGLNSDASVR 384
>sp|B4EW46|HLDE_PROMH Bifunctional protein HldE OS=Proteus mirabilis (strain HI4320)
GN=hldE PE=3 SV=1
Length = 474
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 12/134 (8%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V +GCFD++H GH + L AR LGD+L+V V SDA KG PV PL +RM ++ A
Sbjct: 343 VMTNGCFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGESRPVNPLEQRMTVLGA 402
Query: 112 VKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDD--PCVLPDGTDAYELAKKAGRYK 169
+ VD V+ A +D ++L D ++ G D P D + E+ G K
Sbjct: 403 LGAVDWVV-----AFEEDTPQRLIASVLPDILVKGGDYKP---EDIAGSKEVWAAGGEVK 454
Query: 170 QIKRTEGVSSTDIV 183
+ +G+S+T+I+
Sbjct: 455 VLNFEDGISTTNII 468
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND-QTVRLKNPS 295
RI+ +G FD+ HAGHV L AR LGD L+V +++D T RLK S
Sbjct: 341 RIVMTNGCFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGES 387
>sp|A8H086|HLDE_SHEPA Bifunctional protein HldE OS=Shewanella pealeana (strain ATCC
700345 / ANG-SQ1) GN=hldE PE=3 SV=2
Length = 476
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 53 RVYM-DGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEI--IANKGPPVTPLHERMIMV 109
RV M +GCFD++H GH + L+QARALGD+L+V V +DA + + +G PV RM ++
Sbjct: 342 RVVMTNGCFDILHAGHVSYLQQARALGDRLIVAVNTDASVKRLKGEGRPVNSEDRRMTVL 401
Query: 110 NAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYK 169
A+ VD V+ P+ ++D +++ D ++ G D V D E+ G+ K
Sbjct: 402 AALASVDWVV---PF--SEDTPQRIISRLLPDLLVKGGDYKV-EDIAGGSEVMAAGGQVK 455
Query: 170 QIKRTEGVSSTDIVGRML 187
+ +G+S+T I+ ++
Sbjct: 456 VLGFEDGISTTAIIQNIM 473
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTV-RLK 292
R++ +G FD+ HAGHV L+ AR LGD L+V ++ D +V RLK
Sbjct: 342 RVVMTNGCFDILHAGHVSYLQQARALGDRLIVAVNTDASVKRLK 385
>sp|Q7N0C3|HLDE_PHOLL Bifunctional protein HldE OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=hldE PE=3 SV=1
Length = 474
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 75/133 (56%), Gaps = 10/133 (7%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V +GCFD++H GH + L AR LGD+L+V V SDA KG PV PL +RMI+++A
Sbjct: 343 VMTNGCFDILHAGHVSYLENARRLGDRLIVAVNSDASTKRLKGESRPVNPLEQRMIVLSA 402
Query: 112 VKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDG-TDAYELAKKAGRYKQ 170
+ VD V+ P+ +D ++L + D ++ G D P+ + E+ G K
Sbjct: 403 LGAVDWVV---PF--EEDTPQRLIADVLPDVLVKGGD--YKPEEIAGSEEVWAAGGDVKV 455
Query: 171 IKRTEGVSSTDIV 183
+ +G+S+T+I+
Sbjct: 456 LNFEDGISTTNII 468
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND-QTVRLKNPS 295
R++ +G FD+ HAGHV L AR LGD L+V +++D T RLK S
Sbjct: 341 RVVMTNGCFDILHAGHVSYLENARRLGDRLIVAVNSDASTKRLKGES 387
>sp|A0KPL4|HLDE_AERHH Bifunctional protein HldE OS=Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / NCIB 9240) GN=hldE PE=3 SV=1
Length = 475
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 42 LQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PV 99
+Q R + + V V +GCFD++H GH + L A LGD+L+V V +D + KGP PV
Sbjct: 332 VQAARLRGEKV-VMTNGCFDILHAGHVSYLANAGKLGDRLIVAVNTDESVRRLKGPGRPV 390
Query: 100 TPLHERMIMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAY 159
P RM ++ A+ VD V+ P+A +D ++L E D ++ G D P+ Y
Sbjct: 391 NPTERRMAVLAALGAVDWVV---PFA--EDTPQRLIAEVLPDLLVKGGD--YKPEEIAGY 443
Query: 160 -ELAKKAGRYKQIKRTEGVSSTDIVGRMLLCVRER 193
E+ G + + +G S++DI+ +RER
Sbjct: 444 AEVTANGGEVRVLNFEDGCSTSDIIK----TIRER 474
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTV-RLKNP 294
+++ +G FD+ HAGHV L A LGD L+V ++ D++V RLK P
Sbjct: 341 KVVMTNGCFDILHAGHVSYLANAGKLGDRLIVAVNTDESVRRLKGP 386
>sp|A1JQV6|HLDE_YERE8 Bifunctional protein HldE OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=hldE PE=3 SV=1
Length = 476
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 74/133 (55%), Gaps = 10/133 (7%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V +G FD++H GH + L AR LGD+L+V V SDA KG PV PL +RMI++ A
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLDQRMIVLGA 402
Query: 112 VKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDG-TDAYELAKKAGRYKQ 170
++ VD V+ P+ +D ++L + D ++ G D PD + E+ G K
Sbjct: 403 LEAVDWVV---PF--EEDTPQRLIADILPDLLVKGGD--YKPDEIAGSAEVWAAGGEVKV 455
Query: 171 IKRTEGVSSTDIV 183
+ +GVS+T+I+
Sbjct: 456 LNFEDGVSTTNII 468
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND-QTVRLKNPSVSFILLDFTLIL 307
+++ +G FD+ HAGHV L AR LGD L+V +++D T RLK LD +I+
Sbjct: 341 KVVMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLDQRMIV 399
>sp|Q0VM60|HLDE_ALCBS Bifunctional protein HldE OS=Alcanivorax borkumensis (strain SK2 /
ATCC 700651 / DSM 11573) GN=hldE PE=3 SV=1
Length = 476
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 10/136 (7%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V+ +GCFD++H GH L AR GD+LV+ V D I KGP P+ PL RM ++ A
Sbjct: 344 VFTNGCFDIIHAGHVGYLDTARRQGDRLVLAVNGDESIRRLKGPGRPINPLERRMAVLAA 403
Query: 112 VKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKK-AGRYKQ 170
++ VD V+ A D + L + D ++ G D V D +E K G K
Sbjct: 404 LEAVDWVV-----AFDTDTPEPLLESIKPDVLVKGGDYSV--DQVVGHEFVKSYGGEVKV 456
Query: 171 IKRTEGVSSTDIVGRM 186
+ + +S+T IV R+
Sbjct: 457 LDFIDDISTTKIVERI 472
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 217 EERGSGGTRVSHFLPTSRRIVQFSNGKGPGPDARIIYIDGAFDLFHAGHVEILRIARGLG 276
+E GSG +S ++ ++ + + G RI++ +G FD+ HAGHV L AR G
Sbjct: 315 QEGGSGRGVMSE----AQLLIAIEDARAQG--ERIVFTNGCFDIIHAGHVGYLDTARRQG 368
Query: 277 DFLLVGIHNDQTV-RLKNP 294
D L++ ++ D+++ RLK P
Sbjct: 369 DRLVLAVNGDESIRRLKGP 387
>sp|A1WZB3|HLDE_HALHL Bifunctional protein HldE OS=Halorhodospira halophila (strain DSM
244 / SL1) GN=hldE PE=3 SV=1
Length = 477
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 76/136 (55%), Gaps = 10/136 (7%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V +GCFD++H GH + L++AR G++LVV V DA + KG PVTPL +RM ++ A
Sbjct: 345 VMTNGCFDLLHAGHVDYLQRARRRGERLVVAVNDDASVARLKGAERPVTPLAQRMAVLAA 404
Query: 112 VKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYKQI 171
+ VD V+ P+ ++D +L + D ++ G D P+ +++ AG ++
Sbjct: 405 LDTVDWVV---PF--SEDTPARLIEAVLPDRLVKGGD--YQPEQIAGHDVVVAAGGSVEV 457
Query: 172 -KRTEGVSSTDIVGRM 186
G S+TD++ R+
Sbjct: 458 LPLLAGASTTDLIARI 473
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTV-RLKN 293
RI+ +G FDL HAGHV+ L+ AR G+ L+V +++D +V RLK
Sbjct: 343 RIVMTNGCFDLLHAGHVDYLQRARRRGERLVVAVNDDASVARLKG 387
>sp|Q2SN34|HLDE_HAHCH Bifunctional protein HldE OS=Hahella chejuensis (strain KCTC 2396)
GN=hldE PE=3 SV=1
Length = 477
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 13/100 (13%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIM--- 108
V+ +GCFD++H GH L QAR LGD+LVV + SDA + KGP P+ PL RM +
Sbjct: 343 VFTNGCFDIIHAGHVGYLDQARKLGDRLVVAINSDASVSRLKGPARPINPLERRMAVLAG 402
Query: 109 VNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDD 148
+ AV WV D P ++L + D ++ G D
Sbjct: 403 LEAVDWVTWYEDDTP--------ERLLEILKPDILVKGGD 434
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 44/82 (53%), Gaps = 17/82 (20%)
Query: 231 PTSRRIVQFSNGKGPGP-----------DAR-----IIYIDGAFDLFHAGHVEILRIARG 274
P RR VQ G G G DAR I++ +G FD+ HAGHV L AR
Sbjct: 306 PELRRAVQQEQGAGRGAMTVEQLKVALDDARAHGEKIVFTNGCFDIIHAGHVGYLDQARK 365
Query: 275 LGDFLLVGIHNDQTV-RLKNPS 295
LGD L+V I++D +V RLK P+
Sbjct: 366 LGDRLVVAINSDASVSRLKGPA 387
>sp|O58466|RIBL_PYRHO FAD synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ribL PE=3 SV=1
Length = 148
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 50 KPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKG-PPVTPLHERMIM 108
+ +RV + G FD++H GH + L+ A+ LGD+L+V V D + KG PP+ P +R +
Sbjct: 5 RKIRVVVGGVFDIIHAGHVHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDRAEV 64
Query: 109 VNAVKWVDEVISDAPYAITKDFMKKL 134
+ A+++VD+V+ P I+ D +K+L
Sbjct: 65 LKAIRYVDDVVIGKPGEISLDLIKRL 90
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 246 GPDARI-IYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTVR 290
G D +I + + G FD+ HAGHV L++A+ LGD L+V + +D+TV+
Sbjct: 2 GSDRKIRVVVGGVFDIIHAGHVHFLKMAKELGDELIVIVAHDETVK 47
>sp|Q5JHT4|RIBL_PYRKO FAD synthase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM
12380 / KOD1) GN=ribL PE=3 SV=1
Length = 149
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 14/114 (12%)
Query: 47 KKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEI-IANKGPPVTPLHER 105
+K+K +RV + G FD++H GH + L+QA+ LGD+LVV V D + + + P+ P +R
Sbjct: 3 EKRKKIRVLVGGVFDILHVGHIHFLKQAKELGDELVVIVAHDETVRMQKRREPINPAEDR 62
Query: 106 MIMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAY 159
++ A+++VDEV P I + +K++ DP V+ G D +
Sbjct: 63 AELLRAIRYVDEVYIGTPGTIDMELVKRI-------------DPDVIAIGPDQF 103
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 252 IYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTVRLKN 293
+ + G FD+ H GH+ L+ A+ LGD L+V + +D+TVR++
Sbjct: 10 VLVGGVFDILHVGHIHFLKQAKELGDELVVIVAHDETVRMQK 51
>sp|Q1I411|HLDE_PSEE4 Bifunctional protein HldE OS=Pseudomonas entomophila (strain L48)
GN=hldE PE=3 SV=1
Length = 473
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V+ +GCFD++H GH L QARA GD+L+V + DA + KGP P+ + RM ++
Sbjct: 342 VFTNGCFDILHAGHVTYLEQARAQGDRLIVAINDDASVSRLKGPGRPINSVDRRMAVLAG 401
Query: 112 VKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYKQI 171
+ VD VIS P A ++ ++++ + + +G D V D AY G K +
Sbjct: 402 LGAVDWVIS-FPEATPENLLRQVKPDVLVKGGDYGIDQVVGADIVKAY-----GGTVKVL 455
Query: 172 KRTEGVSSTDIVGRM 186
E S+T IV ++
Sbjct: 456 GLVENSSTTAIVEKI 470
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 17/81 (20%)
Query: 231 PTSRRIVQFSNGKGPG-----------PDAR-----IIYIDGAFDLFHAGHVEILRIARG 274
P RR +Q G G DAR I++ +G FD+ HAGHV L AR
Sbjct: 305 PELRRAIQREEGSERGVLSLEQLLLAIDDARAHNETIVFTNGCFDILHAGHVTYLEQARA 364
Query: 275 LGDFLLVGIHNDQTV-RLKNP 294
GD L+V I++D +V RLK P
Sbjct: 365 QGDRLIVAINDDASVSRLKGP 385
>sp|Q9UZ37|RIBL_PYRAB FAD synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ribL PE=3
SV=1
Length = 148
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKG-PPVTPLHERMIMVN 110
+RV + G FD++H GH + L+ A+ LGD+L+V V D + KG PP+ P +R ++
Sbjct: 7 IRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDRAEVLR 66
Query: 111 AVKWVDEVISDAPYAITKDFMKKL 134
A+++VD+V+ P I+ + +KKL
Sbjct: 67 AIRYVDDVVIGEPGEISLELIKKL 90
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 252 IYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTVR 290
+ + G FD+ H GH+ L++A+ LGD L+V + +D+TV+
Sbjct: 9 VVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVK 47
>sp|A8APT1|HLDE_CITK8 Bifunctional protein HldE OS=Citrobacter koseri (strain ATCC
BAA-895 / CDC 4225-83 / SGSC4696) GN=hldE PE=3 SV=1
Length = 477
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 28/171 (16%)
Query: 26 GFSLLTLYLAAPNDRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGV 85
GF ++T A + + RK+ + V V +G FD++H GH + L AR LGD+L+V V
Sbjct: 319 GFGVMT---EAELKQAVASARKRGEKV-VMTNGVFDILHAGHVSYLANARKLGDRLIVAV 374
Query: 86 VSDAEIIANKGP--PVTPLHERMIMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYI 143
SDA KG PV PL +RMI++ A++ VD V+S FDE +
Sbjct: 375 NSDASTKRLKGETRPVNPLEQRMIVLGALESVDWVVS--------------FDEDTPQRL 420
Query: 144 IHGDDPCVLPDGTD--------AYELAKKAGRYKQIKRTEGVSSTDIVGRM 186
I G P +L G D + E+ G + +G S+T+I+ ++
Sbjct: 421 IAGVLPDLLVKGGDYKPEEIAGSEEVWANGGEVLVLNFEDGCSTTNIIKKI 471
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND-QTVRLK 292
+++ +G FD+ HAGHV L AR LGD L+V +++D T RLK
Sbjct: 341 KVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLK 384
>sp|B1JM26|HLDE_YERPY Bifunctional protein HldE OS=Yersinia pseudotuberculosis serotype
O:3 (strain YPIII) GN=hldE PE=3 SV=1
Length = 476
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V +G FD++H GH + L AR LGD+L+V V SDA KG PV PL +RM+++ A
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVLGA 402
Query: 112 VKWVDEVI---SDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRY 168
++ VD V+ D P + D + L + DY H + + E+ G
Sbjct: 403 LEAVDWVVPFEEDTPQRLIADILPDLLVKGG-DYKPH--------EIAGSEEVWAAGGEV 453
Query: 169 KQIKRTEGVSSTDIV 183
K + +GVS+T+I+
Sbjct: 454 KVLNFEDGVSTTNII 468
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND-QTVRLK 292
+++ +G FD+ HAGHV L AR LGD L+V +++D T RLK
Sbjct: 341 KVVMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLK 384
>sp|Q665V3|HLDE_YERPS Bifunctional protein HldE OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=hldE PE=3 SV=1
Length = 476
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V +G FD++H GH + L AR LGD+L+V V SDA KG PV PL +RM+++ A
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVLGA 402
Query: 112 VKWVDEVI---SDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRY 168
++ VD V+ D P + D + L + DY H + + E+ G
Sbjct: 403 LEAVDWVVPFEEDTPQRLIADILPDLLVKGG-DYKPH--------EIAGSEEVWAAGGEV 453
Query: 169 KQIKRTEGVSSTDIV 183
K + +GVS+T+I+
Sbjct: 454 KVLNFEDGVSTTNII 468
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND-QTVRLK 292
+++ +G FD+ HAGHV L AR LGD L+V +++D T RLK
Sbjct: 341 KVVMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLK 384
>sp|B2K2H4|HLDE_YERPB Bifunctional protein HldE OS=Yersinia pseudotuberculosis serotype
IB (strain PB1/+) GN=hldE PE=3 SV=1
Length = 476
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V +G FD++H GH + L AR LGD+L+V V SDA KG PV PL +RM+++ A
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVLGA 402
Query: 112 VKWVDEVI---SDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRY 168
++ VD V+ D P + D + L + DY H + + E+ G
Sbjct: 403 LEAVDWVVPFEEDTPQRLIADILPDLLVKGG-DYKPH--------EIAGSEEVWAAGGEV 453
Query: 169 KQIKRTEGVSSTDIV 183
K + +GVS+T+I+
Sbjct: 454 KVLNFEDGVSTTNII 468
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND-QTVRLK 292
+++ +G FD+ HAGHV L AR LGD L+V +++D T RLK
Sbjct: 341 KVVMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLK 384
>sp|A7FE79|HLDE_YERP3 Bifunctional protein HldE OS=Yersinia pseudotuberculosis serotype
O:1b (strain IP 31758) GN=hldE PE=3 SV=1
Length = 476
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V +G FD++H GH + L AR LGD+L+V V SDA KG PV PL +RM+++ A
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVLGA 402
Query: 112 VKWVDEVI---SDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRY 168
++ VD V+ D P + D + L + DY H + + E+ G
Sbjct: 403 LEAVDWVVPFEEDTPQRLIADILPDLLVKGG-DYKPH--------EIAGSEEVWAAGGEV 453
Query: 169 KQIKRTEGVSSTDIV 183
K + +GVS+T+I+
Sbjct: 454 KVLNFEDGVSTTNII 468
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND-QTVRLK 292
+++ +G FD+ HAGHV L AR LGD L+V +++D T RLK
Sbjct: 341 KVVMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLK 384
>sp|C1DGT9|HLDE_AZOVD Bifunctional protein HldE OS=Azotobacter vinelandii (strain DJ /
ATCC BAA-1303) GN=hldE PE=3 SV=1
Length = 474
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V+ +GCFD++H GH L QARA GD+L+V V DA + KGP P+ + RM ++
Sbjct: 342 VFTNGCFDILHAGHVTYLEQARAQGDRLIVAVNDDASVTRLKGPGRPINTVDRRMAVLAG 401
Query: 112 VKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDD 148
+ VD VIS A +D ++L ++ D ++ G D
Sbjct: 402 LGAVDWVISFA-----EDTPERLLEQIRPDVLVKGGD 433
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTV-RLKNP 294
+I++ +G FD+ HAGHV L AR GD L+V +++D +V RLK P
Sbjct: 340 KIVFTNGCFDILHAGHVTYLEQARAQGDRLIVAVNDDASVTRLKGP 385
>sp|A4THT9|HLDE_YERPP Bifunctional protein HldE OS=Yersinia pestis (strain Pestoides F)
GN=hldE PE=3 SV=1
Length = 476
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V +G FD++H GH + L AR LGD+L+V V SDA KG PV PL +RM+++ A
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVLGA 402
Query: 112 VKWVDEVI---SDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRY 168
++ VD V+ D P + D + L + DY H + + E+ G
Sbjct: 403 LEAVDWVVPFEEDTPQRLIADILPDLLVKGG-DYKPH--------EIAGSEEVWAAGGEV 453
Query: 169 KQIKRTEGVSSTDIV 183
K + +GVS+T+I+
Sbjct: 454 KVLNFEDGVSTTNII 468
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND-QTVRLK 292
+++ +G FD+ HAGHV L AR LGD L+V +++D T RLK
Sbjct: 341 KVVMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLK 384
>sp|Q1CMD4|HLDE_YERPN Bifunctional protein HldE OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=hldE PE=3 SV=1
Length = 476
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V +G FD++H GH + L AR LGD+L+V V SDA KG PV PL +RM+++ A
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVLGA 402
Query: 112 VKWVDEVI---SDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRY 168
++ VD V+ D P + D + L + DY H + + E+ G
Sbjct: 403 LEAVDWVVPFEEDTPQRLIADILPDLLVKGG-DYKPH--------EIAGSEEVWAAGGEV 453
Query: 169 KQIKRTEGVSSTDIV 183
K + +GVS+T+I+
Sbjct: 454 KVLNFEDGVSTTNII 468
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND-QTVRLK 292
+++ +G FD+ HAGHV L AR LGD L+V +++D T RLK
Sbjct: 341 KVVMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLK 384
>sp|A9R7D5|HLDE_YERPG Bifunctional protein HldE OS=Yersinia pestis bv. Antiqua (strain
Angola) GN=hldE PE=3 SV=1
Length = 476
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V +G FD++H GH + L AR LGD+L+V V SDA KG PV PL +RM+++ A
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVLGA 402
Query: 112 VKWVDEVI---SDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRY 168
++ VD V+ D P + D + L + DY H + + E+ G
Sbjct: 403 LEAVDWVVPFEEDTPQRLIADILPDLLVKGG-DYKPH--------EIAGSEEVWAAGGEV 453
Query: 169 KQIKRTEGVSSTDIV 183
K + +GVS+T+I+
Sbjct: 454 KVLNFEDGVSTTNII 468
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND-QTVRLK 292
+++ +G FD+ HAGHV L AR LGD L+V +++D T RLK
Sbjct: 341 KVVMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLK 384
>sp|Q8ZI60|HLDE_YERPE Bifunctional protein HldE OS=Yersinia pestis GN=hldE PE=3 SV=1
Length = 476
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V +G FD++H GH + L AR LGD+L+V V SDA KG PV PL +RM+++ A
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVLGA 402
Query: 112 VKWVDEVI---SDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRY 168
++ VD V+ D P + D + L + DY H + + E+ G
Sbjct: 403 LEAVDWVVPFEEDTPQRLIADILPDLLVKGG-DYKPH--------EIAGSEEVWAAGGEV 453
Query: 169 KQIKRTEGVSSTDIV 183
K + +GVS+T+I+
Sbjct: 454 KVLNFEDGVSTTNII 468
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND-QTVRLK 292
+++ +G FD+ HAGHV L AR LGD L+V +++D T RLK
Sbjct: 341 KVVMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLK 384
>sp|Q1C374|HLDE_YERPA Bifunctional protein HldE OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=hldE PE=3 SV=1
Length = 476
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNA 111
V +G FD++H GH + L AR LGD+L+V V SDA KG PV PL +RM+++ A
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVLGA 402
Query: 112 VKWVDEVI---SDAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRY 168
++ VD V+ D P + D + L + DY H + + E+ G
Sbjct: 403 LEAVDWVVPFEEDTPQRLIADILPDLLVKGG-DYKPH--------EIAGSEEVWAAGGEV 453
Query: 169 KQIKRTEGVSSTDIV 183
K + +GVS+T+I+
Sbjct: 454 KVLNFEDGVSTTNII 468
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND-QTVRLK 292
+++ +G FD+ HAGHV L AR LGD L+V +++D T RLK
Sbjct: 341 KVVMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLK 384
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,563,875
Number of Sequences: 539616
Number of extensions: 5111081
Number of successful extensions: 13640
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 12820
Number of HSP's gapped (non-prelim): 756
length of query: 307
length of database: 191,569,459
effective HSP length: 117
effective length of query: 190
effective length of database: 128,434,387
effective search space: 24402533530
effective search space used: 24402533530
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)