Query 021802
Match_columns 307
No_of_seqs 342 out of 2551
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 09:31:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021802.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021802hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3elb_A Ethanolamine-phosphate 100.0 7.7E-55 2.6E-59 417.9 23.1 237 47-293 3-244 (341)
2 3hl4_A Choline-phosphate cytid 100.0 4.3E-32 1.5E-36 247.6 16.9 144 43-190 68-213 (236)
3 3elb_A Ethanolamine-phosphate 100.0 7.8E-28 2.7E-32 230.7 15.2 139 46-188 193-336 (341)
4 2b7l_A Glycerol-3-phosphate cy 99.9 5.4E-24 1.8E-28 176.3 11.9 127 52-189 2-129 (132)
5 1coz_A Protein (glycerol-3-pho 99.9 6.9E-24 2.4E-28 174.8 11.6 126 52-188 2-128 (129)
6 3glv_A Lipopolysaccharide core 99.9 1E-23 3.4E-28 178.2 8.9 132 51-190 2-139 (143)
7 3op1_A Macrolide-efflux protei 99.9 5.2E-22 1.8E-26 187.9 14.4 136 51-189 20-177 (308)
8 2x0k_A Riboflavin biosynthesis 99.8 5.2E-21 1.8E-25 183.2 10.4 136 52-189 16-174 (338)
9 1mrz_A Riboflavin kinase/FMN a 99.8 1.7E-20 5.8E-25 176.5 11.5 130 54-189 2-147 (293)
10 3k9w_A Phosphopantetheine aden 99.8 8.7E-19 3E-23 155.1 10.0 129 51-189 22-159 (187)
11 1qjc_A Phosphopantetheine aden 99.8 3E-18 1E-22 145.0 10.2 128 52-189 2-138 (158)
12 1o6b_A Phosphopantetheine aden 99.7 6.2E-18 2.1E-22 145.3 11.0 129 52-189 3-139 (169)
13 3nv7_A Phosphopantetheine aden 99.7 1.5E-18 5.1E-23 149.6 4.3 125 52-189 3-139 (157)
14 2qtr_A Nicotinate (nicotinamid 99.7 1.9E-17 6.6E-22 144.1 10.7 133 52-189 3-166 (189)
15 4f3r_A Phosphopantetheine aden 99.7 2E-17 6.9E-22 143.1 7.8 128 52-189 6-141 (162)
16 1kam_A Deamido-NAD(+), nicotin 99.7 5.8E-16 2E-20 136.1 16.0 132 52-189 8-171 (194)
17 1od6_A PPAT, phosphopantethein 99.7 5.7E-16 1.9E-20 131.4 13.1 122 54-189 3-139 (160)
18 3f3m_A Phosphopantetheine aden 99.6 2.9E-16 9.8E-21 136.6 9.4 124 52-189 4-140 (168)
19 1k4m_A NAMN adenylyltransferas 99.6 9.7E-16 3.3E-20 136.6 10.8 92 54-149 6-110 (213)
20 3nbk_A Phosphopantetheine aden 99.6 1.1E-15 3.9E-20 134.0 10.4 131 48-189 18-157 (177)
21 3nd5_A Phosphopantetheine aden 99.6 9.8E-16 3.3E-20 133.6 7.8 125 52-189 3-140 (171)
22 1vlh_A Phosphopantetheine aden 99.6 3.1E-15 1E-19 130.0 9.2 123 52-189 13-149 (173)
23 1yum_A 'probable nicotinate-nu 99.6 1.2E-14 4.2E-19 132.8 11.6 94 51-148 23-129 (242)
24 2h29_A Probable nicotinate-nuc 99.5 3.8E-14 1.3E-18 123.9 9.4 132 52-189 3-166 (189)
25 1ej2_A Nicotinamide mononucleo 99.5 9E-14 3.1E-18 121.0 9.9 123 53-189 5-142 (181)
26 3gmi_A UPF0348 protein MJ0951; 99.5 2.5E-13 8.5E-18 130.9 13.6 93 49-147 50-151 (357)
27 2qjo_A Bifunctional NMN adenyl 99.5 8.5E-14 2.9E-18 130.2 10.1 130 51-190 7-152 (341)
28 3do8_A Phosphopantetheine aden 99.5 1.5E-14 5.2E-19 123.2 3.2 125 53-188 2-142 (148)
29 3h05_A Uncharacterized protein 99.4 3.4E-13 1.2E-17 118.0 9.5 132 52-189 3-149 (177)
30 1f9a_A Hypothetical protein MJ 99.4 7.5E-12 2.6E-16 107.6 14.7 125 53-189 2-136 (168)
31 1kqn_A Nmnat, nicotinamide mon 99.3 5.4E-12 1.8E-16 117.6 11.1 84 50-138 7-106 (279)
32 2ejc_A Pantoate--beta-alanine 99.3 2.2E-13 7.6E-18 127.3 0.8 136 44-183 16-190 (280)
33 1nup_A FKSG76; NAD biosynthesi 99.2 2.8E-11 9.7E-16 110.8 9.8 88 51-138 6-104 (252)
34 1lw7_A Transcriptional regulat 99.2 1.1E-10 3.8E-15 111.2 13.1 128 52-186 3-154 (365)
35 3hl4_A Choline-phosphate cytid 99.2 9.5E-12 3.3E-16 113.4 5.3 51 243-293 70-122 (236)
36 2qjt_B Nicotinamide-nucleotide 99.1 1E-09 3.4E-14 103.3 13.1 129 52-188 8-152 (352)
37 1v8f_A Pantoate-beta-alanine l 99.0 1.8E-11 6E-16 114.2 -1.7 127 52-183 20-186 (276)
38 3ag6_A Pantothenate synthetase 98.9 4.1E-10 1.4E-14 105.3 3.6 135 44-183 17-191 (283)
39 3nv7_A Phosphopantetheine aden 98.7 1.3E-08 4.3E-13 87.4 6.1 39 249-287 2-40 (157)
40 3glv_A Lipopolysaccharide core 98.7 1.2E-08 4E-13 85.6 5.0 42 249-290 2-43 (143)
41 4f3r_A Phosphopantetheine aden 98.6 1.6E-08 5.6E-13 87.1 4.7 39 249-287 5-43 (162)
42 3cov_A Pantothenate synthetase 98.6 5.3E-09 1.8E-13 98.5 0.4 126 54-182 35-201 (301)
43 2b7l_A Glycerol-3-phosphate cy 98.6 4.2E-08 1.4E-12 80.4 5.5 39 250-288 2-40 (132)
44 1coz_A Protein (glycerol-3-pho 98.6 4.5E-08 1.5E-12 79.8 5.4 38 250-287 2-39 (129)
45 1jhd_A Sulfate adenylyltransfe 98.5 1.2E-06 4.1E-11 85.4 13.9 133 53-190 194-372 (396)
46 1v47_A ATP sulfurylase; produc 98.5 2.3E-06 7.7E-11 82.1 15.2 146 39-190 144-330 (349)
47 3nbk_A Phosphopantetheine aden 98.5 1E-07 3.4E-12 83.5 5.3 42 246-287 18-59 (177)
48 3do8_A Phosphopantetheine aden 98.5 6.3E-08 2.2E-12 82.1 3.1 48 251-298 2-51 (148)
49 1vlh_A Phosphopantetheine aden 98.4 2.1E-07 7.1E-12 80.4 6.0 39 249-287 12-50 (173)
50 3nd5_A Phosphopantetheine aden 98.4 2.1E-07 7.1E-12 80.8 5.5 39 249-287 2-40 (171)
51 3k9w_A Phosphopantetheine aden 98.4 2.4E-07 8.3E-12 81.5 5.5 39 249-287 22-60 (187)
52 3f3m_A Phosphopantetheine aden 98.4 2.4E-07 8.3E-12 80.2 5.0 39 249-287 3-41 (168)
53 1qjc_A Phosphopantetheine aden 98.2 1.4E-06 4.6E-11 73.0 5.4 39 249-287 1-39 (158)
54 1lw7_A Transcriptional regulat 98.1 2E-06 6.7E-11 81.7 5.3 41 249-289 2-42 (365)
55 2qjt_B Nicotinamide-nucleotide 98.1 1.9E-06 6.6E-11 80.7 4.5 41 249-289 7-47 (352)
56 1ej2_A Nicotinamide mononucleo 98.0 5.5E-06 1.9E-10 71.5 5.2 37 250-286 4-40 (181)
57 1o6b_A Phosphopantetheine aden 98.0 5.7E-06 1.9E-10 70.4 4.6 38 249-286 2-39 (169)
58 1f9a_A Hypothetical protein MJ 97.9 7.8E-06 2.7E-10 69.8 5.2 36 251-286 2-38 (168)
59 2qtr_A Nicotinate (nicotinamid 97.9 7E-06 2.4E-10 70.7 3.7 41 249-289 2-44 (189)
60 1od6_A PPAT, phosphopantethein 97.9 1.1E-05 3.8E-10 67.6 4.8 36 252-287 3-38 (160)
61 1kam_A Deamido-NAD(+), nicotin 97.8 1.5E-05 5.2E-10 69.3 4.9 39 249-287 7-47 (194)
62 2ejc_A Pantoate--beta-alanine 97.8 1.5E-05 5.2E-10 74.3 4.6 42 248-290 21-64 (280)
63 1yum_A 'probable nicotinate-nu 97.8 2E-05 6.8E-10 71.6 5.1 39 249-287 23-63 (242)
64 2qjo_A Bifunctional NMN adenyl 97.8 1.3E-05 4.6E-10 74.4 3.8 40 249-288 7-46 (341)
65 2h29_A Probable nicotinate-nuc 97.7 2.1E-05 7E-10 68.2 4.7 40 250-289 3-44 (189)
66 3uk2_A Pantothenate synthetase 97.7 9.6E-05 3.3E-09 68.9 8.5 67 53-120 23-92 (283)
67 3h05_A Uncharacterized protein 97.5 4.9E-05 1.7E-09 66.0 3.5 37 249-286 2-38 (177)
68 3inn_A Pantothenate synthetase 97.4 0.00064 2.2E-08 64.1 10.5 75 41-120 34-113 (314)
69 1k4m_A NAMN adenylyltransferas 97.4 5.7E-05 1.9E-09 66.7 2.9 40 250-289 3-45 (213)
70 3q12_A Pantoate--beta-alanine 97.2 0.00078 2.7E-08 62.8 8.2 75 41-120 16-95 (287)
71 1nup_A FKSG76; NAD biosynthesi 96.8 0.00041 1.4E-08 63.0 2.4 36 249-284 6-45 (252)
72 1kqn_A Nmnat, nicotinamide mon 96.7 0.00051 1.8E-08 63.6 2.0 37 247-283 6-47 (279)
73 3mxt_A Pantothenate synthetase 96.7 0.0075 2.6E-07 56.2 9.8 74 42-120 17-94 (285)
74 1r6x_A ATP:sulfate adenylyltra 96.6 0.11 3.7E-06 50.5 17.6 105 39-150 176-292 (395)
75 2x0k_A Riboflavin biosynthesis 96.5 0.0012 4.1E-08 62.8 3.3 40 249-288 15-57 (338)
76 3q12_A Pantoate--beta-alanine 96.3 0.0043 1.5E-07 57.8 5.6 36 248-286 24-61 (287)
77 1g8f_A Sulfate adenylyltransfe 96.1 0.25 8.6E-06 49.3 17.8 106 39-150 177-293 (511)
78 3op1_A Macrolide-efflux protei 96.1 0.0032 1.1E-07 59.3 3.6 39 249-287 20-61 (308)
79 3gmi_A UPF0348 protein MJ0951; 95.4 0.018 6E-07 55.3 5.8 36 248-285 51-86 (357)
80 3n8h_A Pantothenate synthetase 95.4 0.05 1.7E-06 50.1 8.4 66 54-120 26-94 (264)
81 3mxt_A Pantothenate synthetase 94.5 0.039 1.3E-06 51.3 5.1 35 248-286 24-60 (285)
82 3inn_A Pantothenate synthetase 94.2 0.045 1.5E-06 51.6 5.0 37 248-287 42-80 (314)
83 2gks_A Bifunctional SAT/APS ki 93.2 0.69 2.4E-05 46.3 12.0 104 41-150 154-269 (546)
84 3ag6_A Pantothenate synthetase 92.8 0.14 4.6E-06 47.7 5.6 37 248-287 22-60 (283)
85 3n8h_A Pantothenate synthetase 92.2 0.081 2.8E-06 48.7 3.2 39 247-286 22-60 (264)
86 1v8f_A Pantoate-beta-alanine l 92.0 0.15 5E-06 47.3 4.8 34 251-287 21-54 (276)
87 3cr8_A Sulfate adenylyltranfer 91.4 2.5 8.5E-05 42.4 13.4 106 39-150 152-268 (552)
88 1x6v_B Bifunctional 3'-phospho 91.0 5.6 0.00019 40.6 15.7 104 40-150 402-525 (630)
89 3cov_A Pantothenate synthetase 90.8 0.25 8.7E-06 46.2 5.2 38 249-287 33-71 (301)
90 1m8p_A Sulfate adenylyltransfe 90.1 1.6 5.6E-05 43.9 10.8 106 39-150 179-295 (573)
91 3uk2_A Pantothenate synthetase 89.2 0.34 1.2E-05 45.0 4.6 39 248-287 21-59 (283)
92 1v47_A ATP sulfurylase; produc 81.6 0.83 2.8E-05 43.5 3.2 31 252-282 158-188 (349)
93 1jhd_A Sulfate adenylyltransfe 79.9 0.79 2.7E-05 44.4 2.4 29 252-280 195-225 (396)
94 2l2t_A Receptor tyrosine-prote 46.1 18 0.00061 24.2 3.1 28 5-32 4-31 (44)
95 1m8p_A Sulfate adenylyltransfe 30.4 32 0.0011 34.4 3.5 30 252-281 193-223 (573)
96 2ks1_B Epidermal growth factor 29.1 29 0.001 23.1 2.0 25 8-32 8-32 (44)
97 2nuw_A 2-keto-3-deoxygluconate 26.9 2.1E+02 0.0071 25.6 8.1 55 98-152 47-104 (288)
98 1w3i_A EDA, 2-keto-3-deoxy glu 26.5 1.9E+02 0.0066 25.9 7.8 55 98-152 47-104 (293)
99 3tha_A Tryptophan synthase alp 26.4 60 0.0021 29.1 4.3 68 52-135 89-161 (252)
100 3nav_A Tryptophan synthase alp 25.1 60 0.002 29.4 4.0 91 40-145 86-179 (271)
101 2pp6_A Gifsy-2 prophage ATP-bi 24.0 43 0.0015 26.3 2.4 22 232-253 51-72 (102)
102 1g8f_A Sulfate adenylyltransfe 22.0 53 0.0018 32.5 3.3 29 252-280 191-220 (511)
103 2r91_A 2-keto-3-deoxy-(6-phosp 21.8 1.8E+02 0.0062 25.9 6.6 55 98-152 46-103 (286)
104 1qo2_A Molecule: N-((5-phospho 21.7 2.1E+02 0.0072 24.3 6.8 11 175-185 195-206 (241)
105 2gks_A Bifunctional SAT/APS ki 20.0 73 0.0025 31.5 3.8 30 252-281 166-196 (546)
No 1
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.7e-55 Score=417.90 Aligned_cols=237 Identities=49% Similarity=0.856 Sum_probs=196.4
Q ss_pred cCCCCeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHHccCccEEEEcCCCcc
Q 021802 47 KKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVKWVDEVISDAPYAI 126 (307)
Q Consensus 47 ~~~~~~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~~k~VD~Vv~~~py~~ 126 (307)
..+++++||+.||||++|.||+++|++|++++|+|+|||++|+.+...|++|++|.+||++++++|+|||+|++..||..
T Consensus 3 ~~~~~~~v~~~G~FD~lH~GH~~lL~~A~~l~d~LiVgV~~d~~v~~~K~~pi~s~eER~~~l~~l~~VD~Vv~f~~~~~ 82 (341)
T 3elb_A 3 GGRRAVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYVT 82 (341)
T ss_dssp -CCCCCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEECCHHHHHHHSSCCSSCHHHHHHHHHHBTTCCEEEETCCSSC
T ss_pred CCCCceEEEEEeeCCCCCHHHHHHHHHHHHhCCcCEEEeecCHHHhccCCCCCCCHHHHHHHHHHcCCCCEEEecCCCCC
Confidence 34667789999999999999999999999999999999999998776777899999999999999999999999778777
Q ss_pred cHHHHHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHhCCEEEEcCCCCCCCHHHHHHHHHhhhhcCCccCcC--Ccchh
Q 021802 127 TKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYKQIKRTEGVSSTDIVGRMLLCVRERSISDSH--NHSSL 204 (307)
Q Consensus 127 t~dfle~ll~~l~~d~VV~GdD~~fg~~g~d~y~~lk~~g~v~vv~rt~~VSST~Ir~rIl~~~~~~~~~~~~--~~~~~ 204 (307)
+++|+ ++++||++|+|+||++|.++.+.|+.++++|+++.+++++++|||+|++||++++++|+..... ...+.
T Consensus 83 ~~efi----~~~~~d~vV~G~D~~~g~~~~~~~~~~k~~G~~~~~~~t~g~STT~ii~ri~~~~~~~~~~~~~~~~~~~~ 158 (341)
T 3elb_A 83 TLETL----DKYNCDFCVHGNDITLTVDGRDTYEEVKQAGRYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREY 158 (341)
T ss_dssp CHHHH----HHTTCSEEEECSCCCBCTTSCBTTHHHHHTTCEEECCCCTTCCHHHHHHHHHC------------------
T ss_pred HHHHH----HHhCCCEEEECCCCCCCCCCcchHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhccccccccccchhhHHH
Confidence 78887 4689999999999999999999999999999999999999999999999999999987653211 11122
Q ss_pred hhhhccCCCccccccccc-cccccccccccceehcccCCCCCCCCCeEEEEeCcccccCHHHHHHHHHHHhCCC--EEEE
Q 021802 205 QRQFSHGHNQKVEERGSG-GTRVSHFLPTSRRIVQFSNGKGPGPDARIIYIDGAFDLFHAGHVEILRIARGLGD--FLLV 281 (307)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~i~~f~~~~~~~~~~~~v~~~G~FDl~H~GHi~~L~~a~~~g~--~liV 281 (307)
...++++.. +.+ |+.+++|++|+++|.||++|+.|.+++++||++|+||+||.||+++|++|+++|| +|||
T Consensus 159 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~f~~g~~~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~D~~~LiV 232 (341)
T 3elb_A 159 ADSFGKCPG------GRNPWTGVSQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIA 232 (341)
T ss_dssp -------------------CCCCCCCCCCHHHHHHHCCCCCCCTTCEEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEE
T ss_pred HHhhccCcc------ccCCCcceecccCCcceeeeeccCCCCCCCCEEEEEecccCCCCHHHHHHHHHHHHhCCCCEEEE
Confidence 233443322 223 7888999999999999999999999999999999999999999999999999999 9999
Q ss_pred EEeCcccccccC
Q 021802 282 GIHNDQTVRLKN 293 (307)
Q Consensus 282 gv~~D~~v~~~~ 293 (307)
||++|+++++.|
T Consensus 233 gV~~d~~v~~~K 244 (341)
T 3elb_A 233 GLHFDQEVNHYK 244 (341)
T ss_dssp EEECHHHHHHHH
T ss_pred EEccCHhhHhhc
Confidence 999999988654
No 2
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.98 E-value=4.3e-32 Score=247.62 Aligned_cols=144 Identities=39% Similarity=0.619 Sum_probs=131.4
Q ss_pred HhhhcCCCCeEEEEecccCcCCHHHHHHHHHHHHc--CCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHHccCccEEEE
Q 021802 43 QWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARAL--GDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVKWVDEVIS 120 (307)
Q Consensus 43 ~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qAk~~--gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~~k~VD~Vv~ 120 (307)
....+.+++++||+.|+||++|.||+++|++|+++ +|+|+|||++|+.+...|++|+|+.+||++++++|+|||+|++
T Consensus 68 ~~~~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg~pi~s~eER~e~v~~~k~VD~Vvv 147 (236)
T 3hl4_A 68 CRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVR 147 (236)
T ss_dssp HHCCCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTCCCSSCHHHHHHHHHTBTTCSEEES
T ss_pred hcCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCCCCCCCHHHHHHHHHHhCCCCeEEE
Confidence 33345567889999999999999999999999999 5899999999998877788899999999999999999999999
Q ss_pred cCCCcccHHHHHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHhCCEEEEcCCCCCCCHHHHHHHHHhhh
Q 021802 121 DAPYAITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYKQIKRTEGVSSTDIVGRMLLCV 190 (307)
Q Consensus 121 ~~py~~t~dfle~ll~~l~~d~VV~GdD~~fg~~g~d~y~~lk~~g~v~vv~rt~~VSST~Ir~rIl~~~ 190 (307)
++||.++.+|++ +++||+||+|+|+.++.++.|.|+.+++.|++..++|++++|||+|++||+...
T Consensus 148 ~~p~~l~~d~i~----~~~~d~Vv~GDd~~~~~~~~d~y~~lk~~G~~~~v~rt~giSTT~Ii~RI~~~~ 213 (236)
T 3hl4_A 148 NAPWTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDY 213 (236)
T ss_dssp SCCSSCCHHHHH----HTTCCEEEEESSCCCCSSCSCTTHHHHHTTCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred CCcCcCcHHHHH----HcCCCEEEECCccccCCCchhHHHHHHhCCeEEEeccCCCCCHHHHHHHHHHhH
Confidence 999998888874 689999999999988888889999999999999999999999999999998653
No 3
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.95 E-value=7.8e-28 Score=230.68 Aligned_cols=139 Identities=31% Similarity=0.619 Sum_probs=126.0
Q ss_pred hcCCCCeEEEEecccCcCCHHHHHHHHHHHHcCC--eEEEEEeCChhhhhcCC--CCCCCHHHHHHHHHHccCccEEEEc
Q 021802 46 RKKKKPVRVYMDGCFDMMHYGHCNALRQARALGD--QLVVGVVSDAEIIANKG--PPVTPLHERMIMVNAVKWVDEVISD 121 (307)
Q Consensus 46 ~~~~~~~~V~~~G~FD~lH~GH~~lL~qAk~~gd--~LiVgV~sD~~i~~~Kg--~pi~s~eER~~ll~~~k~VD~Vv~~ 121 (307)
.+.+..++|++.||||++|.||+++|++|++++| +|+|||++|+.+...|+ +|+||.+||++++++|++||+|+++
T Consensus 193 ~~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~D~~~LiVgV~~d~~v~~~Kg~~~pi~~~~ER~~~v~~~~~vd~V~v~ 272 (341)
T 3elb_A 193 EPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLACRYVSEVVIG 272 (341)
T ss_dssp CCCTTCEEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHHTBTTCCEEEEE
T ss_pred CCCCCCEEEEEecccCCCCHHHHHHHHHHHHhCCCCEEEEEEccCHhhHhhcCCCCCCCCHHHHHHHHHHcCCCCCEEEC
Confidence 3444567899999999999999999999999999 99999999998887787 5999999999999999999999999
Q ss_pred CCCcccHHHHHHHHHhcCccEEEEcCCCCc-CCCCCchHHHHHhCCEEEEcCCCCCCCHHHHHHHHHh
Q 021802 122 APYAITKDFMKKLFDEYNIDYIIHGDDPCV-LPDGTDAYELAKKAGRYKQIKRTEGVSSTDIVGRMLL 188 (307)
Q Consensus 122 ~py~~t~dfle~ll~~l~~d~VV~GdD~~f-g~~g~d~y~~lk~~g~v~vv~rt~~VSST~Ir~rIl~ 188 (307)
+||.++.+|++ +++++++|+|+|+.. ...|.|.|...+.+|+++.+++++++|||+|++||+.
T Consensus 273 ~~~~l~~~~~~----~~~~~~iv~G~d~~~~~~~g~d~y~~~k~~G~~~~i~~~~~~STt~ii~RI~~ 336 (341)
T 3elb_A 273 APYAVTAELLS----HFKVDLVCHGKTEIIPDRDGSDPYQEPKRRGIFRQIDSGSNLTTDLIVQRIIT 336 (341)
T ss_dssp ECSSCCHHHHH----HTTCSEEEECSSCCCCCTTSCCTTHHHHHHTCEEECCCSCCCCHHHHHHHHHC
T ss_pred CCCcchHHHHH----hcCCcEEEECCCCccccCCccchHHHHHhCCEEEEcCCCCCCCHHHHHHHHHH
Confidence 99988888874 689999999999874 3556789999999999999999999999999999974
No 4
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.91 E-value=5.4e-24 Score=176.33 Aligned_cols=127 Identities=28% Similarity=0.481 Sum_probs=94.1
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCC-CCCCCHHHHHHHHHHccCccEEEEcCCCcccHHH
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKG-PPVTPLHERMIMVNAVKWVDEVISDAPYAITKDF 130 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg-~pi~s~eER~~ll~~~k~VD~Vv~~~py~~t~df 130 (307)
++++++|+||++|.||+.++++|++.+++++|++++|+.... ++ +|++|.+||++++++++++|.++++.+|. +|
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~~~~~v~v~~~~~~~~-~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~---~~ 77 (132)
T 2b7l_A 2 KRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQI-KHKKSYYDYEQRKMMLESIRYVDLVIPEKGWG---QK 77 (132)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEEECHHHHHH-TTCCCSSCHHHHHHHHHTBTTCCEEEEECCGG---GH
T ss_pred eEEEEeeecCcCCHHHHHHHHHHHHhCCcEEEEEECCHHHhc-cCCCCCCCHHHHHHHHHhcCCCCEEEECCChH---HH
Confidence 368999999999999999999999999999999999884322 33 68999999999999997799998855543 67
Q ss_pred HHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHhCCEEEEcCCCCCCCHHHHHHHHHhh
Q 021802 131 MKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYKQIKRTEGVSSTDIVGRMLLC 189 (307)
Q Consensus 131 le~ll~~l~~d~VV~GdD~~fg~~g~d~y~~lk~~g~v~vv~rt~~VSST~Ir~rIl~~ 189 (307)
++. +++++++++|+|+|+.. .++.++..+++.++++.+.||||.||++|.+.
T Consensus 78 ~~~-~~~~~~~~iv~G~D~~~------~~~~L~~~~~v~~i~~~~~iSST~IR~~i~~g 129 (132)
T 2b7l_A 78 EDD-VEKFDVDVFVMGHDWEG------EFDFLKDKCEVIYLKRTEGISTTKIKQELYGK 129 (132)
T ss_dssp HHH-HHHTTCCEEEECGGGTT------TTGGGTTTSEEEECSSCC--------------
T ss_pred HHH-HHHcCCCEEEECCCCcC------cHHHHHhCCEEEEECCCCCcCHHHHHHHHHhc
Confidence 765 57799999999999842 23456677899999999999999999998754
No 5
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.90 E-value=6.9e-24 Score=174.82 Aligned_cols=126 Identities=29% Similarity=0.493 Sum_probs=104.1
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCC-CCCCCHHHHHHHHHHccCccEEEEcCCCcccHHH
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKG-PPVTPLHERMIMVNAVKWVDEVISDAPYAITKDF 130 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg-~pi~s~eER~~ll~~~k~VD~Vv~~~py~~t~df 130 (307)
++++++|+|||+|.||+.++++|++.+|+++|++++|+... .|+ ++++|.+||++++++++++|.++...+|. +|
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~d~~~v~v~~~~~~~-~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~---~~ 77 (129)
T 1coz_A 2 KKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNL-QKQKKAYHSYEHRKLILETIRYVDEVIPEKNWE---QK 77 (129)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHHHHH-HHTCCCSSCHHHHHHHHTTBTTCCEEEEECCST---TH
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHh-cCCCCCCCCHHHHHHHHHhcCCCCEEEeCCCHH---HH
Confidence 36899999999999999999999999999999999987322 233 68999999999999998899998766654 56
Q ss_pred HHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHhCCEEEEcCCCCCCCHHHHHHHHHh
Q 021802 131 MKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAGRYKQIKRTEGVSSTDIVGRMLL 188 (307)
Q Consensus 131 le~ll~~l~~d~VV~GdD~~fg~~g~d~y~~lk~~g~v~vv~rt~~VSST~Ir~rIl~ 188 (307)
++. +++++++++++|+||. +.++.+++.+++.++++...||||.||+++.+
T Consensus 78 ~~~-l~~~~~~~iv~G~D~~------~~~~~L~~~~~v~~~~~~~~iSST~IR~~i~~ 128 (129)
T 1coz_A 78 KQD-IIDHNIDVFVMGDDWE------GKFDFLKDQCEVVYLPRTEGISTTKIKEEIAG 128 (129)
T ss_dssp HHH-HHHTTCSEEEEEGGGT------TTTGGGTTTSEEEEECCCTTCCHHHHHHTC--
T ss_pred HHH-HHHhCCcEEEECCCCC------CcHHHHHhCCeEEEcCCCCCcCHHHHHHHHHh
Confidence 655 4678999999999984 12345677789999999999999999998753
No 6
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.89 E-value=1e-23 Score=178.17 Aligned_cols=132 Identities=27% Similarity=0.363 Sum_probs=89.2
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCC-CCCCCHHHHHHHHHHccCccEEEEcCCCcccHH
Q 021802 51 PVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKG-PPVTPLHERMIMVNAVKWVDEVISDAPYAITKD 129 (307)
Q Consensus 51 ~~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg-~pi~s~eER~~ll~~~k~VD~Vv~~~py~~t~d 129 (307)
+++++++|+||++|.||+.+|++|++++++++|++++|+.... |+ ++++|.+||+++++++++||.+++..| ++
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~~~~~v~v~~~~~~~~-~~~~~l~~~~eR~~~l~~~~~vd~v~~~~~----~~ 76 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLGDELVVVVARDSTARN-NGKIPIFDENSRLALISELKVVDRAILGHE----GD 76 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTSSEEEEEECCHHHHHH-TTCCCSSCHHHHHHHHTTBTTCSEEEECCT----TC
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhCCCcEEEEECCcchhh-cCCCCCCCHHHHHHHHHhcCCCCEEEEcCc----hh
Confidence 3579999999999999999999999999999999999886554 43 789999999999999977999998544 34
Q ss_pred HHHHHHHhcCccEEEEcCCCCcCCCCCchHHHHH-hCCEEEEcCC----CCCCCHHHHHHHHHhhh
Q 021802 130 FMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAK-KAGRYKQIKR----TEGVSSTDIVGRMLLCV 190 (307)
Q Consensus 130 fle~ll~~l~~d~VV~GdD~~fg~~g~d~y~~lk-~~g~v~vv~r----t~~VSST~Ir~rIl~~~ 190 (307)
|++ +++++++++||+|+|++|+.. +..+..+ .+..+.+++. .+.||||.||++|....
T Consensus 77 f~~-~~~~l~~~~iv~G~d~~f~~~--~l~~~~~~~g~~v~vv~~~~~~~~~iSST~IR~~i~~~~ 139 (143)
T 3glv_A 77 MMK-TVIEVKPDIITLGYDQKFDEA--ELQSKINKLGITVKIVRISKYDGQLNSSSSVRKKIMELI 139 (143)
T ss_dssp HHH-HHHHHCCSEEEECTTCHHHHH--HHHHHHHHHTCCCEEEECCCCC-----------------
T ss_pred HHH-HHHhcCCCEEEECCCCCCCHH--HHHHHHHHcCCeEEEEEeeccCCCcCCHHHHHHHHHHHh
Confidence 765 567899999999999998421 1122222 2334444433 35799999999997654
No 7
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=99.87 E-value=5.2e-22 Score=187.92 Aligned_cols=136 Identities=19% Similarity=0.163 Sum_probs=110.3
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCe-----EEEEEeCChh-hhhc---CC-CCCCCHHHHHHHHHHccCccEEEE
Q 021802 51 PVRVYMDGCFDMMHYGHCNALRQARALGDQ-----LVVGVVSDAE-IIAN---KG-PPVTPLHERMIMVNAVKWVDEVIS 120 (307)
Q Consensus 51 ~~~V~~~G~FD~lH~GH~~lL~qAk~~gd~-----LiVgV~sD~~-i~~~---Kg-~pi~s~eER~~ll~~~k~VD~Vv~ 120 (307)
...|+++|+|||+|.||+++|++|++.+++ +++.+.++|. +... +. ++++|.+||.++++++ +||.+++
T Consensus 20 ~~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~l-GVD~v~~ 98 (308)
T 3op1_A 20 SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKRE-GVEELYL 98 (308)
T ss_dssp SCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHH-TCCEEEE
T ss_pred CCeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHc-CCCEEEE
Confidence 346999999999999999999999999854 3334444443 2221 22 5799999999999999 8999999
Q ss_pred cCCCcc------cHHHHHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHhCC--EEEEcCC----CCCCCHHHHHHHHHh
Q 021802 121 DAPYAI------TKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKKAG--RYKQIKR----TEGVSSTDIVGRMLL 188 (307)
Q Consensus 121 ~~py~~------t~dfle~ll~~l~~d~VV~GdD~~fg~~g~d~y~~lk~~g--~v~vv~r----t~~VSST~Ir~rIl~ 188 (307)
.||+- +++|+++++++++++.+|+|+||+||+ +.++.+.+++.+ ++.++++ .+.||||.||+.|..
T Consensus 99 -~~F~~~~a~ls~e~Fv~~ll~~l~~~~ivvG~DfrFG~-r~G~~~~L~~~~~~~V~~v~~~~~~~~~ISST~IR~~L~~ 176 (308)
T 3op1_A 99 -LDFSSQFASLTAQEFFATYIKAMNAKIIVAGFDYTFGS-DKKTAEDLKNYFDGEVIIVPPVEDEKGKISSTRIRQAILD 176 (308)
T ss_dssp -ECCCHHHHTCCHHHHHHHHHHHHTEEEEEEETTCCBTT-TTBCSTTHHHHCSSEEEEECCCBCSSCBCCHHHHHHHHHH
T ss_pred -ecCCHHHHcCCHHHHHHHHHHHcCCCEEEECcCCCCCC-cCCCHHHHHHhCCCCEEEeCCEecCCceEeHHHHHHHHHc
Confidence 89862 478998888899999999999999999 887777887765 4778877 357999999999975
Q ss_pred h
Q 021802 189 C 189 (307)
Q Consensus 189 ~ 189 (307)
+
T Consensus 177 G 177 (308)
T 3op1_A 177 G 177 (308)
T ss_dssp T
T ss_pred C
Confidence 4
No 8
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=99.84 E-value=5.2e-21 Score=183.20 Aligned_cols=136 Identities=15% Similarity=0.190 Sum_probs=108.7
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCe---EEEEEeCCh--h-hh-hcCC-CCCCCHHHHHHHHHHccCccEEEEcCC
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALGDQ---LVVGVVSDA--E-II-ANKG-PPVTPLHERMIMVNAVKWVDEVISDAP 123 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~gd~---LiVgV~sD~--~-i~-~~Kg-~pi~s~eER~~ll~~~k~VD~Vv~~~p 123 (307)
..|+++|+||++|.||+.+|++|++.+++ ..++++.|+ . +. ..+. +++++.+||+++++++ +||.+++ .|
T Consensus 16 ~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~-gVD~v~v-~~ 93 (338)
T 2x0k_A 16 NSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESF-GIDGVLV-ID 93 (338)
T ss_dssp CEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHT-TCSEEEE-EC
T ss_pred CeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhc-CCCEEEE-cc
Confidence 46999999999999999999999998754 345555554 2 22 1222 5699999999999998 8999998 78
Q ss_pred Cc-----c-cHHHHHH-HHHhcCccEEEEcCCCCcCCCCCchHHHHHhC----CEEEEcCC----CCCCCHHHHHHHHHh
Q 021802 124 YA-----I-TKDFMKK-LFDEYNIDYIIHGDDPCVLPDGTDAYELAKKA----GRYKQIKR----TEGVSSTDIVGRMLL 188 (307)
Q Consensus 124 y~-----~-t~dfle~-ll~~l~~d~VV~GdD~~fg~~g~d~y~~lk~~----g~v~vv~r----t~~VSST~Ir~rIl~ 188 (307)
|+ . .++|++. +.++++++++|+|+||+||.++.+..+.+++. .++.++++ ...||||.||+.|..
T Consensus 94 F~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~r~g~~~~L~~~~~~g~~V~~v~~~~~~~~~ISST~IR~~L~~ 173 (338)
T 2x0k_A 94 FTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQSRLTVDVIDLLDDEGVRISSTTVREFLSE 173 (338)
T ss_dssp TTTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGGGCEEHHHHHHHTTTTSEEEEECCCEETTEECSHHHHHHHHHT
T ss_pred ccHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCCCCCCCHHHHHHHhcCCeEEEEECcEecCCcccccchHHHHHhc
Confidence 74 2 3689987 55678999999999999999988777777653 47778887 357999999999875
Q ss_pred h
Q 021802 189 C 189 (307)
Q Consensus 189 ~ 189 (307)
.
T Consensus 174 G 174 (338)
T 2x0k_A 174 G 174 (338)
T ss_dssp T
T ss_pred C
Confidence 4
No 9
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=99.83 E-value=1.7e-20 Score=176.51 Aligned_cols=130 Identities=17% Similarity=0.220 Sum_probs=102.0
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCCe-----EEEEEeCChhhhhcC-CCCCCCHHHHHHHHHHccCccEEEEcCCC---
Q 021802 54 VYMDGCFDMMHYGHCNALRQARALGDQ-----LVVGVVSDAEIIANK-GPPVTPLHERMIMVNAVKWVDEVISDAPY--- 124 (307)
Q Consensus 54 V~~~G~FD~lH~GH~~lL~qAk~~gd~-----LiVgV~sD~~i~~~K-g~pi~s~eER~~ll~~~k~VD~Vv~~~py--- 124 (307)
|+++|+||++|.||+++|++|++.+++ +++.+.++|.+...+ .++++|.+||+++++++. .+++ .||
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~~lg---~~~v-~~F~~~ 77 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRYA---RTVV-LDFFRI 77 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTTS---CEEE-ECHHHH
T ss_pred EEEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCCCCCCCCCHHHHHHHHHhCC---CEEE-EEhHHh
Confidence 789999999999999999999998865 344444445333222 257999999999999984 3333 455
Q ss_pred --cccHHHHHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHh-CCEEEEcCCC----CCCCHHHHHHHHHhh
Q 021802 125 --AITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKK-AGRYKQIKRT----EGVSSTDIVGRMLLC 189 (307)
Q Consensus 125 --~~t~dfle~ll~~l~~d~VV~GdD~~fg~~g~d~y~~lk~-~g~v~vv~rt----~~VSST~Ir~rIl~~ 189 (307)
..+++|++.++ ++++++|+|+||+||+++.+.++.+++ ++++.+++.. ..||||.||+.|...
T Consensus 78 a~ls~~~Fi~~il--l~~~~iVvG~Df~fG~~~~g~~~~L~~~G~~V~~v~~~~~~~~~iSST~IR~~L~~G 147 (293)
T 1mrz_A 78 KDLTPEGFVERYL--SGVSAVVVGRDFRFGKNASGNASFLRKKGVEVYEIEDVVVQGKRVSSSLIRNLVQEG 147 (293)
T ss_dssp TTCCHHHHHHHHC--TTCCEEEEETTCCBSGGGCBCHHHHHHTTCEEEEECCCEETTEECCHHHHHHHHHTT
T ss_pred hcCCHHHHHHHHh--cCCCEEEECCCCCCCCCCCCCHHHHHhCCCEEEEECCEEeCCccccHhHHHHHHhcC
Confidence 23478988766 899999999999999988877777776 4688888863 579999999999765
No 10
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.77 E-value=8.7e-19 Score=155.05 Aligned_cols=129 Identities=23% Similarity=0.249 Sum_probs=94.9
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHH-ccCccEEEEcCCCc-ccH
Q 021802 51 PVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPYA-ITK 128 (307)
Q Consensus 51 ~~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~-~k~VD~Vv~~~py~-~t~ 128 (307)
.+++++.|+||++|.||+.++++|++++|+++++|.+++ .| +|+++.+||+++++. ++++|.+.+ .+|+ ++.
T Consensus 22 mki~v~~GsFDpiH~GHl~li~~A~~~~d~viv~v~~~p----~K-~~l~s~eeR~~ml~~~~~~v~~v~v-~~f~~~~~ 95 (187)
T 3k9w_A 22 MVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSR----AK-KPFFSLEERLKIANEVLGHYPNVKV-MGFTGLLK 95 (187)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECCG----GG-CCSSCHHHHHHHHHHHHTTCTTEEE-EEESSCHH
T ss_pred cEEEEEEEeCCcCcHHHHHHHHHHHHHCCcEEEEEecCC----cc-CCCCCHHHHHHHHHHHhccCCcEEE-EechhhHH
Confidence 467999999999999999999999999999999999875 34 589999999999999 689999987 5664 344
Q ss_pred HHHHHHHHhcCccEEEEc----CCCCcCCCCCchHHHHHhCCEEEEcCCC---CCCCHHHHHHHHHhh
Q 021802 129 DFMKKLFDEYNIDYIIHG----DDPCVLPDGTDAYELAKKAGRYKQIKRT---EGVSSTDIVGRMLLC 189 (307)
Q Consensus 129 dfle~ll~~l~~d~VV~G----dD~~fg~~g~d~y~~lk~~g~v~vv~rt---~~VSST~Ir~rIl~~ 189 (307)
+++ ++++++++|+| .||.+...-....+.+....+...+.+. ..||||.||+++...
T Consensus 96 d~l----~~l~~~~iv~G~r~~~Df~~E~~la~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g 159 (187)
T 3k9w_A 96 DFV----RANDARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLG 159 (187)
T ss_dssp HHH----HHTTCSEEEEECCTTSCHHHHHHHHHHHHHHCTTCEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred HHH----HHcCCCEEEECCCcccccchHHHHHHHHHHhCCCCcEEEEecccccccccHHHHHHHHHcC
Confidence 444 56899999999 5554311000000111112344445444 479999999998754
No 11
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.75 E-value=3e-18 Score=145.02 Aligned_cols=128 Identities=14% Similarity=0.176 Sum_probs=93.9
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHH-ccCccEEEEcCCCc-ccHH
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPYA-ITKD 129 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~-~k~VD~Vv~~~py~-~t~d 129 (307)
+++++.|+|||+|.||+.++++|++.+|+++++++.+| .| +++++.+||++|++. ++++|.+.+ .+|+ ++.+
T Consensus 2 ~i~i~~GsFDpvH~GH~~l~~~a~~~~d~v~v~~~~~p----~k-~~~~~~~~R~~ml~~a~~~~~~v~v-~~~~~~~~~ 75 (158)
T 1qjc_A 2 KRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASP----SK-KPMFTLEERVALAQQATAHLGNVEV-VGFSDLMAN 75 (158)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEESCC----SS-CCSSCHHHHHHHHHHHTTTCTTEEE-EEECSCHHH
T ss_pred CEEEEEecCCCCCHHHHHHHHHHHHhCCEEEEEECCCC----CC-CCCCCHHHHHHHHHHHHhcCCCeEE-cccchHHHH
Confidence 36899999999999999999999999999999888875 34 478999999999996 779998877 4553 2333
Q ss_pred HHHHHHHhcCccEEEEcCCCCcCCCCCchHHHH-HhC---C-EEEEcCCC--CCCCHHHHHHHHHhh
Q 021802 130 FMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELA-KKA---G-RYKQIKRT--EGVSSTDIVGRMLLC 189 (307)
Q Consensus 130 fle~ll~~l~~d~VV~GdD~~fg~~g~d~y~~l-k~~---g-~v~vv~rt--~~VSST~Ir~rIl~~ 189 (307)
.+++++++++++|.|..++.......... +.. . .+..++.. ..||||.||+++...
T Consensus 76 ----~l~~l~~~~~v~G~d~~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~i~~g 138 (158)
T 1qjc_A 76 ----FARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQ 138 (158)
T ss_dssp ----HHHHTTCCEEEEECCTTCCHHHHHHHHHHHHHHCTTSEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred ----HHHHcCCCEEEEeccchhhhHHHHHHHHhCccCCCCCCEEEEECCCCCCccCHHHHHHHHHcC
Confidence 34668999999999977643221111111 221 1 33344333 469999999999755
No 12
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.74 E-value=6.2e-18 Score=145.31 Aligned_cols=129 Identities=15% Similarity=0.135 Sum_probs=93.7
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHH-ccCccEEEEcCCCcccHHH
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPYAITKDF 130 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~-~k~VD~Vv~~~py~~t~df 130 (307)
++++++|+|||+|.||+.++++|++.+|+++|.+..+| .| ++++|.+||++|++. ++++|.+.+ .+|+ +|
T Consensus 3 ~i~i~~GsFDpvH~GH~~li~~a~~~~d~v~v~~~~~p----~k-~~l~~~~~R~~ml~~a~~~~~~v~v-~~~e---~~ 73 (169)
T 1o6b_A 3 SIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNS----SK-KPLFSVEERCELLREVTKDIPNITV-ETSQ---GL 73 (169)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCC----SS-CCSSCHHHHHHHHHHHHTTCTTEEE-EECS---SC
T ss_pred cEEEEEEeeCCCCHHHHHHHHHHHHhCCEEEEEECCCC----cc-CCCCCHHHHHHHHHHHHhcCCCEEE-cccc---hH
Confidence 36899999999999999999999999999888777554 34 578999999999996 578998877 5654 23
Q ss_pred HHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHh----CCEEEE-cCC--CCCCCHHHHHHHHHhh
Q 021802 131 MKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKK----AGRYKQ-IKR--TEGVSSTDIVGRMLLC 189 (307)
Q Consensus 131 le~ll~~l~~d~VV~GdD~~fg~~g~d~y~~lk~----~g~v~v-v~r--t~~VSST~Ir~rIl~~ 189 (307)
..+.+++++++++++|.|+.++.+.........+ ...... ++. ...||||.||+++...
T Consensus 74 ~~~~l~~l~~~~~i~G~d~~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (169)
T 1o6b_A 74 LIDYARRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMANNQYSFLSSSIVKEVARYD 139 (169)
T ss_dssp HHHHHHHTTCSEEEEEECSGGGHHHHHHHHHHHHHHCTTSEEEEEECCSTTTTCCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEcCccccchHHHHHHHHHhccccCCCCEEEEECCCCCCcCcHHHHHHHHHcC
Confidence 3333467889999999998876432221211121 223333 332 2369999999999865
No 13
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.72 E-value=1.5e-18 Score=149.58 Aligned_cols=125 Identities=20% Similarity=0.206 Sum_probs=92.1
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHH-ccCccEEEEcCCCc-ccHH
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPYA-ITKD 129 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~-~k~VD~Vv~~~py~-~t~d 129 (307)
+++++.|+||++|.||+.++++|++++|+|+|++.+++ .| +|+++.+||+++++. ++++|.+.+ .+|+ .+.+
T Consensus 3 ~i~i~~GsFDPiH~GHl~ii~~A~~~~D~viv~v~~~~----~K-~~~~~~~eR~~ml~~a~~~~~~v~v-~~~~~l~~~ 76 (157)
T 3nv7_A 3 KVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSS----AK-NPMFSLDERLKMIQLATKSFKNVEC-VAFEGLLAY 76 (157)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEECCG----GG-CCSSCHHHHHHHHHHHHTTSTTEEE-EEECSCHHH
T ss_pred EEEEEEEEcCCCCHHHHHHHHHHHHhCCceEEEEccCC----CC-CCCCCHHHHHHHHHHHhcCCCcEEE-EecCchHHH
Confidence 46999999999999999999999999999999998886 34 589999999999998 778898866 4553 3345
Q ss_pred HHHHHHHhcCccEEEEc----CCCCcCCCCCchHHHHHhC---CEEEEcCCCC---CCCHHHHHHHHHhh
Q 021802 130 FMKKLFDEYNIDYIIHG----DDPCVLPDGTDAYELAKKA---GRYKQIKRTE---GVSSTDIVGRMLLC 189 (307)
Q Consensus 130 fle~ll~~l~~d~VV~G----dD~~fg~~g~d~y~~lk~~---g~v~vv~rt~---~VSST~Ir~rIl~~ 189 (307)
++ ++++++++|.| .||.+.. +....-+.. .+...+.+++ .+|||.||+.+...
T Consensus 77 ~~----~~~~~~~ivrG~r~~~D~~ye~---~~a~~n~~l~~~ietv~l~~~~~~~~iSSt~vRe~~~~g 139 (157)
T 3nv7_A 77 LA----KEYHCKVLVRGLRVVSDFEYEL---QMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHK 139 (157)
T ss_dssp HH----HHTTCCCBCCCCSCCCCHHHHH---HHHHHHHHSSCCCCCCCCCCCHHHHTCCHHHHHHHHHTT
T ss_pred HH----HHcCCCEEEECCcccchhhhhH---HHHHHHHHhCCCceEEEEcCCcccceeeHHHHHHHHHcC
Confidence 54 56899999999 5544210 100011122 2333344543 79999999988644
No 14
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.72 E-value=1.9e-17 Score=144.12 Aligned_cols=133 Identities=20% Similarity=0.113 Sum_probs=100.2
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEeCChhhhhcCC-CCCCCHHHHHHHHHH-ccCccEEEEcCCCc--
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALG--DQLVVGVVSDAEIIANKG-PPVTPLHERMIMVNA-VKWVDEVISDAPYA-- 125 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~g--d~LiVgV~sD~~i~~~Kg-~pi~s~eER~~ll~~-~k~VD~Vv~~~py~-- 125 (307)
+++++.|+|||+|.||+.++++|++.+ |++++.+++++. .|. +++++.+||++|++. ++++|.+.+ .+|+
T Consensus 3 ~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~~~~~~~~v~v-~~~e~~ 78 (189)
T 2qtr_A 3 KIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPP---HKQGRNITSVESRLQMLELATEAEEHFSI-CLEELS 78 (189)
T ss_dssp EEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCT---TCTTSCCCCHHHHHHHHHHHHTTCTTEEE-CCTGGG
T ss_pred eEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CccCCCCCCHHHHHHHHHHHhCCCCCEEE-ehHHhc
Confidence 468999999999999999999999998 899999987763 343 579999999999996 789998888 6664
Q ss_pred -----ccHHHHHHHHHhcCcc---EEEEcCCCCcCCCCCchHHHHHhCCEEEEcCCC-----------------CCCCHH
Q 021802 126 -----ITKDFMKKLFDEYNID---YIIHGDDPCVLPDGTDAYELAKKAGRYKQIKRT-----------------EGVSST 180 (307)
Q Consensus 126 -----~t~dfle~ll~~l~~d---~VV~GdD~~fg~~g~d~y~~lk~~g~v~vv~rt-----------------~~VSST 180 (307)
++.++++.+-.++ ++ ++|+|.|+.++..+-..++.+.+.+.+.+++|. ..||||
T Consensus 79 ~~~~~~~~~~l~~l~~~~-p~~~~~~v~G~D~~~~~~~w~~~~~l~~~~~~~v~~r~~~~~~~~~~v~~~~~~~~~iSST 157 (189)
T 2qtr_A 79 RKGPSYTYDTMLQLTKKY-PDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSS 157 (189)
T ss_dssp SCSCCCHHHHHHHHHHHC-TTCEEEEEEEHHHHHHGGGSTTHHHHTTTCEEEEECCTTCCCCCSSCCEEECCCCCCCCHH
T ss_pred CCCCCCHHHHHHHHHHHC-CCCCEEEEEehhhhhhhhccCCHHHHHHhCCEEEEECCCCCccCCceEEEEcCCCCccCHH
Confidence 3445554443333 33 399999988765544456667666666666542 369999
Q ss_pred HHHHHHHhh
Q 021802 181 DIVGRMLLC 189 (307)
Q Consensus 181 ~Ir~rIl~~ 189 (307)
.||+++...
T Consensus 158 ~IR~~l~~g 166 (189)
T 2qtr_A 158 LLRERYKEK 166 (189)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999754
No 15
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.70 E-value=2e-17 Score=143.05 Aligned_cols=128 Identities=20% Similarity=0.184 Sum_probs=86.6
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHHccCccEEEEcCCCc-ccHHH
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVKWVDEVISDAPYA-ITKDF 130 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~~k~VD~Vv~~~py~-~t~df 130 (307)
+++++.|+||++|.||+.++++|++++|+++|++..++ .| +|+++.+||+++++.+...|.+.+ .+|+ .+.++
T Consensus 6 ~i~i~~GsFDPiH~GHl~li~~A~~~~d~viv~v~~~~----~K-~~~~~~~~R~~m~~~~~~~~~v~V-~~~~~l~~~~ 79 (162)
T 4f3r_A 6 PIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAPTS----RK-DPHLKLEERVNLIADVLTDERVEV-LPLTGLLVDF 79 (162)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHGGGCSEEEEEECCC-----------CCHHHHHHHHHHHCCCTTEEE-EECCSCHHHH
T ss_pred EEEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEEecCC----cc-CCCCCHHHHHHHHHHhhCCCCEEE-EeccchHHHH
Confidence 46999999999999999999999999999999999876 34 689999999999998544477755 3443 34555
Q ss_pred HHHHHHhcCccEEEEcC----CCCcCCCCCchHHHHHhCCEEEEcCCC---CCCCHHHHHHHHHhh
Q 021802 131 MKKLFDEYNIDYIIHGD----DPCVLPDGTDAYELAKKAGRYKQIKRT---EGVSSTDIVGRMLLC 189 (307)
Q Consensus 131 le~ll~~l~~d~VV~Gd----D~~fg~~g~d~y~~lk~~g~v~vv~rt---~~VSST~Ir~rIl~~ 189 (307)
+ ++++++++|.|- ||....+-....+.+....+...+.+. ..||||.||+++...
T Consensus 80 ~----~~~~~~~~v~G~r~~~Df~~e~~~a~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g 141 (162)
T 4f3r_A 80 A----KTHQANFILRGLRAVSDFDYEFQLAHMNYQLSPEIETIFLPAREGYSYVSGTMVREIVTLG 141 (162)
T ss_dssp H----HHTTCCEEEEEECSHHHHHHHHHHHHHHHHHCTTCEEEEEECCGGGSSCCHHHHHHHHHTT
T ss_pred H----HHcCCCEEEECCCchhhhhhHHHHHHHHHHhCCCccEEEEECCcccccccHHHHHHHHHcC
Confidence 5 568999999994 432100000000011112344444444 379999999998754
No 16
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.69 E-value=5.8e-16 Score=136.08 Aligned_cols=132 Identities=20% Similarity=0.117 Sum_probs=93.7
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEeCChhhhhcCC-CCCCCHHHHHHHHHH-ccCccEEEEcCCCc--
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALG--DQLVVGVVSDAEIIANKG-PPVTPLHERMIMVNA-VKWVDEVISDAPYA-- 125 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~g--d~LiVgV~sD~~i~~~Kg-~pi~s~eER~~ll~~-~k~VD~Vv~~~py~-- 125 (307)
+++++.|+|||+|.||+.++++|++.+ |++++.+++++. .|. +++++.+||++|++. ++++|.+.+ .+|.
T Consensus 8 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~ 83 (194)
T 1kam_A 8 KIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPP---HKQNEDYTDSFHRVEMLKLAIQSNPSFKL-ELVEME 83 (194)
T ss_dssp EEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC------------CHHHHHHHHHHHHTTCTTEEE-CCGGGS
T ss_pred EEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCC---CcCCcCCCCHHHHHHHHHHHHcCCCCeEE-eHHHhc
Confidence 468999999999999999999999998 889888887652 343 578999999999995 889998877 5553
Q ss_pred -----ccHHHHHHHHHhcCcc---EEEEcCCCCcC-CCCCchHHHHHhCCEEEEcCCC-----------------CCCCH
Q 021802 126 -----ITKDFMKKLFDEYNID---YIIHGDDPCVL-PDGTDAYELAKKAGRYKQIKRT-----------------EGVSS 179 (307)
Q Consensus 126 -----~t~dfle~ll~~l~~d---~VV~GdD~~fg-~~g~d~y~~lk~~g~v~vv~rt-----------------~~VSS 179 (307)
++.++++.+..++ ++ ++|+|.|..++ ..|. .|+.+.+...+.+++|. ..|||
T Consensus 84 ~~~~~~t~~~l~~l~~~~-p~~~~~~v~G~D~~~~~~~W~-~~e~i~~~~~~~v~~R~g~~~~l~~~i~~~~~~~~~ISS 161 (194)
T 1kam_A 84 REGPSYTFDTVSLLKQRY-PNDQLFFIIGADMIEYLPKWY-KLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSS 161 (194)
T ss_dssp TTCCCSHHHHHHHHHHHS-TTSEEEEEEETTTTTTCCCCH-HHHHHHHHSEEEEEECSSCCCCCSSCCEEEECCCBCCCH
T ss_pred CCCCCChHHHHHHHHHHC-CCCcEEEEEecchhhhhcccc-CHHHHHHhCcEEEEECCCcchhcCCCEEEeCCCCCCcCH
Confidence 4556666654455 44 99999998765 3344 34433334445544442 26999
Q ss_pred HHHHHHHHhh
Q 021802 180 TDIVGRMLLC 189 (307)
Q Consensus 180 T~Ir~rIl~~ 189 (307)
|.||+++...
T Consensus 162 T~IR~~i~~g 171 (194)
T 1kam_A 162 TMIRERFKSK 171 (194)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 9999999755
No 17
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.67 E-value=5.7e-16 Score=131.39 Aligned_cols=122 Identities=20% Similarity=0.281 Sum_probs=87.8
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCC-CCCCCHHHHHHHHHH-ccCccEEEEcCCCcccHHHH
Q 021802 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKG-PPVTPLHERMIMVNA-VKWVDEVISDAPYAITKDFM 131 (307)
Q Consensus 54 V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg-~pi~s~eER~~ll~~-~k~VD~Vv~~~py~~t~dfl 131 (307)
+++.|+|||+|.||+.++++|++.+|+++++++.++ .|. +++++.++|++|++. ++++|.+.+ .+|+ +|.
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~d~v~v~~~~~p----~k~~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e---~~~ 74 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLENP----SKRGQYLFSAEERLAIIREATAHLANVEA-ATFS---GLL 74 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECC---------CCSSCHHHHHHHHHHHTTTCTTEEE-EEEC---SCH
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CCCCCCCCCHHHHHHHHHHHhcCCCCEEE-EecC---chH
Confidence 899999999999999999999999999988888665 243 478999999999996 678898877 5554 133
Q ss_pred HHHHHhcCccEEEEcCCCCcCCCCCchHHHHH-------hC---C-EEEEcCCC--CCCCHHHHHHHHHhh
Q 021802 132 KKLFDEYNIDYIIHGDDPCVLPDGTDAYELAK-------KA---G-RYKQIKRT--EGVSSTDIVGRMLLC 189 (307)
Q Consensus 132 e~ll~~l~~d~VV~GdD~~fg~~g~d~y~~lk-------~~---g-~v~vv~rt--~~VSST~Ir~rIl~~ 189 (307)
.+.+++++++++++|.|.. .+ ++.++ .. . .+..++.. ..||||.||+++...
T Consensus 75 ~~~l~~l~~~~~v~G~d~~-----~~-~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (160)
T 1od6_A 75 VDFVRRVGAQAIVKGLRAV-----SD-YEYELQMAHLNRQLYPGLETLFILAATRYSFVSSTMVKEIARYG 139 (160)
T ss_dssp HHHHHHTTCSEEEEEECTT-----SC-HHHHHHHHHHHHHHTTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEEeCCcc-----cc-hHHHHHHHHhCcCCCCCCCEEEEeCCCCCCcccHHHHHHHHHcC
Confidence 3345678999999998732 21 11111 11 1 23334322 479999999999765
No 18
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.65 E-value=2.9e-16 Score=136.63 Aligned_cols=124 Identities=23% Similarity=0.287 Sum_probs=87.0
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHH-ccCccEEEEcCCCc-ccHH
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPYA-ITKD 129 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~-~k~VD~Vv~~~py~-~t~d 129 (307)
+++++.|+||++|.||+.++++|++.+|+++|++..++ .| +++++.+||++|++. +++.+.+.+ .+|. ++.+
T Consensus 4 ki~i~~GsFDPiH~GHl~i~~~a~~~~d~viv~v~~~p----~K-~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~tvd 77 (168)
T 3f3m_A 4 TIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNS----KK-EGTFSLEERMDLIEQSVKHLPNVKV-HQFSGLLVD 77 (168)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHGGGSSEEEEEECC----------CCSCHHHHHHHHHHHTTTCTTEEE-EECCSCHHH
T ss_pred eEEEEEEEcCcCCHHHHHHHHHHHHhCCEEEEEEcCCC----CC-CCCCCHHHHHHhHHHHhcCCCCEEE-EEcCCCHHH
Confidence 46999999999999999999999999999999998765 34 589999999999997 567787765 4443 4556
Q ss_pred HHHHHHHhcCccEEEEcCCCCcCCCCCchHHH--H---Hh---CC-EEEEcCC--CCCCCHHHHHHHHHhh
Q 021802 130 FMKKLFDEYNIDYIIHGDDPCVLPDGTDAYEL--A---KK---AG-RYKQIKR--TEGVSSTDIVGRMLLC 189 (307)
Q Consensus 130 fle~ll~~l~~d~VV~GdD~~fg~~g~d~y~~--l---k~---~g-~v~vv~r--t~~VSST~Ir~rIl~~ 189 (307)
++ +++++++++.|-|-..+ + .|+. . +. .. .+...+. ...||||.||+++...
T Consensus 78 ~~----~~l~~~~~I~G~d~~~d--~--~~e~~~a~~~r~l~~~~e~v~l~~~p~~~~ISST~IRe~~~~g 140 (168)
T 3f3m_A 78 YC----EQVGAKTIIRGLRAVSD--F--EYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYR 140 (168)
T ss_dssp HH----HHHTCCEEEEEECTTCC--H--HHHHHHHHHHHHHCTTSEEEEEECCTTTTTCCHHHHHHHHHTT
T ss_pred HH----HHcCCCEEEEcCCchhh--h--hHHHHHhHHhHhhCCCCcEEEEeCCcccccccHHHHHHHHHcC
Confidence 65 45789999999653322 1 1211 0 11 12 2333322 2349999999998754
No 19
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.63 E-value=9.7e-16 Score=136.64 Aligned_cols=92 Identities=21% Similarity=0.236 Sum_probs=77.0
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEeCChhhhhcCCCCCCCHHHHHHHHH-HccCccEEEEcCCCc-----
Q 021802 54 VYMDGCFDMMHYGHCNALRQARALG--DQLVVGVVSDAEIIANKGPPVTPLHERMIMVN-AVKWVDEVISDAPYA----- 125 (307)
Q Consensus 54 V~~~G~FD~lH~GH~~lL~qAk~~g--d~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~-~~k~VD~Vv~~~py~----- 125 (307)
+++.|+|||+|.||+.++++|++.+ |++++.+++++. .|..++++.+||++|++ +++++|.+.+ .+|+
T Consensus 6 ~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~~~~ 81 (213)
T 1k4m_A 6 ALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP---HRPQPEANSVQRKHMLELAIADKPLFTL-DERELKRNA 81 (213)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCT---TSCCCSSCHHHHHHHHHHHHTTCTTEEE-CCHHHHCSS
T ss_pred EEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCCCCCCCHHHHHHHHHHHhccCCCEEE-eHHHhcCCC
Confidence 8999999999999999999999987 889888887752 34346899999999999 5789998887 5553
Q ss_pred --ccHHHHHHHHHhcCcc---EEEEcCCC
Q 021802 126 --ITKDFMKKLFDEYNID---YIIHGDDP 149 (307)
Q Consensus 126 --~t~dfle~ll~~l~~d---~VV~GdD~ 149 (307)
.+.+|++.+.++++++ ++++|.|.
T Consensus 82 ~s~t~~~l~~l~~~~~~~~~~~~i~G~D~ 110 (213)
T 1k4m_A 82 PSYTAQTLKEWRQEQGPDVPLAFIIGQDS 110 (213)
T ss_dssp CCCHHHHHHHHHHHHCTTSCEEEEEEHHH
T ss_pred CCcHHHHHHHHHHHhCCCCcEEEEEehhh
Confidence 4578988876777899 99999975
No 20
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.62 E-value=1.1e-15 Score=134.04 Aligned_cols=131 Identities=18% Similarity=0.163 Sum_probs=92.5
Q ss_pred CCCCeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHH-ccCccEEEEcCCCc-
Q 021802 48 KKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPYA- 125 (307)
Q Consensus 48 ~~~~~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~-~k~VD~Vv~~~py~- 125 (307)
..+.+++++.|+||++|.||+.++++|++++|+|+|++..++ .| +++++.+||++|++. ++..+.+.+ .+|+
T Consensus 18 ~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~D~Viv~v~~np----~K-~~~~s~eeR~~mv~~a~~~~~~v~V-~~~e~ 91 (177)
T 3nbk_A 18 GSHMTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNP----AK-TGMFDLDERIAMVKESTTHLPNLRV-QVGHG 91 (177)
T ss_dssp --CCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCT----TS-CCSSCHHHHHHHHHHHCTTCTTEEE-EECCS
T ss_pred CCCCEEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CC-CCCCCHHHHHHHHHHHhCCCCCEEE-EecCc
Confidence 445567999999999999999999999999999999998775 45 489999999999997 777787766 3443
Q ss_pred ccHHHHHHHHHhcCccEEEEcCCCCcCCCCC-c---hHHHHHhCCEEEEcCC---CCCCCHHHHHHHHHhh
Q 021802 126 ITKDFMKKLFDEYNIDYIIHGDDPCVLPDGT-D---AYELAKKAGRYKQIKR---TEGVSSTDIVGRMLLC 189 (307)
Q Consensus 126 ~t~dfle~ll~~l~~d~VV~GdD~~fg~~g~-d---~y~~lk~~g~v~vv~r---t~~VSST~Ir~rIl~~ 189 (307)
.+.+|+ +++++++++.|-+...+-+.+ + ..+.+ ...+...+.. ...||||.||+++...
T Consensus 92 l~vd~~----~~~~a~~ivrGlr~~~Dfeye~~~a~~nr~l-~~ietvfl~~~~~~~~ISST~IRe~~~~g 157 (177)
T 3nbk_A 92 LVVDFV----RSCGMTAIVKGLRTGTDFEYELQMAQMNKHI-AGVDTFFVATAPRYSFVSSSLAKEVAMLG 157 (177)
T ss_dssp CHHHHH----HHTTCCEEEEEECTTCCHHHHHHHHHHHHHH-HCCEEEEEECCGGGSSCCHHHHHHHHHTT
T ss_pred hHHHHH----HHcCCCEEEECCCchhHHHHHHHHHHHHHhc-CCCceEEEeCCCcccccchHHHHHHHHcC
Confidence 456666 458999999994432110000 0 00112 3334333332 3479999999987643
No 21
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.60 E-value=9.8e-16 Score=133.60 Aligned_cols=125 Identities=18% Similarity=0.208 Sum_probs=85.6
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHH-ccCccEEEEcCCC-cccHH
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPY-AITKD 129 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~-~k~VD~Vv~~~py-~~t~d 129 (307)
+++++.|+||++|.||+.++++|++.+|+|+|++..++ .| +|+++.+||++|++. ++.++.+.+..+| ..+.+
T Consensus 3 ~i~i~~GsFDPiH~GHl~i~~~a~~~~D~viv~v~~~~----~K-~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~~tvd 77 (171)
T 3nd5_A 3 KIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINT----SK-QTLFTPEEKKYLIEEATKEMPNVRVIMQETQLTVE 77 (171)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEEC-----------CCCHHHHHHHHHHHHTTCTTEEEEEECSSCHHH
T ss_pred eEEEEEEEccccCHHHHHHHHHHHHHCCCeEEEEecCC----CC-CCCCCHHHHHHHHHHHHccCCCEEEeeCCCCcHHH
Confidence 46899999999999999999999999999999997765 34 489999999999996 6888887541123 34566
Q ss_pred HHHHHHHhcCccEEEEcCCCCcCCCCCchHHH----H-Hh---CC-EEEEcCC--CCCCCHHHHHHHHHhh
Q 021802 130 FMKKLFDEYNIDYIIHGDDPCVLPDGTDAYEL----A-KK---AG-RYKQIKR--TEGVSSTDIVGRMLLC 189 (307)
Q Consensus 130 fle~ll~~l~~d~VV~GdD~~fg~~g~d~y~~----l-k~---~g-~v~vv~r--t~~VSST~Ir~rIl~~ 189 (307)
++ +++++++++.|.|-..+ .+ |+. + +. .. .+...+. ...||||.||+++...
T Consensus 78 ~~----~~l~~~~~i~G~~~~~d--~~--~e~~la~~nr~l~~~~etv~l~~~~~~~~ISST~IRe~~~~g 140 (171)
T 3nd5_A 78 SA----KSLGANFLIRGIRNVKD--YE--YEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFG 140 (171)
T ss_dssp HH----HHHTCCEEEEEECSHHH--HH--HHHHHHHHHHHHCTTSEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HH----HHCCCCEEEECCCchhh--hH--HHHHHHHHhhhhcCCccEEEEeCCccccccchHHHHHHHHcC
Confidence 66 45689999999553211 11 111 0 11 12 3333332 2479999999998754
No 22
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.59 E-value=3.1e-15 Score=130.02 Aligned_cols=123 Identities=23% Similarity=0.235 Sum_probs=88.2
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHH-HccCccEEEEcCCCc-ccHH
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVN-AVKWVDEVISDAPYA-ITKD 129 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~-~~k~VD~Vv~~~py~-~t~d 129 (307)
.++++.|+||++|.||+.++++|++.+|+|+|++.+++ .| ++++|.+||++|++ ++++++.+.+ .+|. .+.+
T Consensus 13 ~i~i~~GsFdP~H~GHl~l~~~A~~~~D~viv~v~~~~----~k-k~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~tvd 86 (173)
T 1vlh_A 13 MKAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENP----RK-KCMFTLEERKKLIEEVLSDLDGVKV-DVHHGLLVD 86 (173)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCT----TC-CCSSCHHHHHHHHHHHTTTCTTEEE-EEECSCHHH
T ss_pred eEEEEEEEECcCcHHHHHHHHHHHHHCCEEEEEEeCCC----CC-CCCCCHHHHHHHHHHHhcCCCCEEE-ecCcchHHH
Confidence 35999999999999999999999999999999999975 33 48899999999999 6888888766 3443 3455
Q ss_pred HHHHHHHhcCccEEEEcCCCCcCCCCCchHHHH------Hh---CCE-EEEcCC--CCCCCHHHHHHHHHhh
Q 021802 130 FMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELA------KK---AGR-YKQIKR--TEGVSSTDIVGRMLLC 189 (307)
Q Consensus 130 fle~ll~~l~~d~VV~GdD~~fg~~g~d~y~~l------k~---~g~-v~vv~r--t~~VSST~Ir~rIl~~ 189 (307)
++ +++++++++.|-. .|.|-.... +. ... +..+.. ...||||.||+++...
T Consensus 87 ~l----~~l~~~~~i~gl~-----~w~d~~~~~~~~~~~r~~~~~~~~i~l~~~~~~~~iSST~IR~~i~~g 149 (173)
T 1vlh_A 87 YL----KKHGIKVLVRGLR-----AVTDYEYELQMALANKKLYSDLETVFLIASEKFSFISSSLVKEVALYG 149 (173)
T ss_dssp HH----HHHTCCEEEEEEC-----TTSCHHHHHHHHHHHHHHSTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HH----HHhCCCeEEeCCC-----cccchhhccchhhcCCCCCCCCcEEEEeCCCCCCceeHHHHHHHHHcC
Confidence 55 4578999998832 222210111 11 122 222222 2469999999999754
No 23
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.56 E-value=1.2e-14 Score=132.78 Aligned_cols=94 Identities=22% Similarity=0.296 Sum_probs=76.8
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHH-ccCccEEEEcCCCc--
Q 021802 51 PVRVYMDGCFDMMHYGHCNALRQARALG--DQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISDAPYA-- 125 (307)
Q Consensus 51 ~~~V~~~G~FD~lH~GH~~lL~qAk~~g--d~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~-~k~VD~Vv~~~py~-- 125 (307)
.+++++.|+||++|.||+.++++|++.+ |++++++..++. .|..++++.++|++|++. +++++.+.+ .+|.
T Consensus 23 ~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p---~K~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~ 98 (242)
T 1yum_A 23 KRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPP---HRETPQVSAAQRLAMVERAVAGVERLTV-DPRELQ 98 (242)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCG---GGSCTTCCHHHHHHHHHHHHTTCTTEEE-CCGGGG
T ss_pred ceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCC---CCCCCCCCHHHHHHHHHHHhcCCCeEEE-eeeeec
Confidence 3468999999999999999999999987 999999988752 344578999999999995 789998877 5553
Q ss_pred -----ccHHHHHHHHHhcCcc---EEEEcCC
Q 021802 126 -----ITKDFMKKLFDEYNID---YIIHGDD 148 (307)
Q Consensus 126 -----~t~dfle~ll~~l~~d---~VV~GdD 148 (307)
.+.++++.+-.+++++ ++++|.|
T Consensus 99 ~~~~sytvdtl~~l~~~~~p~~~~~fI~G~D 129 (242)
T 1yum_A 99 RDKPSYTIDTLESVRAELAADDQLFMLIGWD 129 (242)
T ss_dssp SSSSCCHHHHHHHHHHHSCTTCEEEEEEEHH
T ss_pred CCCCCCHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 5678887765667677 8889986
No 24
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.51 E-value=3.8e-14 Score=123.94 Aligned_cols=132 Identities=19% Similarity=0.131 Sum_probs=94.0
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEeCChhhhhcCC-CCCCCHHHHHHHHHH-ccCccEEEEcCCC---
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALG--DQLVVGVVSDAEIIANKG-PPVTPLHERMIMVNA-VKWVDEVISDAPY--- 124 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~g--d~LiVgV~sD~~i~~~Kg-~pi~s~eER~~ll~~-~k~VD~Vv~~~py--- 124 (307)
+++++.|+|||+|.||+.++++|++.+ |++++.+++++. .|+ +++++.++|++|++. ++..+.+.+ .+|
T Consensus 3 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~m~~~a~~~~~~v~v-~~~e~~ 78 (189)
T 2h29_A 3 KIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSP---LKKHHDFIDVQHRLTMIQMIIDELGFGDI-CDDEIK 78 (189)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCT---TSCCCSSCCCHHHHHHHHHHHHHHTCCEE-CCHHHH
T ss_pred eEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCcCCCCCCHHHHHHHHHHHHcCCCCEEE-ehHHhc
Confidence 358999999999999999999999986 888877777653 343 578999999999995 666666655 332
Q ss_pred ----cccHHHHHHHHHhcCcc---EEEEcCCCC-cCCCCCchHHHHHhCCEEEEcCCC-----------------CCCCH
Q 021802 125 ----AITKDFMKKLFDEYNID---YIIHGDDPC-VLPDGTDAYELAKKAGRYKQIKRT-----------------EGVSS 179 (307)
Q Consensus 125 ----~~t~dfle~ll~~l~~d---~VV~GdD~~-fg~~g~d~y~~lk~~g~v~vv~rt-----------------~~VSS 179 (307)
+++.++++.+.+.+ ++ ++++|.|.. -...|.+. +.+-....+.+++|. ..|||
T Consensus 79 ~~~~syt~dtl~~l~~~~-p~~~~~~i~G~D~~~~~~~W~~~-~~i~~~~~~~v~~R~~~~~~~~~~i~~~~~~~~~ISS 156 (189)
T 2h29_A 79 RGGQSYTYDTIKAFKEQH-KDSELYFVIGTDQYNQLEKWYQI-EYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISS 156 (189)
T ss_dssp HCSBCCHHHHHHHHHHHS-TTEEEEEEEEHHHHTTGGGSTTH-HHHHHHCEEEEECCSSSCCCCCTTSEEECCCCBCCCH
T ss_pred CCCCCCHHHHHHHHHHHC-CCCcEEEEEecchhhhhccccCH-HHHHhhCcEEEEECCCCccccCCcEEEEcCCCCccCH
Confidence 24667777665545 55 899998842 12345543 333334566666653 36999
Q ss_pred HHHHHHHHhh
Q 021802 180 TDIVGRMLLC 189 (307)
Q Consensus 180 T~Ir~rIl~~ 189 (307)
|.||+++...
T Consensus 157 T~IR~~i~~g 166 (189)
T 2h29_A 157 TMIRQRVSEG 166 (189)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999998754
No 25
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.48 E-value=9e-14 Score=121.01 Aligned_cols=123 Identities=17% Similarity=0.145 Sum_probs=84.3
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEE-eCChhhhhcCCCCCCCHHHHHHHHHHc-cCc----cEEEEcCCCc-
Q 021802 53 RVYMDGCFDMMHYGHCNALRQARALGDQLVVGV-VSDAEIIANKGPPVTPLHERMIMVNAV-KWV----DEVISDAPYA- 125 (307)
Q Consensus 53 ~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV-~sD~~i~~~Kg~pi~s~eER~~ll~~~-k~V----D~Vv~~~py~- 125 (307)
++++.|+|||+|.||+.++++|++.+|+++|++ +.++ ..|.++++|.+||+++++.. ... |.+.+ .+++
T Consensus 5 ~~i~~G~Fdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~---p~~~~~~~~~~~R~~~~~~a~~~~~~~~~~v~v-~~~d~ 80 (181)
T 1ej2_A 5 RGLLVGRMQPFHRGHLQVIKSILEEVDELIICIGSAQL---SHSIRDPFTAGERVMMLTKALSENGIPASRYYI-IPVQD 80 (181)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC---CSSSSSCSCHHHHHHHHHHHHHHTTCCGGGEEE-EECCC
T ss_pred EEEEEEEcCCcCHHHHHHHHHHHHhCCeeEEEECCCCC---CcCCCCCCCHHHHHHHHHHHHhhCCCCCCcEEE-EecCc
Confidence 689999999999999999999999999998888 4443 22334578999999999873 333 45544 3332
Q ss_pred --cc---HHHHHHHHHhcCccEEEEcCCCCcCCCCCchHHHHHh-CCEEEEcCCCC--CCCHHHHHHHHHhh
Q 021802 126 --IT---KDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAKK-AGRYKQIKRTE--GVSSTDIVGRMLLC 189 (307)
Q Consensus 126 --~t---~dfle~ll~~l~~d~VV~GdD~~fg~~g~d~y~~lk~-~g~v~vv~rt~--~VSST~Ir~rIl~~ 189 (307)
.. .+|++++. .+++.+++|.|+. ..+.+. ...+..++... .||||.||+++...
T Consensus 81 ~~~~~~w~~~~~~l~--~~~~~~v~gr~~~--------~~~~~~~~i~~~~~~~~~~~~ISST~IR~~l~~G 142 (181)
T 1ej2_A 81 IECNALWVGHIKMLT--PPFDRVYSGNPLV--------QRLFSEDGYEVTAPPLFYRDRYSGTEVRRRMLDD 142 (181)
T ss_dssp CSCHHHHHHHHHHHS--CCCSEEECCCHHH--------HHHHHHTTCCEECCCCSSTTTSSHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHC--CCCCEEEECCHHH--------HHHHHhCCeEEEecCCCccCcCcHHHHHHHHHcC
Confidence 11 23444332 4788899886641 122332 34555565543 59999999999754
No 26
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=99.48 E-value=2.5e-13 Score=130.85 Aligned_cols=93 Identities=20% Similarity=0.220 Sum_probs=76.3
Q ss_pred CCCeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChh--hhhcCC-CCCCCHHHHHHHHHHccCccEEEEcCCCc
Q 021802 49 KKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAE--IIANKG-PPVTPLHERMIMVNAVKWVDEVISDAPYA 125 (307)
Q Consensus 49 ~~~~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~--i~~~Kg-~pi~s~eER~~ll~~~k~VD~Vv~~~py~ 125 (307)
.....|+++|.|||+|.||+.+|++|++ .+ ++++|-+.+. +. ++ +.++|.++|.++++.+ |||.|++ .||.
T Consensus 50 ~~~~~v~~lG~FDg~H~GHq~lI~~a~~-~~-~~~~Vms~~~~~vq--rg~~~l~~~~~R~~~~~~~-GvD~vie-lpF~ 123 (357)
T 3gmi_A 50 NKDKIVCDFTEYNPLHKGHKYALEKGKE-HG-IFISVLPGPLERSG--RGIPYFLNRYIRAEMAIRA-GADIVVE-GPPM 123 (357)
T ss_dssp TCCCEEEEECCCTTCCHHHHHHHHHHHT-SS-EEEEEECCTTSBCT--TSSBCSSCHHHHHHHHHHH-TCSEEEE-CCCG
T ss_pred CCCCEEEEEEecCccCHHHHHHHHHHHH-cC-CeEEEEcCchHHhc--CCCCcCCCHHHHHHHHHHC-CCCEEEE-cCch
Confidence 3345799999999999999999999999 44 5555555432 32 34 6799999999999998 9999999 8985
Q ss_pred c---cHHHHHH---HHHhcCccEEEEcC
Q 021802 126 I---TKDFMKK---LFDEYNIDYIIHGD 147 (307)
Q Consensus 126 ~---t~dfle~---ll~~l~~d~VV~Gd 147 (307)
. +++|++. ++.++++++||+|.
T Consensus 124 ~~~s~~~Fv~~~v~ll~~l~~~~iv~G~ 151 (357)
T 3gmi_A 124 GIMGSGQYMRCLIKMFYSLGAEIIPRGY 151 (357)
T ss_dssp GGSCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 3 4789876 88889999999998
No 27
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.48 E-value=8.5e-14 Score=130.25 Aligned_cols=130 Identities=17% Similarity=0.063 Sum_probs=89.9
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHHccCccE----EEEcCCCcc
Q 021802 51 PVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVKWVDE----VISDAPYAI 126 (307)
Q Consensus 51 ~~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~~k~VD~----Vv~~~py~~ 126 (307)
.++++++|+|||+|.||+.++++|++.+|+++|+|.+++.- .+....++.++|++|++.. ..|. ++. .++.-
T Consensus 7 ~~~~i~~G~FdP~H~GH~~li~~a~~~~d~v~v~v~~~~~p--~~~~~~~~~~~R~~m~~~~-~~~~~~~~~~~-i~~~d 82 (341)
T 2qjo_A 7 YQYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRVA--ADTRNPWRSPERMAMIEAC-LSPQILKRVHF-LTVRD 82 (341)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHEEEEEEEEEEETCC--CCSSSCSCHHHHHHHHHTT-SCHHHHTTEEE-EEEEC
T ss_pred eeEEEEEEEeCCCCHHHHHHHHHHHHhCCeEEEEECCcccC--CCCCCCCCHHHHHHHHHHH-hhhccCCeEEE-EECCC
Confidence 35799999999999999999999999999988877775421 2223458999999999985 4443 433 23321
Q ss_pred -------cHHHHHHHHHhcC---ccEEEEcCCCCcCCCCCchHHHHHh--CCEEEEcCCCCCCCHHHHHHHHHhhh
Q 021802 127 -------TKDFMKKLFDEYN---IDYIIHGDDPCVLPDGTDAYELAKK--AGRYKQIKRTEGVSSTDIVGRMLLCV 190 (307)
Q Consensus 127 -------t~dfle~ll~~l~---~d~VV~GdD~~fg~~g~d~y~~lk~--~g~v~vv~rt~~VSST~Ir~rIl~~~ 190 (307)
..+|++++++.+. ++++++|.++.... . ..+. ...+..++....||||.||+++....
T Consensus 83 ~~~~~~~w~~~~~~l~~~l~r~~~~~~~~g~~~~~~~----~--~~~~~~~~~~~~~~~~~~iSST~IR~~l~~g~ 152 (341)
T 2qjo_A 83 WLYSDNLWLAAVQQQVLKITGGSNSVVVLGHRKDASS----Y--YLNLFPQWDYLETGHYPDFSSTAIRGAYFEGK 152 (341)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCSCEEEEECCCSGGG----G--GGGSCTTSEEEECCCCTTCCHHHHHHHHHHTC
T ss_pred CcCChHHHHHHHHHHhHHhcCCCceEEEEcCCCCCCh----H--HHHhccccceeecccCCCCCcHHHHHHHHcCC
Confidence 1466655555443 78999998864211 1 1111 34566666567899999999998553
No 28
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.46 E-value=1.5e-14 Score=123.21 Aligned_cols=125 Identities=22% Similarity=0.304 Sum_probs=85.3
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcC-CeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHH-c-cC----ccEEEEcCCCc
Q 021802 53 RVYMDGCFDMMHYGHCNALRQARALG-DQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-V-KW----VDEVISDAPYA 125 (307)
Q Consensus 53 ~V~~~G~FD~lH~GH~~lL~qAk~~g-d~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~-~-k~----VD~Vv~~~py~ 125 (307)
++++.|+||++|.||+.++++|++++ |+++|++++++...+ +..++++.+||++|++. + +. +.-+-+..+|.
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~~~~~k-~~~~~~~~~~R~~ml~~a~~~~~~~~~~i~~i~D~~g 80 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARA-RIRSVLPFAIRAENVKRYVMRKYGFEPEIVKITNPYG 80 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHHH-HSCCCSCHHHHHHHHHHHHHHHHSSCCEEEEECSTTT
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCCccccc-cCCCCCCHHHHHHHHHHHHhcccCCcEEEEeecCCCC
Confidence 58999999999999999999999986 899999999986522 13689999999999887 3 22 22222234454
Q ss_pred ccHHHHHHHHHhcCccEEEEcCCCCcCCCCCchHHHHH-hCC---EEEEcCCC-----CCCCHHHHHHHHHh
Q 021802 126 ITKDFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYELAK-KAG---RYKQIKRT-----EGVSSTDIVGRMLL 188 (307)
Q Consensus 126 ~t~dfle~ll~~l~~d~VV~GdD~~fg~~g~d~y~~lk-~~g---~v~vv~rt-----~~VSST~Ir~rIl~ 188 (307)
.+. ..++|++|++.+-..+ +..-.++.+ .+. .+.+++.. +.||||.||++++.
T Consensus 81 ~~~--------~~~~d~ivvs~Et~~~--~~~l~~~~~~~G~~~l~V~~v~~~~~~~~~~iSST~IR~~~id 142 (148)
T 3do8_A 81 KTL--------DVDFEYLVVSPETYEM--ALKINQKREELGKRKITIVKVDWMMAEDGKPISSTRIKRGEID 142 (148)
T ss_dssp TTT--------TSCCSEEEECTTTHHH--HHHHHHHHHHHTCCCCEEEEEECCC-------CCCCCCCSCCC
T ss_pred CCC--------CCCCCEEEEChhhccc--HHHHHHHHHHcCCCeeEEEEeccEEcCCCCEEEHHHHHHHHHh
Confidence 332 2578999999885432 111111222 245 56666553 46999999998764
No 29
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.43 E-value=3.4e-13 Score=117.97 Aligned_cols=132 Identities=16% Similarity=0.112 Sum_probs=91.7
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHH-ccCcc--EEEEc-------
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVD--EVISD------- 121 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~-~k~VD--~Vv~~------- 121 (307)
+++++.|+||++|.||+.+++ |.+..|++++++..+. ..| +++.+.++|++|++. ++..+ .+.+.
T Consensus 3 ~igi~gGsFdPih~GHl~i~~-a~~~~d~v~~~p~~~~---~~k-~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~~l~ 77 (177)
T 3h05_A 3 KIAIFGSAFNPPSLGHKSVIE-SLSHFDLVLLEPSIAH---AWG-KNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQALY 77 (177)
T ss_dssp EEEEEEECCSSCCHHHHHHHT-TCTTSSEEEEEECC-----------CCCHHHHHHHHHHHHHHHCCTTEEECCHHHHHC
T ss_pred EEEEEEeccchhhHHHHHHHH-HHHHCCEEEEEECCCC---CCC-CCCCCHHHHHHHHHHHHhcCCCCcEEEEehhhhcc
Confidence 468999999999999999998 7777799999988752 123 478999999999987 33221 23221
Q ss_pred -CC-CcccHHHHHHHHHhcC-cc-EEEEcCCCC-cCCCCCchHHHHHhCCEEEEcCCCCCCCHHHHHHHHHhh
Q 021802 122 -AP-YAITKDFMKKLFDEYN-ID-YIIHGDDPC-VLPDGTDAYELAKKAGRYKQIKRTEGVSSTDIVGRMLLC 189 (307)
Q Consensus 122 -~p-y~~t~dfle~ll~~l~-~d-~VV~GdD~~-fg~~g~d~y~~lk~~g~v~vv~rt~~VSST~Ir~rIl~~ 189 (307)
.. .+.|.+.++.+.+.+. .+ ++++|.|.. ..+.|.+ ++.+-+...+.+++|...||||+||+++...
T Consensus 78 ~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~-~~~l~~~~~~vv~~r~~~iSST~IR~~i~~g 149 (177)
T 3h05_A 78 QPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFAKFYK-AEEITERWTVMACPEKVKIRSTDIRNALIEG 149 (177)
T ss_dssp ----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGGGSTT-HHHHHHHSEEEECCCSSCCCHHHHHHHHHHT
T ss_pred cCCCCcchHHHHHHHHHHhcCCCeEEEEecchhhhcccchh-HHHHHHhCCEEEEcCCCCCcHHHHHHHHHcC
Confidence 11 3356677776655552 34 688898843 3356765 4444445689999998899999999999865
No 30
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.38 E-value=7.5e-12 Score=107.59 Aligned_cols=125 Identities=19% Similarity=0.260 Sum_probs=80.1
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEE-eCChhhhhcCCCCCCCHHHHHHHHHH-ccCcc-EEEEcCCCc---c
Q 021802 53 RVYMDGCFDMMHYGHCNALRQARALGDQLVVGV-VSDAEIIANKGPPVTPLHERMIMVNA-VKWVD-EVISDAPYA---I 126 (307)
Q Consensus 53 ~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV-~sD~~i~~~Kg~pi~s~eER~~ll~~-~k~VD-~Vv~~~py~---~ 126 (307)
++++.|+||++|.||+.++++|++.+|+++|++ +.++ ..|..+.++.++|++|++. ++..+ .+.. .+++ .
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~---p~~~~~~~~~~~R~~m~~~~~~~~~~~v~v-~~~d~l~~ 77 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQK---SHTLENPFTAGERILMITQSLKDYDLTYYP-IPIKDIEF 77 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC---CSSSSCCSCHHHHHHHHHHHHTTSSCEEEE-EECCCCSC
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhCCeEEEEEcCCCC---CCCCCCCCCHHHHHHHHHHHHhcCCCceEE-EeeCCccc
Confidence 589999999999999999999999999998888 4454 2233345799999999996 66665 4433 1221 1
Q ss_pred cHHHHHHHHH-hcCccEEEEcCCCCcCCCCCchHHHHHh-CCEEEEcCCCC--CCCHHHHHHHHHhh
Q 021802 127 TKDFMKKLFD-EYNIDYIIHGDDPCVLPDGTDAYELAKK-AGRYKQIKRTE--GVSSTDIVGRMLLC 189 (307)
Q Consensus 127 t~dfle~ll~-~l~~d~VV~GdD~~fg~~g~d~y~~lk~-~g~v~vv~rt~--~VSST~Ir~rIl~~ 189 (307)
...+.+.+.+ .+.++.++.|.+. ...+... ...+...+..+ .||||.||+++...
T Consensus 78 ~~~w~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~~~~g 136 (168)
T 1f9a_A 78 NSIWVSYVESLTPPFDIVYSGNPL--------VRVLFEERGYEVKRPEMFNRKEYSGTEIRRRMLNG 136 (168)
T ss_dssp GGGHHHHHHHHSCCCSEEECCCHH--------HHHHHHHTTCEEECCCCCSTTTSSHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCCEEEECcHH--------HHHhhhhcCcEEEeCCccccCcccHHHHHHHHHcC
Confidence 1223322111 1456777766432 1122222 23444444433 59999999999754
No 31
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=99.33 E-value=5.4e-12 Score=117.64 Aligned_cols=84 Identities=21% Similarity=0.244 Sum_probs=60.4
Q ss_pred CCeEEEEecccCcCCHHHHHHHHHHHHcC--C---eEEEEE---eCChhhhhcCCCCCCCHHHHHHHHHH-ccCccEEEE
Q 021802 50 KPVRVYMDGCFDMMHYGHCNALRQARALG--D---QLVVGV---VSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVIS 120 (307)
Q Consensus 50 ~~~~V~~~G~FD~lH~GH~~lL~qAk~~g--d---~LiVgV---~sD~~i~~~Kg~pi~s~eER~~ll~~-~k~VD~Vv~ 120 (307)
.++++++.|+||++|.||+.++++|++.+ + +++|++ ++++ ..| +++++.++|++|++. +.+.+.+.+
T Consensus 7 ~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~---~~K-~~l~s~~~R~~ml~~ai~~~~~~~v 82 (279)
T 1kqn_A 7 TEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDA---YKK-KGLIPAYHRVIMAELATKNSKWVEV 82 (279)
T ss_dssp EEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGG---GCC-TTCCCHHHHHHHHHHHTTTCSSEEE
T ss_pred CceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCC---ccc-cCCCCHHHHHHHHHHHhcCCCcEEE
Confidence 34568999999999999999999999876 3 254432 3322 233 468999999999997 568888877
Q ss_pred cCCC-------cccHHHHHHHHHhc
Q 021802 121 DAPY-------AITKDFMKKLFDEY 138 (307)
Q Consensus 121 ~~py-------~~t~dfle~ll~~l 138 (307)
.+| +.|.+.++.+-+++
T Consensus 83 -~~~E~~~~~~syTidtL~~l~~~~ 106 (279)
T 1kqn_A 83 -DTWESLQKEWKETLKVLRHHQEKL 106 (279)
T ss_dssp -CCTGGGCSSCCCHHHHHHHHHHHH
T ss_pred -eccccccCCCCcHHHHHHHHHHHH
Confidence 444 34566676655555
No 32
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=99.31 E-value=2.2e-13 Score=127.26 Aligned_cols=136 Identities=17% Similarity=0.174 Sum_probs=87.8
Q ss_pred hhhcCCCCeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCC---CCCCCHHHHHHHHHHccCccEEEE
Q 021802 44 WTRKKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKG---PPVTPLHERMIMVNAVKWVDEVIS 120 (307)
Q Consensus 44 ~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg---~pi~s~eER~~ll~~~k~VD~Vv~ 120 (307)
.++..++ +|.+.|+||++|.||+.+|++|++.+|.++|++..+|.-...+. +.+.+.++|.++++++ +||.++.
T Consensus 16 ~~r~~g~--~V~~vgtfdgLH~GH~sLI~~A~~~ad~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~-GVD~vf~ 92 (280)
T 2ejc_A 16 EMREKKK--TIGFVPTMGYLHEGHLSLVRRARAENDVVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKE-NVDCIFH 92 (280)
T ss_dssp HHHHTTC--CEEEEEECSCCCHHHHHHHHHHHHHSSEEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTT-TCSEEEC
T ss_pred HHHhcCC--EEEEEcCCccccHHHHHHHHHHHHhCCEEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHC-CCCEEEe
Confidence 3444443 35666999999999999999999999999999977764221111 3467899999999998 7999988
Q ss_pred cCCCc--ccHHHH--------HH-HHHhcCccE------------EEEc-CCCCcCCCCCchHHHHHhC-----CEEEE-
Q 021802 121 DAPYA--ITKDFM--------KK-LFDEYNIDY------------IIHG-DDPCVLPDGTDAYELAKKA-----GRYKQ- 170 (307)
Q Consensus 121 ~~py~--~t~dfl--------e~-ll~~l~~d~------------VV~G-dD~~fg~~g~d~y~~lk~~-----g~v~v- 170 (307)
.++. .+++|. .. +..+.+|.+ .++| +|++||.+.......++++ ..+.+
T Consensus 93 -p~~~~m~p~~f~~~v~~~~~~~~l~G~~rp~hF~Gv~tvv~kLf~iv~p~~~~FG~kd~qq~~~l~~~~~dl~~~v~iv 171 (280)
T 2ejc_A 93 -PSVEEMYPPDFSTYVEETKLSKHLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMVRDLNMDVEMI 171 (280)
T ss_dssp -CCHHHHSCTTCCCCCCCCSGGGTTTGGGSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHTTCCCEEE
T ss_pred -CCHHHCCCcCceEEEEcCCcceEEecCCCCCeecceEEEEeeeceeccCceEEeCCCCCcCHHHHHHHHHHcCCeEEEE
Confidence 4431 112232 11 112223333 3334 5899997766666666653 23432
Q ss_pred -cCCC-----CCCCHHHHH
Q 021802 171 -IKRT-----EGVSSTDIV 183 (307)
Q Consensus 171 -v~rt-----~~VSST~Ir 183 (307)
++.. ..+|||.+.
T Consensus 172 ~vp~vr~~dGlaiSSrn~y 190 (280)
T 2ejc_A 172 ECPIVREPDGLAMSSRNVY 190 (280)
T ss_dssp EECCCBCTTSCBCCGGGGG
T ss_pred eeCcEEcCCCCEeccCccc
Confidence 4442 358998753
No 33
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=99.22 E-value=2.8e-11 Score=110.81 Aligned_cols=88 Identities=18% Similarity=0.176 Sum_probs=58.5
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCe----EEEEEeCChhhhhcCCCCCCCHHHHHHHHHH-ccCccEEEEc----
Q 021802 51 PVRVYMDGCFDMMHYGHCNALRQARALGDQ----LVVGVVSDAEIIANKGPPVTPLHERMIMVNA-VKWVDEVISD---- 121 (307)
Q Consensus 51 ~~~V~~~G~FD~lH~GH~~lL~qAk~~gd~----LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~-~k~VD~Vv~~---- 121 (307)
.+++++.|+||++|.||+.++++|++.++. .+|++...|.-...+.+++++.++|++|++. ++..+.+.++
T Consensus 6 ~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~~ai~~~~~~~v~~~E~ 85 (252)
T 1nup_A 6 PVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIRVDPWES 85 (252)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGGCSSEEECCHHH
T ss_pred ceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCCCCCCHHHHHHHHHHHhcCCCceEeehHHh
Confidence 456899999999999999999999988632 4544333222111122468999999999986 5555555541
Q ss_pred --CCCcccHHHHHHHHHhc
Q 021802 122 --APYAITKDFMKKLFDEY 138 (307)
Q Consensus 122 --~py~~t~dfle~ll~~l 138 (307)
..+..|.+.++.+.+++
T Consensus 86 ~~~~~syTidtL~~l~~~~ 104 (252)
T 1nup_A 86 EQAQWMETVKVLRHHHSKL 104 (252)
T ss_dssp HSSSCCCHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHH
Confidence 22344566776654555
No 34
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.20 E-value=1.1e-10 Score=111.19 Aligned_cols=128 Identities=20% Similarity=0.190 Sum_probs=83.1
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhh-----hhcCCCCCCCHHHHHHHHHH-ccCccE-EEE----
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEI-----IANKGPPVTPLHERMIMVNA-VKWVDE-VIS---- 120 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i-----~~~Kg~pi~s~eER~~ll~~-~k~VD~-Vv~---- 120 (307)
+++++.|+||++|.||+.++++|++.+|+|+|+|.+++.. ...+.+..+|.+||++|++. ++..+. +.+
T Consensus 3 ~~~i~~GtFdP~h~GHl~~~~~a~~~~d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~~~~v~~~~ 82 (365)
T 1lw7_A 3 KVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIHHLV 82 (365)
T ss_dssp CEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTSTTTTTEEEEEEE
T ss_pred cEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEECCCCccccccccccccCCCCCHHHHHHHHHHHhhcCCCcEEEEEec
Confidence 3589999999999999999999999999999999998742 11111234999999999986 555443 322
Q ss_pred c--CCC--ccc---HHHHHHHHH--hcCccEEEEcCCCCcCCCCCchHHHHHhC-CEEEEcC--C-CCCCCHHHHHHHH
Q 021802 121 D--APY--AIT---KDFMKKLFD--EYNIDYIIHGDDPCVLPDGTDAYELAKKA-GRYKQIK--R-TEGVSSTDIVGRM 186 (307)
Q Consensus 121 ~--~py--~~t---~dfle~ll~--~l~~d~VV~GdD~~fg~~g~d~y~~lk~~-g~v~vv~--r-t~~VSST~Ir~rI 186 (307)
+ .|+ ... .+.+..++. .++++.++.++++. .....+.. .++..++ + ...||||.||+..
T Consensus 83 ~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~e~~~-------~~~~~~~~~~e~v~l~~~~~~~~iSsT~IRe~~ 154 (365)
T 1lw7_A 83 EDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQD-------KAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTP 154 (365)
T ss_dssp CSSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGG-------HHHHHHHTCCEEECCCSSCCSSCCCHHHHHHCG
T ss_pred cCCCCCCchHHHHHHHHHHHHhhccCCCCcEEEECCCCC-------HHHHHHHcCCceEEeCCcccCCCCCHHHHHhCh
Confidence 1 121 000 122333444 36788777554432 11222333 4566665 3 3579999999865
No 35
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.20 E-value=9.5e-12 Score=113.44 Aligned_cols=51 Identities=35% Similarity=0.630 Sum_probs=44.9
Q ss_pred CCCCCCCeEEEEeCcccccCHHHHHHHHHHHhC--CCEEEEEEeCcccccccC
Q 021802 243 KGPGPDARIIYIDGAFDLFHAGHVEILRIARGL--GDFLLVGIHNDQTVRLKN 293 (307)
Q Consensus 243 ~~~~~~~~~v~~~G~FDl~H~GHi~~L~~a~~~--g~~liVgv~~D~~v~~~~ 293 (307)
..|.++.++||++|+||+||.||+++|++|+++ ||+|||||++|+.+.++|
T Consensus 70 ~~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~K 122 (236)
T 3hl4_A 70 GTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFK 122 (236)
T ss_dssp CCCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHT
T ss_pred CCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcC
Confidence 345566789999999999999999999999999 699999999999887654
No 36
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.07 E-value=1e-09 Score=103.26 Aligned_cols=129 Identities=16% Similarity=0.166 Sum_probs=80.0
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHHc-cCc----cEEEE--cCC-
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAV-KWV----DEVIS--DAP- 123 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~~-k~V----D~Vv~--~~p- 123 (307)
+++++.|+||++|.||+.++++|++.+|+++|+|.+++.- .+..+.+|.++|++|++.. +.. +.+.. ...
T Consensus 8 ~~~i~~GtFdP~h~GHl~~~~~a~~~~d~~~~~v~~~~~~--~~~~~~~~~~~R~~m~~~~~~~~~~~~~~~~~~~~~d~ 85 (352)
T 2qjt_B 8 DISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNT--PNIKNPFSFEQRKQMIESDLQVAGIDLDTVVIEPLADY 85 (352)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHSEEEEEEEEEEESCC--CCSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEEEECC
T ss_pred cEEEEEEecCCCChHHHHHHHHHHHhCCcEEEEECCCCCC--cccCCCCCHHHHHHHHHHHhccccCccceEEEEEcCCC
Confidence 4689999999999999999999999999999999885421 1224668999999999873 111 23322 111
Q ss_pred -Cc--ccHHHHHHHHHh---cCccEEEEcCCCCcCCCCCchHHHHHhC--CEEEEcCCCCCCCHHHHHHHHHh
Q 021802 124 -YA--ITKDFMKKLFDE---YNIDYIIHGDDPCVLPDGTDAYELAKKA--GRYKQIKRTEGVSSTDIVGRMLL 188 (307)
Q Consensus 124 -y~--~t~dfle~ll~~---l~~d~VV~GdD~~fg~~g~d~y~~lk~~--g~v~vv~rt~~VSST~Ir~rIl~ 188 (307)
+. ...+++.+.+.+ +.++.+++|.. .+.+.+ .+... .....++....+|||.||+++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~-----~~~~~~-~~~~~~~~~~~~~~~~~~iSST~IR~~~~~ 152 (352)
T 2qjt_B 86 FYQEQKWQDELRKNVYKHAKNNNSIAIVGHI-----KDSSSY-YIRSFPEWDYIGVDNYKNFNATEFRQKFYN 152 (352)
T ss_dssp TTCHHHHHHHHHHHHTTTSCSSCCEEECCBS-----SSSHHH-HHHHCTTSEECCBCCTTCCCHHHHHHHHHT
T ss_pred cCChHHHHHHHHHHHHHhcccCCeEEEEcCC-----CCcchh-hhhcCCccceeccCCCCCCCchHHHHHHhc
Confidence 11 112333332211 23567777743 122233 22221 22333344567999999999985
No 37
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=99.01 E-value=1.8e-11 Score=114.17 Aligned_cols=127 Identities=14% Similarity=0.114 Sum_probs=89.6
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCC---CCCCCHHHHHHHHHHccCccEEEEcCCCc--c
Q 021802 52 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKG---PPVTPLHERMIMVNAVKWVDEVISDAPYA--I 126 (307)
Q Consensus 52 ~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg---~pi~s~eER~~ll~~~k~VD~Vv~~~py~--~ 126 (307)
..|.++|+ +|.||+.++++|++.++.++|.+..+|.-...+. +.+.+.++|.++++++ +||.++. .+|+ .
T Consensus 20 ~~VpTmG~---lH~GH~~Li~~A~~~a~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~-GvD~vf~-p~f~~m~ 94 (276)
T 1v8f_A 20 GFVPTMGY---LHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEA-GVDLLFA-PGVEEMY 94 (276)
T ss_dssp EEEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHT-TCSEEEC-CCHHHHS
T ss_pred eEEEeCCC---ccHHHHHHHHHHHHhCCEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhC-CCCEEEe-CChHhCC
Confidence 45789999 9999999999999999999999999885322221 4689999999999998 8999987 5543 1
Q ss_pred cHHHHHHHHHhcCccEEEEcC----------------------C-CCcCCCCCchHHHHHhC-----CEEEEc--CC---
Q 021802 127 TKDFMKKLFDEYNIDYIIHGD----------------------D-PCVLPDGTDAYELAKKA-----GRYKQI--KR--- 173 (307)
Q Consensus 127 t~dfle~ll~~l~~d~VV~Gd----------------------D-~~fg~~g~d~y~~lk~~-----g~v~vv--~r--- 173 (307)
+++|...+....+++.+++|. | ++||.+.......+++. ..+.++ +.
T Consensus 95 p~~f~~~v~~~~~~~~vl~G~~RpghF~GV~TVv~kLf~iv~Pd~~~FG~kd~qq~~~l~~~~~dl~~~v~iv~~p~vr~ 174 (276)
T 1v8f_A 95 PEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVARLFLLVQPQRAYFGEKDYQQLLVVRRMVRDLGFPVEVVGVPTVRE 174 (276)
T ss_dssp CTTCCEEEEECSHHHHSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHHTCCCEEEEECCCBC
T ss_pred CcCCeEEEEecCCcceEEecCCCCCeecceeehhhHhhcccCCCEEEECCCCCcCHHHHHHHHHHcCCeEEEEecCcEEc
Confidence 233432211013455666676 8 88987766666666653 344544 43
Q ss_pred --CCCCCHHHHH
Q 021802 174 --TEGVSSTDIV 183 (307)
Q Consensus 174 --t~~VSST~Ir 183 (307)
...+|||.|+
T Consensus 175 ~dGlaiSSrnir 186 (276)
T 1v8f_A 175 EDGLALSSRNVY 186 (276)
T ss_dssp TTSCBCCGGGGG
T ss_pred CCCCEeEEeEEE
Confidence 2358999986
No 38
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=98.92 E-value=4.1e-10 Score=105.26 Aligned_cols=135 Identities=13% Similarity=0.153 Sum_probs=93.3
Q ss_pred hhhcCCCCe-EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCC---CCCCCHHHHHHHHHHccCccEEE
Q 021802 44 WTRKKKKPV-RVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKG---PPVTPLHERMIMVNAVKWVDEVI 119 (307)
Q Consensus 44 ~~~~~~~~~-~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg---~pi~s~eER~~ll~~~k~VD~Vv 119 (307)
.++..++.+ -|.++|. +|.||+.++++|++.++.++|.+..+|.-...+. +.+.+.+++.++++++ +||.++
T Consensus 17 ~~r~~g~~I~fVpTmG~---lH~GH~~LI~~a~~~a~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~-GvD~vf 92 (283)
T 3ag6_A 17 AAKRSGTTIGFIPTMGA---LHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEV-GADIVF 92 (283)
T ss_dssp HHHHTTCCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHH-TCSEEE
T ss_pred HHHhcCCcEEEEECCcc---ccHHHHHHHHHHHHhCCEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEE
Confidence 444444433 2459997 9999999999999999999999988884322221 4588999999999998 999998
Q ss_pred EcCCCc--ccHHH--------HHH-HHHhcCcc-------------EEEEcCCCCcCCCCCchHHHHHhC-----CEEEE
Q 021802 120 SDAPYA--ITKDF--------MKK-LFDEYNID-------------YIIHGDDPCVLPDGTDAYELAKKA-----GRYKQ 170 (307)
Q Consensus 120 ~~~py~--~t~df--------le~-ll~~l~~d-------------~VV~GdD~~fg~~g~d~y~~lk~~-----g~v~v 170 (307)
. .+|. .+++| +.+ +...+++. .+|.|+|++||.+.......+++. ..+.+
T Consensus 93 ~-p~~~~myp~~f~~~v~~~~l~~~L~G~~rp~hF~GV~TVV~KLf~iV~p~~~~FG~Kd~qql~~l~~m~~dl~~~V~i 171 (283)
T 3ag6_A 93 H-PAVEDMYPGELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQMVKDFNHAVEI 171 (283)
T ss_dssp C-CCHHHHSCSSCSEEEEECGGGSSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHTTCCCEE
T ss_pred e-CCHHHCCCCCceEEEeccccchhhccCCCCCeecchhhHhhhhcEEecCceEEECCCCccCHHHHHHHHHHcCCeEEE
Confidence 8 4431 11223 211 22347888 899999999997766666666653 34443
Q ss_pred --cCCC-----CCCCHHHHH
Q 021802 171 --IKRT-----EGVSSTDIV 183 (307)
Q Consensus 171 --v~rt-----~~VSST~Ir 183 (307)
++.. ..+|||.+.
T Consensus 172 v~vp~vr~~dGlaiSSrn~y 191 (283)
T 3ag6_A 172 IGIDIVREADGLAKSSRNVY 191 (283)
T ss_dssp EEECCCBCTTSCBCCGGGGG
T ss_pred EecCcEEeCCCCEecCCccc
Confidence 4442 358998763
No 39
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=98.72 E-value=1.3e-08 Score=87.43 Aligned_cols=39 Identities=23% Similarity=0.443 Sum_probs=36.5
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~ 287 (307)
++++++.|+||++|.||+.++++|++++|+|+|++.+|.
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~~D~viv~v~~~~ 40 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSS 40 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEECCG
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHhCCceEEEEccCC
Confidence 368999999999999999999999999999999999885
No 40
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=98.69 E-value=1.2e-08 Score=85.55 Aligned_cols=42 Identities=36% Similarity=0.626 Sum_probs=39.4
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCccccc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTVR 290 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~~v~ 290 (307)
++++++.|+||.+|.||+.+|++|++.++.++|+++.|....
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~~~~~v~v~~~~~~~ 43 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLGDELVVVVARDSTAR 43 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTSSEEEEEECCHHHHH
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhCCCcEEEEECCcchh
Confidence 578999999999999999999999999999999999997665
No 41
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=98.65 E-value=1.6e-08 Score=87.05 Aligned_cols=39 Identities=28% Similarity=0.381 Sum_probs=36.4
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~ 287 (307)
+++++++|+||++|.||+.++++|++++|+|+|+++.|.
T Consensus 5 m~i~i~~GsFDPiH~GHl~li~~A~~~~d~viv~v~~~~ 43 (162)
T 4f3r_A 5 KPIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAPTS 43 (162)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGCSEEEEEECCC-
T ss_pred eEEEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEEecCC
Confidence 478999999999999999999999999999999999875
No 42
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=98.61 E-value=5.3e-09 Score=98.49 Aligned_cols=126 Identities=13% Similarity=0.124 Sum_probs=83.6
Q ss_pred EEEecccCcCCHHHHHHHHHHHH-cCCeEEEEEeCChhhhhcCC---CCCCCHHHHHHHHHHccCccEEEEcCCCc--cc
Q 021802 54 VYMDGCFDMMHYGHCNALRQARA-LGDQLVVGVVSDAEIIANKG---PPVTPLHERMIMVNAVKWVDEVISDAPYA--IT 127 (307)
Q Consensus 54 V~~~G~FD~lH~GH~~lL~qAk~-~gd~LiVgV~sD~~i~~~Kg---~pi~s~eER~~ll~~~k~VD~Vv~~~py~--~t 127 (307)
|.+..++..+|.||+.|+++|++ .++.++|.+..+|.-...+. +.+.+.+++.++++++ +||.++. .+|+ .+
T Consensus 35 vg~VpTmG~LH~GH~sLI~~A~~~~a~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~-GVD~vf~-p~~~~myP 112 (301)
T 3cov_A 35 VMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAE-GVEIAFT-PTTAAMYP 112 (301)
T ss_dssp EEEEEECSCCCHHHHHHHHHHHTSTTEEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHT-TCCEEEC-CCHHHHCT
T ss_pred EEEEecCCcccHHHHHHHHHHHHhcCCEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEEe-CCHHHCCC
Confidence 44444444499999999999999 89989999988874322222 3588999999999998 9999988 4442 12
Q ss_pred HHHHHHHHHhcCccEEEEcC-----------------------CCCcCCCCCchHHHHHhC-----CEEEE--cCCC---
Q 021802 128 KDFMKKLFDEYNIDYIIHGD-----------------------DPCVLPDGTDAYELAKKA-----GRYKQ--IKRT--- 174 (307)
Q Consensus 128 ~dfle~ll~~l~~d~VV~Gd-----------------------D~~fg~~g~d~y~~lk~~-----g~v~v--v~rt--- 174 (307)
++|...+.- -++..+++|. |+.||.+.......+++. ..+.+ ++..
T Consensus 113 ~~f~~~v~~-~~~~~vl~G~~RPghF~GV~TVV~KLfniv~P~~a~FG~Kd~qql~~lr~mv~dl~~~V~iv~vp~vRe~ 191 (301)
T 3cov_A 113 DGLRTTVQP-GPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREA 191 (301)
T ss_dssp TCSCSEEEC-CGGGGSGGGSSCTTHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHHTTCCCEEEEECCCBCT
T ss_pred CCceEEEec-CCcceeeecCCCCChhhhhhHHHHHHhhccCCCeEEECCCcccCHHHHHHHHHHcCCeEEEEeeCcEEeC
Confidence 233321111 1345667777 899997766666666653 23443 4432
Q ss_pred --CCCCHHHH
Q 021802 175 --EGVSSTDI 182 (307)
Q Consensus 175 --~~VSST~I 182 (307)
..+|||..
T Consensus 192 dGlaiSSrN~ 201 (301)
T 3cov_A 192 DGLAMSSRNR 201 (301)
T ss_dssp TSCBCCTTGG
T ss_pred CCCEEEeccc
Confidence 24888764
No 43
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=98.60 E-value=4.2e-08 Score=80.39 Aligned_cols=39 Identities=41% Similarity=0.837 Sum_probs=36.9
Q ss_pred eEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCccc
Q 021802 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQT 288 (307)
Q Consensus 250 ~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~~ 288 (307)
+++++.|+||.+|.||+.++++|++.++.++|+++.|..
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~~~~~v~v~~~~~ 40 (132)
T 2b7l_A 2 KRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEF 40 (132)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEEECHHH
T ss_pred eEEEEeeecCcCCHHHHHHHHHHHHhCCcEEEEEECCHH
Confidence 679999999999999999999999999999999999974
No 44
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=98.59 E-value=4.5e-08 Score=79.81 Aligned_cols=38 Identities=42% Similarity=0.820 Sum_probs=36.4
Q ss_pred eEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcc
Q 021802 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (307)
Q Consensus 250 ~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~ 287 (307)
+++++.|+||++|.||+.++++|++.+|.++|+++.|.
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~d~~~v~v~~~~ 39 (129)
T 1coz_A 2 KKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDE 39 (129)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHH
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHHhCCCeEEEEECCH
Confidence 67999999999999999999999999999999999986
No 45
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=98.51 E-value=1.2e-06 Score=85.42 Aligned_cols=133 Identities=17% Similarity=0.096 Sum_probs=86.3
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHHc-cCc---cEEEE-cCCCc
Q 021802 53 RVYMDGCFDMMHYGHCNALRQARALG--DQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAV-KWV---DEVIS-DAPYA 125 (307)
Q Consensus 53 ~V~~~G~FD~lH~GH~~lL~qAk~~g--d~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~~-k~V---D~Vv~-~~py~ 125 (307)
+|++.|+||++|.||..++++|.+.. |.|++-..-.+ .| +--.+.+.|+++++.+ +.. +.+++ ..|+.
T Consensus 194 ~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g~----~K-~~di~~~~R~~~~~~~~~~~~p~~~v~l~~~p~~ 268 (396)
T 1jhd_A 194 KVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGK----LK-KGDIPAPVRDAAIRTMAEVYFPPNTVMVTGYGFD 268 (396)
T ss_dssp SEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECC----CC-TTCCCHHHHHHHHHHHHHHHSCTTCEEEEEEECC
T ss_pred eEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCCC----CC-CCCCCHHHHHHHHHHHHHhcCCCcceEEEechHH
Confidence 48889999999999999999999986 77664333222 23 4568899999998873 221 22222 12222
Q ss_pred -----ccHHHHHHHH-HhcCccEEEEcCCCC---cCCCCCchHHHHHhC-------CEEEEcCCC---------------
Q 021802 126 -----ITKDFMKKLF-DEYNIDYIIHGDDPC---VLPDGTDAYELAKKA-------GRYKQIKRT--------------- 174 (307)
Q Consensus 126 -----~t~dfle~ll-~~l~~d~VV~GdD~~---fg~~g~d~y~~lk~~-------g~v~vv~rt--------------- 174 (307)
.++..+..++ +.++|.+.++|.|.. -.+++.+..++++.. .++..+++.
T Consensus 269 m~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~il~~~~~~~~l~i~iv~~~~~~Y~~~~~~~~~~~~~ 348 (396)
T 1jhd_A 269 MLYAGPREAVLHAYFRQNMGATHFIIGRDHAGVGDYYGAFDAQTIFDDEVPEGAMEIEIFRADHTAYSKKLNKIVMMRDV 348 (396)
T ss_dssp CCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCTTCSCTTHHHHHHHHTSCTTSCSCEEEECCCEEEETTTTEEEEGGGC
T ss_pred hhcCCchHHHHHHHHHHcCCCcEEEECCCCCCccccCCcchHHHHHHhcccccccceeEEecccceecCCCCeEEEcccc
Confidence 1233344433 458999999999984 234555555666641 344444430
Q ss_pred --------CCCCHHHHHHHHHhhh
Q 021802 175 --------EGVSSTDIVGRMLLCV 190 (307)
Q Consensus 175 --------~~VSST~Ir~rIl~~~ 190 (307)
-.||||+||+++.+..
T Consensus 349 p~~~~~~~~~ISgT~IR~~L~~G~ 372 (396)
T 1jhd_A 349 PDHTKEDFVLLSGTKVREMLGQGI 372 (396)
T ss_dssp TTCCGGGEECCCHHHHHHHHHTTC
T ss_pred CcccCCCccccCHHHHHHHHHCCC
Confidence 1489999999987663
No 46
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=98.49 E-value=2.3e-06 Score=82.14 Aligned_cols=146 Identities=14% Similarity=0.123 Sum_probs=91.7
Q ss_pred hHHhHhhhcCCCCeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHHc-cCc--
Q 021802 39 DRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAV-KWV-- 115 (307)
Q Consensus 39 ~~~~~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~~-k~V-- 115 (307)
.++...+++.+-. +|++.|+||++|.||..+.++|.+..|.+++-..-.+ .| +--.+.+.|+++++.+ +..
T Consensus 144 ~e~r~~f~~~gw~-~VvafqTrNPiHrgH~~l~~~ale~~d~vll~P~~g~----~K-~~d~~~~~R~~~~~~~i~~~~p 217 (349)
T 1v47_A 144 EEVRAFFRQRGWR-KVVAFQTRNAPHRAHEYLIRLGLELADGVLVHPILGA----KK-PDDFPTEVIVEAYQALIRDFLP 217 (349)
T ss_dssp HHHHHHHHHTTCC-SEEEEEESSCCCHHHHHHHHHHHHHSSEEEEEEBCSC----CC-TTSCCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhcCCC-eEEEeecCCCCchHHHHHHHHHHHhCCcEEEEECCCC----CC-CCCCCHHHHHHHHHHHHhhcCC
Confidence 3344444444444 4888999999999999999999999888776444332 23 4568899999998873 222
Q ss_pred -cEEEE-cCCCcc-----cHHHHHHHH-HhcCccEEEEcCCCC---cCCCCCchHHHHHhC----CEEEEcCC-------
Q 021802 116 -DEVIS-DAPYAI-----TKDFMKKLF-DEYNIDYIIHGDDPC---VLPDGTDAYELAKKA----GRYKQIKR------- 173 (307)
Q Consensus 116 -D~Vv~-~~py~~-----t~dfle~ll-~~l~~d~VV~GdD~~---fg~~g~d~y~~lk~~----g~v~vv~r------- 173 (307)
+.+++ ..|+.. ++..+..++ +.++|.+.++|.|.. -.+++.+..++++.. .++..+++
T Consensus 218 ~~~~~l~~~p~~m~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~i~~~~~~l~i~~v~~~~~~Y~~~~ 297 (349)
T 1v47_A 218 QERVAFFGLATPMRYAGPKEAVFHALVRKNFGATHFLVGRDHAGVGDFYDPYAAHRIFDRLPPLGIEIVKVGAVFHCPLC 297 (349)
T ss_dssp GGGEEECCBCSCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCSTTCSCTTHHHHGGGGSCCCSSEEEECCCEEEETTT
T ss_pred CcceEEEechHHhhcCCcHHHHHHHHHHHcCCCcEEEECcCCCCcccccCcccHHHHHHhhhhcCceEEeccccEEcccC
Confidence 33433 133322 234455544 448999999999975 223444444444443 13333222
Q ss_pred ----------------CCCCCHHHHHHHHHhhh
Q 021802 174 ----------------TEGVSSTDIVGRMLLCV 190 (307)
Q Consensus 174 ----------------t~~VSST~Ir~rIl~~~ 190 (307)
.-.||+|+||+++.+..
T Consensus 298 ~~~~~~~~~p~~~~~~~~~ISgT~iR~~L~~G~ 330 (349)
T 1v47_A 298 GGIASERTCPEGHREKRTAISMTKVRALLREGK 330 (349)
T ss_dssp TEEEETTTSCGGGGGGCEECCHHHHHHHHHTTC
T ss_pred CceEEccccCccCCCcccccCHHHHHHHHHCcC
Confidence 01489999999987653
No 47
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=98.49 E-value=1e-07 Score=83.46 Aligned_cols=42 Identities=29% Similarity=0.338 Sum_probs=37.6
Q ss_pred CCCCeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcc
Q 021802 246 GPDARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (307)
Q Consensus 246 ~~~~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~ 287 (307)
.+++++++..|+||++|.||+.++++|++++|+|+|++..+.
T Consensus 18 ~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~D~Viv~v~~np 59 (177)
T 3nbk_A 18 GSHMTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNP 59 (177)
T ss_dssp --CCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCT
T ss_pred CCCCEEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC
Confidence 345689999999999999999999999999999999999774
No 48
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=98.46 E-value=6.3e-08 Score=82.12 Aligned_cols=48 Identities=25% Similarity=0.559 Sum_probs=40.2
Q ss_pred EEEEeCcccccCHHHHHHHHHHHhCC-CEEEEEEeCcccccc-cCCCccc
Q 021802 251 IIYIDGAFDLFHAGHVEILRIARGLG-DFLLVGIHNDQTVRL-KNPSVSF 298 (307)
Q Consensus 251 ~v~~~G~FDl~H~GHi~~L~~a~~~g-~~liVgv~~D~~v~~-~~~~~~~ 298 (307)
.+++.|+||++|.||+.++++|++++ |.|+|++++|...++ .++..|+
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~~~~~k~~~~~~~~ 51 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARARIRSVLPF 51 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHSCCCSCH
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCCccccccCCCCCCH
Confidence 37899999999999999999999987 899999999987633 2455553
No 49
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=98.44 E-value=2.1e-07 Score=80.45 Aligned_cols=39 Identities=28% Similarity=0.377 Sum_probs=36.1
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~ 287 (307)
.-++++.|+||++|.||+.++++|++++|+|+|+++++.
T Consensus 12 ~~i~i~~GsFdP~H~GHl~l~~~A~~~~D~viv~v~~~~ 50 (173)
T 1vlh_A 12 HMKAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENP 50 (173)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCT
T ss_pred ceEEEEEEEECcCcHHHHHHHHHHHHHCCEEEEEEeCCC
Confidence 357999999999999999999999999999999999974
No 50
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=98.42 E-value=2.1e-07 Score=80.82 Aligned_cols=39 Identities=23% Similarity=0.499 Sum_probs=35.2
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~ 287 (307)
+++++++|+||++|.||+.++++|++.+|+|+|++..+.
T Consensus 2 m~i~i~~GsFDPiH~GHl~i~~~a~~~~D~viv~v~~~~ 40 (171)
T 3nd5_A 2 RKIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINT 40 (171)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEEC--
T ss_pred CeEEEEEEEccccCHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 378999999999999999999999999999999998764
No 51
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=98.40 E-value=2.4e-07 Score=81.54 Aligned_cols=39 Identities=28% Similarity=0.514 Sum_probs=37.0
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~ 287 (307)
++++++.|+||++|.||+.++++|++.+|+|+|++.+|.
T Consensus 22 mki~v~~GsFDpiH~GHl~li~~A~~~~d~viv~v~~~p 60 (187)
T 3k9w_A 22 MVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSR 60 (187)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECCG
T ss_pred cEEEEEEEeCCcCcHHHHHHHHHHHHHCCcEEEEEecCC
Confidence 589999999999999999999999999999999999874
No 52
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=98.38 E-value=2.4e-07 Score=80.18 Aligned_cols=39 Identities=26% Similarity=0.369 Sum_probs=35.6
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~ 287 (307)
++++++.|+||++|.||+.++++|++.+|.|+|+++.+.
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~d~viv~v~~~p 41 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNS 41 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGSSEEEEEECC--
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhCCEEEEEEcCCC
Confidence 579999999999999999999999999999999999764
No 53
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=98.20 E-value=1.4e-06 Score=73.04 Aligned_cols=39 Identities=23% Similarity=0.422 Sum_probs=35.9
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~ 287 (307)
++++++.|+||++|.||+.++++|++.+|.+++.++.|.
T Consensus 1 ~~i~i~~GsFDpvH~GH~~l~~~a~~~~d~v~v~~~~~p 39 (158)
T 1qjc_A 1 QKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASP 39 (158)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEESCC
T ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHhCCEEEEEECCCC
Confidence 468999999999999999999999999999999999874
No 54
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=98.12 E-value=2e-06 Score=81.70 Aligned_cols=41 Identities=27% Similarity=0.269 Sum_probs=38.4
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcccc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTV 289 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~~v 289 (307)
++++++.|+||++|.||+.++++|++.+|+|+|++.++..-
T Consensus 2 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~v~v~~~~~~~~ 42 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVR 42 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHH
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEECCCCcc
Confidence 57899999999999999999999999999999999999764
No 55
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.09 E-value=1.9e-06 Score=80.69 Aligned_cols=41 Identities=24% Similarity=0.298 Sum_probs=37.6
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcccc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQTV 289 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~~v 289 (307)
++++++.|+||++|.||+.++++|++.+|.|+|+|.++..-
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~~~~~v~~~~~~ 47 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNT 47 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSEEEEEEEEEEESCC
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhCCcEEEEECCCCCC
Confidence 47899999999999999999999999999999999987643
No 56
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=97.99 E-value=5.5e-06 Score=71.54 Aligned_cols=37 Identities=22% Similarity=0.315 Sum_probs=33.9
Q ss_pred eEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCc
Q 021802 250 RIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND 286 (307)
Q Consensus 250 ~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D 286 (307)
+++++.|+||.+|.||+.++++|++.+|.++|++.++
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~~d~v~v~v~~~ 40 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEEVDELIICIGSA 40 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECST
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHhCCeeEEEECCC
Confidence 5789999999999999999999999999999999444
No 57
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=97.96 E-value=5.7e-06 Score=70.36 Aligned_cols=38 Identities=26% Similarity=0.422 Sum_probs=34.8
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND 286 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D 286 (307)
++++++.|+||.+|.||+.++++|++.+|.++|.+..+
T Consensus 2 ~~i~i~~GsFDpvH~GH~~li~~a~~~~d~v~v~~~~~ 39 (169)
T 1o6b_A 2 ASIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNN 39 (169)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCC
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHhCCEEEEEECCC
Confidence 36899999999999999999999999999999988865
No 58
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=97.94 E-value=7.8e-06 Score=69.77 Aligned_cols=36 Identities=31% Similarity=0.550 Sum_probs=33.1
Q ss_pred EEEEeCcccccCHHHHHHHHHHHhCCCEEEEEE-eCc
Q 021802 251 IIYIDGAFDLFHAGHVEILRIARGLGDFLLVGI-HND 286 (307)
Q Consensus 251 ~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv-~~D 286 (307)
++++.|+||.+|.||+.++++|++.+|.++|++ +.+
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~d~v~v~v~~~~ 38 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQ 38 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTT
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhCCeEEEEEcCCC
Confidence 588999999999999999999999999999999 544
No 59
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=97.87 E-value=7e-06 Score=70.72 Aligned_cols=41 Identities=22% Similarity=0.115 Sum_probs=35.5
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCC--CEEEEEEeCcccc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLG--DFLLVGIHNDQTV 289 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g--~~liVgv~~D~~v 289 (307)
++++++.|+||.+|.||+.++++|++.+ |.+++.++.+...
T Consensus 2 ~~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~~ 44 (189)
T 2qtr_A 2 RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPH 44 (189)
T ss_dssp CEEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCTT
T ss_pred CeEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCCC
Confidence 3789999999999999999999999887 9999999977633
No 60
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=97.87 E-value=1.1e-05 Score=67.61 Aligned_cols=36 Identities=22% Similarity=0.456 Sum_probs=33.0
Q ss_pred EEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcc
Q 021802 252 IYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (307)
Q Consensus 252 v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~ 287 (307)
+++.|+||.+|.||+.++++|++.+|.++|.++.+.
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~d~v~v~~~~~p 38 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLENP 38 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECC-
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC
Confidence 788999999999999999999999999999998664
No 61
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=97.81 E-value=1.5e-05 Score=69.33 Aligned_cols=39 Identities=21% Similarity=0.163 Sum_probs=35.3
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCC--CEEEEEEeCcc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLG--DFLLVGIHNDQ 287 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g--~~liVgv~~D~ 287 (307)
++++++.|+||.+|.||+.++++|++.+ |.++++++.+.
T Consensus 7 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~ 47 (194)
T 1kam_A 7 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIP 47 (194)
T ss_dssp CEEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC
T ss_pred cEEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 3789999999999999999999999887 89999998775
No 62
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=97.78 E-value=1.5e-05 Score=74.30 Aligned_cols=42 Identities=26% Similarity=0.444 Sum_probs=36.7
Q ss_pred CCeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEE--eCccccc
Q 021802 248 DARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGI--HNDQTVR 290 (307)
Q Consensus 248 ~~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv--~~D~~v~ 290 (307)
+++++++ |+||.+|.||+.++++|++.+|.+||++ |+++...
T Consensus 21 g~~V~~v-gtfdgLH~GH~sLI~~A~~~ad~vVVSffvnP~qf~~ 64 (280)
T 2ejc_A 21 KKTIGFV-PTMGYLHEGHLSLVRRARAENDVVVVSIFVNPTQFGP 64 (280)
T ss_dssp TCCEEEE-EECSCCCHHHHHHHHHHHHHSSEEEEEECCCGGGCCT
T ss_pred CCEEEEE-cCCccccHHHHHHHHHHHHhCCEEEEEEeCChHHhcC
Confidence 4678888 8999999999999999999999999999 5555543
No 63
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=97.77 E-value=2e-05 Score=71.57 Aligned_cols=39 Identities=26% Similarity=0.195 Sum_probs=36.3
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCC--CEEEEEEeCcc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLG--DFLLVGIHNDQ 287 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g--~~liVgv~~D~ 287 (307)
++++++.|+||++|.||+.++++|++.+ |.++|+++.|.
T Consensus 23 ~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~ 63 (242)
T 1yum_A 23 KRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARP 63 (242)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCC
T ss_pred ceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCC
Confidence 6789999999999999999999999887 99999999885
No 64
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=97.76 E-value=1.3e-05 Score=74.37 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=36.8
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCccc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQT 288 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~~ 288 (307)
++++++.|+||.+|.||+.++++|++.+|.++|+|.++..
T Consensus 7 ~~~~i~~G~FdP~H~GH~~li~~a~~~~d~v~v~v~~~~~ 46 (341)
T 2qjo_A 7 YQYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRV 46 (341)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHEEEEEEEEEEETC
T ss_pred eeEEEEEEEeCCCCHHHHHHHHHHHHhCCeEEEEECCccc
Confidence 4789999999999999999999999999999999998853
No 65
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=97.75 E-value=2.1e-05 Score=68.22 Aligned_cols=40 Identities=15% Similarity=0.123 Sum_probs=34.7
Q ss_pred eEEEEeCcccccCHHHHHHHHHHHhCC--CEEEEEEeCcccc
Q 021802 250 RIIYIDGAFDLFHAGHVEILRIARGLG--DFLLVGIHNDQTV 289 (307)
Q Consensus 250 ~~v~~~G~FDl~H~GHi~~L~~a~~~g--~~liVgv~~D~~v 289 (307)
+++++.|+||.+|.||+.++++|++.. |.+++..+.+...
T Consensus 3 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~~ 44 (189)
T 2h29_A 3 KIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPL 44 (189)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCTT
T ss_pred eEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCCC
Confidence 688999999999999999999999875 8888877777543
No 66
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=97.69 E-value=9.6e-05 Score=68.89 Aligned_cols=67 Identities=21% Similarity=0.248 Sum_probs=56.2
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhh-cCC--CCCCCHHHHHHHHHHccCccEEEE
Q 021802 53 RVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIA-NKG--PPVTPLHERMIMVNAVKWVDEVIS 120 (307)
Q Consensus 53 ~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~-~Kg--~pi~s~eER~~ll~~~k~VD~Vv~ 120 (307)
++-...+..++|.||+.|+++|++.+|.++|.+..+|.-.. ... +...+.+++.++++++ +||.++.
T Consensus 23 ~ig~VPTMG~LH~GH~sLi~~A~~~~d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~-GvD~vF~ 92 (283)
T 3uk2_A 23 RTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKE-NVYVLFA 92 (283)
T ss_dssp SCEEEEECSSCCHHHHHHHHHHHTTCSSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTT-TCSEEEC
T ss_pred eEEEECCCCcccHHHHHHHHHHHHhCCEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHc-CCCEEEe
Confidence 47788899999999999999999999999999988875321 112 5788999999999998 9998876
No 67
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=97.51 E-value=4.9e-05 Score=65.99 Aligned_cols=37 Identities=19% Similarity=0.250 Sum_probs=32.7
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND 286 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D 286 (307)
+++++..|+||++|.||+.+++ |.+..|.|++++..+
T Consensus 2 ~~igi~gGsFdPih~GHl~i~~-a~~~~d~v~~~p~~~ 38 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIE-SLSHFDLVLLEPSIA 38 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHT-TCTTSSEEEEEECC-
T ss_pred cEEEEEEeccchhhHHHHHHHH-HHHHCCEEEEEECCC
Confidence 4789999999999999999998 776679999999875
No 68
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=97.45 E-value=0.00064 Score=64.11 Aligned_cols=75 Identities=23% Similarity=0.261 Sum_probs=56.8
Q ss_pred HhHhhhcCCCCeEEE--EecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhh-hhcCC--CCCCCHHHHHHHHHHccCc
Q 021802 41 WLQWTRKKKKPVRVY--MDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEI-IANKG--PPVTPLHERMIMVNAVKWV 115 (307)
Q Consensus 41 ~~~~~~~~~~~~~V~--~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i-~~~Kg--~pi~s~eER~~ll~~~k~V 115 (307)
+.+.++..++++ ++ +.| .+|.||+.|+++|++.+|.++|.|.-+|.= ..+.. ...-+.++..+++++. +|
T Consensus 34 ~~~~~r~~g~~I-gfVPTMG---~LH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-Gv 108 (314)
T 3inn_A 34 ALAPARQQGKKI-GFVPTMG---YLHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDA-QV 108 (314)
T ss_dssp HHHHHHHTTCCE-EEEEECS---SCCHHHHHHHHHHHHHCSEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHHHT-TC
T ss_pred HHHHHHHcCCeE-EEEcCCC---ccCHHHHHHHHHHHHhCCEEEEEECCChhhcCCCccccccCCCHHHHHHHHHhC-CC
Confidence 333455555543 66 888 599999999999999999999999887742 11122 4567899999999998 99
Q ss_pred cEEEE
Q 021802 116 DEVIS 120 (307)
Q Consensus 116 D~Vv~ 120 (307)
|.++.
T Consensus 109 D~vF~ 113 (314)
T 3inn_A 109 DYLFA 113 (314)
T ss_dssp SEEEC
T ss_pred CEEEC
Confidence 98765
No 69
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=97.43 E-value=5.7e-05 Score=66.69 Aligned_cols=40 Identities=20% Similarity=0.247 Sum_probs=34.8
Q ss_pred eE-EEEeCcccccCHHHHHHHHHHHhCC--CEEEEEEeCcccc
Q 021802 250 RI-IYIDGAFDLFHAGHVEILRIARGLG--DFLLVGIHNDQTV 289 (307)
Q Consensus 250 ~~-v~~~G~FDl~H~GHi~~L~~a~~~g--~~liVgv~~D~~v 289 (307)
++ ++..|+||.+|.||+.++++|++.+ |.+++.++.+...
T Consensus 3 ~i~~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~~ 45 (213)
T 1k4m_A 3 SLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPH 45 (213)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCTT
T ss_pred eEEEEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCC
Confidence 45 8899999999999999999999876 8899999877543
No 70
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=97.22 E-value=0.00078 Score=62.85 Aligned_cols=75 Identities=19% Similarity=0.203 Sum_probs=53.9
Q ss_pred HhHhhhcCCCCeEEE--EecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhh-hcCC--CCCCCHHHHHHHHHHccCc
Q 021802 41 WLQWTRKKKKPVRVY--MDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEII-ANKG--PPVTPLHERMIMVNAVKWV 115 (307)
Q Consensus 41 ~~~~~~~~~~~~~V~--~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~-~~Kg--~pi~s~eER~~ll~~~k~V 115 (307)
+.+.++..++++ ++ +.|+ +|-||+.|+++|++.+|.++|+|.-+|.=. .+.. ...-+.++=.+++++. +|
T Consensus 16 ~~~~~r~~g~~I-gfVPTMG~---LH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~~l~~~-gv 90 (287)
T 3q12_A 16 QIRRWRQEGKRI-ALVPTMGN---LHEGHMTLVDEAKTRADVVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKLTRH-GA 90 (287)
T ss_dssp HHHHHHHTTCCE-EEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCSSHHHHHHSCCCHHHHHHHHHHH-TC
T ss_pred HHHHHHHcCCeE-EEEcCCCc---ccHHHHHHHHHHHHhCCEEEEEeccCcccCCCcchhhcCCCCHHHHHHHHHHC-CC
Confidence 334455555554 66 8897 999999999999999999999987776311 0000 2345677778888887 99
Q ss_pred cEEEE
Q 021802 116 DEVIS 120 (307)
Q Consensus 116 D~Vv~ 120 (307)
|.++.
T Consensus 91 d~vF~ 95 (287)
T 3q12_A 91 DLVFA 95 (287)
T ss_dssp SEEEC
T ss_pred CEEEC
Confidence 97765
No 71
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=96.82 E-value=0.00041 Score=63.04 Aligned_cols=36 Identities=14% Similarity=0.278 Sum_probs=29.5
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCC----EEEEEEe
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGD----FLLVGIH 284 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~----~liVgv~ 284 (307)
.++++..|+||.+|.||+.++++|++..+ +.+||+.
T Consensus 6 ~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~ 45 (252)
T 1nup_A 6 PVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGI 45 (252)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred ceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEE
Confidence 57889999999999999999999986643 3676544
No 72
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=96.70 E-value=0.00051 Score=63.61 Aligned_cols=37 Identities=16% Similarity=0.372 Sum_probs=30.0
Q ss_pred CCCeEEEEeCcccccCHHHHHHHHHHHhCCC-----EEEEEE
Q 021802 247 PDARIIYIDGAFDLFHAGHVEILRIARGLGD-----FLLVGI 283 (307)
Q Consensus 247 ~~~~~v~~~G~FDl~H~GHi~~L~~a~~~g~-----~liVgv 283 (307)
+..++++..|+||.+|.||+.++++|++..+ .++|++
T Consensus 6 ~~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~ 47 (279)
T 1kqn_A 6 KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGI 47 (279)
T ss_dssp CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEE
T ss_pred CCceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEE
Confidence 3468899999999999999999999986642 366654
No 73
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=96.69 E-value=0.0075 Score=56.16 Aligned_cols=74 Identities=19% Similarity=0.236 Sum_probs=52.1
Q ss_pred hHhhhcCCCCe-EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhh-hhcCC--CCCCCHHHHHHHHHHccCccE
Q 021802 42 LQWTRKKKKPV-RVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEI-IANKG--PPVTPLHERMIMVNAVKWVDE 117 (307)
Q Consensus 42 ~~~~~~~~~~~-~V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i-~~~Kg--~pi~s~eER~~ll~~~k~VD~ 117 (307)
.+.++..++.+ -|=+.|+ +|-||+.|+++|++ +|.++|.|.-+|.= ..+.. ...-+.++=.+++++. +||.
T Consensus 17 ~~~~~~~g~~Ig~VPTMGa---LH~GHlsLv~~Ar~-~d~VVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-gvD~ 91 (285)
T 3mxt_A 17 VKDWKSHQLSIGYVPTMGF---LHDGHLSLVKHAKT-QDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDN-GVDM 91 (285)
T ss_dssp HHHHHHTTCCEEEEEECSS---CCHHHHHHHHHHTT-SSEEEEEECCCGGGCCTTSCTTTSCCCHHHHHHHHHHT-TCSE
T ss_pred HHHHHHcCCeEEEEcCCCc---ccHHHHHHHHHHHh-CCEEEEEeccCccccCCchhhhcCCCCHHHHHHHHHHC-CCCE
Confidence 33444555543 2337775 99999999999999 99999998777631 11111 3456678888889997 9997
Q ss_pred EEE
Q 021802 118 VIS 120 (307)
Q Consensus 118 Vv~ 120 (307)
++.
T Consensus 92 vF~ 94 (285)
T 3mxt_A 92 VFI 94 (285)
T ss_dssp EEC
T ss_pred EEC
Confidence 765
No 74
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=96.59 E-value=0.11 Score=50.49 Aligned_cols=105 Identities=14% Similarity=0.119 Sum_probs=64.0
Q ss_pred hHHhHhhhcCCCCeEEEEecccCcCCHHHHHHHH-HHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHHcc---C
Q 021802 39 DRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNALR-QARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVK---W 114 (307)
Q Consensus 39 ~~~~~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~-qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~~k---~ 114 (307)
.++...+++.+.. +|++..+.+++|.||..++. .|.+.++.|++ |+ .+-..| +-=.+.+-|++..+.+. -
T Consensus 176 ~e~R~~f~~~gw~-~VvafqtrNP~HraH~e~~~r~a~e~~~~lll--hP--lvG~tK-~~Dip~~vR~~~~~~~l~~yp 249 (395)
T 1r6x_A 176 AQLRLEFQSRQWD-RVVAFQTRNPMHRAHRELTVRAAREANAKVLI--HP--VVGLTK-PGDIDHHTRVRVYQEIIKRYP 249 (395)
T ss_dssp HHHHHHHHHTTCC-CEEEECCSSCCCHHHHHHHHHHHHHTTCEEEE--CC--BCSBCC-TTCCCHHHHHHHHHHHGGGSS
T ss_pred HHHHHHHHhcCCC-cEEEeccCCCcchhhHHHHHHHHHHcCCcEEE--EE--CCCCCC-CCCCCHHHHHHHHHHHHHhCC
Confidence 3344444444444 48899999999999966654 55555665553 33 121122 33478899999887743 1
Q ss_pred ccEEEEcCCCcc-------cHHHHHHHH-HhcCccEEEEcCCCC
Q 021802 115 VDEVISDAPYAI-------TKDFMKKLF-DEYNIDYIIHGDDPC 150 (307)
Q Consensus 115 VD~Vv~~~py~~-------t~dfle~ll-~~l~~d~VV~GdD~~ 150 (307)
-+.+++ .+|.. .+.-+..++ +.|+|.+.++|-|+.
T Consensus 250 ~~~v~l-~~~p~~mryAGPrEai~HAiiRkN~GcthfIVGRDhA 292 (395)
T 1r6x_A 250 NGIAFL-SLLPLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHA 292 (395)
T ss_dssp TTCEEE-CCBCCBCCCCHHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred CccEEE-EecchhhhhcCcHHHHHHHHHHHHcCCceEEECCCCC
Confidence 244554 33321 234445544 459999999999986
No 75
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=96.52 E-value=0.0012 Score=62.83 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=33.4
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCE---EEEEEeCccc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDF---LLVGIHNDQT 288 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~---liVgv~~D~~ 288 (307)
...|++-|+||.+|.||..+|++|++.++. ..|.++-|..
T Consensus 15 ~~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdph 57 (338)
T 2x0k_A 15 DNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPH 57 (338)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSC
T ss_pred CCeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCC
Confidence 357899999999999999999999987654 5777877763
No 76
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=96.31 E-value=0.0043 Score=57.85 Aligned_cols=36 Identities=28% Similarity=0.472 Sum_probs=31.9
Q ss_pred CCeEEE--EeCcccccCHHHHHHHHHHHhCCCEEEEEEeCc
Q 021802 248 DARIIY--IDGAFDLFHAGHVEILRIARGLGDFLLVGIHND 286 (307)
Q Consensus 248 ~~~~v~--~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D 286 (307)
+++|++ +-|+ +|.||+.++++||+.||.+||+|.-+
T Consensus 24 g~~IgfVPTMG~---LH~GHlsLv~~Ar~~~d~vVVSIFVN 61 (287)
T 3q12_A 24 GKRIALVPTMGN---LHEGHMTLVDEAKTRADVVVVTIFVN 61 (287)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCC
T ss_pred CCeEEEEcCCCc---ccHHHHHHHHHHHHhCCEEEEEeccC
Confidence 568888 6686 99999999999999999999998755
No 77
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=96.13 E-value=0.25 Score=49.33 Aligned_cols=106 Identities=18% Similarity=0.197 Sum_probs=64.6
Q ss_pred hHHhHhhhcCCCCeEEEEecccCcCCHHHHHHH-HHHHHcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHHcc--C-
Q 021802 39 DRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNAL-RQARALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVK--W- 114 (307)
Q Consensus 39 ~~~~~~~~~~~~~~~V~~~G~FD~lH~GH~~lL-~qAk~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~~k--~- 114 (307)
.++...+++.+.. +|++..+++++|.||..++ +.|.+.++.|++-..--+ .| +-=.+.+-|++..+.+. +
T Consensus 177 ~e~r~~f~~~gw~-~v~afqtrnP~HraH~e~~~~~a~e~~~~lll~pl~g~----~k-~~di~~~~r~~~~~~~~~~yp 250 (511)
T 1g8f_A 177 AQLRLEFQSRQWD-RVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVVGL----TK-PGDIDHHTRVRVYQEIIKRYP 250 (511)
T ss_dssp HHHHHHHHHTTCC-CEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEBCSB----CS-TTCCCHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHHHcCCC-cEEEEecCCCCchHHHHHHHHHHHHcCCcEEEEECCCC----CC-CCCCCHHHHHHHHHHHHHhCC
Confidence 3344444444444 4888999999999996555 555565776654222111 22 23478899999888753 1
Q ss_pred ccEEEE-cCCCcc-----cHHHHHHHH-HhcCccEEEEcCCCC
Q 021802 115 VDEVIS-DAPYAI-----TKDFMKKLF-DEYNIDYIIHGDDPC 150 (307)
Q Consensus 115 VD~Vv~-~~py~~-----t~dfle~ll-~~l~~d~VV~GdD~~ 150 (307)
-+.+++ ..|+.. .+.-+..++ +.|+|.+.++|-|+.
T Consensus 251 ~~~~~l~~~p~~m~yaGprea~~hai~r~n~G~th~IvGrdhA 293 (511)
T 1g8f_A 251 NGIAFLSLLPLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHA 293 (511)
T ss_dssp TTSEEECCBCCBCCCCHHHHHHHHHHHHHHTTCSEEECCTTTT
T ss_pred cccEEEEecchhhhccCcHHHHHHHHHHHhCCCceEEeCCCCC
Confidence 234443 233321 234445544 459999999999986
No 78
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=96.09 E-value=0.0032 Score=59.30 Aligned_cols=39 Identities=26% Similarity=0.385 Sum_probs=31.2
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHhCCCEE---EEEEeCcc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARGLGDFL---LVGIHNDQ 287 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~l---iVgv~~D~ 287 (307)
...|++-|.||-+|.||..+|++|++.++.+ .|.++-|.
T Consensus 20 ~~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdp 61 (308)
T 3op1_A 20 SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNE 61 (308)
T ss_dssp SCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESS
T ss_pred CCeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 4679999999999999999999999876542 45555554
No 79
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=95.40 E-value=0.018 Score=55.31 Aligned_cols=36 Identities=14% Similarity=0.299 Sum_probs=29.6
Q ss_pred CCeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeC
Q 021802 248 DARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHN 285 (307)
Q Consensus 248 ~~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~ 285 (307)
++++|.+-|.||.||.||..++++|++ .+ +++.|-+
T Consensus 51 ~~~~v~~lG~FDg~H~GHq~lI~~a~~-~~-~~~~Vms 86 (357)
T 3gmi_A 51 KDKIVCDFTEYNPLHKGHKYALEKGKE-HG-IFISVLP 86 (357)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHHHT-SS-EEEEEEC
T ss_pred CCCEEEEEEecCccCHHHHHHHHHHHH-cC-CeEEEEc
Confidence 357899999999999999999999999 55 4444444
No 80
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=95.37 E-value=0.05 Score=50.07 Aligned_cols=66 Identities=14% Similarity=0.283 Sum_probs=47.2
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCCeEEEEEeCChhhhh-cCC--CCCCCHHHHHHHHHHccCccEEEE
Q 021802 54 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIA-NKG--PPVTPLHERMIMVNAVKWVDEVIS 120 (307)
Q Consensus 54 V~~~G~FD~lH~GH~~lL~qAk~~gd~LiVgV~sD~~i~~-~Kg--~pi~s~eER~~ll~~~k~VD~Vv~ 120 (307)
+-..-+-=.+|-||+.|+++|++.+|.++|.|.-+|.=.. +.. ...-+.++=.+++++. +||.++.
T Consensus 26 ig~VPTMGaLH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-gvD~vF~ 94 (264)
T 3n8h_A 26 IGFVPTMGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQTYPNQLQQDIQILASL-DVDVLFN 94 (264)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHCSEEEEEECCCGGGCSCHHHHHHSCCCHHHHHHHHHHT-TCSEEEC
T ss_pred EEEECCCcchhHHHHHHHHHHHHhCCEEEEEEccCcccCCCcchhhcCCCCHHHHHHHHHHC-CCCEEEC
Confidence 4444444579999999999999999999999877763110 000 2345677778888987 9997765
No 81
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=94.46 E-value=0.039 Score=51.34 Aligned_cols=35 Identities=29% Similarity=0.549 Sum_probs=29.9
Q ss_pred CCeEEEEe--CcccccCHHHHHHHHHHHhCCCEEEEEEeCc
Q 021802 248 DARIIYID--GAFDLFHAGHVEILRIARGLGDFLLVGIHND 286 (307)
Q Consensus 248 ~~~~v~~~--G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D 286 (307)
+++|++|+ |+ +|.||+.++++|++ +|.+||.|.-+
T Consensus 24 g~~Ig~VPTMGa---LH~GHlsLv~~Ar~-~d~VVVSIFVN 60 (285)
T 3mxt_A 24 QLSIGYVPTMGF---LHDGHLSLVKHAKT-QDKVIVSIFVN 60 (285)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHTT-SSEEEEEECCC
T ss_pred CCeEEEEcCCCc---ccHHHHHHHHHHHh-CCEEEEEeccC
Confidence 46777764 65 99999999999999 99999998754
No 82
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=94.22 E-value=0.045 Score=51.59 Aligned_cols=37 Identities=35% Similarity=0.512 Sum_probs=32.2
Q ss_pred CCeEEE--EeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcc
Q 021802 248 DARIIY--IDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (307)
Q Consensus 248 ~~~~v~--~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~ 287 (307)
+++|++ +-|. +|.||+.++++|++.+|.+||.|.-+.
T Consensus 42 g~~IgfVPTMG~---LH~GHlsLi~~A~~~~d~vVVSIFVNP 80 (314)
T 3inn_A 42 GKKIGFVPTMGY---LHKGHLELVRRARVENDVTLVSIFVNP 80 (314)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCG
T ss_pred CCeEEEEcCCCc---cCHHHHHHHHHHHHhCCEEEEEECCCh
Confidence 568888 5685 999999999999999999999997653
No 83
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=93.22 E-value=0.69 Score=46.34 Aligned_cols=104 Identities=16% Similarity=0.132 Sum_probs=64.7
Q ss_pred HhHhhhcCCCCeEEEEecccCcCCHHHHHHHHHHHH-cCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHHc----cCc
Q 021802 41 WLQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARA-LGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAV----KWV 115 (307)
Q Consensus 41 ~~~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qAk~-~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~~----k~V 115 (307)
+...+++.+.. +|++.=+++++|.||..++++|.+ .++.|+| ++- +-..| +.=.+.+-|++.++.+ ---
T Consensus 154 ~r~~~~~~gw~-~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv--~p~--~g~~k-~~di~~~~R~~~~~~~~~~~~p~ 227 (546)
T 2gks_A 154 VREEIKSLGLD-KIVAFQTRNPMHRVHEELTKRAMEKVGGGLLL--HPV--VGLTK-PGDVDVYTRMRIYKVLYEKYYDK 227 (546)
T ss_dssp HHHHHHHHTCS-CEEEECCSSCCCHHHHHHHHHHHHHHTSEEEE--CCB--CSBCC-TTSCCHHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHcCCC-cEEEEecCCCCcHHHHHHHHHHHHhcCCcEEE--EeC--cCCCC-CCCCCHHHHHHHHHHHHHhcCCC
Confidence 33334433334 488899999999999999999996 6787664 322 11112 2346889999988875 112
Q ss_pred cEEEE-cCCCc--c---cHHHHHHH-HHhcCccEEEEcCCCC
Q 021802 116 DEVIS-DAPYA--I---TKDFMKKL-FDEYNIDYIIHGDDPC 150 (307)
Q Consensus 116 D~Vv~-~~py~--~---t~dfle~l-l~~l~~d~VV~GdD~~ 150 (307)
+.+++ ..|+. + .+.-+..+ -+.++|...++|-|+.
T Consensus 228 ~~v~~~~~p~~m~~agprea~~ha~ir~n~G~th~ivgrdha 269 (546)
T 2gks_A 228 KKTILAFLPLAMRMAGPREALWHGIIRRNYGATHFIVGRDHA 269 (546)
T ss_dssp TTEEECBBCCBCCCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred CcEEEeecCchhhccCchHHHHHHHHHHhCCCCeEEECCCCC
Confidence 44444 12221 1 23333343 3569999999998875
No 84
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=92.77 E-value=0.14 Score=47.67 Aligned_cols=37 Identities=24% Similarity=0.462 Sum_probs=31.5
Q ss_pred CCeEEE--EeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcc
Q 021802 248 DARIIY--IDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (307)
Q Consensus 248 ~~~~v~--~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~ 287 (307)
+++|++ +-|. +|.||..++++|++.+|.+||.+....
T Consensus 22 g~~I~fVpTmG~---lH~GH~~LI~~a~~~a~~vVvsffvnP 60 (283)
T 3ag6_A 22 GTTIGFIPTMGA---LHDGHLTMVRESVSTNDITIVSVFVNP 60 (283)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCG
T ss_pred CCcEEEEECCcc---ccHHHHHHHHHHHHhCCEEEEEEeCCh
Confidence 456766 6776 999999999999999999999998764
No 85
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=92.16 E-value=0.081 Score=48.68 Aligned_cols=39 Identities=21% Similarity=0.521 Sum_probs=32.2
Q ss_pred CCCeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCc
Q 021802 247 PDARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHND 286 (307)
Q Consensus 247 ~~~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D 286 (307)
.+++|++|+ +---+|.||+.++++|++.+|.+||.|.-+
T Consensus 22 ~g~~ig~VP-TMGaLH~GHlsLv~~Ar~~~d~vVVSIFVN 60 (264)
T 3n8h_A 22 KQQKIGFVP-TMGALHNGHISLIKKAKSENDVVIVSIFVN 60 (264)
T ss_dssp TTSCEEEEE-ECSSCCHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred CCCcEEEEC-CCcchhHHHHHHHHHHHHhCCEEEEEEccC
Confidence 456788875 222589999999999999999999999754
No 86
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=92.01 E-value=0.15 Score=47.28 Aligned_cols=34 Identities=24% Similarity=0.456 Sum_probs=30.2
Q ss_pred EEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcc
Q 021802 251 IIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (307)
Q Consensus 251 ~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~ 287 (307)
.|.+-|. +|.||..++++|++.++.+||.+..+.
T Consensus 21 ~VpTmG~---lH~GH~~Li~~A~~~a~~vVvsff~nP 54 (276)
T 1v8f_A 21 FVPTMGY---LHRGHLALVERARRENPFVVVSVFVNP 54 (276)
T ss_dssp EEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCG
T ss_pred EEEeCCC---ccHHHHHHHHHHHHhCCEEEEEEECCH
Confidence 4556777 999999999999999999999999885
No 87
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=91.40 E-value=2.5 Score=42.45 Aligned_cols=106 Identities=8% Similarity=0.054 Sum_probs=62.5
Q ss_pred hHHhHhhhcCCCCeEEEEecccCcCCHHHHHHHHHHH-HcCCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHHcc--C-
Q 021802 39 DRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQAR-ALGDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVK--W- 114 (307)
Q Consensus 39 ~~~~~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qAk-~~gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~~k--~- 114 (307)
.++...+++.+.. +|++.=+-+++|.+|..++++|. +.++.|++ |+ .+-..| +-=.+.+-|++..+.+. +
T Consensus 152 ~e~r~~~~~~gw~-~v~afqtrnp~Hrah~~~~~~~~~~~~~~lll--~p--l~g~~k-~~d~~~~~r~~~~~~~~~~~p 225 (552)
T 3cr8_A 152 AELRALFVRRGWR-RIIAWQARQPMHRAQYEFCLKSAIENEANLLL--HP--QVGGDI-TEAPAYFGLVRSFLAIRDRFP 225 (552)
T ss_dssp HHHHHHHHHTTCC-SEEEECCSSCCCHHHHHHHHHHHHHTTCEEEE--CC--BCCCCT-TTCTTHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHHhcCCC-ceEEEecCCCCchHHHHHHHHHHHhcCCeEEE--Ee--ccCCCC-CCCCCHHHHHHHHHHHHHhCC
Confidence 3444445444444 38888999999999999999998 66775553 33 221112 34577889998877742 2
Q ss_pred ccEEEE-cCCCc-----ccHHHHHHHH-HhcCccEEEEcCCCC
Q 021802 115 VDEVIS-DAPYA-----ITKDFMKKLF-DEYNIDYIIHGDDPC 150 (307)
Q Consensus 115 VD~Vv~-~~py~-----~t~dfle~ll-~~l~~d~VV~GdD~~ 150 (307)
-+.+++ ..|+. ..+.-+..++ +.|+|...++|-|+.
T Consensus 226 ~~~~~l~~~p~~m~~agprea~~ha~~r~n~G~th~ivGrdha 268 (552)
T 3cr8_A 226 AATTQLSLLPAPPPEASGRALLLRAIVARNFGCSLLIAGGEHQ 268 (552)
T ss_dssp GGGEEECBBCSCCCCSCSHHHHHHHHHHHHHTCSEEEC-----
T ss_pred CccEEEeecchhhcccCcHHHHHHHHHHHhCCCCeeeeCCCCC
Confidence 244443 13332 1244444444 459999999999875
No 88
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=90.95 E-value=5.6 Score=40.63 Aligned_cols=104 Identities=19% Similarity=0.095 Sum_probs=64.9
Q ss_pred HHhHhhhcCCCCeEEEEecccCcCCHHHHHHHHHHHH-cCC------eEEEEEeCChhhhhcCCCCCCCHHHHHHHHHHc
Q 021802 40 RWLQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARA-LGD------QLVVGVVSDAEIIANKGPPVTPLHERMIMVNAV 112 (307)
Q Consensus 40 ~~~~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qAk~-~gd------~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~~ 112 (307)
++...+++.+.. +|++.=+-+++|.||..+++.|.+ .+| -|+ +|+ .+-..| +-=.+.+-|++..+.+
T Consensus 402 e~r~~f~~~gw~-~VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~ll--l~p--l~G~tk-~~di~~~~r~~~~~~~ 475 (630)
T 1x6v_B 402 ELKQKFKDMNAD-AVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLL--LHP--LGGWTK-DDDVPLMWRMKQHAAV 475 (630)
T ss_dssp HHHHHHHHTTCS-EEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEE--EEE--BCSCCC-TTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-eEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEE--EEe--CcCCCC-CCCCCHHHHHHHHHHH
Confidence 333334444444 588888999999999999999986 344 243 332 111112 3456888998877763
Q ss_pred c---Cc--cEEEEcCCCcc-------cHHHHHHHH-HhcCccEEEEcCCCC
Q 021802 113 K---WV--DEVISDAPYAI-------TKDFMKKLF-DEYNIDYIIHGDDPC 150 (307)
Q Consensus 113 k---~V--D~Vv~~~py~~-------t~dfle~ll-~~l~~d~VV~GdD~~ 150 (307)
- +. +.+++ .+|.. .+.-+..++ +.++|...++|-|+.
T Consensus 476 ~~~~y~p~~~~~l-~~~p~~mryaGPrEa~~hai~rkN~Gcth~IVGrdhA 525 (630)
T 1x6v_B 476 LEEGVLNPETTVV-AIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPA 525 (630)
T ss_dssp HHTTSSCGGGEEE-CCBCCCCCCCHHHHHHHHHHHHHHTTCSEEEECSSTT
T ss_pred HHcCCCCCcceEE-eeccchhhhcCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 2 12 55665 44321 234445544 459999999999986
No 89
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=90.83 E-value=0.25 Score=46.21 Aligned_cols=38 Identities=24% Similarity=0.556 Sum_probs=29.5
Q ss_pred CeEEEEeCcccccCHHHHHHHHHHHh-CCCEEEEEEeCcc
Q 021802 249 ARIIYIDGAFDLFHAGHVEILRIARG-LGDFLLVGIHNDQ 287 (307)
Q Consensus 249 ~~~v~~~G~FDl~H~GHi~~L~~a~~-~g~~liVgv~~D~ 287 (307)
++++++ .++.-+|.||..++++|++ .++.+||.+....
T Consensus 33 ~~vg~V-pTmG~LH~GH~sLI~~A~~~~a~~vVvSffvnP 71 (301)
T 3cov_A 33 RRVMLV-PTMGALHEGHLALVRAAKRVPGSVVVVSIFVNP 71 (301)
T ss_dssp CEEEEE-EECSCCCHHHHHHHHHHHTSTTEEEEEEECCCG
T ss_pred CcEEEE-ecCCcccHHHHHHHHHHHHhcCCEEEEEEcCCh
Confidence 354443 3444499999999999999 9999999998763
No 90
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=90.13 E-value=1.6 Score=43.89 Aligned_cols=106 Identities=14% Similarity=0.059 Sum_probs=65.2
Q ss_pred hHHhHhhhcCCCCeEEEEecccCcCCHHHHHHHHHHHHc-CCeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHHcc--C-
Q 021802 39 DRWLQWTRKKKKPVRVYMDGCFDMMHYGHCNALRQARAL-GDQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVK--W- 114 (307)
Q Consensus 39 ~~~~~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qAk~~-gd~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~~k--~- 114 (307)
.++...++..+.. +|++.=+++++|.||..++++|.+. ++.|+| ++ .+-..| +-=.+.+-|++.++.+. +
T Consensus 179 ~e~r~~~~~~gw~-~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv--~p--l~g~~k-~~di~~~~R~~~~~~~~~~~p 252 (573)
T 1m8p_A 179 AELRVHFDKLGWS-RVVAFQTRNPMHRAHRELTVRAARSRQANVLI--HP--VVGLTK-PGDIDHFTRVRAYQALLPRYP 252 (573)
T ss_dssp HHHHHHHHHTTCC-SEEEECCSSCCCHHHHHHHHHHHHHTTCEEEE--CC--BCCCCC-TTCHHHHHHHHHHHHHGGGSS
T ss_pred HHHHHHHHHcCCC-eEEEEeeCCCcchhhHHHHHHHHHhcCCcEEE--Ee--CCCCCC-CCCCCHHHHHHHHHHHHHhCC
Confidence 3344444444444 4788999999999999999999865 776664 32 111112 23367899999888852 1
Q ss_pred ccEEEEc-CCCc--c---cHHHHHH-HHHhcCccEEEEcCCCC
Q 021802 115 VDEVISD-APYA--I---TKDFMKK-LFDEYNIDYIIHGDDPC 150 (307)
Q Consensus 115 VD~Vv~~-~py~--~---t~dfle~-ll~~l~~d~VV~GdD~~ 150 (307)
-+.+++. .|+. + .+.-+.. +.+.++|..+++|-|+.
T Consensus 253 ~~~v~l~~~p~~m~~agprea~~ha~ir~n~G~th~ivgrdha 295 (573)
T 1m8p_A 253 NGMAVLGLLGLAMRMGGPREAIWHAIIRKNHGATHFIVGRDHA 295 (573)
T ss_dssp TTSEEECBBCCCCCCCHHHHHHHHHHHHHHHTCSEEEECTTTT
T ss_pred CCcEEEEecCchhhccCchHHHHHHHHHHHCCCCeEEECCCCC
Confidence 2444441 2221 1 1223333 44569999999998875
No 91
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=89.22 E-value=0.34 Score=44.95 Aligned_cols=39 Identities=26% Similarity=0.578 Sum_probs=33.1
Q ss_pred CCeEEEEeCcccccCHHHHHHHHHHHhCCCEEEEEEeCcc
Q 021802 248 DARIIYIDGAFDLFHAGHVEILRIARGLGDFLLVGIHNDQ 287 (307)
Q Consensus 248 ~~~~v~~~G~FDl~H~GHi~~L~~a~~~g~~liVgv~~D~ 287 (307)
+++|++|+ +..-+|.||..++++|++.+|.+||.+.-+.
T Consensus 21 g~~ig~VP-TMG~LH~GH~sLi~~A~~~~d~vVvSifvnP 59 (283)
T 3uk2_A 21 QNRTAFVP-TMGNLHEGHLSLMRLARQHGDPVVASIFVNR 59 (283)
T ss_dssp CSSCEEEE-ECSSCCHHHHHHHHHHHTTCSSEEEEECCCG
T ss_pred CCeEEEEC-CCCcccHHHHHHHHHHHHhCCEEEEEEcCCH
Confidence 45677764 7778999999999999999999999997664
No 92
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=81.60 E-value=0.83 Score=43.46 Aligned_cols=31 Identities=23% Similarity=0.217 Sum_probs=26.7
Q ss_pred EEEeCcccccCHHHHHHHHHHHhCCCEEEEE
Q 021802 252 IYIDGAFDLFHAGHVEILRIARGLGDFLLVG 282 (307)
Q Consensus 252 v~~~G~FDl~H~GHi~~L~~a~~~g~~liVg 282 (307)
|+.-|+||++|.||..+.++|.+.+|.|++-
T Consensus 158 VvafqTrNPiHrgH~~l~~~ale~~d~vll~ 188 (349)
T 1v47_A 158 VVAFQTRNAPHRAHEYLIRLGLELADGVLVH 188 (349)
T ss_dssp EEEEEESSCCCHHHHHHHHHHHHHSSEEEEE
T ss_pred EEEeecCCCCchHHHHHHHHHHHhCCcEEEE
Confidence 4558999999999999999999888877663
No 93
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=79.92 E-value=0.79 Score=44.38 Aligned_cols=29 Identities=21% Similarity=0.154 Sum_probs=24.6
Q ss_pred EEEeCcccccCHHHHHHHHHHHhCC--CEEE
Q 021802 252 IYIDGAFDLFHAGHVEILRIARGLG--DFLL 280 (307)
Q Consensus 252 v~~~G~FDl~H~GHi~~L~~a~~~g--~~li 280 (307)
|+..|+||++|.||..+.+.|.+.. |.|+
T Consensus 195 VvafqTrNPiHrgH~~l~~~Ale~~~~D~vl 225 (396)
T 1jhd_A 195 VVAFQTRNPMHRAHEELCRMAMESLDADGVV 225 (396)
T ss_dssp EEEEEESSCCCHHHHHHHHHHHHHHTCSEEE
T ss_pred EEEeccCCCCchHHHHHHHHHHHHcCCCeEE
Confidence 5559999999999999999998765 7655
No 94
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=46.12 E-value=18 Score=24.22 Aligned_cols=28 Identities=14% Similarity=0.213 Sum_probs=18.0
Q ss_pred ccchhhhhHHHHHhhhHHHHHHHHHHHh
Q 021802 5 GKEQSARILATCLIAGAVMVAGFSLLTL 32 (307)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (307)
|.+++.+.++...+||++.++..+++++
T Consensus 4 ~~~s~~~aIA~gVVgGv~~v~ii~~~~~ 31 (44)
T 2l2t_A 4 PQHARTPLIAAGVIGGLFILVIVGLTFA 31 (44)
T ss_dssp CSSCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcceEEEeehHHHHHHHHHHHHHH
Confidence 4556777778888887755555555544
No 95
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=30.38 E-value=32 Score=34.37 Aligned_cols=30 Identities=17% Similarity=0.094 Sum_probs=24.0
Q ss_pred EEEeCcccccCHHHHHHHHHHHh-CCCEEEE
Q 021802 252 IYIDGAFDLFHAGHVEILRIARG-LGDFLLV 281 (307)
Q Consensus 252 v~~~G~FDl~H~GHi~~L~~a~~-~g~~liV 281 (307)
|+.-=+++++|.||..++++|.. .|+.|+|
T Consensus 193 v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv 223 (573)
T 1m8p_A 193 VVAFQTRNPMHRAHRELTVRAARSRQANVLI 223 (573)
T ss_dssp EEEECCSSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEeeCCCcchhhHHHHHHHHHhcCCcEEE
Confidence 45577899999999999998884 4776655
No 96
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=29.07 E-value=29 Score=23.08 Aligned_cols=25 Identities=12% Similarity=0.076 Sum_probs=14.4
Q ss_pred hhhhhHHHHHhhhHHHHHHHHHHHh
Q 021802 8 QSARILATCLIAGAVMVAGFSLLTL 32 (307)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (307)
++.+.++...+||++.++..+++++
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~~~~ 32 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVALGIG 32 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEeehhHHHHHHHHHHHHHH
Confidence 5556667777777654444444443
No 97
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=26.87 E-value=2.1e+02 Score=25.61 Aligned_cols=55 Identities=16% Similarity=0.082 Sum_probs=31.9
Q ss_pred CCCCHHHHHHHHHHcc-CccEEEEcCCCcccHHHHHH--HHHhcCccEEEEcCCCCcC
Q 021802 98 PVTPLHERMIMVNAVK-WVDEVISDAPYAITKDFMKK--LFDEYNIDYIIHGDDPCVL 152 (307)
Q Consensus 98 pi~s~eER~~ll~~~k-~VD~Vv~~~py~~t~dfle~--ll~~l~~d~VV~GdD~~fg 152 (307)
+.+|.+||.++++.+. -+..|+.+..-.-+.+-++. ..++.++|.+.+-..+.+.
T Consensus 47 ~~Ls~eEr~~v~~~~~~~~~gViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 104 (288)
T 2nuw_A 47 PALSKDEKRQNLNALYDVTHKLIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYYFP 104 (288)
T ss_dssp GGSCHHHHHHHHHHHTTTCSCEEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCSSC
T ss_pred hhCCHHHHHHHHHHHHHHhCCeEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCC
Confidence 5578888888887733 23335555443233444332 3355788888777665554
No 98
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=26.47 E-value=1.9e+02 Score=25.86 Aligned_cols=55 Identities=16% Similarity=0.095 Sum_probs=29.7
Q ss_pred CCCCHHHHHHHHHHcc-CccEEEEcCCCcccHHHHHH--HHHhcCccEEEEcCCCCcC
Q 021802 98 PVTPLHERMIMVNAVK-WVDEVISDAPYAITKDFMKK--LFDEYNIDYIIHGDDPCVL 152 (307)
Q Consensus 98 pi~s~eER~~ll~~~k-~VD~Vv~~~py~~t~dfle~--ll~~l~~d~VV~GdD~~fg 152 (307)
+.+|.+||.++++.+. -++.|+.+..-.-+.+-++. ..++.++|.+.+-..+.+.
T Consensus 47 ~~Ls~eEr~~v~~~~~~~~~gviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 104 (293)
T 1w3i_A 47 PSLSPEEKLENLKAVYDVTNKIIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYYYP 104 (293)
T ss_dssp GGSCHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCCSCS
T ss_pred hhCCHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCC
Confidence 5577778877777632 22325554433223444332 2345677777776665544
No 99
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=26.44 E-value=60 Score=29.15 Aligned_cols=68 Identities=18% Similarity=0.247 Sum_probs=42.1
Q ss_pred eEEEEecccCcC-CHHHHHHHHHHHHcC-CeEEEEEeCChhhhhcCCCCCCCHHHHHH---HHHHccCccEEEEcCCCcc
Q 021802 52 VRVYMDGCFDMM-HYGHCNALRQARALG-DQLVVGVVSDAEIIANKGPPVTPLHERMI---MVNAVKWVDEVISDAPYAI 126 (307)
Q Consensus 52 ~~V~~~G~FD~l-H~GH~~lL~qAk~~g-d~LiVgV~sD~~i~~~Kg~pi~s~eER~~---ll~~~k~VD~Vv~~~py~~ 126 (307)
.-++..|+++++ |+|=-+.+++|++.| |-++ .+| ++.||..+ ..+.. +++.+.+-+| +.
T Consensus 89 ~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~I---ipD-----------LP~eE~~~~~~~~~~~-Gl~~I~lvaP-~t 152 (252)
T 3tha_A 89 KALVFMVYYNLIFSYGLEKFVKKAKSLGICALI---VPE-----------LSFEESDDLIKECERY-NIALITLVSV-TT 152 (252)
T ss_dssp SEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEE---CTT-----------CCGGGCHHHHHHHHHT-TCEECEEEET-TS
T ss_pred CCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEE---eCC-----------CCHHHHHHHHHHHHHc-CCeEEEEeCC-CC
Confidence 458999999977 779999999999987 5444 234 12223222 23333 7777765344 33
Q ss_pred cHHHHHHHH
Q 021802 127 TKDFMKKLF 135 (307)
Q Consensus 127 t~dfle~ll 135 (307)
+++.++.+.
T Consensus 153 ~~eRi~~ia 161 (252)
T 3tha_A 153 PKERVKKLV 161 (252)
T ss_dssp CHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 456665543
No 100
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=25.06 E-value=60 Score=29.37 Aligned_cols=91 Identities=9% Similarity=0.190 Sum_probs=48.1
Q ss_pred HHhHhhhcC-CCCeEEEEecccCc-CCHHHHHHHHHHHHcC-CeEEEEEeCChhhhhcCCCCCCCHHHHHHHHHHccCcc
Q 021802 40 RWLQWTRKK-KKPVRVYMDGCFDM-MHYGHCNALRQARALG-DQLVVGVVSDAEIIANKGPPVTPLHERMIMVNAVKWVD 116 (307)
Q Consensus 40 ~~~~~~~~~-~~~~~V~~~G~FD~-lH~GH~~lL~qAk~~g-d~LiVgV~sD~~i~~~Kg~pi~s~eER~~ll~~~k~VD 116 (307)
..++..++. .+.+ ++..|++++ +++|=.+.++++++.| |-+++ +|- |+-..++=.+.++.. +++
T Consensus 86 ~~v~~~r~~~~~~P-ivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIi---pDl--------p~ee~~~~~~~~~~~-gl~ 152 (271)
T 3nav_A 86 ELIAQIRARNPETP-IGLLMYANLVYARGIDDFYQRCQKAGVDSVLI---ADV--------PTNESQPFVAAAEKF-GIQ 152 (271)
T ss_dssp HHHHHHHHHCTTSC-EEEEECHHHHHHTCHHHHHHHHHHHTCCEEEE---TTS--------CGGGCHHHHHHHHHT-TCE
T ss_pred HHHHHHHhcCCCCC-EEEEecCcHHHHHhHHHHHHHHHHCCCCEEEE---CCC--------CHHHHHHHHHHHHHc-CCe
Confidence 455555544 3433 556788987 4568888999998886 65554 331 111112222233332 677
Q ss_pred EEEEcCCCcccHHHHHHHHHhcCccEEEE
Q 021802 117 EVISDAPYAITKDFMKKLFDEYNIDYIIH 145 (307)
Q Consensus 117 ~Vv~~~py~~t~dfle~ll~~l~~d~VV~ 145 (307)
.+.+-+| +.+++.++.+.+ ...++|.+
T Consensus 153 ~I~lvap-~t~~eri~~i~~-~~~gfiY~ 179 (271)
T 3nav_A 153 PIFIAPP-TASDETLRAVAQ-LGKGYTYL 179 (271)
T ss_dssp EEEEECT-TCCHHHHHHHHH-HCCSCEEE
T ss_pred EEEEECC-CCCHHHHHHHHH-HCCCeEEE
Confidence 6655344 334566655433 34444443
No 101
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=24.00 E-value=43 Score=26.26 Aligned_cols=22 Identities=23% Similarity=0.442 Sum_probs=17.7
Q ss_pred ccceehcccCCCCCCCCCeEEE
Q 021802 232 TSRRIVQFSNGKGPGPDARIIY 253 (307)
Q Consensus 232 t~~~i~~f~~~~~~~~~~~~v~ 253 (307)
+.+.++-||+|+.|..++++++
T Consensus 51 ~~rsLvvFSsgYrP~r~D~Vv~ 72 (102)
T 2pp6_A 51 NGKNVVVFSGNVIPRRGDRVVL 72 (102)
T ss_dssp -CEEEEECCSSCCCCTTCEEEE
T ss_pred CceEEEEecCCcccCCCCEEEE
Confidence 5667888999999999887764
No 102
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=22.04 E-value=53 Score=32.47 Aligned_cols=29 Identities=17% Similarity=0.090 Sum_probs=21.6
Q ss_pred EEEeCcccccCHHHHHHHHHHH-hCCCEEE
Q 021802 252 IYIDGAFDLFHAGHVEILRIAR-GLGDFLL 280 (307)
Q Consensus 252 v~~~G~FDl~H~GHi~~L~~a~-~~g~~li 280 (307)
|+.-.+.+++|.||.+++.++. +.++-|+
T Consensus 191 v~afqtrnP~HraH~e~~~~~a~e~~~~ll 220 (511)
T 1g8f_A 191 VVAFQTRNPMHRAHRELTVRAAREANAKVL 220 (511)
T ss_dssp EEEEEESSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEecCCCCchHHHHHHHHHHHHcCCcEE
Confidence 5557899999999988887665 4466444
No 103
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=21.77 E-value=1.8e+02 Score=25.92 Aligned_cols=55 Identities=13% Similarity=0.104 Sum_probs=27.8
Q ss_pred CCCCHHHHHHHHHHcc-CccEEEEcCCCcccHHHHHH--HHHhcCccEEEEcCCCCcC
Q 021802 98 PVTPLHERMIMVNAVK-WVDEVISDAPYAITKDFMKK--LFDEYNIDYIIHGDDPCVL 152 (307)
Q Consensus 98 pi~s~eER~~ll~~~k-~VD~Vv~~~py~~t~dfle~--ll~~l~~d~VV~GdD~~fg 152 (307)
+.+|.+||.++++.+. -++.|+.+..-.-+.+-++. ..++.++|.+.+-..+.+.
T Consensus 46 ~~Ls~~Er~~v~~~~~~~~~gvi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 103 (286)
T 2r91_A 46 PALSLQEKMELTDAATSAARRVIVQVASLNADEAIALAKYAESRGAEAVASLPPYYFP 103 (286)
T ss_dssp GGSCHHHHHHHHHHHHHHCSSEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSST
T ss_pred hhCCHHHHHHHHHHHHHHhCCEEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCC
Confidence 4567777777666522 11225554433223333322 2345677777776655544
No 104
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=21.73 E-value=2.1e+02 Score=24.28 Aligned_cols=11 Identities=27% Similarity=0.416 Sum_probs=5.8
Q ss_pred CCCCH-HHHHHH
Q 021802 175 EGVSS-TDIVGR 185 (307)
Q Consensus 175 ~~VSS-T~Ir~r 185 (307)
.+|+| .++.+.
T Consensus 195 GGI~~~~d~~~~ 206 (241)
T 1qo2_A 195 GGISSENSLKTA 206 (241)
T ss_dssp SSCCSHHHHHHH
T ss_pred CCCCCHHHHHHH
Confidence 46665 555443
No 105
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=20.03 E-value=73 Score=31.54 Aligned_cols=30 Identities=27% Similarity=0.225 Sum_probs=24.4
Q ss_pred EEEeCcccccCHHHHHHHHHHHh-CCCEEEE
Q 021802 252 IYIDGAFDLFHAGHVEILRIARG-LGDFLLV 281 (307)
Q Consensus 252 v~~~G~FDl~H~GHi~~L~~a~~-~g~~liV 281 (307)
|+.-=++.++|.||..++++|.. .++.|+|
T Consensus 166 v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv 196 (546)
T 2gks_A 166 IVAFQTRNPMHRVHEELTKRAMEKVGGGLLL 196 (546)
T ss_dssp EEEECCSSCCCHHHHHHHHHHHHHHTSEEEE
T ss_pred EEEEecCCCCcHHHHHHHHHHHHhcCCcEEE
Confidence 55578899999999999998885 5776655
Done!