BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021804
MAAATLSFSLSLDPQQYHNKTGTAPASPIISTKHSHFPLHKSNHCQLSNFLSFSHSSSSP
APTTASSFLEDSFSAGRFLTNEELEKLKTLEHFVHFQELQSGFLWVRVMRPEEMDRTVSL
LAESFSESMLLPVGYNKLLRFFVKQYLIERRAVMPHAATLIGFYRGKGESESGEDVDFAG
TVEVCFDKRGANASPATPTPPKNSPYICNMTVRKERRRRGIGWHLLKASEELISQMSSSK
EVYLHCRMIDEAPFNMYTKAGYSVVKTDNIIVLLTLQRRKHLMCKKLPVVDHPSESDVSG
SVEELPS

High Scoring Gene Products

Symbol, full name Information P value
AT1G24040 protein from Arabidopsis thaliana 5.2e-81

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021804
        (307 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2199937 - symbol:AT1G24040 species:3702 "Arabi...   813  5.2e-81   1


>TAIR|locus:2199937 [details] [associations]
            symbol:AT1G24040 species:3702 "Arabidopsis thaliana"
            [GO:0008080 "N-acetyltransferase activity" evidence=IEA;ISS]
            [GO:0008152 "metabolic process" evidence=ISS] [GO:0009507
            "chloroplast" evidence=ISM] InterPro:IPR000182 Pfam:PF00583
            EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:3.40.630.30
            InterPro:IPR016181 SUPFAM:SSF55729 EMBL:AC002423 GO:GO:0008080
            EMBL:BT010890 EMBL:AK117728 EMBL:AK175581 EMBL:AK175958
            EMBL:AK176031 EMBL:AK228115 IPI:IPI00532716 RefSeq:NP_173815.2
            RefSeq:NP_849703.1 UniGene:At.19813 ProteinModelPortal:Q9LR91
            PaxDb:Q9LR91 PRIDE:Q9LR91 EnsemblPlants:AT1G24040.1
            EnsemblPlants:AT1G24040.2 GeneID:839016 KEGG:ath:AT1G24040
            TAIR:At1g24040 eggNOG:NOG242821 HOGENOM:HOG000077760
            InParanoid:Q9LR91 OMA:WAPAQRY PhylomeDB:Q9LR91
            ProtClustDB:CLSN2680186 ArrayExpress:Q9LR91 Genevestigator:Q9LR91
            Uniprot:Q9LR91
        Length = 319

 Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
 Identities = 176/317 (55%), Positives = 210/317 (66%)

Query:     1 MAAATLSFSLSLD---PQQYHNKTGTAPAS---PIISTKHSHFPLHKSNHCQXXXXXXXX 54
             MAA ++S + S+D   P Q   K G + +S   P++ +  SH    +             
Sbjct:     1 MAALSISLAFSVDSLKPTQ-STKFGFSSSSHRYPLLYSCKSHRSNLRFAFPPSSVSTATE 59

Query:    55 XXXXXXXXXXXXXFLEDSFSAGRFXXXXXXXXXXXXXHFVHFQELQSGFLWVRVMRPEEM 114
                          FLE+SF  GRF              F +FQEL+SG +WVRVMR EEM
Sbjct:    60 TGEENSKSTGNYAFLEESFRTGRFLSNDELEKLKTLEGFAYFQELESGSMWVRVMRHEEM 119

Query:   115 DRTVSLLAESFSESMLLPVGYNKLLRFFVKQYLIERRAVMPHAATLIGFYRGKGE--SES 172
             D TV LLAESF ESMLLP GY  +LRF +KQYLIERR V+PHA TL+GF+R K +  S+ 
Sbjct:   120 DSTVHLLAESFGESMLLPSGYQSVLRFLIKQYLIERREVLPHAVTLVGFFRKKVDEFSDD 179

Query:   173 GED-VDFAGTVEVCFDKRGANASPATPTPPKNSPYICNMTVRKERRRRGIGWHLLKASEE 231
             GE+    AGTVEVC +KRGANASP +PTPPK SPYICNMTV+++ RRRGIGWHLLKASEE
Sbjct:   180 GEEEAVMAGTVEVCLEKRGANASPPSPTPPKESPYICNMTVKEDLRRRGIGWHLLKASEE 239

Query:   232 LISQMSSSKEVYLHCRMIDEAPFNMYTKAGYSVVKTDNIIVLLTLQRRKHLMCKKL-PVV 290
             LISQ+S SK+VYLHCRM+DEAPFNMY KAGY VVKTD ++VLL LQRRKHLM KKL P+ 
Sbjct:   240 LISQISPSKDVYLHCRMVDEAPFNMYKKAGYEVVKTDTVLVLLMLQRRKHLMRKKLLPLC 299

Query:   291 DHPSESDVSGSVEELPS 307
              +P    V GS  EL S
Sbjct:   300 TNPIVEMV-GSDNELTS 315


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      307       273    0.0010  114 3  11 22  0.47    33
                                                     32  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  201 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.14u 0.09s 23.23t   Elapsed:  00:00:01
  Total cpu time:  23.14u 0.09s 23.23t   Elapsed:  00:00:01
  Start:  Fri May 10 13:10:12 2013   End:  Fri May 10 13:10:13 2013

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