Query 021805
Match_columns 307
No_of_seqs 364 out of 2174
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 09:34:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021805.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021805hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1g0s_A Hypothetical 23.7 kDa p 99.9 1.6E-26 5.4E-31 205.3 19.2 166 108-296 19-199 (209)
2 1vhz_A ADP compounds hydrolase 99.9 5.2E-25 1.8E-29 194.0 20.8 166 108-301 13-186 (198)
3 3o6z_A GDP-mannose pyrophospha 99.9 2.6E-25 9E-30 194.5 16.8 165 107-295 6-185 (191)
4 2dsc_A ADP-sugar pyrophosphata 99.9 3.7E-24 1.3E-28 190.0 21.8 158 108-283 20-185 (212)
5 1mk1_A ADPR pyrophosphatase; n 99.9 2.5E-24 8.6E-29 190.4 19.3 171 108-303 9-185 (207)
6 3q91_A Uridine diphosphate glu 99.9 1.4E-24 4.6E-29 194.9 12.6 142 128-286 20-193 (218)
7 2yvp_A NDX2, MUTT/nudix family 99.9 4.5E-23 1.5E-27 177.7 15.4 164 108-298 7-176 (182)
8 2w4e_A MUTT/nudix family prote 99.9 1.6E-22 5.5E-27 168.4 13.5 130 142-296 3-137 (145)
9 1v8y_A ADP-ribose pyrophosphat 99.9 4.3E-21 1.5E-25 163.7 14.7 152 109-298 10-167 (170)
10 3son_A Hypothetical nudix hydr 99.7 2.2E-16 7.5E-21 130.9 16.7 123 143-283 4-126 (149)
11 3shd_A Phosphatase NUDJ; nudix 99.7 2.1E-16 7.3E-21 131.3 16.0 109 146-279 5-113 (153)
12 3cng_A Nudix hydrolase; struct 99.7 2E-16 6.8E-21 137.4 15.7 121 155-304 49-170 (189)
13 2b0v_A Nudix hydrolase; struct 99.7 1.5E-16 5.2E-21 131.8 13.6 112 146-281 8-120 (153)
14 3gg6_A Nudix motif 18, nucleos 99.7 1.7E-16 5.9E-21 132.5 13.0 109 159-291 32-140 (156)
15 1sjy_A MUTT/nudix family prote 99.7 3.7E-16 1.3E-20 130.3 14.7 103 160-283 26-132 (159)
16 2yyh_A MUTT domain, 8-OXO-DGTP 99.7 6.2E-16 2.1E-20 126.7 15.7 100 161-289 27-131 (139)
17 3h95_A Nucleoside diphosphate- 99.7 2.9E-16 1E-20 137.4 14.4 124 141-287 23-146 (199)
18 3i7u_A AP4A hydrolase; nudix p 99.7 2.1E-16 7.3E-21 130.3 12.6 108 146-283 6-114 (134)
19 4dyw_A MUTT/nudix family prote 99.7 3.9E-16 1.3E-20 131.3 13.4 114 147-283 30-143 (157)
20 1ktg_A Diadenosine tetraphosph 99.7 1.4E-15 4.7E-20 123.9 15.9 114 146-283 5-120 (138)
21 3u53_A BIS(5'-nucleosyl)-tetra 99.7 1.3E-15 4.3E-20 127.7 15.7 107 156-283 21-127 (155)
22 2a6t_A SPAC19A8.12; alpha/beta 99.7 2.4E-16 8.3E-21 145.4 11.4 116 144-285 101-216 (271)
23 3gwy_A Putative CTP pyrophosph 99.7 1.8E-15 6.2E-20 124.2 14.7 99 160-283 18-118 (140)
24 3i9x_A MUTT/nudix family prote 99.7 7.8E-16 2.7E-20 133.2 12.2 118 158-297 45-173 (187)
25 3r03_A Nudix hydrolase; struct 99.6 2.1E-15 7.1E-20 123.7 13.2 101 160-283 21-121 (144)
26 2pbt_A AP4A hydrolase; nudix p 99.6 1.3E-15 4.6E-20 123.2 11.9 108 146-283 6-114 (134)
27 1f3y_A Diadenosine 5',5'''-P1, 99.6 3.2E-15 1.1E-19 124.9 14.4 128 145-285 15-149 (165)
28 3grn_A MUTT related protein; s 99.6 1.1E-14 3.6E-19 121.3 16.3 99 160-282 21-120 (153)
29 3hhj_A Mutator MUTT protein; n 99.6 3.2E-15 1.1E-19 125.2 12.6 102 159-283 41-142 (158)
30 2fb1_A Conserved hypothetical 99.6 1.6E-15 5.4E-20 136.1 10.8 130 146-297 15-144 (226)
31 1nqz_A COA pyrophosphatase (MU 99.6 1.5E-15 5E-20 131.9 10.3 115 146-282 36-152 (194)
32 3q93_A 7,8-dihydro-8-oxoguanin 99.6 5.5E-15 1.9E-19 127.0 13.5 110 147-283 26-136 (176)
33 2rrk_A ORF135, CTP pyrophospho 99.6 5.2E-15 1.8E-19 120.6 12.6 103 155-284 18-120 (140)
34 2fkb_A Putative nudix hydrolas 99.6 6.4E-15 2.2E-19 125.9 13.6 120 146-294 39-164 (180)
35 3oga_A Nucleoside triphosphata 99.6 7.2E-15 2.5E-19 123.8 13.6 111 160-283 40-151 (165)
36 3f6a_A Hydrolase, nudix family 99.6 4.5E-15 1.5E-19 124.5 12.2 118 146-283 8-135 (159)
37 1u20_A U8 snoRNA-binding prote 99.6 1.2E-15 3.9E-20 135.6 8.5 143 118-281 18-165 (212)
38 1rya_A GDP-mannose mannosyl hy 99.6 8.7E-15 3E-19 122.0 13.3 105 160-283 31-140 (160)
39 1vcd_A NDX1; nudix protein, di 99.6 1.2E-14 4E-19 116.5 13.5 108 146-285 4-111 (126)
40 2o1c_A DATP pyrophosphohydrola 99.6 3.5E-15 1.2E-19 122.5 10.6 124 144-285 9-136 (150)
41 1q27_A Putative nudix hydrolas 99.6 6.7E-15 2.3E-19 124.8 12.7 120 146-291 36-163 (171)
42 2jvb_A Protein PSU1, mRNA-deca 99.6 1.8E-15 6E-20 124.8 8.7 112 145-283 5-116 (146)
43 2fml_A MUTT/nudix family prote 99.6 2.1E-14 7.3E-19 132.3 16.7 119 158-300 55-201 (273)
44 3exq_A Nudix family hydrolase; 99.6 3.4E-15 1.2E-19 126.0 10.5 106 153-283 17-123 (161)
45 3q1p_A Phosphohydrolase (MUTT/ 99.6 5.3E-15 1.8E-19 130.3 11.8 102 160-285 80-182 (205)
46 3id9_A MUTT/nudix family prote 99.6 6E-15 2E-19 125.1 11.6 105 155-283 32-137 (171)
47 3ees_A Probable pyrophosphohyd 99.6 1.1E-14 3.6E-19 120.2 12.8 100 160-284 34-133 (153)
48 3eds_A MUTT/nudix family prote 99.6 2.9E-15 9.8E-20 125.3 8.9 104 160-283 34-137 (153)
49 3o8s_A Nudix hydrolase, ADP-ri 99.6 8.4E-15 2.9E-19 129.1 11.5 102 160-286 82-184 (206)
50 3gz5_A MUTT/nudix family prote 99.6 1.7E-14 5.7E-19 130.6 13.8 131 146-298 24-158 (240)
51 2azw_A MUTT/nudix family prote 99.6 5.3E-15 1.8E-19 121.6 9.4 116 145-287 19-136 (148)
52 2fvv_A Diphosphoinositol polyp 99.6 4.2E-15 1.4E-19 130.3 7.6 117 147-290 43-159 (194)
53 3fcm_A Hydrolase, nudix family 99.6 4.1E-14 1.4E-18 123.4 13.6 104 159-287 58-173 (197)
54 2b06_A MUTT/nudix family prote 99.6 6.5E-14 2.2E-18 116.5 14.1 97 161-283 25-121 (155)
55 1mut_A MUTT, nucleoside tripho 99.5 4.6E-15 1.6E-19 119.0 5.9 99 160-283 17-115 (129)
56 2pqv_A MUTT/nudix family prote 99.5 4.7E-14 1.6E-18 117.3 11.3 100 160-283 31-131 (154)
57 1vk6_A NADH pyrophosphatase; 1 99.5 6.8E-14 2.3E-18 129.0 13.1 115 141-285 136-250 (269)
58 2xsq_A U8 snoRNA-decapping enz 99.5 6.1E-14 2.1E-18 125.3 11.7 121 174-306 75-206 (217)
59 1hzt_A Isopentenyl diphosphate 99.5 3.4E-14 1.2E-18 122.9 9.6 114 146-283 34-152 (190)
60 2kdv_A RNA pyrophosphohydrolas 99.5 4.7E-13 1.6E-17 113.6 15.5 118 146-283 10-137 (164)
61 3fjy_A Probable MUTT1 protein; 99.5 2.3E-13 8E-18 129.7 14.7 113 156-283 35-160 (364)
62 3fk9_A Mutator MUTT protein; s 99.5 2.5E-13 8.5E-18 118.0 11.5 99 160-283 16-116 (188)
63 2qjo_A Bifunctional NMN adenyl 99.5 2.4E-13 8.3E-18 127.3 12.2 105 160-281 215-322 (341)
64 1k2e_A Nudix homolog; nudix/MU 99.5 1.6E-13 5.4E-18 115.0 9.7 44 160-208 13-56 (156)
65 2qjt_B Nicotinamide-nucleotide 99.5 5.2E-13 1.8E-17 125.8 14.4 104 160-281 220-329 (352)
66 3f13_A Putative nudix hydrolas 99.5 6.1E-13 2.1E-17 113.3 12.8 88 155-278 25-112 (163)
67 1x51_A A/G-specific adenine DN 99.4 1E-12 3.5E-17 109.5 12.9 100 159-283 34-135 (155)
68 3e57_A Uncharacterized protein 99.3 7.2E-13 2.5E-17 118.1 6.3 103 155-283 77-190 (211)
69 3dup_A MUTT/nudix family prote 99.3 7.8E-12 2.7E-16 116.9 12.3 141 146-305 120-269 (300)
70 1q33_A Pyrophosphatase, ADP-ri 99.3 3.6E-11 1.2E-15 111.8 12.3 123 159-293 139-274 (292)
71 2dho_A Isopentenyl-diphosphate 99.2 5.3E-11 1.8E-15 107.4 10.4 114 146-284 61-193 (235)
72 2pny_A Isopentenyl-diphosphate 99.2 4.9E-11 1.7E-15 108.4 9.0 114 146-284 72-204 (246)
73 3qsj_A Nudix hydrolase; struct 99.1 1.4E-10 4.8E-15 104.6 9.5 61 146-207 10-92 (232)
74 3fsp_A A/G-specific adenine gl 99.1 3.4E-10 1.2E-14 108.4 10.3 96 159-283 252-347 (369)
75 3rh7_A Hypothetical oxidoreduc 98.8 1.5E-08 5E-13 95.5 11.0 113 149-304 186-300 (321)
76 3bho_A Cleavage and polyadenyl 98.7 1.6E-07 5.6E-12 82.7 11.6 83 154-244 68-160 (208)
77 3kvh_A Protein syndesmos; NUDT 98.6 7E-08 2.4E-12 84.4 7.5 118 166-305 49-181 (214)
78 1t6a_A Rbstp2229 gene product; 36.1 24 0.00083 28.0 2.9 40 58-99 80-119 (126)
No 1
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.95 E-value=1.6e-26 Score=205.34 Aligned_cols=166 Identities=27% Similarity=0.396 Sum_probs=126.5
Q ss_pred EeeEeeecccccEEEEEEEEEE--cCCC---cEEeEEEEEeCCEEEEEEEEecCCceEEEEEEeeecCCC-----CeEEE
Q 021805 108 IQGVDMFGKRIGFLKFKADIFC--KETG---QKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTG-----RVILE 177 (307)
Q Consensus 108 i~~~~~fg~r~~~i~~~~d~~~--~~~G---~~~~~~v~~r~~aVaVl~il~~~g~~~VLLvrQ~R~p~g-----~~~wE 177 (307)
+++..+|. ||+++..+.+. .++| +...+.++.++++|+|+++. +++++|||++|+|.+.+ .+.|+
T Consensus 19 ~~~~~v~~---g~~~v~~~~~~~~~~~g~~~~~~~r~~~~~~~av~vl~~~--~~~~~vLLvrq~R~~~~~~~~~~~~we 93 (209)
T 1g0s_A 19 IARETLYR---GFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAAVLLPFD--PVRDEVVLIEQIRIAAYDTSETPWLLE 93 (209)
T ss_dssp EEEEEEEE---SSSEEEEEEEEEBCTTSCBCCCEEEEEEECCCEEEEEEEE--TTTTEEEEEEEECGGGGGGSSCSEEEE
T ss_pred EEEEEEEe---eeEEEEEEEEEEEcCCCCcceEEEEEEEeCCCEEEEEEEE--CCCCEEEEEEeecccCCCCCCCCeEEE
Confidence 34455554 38888888765 5777 46788899999999999873 22247999999999875 57999
Q ss_pred ccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEEEEEEEEechhHHHHHhccC
Q 021805 178 LPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGK 257 (307)
Q Consensus 178 lPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~ 257 (307)
+|||++|+| |++.+||+||++||||+++. .+..++. +|++||.+++.+++|++....... .+
T Consensus 94 lPgG~ve~g-E~~~~aA~REl~EEtGl~~~--~~~~l~~---------~~~~~g~~~~~~~~f~a~~~~~~~-----~~- 155 (209)
T 1g0s_A 94 MVAGMIEEG-ESVEDVARREAIEEAGLIVK--RTKPVLS---------FLASPGGTSERSSIMVGEVDATTA-----SG- 155 (209)
T ss_dssp CEEEECCTT-CCHHHHHHHHHHHHHCCCCC--CEEEEEE---------EESCTTTBCCEEEEEEEECCGGGC-----C--
T ss_pred eCcccCCCC-cCHHHHHHHHHHHHcCcccC--cEEEeEE---------EecCCCccCcEEEEEEEEEccccc-----cC-
Confidence 999999998 99999999999999999984 6777764 789999999999999887532210 01
Q ss_pred CCccCCCCceEEEEEEchhhHhhccC-----ChhHHHHHHHHHH
Q 021805 258 ETGLRDHGELIKVRVVPYRELWRTTP-----DAKVLTAIALYEM 296 (307)
Q Consensus 258 ~~g~~~~~E~i~v~wvpleel~~~i~-----D~ktl~al~L~~~ 296 (307)
..+..+++|.+++.|+|++++.+++. |+++++|++++..
T Consensus 156 ~~~~~~e~E~~~~~w~~~~el~~~i~~g~i~d~~t~~al~~~~~ 199 (209)
T 1g0s_A 156 IHGLADENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQL 199 (209)
T ss_dssp -------CCSCEEEEEEHHHHHHHHHTTSSCBHHHHHHHHHHHH
T ss_pred CCCCCCCCcEEEEEEEEHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 01234788999999999999998764 8889988866653
No 2
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.93 E-value=5.2e-25 Score=194.01 Aligned_cols=166 Identities=14% Similarity=0.132 Sum_probs=130.8
Q ss_pred EeeEeeecccccEEEEEEEEEEcCCCcEEeEEEEE--eCCEEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCC
Q 021805 108 IQGVDMFGKRIGFLKFKADIFCKETGQKVPGIVFA--RGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDD 185 (307)
Q Consensus 108 i~~~~~fg~r~~~i~~~~d~~~~~~G~~~~~~v~~--r~~aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~ 185 (307)
+++..+|. ++|+++..+.+..++|....+.+.. ++++|+|+++. ++ +|||++|+|.+.+.+.|+||||++|+
T Consensus 13 ~~~~~~~~--~~~~~v~~~~~~~~~G~~~~~~~~~~~~~~av~vl~~~--~~--~vLLvrq~r~~~~~~~welPgG~ve~ 86 (198)
T 1vhz_A 13 LNVETVAR--SRLFTVESVDLEFSNGVRRVYERMRPTNREAVMIVPIV--DD--HLILIREYAVGTESYELGFSKGLIDP 86 (198)
T ss_dssp EEEEEEEE--CSSCEEEEEEEECTTSCEEEEEEECCCCCCEEEEEEEE--TT--EEEEEEEEETTTTEEEEECEEEECCT
T ss_pred eeEEEEEE--CCEEEEEEEEEEcCCCCEEEEEEEEeCCCCEEEEEEEE--CC--EEEEEEcccCCCCCcEEEeCcccCCC
Confidence 44455554 6899999999999999987666654 67888888763 33 79999999998777899999999999
Q ss_pred CCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCC
Q 021805 186 DKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHG 265 (307)
Q Consensus 186 g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~ 265 (307)
| |++.+||+||++||||+++. .+..++. ++.+++.+++.+++|++...... . ...+++
T Consensus 87 g-Es~~~aA~REl~EEtGl~~~--~~~~l~~---------~~~~~~~~~~~~~~f~a~~~~~~--------~--~~~~~~ 144 (198)
T 1vhz_A 87 G-ESVYEAANRELKEEVGFGAN--DLTFLKK---------LSMAPSYFSSKMNIVVAQDLYPE--------S--LEGDEP 144 (198)
T ss_dssp T-CCHHHHHHHHHHHHHSEEEE--EEEEEEE---------EECCTTTCCCEEEEEEEEEEEEC--------C--CCCCCS
T ss_pred C-cCHHHHHHHHHHHHHCCCcC--ceEEEEE---------EeCCCCccCcEEEEEEEEeCCcc--------c--CCCCCC
Confidence 8 99999999999999999984 5666654 67788888889999988754321 1 123678
Q ss_pred ceEEEEEEchhhHhhccC-----ChhHHHHHHHHH-HHHhcC
Q 021805 266 ELIKVRVVPYRELWRTTP-----DAKVLTAIALYE-MASKEE 301 (307)
Q Consensus 266 E~i~v~wvpleel~~~i~-----D~ktl~al~L~~-~~~~~g 301 (307)
|.+++.|++++++.+++. |+++++|+.++. .++.++
T Consensus 145 E~~~~~w~~~~el~~~~~~~~i~~~~~~~al~~~~~~~~~~~ 186 (198)
T 1vhz_A 145 EPLPQVRWPLAHMMDLLEDPDFNEARNVSALFLVREWLKGQG 186 (198)
T ss_dssp SCCCEEEEEGGGGGGGGGCTTTCBHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEEEHHHHHHHHHcCCCCCHHHHHHHHHHHHHhcccc
Confidence 899999999999999875 788999887665 334444
No 3
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.93 E-value=2.6e-25 Score=194.54 Aligned_cols=165 Identities=21% Similarity=0.318 Sum_probs=124.1
Q ss_pred EEeeEeeecccccEEEEEEEEEE--cCCCcE--EeEEEEEeCCEEEEEEEEecCCceEEEEEEeeecCC------CCeEE
Q 021805 107 LIQGVDMFGKRIGFLKFKADIFC--KETGQK--VPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPT------GRVIL 176 (307)
Q Consensus 107 ~i~~~~~fg~r~~~i~~~~d~~~--~~~G~~--~~~~v~~r~~aVaVl~il~~~g~~~VLLvrQ~R~p~------g~~~w 176 (307)
+|.+..... .+|+++..+.+. .+||.. ..+.++.++++|+|+++.. +++++||++|+|.|. +.+.|
T Consensus 6 ~i~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~r~~~~~~~av~v~~~~~--~~~~vlLv~~~r~~~~~~~~~~~~~w 81 (191)
T 3o6z_A 6 TLIKDKILS--DNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNT--KKKTVVLIRQFRVATWVNGNESGQLI 81 (191)
T ss_dssp EEEEEEEEE--CSSSEEEEEEEEEECTTSCEEEEEEEEEECCCEEEEEEEET--TTTEEEEEEEECHHHHTTTCTTCEEE
T ss_pred EEeEeEEEe--cCcEEEEEEEEEEECCCCCEEEEEEEEEecCCEEEEEEEEC--CCCEEEEEEcCCccccccCCCCCeEE
Confidence 344444443 378888888774 489975 4678899999999998742 234799999999876 77899
Q ss_pred EccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEEEEEEEEechhHHHHHhcc
Q 021805 177 ELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQG 256 (307)
Q Consensus 177 ElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g 256 (307)
++|||++| | |++.+||+||++||||+++. .+..++. +|++++.+++.+++|++....... . +
T Consensus 82 ~lPgG~ve-g-E~~~~aa~REl~EEtG~~~~--~~~~l~~---------~~~~~~~~~~~~~~f~~~~~~~~~-~----~ 143 (191)
T 3o6z_A 82 ESCAGLLD-N-DEPEVCIRKEAIEETGYEVG--EVRKLFE---------LYMSPGGVTELIHFFIAEYSDNQR-A----N 143 (191)
T ss_dssp ECEEEECC-S-SCHHHHHHHHHHHHC-CCCS--CEEEEEE---------EESCTTTBCCEEEEEEEECCTTCC-------
T ss_pred EecceEeC-C-CCHHHHHHHHHHHHhCCccC--cEEEEEE---------EEeCCCccCcEEEEEEEEEccccc-c----c
Confidence 99999999 8 99999999999999999984 5777764 788999999999999987542210 0 0
Q ss_pred CCCccCCCCceEEEEEEchhhHhhccC-----ChhHHHHHHHHH
Q 021805 257 KETGLRDHGELIKVRVVPYRELWRTTP-----DAKVLTAIALYE 295 (307)
Q Consensus 257 ~~~g~~~~~E~i~v~wvpleel~~~i~-----D~ktl~al~L~~ 295 (307)
. .+. .++|.+++.|+|++++.+++. |+++++|++++.
T Consensus 144 ~-~~~-~~~E~~~~~w~~~~el~~~~~~g~i~d~~t~~al~~~~ 185 (191)
T 3o6z_A 144 A-GGG-VEDEAIEVLELPFSQALEMIKTGEIRDGKTVLLLNYLQ 185 (191)
T ss_dssp --------CCSSEEEEEEHHHHHHHHHHSSCCBHHHHHHHHHHH
T ss_pred C-CCC-CCCcEEEEEEEEHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 0 011 267899999999999998764 899998875443
No 4
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.93 E-value=3.7e-24 Score=189.97 Aligned_cols=158 Identities=23% Similarity=0.262 Sum_probs=122.6
Q ss_pred EeeEeeecccccEEEEEEEEEEcCCCcEEeEEEEEe-------CCEEEEEEEEecC-CceEEEEEEeeecCCCCeEEEcc
Q 021805 108 IQGVDMFGKRIGFLKFKADIFCKETGQKVPGIVFAR-------GPAVAVLILLDSE-GETYAILTEQVRVPTGRVILELP 179 (307)
Q Consensus 108 i~~~~~fg~r~~~i~~~~d~~~~~~G~~~~~~v~~r-------~~aVaVl~il~~~-g~~~VLLvrQ~R~p~g~~~wElP 179 (307)
+++..+|. ++|+++..+.+..++|....+.+..| +++|+|++++.++ ++++|||++|+|.+.+.+.|+||
T Consensus 20 ~~~~~~~~--~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~av~v~~v~~~~~~~~~vlLv~q~R~~~~~~~welP 97 (212)
T 2dsc_A 20 ISEELISE--GKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFP 97 (212)
T ss_dssp EEEEEEEE--CSSEEEEEEEEECTTSCEEEEEEEEETTCCTTSCSEEEEEEEEECTTSCCEEEEEEEEEGGGTEEEEECC
T ss_pred eeEEEEee--CCEEEEEEEEEECCCCCEEEEEEEEeeccCCCCCCEEEEEEEEeCCCCCcEEEEEEeecCCCCCcEEECC
Confidence 33445554 68999999999999998877777665 7899999887543 23579999999998877799999
Q ss_pred ceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEEEEEEEEechhHHHHHhccCCC
Q 021805 180 AGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKET 259 (307)
Q Consensus 180 aG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~ 259 (307)
||++|+| |++.+||+||++||||+.+. .+..++ .++.+||.+++.+++|++........ ... ..
T Consensus 98 gG~ve~g-Es~~~aA~REl~EEtGl~~~--~~~~l~---------~~~~~~~~~~~~~~~~~a~~~~~~~~--~~~--~~ 161 (212)
T 2dsc_A 98 AGLIDDG-ETPEAAALRELEEETGYKGD--IAECSP---------AVCMDPGLSNCTIHIVTVTINGDDAE--NAR--PK 161 (212)
T ss_dssp EEECCTT-CCHHHHHHHHHHHHHCCCCE--EEEECC---------CEESCTTTBCCEEEEEEEEEETTSGG--GSS--CC
T ss_pred ccccCCC-CCHHHHHHHHHHHHhCCCcc--ceEEec---------cEEcCCCccCceEEEEEEEEeCcccc--ccC--CC
Confidence 9999998 99999999999999999974 344443 26888999999999998875432110 000 01
Q ss_pred ccCCCCceEEEEEEchhhHhhccC
Q 021805 260 GLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 260 g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
...+++|.+++.|++++++.+++.
T Consensus 162 ~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 162 PKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp CCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred CCCCCCceEEEEEEEHHHHHHHHH
Confidence 234788999999999999998876
No 5
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.92 E-value=2.5e-24 Score=190.41 Aligned_cols=171 Identities=21% Similarity=0.206 Sum_probs=123.2
Q ss_pred EeeEeeecccccEEEEEEEEEEcCCCcEEeEEEEEeCCEEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecC-CC
Q 021805 108 IQGVDMFGKRIGFLKFKADIFCKETGQKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLD-DD 186 (307)
Q Consensus 108 i~~~~~fg~r~~~i~~~~d~~~~~~G~~~~~~v~~r~~aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD-~g 186 (307)
+++..+|. +.|+++..+.+..++|+...+.++.++++|+|+++. ++ ++|||++|+|.+.+...|+||||++| +|
T Consensus 9 ~~~~~~~~--~~~~~~~~~~~~~p~G~~~~~~~~~~~~av~v~i~~-~~--~~vLLvrr~r~~~~~~~w~lPgG~ve~~g 83 (207)
T 1mk1_A 9 ISSETLHT--GAIFALRRDQVRMPGGGIVTREVVEHFGAVAIVAMD-DN--GNIPMVYQYRHTYGRRLWELPAGLLDVAG 83 (207)
T ss_dssp EEEEEEEE--CSSEEEEEEEEC-----CEEEEEEEECCEEEEEECC-TT--SEEEEEEEEETTTTEEEEECCEEECCSTT
T ss_pred EeEEEEEe--CCEEEEEEEEEECCCCCEEEEEEEeCCCEEEEEEEc-CC--CEEEEEEeecCCCCCcEEEeCCccccCCC
Confidence 34445554 679999999998899998888889999999988762 23 47999999999887789999999999 98
Q ss_pred CCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCc
Q 021805 187 KGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGE 266 (307)
Q Consensus 187 ~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E 266 (307)
|++.+||+||++||||+++. .+..++. +|..++..++.+++|++....... .....+++|
T Consensus 84 -Es~~~aa~REl~EEtGl~~~--~~~~l~~---------~~~~~~~~~~~~~~f~~~~~~~~~--------~~~~~~~~E 143 (207)
T 1mk1_A 84 -EPPHLTAARELREEVGLQAS--TWQVLVD---------LDTAPGFSDESVRVYLATGLREVG--------RPEAHHEEA 143 (207)
T ss_dssp -CCHHHHHHHHHHHHHCEEEE--EEEEEEE---------ECSCTTTBCCCEEEEEEEEEEECC--------C--------
T ss_pred -CCHHHHHHHHHHHHHCCccc--ccEEEEE---------EEcCCCccccEEEEEEEEccccCC--------CCCCCCCCc
Confidence 99999999999999999985 4555553 677888888888899886532111 000135778
Q ss_pred eEEEEEEchhhHhhccC-----ChhHHHHHHHHHHHHhcCCC
Q 021805 267 LIKVRVVPYRELWRTTP-----DAKVLTAIALYEMASKEELL 303 (307)
Q Consensus 267 ~i~v~wvpleel~~~i~-----D~ktl~al~L~~~~~~~g~l 303 (307)
.+++.|++++++.+++. |+++++++.++...++.+..
T Consensus 144 ~~~~~Wv~~~el~~~~~~~~i~~~~~~~al~~~~~~~~~~~~ 185 (207)
T 1mk1_A 144 DMTMGWYPIAEAARRVLRGEIVNSIAIAGVLAVHAVTTGFAQ 185 (207)
T ss_dssp --CEEEEEHHHHHHHHHTTSCCCHHHHHHHHHHHHHHTTSCC
T ss_pred eEEEEEEEHHHHHHHHHcCCcCCHHHHHHHHHHHHHhccccC
Confidence 99999999999988764 78899988777666554443
No 6
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.91 E-value=1.4e-24 Score=194.89 Aligned_cols=142 Identities=23% Similarity=0.306 Sum_probs=95.5
Q ss_pred EEcCCCcEEeEEEEEeCCEEEEEEEEecCCceEEEEEEeeecCCC-------------------------------CeEE
Q 021805 128 FCKETGQKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTG-------------------------------RVIL 176 (307)
Q Consensus 128 ~~~~~G~~~~~~v~~r~~aVaVl~il~~~g~~~VLLvrQ~R~p~g-------------------------------~~~w 176 (307)
+..+||+...++++.++++|+|+++.. .++++||++|+|.+.. ++.|
T Consensus 20 ~~~~~G~~~~~e~v~~~~aV~vl~~~~--~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 97 (218)
T 3q91_A 20 FQSMNGAQKSWDFMKTHDSVTVLLFNS--SRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTV 97 (218)
T ss_dssp ---------------CCCEEEEEEEEG--GGTEEEEEEEECHHHHHHHTC-------------------------CCEEE
T ss_pred EECCCCCEEEEEEEEcCCeEEEEEEEC--CCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEE
Confidence 457899999999999999999998742 2347999999998754 6799
Q ss_pred EccceecCC-CCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEEEEEEEEechhHHHHHhc
Q 021805 177 ELPAGMLDD-DKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQ 255 (307)
Q Consensus 177 ElPaG~vD~-g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~ 255 (307)
+||||++|+ | |++.+||+||++||||+++....+..++. +++++|.+++.+++|++....... +
T Consensus 98 elPgG~ve~~g-Es~~eaA~REl~EEtGl~~~~~~l~~l~~---------~~~~~g~~~~~~~~f~a~~~~~~~-~---- 162 (218)
T 3q91_A 98 ELCAGLVDQPG-LSLEEVACKEAWEECGYHLAPSDLRRVAT---------YWSGVGLTGSRQTMFYTEVTDAQR-S---- 162 (218)
T ss_dssp ECEEEECCSSS-CCHHHHHHHHHHHHHCBCCCGGGCEEEEE---------EEEC---CCEEEEEEEEEECGGGB-C----
T ss_pred ECCcceeCCCC-CCHHHHHHHHHHHHhCCccccCceEEEEE---------EecCCCccceEEEEEEEEECCccc-c----
Confidence 999999999 8 99999999999999999986567778764 788899999999999987542210 0
Q ss_pred cCCCccCCCCceEEEEEEchhhHhhccCChh
Q 021805 256 GKETGLRDHGELIKVRVVPYRELWRTTPDAK 286 (307)
Q Consensus 256 g~~~g~~~~~E~i~v~wvpleel~~~i~D~k 286 (307)
....+..+++|.+++.|++++++.+++.+++
T Consensus 163 ~~~~~~~d~~E~~ev~wv~l~el~~~i~~g~ 193 (218)
T 3q91_A 163 GPGGGLVEEGELIEVVHLPLEGAQAFADDPD 193 (218)
T ss_dssp C---------CCEEEEEEEGGGHHHHHHCTT
T ss_pred cCCCCCCCCCcEEEEEEEEHHHHHHHHHcCC
Confidence 0112345788999999999999999987553
No 7
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.90 E-value=4.5e-23 Score=177.66 Aligned_cols=164 Identities=24% Similarity=0.286 Sum_probs=124.4
Q ss_pred EeeEeeecccccEEEEEEEEEEcCCCcE-EeEEEEEeCCEEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCC
Q 021805 108 IQGVDMFGKRIGFLKFKADIFCKETGQK-VPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDD 186 (307)
Q Consensus 108 i~~~~~fg~r~~~i~~~~d~~~~~~G~~-~~~~v~~r~~aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g 186 (307)
+++..+|. +. +++..+.+..++|.. ..+.++.++++|+++++ +.++ ++||++|++.+.+.+.|++|||++|+|
T Consensus 7 ~~~~~~~~--~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~i~-~~~~--~vLL~~r~~~~~~~~~w~~PgG~ve~g 80 (182)
T 2yvp_A 7 ILLEEILS--EP-VRLVKERVRTHTGRELTYVYRPGPVAASFVLPV-TERG--TALLVRQYRHPTGKFLLEVPAGKVDEG 80 (182)
T ss_dssp EEEEEEEC--SS-SCEEEEEEECTTSCEEEEEEBCSSCEEEEEEEB-CTTS--EEEEEEEEEGGGTEEEEECCEEECCTT
T ss_pred eeeEEEEe--Cc-EEEEEEEEECCCCCEeeEEEEEecCCEEEEEEE-cCCC--EEEEEEeccCCCCCcEEEeccccCCCC
Confidence 34555565 34 678888888999998 67777778878877765 2333 699999998876677999999999998
Q ss_pred CCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCc
Q 021805 187 KGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGE 266 (307)
Q Consensus 187 ~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E 266 (307)
|++.+||+||++||||+++. .+..++. ++..++..+..+++|++...... +. ...+++|
T Consensus 81 -Es~~~aa~REl~EEtGl~~~--~~~~l~~---------~~~~~~~~~~~~~~f~~~~~~~~-------~~--~~~~~~E 139 (182)
T 2yvp_A 81 -ETPEAAARRELREEVGAEAE--TLIPLPS---------FHPQPSFTAVVFHPFLALKARVV-------TP--PTLEEGE 139 (182)
T ss_dssp -CCHHHHHHHHHHHHHCEECS--CEEECCC---------BCSCTTTBCCEEEEEEECSCEEC-------SC--CCCCTTC
T ss_pred -cCHHHHHHHHHHHHhCCCcc--cEEEEEE---------EeCCCCccccEEEEEEEeccccC-------CC--CCCCCCc
Confidence 99999999999999999985 4555653 56677777788888887532110 11 1236788
Q ss_pred eEEEEEEchhhHhhccC-----ChhHHHHHHHHHHHH
Q 021805 267 LIKVRVVPYRELWRTTP-----DAKVLTAIALYEMAS 298 (307)
Q Consensus 267 ~i~v~wvpleel~~~i~-----D~ktl~al~L~~~~~ 298 (307)
..++.|++++++.+++. |+++++|+.++..+.
T Consensus 140 ~~~~~W~~~~el~~~~~~~~~~~~~~~~al~~~~~~~ 176 (182)
T 2yvp_A 140 LLESLELPLTEVYALLAKGEIQDASTALTLFYAEPHL 176 (182)
T ss_dssp CEEEEEEEHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred eEEEEEEEHHHHHHHHHcCCcCChHHHHHHHHHHHHH
Confidence 99999999999988764 888988887766443
No 8
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.88 E-value=1.6e-22 Score=168.40 Aligned_cols=130 Identities=25% Similarity=0.282 Sum_probs=97.7
Q ss_pred EeCCEEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCC
Q 021805 142 ARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPS 221 (307)
Q Consensus 142 ~r~~aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~ 221 (307)
.++++|+|+++. .++ ++||++|+|.+.+.+.|++|||++|+| |++.+||+||++||||+++. .+..++.
T Consensus 3 ~~~~~v~vi~~~-~~~--~vLLv~~~r~~~~~~~w~~PgG~ve~g-Et~~~aa~REl~EEtGl~~~--~~~~l~~----- 71 (145)
T 2w4e_A 3 RGPRAVFILPVT-AQG--EAVLIRQFRYPLRATITEIVAGGVEKG-EDLGAAAARELLEEVGGAAS--EWVPLPG----- 71 (145)
T ss_dssp CCCEEEEEEEEE-TTS--EEEEEEEEETTTTEEEEECEEEECCTT-CCHHHHHHHHHHHHHCEECS--EEEECCC-----
T ss_pred eeCCEEEEEEEc-CCC--EEEEEEEEecCCCCCEEEeCCccCCCC-CCHHHHHHHHHHHhhCCccC--eEEEEec-----
Confidence 467788888763 344 599999999887777999999999998 99999999999999999984 4556653
Q ss_pred CCceeecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC-----ChhHHHHHHHHHH
Q 021805 222 TGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP-----DAKVLTAIALYEM 296 (307)
Q Consensus 222 ~~~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~-----D~ktl~al~L~~~ 296 (307)
++++++..++.+++|++....... ...+++|..+++|++++++.+++. |+++++|+.++..
T Consensus 72 ----~~~~~~~~~~~~~~f~~~~~~~~~----------~~~~~~E~~~~~w~~~~el~~~~~~~~~~~~~~~~a~~~~~~ 137 (145)
T 2w4e_A 72 ----FYPQPSISGVVFYPLLALGVTLGA----------AQLEDTETIERVVLPLAEVYRMLEAGEIQDGPSSLTLWQARG 137 (145)
T ss_dssp ----BBSCTTTCCCEEEEEEEEEEEEC------------------CEEEEEEEHHHHHHHHHHTCCCBHHHHHHHHHHHH
T ss_pred ----CcCCCCccCceEEEEEEEecccCC----------CCCCCCCeEEEEEEeHHHHHHHHHcCCcCcHHHHHHHHHHHH
Confidence 677788778888888876432111 123678899999999999988764 8889988876653
No 9
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.86 E-value=4.3e-21 Score=163.67 Aligned_cols=152 Identities=27% Similarity=0.361 Sum_probs=109.3
Q ss_pred eeEeeecccccEEEEEEEEEEcCCCcEEeEEEEEeCCEEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCC
Q 021805 109 QGVDMFGKRIGFLKFKADIFCKETGQKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKG 188 (307)
Q Consensus 109 ~~~~~fg~r~~~i~~~~d~~~~~~G~~~~~~v~~r~~aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~E 188 (307)
++..+|. ++|+++..+ ..+.+..++++|+++++ +++ ++||++|+|.+.+...|++|||++|+| |
T Consensus 10 ~~~~~~~--~~~~~v~~~---------~~~~~~~~~~~v~vii~--~~~--~vLL~~~~r~~~~~~~w~lPgG~ve~g-E 73 (170)
T 1v8y_A 10 ERTYLYR--GRILNLALE---------GRYEIVEHKPAVAVIAL--REG--RMLFVRQMRPAVGLAPLEIPAGLIEPG-E 73 (170)
T ss_dssp -CEEEEE--CSSEEEEEE---------TTEEEEEECCEEEEEEE--ETT--EEEEEECCBTTTTBCCBBCSEEECCTT-C
T ss_pred eEEEEEE--CCeEEEEEE---------eeEEEEecCCeEEEEEE--ECC--EEEEEEEEeCCCCCCEEECCccccCCC-C
Confidence 4445554 578777655 23456667788888876 344 699999999876667899999999998 9
Q ss_pred CHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceE
Q 021805 189 DFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELI 268 (307)
Q Consensus 189 t~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i 268 (307)
++.+||+||++||||+ + ..+..++. ++..++..+..+++|++...... ....+++|..
T Consensus 74 s~~~aa~REl~EEtGl-~--~~~~~l~~---------~~~~~~~~~~~~~~f~~~~~~~~----------~~~~~~~E~~ 131 (170)
T 1v8y_A 74 DPLEAARRELAEQTGL-S--GDLTYLFS---------YFVSPGFTDEKTHVFLAENLKEV----------EAHPDEDEAI 131 (170)
T ss_dssp CHHHHHHHHHHHHHSE-E--EEEEEEEE---------EESCTTTBCCEEEEEEEEEEEEC----------C--------C
T ss_pred CHHHHHHHHHHHHHCC-C--cCceeeEE---------EecCCCccccEEEEEEEEecccc----------CCCCCCCceE
Confidence 9999999999999999 6 35666654 56777777788888888653211 0123567889
Q ss_pred EEEEEchhhHhhcc-----C-ChhHHHHHHHHHHHH
Q 021805 269 KVRVVPYRELWRTT-----P-DAKVLTAIALYEMAS 298 (307)
Q Consensus 269 ~v~wvpleel~~~i-----~-D~ktl~al~L~~~~~ 298 (307)
++.|++++++.+++ . |+++++|+.+|...+
T Consensus 132 ~~~W~~~~el~~~~~~~~~~~~~~~~~al~~~~~~~ 167 (170)
T 1v8y_A 132 EVVWMRPEEALERHQRGEVEFSATGLVGVLYYHAFL 167 (170)
T ss_dssp EEEEECHHHHHHHHHTTSCCBCHHHHHHHHHHHHHC
T ss_pred EEEEEEHHHHHHHHHCCCEecCHHHHHHHHHHHHHh
Confidence 99999999998875 4 788999887776544
No 10
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.72 E-value=2.2e-16 Score=130.88 Aligned_cols=123 Identities=16% Similarity=0.068 Sum_probs=81.4
Q ss_pred eCCEEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCC
Q 021805 143 RGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPST 222 (307)
Q Consensus 143 r~~aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~ 222 (307)
++.+|.|+++...+++.+|||+++.+. ..|++|||++|+| |++.+||+||++||||+++... ...+..+.. .
T Consensus 4 ~~~~v~vvi~~~~~~~~~vLl~~r~~~----g~w~~PgG~ve~g-E~~~~aa~REl~EEtGl~~~~~-~~~~~~~~~--~ 75 (149)
T 3son_A 4 QPFQVLVIPFIKTEANYQFGVLHRTDA----DVWQFVAGGGEDE-EAISETAKRESIEELNLDVDVK-MYSLDSHAS--I 75 (149)
T ss_dssp CCCEEEEEEEEECSSSEEEEEEEESSS----SCEECEEEECCTT-CCHHHHHHHHHHHHHTCCSCCC-EEEEEEEEE--E
T ss_pred CceEEEEEEEEecCCCeEEEEEEEcCC----CCEeCCccccCCC-CCHHHHHHHHHHHHhCCCcccc-eEEEEeeec--c
Confidence 456777776654455568999877653 4699999999998 9999999999999999998642 111211000 0
Q ss_pred CceeecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 223 GCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 223 ~~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
....|..++......++|.+....... .. ...+|..+++|++++++.+++.
T Consensus 76 ~~~~~~~~~~~~~~~~~f~~~~~~~~~-------~~---~~~~E~~~~~W~~~~el~~~~~ 126 (149)
T 3son_A 76 PNFHFSFNKPYVVPEYCFAIDLTSCSY-------QV---TLSLEHSELRWVSYESAIQLLE 126 (149)
T ss_dssp EGGGTCSSSCSEEEEEEEEEECTTTGG-------GC---CCCTTEEEEEEECHHHHHHHCC
T ss_pred cceeeccCCceEeEEEEEEEEcCCCCC-------cc---cCCCceeeEEEeCHHHHHHHhc
Confidence 001233344455566777775431111 11 1247899999999999999876
No 11
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.71 E-value=2.1e-16 Score=131.32 Aligned_cols=109 Identities=24% Similarity=0.279 Sum_probs=76.9
Q ss_pred EEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCce
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCK 225 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~ 225 (307)
.+++.+++.+++ +|||++|.+ .+...|++|||++|+| |++.+||+||++||||+++....+....
T Consensus 5 ~~~v~~ii~~~~--~vLl~~r~~--~~~~~w~~PgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~~~~~~---------- 69 (153)
T 3shd_A 5 HVTVACVVHAEG--KFLVVEETI--NGKALWNQPAGHLEAD-ETLVEAAARELWEETGISAQPQHFIRMH---------- 69 (153)
T ss_dssp EEEEEEEEEETT--EEEEEEEEE--TTEEEEECSEEECCTT-CCHHHHHHHHHHHHHCCCCCCCEEEEEE----------
T ss_pred ceEEEEEEEeCC--EEEEEEecC--CCCCCEECCeEEeCCC-CCHHHHHHHHHHHHHCcccccCcEEEEE----------
Confidence 344444444444 699988763 3456899999999998 9999999999999999998654333322
Q ss_pred eecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHh
Q 021805 226 FFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELW 279 (307)
Q Consensus 226 ~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~ 279 (307)
.+..++......++|.+..... .....+++|..+++|++++++.
T Consensus 70 ~~~~~~~~~~~~~~f~~~~~~~----------~~~~~~~~E~~~~~W~~~~el~ 113 (153)
T 3shd_A 70 QWIAPDKTPFLRFLFAIELEQI----------CPTQPHDSDIDCCRWVSAEEIL 113 (153)
T ss_dssp EECCTTSCCEEEEEEEEECSSC----------CCCCCCSTTCCEEEEECHHHHH
T ss_pred EEecCCCceEEEEEEEEEcccc----------CcCCCCcccceeeEEecHHHhh
Confidence 3556666666667777764321 0113467789999999999993
No 12
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.71 E-value=2e-16 Score=137.43 Aligned_cols=121 Identities=17% Similarity=0.182 Sum_probs=80.9
Q ss_pred cCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccc
Q 021805 155 SEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCD 234 (307)
Q Consensus 155 ~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~ 234 (307)
+++ +|||++|.+.+. ...|+||||++|+| |++.+||+||++||||+++....+.. ++..++. +
T Consensus 49 ~~~--~vLL~~r~~~~~-~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~~~~------------~~~~~~~-~ 111 (189)
T 3cng_A 49 WEN--KVLLCKRAIAPY-RGKWTLPAGFMENN-ETLVQGAARETLEEANARVEIRELYA------------VYSLPHI-S 111 (189)
T ss_dssp ETT--EEEEEEESSSSS-TTCEECSEEECCTT-CCHHHHHHHHHHHHHCCCEEEEEEEE------------EEEEGGG-T
T ss_pred eCC--EEEEEEccCCCC-CCeEECceeeccCC-CCHHHHHHHHHHHHHCCccccceeEE------------EEecCCC-c
Confidence 444 699999887654 44799999999998 99999999999999999985333222 3333333 5
Q ss_pred eEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHh-hccCChhHHHHHHHHHHHHhcCCCC
Q 021805 235 EEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELW-RTTPDAKVLTAIALYEMASKEELLP 304 (307)
Q Consensus 235 e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~-~~i~D~ktl~al~L~~~~~~~g~lp 304 (307)
..+++|++.... +. ...++|..++.|++++++. ..+.......++..|...++.|.+|
T Consensus 112 ~~~~~f~~~~~~---------~~---~~~~~E~~~~~W~~~~el~~~~l~~~~~~~~l~~~l~~~~~~~~~ 170 (189)
T 3cng_A 112 QVYMLFRAKLLD---------LD---FFPGIESLEVRLFGEQEIPWNDIAFRVIHDPLKRYMEERHHGQPA 170 (189)
T ss_dssp EEEEEEEEEECC---------SC---CCCCTTEEEEEEECTTTCCGGGBSCHHHHHHHHHHHHHHHHSSCC
T ss_pred EEEEEEEEEeCC---------Cc---cCCCccceeEEEECHHHcCcccccChHHHHHHHHHHHhccCCCcc
Confidence 667778776531 11 1246788999999999997 3333333333444444444445444
No 13
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.70 E-value=1.5e-16 Score=131.83 Aligned_cols=112 Identities=20% Similarity=0.184 Sum_probs=75.6
Q ss_pred EEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCce
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCK 225 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~ 225 (307)
.+++.+++.+++ +|||++|.+.+. ...|++|||++|+| |++.+||+||++||||+++.... .++. .
T Consensus 8 ~~~v~~ii~~~~--~vLl~~r~~~~~-~~~w~lPgG~ve~g-E~~~~aa~RE~~EEtGl~~~~~~--~~~~--------~ 73 (153)
T 2b0v_A 8 NVTVAAVIEQDD--KYLLVEEIPRGT-AIKLNQPAGHLEPG-ESIIQACSREVLEETGHSFLPEV--LTGI--------Y 73 (153)
T ss_dssp EEEEEEECEETT--EEEEEEECSSSS-CCEEECSEEECCTT-SCHHHHHHHHHHHHHSEEEEEEE--EEEE--------E
T ss_pred CEEEEEEEeeCC--EEEEEEEcCCCC-CCeEECCCcCcCCC-CCHHHHHHHHHHHhhCcEeccce--EEEE--------E
Confidence 333443343444 699998887654 56899999999998 99999999999999999986433 3332 1
Q ss_pred eecCCC-ccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhc
Q 021805 226 FFPSAG-GCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRT 281 (307)
Q Consensus 226 ~~~spg-~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~ 281 (307)
.|..++ .....+++|.+...... . ....++|..++.|++++++.++
T Consensus 74 ~~~~~~~~~~~~~~~f~~~~~~~~---------~-~~~~~~e~~~~~W~~~~el~~~ 120 (153)
T 2b0v_A 74 HWTCASNGTTYLRFTFSGQVVSFD---------P-DRKLDTGIVRAAWFSIDEIRAK 120 (153)
T ss_dssp EEEETTTTEEEEEEEEEEEEEEEC---------T-TSCCCTTEEEEEEEEHHHHHHT
T ss_pred EEeCCCCCcEEEEEEEEEEeCCCC---------C-CCCCCCCeeeEEEecHHHHhhh
Confidence 233443 22334455666543210 0 0235678899999999999986
No 14
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.69 E-value=1.7e-16 Score=132.50 Aligned_cols=109 Identities=20% Similarity=0.171 Sum_probs=76.9
Q ss_pred eEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEE
Q 021805 159 TYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEIS 238 (307)
Q Consensus 159 ~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~ 238 (307)
++|||+++.+.+ ....|++|||++|.| |++.+||+||++||||+++.. +..++. +...+ ....+
T Consensus 32 ~~vLl~~r~~~~-~~~~w~~PgG~ve~g-E~~~~aa~REl~EEtGl~~~~--~~~~~~---------~~~~~---~~~~~ 95 (156)
T 3gg6_A 32 DEVLLIQEAKRE-CRGSWYLPAGRMEPG-ETIVEALQREVKEEAGLHCEP--ETLLSV---------EERGP---SWVRF 95 (156)
T ss_dssp SEEEEEECCCTT-STTCEECSEEECCTT-CCHHHHHHHHHHHHHCEEEEE--EEEEEE---------EESST---TEEEE
T ss_pred CEEEEEEecCCC-CCCEEECCeeeccCC-CCHHHHHHHHHHHhhCceeEe--eeEEEE---------EcCCC---CEEEE
Confidence 479999988765 445799999999998 999999999999999999853 333332 22222 33556
Q ss_pred EEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCChhHHHHH
Q 021805 239 LFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAKVLTAI 291 (307)
Q Consensus 239 lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D~ktl~al 291 (307)
+|++....... .....+++|..++.|++++++.+++.++....++
T Consensus 96 ~f~~~~~~~~~--------~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l 140 (156)
T 3gg6_A 96 VFLARPTGGIL--------KTSKEADAESLQAAWYPRTSLPTPLRAHDILHLV 140 (156)
T ss_dssp EEEEEEEEECC--------CCGGGCSSSCSEEEEEETTSCCSSBSCTHHHHHH
T ss_pred EEEEEeeCCee--------ccCCCCCcceeeeEEEcHHHCcccccchhHHHHH
Confidence 67765432110 0111256788999999999999999877754333
No 15
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.69 E-value=3.7e-16 Score=130.27 Aligned_cols=103 Identities=19% Similarity=0.232 Sum_probs=72.3
Q ss_pred EEEEEEeee---cCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceE
Q 021805 160 YAILTEQVR---VPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEE 236 (307)
Q Consensus 160 ~VLLvrQ~R---~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~ 236 (307)
++||++|.+ .+.....|++|||++|.| |++.+||+||++||||+.+.. +..++.+ .+..+.+....
T Consensus 26 ~vLl~~r~~~~~~~~~~~~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~~--~~~l~~~--------~~~~~~~~~~~ 94 (159)
T 1sjy_A 26 DILLVQEKGIPGHPEKAGLWHIPSGAVEDG-ENPQDAAVREACEETGLRVRP--VKFLGAY--------LGRFPDGVLIL 94 (159)
T ss_dssp CEEEEEESCC----CCCCCEECSEEECCTT-SCHHHHHHHHHHHHHSCCEEE--EEEEEEE--------EEECTTSCEEE
T ss_pred CEEEEEecccCcCCCCCCeEECCccccCCC-CCHHHHHHHHHHHHHCcccee--eEEEEEE--------ecccCCCceEE
Confidence 599998887 333456899999999998 999999999999999999853 3444321 11122224566
Q ss_pred EEEEEEEEechhHHHHHhccCCCccC-CCCceEEEEEEchhhHhhccC
Q 021805 237 ISLFLYRGRVDKEIIMQLQGKETGLR-DHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 237 i~lf~~~~~~~~~~i~~~~g~~~g~~-~~~E~i~v~wvpleel~~~i~ 283 (307)
+++|.+.... +... .. +++|..++.|++++++.+++.
T Consensus 95 ~~~f~~~~~~---------~~~~-~~~~~~E~~~~~W~~~~el~~~~~ 132 (159)
T 1sjy_A 95 RHVWLAEPEP---------GQTL-APAFTDEIAEASFVSREDFAQLYA 132 (159)
T ss_dssp EEEEEEEECS---------SCCC-CCCCCSSEEEEEEECHHHHHHHHH
T ss_pred EEEEEEEccC---------CCcc-ccCCCCceeEEEEecHHHHHHhhh
Confidence 7777776421 1100 12 567889999999999988865
No 16
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.69 E-value=6.2e-16 Score=126.68 Aligned_cols=100 Identities=23% Similarity=0.373 Sum_probs=71.6
Q ss_pred EEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCc---cceEE
Q 021805 161 AILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGG---CDEEI 237 (307)
Q Consensus 161 VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~---~~e~i 237 (307)
+||++|.+.+.+ |++|||++|+| |++.+||+||++||||+.+.... .++ .+..+.. ....+
T Consensus 27 vLl~~r~~~~~~---w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~~~~--~~~----------~~~~~~~~~~~~~~~ 90 (139)
T 2yyh_A 27 IVLIERKYPPVG---LALPGGFVEVG-ERVEEAAAREMREETGLEVRLHK--LMG----------VYSDPERDPRAHVVS 90 (139)
T ss_dssp EEEEEECSSSCS---EECCEEECCTT-CCHHHHHHHHHHHHHCCCCEEEE--EEE----------EECCTTSCTTSCEEE
T ss_pred EEEEEecCCCCc---EECccccCCCC-CCHHHHHHHHHHHHHCCCcccce--EEE----------EECCCCcCCCceEEE
Confidence 999888775432 99999999998 99999999999999999985332 232 2333221 34455
Q ss_pred EEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHh--hccCChhHHH
Q 021805 238 SLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELW--RTTPDAKVLT 289 (307)
Q Consensus 238 ~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~--~~i~D~ktl~ 289 (307)
++|.+.. . +. ....+|..++.|++++++. ++..+.+.+.
T Consensus 91 ~~f~~~~--~--------~~---~~~~~e~~~~~W~~~~el~~~~l~~~~~~~l 131 (139)
T 2yyh_A 91 VVWIGDA--Q--------GE---PKAGSDAKKVKVYRLEEIPLDKLVFDHKKII 131 (139)
T ss_dssp EEEEEEE--E--------SC---CCCCTTEEEEEEECTTSCCGGGBCTTHHHHH
T ss_pred EEEEEec--C--------Cc---cCCCCCcceEEEEEHHHCCHhhcCCCHHHHH
Confidence 6677654 1 11 1246788999999999999 7777765543
No 17
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.69 E-value=2.9e-16 Score=137.42 Aligned_cols=124 Identities=19% Similarity=0.243 Sum_probs=75.7
Q ss_pred EEeCCEEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccC
Q 021805 141 FARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYP 220 (307)
Q Consensus 141 ~~r~~aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~ 220 (307)
..+.-+|+++++. ++ .++|||+++ +.+. ...|++|||++|+| |++.+||+||++||||+++...++..+.
T Consensus 23 ~~~~v~v~~~v~~-~~-~~~vLL~~r-~~~~-~g~w~lPGG~ve~g-Es~~~aA~REl~EEtGl~~~~~~l~~~~----- 92 (199)
T 3h95_A 23 MSHQVGVAGAVFD-ES-TRKILVVQD-RNKL-KNMWKFPGGLSEPE-EDIGDTAVREVFEETGIKSEFRSVLSIR----- 92 (199)
T ss_dssp ---CCEEEEEEEE-TT-TTEEEEEEE-SSSS-TTSBBCCEEECCTT-CCHHHHHHHHHHHHHCCCEEEEEEEEEE-----
T ss_pred CcccceEEEEEEe-CC-CCEEEEEEE-cCCC-CCCEECCccccCCC-CCHHHHHHHHHHHHhCCccccceEEEEE-----
Confidence 3444566666553 22 236877755 4443 34799999999998 9999999999999999998644443332
Q ss_pred CCCceeecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCChhH
Q 021805 221 STGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAKV 287 (307)
Q Consensus 221 ~~~~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D~kt 287 (307)
..+..++.......+|++..... ......+++|..++.|++++++.++...+..
T Consensus 93 ----~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~ 146 (199)
T 3h95_A 93 ----QQHTNPGAFGKSDMYIICRLKPY---------SFTINFCQEECLRCEWMDLNDLAKTENTTPI 146 (199)
T ss_dssp ----ECC---------CEEEEEEEEES---------CCCCCCCTTTEEEEEEEEHHHHHHCSSBCHH
T ss_pred ----eeecCCCCceeEEEEEEEEEcCC---------CcccCCCccceeeeEEEeHHHHhhhhhcChH
Confidence 13556665444444455443211 1112346789999999999999988764443
No 18
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.69 E-value=2.1e-16 Score=130.26 Aligned_cols=108 Identities=19% Similarity=0.308 Sum_probs=71.7
Q ss_pred EEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCce
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCK 225 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~ 225 (307)
+++++++ +++ +|||+++. ...|+||||++|+| |++.+||+||++||||+++.. +..++.. ..
T Consensus 6 aag~vv~--~~~--~vLL~~r~-----~g~W~~PgG~ve~g-Et~~~aa~RE~~EEtGl~~~~--~~~l~~~------~~ 67 (134)
T 3i7u_A 6 SAGGVLF--KDG--EVLLIKTP-----SNVWSFPKGNIEPG-EKPEETAVREVWEETGVKGEI--LDYIGEI------HY 67 (134)
T ss_dssp EEEEEEE--ETT--EEEEEECT-----TSCEECCEEECCTT-CCHHHHHHHHHHHHHSEEEEE--EEEEEEE------EE
T ss_pred EEEEEEE--ECC--EEEEEEeC-----CCcEECCeeEecCC-CCHHHHHHHHHHHhcCceEEE--eeeeeee------eE
Confidence 4444544 455 59888652 23699999999998 999999999999999999854 3333321 11
Q ss_pred eecCCCcc-ceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 226 FFPSAGGC-DEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 226 ~~~spg~~-~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
.|+..+.. ...+++|++.... +. ....+|..+++|++++|+.+++.
T Consensus 68 ~~~~~~~~~~~~~~~f~~~~~~---------~~---~~~~~E~~~~~W~~~~e~~~~l~ 114 (134)
T 3i7u_A 68 WYTLKGERIFKTVKYYLMKYKE---------GE---PRPSWEVKDAKFFPIKEAKKLLK 114 (134)
T ss_dssp EEEETTEEEEEEEEEEEEEEEE---------EC---CCCCTTSSEEEEEEHHHHHHHBC
T ss_pred EecCCCceEEEEEEEEEEEEcC---------Cc---CcCChhheEEEEEEHHHHhhhcC
Confidence 33333332 2334556665421 11 12346788999999999999876
No 19
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.68 E-value=3.9e-16 Score=131.30 Aligned_cols=114 Identities=18% Similarity=0.193 Sum_probs=76.3
Q ss_pred EEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCcee
Q 021805 147 VAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKF 226 (307)
Q Consensus 147 VaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~ 226 (307)
+++.+++.+++ +|||+++.+.+ ....|+||||++|+| |++.+||+||++||||+++....+..... ..
T Consensus 30 ~~v~~vi~~~~--~vLL~~r~~~~-~~~~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~~~~~~~--------~~ 97 (157)
T 4dyw_A 30 VGCGAAIVRDG--RILLIKRKRAP-EAGCWGLPGGKVDWL-EPVERAVCREIEEELGIALERATLLCVVD--------HI 97 (157)
T ss_dssp EEEEEEEEETT--EEEEEEECSSS-STTCEECCEEECCTT-CCHHHHHHHHHHHHHSCEEESCEEEEEEE--------EE
T ss_pred eEEEEEEEECC--EEEEEEecCCC-CCCEEECCcccCCCC-CCHHHHHHHHHHHHHCcccccCcEEEEEE--------ee
Confidence 33333333444 69999988766 556899999999998 99999999999999999986443333221 12
Q ss_pred ecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 227 FPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 227 ~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
+.. ......+.+|++..... ... ..+++|..+++|++++++.+.+.
T Consensus 98 ~~~-~~~~~~~~~f~~~~~~~---------~~~-~~~~~E~~~~~W~~~~el~~~l~ 143 (157)
T 4dyw_A 98 DAA-NGEHWVAPVYLAHAFSG---------EPR-VVEPDRHEALGWFALDDLPQPLT 143 (157)
T ss_dssp ETT-TTEEEEEEEEEESEEES---------CCC-CSCTTTEEEEEEEETTSCCSSBC
T ss_pred ccC-CCcEEEEEEEEEEEcCC---------Ccc-cCCCCcEeEEEEECHHHcccccC
Confidence 222 22334455666543211 111 23567899999999999998654
No 20
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.68 E-value=1.4e-15 Score=123.90 Aligned_cols=114 Identities=16% Similarity=0.159 Sum_probs=76.5
Q ss_pred EEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCccccccee--eccccccCCCC
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMI--DLTAFLYPSTG 223 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~--~L~~l~~~~~~ 223 (307)
+|+++++..++++.+|||+++. . +...|++|||++|+| |++.+||+||++||||+.+....+. .++.
T Consensus 5 ~~~~vi~~~~~~~~~vLl~~r~-~--~~~~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~------- 73 (138)
T 1ktg_A 5 AAGLVIYRKLAGKIEFLLLQAS-Y--PPHHWTPPKGHVDPG-EDEWQAAIRETKEEANITKEQLTIHEDCHET------- 73 (138)
T ss_dssp EEEEEEEEEETTEEEEEEEEES-S--TTCCEESSEEECCTT-CCHHHHHHHHHHHHHCCCGGGEEEEEEEEEE-------
T ss_pred EEEEEEEEecCCCcEEEEEEcc-C--CCCcEeCCccccCCC-CCHHHHHHHHHHHHHCCCccceEEeccccce-------
Confidence 4556655433444578887753 2 345799999999998 9999999999999999976432222 1111
Q ss_pred ceeecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 224 CKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 224 ~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
..|..++ ....+++|++..... ....+++|..++.|++++++.++..
T Consensus 74 -~~~~~~~-~~~~~~~f~~~~~~~-----------~~~~~~~e~~~~~W~~~~el~~~~~ 120 (138)
T 1ktg_A 74 -LFYEAKG-KPKSVKYWLAKLNNP-----------DDVQLSHEHQNWKWCELEDAIKIAD 120 (138)
T ss_dssp -EEEEETT-EEEEEEEEEEEECSC-----------CCCCCCTTEEEEEEECHHHHHHHHC
T ss_pred -EEEEeCC-CceEEEEEEEEecCC-----------cccCCCchhcEeEeccHHHHHHhhc
Confidence 1233332 345666777654321 0123577899999999999999876
No 21
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.67 E-value=1.3e-15 Score=127.74 Aligned_cols=107 Identities=19% Similarity=0.135 Sum_probs=69.5
Q ss_pred CCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccce
Q 021805 156 EGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDE 235 (307)
Q Consensus 156 ~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e 235 (307)
+++.++||+++.+ +...|++|||++|+| |++.+||+||++||||+++....+...... ...|. +.....
T Consensus 21 n~~~e~LL~~r~~---~~~~W~lPgG~ve~g-Et~~~aa~REl~EEtGl~~~~~~~~~~~~~------~~~~~-~~~~~~ 89 (155)
T 3u53_A 21 NNAIEFLLLQASD---GIHHWTPPKGHVEPG-EDDLETALRETQEEAGIEAGQLTIIEGFKR------ELNYV-ARNKPK 89 (155)
T ss_dssp SCSEEEEEEEESS---SSCCEECSEEECCSS-CCHHHHHHHHHHHHHCCCGGGEEEEEEEEE------EEEEE-ETTEEE
T ss_pred CCCcEEEEEEecC---CCCCEECCeeeccCC-CCHHHHHHHHHHHHHCCccccceeeeeEee------eeecC-CCccee
Confidence 4556788886543 234699999999998 999999999999999999864332221110 01122 222233
Q ss_pred EEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 236 EISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 236 ~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
...+|++...... +. ....+|..+++|++++|+.+++.
T Consensus 90 ~~~~~~~~~~~~~-------~~---~~~~~E~~~~~W~~~~ea~~~~~ 127 (155)
T 3u53_A 90 TVIYWLAEVKDYD-------VE---IRLSHEHQAYRWLGLEEACQLAQ 127 (155)
T ss_dssp EEEEEEEEESCTT-------CC---CCCCTTEEEEEEECHHHHHHHHC
T ss_pred EEEEEEEEEeccC-------Cc---cCCCcceeEEEEeEHHHHHHHcC
Confidence 4445555443211 11 23456889999999999998876
No 22
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.67 E-value=2.4e-16 Score=145.38 Aligned_cols=116 Identities=21% Similarity=0.227 Sum_probs=77.6
Q ss_pred CCEEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCC
Q 021805 144 GPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTG 223 (307)
Q Consensus 144 ~~aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~ 223 (307)
.++|+++++ ++..++|||++|++.+ ..|++|||++|+| |++.+||+||++||||+++.. +..+.
T Consensus 101 v~~v~avv~--~~~~~~vLLv~r~~~~---g~W~lPgG~ve~g-Es~~eAA~REl~EEtGl~~~~--l~~~~-------- 164 (271)
T 2a6t_A 101 IPVRGAIML--DMSMQQCVLVKGWKAS---SGWGFPKGKIDKD-ESDVDCAIREVYEETGFDCSS--RINPN-------- 164 (271)
T ss_dssp CCEEEEEEB--CSSSSEEEEEEESSTT---CCCBCSEEECCTT-CCHHHHHHHHHHHHHCCCCTT--TCCTT--------
T ss_pred CCeEEEEEE--ECCCCEEEEEEEeCCC---CeEECCcccCCCC-cCHHHHHHHHHHHHhCCCcee--eeeee--------
Confidence 345666654 3323479999987743 4699999999998 999999999999999999853 43332
Q ss_pred ceeecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCCh
Q 021805 224 CKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDA 285 (307)
Q Consensus 224 ~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D~ 285 (307)
.|.+++..++.+++|++...... +. ....+++|..+++|++++++.++..++
T Consensus 165 --~~~~~~~~~~~~~~f~~~~~~~~-------~~-~~~~~~~E~~~~~W~~~~el~~~~~~~ 216 (271)
T 2a6t_A 165 --EFIDMTIRGQNVRLYIIPGISLD-------TR-FESRTRKEISKIEWHNLMDLPTFKKNK 216 (271)
T ss_dssp --CEEEEEETTEEEEEEEECCCCTT-------CC-CC------EEEEEEEEGGGSTTCC---
T ss_pred --eeccCCcCCceEEEEEEEEecCc-------cc-CCCCCccceeEEEEEEHHHHHHHHhcC
Confidence 45555666677888877643211 10 012356789999999999999887654
No 23
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.66 E-value=1.8e-15 Score=124.17 Aligned_cols=99 Identities=14% Similarity=0.097 Sum_probs=68.6
Q ss_pred EEEEEEeeecCC--CCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEE
Q 021805 160 YAILTEQVRVPT--GRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEI 237 (307)
Q Consensus 160 ~VLLvrQ~R~p~--g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i 237 (307)
+|||+++.+.+. ....|+||||.+|+| |++.+||+||++||||+++.. +..++.+ .+..+ .....+
T Consensus 18 ~vLL~~r~~~~~~~~~g~w~lPgG~ve~g-E~~~~aa~REl~EE~Gl~~~~--~~~~~~~--------~~~~~-~~~~~~ 85 (140)
T 3gwy_A 18 KYLCVQRGQTKFSYTSFRYEFPGGKVEEG-ESLQEALQREIMEEMDYVIEV--GEKLLTV--------HHTYP-DFEITM 85 (140)
T ss_dssp EEEEEEC---------CCEECSEEECCTT-CCHHHHHHHHHHHHHCCCEEE--EEEEEEE--------ECCCS-SCCEEE
T ss_pred EEEEEEecCCCCCCCCCeEECCCccCCCC-CCHHHHHHHHHHHhhCcEEEe--ceEEEEE--------EEEeC-CceEEE
Confidence 699998887664 556899999999998 999999999999999999853 3334321 22222 345566
Q ss_pred EEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 238 SLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 238 ~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
++|.+.... + ....+|..++.|++++++.++..
T Consensus 86 ~~f~~~~~~---------~----~~~~~E~~~~~W~~~~el~~~~~ 118 (140)
T 3gwy_A 86 HAFLCHPVG---------Q----RYVLKEHIAAQWLSTREMAILDW 118 (140)
T ss_dssp EEEEEEECC---------S----CCCCCSSCEEEEECHHHHTTSCB
T ss_pred EEEEEEecC---------C----cccccccceeEeccHHHHhhCCC
Confidence 777775431 1 23456888999999999998765
No 24
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.65 E-value=7.8e-16 Score=133.17 Aligned_cols=118 Identities=16% Similarity=0.115 Sum_probs=74.8
Q ss_pred ceEEEEEEeeec------CCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCC
Q 021805 158 ETYAILTEQVRV------PTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAG 231 (307)
Q Consensus 158 ~~~VLLvrQ~R~------p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg 231 (307)
+++|||+++.+. +.....|++|||++|+| |++.+||+||++||||+++. .+..++ .+..+.
T Consensus 45 ~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~g-Es~~~aa~REl~EEtGl~~~--~~~~l~----------~~~~~~ 111 (187)
T 3i9x_A 45 TLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDEN-ESAEQAAERELEEETSLTDI--PLIPFG----------VFDKPG 111 (187)
T ss_dssp EEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTT-SCHHHHHHHHHHHHHCCCSC--CCEEEE----------EECCTT
T ss_pred CCEEEEEEEccccccccCCCCCCEEECCceeCCCC-CCHHHHHHHHHHHHHCCCCc--ceEEEE----------EEcCCc
Confidence 468999988642 33455899999999998 99999999999999999885 344443 233332
Q ss_pred cc---ceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhc--cCChhHHHHHHHHHHH
Q 021805 232 GC---DEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRT--TPDAKVLTAIALYEMA 297 (307)
Q Consensus 232 ~~---~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~--i~D~ktl~al~L~~~~ 297 (307)
.. .....+|++......... ....+|..++.|++++++.++ ..+.+.+...++-.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~E~~~~~W~~~~el~~~~l~~~~~~il~~a~~~l~ 173 (187)
T 3i9x_A 112 RDPRGWIISRAFYAIVPPEALEK---------RAAGDDAAEIGLFPMTEALELPLAFDHLDMLKKAFSAIT 173 (187)
T ss_dssp SSTTSSEEEEEEEEECCHHHHHH---------HHHSTTTTTEEEEEHHHHTTSCBSTTHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEEEEEEcCcccCC---------cCCCCceeEEEEEeHHHcccCCCCccHHHHHHHHHHHHH
Confidence 21 223344544332221110 013456667999999999864 4466665554444433
No 25
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.64 E-value=2.1e-15 Score=123.70 Aligned_cols=101 Identities=18% Similarity=0.143 Sum_probs=71.8
Q ss_pred EEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEEE
Q 021805 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISL 239 (307)
Q Consensus 160 ~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~l 239 (307)
+|||+++.+.+...+.|+||||.+|.| |++.+||+||++||||+.+...++..+... .+.. +.....+++
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~g-E~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~--------~~~~-~~~~~~~~~ 90 (144)
T 3r03_A 21 RVLLAQRPPGKSLAGLWEFPGGKLEPG-ETPEAALVRELAEELGVDTRASCLAPLAFA--------SHSY-DTFHLLMPL 90 (144)
T ss_dssp CEEEEECCTTSSSTTCEECSEEECCTT-CCHHHHHHHHHHHHHCCBCCGGGCEEEEEE--------EEEC-SSSEEEEEE
T ss_pred EEEEEEeCCCCCCCCcEECCCcEecCC-CCHHHHHHHHHHHHhCceeeccceEEEEee--------eccC-CCeEEEEEE
Confidence 588888765544456899999999998 999999999999999999976555555321 2222 223445566
Q ss_pred EEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 240 FLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 240 f~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
|.+.... + .....|..++.|++++++.++..
T Consensus 91 ~~~~~~~---------~----~~~~~e~~~~~W~~~~el~~~~~ 121 (144)
T 3r03_A 91 YACRSWR---------G----RATAREGQTLAWVRAERLREYPM 121 (144)
T ss_dssp EEECCCB---------S----CCCCCSSCEEEEECGGGGGGSCC
T ss_pred EEEEecC---------C----ccCCCCcceEEEEeHHHhccCCC
Confidence 6554321 1 23456778999999999998765
No 26
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.64 E-value=1.3e-15 Score=123.16 Aligned_cols=108 Identities=19% Similarity=0.297 Sum_probs=74.2
Q ss_pred EEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCce
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCK 225 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~ 225 (307)
+|+++++ +++ +|||+++.+ ..|++|||++|+| |++.+||+||++||||+++.. +..++.+ ..
T Consensus 6 ~~~~vi~--~~~--~vLl~~r~~-----~~w~~PgG~ve~g-E~~~~aa~RE~~EE~Gl~~~~--~~~~~~~------~~ 67 (134)
T 2pbt_A 6 SAGGVLF--KDG--EVLLIKTPS-----NVWSFPKGNIEPG-EKPEETAVREVWEETGVKGEI--LDYIGEI------HY 67 (134)
T ss_dssp EEEEEEE--ETT--EEEEEECTT-----SCEECCEEECCTT-CCHHHHHHHHHHHHHSEEEEE--EEEEEEE------EE
T ss_pred EEEEEEE--ECC--EEEEEEeCC-----CcEECCccccCCC-CCHHHHHHHHHHHHHCCccEE--eeeeeEE------EE
Confidence 3444443 444 699987754 4699999999998 999999999999999999853 3333321 12
Q ss_pred eecCCCc-cceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 226 FFPSAGG-CDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 226 ~~~spg~-~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
.++++|. ....+++|.+..... .. ...+|..++.|++++++.++..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~---------~~---~~~~e~~~~~W~~~~el~~~~~ 114 (134)
T 2pbt_A 68 WYTLKGERIFKTVKYYLMKYKEG---------EP---RPSWEVKDAKFFPIKEAKKLLK 114 (134)
T ss_dssp EEEETTEEEEEEEEEEEEEEEEE---------CC---CCCTTSSEEEEEEHHHHHHHCC
T ss_pred EeeCCCcEEEEEEEEEEEEecCC---------Cc---CCCcceeEEEEEcHHHHHhhhc
Confidence 4555553 345566677654321 11 1223888999999999999876
No 27
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.64 E-value=3.2e-15 Score=124.93 Aligned_cols=128 Identities=19% Similarity=0.230 Sum_probs=76.2
Q ss_pred CEEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccc-cCCCC
Q 021805 145 PAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFL-YPSTG 223 (307)
Q Consensus 145 ~aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~-~~~~~ 223 (307)
.+|+++++ ++++ +|||++|.+.+ ..|++|||++|+| |++.+||+||++||||+++. .+....... ...+.
T Consensus 15 ~~v~~~i~-~~~~--~vLl~~r~~~~---g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~--~~~~~~~~~~~~~~~ 85 (165)
T 1f3y_A 15 RNVGICLM-NNDK--KIFAASRLDIP---DAWQMPQGGIDEG-EDPRNAAIRELREETGVTSA--EVIAEVPYWLTYDFP 85 (165)
T ss_dssp CEEEEEEE-CTTS--CEEEEEETTEE---EEEECCEEECCTT-CCHHHHHHHHHHHHHCCCSE--EEEEECSSCCBCCCC
T ss_pred eeEEEEEE-CCCC--cEEEEecCCCC---CcEECCeeccCCC-CCHHHHHHHHHHHhhCCChh--hhhcccccceeeecC
Confidence 45556554 3334 59998876433 5899999999998 99999999999999999873 333221100 00000
Q ss_pred ce------eecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCCh
Q 021805 224 CK------FFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDA 285 (307)
Q Consensus 224 ~~------~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D~ 285 (307)
.. .+.........+++|++........+. .++ ...+++|..+++|++++++.+++.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~~---~~~~~~E~~~~~W~~~~el~~~~~~~ 149 (165)
T 1f3y_A 86 PKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEIN-LLG---DGSEKPEFGEWSWVTPEQLIDLTVEF 149 (165)
T ss_dssp HHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCC-CCC---CSSSCCSEEEEEEECHHHHHHHBCGG
T ss_pred ccccccccccccccccCceEEEEEEEecCCccccc-ccC---CCCCCChhheeEEecHHHHHHHhhhh
Confidence 00 000111122356677776532211110 000 01246789999999999999988653
No 28
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.63 E-value=1.1e-14 Score=121.31 Aligned_cols=99 Identities=21% Similarity=0.159 Sum_probs=69.9
Q ss_pred EEEEEEeeec-CCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEE
Q 021805 160 YAILTEQVRV-PTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEIS 238 (307)
Q Consensus 160 ~VLLvrQ~R~-p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~ 238 (307)
+|||+++.+. +.....|+||||.+|+| |++.+||+||++||||+.+....+.... .+..++ ....+.
T Consensus 21 ~vLL~~r~~~~~~~~g~w~~PgG~ve~g-E~~~~aa~REl~EE~Gl~~~~~~~~~~~----------~~~~~~-~~~~~~ 88 (153)
T 3grn_A 21 EFLLLRRSENSRTNAGKWDLPGGKVNPD-ESLKEGVAREVWEETGITMVPGDIAGQV----------NFELTE-KKVIAI 88 (153)
T ss_dssp CEEEEEECTTCSSSTTCEECSEEECCTT-CCHHHHHHHHHHHHHCCCCCCCSEEEEE----------EEECSS-CEEEEE
T ss_pred cEEEEEEcCCCCCCCCeEECceeecCCC-CCHHHHHHhhhhhhhCcEeecceEEEEE----------EEecCC-ceEEEE
Confidence 5988887764 33456899999999998 9999999999999999998644332221 122222 344555
Q ss_pred EEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhcc
Q 021805 239 LFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTT 282 (307)
Q Consensus 239 lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i 282 (307)
+|.+.... +. ....+|..++.|++++++.++.
T Consensus 89 ~~~~~~~~---------~~---~~~~~e~~~~~W~~~~el~~~~ 120 (153)
T 3grn_A 89 VFDGGYVV---------AD---VKLSYEHIEYSWVSLEKILGME 120 (153)
T ss_dssp EEEEEECC---------CC---CCCCTTEEEEEEECHHHHTTCS
T ss_pred EEEEEecC---------Cc---EecCCCcceEEEEEHHHhhhcc
Confidence 66654421 11 1234788899999999999886
No 29
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.62 E-value=3.2e-15 Score=125.16 Aligned_cols=102 Identities=17% Similarity=0.216 Sum_probs=72.3
Q ss_pred eEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEE
Q 021805 159 TYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEIS 238 (307)
Q Consensus 159 ~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~ 238 (307)
++|||+++.+.+.....|+||||.+|+| |++.+||+||++||||+.+....+..++.+ .+..++ ....++
T Consensus 41 ~~vLL~~r~~~~~~~g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~~~~~~~~~~~--------~~~~~~-~~~~~~ 110 (158)
T 3hhj_A 41 NRVLLTQRPEGKSLAGLWEFPGGKVEQG-ETPEASLIRELEEELGVHVQADNLFPLTFA--------SHGYET-FHLLMP 110 (158)
T ss_dssp SEEEEEECCCTTSCCCCCBCCEEECCTT-CCHHHHHHHHHHHHHCCBCCGGGCEEEEEE--------EEECSS-CEEEEE
T ss_pred CEEEEEEeCCCCCCCCEEECCceeecCC-CCHHHHHHHHHHHHhCcEeecceEEEEEEE--------eeccCC-cEEEEE
Confidence 3699988765554556899999999998 999999999999999999976555445421 122222 244455
Q ss_pred EEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 239 LFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 239 lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
+|.+.... +.....|..++.|++++++.++..
T Consensus 111 ~~~~~~~~-------------~~~~~~e~~~~~W~~~~el~~~~~ 142 (158)
T 3hhj_A 111 LYFCSHYK-------------GVAQGREGQNLKWIFINDLDKYPM 142 (158)
T ss_dssp EEEESCCB-------------SCCCCTTSCEEEEEEGGGGGGSCC
T ss_pred EEEEEECC-------------CccCCccccceEEEcHHHHhhCCC
Confidence 56553211 123567788999999999988765
No 30
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.62 E-value=1.6e-15 Score=136.13 Aligned_cols=130 Identities=19% Similarity=0.087 Sum_probs=84.3
Q ss_pred EEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCce
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCK 225 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~ 225 (307)
+|+++++..++++.+|||+++.+.|. ...|++|||++|+| |++.+||+||++||||+++. .+..++.+.+
T Consensus 15 ~v~~vi~~~~~~~~~vLLv~r~~~~~-~g~w~lPGG~ve~g-Es~~~Aa~REl~EEtGl~~~--~~~~l~~~~~------ 84 (226)
T 2fb1_A 15 GIDCIIFGFNEGEISLLLLKRNFEPA-MGEWSLMGGFVQKD-ESVDDAAKRVLAELTGLENV--YMEQVGAFGA------ 84 (226)
T ss_dssp EEEEEEEEEETTEEEEEEEECSSSSS-TTCEECEEEECCTT-SCHHHHHHHHHHHHHCCCSC--EEEEEEEECC------
T ss_pred EEEEEEEEEeCCCCEEEEEECcCCCC-CCCEECCeeccCCC-CCHHHHHHHHHHHHHCCCCC--ceEEEEEeCC------
Confidence 34444443235556899998877543 34799999999998 99999999999999999984 4455543100
Q ss_pred eecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCChhHHHHHHHHHHH
Q 021805 226 FFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAKVLTAIALYEMA 297 (307)
Q Consensus 226 ~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D~ktl~al~L~~~~ 297 (307)
.+..++. ......|++.... . .. ..+.+|..++.|++++++.++..|...+.+.++..+.
T Consensus 85 ~~r~~~~-~~v~~~y~a~~~~--~-------~~--~~~~~e~~~~~W~~~~el~~l~~dh~~il~~a~~rlr 144 (226)
T 2fb1_A 85 IDRDPGE-RVVSIAYYALINI--N-------EY--DRELVQKHNAYWVNINELPALIFDHPEMVDKAREMMK 144 (226)
T ss_dssp TTSSSSS-CEEEEEEEEECCT--T-------SS--CHHHHHHTTEEEEETTSCCCBSTTHHHHHHHHHHHHH
T ss_pred CCcCCCc-eEEEEEEEEEecC--c-------cc--ccCCccccceEEEEHHHhhhccCCHHHHHHHHHHHHH
Confidence 1112222 2222346554321 1 00 0133567789999999999998898877766655543
No 31
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.62 E-value=1.5e-15 Score=131.86 Aligned_cols=115 Identities=21% Similarity=0.182 Sum_probs=75.6
Q ss_pred EEEEEEEEecCCceEEEEEEeeec-CCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCc
Q 021805 146 AVAVLILLDSEGETYAILTEQVRV-PTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGC 224 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~-p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~ 224 (307)
+++++++ +++++.+|||++|.+. ......|++|||++|+| |++.+||+||++||||+++. .+..++.+
T Consensus 36 ~~~~v~i-~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~--~~~~l~~~------- 104 (194)
T 1nqz_A 36 AAVLVAL-TREADPRVLLTVRSSELPTHKGQIAFPGGSLDAG-ETPTQAALREAQEEVALDPA--AVTLLGEL------- 104 (194)
T ss_dssp EEEEEEE-ESSSSCBBCEEEEC------CCCEECSEEECCTT-CCHHHHHHHHHHHHHCCCGG--GCEEEEEC-------
T ss_pred EEEEEEE-ecCCCeEEEEEEecCCCCCCCCeEECCcccCCCC-CCHHHHHHHHHHHHHCCCcc--ceEEEEEc-------
Confidence 4444444 4455336888887643 22345799999999998 99999999999999999985 34445431
Q ss_pred eeecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhH-hhcc
Q 021805 225 KFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYREL-WRTT 282 (307)
Q Consensus 225 ~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel-~~~i 282 (307)
....+..+..+++|++......+ . ...+++|..++.|++++++ .+..
T Consensus 105 --~~~~~~~~~~~~~f~~~~~~~~~-~--------~~~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 105 --DDVFTPVGFHVTPVLGRIAPEAL-D--------TLRVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp --CCEEETTTEEEEEEEEEECGGGG-G--------GCCCCTTEEEEECCBHHHHHHSCC
T ss_pred --cCccCCCCeEEEEEEEEecCCcc-c--------cCCCccceeEEEEEEHHHhccCCC
Confidence 11122345677888776532110 0 1246789999999999999 6543
No 32
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.61 E-value=5.5e-15 Score=127.00 Aligned_cols=110 Identities=15% Similarity=0.137 Sum_probs=73.0
Q ss_pred EEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCcee
Q 021805 147 VAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKF 226 (307)
Q Consensus 147 VaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~ 226 (307)
+++++++.+++ +|||+++.+.+ +...|++|||++|+| |++.+||+||++||||+++. .+..++.+ .
T Consensus 26 ~~~~~vi~~~~--~vLL~~r~~~~-~~g~W~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~--~~~~l~~~--------~ 91 (176)
T 3q93_A 26 LYTLVLVLQPQ--RVLLGMKKRGF-GAGRWNGFGGKVQEG-ETIEDGARRELQEESGLTVD--ALHKVGQI--------V 91 (176)
T ss_dssp EEEEEEEECSS--EEEEEEECSST-TTTSEECEEEECCTT-SCHHHHHHHHHHHHHSCEES--CCEEEEEE--------E
T ss_pred EEEEEEEEeCC--EEEEEEEcCCC-CCCeEECceecCCCC-CCHHHHHHHHHHHHHCCcce--eeEEEEEE--------E
Confidence 33444444444 69998876544 455799999999998 99999999999999999985 34444431 2
Q ss_pred ecCCCc-cceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 227 FPSAGG-CDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 227 ~~spg~-~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
+..++. ....+++|.+.... + .....|..++.|++++++.++..
T Consensus 92 ~~~~~~~~~~~~~~f~~~~~~---------~----~~~~~e~~~~~W~~~~el~~~~~ 136 (176)
T 3q93_A 92 FEFVGEPELMDVHVFCTDSIQ---------G----TPVESDEMRPCWFQLDQIPFKDM 136 (176)
T ss_dssp EEETTCSCEEEEEEEEESCEE---------S----CCCCCSSEEEEEEETTCCCGGGB
T ss_pred EEcCCCCcEEEEEEEEEECCC---------C----CcCCCcceeeEEeeHHHcccccc
Confidence 222222 22344556553221 1 22455677889999999987654
No 33
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.61 E-value=5.2e-15 Score=120.57 Aligned_cols=103 Identities=16% Similarity=0.113 Sum_probs=71.3
Q ss_pred cCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccc
Q 021805 155 SEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCD 234 (307)
Q Consensus 155 ~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~ 234 (307)
+++ +|||+++.+.+.....|+||||.+|+| |++.+||+||++||||+.+.. +..++.+ .+..++ ..
T Consensus 18 ~~~--~vLl~~r~~~~~~~g~w~lPgG~ve~g-E~~~~aa~RE~~EE~Gl~~~~--~~~~~~~--------~~~~~~-~~ 83 (140)
T 2rrk_A 18 RDG--KILLAQRPAQSDQAGLWEFAGGKVEPD-ESQRQALVRELREELGIEATV--GEYVASH--------QREVSG-RI 83 (140)
T ss_dssp ETT--EEEEEECCSSCSCCCCEECCEEECCTT-SCHHHHHHHHHHHHSCEEEEC--CEEEEEE--------EEEETT-EE
T ss_pred cCC--EEEEEEcCCCCCCCCEEECCceecCCC-CCHHHHHHHHHHHHHCCeeec--ccEEEEE--------EEecCC-cE
Confidence 444 598888766555556899999999998 999999999999999999853 3334321 122222 23
Q ss_pred eEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCC
Q 021805 235 EEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPD 284 (307)
Q Consensus 235 e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D 284 (307)
..+++|.+.... + ....+|..++.|++++++.++...
T Consensus 84 ~~~~~~~~~~~~---------~----~~~~~e~~~~~W~~~~el~~~~~~ 120 (140)
T 2rrk_A 84 IHLHAWHVPDFH---------G----TLQAHEHQALVWCSPEEALQYPLA 120 (140)
T ss_dssp EEEEEEEESEEE---------E----CCCCSSCSCEEEECHHHHTTSCCC
T ss_pred EEEEEEEEEeeC---------C----CcCCCccceeEEeCHHHHhhCCCC
Confidence 455666654321 1 123456678999999999987663
No 34
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.61 E-value=6.4e-15 Score=125.87 Aligned_cols=120 Identities=23% Similarity=0.307 Sum_probs=79.4
Q ss_pred EEEEEEEEecCCceEEEEEEeeecCCC---CeEEEc-cceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCC
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVPTG---RVILEL-PAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPS 221 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p~g---~~~wEl-PaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~ 221 (307)
+++++++ +.++ +|||.+ |.+.+ .+.|+| |||++|+| |++.+||+||++||||+.+. .+..++.
T Consensus 39 ~~~v~i~-~~~~--~vLl~~--R~~~~~~~~g~w~l~pGG~ve~g-E~~~~aa~REl~EEtGl~~~--~~~~l~~----- 105 (180)
T 2fkb_A 39 ATYIVVH-DGMG--KILVQR--RTETKDFLPGMLDATAGGVVQAD-EQLLESARREAEEELGIAGV--PFAEHGQ----- 105 (180)
T ss_dssp EEEEEEE-CSSS--CEEEEE--ECSSCSSSTTCEESSBCCBCBTT-CCHHHHHHHHHHHHHCCBSC--CCEEEEE-----
T ss_pred EEEEEEE-CCCC--EEEEEE--CCCCCccCCCcEEeecCCCCCCC-CCHHHHHHHHHHHHHCCCcc--ceEEEEE-----
Confidence 4555543 3334 477754 33322 347999 99999998 99999999999999999874 3455543
Q ss_pred CCceeecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC--ChhHHHHHHHH
Q 021805 222 TGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP--DAKVLTAIALY 294 (307)
Q Consensus 222 ~~~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~--D~ktl~al~L~ 294 (307)
++..++..+..+++|++.. . +.. ..+++|..++.|++++++.+++. ......++..|
T Consensus 106 ----~~~~~~~~~~~~~~f~~~~--~--------~~~--~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~~ 164 (180)
T 2fkb_A 106 ----FYFEDKNCRVWGALFSCVS--H--------GPF--ALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALW 164 (180)
T ss_dssp ----EEEEETTEEEEEEEEEEEC--C--------CCC--CCCTTTEEEEEEECHHHHHTTGGGBCHHHHHHHHHH
T ss_pred ----EEecCCCceEEEEEEEEec--C--------CCc--CCChhHhheEEEecHHHHHHHHHHhCCcHHHHHHHH
Confidence 3333344556677777652 1 111 23678899999999999999853 44444444433
No 35
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.61 E-value=7.2e-15 Score=123.84 Aligned_cols=111 Identities=16% Similarity=0.081 Sum_probs=64.8
Q ss_pred EEEEEEeeec-CCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEE
Q 021805 160 YAILTEQVRV-PTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEIS 238 (307)
Q Consensus 160 ~VLLvrQ~R~-p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~ 238 (307)
+|||+++... +.....|++|||++|+| |++.+||+||++||||+++....+..+.- ........|+........+.
T Consensus 40 ~vLL~~r~~~~~~~~g~w~lPgG~ve~g-E~~~~aa~REl~EEtGl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 116 (165)
T 3oga_A 40 CYLLCKMADNRGVFPGQWALSGGGVEPG-ERIEEALRREIREELGEQLILSDITPWTF--RDDIRIKTYADGRQEEIYMI 116 (165)
T ss_dssp EEEEEEECC------CCEECCCEECCTT-CCHHHHHHHHHHHHHCSSCCEEEEEEEEE--EEEEEEEEC--CCEEEEEEE
T ss_pred EEEEEEecCCCCCCCCeEECCccccCCC-CCHHHHHHHHHHHHhCCCccccceeeeee--ecceeeEecCCCCceeEEEE
Confidence 5888866432 22345799999999998 99999999999999999986544433210 00000012332222222222
Q ss_pred EEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 239 LFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 239 lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
++++...... +. ....+|..++.|++++++.++..
T Consensus 117 ~~~~~~~~~~-------~~---~~~~~E~~~~~W~~~~el~~~~~ 151 (165)
T 3oga_A 117 YLIFDCVSAN-------RD---ICINDEFQDYAWVKPEELALYDL 151 (165)
T ss_dssp EEEEEEEESC-------CC---CCCCTTEEEEEEECGGGGGGSCB
T ss_pred EEEEEeeccC-------CC---ccCCchheeeEEccHHHHhhCCC
Confidence 2222222111 11 12347889999999999998765
No 36
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.61 E-value=4.5e-15 Score=124.52 Aligned_cols=118 Identities=15% Similarity=0.133 Sum_probs=72.2
Q ss_pred EEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeecccccc-CCCCc
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLY-PSTGC 224 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~-~~~~~ 224 (307)
+|+++++ +++ +|||+++.+ ...|++|||++|+| |++.+||+||++||||+++....+..+..-.. .....
T Consensus 8 ~v~~vi~--~~~--~vLL~~r~~----~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 78 (159)
T 3f6a_A 8 TVSVFIV--CKD--KVLLHLHKK----AKKMLPLGGHIEVN-ELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDLSGE 78 (159)
T ss_dssp EEEEEEE--ETT--EEEEEECSS----SCCEECEEEECCTT-CCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHTTC
T ss_pred EEEEEEE--ECC--EEEEEEcCC----CCeEECCccCccCC-CCHHHHHHHHHHHHhCCCceeccccccccccccccccc
Confidence 4444443 344 699988764 24699999999998 99999999999999999986433322110000 00000
Q ss_pred eeecCCC---------ccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 225 KFFPSAG---------GCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 225 ~~~~spg---------~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
..++.|. .......+|++.... +.. ..+++|..+++|++++++.++..
T Consensus 79 ~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~---------~~~--~~~~~E~~~~~W~~~~el~~~~~ 135 (159)
T 3f6a_A 79 KLLINPIHTILGDVSPNHSHIDFVYYATTTS---------FET--SPEIGESKILKWYSKEDLKNAHN 135 (159)
T ss_dssp EEECCCSEEEEECSSSSSCEEEEEEEEECSC---------SCC--CCCTTSCCCEEEECSSSSTTCSS
T ss_pred ccccCccccccccCCCCceEEEEEEEEEeCC---------CCc--CCCCCcccceEEeeHHHHhhCcC
Confidence 1222222 112333556665421 111 22567888999999999998874
No 37
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.60 E-value=1.2e-15 Score=135.55 Aligned_cols=143 Identities=13% Similarity=0.108 Sum_probs=88.7
Q ss_pred ccEEEEEEEEEEcCCCcEEeEEEEEeCCEEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCC-CHHHHHHH
Q 021805 118 IGFLKFKADIFCKETGQKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKG-DFVGTAVR 196 (307)
Q Consensus 118 ~~~i~~~~d~~~~~~G~~~~~~v~~r~~aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~E-t~~~AA~R 196 (307)
+.|+.+ .+.+..++|...-+.++.+++++.++++++++ +++||+++ . ...|+||||++|+| | ++.+||+|
T Consensus 18 ~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~vv~~i~~~~--~~vLl~~r--~---~g~w~~PGG~ve~g-E~t~~~aa~R 88 (212)
T 1u20_A 18 PRNISR-EESLQLEGYKHACHALLHAPSQAKLFDRVPIR--RVLLMMMR--F---DGRLGFPGGFVDTR-DISLEEGLKR 88 (212)
T ss_dssp SEECCH-HHHHSCSSCEEEEEEEEEEECCCEETTTEECC--EEEEEEEE--T---TSCEECSEEEECTT-TSCHHHHHHH
T ss_pred cccCCH-HHHhhcCCCcccceEEEeCCCceEEEEEEecC--CEEEEEEe--C---CCeEECCCcccCCC-CCCHHHHHHH
Confidence 456555 35555678877655555555544444443322 36777654 2 34799999999998 9 99999999
Q ss_pred HHHHHhCCccccccee---eccccccCCCCceeecCCCccceEEEEEEEEEechhHHHHHhccC-CCccCCCCceEEEEE
Q 021805 197 EVEEETGIQLKLEDMI---DLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGK-ETGLRDHGELIKVRV 272 (307)
Q Consensus 197 El~EETGl~i~~~~L~---~L~~l~~~~~~~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~-~~g~~~~~E~i~v~w 272 (307)
|++||||+.+....+. .++. ..+..+ ....+++|++.... ..+....+. .....+++|..++.|
T Consensus 89 El~EEtGl~~~~~~l~~~~~~~~--------~~~~~~--~~~~~~~f~~~~~~--~~~~~~e~~~~~~~~~~~Ev~~~~w 156 (212)
T 1u20_A 89 ELEEELGPALATVEVTEDDYRSS--------QVREHP--QKCVTHFYIKELKL--EEIERIEAEAVNAKDHGLEVMGLIR 156 (212)
T ss_dssp HHHHHHCGGGGGCCCCGGGEEEE--------EEECTT--SCEEEEEEEEECCH--HHHHHHHHHHTTSTTBTTTEEEEEE
T ss_pred HHHHHHCCCccccceeeeeEEEe--------ccccCC--CcEEEEEEEEEecC--CCcccccccccccccCCcceEEEEE
Confidence 9999999998643321 2322 122222 46677888876432 222111000 001124678899999
Q ss_pred EchhhHhhc
Q 021805 273 VPYRELWRT 281 (307)
Q Consensus 273 vpleel~~~ 281 (307)
+|++++.+.
T Consensus 157 vpl~el~~~ 165 (212)
T 1u20_A 157 VPLYTLRDR 165 (212)
T ss_dssp CCCSBCTTS
T ss_pred EEHHHhhhh
Confidence 999999764
No 38
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.60 E-value=8.7e-15 Score=122.04 Aligned_cols=105 Identities=16% Similarity=0.157 Sum_probs=70.8
Q ss_pred EEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCC--C---ccc
Q 021805 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSA--G---GCD 234 (307)
Q Consensus 160 ~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~sp--g---~~~ 234 (307)
+|||+++.+.+ ....|++|||++|+| |++.+||+||++||||+.+....+..++.+ ...|+.. | ...
T Consensus 31 ~vLl~~r~~~~-~~g~w~~PgG~ve~g-E~~~~aa~REl~EEtGl~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 102 (160)
T 1rya_A 31 EFLLGKRTNRP-AQGYWFVPGGRVQKD-ETLEAAFERLTMAELGLRLPITAGQFYGVW------QHFYDDNFSGTDFTTH 102 (160)
T ss_dssp CEEEEEECSSS-STTSEECCEEECCTT-CCHHHHHHHHHHHHHSSCCCGGGSEEEEEE------EEEESSBTTBSSSCEE
T ss_pred EEEEEeccCCC-CCCEEECCccccCCC-CCHHHHHHHHHHHHHCCCCCcccceEEEEE------eEEEcccccCCCcCcE
Confidence 59998887654 345799999999998 999999999999999999743344444331 1133322 1 113
Q ss_pred eEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 235 EEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 235 e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
..+++|.+.... .. . ..+++|..++.|++++++.++..
T Consensus 103 ~~~~~f~~~~~~--~~-------~--~~~~~e~~~~~W~~~~el~~~~~ 140 (160)
T 1rya_A 103 YVVLGFRFRVSE--EE-------L--LLPDEQHDDYRWLTSDALLASDN 140 (160)
T ss_dssp EEEEEEEEECCG--GG-------C--CCCSSSEEEEEEECHHHHHHCTT
T ss_pred EEEEEEEEEcCc--cc-------c--ccCCCccceEEEecHHHHhhccc
Confidence 455566665321 11 1 13567889999999999988643
No 39
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.60 E-value=1.2e-14 Score=116.52 Aligned_cols=108 Identities=17% Similarity=0.167 Sum_probs=73.8
Q ss_pred EEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCce
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCK 225 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~ 225 (307)
+|+++++ ++++ ++||+++.+ ..|++|||++|+| |++.+||+||++||||+.+.. +..++.+
T Consensus 4 ~~~~vi~-~~~~--~vLl~~r~~-----g~w~~PgG~ve~g-E~~~~aa~RE~~EE~Gl~~~~--~~~~~~~-------- 64 (126)
T 1vcd_A 4 GAGGVVF-NAKR--EVLLLRDRM-----GFWVFPKGHPEPG-ESLEEAAVREVWEETGVRAEV--LLPLYPT-------- 64 (126)
T ss_dssp EEEEEEE-CTTS--CEEEEECTT-----SCEECCEECCCTT-CCHHHHHHHHHHHHHCCEEEE--EEEEEEE--------
T ss_pred EEEEEEE-cCCC--EEEEEEECC-----CCccCCcCcCCCC-CCHHHHHHHHHHHhhCcEeee--ccEEeEE--------
Confidence 3444443 2334 588887643 3599999999998 999999999999999999853 3334321
Q ss_pred eecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCCh
Q 021805 226 FFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDA 285 (307)
Q Consensus 226 ~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D~ 285 (307)
.|..++. ...+++|++.... +. ...++|..++.|++++++.+++...
T Consensus 65 ~~~~~~~-~~~~~~~~~~~~~---------~~---~~~~~e~~~~~w~~~~el~~~~~~~ 111 (126)
T 1vcd_A 65 RYVNPKG-VEREVHWFLMRGE---------GA---PRLEEGMTGAGWFSPEEARALLAFP 111 (126)
T ss_dssp EEECTTS-CEEEEEEEEEEEE---------SC---CCCCTTCCEEEEECHHHHHHHBCSH
T ss_pred EEecCCc-eEEEEEEEEEEcC---------CC---CCCCcceeeeEEcCHHHHHHhhcCh
Confidence 2343433 4556677665421 11 1245788899999999999887643
No 40
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.60 E-value=3.5e-15 Score=122.55 Aligned_cols=124 Identities=14% Similarity=0.053 Sum_probs=75.9
Q ss_pred CCEEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCC--
Q 021805 144 GPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPS-- 221 (307)
Q Consensus 144 ~~aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~-- 221 (307)
+-+|+++++. .+ .+++||+++.+. ...|++|||++|+| |++.+||+||++||||+.+....+..++......
T Consensus 9 ~~~v~~~i~~-~~-~~~vLl~~r~~~---~g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 82 (150)
T 2o1c_A 9 PVSILVVIYA-QD-TKRVLMLQRRDD---PDFWQSVTGSVEEG-ETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFE 82 (150)
T ss_dssp SEEEEEEEEE-TT-TCEEEEEECSSS---TTCEESEEEECCTT-CCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEE
T ss_pred ceEEEEEEEe-CC-CCEEEEEEecCC---CCceECCccccCCC-CCHHHHHHHHHHHHhCCCccccceeEEeeeceeeee
Confidence 3355555542 22 236888876543 24799999999998 9999999999999999998643332222100000
Q ss_pred -CCceeecCC-CccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCCh
Q 021805 222 -TGCKFFPSA-GGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDA 285 (307)
Q Consensus 222 -~~~~~~~sp-g~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D~ 285 (307)
.....+..+ +.....+++|.+..... . ....+|..++.|++++++.++....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~---------~---~~~~~E~~~~~W~~~~el~~~~~~~ 136 (150)
T 2o1c_A 83 IFSHLRHRYAPGVTRNTESWFCLALPHE---------R---QIVFTEHLAYKWLDAPAAAALTKSW 136 (150)
T ss_dssp CCGGGGGGBCTTCCEEEEEEEEEEESSC---------C---CCCCSSSSCEEEEEHHHHHHHCSCH
T ss_pred eecccccccCCCCcceEEEEEEEEcCCC---------C---CcChhHhhccEeecHHHHHhhhcCH
Confidence 000001122 33456667777654211 1 1133678899999999999987643
No 41
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.60 E-value=6.7e-15 Score=124.75 Aligned_cols=120 Identities=13% Similarity=0.176 Sum_probs=79.9
Q ss_pred EEEEEEEEecCCceEEEEEEeeecC-CCCeEEE-ccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCC
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVP-TGRVILE-LPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTG 223 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p-~g~~~wE-lPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~ 223 (307)
+|+++++ +.++ ++||+++...+ .....|+ +|||++|+| |++.+||+||++||||+.+....+..++.+
T Consensus 36 ~v~v~i~-~~~~--~vLl~~r~~~~~~~~g~w~~~PgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~l~~~~~~------ 105 (171)
T 1q27_A 36 VVNAFLR-NSQG--QLWIPRRSPSKSLFPNALDVSVGGAVQSG-ETYEEAFRREAREELNVEIDALSWRPLASF------ 105 (171)
T ss_dssp EEEEEEE-ETTT--EEEECCSCCSSSCCCCSCCCSEEEECSSS-SCHHHHHHHHHHHHHSCTTSSSCEEEEEEE------
T ss_pred EEEEEEE-CCCC--eEEEEEecCCCCCCCCccccccCccccCC-CCHHHHHHHHHHHHHCCcccccceEEEEEE------
Confidence 3455543 3344 68887643222 1245798 999999998 999999999999999999976556666542
Q ss_pred cee-ecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC-----ChhHHHHH
Q 021805 224 CKF-FPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP-----DAKVLTAI 291 (307)
Q Consensus 224 ~~~-~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~-----D~ktl~al 291 (307)
. |..++ ...+++|.+.. . +.. ..+++|..+++|++++++.+++. +.+++.++
T Consensus 106 --~~~~~~~--~~~~~~f~~~~--~--------~~~--~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~l 163 (171)
T 1q27_A 106 --SPFQTTL--SSFMCVYELRS--D--------ATP--IFNPNDISGGEWLTPEHLLARIAAGEAAKGDLAELV 163 (171)
T ss_dssp --CSSSSCC--SSEEEEEEEEC--C--------CCC--CSCTTTCSCCEEECHHHHHHHHHHHSSCCHHHHHHH
T ss_pred --eccCCCC--ccEEEEEEEEE--C--------Ccc--ccCchhhheEEEecHHHHHHHHhcCCCCchhHHHHH
Confidence 2 33333 23667777654 1 111 13567888899999999987643 66666544
No 42
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.60 E-value=1.8e-15 Score=124.79 Aligned_cols=112 Identities=21% Similarity=0.325 Sum_probs=73.3
Q ss_pred CEEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCc
Q 021805 145 PAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGC 224 (307)
Q Consensus 145 ~aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~ 224 (307)
.+++++++ +++.++|||+++.+ ...|++|||++|+| |++.+||+||++||||+++. .+..+..
T Consensus 5 ~~~~~~i~--~~~~~~vLl~~r~~----~g~w~~PgG~ve~g-Es~~~aa~RE~~EEtGl~~~--~~~~~~~-------- 67 (146)
T 2jvb_A 5 PVRGAAIF--NENLSKILLVQGTE----SDSWSFPRGKISKD-ENDIDCCIREVKEEIGFDLT--DYIDDNQ-------- 67 (146)
T ss_dssp CCEEEEEB--CTTSSEEEEECCSS----SSCCBCCEECCCSS-SCHHHHHHHHHHHHTSCCCS--SSSCSSC--------
T ss_pred EEEEEEEE--eCCCCEEEEEEEcC----CCcEECCcccCCCC-CCHHHHHHHHHHHHHCCCch--Hhccccc--------
Confidence 34555544 33224798887543 24799999999998 99999999999999999985 3333332
Q ss_pred eeecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 225 KFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 225 ~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
++.. +..+...++|++....... . ....+++|..++.|++++++.+++.
T Consensus 68 -~~~~-~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~E~~~~~W~~~~el~~~~~ 116 (146)
T 2jvb_A 68 -FIER-NIQGKNYKIFLISGVSEVF-------N-FKPQVRNEIDKIEWFDFKKISKTMY 116 (146)
T ss_dssp -EEEE-EETTEEEEEEEECCCCSSS-------C-CCCCCSSSCCCEEEEEHHHHHTGGG
T ss_pred -cccc-ccCCceEEEEEEEeccccc-------c-CCcCCcchhheeEEeEHHHHHhhhc
Confidence 2222 2334456666654322110 0 1112467889999999999999876
No 43
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.60 E-value=2.1e-14 Score=132.25 Aligned_cols=119 Identities=17% Similarity=0.151 Sum_probs=84.6
Q ss_pred ceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCcc---c
Q 021805 158 ETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGC---D 234 (307)
Q Consensus 158 ~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~---~ 234 (307)
+.+|||+++.+.|.. ..|++|||++|+| |++.+||+||++||||+++....+..++. |..++.. .
T Consensus 55 ~~~VLLv~R~~~p~~-g~W~lPGG~ve~g-Es~~~AA~REl~EEtGl~v~~~~l~~l~~----------~~~~~r~~~~~ 122 (273)
T 2fml_A 55 QLKVLLIQRKGHPFR-NSWALPGGFVNRN-ESTEDSVLRETKEETGVVISQENIEQLHS----------FSRPDRDPRGW 122 (273)
T ss_dssp EEEEEEEEECSSSST-TCEECCEEECCTT-SCHHHHHHHHHHHHHCCCCCGGGEEEEEE----------ECCTTSSTTSS
T ss_pred CcEEEEEEccCCCCC-CcEECCccCCCCC-cCHHHHHHHHHHHHHCCCCCcCcEEEEEE----------EcCCCCCCCce
Confidence 568999998776543 4799999999998 99999999999999999876666776653 3333321 2
Q ss_pred eEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHh-------------------------hccCChhHHH
Q 021805 235 EEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELW-------------------------RTTPDAKVLT 289 (307)
Q Consensus 235 e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~-------------------------~~i~D~ktl~ 289 (307)
...++|++.... +. ....+|..++.|++++++. .+.+|+..|.
T Consensus 123 ~~~~~y~a~~~~---------~~---~~~~~E~~~~~W~~~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~~LafdH~~Il 190 (273)
T 2fml_A 123 VVTVSYLAFIGE---------EP---LIAGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASLGKDTLAFDHSEII 190 (273)
T ss_dssp EEEEEEEEECCC---------CC---CCCCTTEEEEEEEEEEEETTEEEEEETTEEEEEETTTCCBCSSSCCSTTHHHHH
T ss_pred EEEEEEEEEeCC---------CC---CCCCcceeeEEEEEhhHhhhhhccccchhhhccccccccccCCCcccccHHHHH
Confidence 344556654321 11 2356788999999999753 3445888888
Q ss_pred HHHHHHHHHhc
Q 021805 290 AIALYEMASKE 300 (307)
Q Consensus 290 al~L~~~~~~~ 300 (307)
+-++.++..+.
T Consensus 191 ~~al~rlr~kl 201 (273)
T 2fml_A 191 IKAFNRVVDKM 201 (273)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 87776665543
No 44
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.60 E-value=3.4e-15 Score=125.96 Aligned_cols=106 Identities=18% Similarity=0.152 Sum_probs=68.4
Q ss_pred EecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCC-C
Q 021805 153 LDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSA-G 231 (307)
Q Consensus 153 l~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~sp-g 231 (307)
+.+++.++|||+++.+.+.. ..|++|||++|+| |++.+||+||++||||+.+...+ .++.+ .+..+ .
T Consensus 17 i~~~~~~~vLL~~r~~~~~~-g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~--~~~~~--------~~~~~~~ 84 (161)
T 3exq_A 17 VTDPETQRVLVEDKVNVPWK-AGHSFPGGHVEVG-EPCATAAIREVFEETGLRLSGVT--FCGTC--------EWFDDDR 84 (161)
T ss_dssp EBCTTTCCEEEECCCCCTTT-CSBBCCCCBCCTT-SCHHHHHHHHHHHHHCCEESCCE--EEEEE--------EEECSSC
T ss_pred EEeCCCCEEEEEEccCCCCC-CCEEccceecCCC-CCHHHHHHHHHHHhhCcEecCCc--EEEEE--------ecccCCC
Confidence 33444246999887644333 3589999999998 99999999999999999986433 33321 22221 2
Q ss_pred ccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 232 GCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 232 ~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
.....+.+|.+.... + .....|..++.|++++++.++..
T Consensus 85 ~~~~~~~~~~~~~~~---------~----~~~~~e~~~~~W~~~~el~~~~~ 123 (161)
T 3exq_A 85 QHRKLGLLYRASNFT---------G----TLKASAEGQLSWLPITALTRENS 123 (161)
T ss_dssp SSEEEEEEEEECCEE---------S----CCCGGGTTTEEEECGGGCCTTTB
T ss_pred CeEEEEEEEEEeccC---------C----ccCCCccceEEEeeHHHhhhCcc
Confidence 233344455443221 1 12345566799999999988754
No 45
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.59 E-value=5.3e-15 Score=130.31 Aligned_cols=102 Identities=16% Similarity=0.068 Sum_probs=67.5
Q ss_pred EEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceE-EE
Q 021805 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEE-IS 238 (307)
Q Consensus 160 ~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~-i~ 238 (307)
+|||+++.. ...|++|||++|+| |++.+||+||++||||+++....+..... ...+..++..... ..
T Consensus 80 ~vLLv~r~~----~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~v~~~~~l~~~~-------~~~~~~~~~~~~~~~~ 147 (205)
T 3q1p_A 80 KLLFVKEKS----DGKWALPGGWADVG-YTPTEVAAKEVFEETGYEVDHFKLLAIFD-------KEKHQPSPSATHVYKI 147 (205)
T ss_dssp EEEEEEC-------CCEECSEEECCTT-CCHHHHHHHHHHHHHSEEEEEEEEEEEEE-------HHHHSCCCCSSCEEEE
T ss_pred EEEEEEEcC----CCcEECCcCccCCC-CCHHHHHHHHHHHHHCCccccceEEEEEe-------ccccCCCCCCceEEEE
Confidence 699988653 24799999999998 99999999999999999986433333221 0112223443333 44
Q ss_pred EEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCCh
Q 021805 239 LFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDA 285 (307)
Q Consensus 239 lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D~ 285 (307)
+|.+... . +. .....|..++.|++++++.++..+.
T Consensus 148 ~~~~~~~-~--------~~---~~~~~E~~~~~w~~~~el~~l~~~~ 182 (205)
T 3q1p_A 148 FIGCEII-G--------GE---KKTSIETEEVEFFGENELPNLSIAR 182 (205)
T ss_dssp EEEEEEE-E--------EC---CCCCTTSCCEEEECTTSCCCBCTTT
T ss_pred EEEEEec-C--------Cc---cCCCCcceEEEEEeHHHhhhcCCCc
Confidence 4555432 1 11 1234788899999999999887633
No 46
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.59 E-value=6e-15 Score=125.06 Aligned_cols=105 Identities=22% Similarity=0.313 Sum_probs=67.0
Q ss_pred cCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccc
Q 021805 155 SEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCD 234 (307)
Q Consensus 155 ~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~ 234 (307)
+++ +|||++|.+. ...|++|||++|+| |++.+||+||++||||+++....+.. .+..++...
T Consensus 32 ~~~--~vLL~~r~~~---~~~w~~PgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~~~~------------~~~~~~~~~ 93 (171)
T 3id9_A 32 EDE--KVLLVKQKVA---NRDWSLPGGRVENG-ETLEEAMIREMREETGLEVKIKKLLY------------VCDKPDASP 93 (171)
T ss_dssp ETT--EEEEEECSST---TCCEECCEEECCTT-CCHHHHHHHHHHHHHCCCEEEEEEEE------------EEEETTSSS
T ss_pred ECC--EEEEEEEECC---CCeEECCCccCCCC-CCHHHHHHHHHHHHHCCccccceEEE------------EEcccCCCC
Confidence 444 6999988763 45799999999998 99999999999999999985333222 233333333
Q ss_pred eEE-EEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 235 EEI-SLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 235 e~i-~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
... .+|.+... ..+ +. . .....+++|..++.|++++++.++..
T Consensus 94 ~~~~~~~~~~~~-~~~-~~---~-~~~~~~~~E~~~~~w~~~~el~~~~~ 137 (171)
T 3id9_A 94 SLLHITFLLERI-EGE-IT---L-PSNEFDHNPIHDVQMVPINELSYYGF 137 (171)
T ss_dssp CEEEEEEEEEEC-------------------CCCCCEEEEETGGGGGGTC
T ss_pred cEEEEEEEEEEc-CCc-cc---C-CccCCCcCeeeeEEEEeHHHHhhCCC
Confidence 333 34544432 211 10 0 01123567888999999999998765
No 47
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.59 E-value=1.1e-14 Score=120.25 Aligned_cols=100 Identities=13% Similarity=0.086 Sum_probs=70.2
Q ss_pred EEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEEE
Q 021805 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISL 239 (307)
Q Consensus 160 ~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~l 239 (307)
+|||+++.+.+...+.|+||||++|+| |++.+||+||++||||+.+....+.... .+..++ ....+++
T Consensus 34 ~vLl~~r~~~~~~~g~w~~PgG~ve~g-E~~~~aa~RE~~EE~Gl~~~~~~~~~~~----------~~~~~~-~~~~~~~ 101 (153)
T 3ees_A 34 KILVGQRPENNSLAGQWEFPGGKIENG-ETPEEALARELNEELGIEAEVGELKLAC----------THSYGD-VGILILF 101 (153)
T ss_dssp EEEEEECCTTSTTTTCEECSEEECCTT-CCHHHHHHHHHHHHHSCEEECCCEEEEE----------EEEETT-EEEEEEE
T ss_pred EEEEEEeCCCCCCCCeEECCceeeCCC-CCHHHHHHHHHHHHHCCccccCceEEEE----------EEecCC-CeEEEEE
Confidence 699988776545556899999999998 9999999999999999998643332221 122222 2334555
Q ss_pred EEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCC
Q 021805 240 FLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPD 284 (307)
Q Consensus 240 f~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D 284 (307)
|.+.... + ..+.+|..++.|++++++.++...
T Consensus 102 ~~~~~~~---------~----~~~~~e~~~~~W~~~~el~~~~~~ 133 (153)
T 3ees_A 102 YEILYWK---------G----EPRAKHHMMLEWIHPEELKHRNIP 133 (153)
T ss_dssp EEECEEE---------S----CCCCSSSSEEEEECGGGGGGSCCC
T ss_pred EEEEECC---------C----CcCCCccceEEEecHHHhhhCCCC
Confidence 6554321 1 235667789999999999987653
No 48
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.59 E-value=2.9e-15 Score=125.26 Aligned_cols=104 Identities=16% Similarity=0.116 Sum_probs=61.3
Q ss_pred EEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEEE
Q 021805 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISL 239 (307)
Q Consensus 160 ~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~l 239 (307)
+|||+++. ...|++|||++|+| |++.+||+||++||||+++....+..... . ......|+........+.+
T Consensus 34 ~vLL~~r~-----~~~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~ 104 (153)
T 3eds_A 34 EILFQYPG-----GEYWSLPAGAIELG-ETPEEAVVREVWEETGLKVQVKKQKGVFG--G-KEYRYTYSNGDEVEYIVVV 104 (153)
T ss_dssp CEEEECC--------CBBCSEEECCTT-SCHHHHHHHHHHHHHCEEEEEEEEEEEEC--S-GGGEEECTTSCEEEEEEEE
T ss_pred eEEEEEcC-----CCcEECCccccCCC-CCHHHHHHHHHHHHHCccceeeeEEEEec--c-cceeeecCCCCeEEEEEEE
Confidence 58885543 34799999999998 99999999999999999986433322210 0 0000122322222335566
Q ss_pred EEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 240 FLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 240 f~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
|.+..... .. ..+++|..+++|++++++.++..
T Consensus 105 f~~~~~~~---------~~--~~~~~E~~~~~W~~~~el~~l~~ 137 (153)
T 3eds_A 105 FECEVTSG---------EL--RSIDGESLKLQYFSLSEKPPLAL 137 (153)
T ss_dssp EEEEEEEE---------CC--C-------CEEEECGGGCCCBSS
T ss_pred EEEEecCC---------cc--ccCCCcEEEEEEECHHHCchhcc
Confidence 76654321 11 23567888999999999998865
No 49
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.58 E-value=8.4e-15 Score=129.14 Aligned_cols=102 Identities=18% Similarity=0.234 Sum_probs=66.4
Q ss_pred EEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceE-EE
Q 021805 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEE-IS 238 (307)
Q Consensus 160 ~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~-i~ 238 (307)
+|||+++. ...|+||||++|+| |++.+||+||++||||+++....+..... ...+..++..... ..
T Consensus 82 ~vLLvrr~-----~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~ 148 (206)
T 3o8s_A 82 KILLVQEN-----DGLWSLPGGWCDVD-QSVKDNVVKEVKEEAGLDVEAQRVVAILD-------KHKNNPAKSAHRVTKV 148 (206)
T ss_dssp EEEEEECT-----TSCEECSEEECCTT-SCHHHHHHHHHHHHHCEEEEEEEEEEEEE-------HHHHCC-----CEEEE
T ss_pred EEEEEEec-----CCeEECCeeccCCC-CCHHHHHHHHHHHHHCCcceeeeEEEEEe-------ccccCCCCCCceEEEE
Confidence 69998765 34799999999998 99999999999999999985433322211 0112334333333 34
Q ss_pred EEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCChh
Q 021805 239 LFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAK 286 (307)
Q Consensus 239 lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D~k 286 (307)
+|.+... . +. .....|..++.|++++++.++..+..
T Consensus 149 ~~~~~~~-~--------~~---~~~~~E~~~~~w~~~~el~~l~~~~~ 184 (206)
T 3o8s_A 149 FILCRLL-G--------GE---FQPNSETVASGFFSLDDLPPLYLGKN 184 (206)
T ss_dssp EEEEEEE-E--------EC---CCCCSSCSEEEEECTTSCCCBCTTTC
T ss_pred EEEEEec-C--------Ce---ecCCCCceEEEEEeHHHhhhccCCCc
Confidence 4555432 1 11 12337888999999999998876443
No 50
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.58 E-value=1.7e-14 Score=130.60 Aligned_cols=131 Identities=15% Similarity=0.147 Sum_probs=84.9
Q ss_pred EEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCC--CCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCC
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDD--DKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTG 223 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~--g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~ 223 (307)
+|+++++..++++.+|||+++.+.|. ...|++|||++|+ | |++.+||+||++||||+++. .+..++.+.
T Consensus 24 ~v~~vi~~~~~~~~~vLLv~R~~~~~-~g~W~lPGG~ve~~~g-Es~~~AA~REl~EEtGl~~~--~~~~l~~~~----- 94 (240)
T 3gz5_A 24 TVDAVLFTYHDQQLKVLLVQRSNHPF-LGLWGLPGGFIDETCD-ESLEQTVLRKLAEKTAVVPP--YIEQLCTVG----- 94 (240)
T ss_dssp EEEEEEEEEETTEEEEEEEECCSSSS-TTCEECSEEECCTTTC-SBHHHHHHHHHHHHHSSCCS--EEEEEEEEE-----
T ss_pred EEEEEEEEEeCCCcEEEEEECcCCCC-CCCEECCccccCCCCC-cCHHHHHHHHHHHHHCCCCC--ceeeEEEeC-----
Confidence 34444443345667899998876553 3469999999999 8 99999999999999999984 455554321
Q ss_pred ceeecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHh--hccCChhHHHHHHHHHHHH
Q 021805 224 CKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELW--RTTPDAKVLTAIALYEMAS 298 (307)
Q Consensus 224 ~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~--~~i~D~ktl~al~L~~~~~ 298 (307)
.....++. ......|++... ..... ...+|..++.|++++++. .+..|.+.+.+.++..+..
T Consensus 95 -~~~r~~~~-~~~~~~y~a~~~--~~~~~---------~~~~e~~~~~W~~~~el~~~~l~~dh~~il~~a~~rlr~ 158 (240)
T 3gz5_A 95 -NNSRDARG-WSVTVCYTALMS--YQACQ---------IQIASVSDVKWWPLADVLQMPLAFDHLQLIEQARERLTQ 158 (240)
T ss_dssp -ESSSSTTS-CEEEEEEEEECC--HHHHH---------HHHTTCTTEEEEEHHHHTTSCCSTTHHHHHHHHHHHHHH
T ss_pred -CCccCCCc-eEEEEEEEEEec--ccccC---------CCCCcccceEEecHHHcccCCcchhHHHHHHHHHHHHHH
Confidence 11223333 233344555432 22111 023456678999999997 4667888887776655444
No 51
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.58 E-value=5.3e-15 Score=121.61 Aligned_cols=116 Identities=15% Similarity=0.067 Sum_probs=73.7
Q ss_pred CEEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCc
Q 021805 145 PAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGC 224 (307)
Q Consensus 145 ~aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~ 224 (307)
.+|+++++ ++++++|||+++ .+ ..|++|||.+|+| |++.+||+||++||||+.+.. +..++.+. .
T Consensus 19 ~~~~~vi~--~~~~~~vLl~~r--~~---g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~~--~~~~~~~~-----~ 83 (148)
T 2azw_A 19 YAAYIIVS--KPENNTMVLVQA--PN---GAYFLPGGEIEGT-ETKEEAIHREVLEELGISVEI--GCYLGEAD-----E 83 (148)
T ss_dssp CEEEEECE--EGGGTEEEEEEC--TT---SCEECSEEECCTT-CCHHHHHHHHHHHHHSEEEEE--EEEEEEEE-----E
T ss_pred eEEEEEEE--CCCCCeEEEEEc--CC---CCEeCCCcccCCC-CCHHHHHHHHHHHHhCCeeEe--eeEEEEEE-----E
Confidence 34545544 232246888764 22 4699999999998 999999999999999999853 33333210 0
Q ss_pred eeecCCCc--cceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCChhH
Q 021805 225 KFFPSAGG--CDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAKV 287 (307)
Q Consensus 225 ~~~~spg~--~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D~kt 287 (307)
..++..+. .+..+++|.+..... . ....+|..++.|++++++.+++..+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~---~~~~~e~~~~~W~~~~el~~~~~~~~~ 136 (148)
T 2azw_A 84 YFYSNHRQTAYYNPGYFYVANTWRQ---------L---SEPLERTNTLHWVAPEEAVRLLKRGSH 136 (148)
T ss_dssp EEEETTTTEEEEEEEEEEEEEEEEE---------C---SSCC-CCSEEEEECHHHHHHHBSCHHH
T ss_pred EEcCCCCCcceEEEEEEEEEEcCcC---------C---cCCCCceeeEEEeeHHHHHhhhcchhH
Confidence 13443433 234466676654321 1 113456679999999999998875443
No 52
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.56 E-value=4.2e-15 Score=130.30 Aligned_cols=117 Identities=21% Similarity=0.114 Sum_probs=75.2
Q ss_pred EEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCcee
Q 021805 147 VAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKF 226 (307)
Q Consensus 147 VaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~ 226 (307)
|+++++. .+++++|||++|++.| ..|++|||++|+| |++++||+||++||||+++.. +..++. +
T Consensus 43 ~~~vi~~-~~~~~~vLLv~r~~~~---g~W~lPgG~ve~g-Et~~eaa~REl~EEtGl~~~~--~~~l~~---------~ 106 (194)
T 2fvv_A 43 AACLCFR-SESEEEVLLVSSSRHP---DRWIVPGGGMEPE-EEPSVAAVREVCEEAGVKGTL--GRLVGI---------F 106 (194)
T ss_dssp EEEEEES-STTCCEEEEEECSSCT---TSEECSEEECCTT-CCHHHHHHHHHHHHHCEEEEE--EEEEEE---------E
T ss_pred EEEEEEE-ECCCCEEEEEEEeCCC---CcEECCCCcCCCC-cCHHHHHHHHHHHHhCCcccc--ceEEEE---------E
Confidence 3444332 2334579999987754 3699999999998 999999999999999999853 334442 2
Q ss_pred ecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCChhHHHH
Q 021805 227 FPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAKVLTA 290 (307)
Q Consensus 227 ~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D~ktl~a 290 (307)
+. + .....+++|++....... .. .....+..+++|++++++.+++.+++.+.+
T Consensus 107 ~~-~-~~~~~~~~f~~~~~~~~~-------~~--~~~~e~~~~~~W~~~~el~~~l~~~~~~~~ 159 (194)
T 2fvv_A 107 EN-Q-ERKHRTYVYVLIVTEVLE-------DW--EDSVNIGRKREWFKIEDAIKVLQYHKPVQA 159 (194)
T ss_dssp EE-T-TTTEEEEEEEEEEEEECS-------SC--HHHHHHCCCEEEEEHHHHHHHHTTTCHHHH
T ss_pred Ec-C-CCceEEEEEEEEEccccC-------CC--CCcccccceEEEEEHHHHHHHHhcCcHHHH
Confidence 21 2 124456777765321100 00 001123457899999999998876554433
No 53
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.56 E-value=4.1e-14 Score=123.40 Aligned_cols=104 Identities=17% Similarity=0.220 Sum_probs=63.5
Q ss_pred eEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCc-ccc--cceeeccccccCCCCceeecCCCcc--
Q 021805 159 TYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQ-LKL--EDMIDLTAFLYPSTGCKFFPSAGGC-- 233 (307)
Q Consensus 159 ~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~-i~~--~~L~~L~~l~~~~~~~~~~~spg~~-- 233 (307)
++|||+++.+. ..|++|||++|+| |++.+||+||++||||++ +.. ..+..+ .++..++..
T Consensus 58 ~~vLL~~r~~~----g~w~lPgG~ve~g-Es~~eaa~REl~EEtGl~~~~~~~~~~~~~----------~~~~~~~~~~~ 122 (197)
T 3fcm_A 58 NKFLMIHHNIY----NSWAWTGGHSDNE-KDQLKVAIKELKEETGVKNPTPLLDKAFAL----------DVLTVNGHIKR 122 (197)
T ss_dssp CEEEEEEETTT----TEEECEEEECTTC-CBHHHHHHHHHHHHHCCSSCEESCSSCSEE----------EEEEECCEEET
T ss_pred CEEEEEEecCC----CCEECCccccCCC-CCHHHHHHHHHHHHHCCCcccccCCCceEE----------EEeeecCcccc
Confidence 47999886532 3799999999998 999999999999999998 421 011111 122222211
Q ss_pred -------ceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCChhH
Q 021805 234 -------DEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAKV 287 (307)
Q Consensus 234 -------~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D~kt 287 (307)
......|++..... . .-..+++|..+++|++++++.+++.+...
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~~E~~~~~W~~~~el~~~~~~~~~ 173 (197)
T 3fcm_A 123 GKYVSSHLHLNLTYLIECSED--------E--TLMLKEDENSGVMWIPFNEISKYCSEPHM 173 (197)
T ss_dssp TEEECCEEEEEEEEEEECCTT--------S--CCCCCC----CEEEEEGGGHHHHCCCGGG
T ss_pred CcccCCceeEEEEEEEEeCCC--------c--ccCCCcccccceEEccHHHHHhhcCCHHH
Confidence 11113455543211 1 11235688899999999999999885443
No 54
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.55 E-value=6.5e-14 Score=116.45 Aligned_cols=97 Identities=16% Similarity=0.203 Sum_probs=62.8
Q ss_pred EEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEEEE
Q 021805 161 AILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLF 240 (307)
Q Consensus 161 VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~lf 240 (307)
+||+++...+ ... |++|||++|+| |++.+||+||++||||+++....+.... .+..+......+++|
T Consensus 25 vLl~~r~~~~-~~g-w~lPgG~ve~g-E~~~~aa~RE~~EEtGl~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 91 (155)
T 2b06_A 25 MQYRAPENNR-WSG-YAFPGGHVEND-EAFAESVIREIYEETGLTIQNPQLVGIK----------NWPLDTGGRYIVICY 91 (155)
T ss_dssp EEEEC------CCE-EECCCCBCCTT-SCHHHHHHHHHHHHHSEEEESCEEEEEE----------EEECTTSCEEEEEEE
T ss_pred EEEEECCCCC-CCC-EeccceecCCC-CCHHHHHHHHHHHHhCccccCCcEEEEE----------eeccCCCceEEEEEE
Confidence 5554443332 233 89999999998 9999999999999999998643333222 122222344556666
Q ss_pred EEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 241 LYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 241 ~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
.+.... + .....|..+++|++++++.++..
T Consensus 92 ~~~~~~---------~----~~~~~e~~~~~W~~~~el~~~~~ 121 (155)
T 2b06_A 92 KATEFS---------G----TLQSSEEGEVSWVQKDQIPNLNL 121 (155)
T ss_dssp EECEEE---------E----CCCCBTTBEEEEEEGGGGGGSCB
T ss_pred EEEecC---------C----CCCCCcceeeEEeeHHHhhhCCC
Confidence 654321 1 12346778999999999998765
No 55
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.54 E-value=4.6e-15 Score=119.00 Aligned_cols=99 Identities=16% Similarity=0.071 Sum_probs=68.0
Q ss_pred EEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEEE
Q 021805 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISL 239 (307)
Q Consensus 160 ~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~l 239 (307)
++||+++.+.+.....|++|||.+|+| |++.+||+||++||||+.+.. +..++.+ .+..+ .....+++
T Consensus 17 ~vLl~~r~~~~~~~g~w~~PgG~~e~g-E~~~~aa~RE~~EE~G~~~~~--~~~~~~~--------~~~~~-~~~~~~~~ 84 (129)
T 1mut_A 17 EIFITRRAADAHMANKLEFPGGKIEMG-ETPEQAVVRELQEEVGITPQH--FSLFEKL--------EYEFP-DRHITLWF 84 (129)
T ss_dssp EEEEEECSSCCSSSCCEECCCCCSSSC-SSTTHHHHHHHHTTTCCSSCE--ECCCCCC--------BCCCS-SCEEECCC
T ss_pred EEEEEEeCCCCCCCCeEECCccCcCCC-CCHHHHHHHHHHHHhCCcccc--ceEEEEE--------EEecC-CceEEEEE
Confidence 698888766544456899999999998 999999999999999999853 3333321 12112 12233455
Q ss_pred EEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 240 FLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 240 f~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
|.+.... + ....+|..++.|++++++.++..
T Consensus 85 ~~~~~~~---------~----~~~~~e~~~~~W~~~~el~~~~~ 115 (129)
T 1mut_A 85 WLVERWE---------G----EPWGKEGQPGEWMSLVGLNADDF 115 (129)
T ss_dssp EEEEECS---------S----CCCCCSSCCCEEEESSSCCTTTS
T ss_pred EEEEccC---------C----ccCCcccceeEEeCHHHcccccC
Confidence 6655321 1 12456777899999999988754
No 56
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.53 E-value=4.7e-14 Score=117.32 Aligned_cols=100 Identities=14% Similarity=0.119 Sum_probs=66.8
Q ss_pred EEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCcc-ceEEE
Q 021805 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGC-DEEIS 238 (307)
Q Consensus 160 ~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~-~e~i~ 238 (307)
+|||+++ ...|++|||++|+| |++.+||+||++||||+++...++..... ..++..+.. ....+
T Consensus 31 ~vLl~~r------~~~w~lPgG~ve~g-E~~~~aa~REl~EEtGl~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 95 (154)
T 2pqv_A 31 KLLVTKD------KGKYYTIGGAIQVN-ESTEDAVVREVKEELGVKAQAGQLAFVVE--------NRFEVDGVSYHNIEF 95 (154)
T ss_dssp EEEEEEE------TTEEECEEEECBTT-CCHHHHHHHHHHHHHCCCEEEEEEEEEEE--------EEEEETTEEEEEEEE
T ss_pred EEEEEec------CCeEECcccCcCCC-CCHHHHHHHHHHHHhCCeeeeceEEEEEe--------eeecCCCCcceEEEE
Confidence 5888876 24799999999998 99999999999999999986444333321 133333332 22344
Q ss_pred EEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 239 LFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 239 lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
+|.+..... ......+++|..++.|++++++.++..
T Consensus 96 ~f~~~~~~~---------~~~~~~~~~e~~~~~W~~~~el~~~~~ 131 (154)
T 2pqv_A 96 HYLVDLLED---------APLTMQEDEKRQPCEWIDLDKLQNIQL 131 (154)
T ss_dssp EEEEEESSC---------CCSEEEETTEEEEEEEEEGGGGGGSCE
T ss_pred EEEEEecCC---------CCcccCCCCceeeEEEeEHHHHhhcCc
Confidence 566654211 100012456788999999999988653
No 57
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.53 E-value=6.8e-14 Score=128.97 Aligned_cols=115 Identities=19% Similarity=0.302 Sum_probs=79.6
Q ss_pred EEeCCEEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccC
Q 021805 141 FARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYP 220 (307)
Q Consensus 141 ~~r~~aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~ 220 (307)
|.+...++++++ .+++ +|||++|.+.+. ..|++|||.+|+| |++++||+||++||||+++. .+..++..
T Consensus 136 yp~~~~~viv~v-~~~~--~vLL~rr~~~~~--g~w~lPgG~vE~G-Et~eeAa~REv~EEtGl~v~--~~~~~~~~--- 204 (269)
T 1vk6_A 136 YPQIAPCIIVAI-RRDD--SILLAQHTRHRN--GVHTVLAGFVEVG-ETLEQAVAREVMEESGIKVK--NLRYVTSQ--- 204 (269)
T ss_dssp CCCCEEEEEEEE-EETT--EEEEEEETTTCS--SCCBCEEEECCTT-CCHHHHHHHHHHHHHCCEEE--EEEEEEEE---
T ss_pred cCCCCcEEEEEE-EeCC--EEEEEEecCCCC--CcEECCcCcCCCC-CCHHHHHHHHHHHHhCceee--eEEEEEEE---
Confidence 334333333333 3444 699999877653 4699999999998 99999999999999999985 45555431
Q ss_pred CCCceeecCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCCh
Q 021805 221 STGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDA 285 (307)
Q Consensus 221 ~~~~~~~~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D~ 285 (307)
.++.+ +..+.+|++.... +.. ..+++|..++.|++++|+..+..+.
T Consensus 205 -----~~~~~---~~~~~~f~a~~~~---------~~~--~~~~~E~~~~~W~~~~el~~l~~~~ 250 (269)
T 1vk6_A 205 -----PWPFP---QSLMTAFMAEYDS---------GDI--VIDPKELLEANWYRYDDLPLLPPPG 250 (269)
T ss_dssp -----EEETT---EEEEEEEEEEEEE---------CCC--CCCTTTEEEEEEEETTSCCSCCCTT
T ss_pred -----ecCCC---CEEEEEEEEEECC---------CCc--CCCCcceEEEEEEEHHHhhhcccCc
Confidence 23322 3466677775432 111 2356789999999999998877654
No 58
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.52 E-value=6.1e-14 Score=125.29 Aligned_cols=121 Identities=17% Similarity=0.136 Sum_probs=73.5
Q ss_pred eEEEccceecCCCCC-CHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCcc-ceEEEEEEEEEechhHHH
Q 021805 174 VILELPAGMLDDDKG-DFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGC-DEEISLFLYRGRVDKEII 251 (307)
Q Consensus 174 ~~wElPaG~vD~g~E-t~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~-~e~i~lf~~~~~~~~~~i 251 (307)
..|+||||++|+| | ++.+||+||++||||+++....+..+.. ++..++.. ....++|++... ....
T Consensus 75 g~w~lPGG~ve~g-E~t~~eaa~REl~EEtGl~~~~~~l~~l~~---------~~~~~~~~~~~~~~~f~~~l~--~~~~ 142 (217)
T 2xsq_A 75 GRLGFPGGFVDTQ-DRSLEDGLNRELREELGEAAAAFRVERTDY---------RSSHVGSGPRVVAHFYAKRLT--LEEL 142 (217)
T ss_dssp SCEECSEEECCTT-CSSHHHHHHHHHHHHHCGGGGGCCCCGGGE---------EEEEECSSSSEEEEEEEEECC--HHHH
T ss_pred CeEECCceecCCC-CCCHHHHHHHHHHHHHCCCCccceeEEEEE---------EeecCCCCCeEEEEEEEEEec--cccc
Confidence 4799999999998 9 9999999999999999986434444432 33334433 334445555432 2222
Q ss_pred HHhccCC-CccCCCCceEEEEEEchhhHhhccC-------ChhH-HHHHHHHHHHHhcCCCCCC
Q 021805 252 MQLQGKE-TGLRDHGELIKVRVVPYRELWRTTP-------DAKV-LTAIALYEMASKEELLPSR 306 (307)
Q Consensus 252 ~~~~g~~-~g~~~~~E~i~v~wvpleel~~~i~-------D~kt-l~al~L~~~~~~~g~lp~~ 306 (307)
....... ....++.|.+++.|+|++++.+... +... -+..++.+.++..|++|+.
T Consensus 143 ~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d~~~~~P~~L~~~~l~~~~~~i~~~l~~~~~~~~~ 206 (217)
T 2xsq_A 143 LAVEAGATRAKDHGLEVLGLVRVPLYTLRDGVGGLPTFLENSFIGSAREQLLEALQDLGLLQSG 206 (217)
T ss_dssp HHHHHHGGGSTTBTTTEEEEEECCCSBCTTSSTBHHHHTTSCBCTTHHHHHHHHHHHTTTTC--
T ss_pred eecccccccccccCCceeeEEEEEHHHhhhccccCcHHHHHHHHHHHHHHHHHHHHhcCCCCHH
Confidence 1111100 0122467899999999999873321 1000 1224567788889998863
No 59
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.51 E-value=3.4e-14 Score=122.94 Aligned_cols=114 Identities=11% Similarity=0.105 Sum_probs=74.2
Q ss_pred EEEEEEEEecCCceEEEEEEeeecC-CCCeEEEc-cceecCCCCCCHHHHHHHHHHHHhCCcccccce-eeccccccCCC
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVP-TGRVILEL-PAGMLDDDKGDFVGTAVREVEEETGIQLKLEDM-IDLTAFLYPST 222 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p-~g~~~wEl-PaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L-~~L~~l~~~~~ 222 (307)
+|+++++ ++++ ++||+++.... .....|++ |||++|+| |++.+||+||++||||+++.. + ..++.+.
T Consensus 34 ~v~~~i~-~~~g--~vLl~~R~~~~~~~~g~w~~~PgG~ve~g-Et~~~aa~REl~EEtGl~~~~--~~~~~~~~~---- 103 (190)
T 1hzt_A 34 AFSSWLF-NAKG--QLLVTRRALSKKAWPGVWTNSVCGHPQLG-ESNEDAVIRRCRYELGVEITP--PESIYPDFR---- 103 (190)
T ss_dssp CEEEEEE-CTTC--CEEEEEECTTCSSSTTCEEESEEECCCTT-CCHHHHHHHHHHHHHCCCBSC--CEEEETTCE----
T ss_pred EEEEEEE-cCCC--EEEEEEeCCCCCCCCCcccCcccccCCCC-CCHHHHHHHHHHHHHCCCchh--hheeeeeEE----
Confidence 4555544 2344 58887654321 12357999 99999998 999999999999999999853 4 3443320
Q ss_pred CceeecCCCc--cceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 223 GCKFFPSAGG--CDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 223 ~~~~~~spg~--~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
..+..+++ ....+++|++.. + +.. ..+++|..+++|++++++.+++.
T Consensus 104 --~~~~~~~~~~~~~~~~~f~~~~--~--------~~~--~~~~~E~~~~~W~~~~el~~~~~ 152 (190)
T 1hzt_A 104 --YRATDPSGIVENEVCPVFAART--T--------SAL--QINDDEVMDYQWCDLADVLHGID 152 (190)
T ss_dssp --EEEECTTSCEEEEECCEEEEEB--C--------SCC--CCCTTTEEEEEEECHHHHHHHHH
T ss_pred --EEeeCCCCCcceEEEEEEEEec--C--------CCC--cCCccceeeEEEecHHHHHHHHH
Confidence 11122222 244556676653 2 111 23577999999999999998865
No 60
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.50 E-value=4.7e-13 Score=113.56 Aligned_cols=118 Identities=17% Similarity=0.132 Sum_probs=73.8
Q ss_pred EEEEEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCce
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCK 225 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~ 225 (307)
+|+++++ +.++ +|||+++.+ ...|++|||++|+| |++.+||+||++||||+++.. +..++.+.. ..
T Consensus 10 ~v~~~i~-~~~~--~vLl~~r~~----~~~w~~p~G~~e~g-E~~~~aa~RE~~EE~G~~~~~--~~~~~~~~~----~~ 75 (164)
T 2kdv_A 10 NVGIVIC-NRQG--QVMWARRFG----QHSWQFPQGGINPG-ESAEQAMYRELFEEVGLSRKD--VRILASTRN----WL 75 (164)
T ss_dssp EEEEEEE-CTTS--EEEEEEETT----CCCEECCEEECCTT-CCHHHHHHHHHHHHHCCCGGG--EEEEEECSS----CE
T ss_pred EEEEEEE-ccCC--EEEEEEEcC----CCeEECCeeecCCC-CCHHHHHHHHHHHHHCCCccc--eEEEEEecc----ee
Confidence 4555544 2333 688887643 34799999999998 999999999999999999853 444443100 00
Q ss_pred eecCC----------CccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 226 FFPSA----------GGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 226 ~~~sp----------g~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
.|..+ .......++|++........+ . .. ...+.|..+++|++++++.+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~---~--l~-~~~~~E~~~~~W~~~~e~~~~l~ 137 (164)
T 2kdv_A 76 RYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEI---N--MQ-TSSTPEFDGWRWVSYWYPVRQVV 137 (164)
T ss_dssp EEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGC---C--SC-SSSSCSEEEEEEEETTTGGGGSC
T ss_pred EEecCcceeeeccCcccccceeEEEEEEecCCcccc---c--cC-CCCCchhceEEEecHHHhhhhhh
Confidence 12222 223345677877643221111 0 00 01346888999999999877654
No 61
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.50 E-value=2.3e-13 Score=129.72 Aligned_cols=113 Identities=18% Similarity=0.167 Sum_probs=71.2
Q ss_pred CCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCC----
Q 021805 156 EGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAG---- 231 (307)
Q Consensus 156 ~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg---- 231 (307)
+++.+|||+++.+. ..|+||||++|+| |++.+||+||++||||+++....+..... ..++.+|
T Consensus 35 ~~~~~vLLv~r~~~----g~W~lPgG~ve~g-Es~~~AA~REl~EEtGl~~~~~~~l~~~~--------~~~~~~g~~~~ 101 (364)
T 3fjy_A 35 LDSIEVCIVHRPKY----DDWSWPKGKLEQN-ETHRHAAVREIGEETGSPVKLGPYLCEVE--------YPLSEEGKKTR 101 (364)
T ss_dssp HTTEEEEEEEETTT----TEEECCEEECCTT-CCHHHHHHHHHHHHHSCCEEEEEEEEEEC-------------------
T ss_pred CCceEEEEEEcCCC----CCEECCcCCCCCC-CCHHHHHHHHHHHHhCCeeeeccccceEE--------EeccCCCcccc
Confidence 34458999877332 4799999999998 99999999999999999986433322211 1222222
Q ss_pred ------ccceEEEEEEEEEechhHHHH---HhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 232 ------GCDEEISLFLYRGRVDKEIIM---QLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 232 ------~~~e~i~lf~~~~~~~~~~i~---~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
.....+++|++........+. .+... ...+++|..+++|++++++.+++.
T Consensus 102 ~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~--~~~~~~E~~~~~W~~~~e~~~~~~ 160 (364)
T 3fjy_A 102 HSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPV--HRADVGEINDIVWVSVREARKILS 160 (364)
T ss_dssp ----------CEEEEEEEECCHHHHHTTHHHHCCC--CCCCTTTCCEEEEEEHHHHHHHCS
T ss_pred cccccccCceEEEEEEEEecCCccccccccccCcc--ccCCccceeeeecCcHHHHHHHhc
Confidence 124566777776543211100 01111 123668999999999999999887
No 62
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.47 E-value=2.5e-13 Score=118.00 Aligned_cols=99 Identities=19% Similarity=0.170 Sum_probs=64.2
Q ss_pred EEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccc--eEE
Q 021805 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCD--EEI 237 (307)
Q Consensus 160 ~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~--e~i 237 (307)
+|||+++.+ ...|++|||++|+| |++.+||+||++||||+++...++..+.. ..+...+... ..+
T Consensus 16 ~vLL~~r~~----~g~W~lPGG~ve~g-Es~~~aa~REl~EEtGl~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 82 (188)
T 3fk9_A 16 QVLLLQKPR----RGWWVAPGGKMEAG-ESILETVKREYWEETGITVKNPELKGIFS--------MVIFDEGKIVSEWML 82 (188)
T ss_dssp EEEEEECTT----TCCEECCEEECCTT-CCHHHHHHHHHHHHHSCEESSCEEEEEEE--------EEEEETTEEEEEEEE
T ss_pred EEEEEEeCC----CCeEECCeecccCC-CCHHHHHHHHHHHHHCCCCCCceEEEEEE--------EEecCCCcceEEEEE
Confidence 688887532 34799999999998 99999999999999999986544433322 1222222111 144
Q ss_pred EEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 238 SLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 238 ~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
++|.+.... +. .....|..++.|++++++.++..
T Consensus 83 ~~f~a~~~~---------~~---~~~~~e~~~~~W~~~~el~~~~l 116 (188)
T 3fk9_A 83 FTFKATEHE---------GE---MLKQSPEGKLEWKKKDEVLELPM 116 (188)
T ss_dssp EEEEESCEE---------SC---CCSEETTEEEEEEEGGGGGGSCC
T ss_pred EEEEEECCC---------CC---CcCCCCCEeEEEEEHHHhhhCCC
Confidence 555553221 11 11233446899999999987654
No 63
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.47 E-value=2.4e-13 Score=127.30 Aligned_cols=105 Identities=16% Similarity=0.321 Sum_probs=66.2
Q ss_pred EEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCcc---ceE
Q 021805 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGC---DEE 236 (307)
Q Consensus 160 ~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~---~e~ 236 (307)
+|||+++.+.+ +...|++|||++|+| |++.+||+||++||||+++....+. +.+.. ...|..|+.. ...
T Consensus 215 ~vLL~~r~~~~-~~g~w~lPgG~ve~g-E~~~~aa~REl~EEtGl~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~ 286 (341)
T 2qjo_A 215 HVLMVRRQAKP-GLGLIALPGGFIKQN-ETLVEGMLRELKEETRLKVPLPVLR--GSIVD----SHVFDAPGRSLRGRTI 286 (341)
T ss_dssp EEEEEECCSSS-STTCEECSEEECCTT-SCHHHHHHHHHHHHHCCSSCHHHHH--HTEEE----EEEECCTTSCTTSCEE
T ss_pred EEEEEEecCCC-CCCeEECCCCcCCCC-CCHHHHHHHHHhhhhCCcccccccc--ccccc----eEEEeCCCCCCCCcEE
Confidence 69998887654 345799999999998 9999999999999999998643221 10000 0245555442 234
Q ss_pred EEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhc
Q 021805 237 ISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRT 281 (307)
Q Consensus 237 i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~ 281 (307)
+++|++.... +......+++|..++.|++++++.++
T Consensus 287 ~~~f~~~~~~---------~~~~~~~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 287 THAYFIQLPG---------GELPAVKGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp EEEEEEECCS---------SSCCCCC------CEEEEEHHHHHHT
T ss_pred EEEEEEEecC---------CCcCccCCCCceeeEEEeeHHHHhhh
Confidence 5667765421 11111235678889999999999885
No 64
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.47 E-value=1.6e-13 Score=114.96 Aligned_cols=44 Identities=27% Similarity=0.409 Sum_probs=37.9
Q ss_pred EEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccc
Q 021805 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKL 208 (307)
Q Consensus 160 ~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~ 208 (307)
+|||+++.+ ...|++|||++|+| |++.+||+||++||||+++..
T Consensus 13 ~vLL~~r~~----~g~W~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~ 56 (156)
T 1k2e_A 13 KVLLVKHKR----LGVYIYPGGHVEHN-ETPIEAVKREFEEETGIVVEP 56 (156)
T ss_dssp EEEEEECTT----TCSEECSEEECCTT-CCHHHHHHHHHHHHHSEEEEE
T ss_pred EEEEEEEcC----CCcEECCeeecCCC-CCHHHHHHHHHHHHHCCccee
Confidence 588887643 23699999999998 999999999999999999864
No 65
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.47 E-value=5.2e-13 Score=125.83 Aligned_cols=104 Identities=18% Similarity=0.214 Sum_probs=71.2
Q ss_pred EEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceee-ccccccCCCCceeecCCCccc---e
Q 021805 160 YAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMID-LTAFLYPSTGCKFFPSAGGCD---E 235 (307)
Q Consensus 160 ~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~-L~~l~~~~~~~~~~~spg~~~---e 235 (307)
+|||+++.+.+ +...|++|||++|+| |++++||+||++||||+++....+.. +.. ...|..|+... .
T Consensus 220 ~vLL~~r~~~~-~~g~w~lPgG~ve~g-Et~~~aa~REl~EEtGl~v~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 290 (352)
T 2qjt_B 220 HILMVQRKAHP-GKDLWALPGGFLECD-ETIAQAIIRELFEETNINLTHEQLAIAKRC-------EKVFDYPDRSVRGRT 290 (352)
T ss_dssp EEEEEEESSSS-STTCEECSEEECCTT-SCHHHHHHHHHHHHHCCSCCHHHHHHHEEE-------EEEECCTTSCTTSEE
T ss_pred EEEEEEEcCCC-CCCeEECCCCcCCCC-CCHHHHHHHHHHHhhCCCcccchhcceeee-------eEEecCCCCCCCccE
Confidence 69999887655 345799999999998 99999999999999999986432210 000 12455555422 3
Q ss_pred EEEEEEEEEechhHHHHHhccC-CCccCCCCceEEEEEEch-hhHhhc
Q 021805 236 EISLFLYRGRVDKEIIMQLQGK-ETGLRDHGELIKVRVVPY-RELWRT 281 (307)
Q Consensus 236 ~i~lf~~~~~~~~~~i~~~~g~-~~g~~~~~E~i~v~wvpl-eel~~~ 281 (307)
.+++|++.... +. .....+++|..+++|+++ +++.++
T Consensus 291 ~~~~f~~~~~~---------~~~~~~~~~~~E~~~~~W~~~~~el~~~ 329 (352)
T 2qjt_B 291 ISHVGLFVFDQ---------WPSLPEINAADDAKDVKWISLGSNIKNI 329 (352)
T ss_dssp EEEEEEEEECS---------CSSCCCCCCCTTEEEEEEEESSHHHHHT
T ss_pred EEEEEEEEEeC---------CCCCCccCCCccceEEEEecHHHHHHhh
Confidence 45667665421 11 011235688999999999 999885
No 66
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.46 E-value=6.1e-13 Score=113.28 Aligned_cols=88 Identities=18% Similarity=0.263 Sum_probs=59.5
Q ss_pred cCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccc
Q 021805 155 SEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCD 234 (307)
Q Consensus 155 ~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~ 234 (307)
+++ ++||+++. ...|++|||++|+| |++.+||+||++||||+++. .+..++ .|..+.
T Consensus 25 ~~~--~vLL~~r~-----~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~--~~~~l~----------~~~~~~--- 81 (163)
T 3f13_A 25 MPD--GVLVTASR-----GGRYNLPGGKANRG-ELRSQALIREIREETGLRIN--SMLYLF----------DHITPF--- 81 (163)
T ss_dssp ETT--EEEEEECC--------BBCSEEECCTT-CCHHHHHHHHHHHHHCCCCC--EEEEEE----------EEECSS---
T ss_pred eCC--EEEEEEEC-----CCeEECCceeCCCC-CCHHHHHHHHHHHHHCcccc--eeEEEE----------EEecCC---
Confidence 444 58888663 24799999999998 99999999999999999985 344443 344443
Q ss_pred eEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhH
Q 021805 235 EEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYREL 278 (307)
Q Consensus 235 e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel 278 (307)
...++|++.. + +.. ...+|..++.|++.+++
T Consensus 82 ~~~~~f~~~~--~--------~~~---~~~~E~~~~~W~~~~~~ 112 (163)
T 3f13_A 82 NAHKVYLCIA--Q--------GQP---KPQNEIERIALVSSPDT 112 (163)
T ss_dssp EEEEEEEEEC-----------CCC---CCCTTCCEEEEESSTTC
T ss_pred eEEEEEEEEE--C--------CcC---ccCCCceEEEEECcccc
Confidence 5566677642 2 211 12348889999995444
No 67
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.44 E-value=1e-12 Score=109.55 Aligned_cols=100 Identities=8% Similarity=0.023 Sum_probs=65.7
Q ss_pred eEEEEEEeeecCCCCeEEEccceecCCCCCCHH-HHHHHHHHHHhC-CcccccceeeccccccCCCCceeecCCCccceE
Q 021805 159 TYAILTEQVRVPTGRVILELPAGMLDDDKGDFV-GTAVREVEEETG-IQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEE 236 (307)
Q Consensus 159 ~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~-~AA~REl~EETG-l~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~ 236 (307)
++|||+++.........|+||||.+|.| |++. +||+||++|||| +.+. .+..++.+ .+.... ....
T Consensus 34 ~~vLl~~R~~~~~~~g~w~~PgG~~e~g-E~~~~~a~~REl~EE~g~l~~~--~~~~l~~~--------~~~~~~-~~~~ 101 (155)
T 1x51_A 34 AQILLVQRPNSGLLAGLWEFPSVTWEPS-EQLQRKALLQELQRWAGPLPAT--HLRHLGEV--------VHTFSH-IKLT 101 (155)
T ss_dssp EEEEEEECCCCSTTCSCEECCEEECCSS-HHHHHHHHHHHHHHHSCCCCST--TCEECCCB--------CCBCSS-CEEE
T ss_pred CEEEEEECCCCCCCCceecCCccccCCC-CCHHHHHHHHHHHHHhCCccee--eeeecceE--------EEecCC-ccEE
Confidence 4788887655434445899999999998 9996 999999999999 8764 33344321 111111 1234
Q ss_pred EEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 237 ISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 237 i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
+++|.+.... + .....|..++.|++++++.++..
T Consensus 102 ~~~~~~~~~~---------~----~~~~~e~~~~~W~~~~el~~~~~ 135 (155)
T 1x51_A 102 YQVYGLALEG---------Q----TPVTTVPPGARWLTQEEFHTAAV 135 (155)
T ss_dssp EEEEEEECSS---------C----CCCCCCCTTEEEEEHHHHHHSCC
T ss_pred EEEEEEEEcC---------C----CCCCCCCCccEEccHHHhhhcCC
Confidence 5566654311 1 11234555789999999988765
No 68
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.35 E-value=7.2e-13 Score=118.07 Aligned_cols=103 Identities=17% Similarity=0.160 Sum_probs=63.4
Q ss_pred cCCceEEEEEEeeecCC---CCeEEEc-cceecCCCCCC--H----HHHHHHHHHHHhCCcccccceeeccccccCCCCc
Q 021805 155 SEGETYAILTEQVRVPT---GRVILEL-PAGMLDDDKGD--F----VGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGC 224 (307)
Q Consensus 155 ~~g~~~VLLvrQ~R~p~---g~~~wEl-PaG~vD~g~Et--~----~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~ 224 (307)
+++ ++||+++...+. -...|++ |||++|+| |+ + ++||+||++||||+++. .+..++..
T Consensus 77 ~~g--rvLl~~R~~~~~e~~~~g~w~~gPGGhVE~G-Es~~p~EtleeAa~REl~EEtGl~v~--~~~~ig~~------- 144 (211)
T 3e57_A 77 DGD--RVLITKRTTKQSEKRLHNLYSLGIGGHVREG-DGATPREAFLKGLEREVNEEVDVSLR--ELEFLGLI------- 144 (211)
T ss_dssp ETT--EEEEEEC------------CBSSEECCCBGG-GCSSHHHHHHHHHHHHHHHHEEEEEE--EEEEEEEE-------
T ss_pred ECC--EEEEEEECCCCCcccccCCcccccceEEeCC-CCCCchhhHHHHHHHHHHHHhCCeee--ccEEEEEE-------
Confidence 445 588877654431 1136888 99999998 98 4 99999999999999885 34444321
Q ss_pred eeecC-CCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 225 KFFPS-AGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 225 ~~~~s-pg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
.+.. +.+......+|.|... . + .+.+.|..++.|++++++.++..
T Consensus 145 -~~~~~~~~~~~l~~~f~~~~~-~--------g----~~~~~E~~~~~W~~~~eL~~~~~ 190 (211)
T 3e57_A 145 -NSSTTEVSRVHLGALFLGRGK-F--------F----SVKEKDLFEWELIKLEELEKFSG 190 (211)
T ss_dssp -ECCSSHHHHTEEEEEEEEEEE-E--------E----EESCTTTCEEEEEEHHHHHHHGG
T ss_pred -eccCCCCCeEEEEEEEEEEeC-C--------c----eeCCCCeEEEEEEEHHHHHHhHh
Confidence 1211 1122223345766543 1 1 22456677899999999998753
No 69
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.33 E-value=7.8e-12 Score=116.88 Aligned_cols=141 Identities=16% Similarity=0.167 Sum_probs=91.6
Q ss_pred EEEEEEEEecCCceEEEEEEeeecCC---CCeEE-EccceecCCCCCCHHHHHHHHHHHHhCCcccc-cceeeccccccC
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVPT---GRVIL-ELPAGMLDDDKGDFVGTAVREVEEETGIQLKL-EDMIDLTAFLYP 220 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p~---g~~~w-ElPaG~vD~g~Et~~~AA~REl~EETGl~i~~-~~L~~L~~l~~~ 220 (307)
+|-|.++..+++..++++.+ |... ..++| .+|||++++| |++.+||+||++||+|+.+.. ..+..++.+.
T Consensus 120 ~vh~~~~~~~~~~~~lll~r--Rs~~K~~~PG~wd~svaG~i~~G-Es~~eaA~REl~EElGI~~~~~~~l~~~g~i~-- 194 (300)
T 3dup_A 120 GVHLNGYVGAGADLHLWIGR--RSPDKSVAPGKLDNMVAGGQPAD-LSLRQNLIKECAEEADLPEALARQAIPVGAIT-- 194 (300)
T ss_dssp EEEEEEEESCGGGCEEEEEE--ECTTCSSSTTCEEESEEEECCTT-SCHHHHHHHHHHHHHCCCHHHHTTCEEEEEEE--
T ss_pred EEEEEEEEecCCeeEEEEEe--CCCcccCCCCccccccccCCCCC-CCHHHHHHHHHHHHhCCChhhhhhccccceEE--
Confidence 55666665433333677754 4333 24478 6999999998 999999999999999998742 1233333321
Q ss_pred CCCceeecC-CCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCC-hh--HHHHHHHHHH
Q 021805 221 STGCKFFPS-AGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPD-AK--VLTAIALYEM 296 (307)
Q Consensus 221 ~~~~~~~~s-pg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D-~k--tl~al~L~~~ 296 (307)
..+.+ +|...+.+++|.+.. +.+ ..-..+++|..+++|++++|+.+++.+ ++ .-.++.+...
T Consensus 195 ----y~~~~~~G~~~E~~~vy~~~l--~~~--------~~p~~~~~EV~~~~~v~~~El~~~l~~pg~F~p~~~lV~ldf 260 (300)
T 3dup_A 195 ----YCMESPAGIKPDTLFLYDLAL--PED--------FRPHNTDGEMADFMLWPAAKVVEAVRTTEAFKFNVNLTVIDF 260 (300)
T ss_dssp ----EEEEETTEEEEEEEEEEEEEC--CTT--------CCCCCTTSSEEEEEEEEHHHHHHHHHHCCCBCTTHHHHHHHH
T ss_pred ----EEEecCCCeEEEEEEEEEEEe--cCC--------CcCCCCchHhheEEEECHHHHHHHHhcCCCcCccHHHHHHHH
Confidence 12333 344666667775543 211 111347899999999999999988764 32 2244456688
Q ss_pred HHhcCCCCC
Q 021805 297 ASKEELLPS 305 (307)
Q Consensus 297 ~~~~g~lp~ 305 (307)
+.++|++-+
T Consensus 261 l~RhG~i~~ 269 (300)
T 3dup_A 261 AIRHGLIDP 269 (300)
T ss_dssp HHHTTSSCT
T ss_pred HHHhCCcCC
Confidence 888898754
No 70
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.25 E-value=3.6e-11 Score=111.83 Aligned_cols=123 Identities=16% Similarity=0.137 Sum_probs=72.1
Q ss_pred eEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCccccc---------ceeeccccccCCC-Cceeec
Q 021805 159 TYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLE---------DMIDLTAFLYPST-GCKFFP 228 (307)
Q Consensus 159 ~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~---------~L~~L~~l~~~~~-~~~~~~ 228 (307)
.+|||+++... ..|+||||++|+| |++.+||+||++||||+.+... .+..+.... +.. ....+.
T Consensus 139 l~vLl~~r~~~----g~W~lPGG~Ve~G-Es~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~-g~~vy~~~~~ 212 (292)
T 1q33_A 139 LQFVAIKRKDC----GEWAIPGGMVDPG-EKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQD-HLVIYKGYVD 212 (292)
T ss_dssp EEEEEEECTTT----CSEECCCEECCTT-CCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTS-EEEEEEEECC
T ss_pred eEEEEEEecCC----CcEeCCCcccCCC-CCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcc-cceeeccccc
Confidence 36888765432 3699999999998 9999999999999999984211 222232100 000 001233
Q ss_pred CCCccce---EEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCChhHHHHHHH
Q 021805 229 SAGGCDE---EISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAKVLTAIAL 293 (307)
Q Consensus 229 spg~~~e---~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D~ktl~al~L 293 (307)
.|+..+. ...+|.+.... .+.+ +... ....+|..+++|++++++.++..+.+.+...++
T Consensus 213 dpr~~d~~~~~~~~f~~~~~~-g~~~----~~~~-~~~~~E~~~~~W~~~del~~L~~~h~~il~~~~ 274 (292)
T 1q33_A 213 DPRNTDNAWMETEAVNYHDET-GEIM----DNLM-LEAGDDAGKVKWVDINDKLKLYASHSQFIKLVA 274 (292)
T ss_dssp CTTCCSSEEEEEEEEEEEESS-STTT----TTCC-CCCCTTCSEEEEEECCTTCCCSTTHHHHHHHHH
T ss_pred CCCCCcccEEEEEEEEEEeCC-Cccc----cccc-cCCCCccceEEEEEcccCcccCHhHHHHHHHHH
Confidence 4433222 22334443211 1000 0001 235678899999999999988888877665443
No 71
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.20 E-value=5.3e-11 Score=107.39 Aligned_cols=114 Identities=21% Similarity=0.172 Sum_probs=73.5
Q ss_pred EEEEEEEEecCCceEEEEEEeeecCC---CCeEEEccc-eecCCCC-----CC---HHHHHHHHHHHHhCCcccc---cc
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVPT---GRVILELPA-GMLDDDK-----GD---FVGTAVREVEEETGIQLKL---ED 210 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p~---g~~~wElPa-G~vD~g~-----Et---~~~AA~REl~EETGl~i~~---~~ 210 (307)
+|+|+++ +.++ ++||.+ |... ....|++|+ |++++|. |+ +.+||+||++||||+.+.. .+
T Consensus 61 av~v~v~-~~~g--~lLLq~--R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~ 135 (235)
T 2dho_A 61 AFSVFLF-NTEN--KLLLQQ--RSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEE 135 (235)
T ss_dssp EEEEEEE-CTTC--CEEEEE--ECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGG
T ss_pred EEEEEEE-cCCC--EEEEEE--ecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhh
Confidence 4555544 3344 577754 4332 234799994 9999851 56 4999999999999998641 24
Q ss_pred eeeccccccCCCCceeecC--CCc--cceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCC
Q 021805 211 MIDLTAFLYPSTGCKFFPS--AGG--CDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPD 284 (307)
Q Consensus 211 L~~L~~l~~~~~~~~~~~s--pg~--~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D 284 (307)
+..++.+ .|.. .+. .++.+++|++... +.. .++++|..+++|++++++.+++.+
T Consensus 136 l~~l~~~--------~y~~~~~~~~~~~e~~~vf~~~~~----------~~~--~~~~~Ev~~~~wv~~~el~~~l~~ 193 (235)
T 2dho_A 136 INYLTRI--------HYKAQSDGIWGEHEIDYILLVRMN----------VTL--NPDPNEIKSYCYVSKEELKELLKK 193 (235)
T ss_dssp SEEEEEE--------EEEEECSSSBEEEEEEEEEEEECC----------CCC--CCCTTTEEEEEEECHHHHHHHHHH
T ss_pred cEEEEEE--------EEeccCCCccceeEEEEEEEEEEC----------CCC--cCChHHEEEEEEEcHHHHHHHHhh
Confidence 5566542 2322 222 3456677876532 111 246789999999999999887653
No 72
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.18 E-value=4.9e-11 Score=108.43 Aligned_cols=114 Identities=19% Similarity=0.186 Sum_probs=73.4
Q ss_pred EEEEEEEEecCCceEEEEEEeeecCC---CCeEEEccc-eecCCC-----CCCH---HHHHHHHHHHHhCCcccc---cc
Q 021805 146 AVAVLILLDSEGETYAILTEQVRVPT---GRVILELPA-GMLDDD-----KGDF---VGTAVREVEEETGIQLKL---ED 210 (307)
Q Consensus 146 aVaVl~il~~~g~~~VLLvrQ~R~p~---g~~~wElPa-G~vD~g-----~Et~---~~AA~REl~EETGl~i~~---~~ 210 (307)
+|+|+++ +.++ ++||.+ |... ....|++|+ |++++| +|++ .+||+||++||||+.+.. .+
T Consensus 72 av~v~v~-~~~g--~lLLqr--Rs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~ 146 (246)
T 2pny_A 72 AFSVVLF-NTKN--RILIQQ--RSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPED 146 (246)
T ss_dssp EEEEEEE-CTTC--CEEEEE--ECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGG
T ss_pred EEEEEEE-eCCC--EEEEEE--ecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCccc
Confidence 4555544 3344 577754 4332 234799995 999974 1676 899999999999998641 24
Q ss_pred eeeccccccCCCCceeecC--CCc--cceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccCC
Q 021805 211 MIDLTAFLYPSTGCKFFPS--AGG--CDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPD 284 (307)
Q Consensus 211 L~~L~~l~~~~~~~~~~~s--pg~--~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~D 284 (307)
+..++.+ .|.. .+. .++.+++|++... +.. .++++|..+++|++++++.+++.+
T Consensus 147 l~~l~~~--------~y~~~~~~~~~~~e~~~vf~~~~~----------~~~--~~~~~Ev~~~~wv~~eel~~~l~~ 204 (246)
T 2pny_A 147 IVFMTIY--------HHKAKSDRIWGEHEICYLLLVRKN----------VTL--NPDPSETKSILYLSQEELWELLER 204 (246)
T ss_dssp SEEEEEE--------EEEEESSSSBEEEEEEEEEEEECC----------CCC--CCCTTTEEEEEEECHHHHHHHHHH
T ss_pred cEEEEEE--------EEEecCCCceeeeEEEEEEEEEEC----------CCC--CCChHHeeEEEEEeHHHHHHHHHh
Confidence 5566542 2322 222 3456677776532 111 246789999999999999887653
No 73
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.13 E-value=1.4e-10 Score=104.64 Aligned_cols=61 Identities=21% Similarity=0.335 Sum_probs=43.0
Q ss_pred EEEEEEEEecCCc-eEEEEEEeeecCC-CCeEEEccceecCCCCCC--------------------HHHHHHHHHHHHhC
Q 021805 146 AVAVLILLDSEGE-TYAILTEQVRVPT-GRVILELPAGMLDDDKGD--------------------FVGTAVREVEEETG 203 (307)
Q Consensus 146 aVaVl~il~~~g~-~~VLLvrQ~R~p~-g~~~wElPaG~vD~g~Et--------------------~~~AA~REl~EETG 203 (307)
++++|++.+.++. .+|||+++..... ..+.|.||||.+|++ |+ +..||+||++||||
T Consensus 10 aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~-d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE~G 88 (232)
T 3qsj_A 10 AATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPS-DAEMAKRAFGRPVCAEDDDDPALAVTALRETAEEIG 88 (232)
T ss_dssp EEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHH-HHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecC-CCCchhhhcccccccccchhhHHHHHHHHHHHHHhC
Confidence 4444444322222 4798887654432 245799999999997 65 58999999999999
Q ss_pred Cccc
Q 021805 204 IQLK 207 (307)
Q Consensus 204 l~i~ 207 (307)
+.+.
T Consensus 89 l~l~ 92 (232)
T 3qsj_A 89 WLLA 92 (232)
T ss_dssp CCCS
T ss_pred ceec
Confidence 9875
No 74
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.08 E-value=3.4e-10 Score=108.40 Aligned_cols=96 Identities=17% Similarity=0.095 Sum_probs=62.8
Q ss_pred eEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCCcccccceeeccccccCCCCceeecCCCccceEEE
Q 021805 159 TYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEIS 238 (307)
Q Consensus 159 ~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~ 238 (307)
++|||+++.......+.|+||||.+|+| ++.+|++||++||||+++.... .++.+ .+..+. ....++
T Consensus 252 g~vLL~rR~~~g~~~GlWefPGG~ve~g--t~~~al~REl~EE~Gl~v~~~~--~l~~~--------~h~~~h-~~~~~~ 318 (369)
T 3fsp_A 252 GRVLIRKRDSTGLLANLWEFPSCETDGA--DGKEKLEQMVGEQYGLQVELTE--PIVSF--------EHAFSH-LVWQLT 318 (369)
T ss_dssp SEEEEEECCSSSTTTTCEECCEEECSSS--CTHHHHHHHHTTSSSCCEEECC--CCCEE--------EEECSS-EEEEEE
T ss_pred CEEEEEECCCCCCcCCcccCCCcccCCC--CcHHHHHHHHHHHhCCceeeec--ccccE--------EEEcce-EEEEEE
Confidence 3688877654433445899999999985 8999999999999999985432 23221 122221 123445
Q ss_pred EEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhccC
Q 021805 239 LFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 283 (307)
Q Consensus 239 lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~i~ 283 (307)
+|.+... + ...|..++.|++++++.++..
T Consensus 319 ~~~~~~~----------~------~~~e~~~~~Wv~~~el~~~~l 347 (369)
T 3fsp_A 319 VFPGRLV----------H------GGPVEEPYRLAPEDELKAYAF 347 (369)
T ss_dssp EEEEEEC----------C------SSCCCTTEEEEEGGGGGGSCC
T ss_pred EEEEEEc----------C------CCCCccccEEeeHHHhhhCCC
Confidence 5554431 1 123555688999999988654
No 75
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.83 E-value=1.5e-08 Score=95.55 Aligned_cols=113 Identities=14% Similarity=0.180 Sum_probs=71.7
Q ss_pred EEEEEecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHh-CCcccccceeeccccccCCCCceee
Q 021805 149 VLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEET-GIQLKLEDMIDLTAFLYPSTGCKFF 227 (307)
Q Consensus 149 Vl~il~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EET-Gl~i~~~~L~~L~~l~~~~~~~~~~ 227 (307)
|-+++.++| +|||+ + ... |.||||+++.+ ++ ++|+||++||| |++++. ..|.. +|
T Consensus 186 vgaii~~~g--~vLL~-----~-~~G-W~LPG~~~~~~-~~--~~a~RE~~EEttGl~v~~---~~L~~---------v~ 241 (321)
T 3rh7_A 186 LGAVLEQQG--AVFLA-----G-NET-LSLPNCTVEGG-DP--ARTLAAYLEQLTGLNVTI---GFLYS---------VY 241 (321)
T ss_dssp EEEEEESSS--CEEEB-----C-SSE-EBCCEEEESSS-CH--HHHHHHHHHHHHSSCEEE---EEEEE---------EE
T ss_pred EEEEEEECC--EEEEe-----e-CCC-ccCCcccCCCC-hh--HHHHHHHHHHhcCCEEee---ceEEE---------EE
Confidence 333344555 48887 2 235 99999987654 43 59999999997 999964 34432 55
Q ss_pred cCCCccceEEEEEEEEEechhHHHHHhccCCCccCCCCceEEEEEEchhhHhhc-cCChhHHHHHHHHHHHHhcCCCC
Q 021805 228 PSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRT-TPDAKVLTAIALYEMASKEELLP 304 (307)
Q Consensus 228 ~spg~~~e~i~lf~~~~~~~~~~i~~~~g~~~g~~~~~E~i~v~wvpleel~~~-i~D~ktl~al~L~~~~~~~g~lp 304 (307)
..+.. .....+|.|+.. . ++..++.|++++|++.. +.+..+-..+..|..-++.|.++
T Consensus 242 ~~~~~-~~~~i~f~~~~~-~-----------------g~~~e~~~f~~~elp~~~~~~~~~~~~L~~y~~e~~~g~f~ 300 (321)
T 3rh7_A 242 EDKSD-GRQNIVYHALAS-D-----------------GAPRQGRFLRPAELAAAKFSSSATADIINRFVLESSIGNFG 300 (321)
T ss_dssp ECTTT-CCEEEEEEEEEC-S-----------------SCCSSSEEECHHHHTTCEESSHHHHHHHHHHHHTTSCSSCC
T ss_pred EcCCC-ceEEEEEEEEeC-C-----------------CCeeeeEEECHHHCCCcccCCHHHHHHHHHHHHHhhcCCCC
Confidence 55543 223335655431 1 12356899999999865 34666656666777666767654
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.67 E-value=1.6e-07 Score=82.66 Aligned_cols=83 Identities=19% Similarity=0.189 Sum_probs=53.3
Q ss_pred ecCCceEEEEEEeeecCCCCeEEEccceecCCCCCCHHHHHHHHHHHHhCC------cccccceeeccccccCCCCceee
Q 021805 154 DSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGI------QLKLEDMIDLTAFLYPSTGCKFF 227 (307)
Q Consensus 154 ~~~g~~~VLLvrQ~R~p~g~~~wElPaG~vD~g~Et~~~AA~REl~EETGl------~i~~~~L~~L~~l~~~~~~~~~~ 227 (307)
++.+..+|||++.. . ..|+||||.+|+| |+.++|.+||+.||+|. ++..+ ..++.+.-+.+...+|
T Consensus 68 ~~~~~phVLLlq~~-~----~~f~LPGGkle~g-E~~~eaL~REL~EELg~~~~~~~~~eIg--e~lg~wwRp~fet~~Y 139 (208)
T 3bho_A 68 HEHRLPHVLLLQLG-T----TFFKLPGGELNPG-EDEVEGLKRLMTEILGRQDGVLQDWVID--DCIGNWWRPNFEPPQY 139 (208)
T ss_dssp EETTEEEEEEEEEE-T----TEEECSEEECCTT-CCHHHHHHHHHHHHHCCCC-----CEEE--EEEEEEEECSSSSCCB
T ss_pred cCCCCcEEEEEEcC-C----CcEECCCcccCCC-CCHHHHHHHHHHHHhCCCcCCCccEEEh--heEEEEecCCCCCcCC
Confidence 34555679888752 1 2799999999998 99999999999999994 33222 2333333333333344
Q ss_pred cC----CCccceEEEEEEEEE
Q 021805 228 PS----AGGCDEEISLFLYRG 244 (307)
Q Consensus 228 ~s----pg~~~e~i~lf~~~~ 244 (307)
|. ..-..|.+.+|++.-
T Consensus 140 PYlP~Hit~pKE~~kly~V~L 160 (208)
T 3bho_A 140 PYIPAHITKPKEHKKLFLVQL 160 (208)
T ss_dssp SSCCTTCCSCSEEEEEEEEEC
T ss_pred CCCCcccCchhhheeeeeEec
Confidence 32 122467788887753
No 77
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.61 E-value=7e-08 Score=84.41 Aligned_cols=118 Identities=18% Similarity=0.182 Sum_probs=68.4
Q ss_pred eeecCCCCeEEEccceecCCCCC-CHHHHHHHHHHHHhCC-cccccceeeccccccCCCCceeecCCCccceEEEEEEEE
Q 021805 166 QVRVPTGRVILELPAGMLDDDKG-DFVGTAVREVEEETGI-QLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYR 243 (307)
Q Consensus 166 Q~R~p~g~~~wElPaG~vD~g~E-t~~~AA~REl~EETGl-~i~~~~L~~L~~l~~~~~~~~~~~spg~~~e~i~lf~~~ 243 (307)
|.|.+ ..||||||+||+| | ++++|..||+.||+|+ .+...+ .+.. ..+..| ..-..++|.|+
T Consensus 49 Q~R~~---G~weFPGGkVe~g-E~t~e~aL~REl~EElg~~~V~~~~--y~~s--------~~~~yp--~~V~LHfY~cr 112 (214)
T 3kvh_A 49 QMRFD---GLLGFPGGFVDRR-FWSLEDGLNRVLGLGLGCLRLTEAD--YLSS--------HLTEGP--HRVVAHLYARQ 112 (214)
T ss_dssp EEETT---SCEECSEEEECTT-TCCHHHHHHHSCCSCC---CCCGGG--EEEE--------EEC------CEEEEEEEEE
T ss_pred eeeeC---CEEeCCCccCCCC-CCCHHHHHHHHHHHhhCCeeeeeee--eEEE--------EeccCC--CEEEEEEEEEE
Confidence 55653 4799999999998 8 9999999999999997 454333 2222 123333 24456777776
Q ss_pred EechhHHHHHhccCCCccCC-CCceEEEEEEchhhHhhccC------------ChhHHHHHHHHHHHHhcCCCCC
Q 021805 244 GRVDKEIIMQLQGKETGLRD-HGELIKVRVVPYRELWRTTP------------DAKVLTAIALYEMASKEELLPS 305 (307)
Q Consensus 244 ~~~~~~~i~~~~g~~~g~~~-~~E~i~v~wvpleel~~~i~------------D~ktl~al~L~~~~~~~g~lp~ 305 (307)
.....-...+++.. ...| ..|..-+.-||+=.+.+-.. +++ -+|...++..+++++
T Consensus 113 l~~Ge~~~lE~~A~--~A~d~G~EvlGlvRVPlytl~D~~gGlP~FL~nsFig~ar----~qLl~aL~~l~ll~~ 181 (214)
T 3kvh_A 113 LTLEQLHAVEISAV--HSRDHGLEVLGLVRVPLYTQKDRVGGFPNFLSNAFVSTAK----CQLLFALKVLNMMPE 181 (214)
T ss_dssp CCHHHHHHHHHHHH--TSTTBTTTEEEEEEECCCBCTTSSTBHHHHHTSCBCTTHH----HHHHHHHHHTTSSCH
T ss_pred eeCCccchhhhccc--CCcccCceecceEEeeeEEeccCCCchhHHHHhhhHHHHH----HHHHHHHHHcCCCCH
Confidence 54332222222221 1223 34777788888765543311 322 356667777777764
No 78
>1t6a_A Rbstp2229 gene product; structural genomics, hypothetical protein, PSI, protein structure initiative; HET: MSE; 2.05A {Geobacillus stearothermophilus} SCOP: d.129.8.1
Probab=36.14 E-value=24 Score=27.97 Aligned_cols=40 Identities=20% Similarity=0.251 Sum_probs=31.1
Q ss_pred CCeEEEeCCCCCHHHHHhhhcChhHHHHHHHhhhhcccccCC
Q 021805 58 QPVHVVAAPGLSESDFRCAVESTLFKQWLKNLQSETGILANG 99 (307)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~~~~~~~~ 99 (307)
.-|.|+||++-+..|.-|+.++-.|-- ++|+.++.+++..
T Consensus 80 ~fIQi~LP~~AThGDKgKANEfckfLA--K~l~geL~LFNGR 119 (126)
T 1t6a_A 80 TFIDIALPPGATHGDKGKANEFSKWLA--KTLGGELHLFSGR 119 (126)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHHH--HHHCEEEECTTSC
T ss_pred ceEEEECCCCCCcCcchhHHHHHHHHH--HHhhhheeeecCe
Confidence 349999999999999999655554443 7899988887763
Done!