BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021806
(307 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LXV5|NFYA1_ARATH Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana
GN=NFYA1 PE=2 SV=1
Length = 272
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 141/264 (53%), Gaps = 35/264 (13%)
Query: 2 MPAKPD-ENRQLDRGAQSVSQSAIYSQRPWWSGTGTG----ASLAEAAAPKSSREQPNGS 56
M +KP EN + +V Q +Y++ PWW G A + + SS + PNGS
Sbjct: 1 MQSKPGRENEEEVNNHHAVQQPMMYAE-PWWKNNSFGVVPQARPSGIPSNSSSLDCPNGS 59
Query: 57 VVNGA-TYSQDG-INGQEHAHLKHIPSSTPLTMGER--LEQNSQM--------------- 97
N + S+DG +NG+ K ++T + +E N
Sbjct: 60 ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 119
Query: 98 ELVGHSIVLTSYPYTDPQHVGVITPYVPQAMIPPQLYGMHQARMPLPLEMEEEPVYVNAK 157
ELVGH I PY DP + G++ Y Q + GM + R LPL+M +EPVYVNAK
Sbjct: 120 ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAK 179
Query: 158 QYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKKLNDNAAN 217
QY GILRRR++RAKAELE+KVI+ RKPYLHESRH+HAMRRAR GGRF ++
Sbjct: 180 QYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEV------ 233
Query: 218 SAEKGMNSGA-DSSKGS-TNGTGS 239
E G ++G D +GS TN +GS
Sbjct: 234 --EAGEDAGGRDRERGSATNSSGS 255
>sp|Q945M9|NFYA9_ARATH Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana
GN=NFYA9 PE=2 SV=1
Length = 303
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 98/142 (69%), Gaps = 8/142 (5%)
Query: 98 ELVGHSI-VLTSYPYTDPQHVGVITPY--VPQAMIPPQLYGMHQARMPLPLEMEEEPVYV 154
+LVGH++ +S PY DP + GV+ Y P +P GM +RMPLP EM +EPV+V
Sbjct: 113 QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVP--YGGMPHSRMPLPPEMAQEPVFV 170
Query: 155 NAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKKLNDN 214
NAKQY+ ILRRRQ+RAKAELEKK+IK+RKPYLHESRHQHAMRR RG GGRF KK N
Sbjct: 171 NAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRF--AKKTNTE 228
Query: 215 AAN-SAEKGMNSGADSSKGSTN 235
A+ AE+ N S S+N
Sbjct: 229 ASKRKAEEKSNGHVTQSPSSSN 250
>sp|Q84JP1|NFYA7_ARATH Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana
GN=NFYA7 PE=2 SV=1
Length = 190
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
Query: 109 YPYTDPQHVGVITPYV-PQAMIPPQLYGMHQARMPLPLEMEEEPVYVNAKQYRGILRRRQ 167
YPY DP + + P P + QL G+ Q +PLP + EEPV+VNAKQY GILRRRQ
Sbjct: 58 YPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQ 117
Query: 168 SRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKKLNDNAANSA--EKGMNS 225
SRA+ E + KVIK+RKPYLHESRH HA+RR RGCGGRFLN KK +++ +S+ EK S
Sbjct: 118 SRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSHEEKSNLS 177
Query: 226 GADSSKGSTNGT 237
S+ +++GT
Sbjct: 178 AGKSAMAASSGT 189
>sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana
GN=NFYA3 PE=2 SV=2
Length = 340
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 79/107 (73%), Gaps = 3/107 (2%)
Query: 108 SYPYTDPQHVGVITP-YVPQA-MIPPQLYGMHQARMPLPLEMEE-EPVYVNAKQYRGILR 164
S+ Y DP + G++ Y+PQA PQ+ M R+PLP E+ E +PV+VNAKQY I+R
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMR 193
Query: 165 RRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKKL 211
RRQ RAK E + K+I+ARKPYLHESRH HA++R RG GGRFLNTKKL
Sbjct: 194 RRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKL 240
>sp|Q8VY64|NFYA4_ARATH Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana
GN=NFYA4 PE=2 SV=1
Length = 198
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 86/131 (65%), Gaps = 6/131 (4%)
Query: 109 YPYTDPQHVGVIT--PYVPQAM--IPPQLYGMHQARMPLPLEMEEEPVYVNAKQYRGILR 164
YPY DP + V Y+P + QL GM Q +PL + EEPV+VNAKQY GILR
Sbjct: 53 YPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILR 112
Query: 165 RRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKKLNDNAANSAEKGMN 224
RRQSRAK E + IKA+KPY+HESRH HA+RR RGCGGRFLN KK +N + E+
Sbjct: 113 RRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKK--ENGDHKEEEEAT 170
Query: 225 SGADSSKGSTN 235
S ++S+ S++
Sbjct: 171 SDENTSEASSS 181
>sp|Q9LNP6|NFYA8_ARATH Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana
GN=NFYA8 PE=2 SV=2
Length = 328
Score = 128 bits (321), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 80/110 (72%), Gaps = 10/110 (9%)
Query: 108 SYPYTDPQHVGVITP--YVPQAMI-PPQLYGMHQARMPLPLEM-EEEPVYVNAKQYRGIL 163
S+ Y DP H G + P Y+PQA I PQ+ R+PLP ++ E EPV+VNAKQ+ I+
Sbjct: 132 SFHYADP-HFGGLMPAAYLPQATIWNPQM-----TRVPLPFDLIENEPVFVNAKQFHAIM 185
Query: 164 RRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKKLND 213
RRRQ RAK E + K+IKARKPYLHESRH HA++R RG GGRFLNTKKL +
Sbjct: 186 RRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQE 235
>sp|Q9SYH4|NFYA5_ARATH Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana
GN=NFYA5 PE=2 SV=1
Length = 308
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Query: 124 VPQAMIPPQLYGMHQARMPLPLEMEE-EPVYVNAKQYRGILRRRQSRAKAELEKKVIKAR 182
P A+ ++ G+ +R+PLP ++E EP++VNAKQY ILRRR+ RAK E + K+IK R
Sbjct: 151 TPTALPHLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCR 210
Query: 183 KPYLHESRHQHAMRRARGCGGRFLNTKKLNDNAANSAEKGMNSGADSS 230
KPYLHESRH HA++RARG GGRFLNTKKL +++ + M +G + S
Sbjct: 211 KPYLHESRHLHALKRARGSGGRFLNTKKLQESSNSLCSSQMANGQNFS 258
>sp|Q9LVJ7|NFYA6_ARATH Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana
GN=NFYA6 PE=2 SV=1
Length = 308
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 73/100 (73%), Gaps = 3/100 (3%)
Query: 114 PQHVGVIT-PYVPQAMIP-PQLYGMHQARMPLPLEM-EEEPVYVNAKQYRGILRRRQSRA 170
P G ++ PY Q + PQ+ G+ +RMPLP + E EP++VNAKQY+ ILRRR+ RA
Sbjct: 132 PHFNGFLSFPYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRA 191
Query: 171 KAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKK 210
K E + K+IK RKPYLHESRH HA++R RG GGRFLNTKK
Sbjct: 192 KLEAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKK 231
>sp|Q9M9X4|NFYA2_ARATH Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana
GN=NFYA2 PE=2 SV=1
Length = 295
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 92/149 (61%), Gaps = 15/149 (10%)
Query: 105 VLTSYPYTDPQHVGVITPYVPQAMIPPQLYGMHQARMPLPLEMEEEPVYVNAKQYRGILR 164
+ T YPY + Q+ GV++ Y Q+ + +PL +E E+ +YVN+KQY GI+R
Sbjct: 101 IYTKYPYGEQQYYGVVSAYGSQSRV----------MLPLNMETEDSTIYVNSKQYHGIIR 150
Query: 165 RRQSRAKAE--LEKKVI--KARKPYLHESRHQHAMRRARGCGGRFLNTKKLN-DNAANSA 219
RRQSRAKA L++K + + RKPY+H SRH HA+RR RG GGRFLNTK N +N+ +A
Sbjct: 151 RRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNA 210
Query: 220 EKGMNSGADSSKGSTNGTGSVDSSIVQQE 248
+KG S S+ + S +S +V E
Sbjct: 211 KKGDGSMQIQSQPKPQQSNSQNSEVVHPE 239
>sp|Q8LFU0|NFYAA_ARATH Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana
GN=NFYA10 PE=2 SV=2
Length = 269
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 83/131 (63%), Gaps = 21/131 (16%)
Query: 104 IVLTSYPYTDPQHVGVITPYVPQAMIPPQLYGMHQARMPLPLEMEEE---PVYVNAKQYR 160
++ T +P+ + Q+ GV++ Y Q R+ +PL+ME E +YVN+KQY
Sbjct: 95 MMYTKHPHVE-QYYGVVSAYGSQ---------RSSGRVMIPLKMETEEDGTIYVNSKQYH 144
Query: 161 GILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKKLNDNAANSAE 220
GI+RRRQSRAKAE K+ + RKPY+H SRH HAMRR RG GGRFLNTK A++A+
Sbjct: 145 GIIRRRQSRAKAE---KLSRCRKPYMHHSRHLHAMRRPRGSGGRFLNTK-----TADAAK 196
Query: 221 KGMNSGADSSK 231
+ S + SS+
Sbjct: 197 QSKPSNSQSSE 207
>sp|P23708|NFYA_MOUSE Nuclear transcription factor Y subunit alpha OS=Mus musculus
GN=Nfya PE=1 SV=2
Length = 346
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 140 RMPLP-LEM-EEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRR 197
R+PLP EM EEEP+YVNAKQY IL+RRQ+RAK E E K+ K R+ YLHESRH+HAM R
Sbjct: 250 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 309
Query: 198 ARGCGGRFLNTKK 210
RG GGRF + K+
Sbjct: 310 KRGEGGRFFSPKE 322
>sp|P23511|NFYA_HUMAN Nuclear transcription factor Y subunit alpha OS=Homo sapiens
GN=NFYA PE=1 SV=2
Length = 347
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 140 RMPLP-LEM-EEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRR 197
R+PLP EM EEEP+YVNAKQY IL+RRQ+RAK E E K+ K R+ YLHESRH+HAM R
Sbjct: 251 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 310
Query: 198 ARGCGGRFLNTKK 210
RG GGRF + K+
Sbjct: 311 KRGEGGRFFSPKE 323
>sp|P18576|NFYA_RAT Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus
GN=Nfya PE=1 SV=1
Length = 341
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 140 RMPLP-LEM-EEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRR 197
R+PLP EM EEEP+YVNAKQY IL+RRQ+RAK E E K+ K R+ YLHESRH+HAM R
Sbjct: 245 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 304
Query: 198 ARGCGGRFLNTKK 210
RG GGRF + K+
Sbjct: 305 KRGEGGRFFSPKE 317
>sp|Q5E9S2|NFYA_BOVIN Nuclear transcription factor Y subunit alpha OS=Bos taurus GN=NFYA
PE=2 SV=1
Length = 341
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 57/73 (78%), Gaps = 2/73 (2%)
Query: 140 RMPLP-LEM-EEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRR 197
R+PLP EM EEEP+YVNAKQY IL+RRQ+RAK E E K+ K R+ YLHESRH+HAM R
Sbjct: 245 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 304
Query: 198 ARGCGGRFLNTKK 210
RG GGRF + K+
Sbjct: 305 KRGEGGRFFSPKE 317
>sp|Q54S29|NFYA_DICDI Nuclear transcription factor Y subunit alpha OS=Dictyostelium
discoideum GN=nfyA PE=3 SV=1
Length = 517
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 55/77 (71%), Gaps = 7/77 (9%)
Query: 130 PPQLYGMHQARMPLPLEMEEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHES 189
P LY ARM E+ EEP+YVNAKQY IL+RR +RAK E E K+ K RK Y HES
Sbjct: 216 PHMLY----ARMA---EIVEEPLYVNAKQYNRILKRRAARAKLESENKLPKTRKAYQHES 268
Query: 190 RHQHAMRRARGCGGRFL 206
RHQHA+RR RGCGGRFL
Sbjct: 269 RHQHAIRRQRGCGGRFL 285
>sp|P06774|HAP2_YEAST Transcriptional activator HAP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAP2 PE=1 SV=1
Length = 265
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 147 MEEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFL 206
+ E+P YVNAKQY IL+RR +RAK E + ++ + RKPYLHESRH+HAMRR RG GGRFL
Sbjct: 156 IAEQPFYVNAKQYYRILKRRYARAKLEEKLRISRERKPYLHESRHKHAMRRPRGEGGRFL 215
Query: 207 NTKKLNDNAANSAEKGMNSGADSSKGSTNGTGSVDSSIVQQE 248
++ A K SGA ++ + + I+Q++
Sbjct: 216 TAAEIK------AMKSKKSGASDDPDDSHEDKKITTKIIQEQ 251
>sp|P53768|HAP2_KLULA Transcriptional activator HAP2 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=HAP2 PE=3 SV=1
Length = 300
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 50/70 (71%)
Query: 137 HQARMPLPLEMEEEPVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMR 196
H + P E E+P YVNAKQY IL+RR +RAK E K+ + R+PYLHESRH+HAMR
Sbjct: 172 HDMNIISPSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMR 231
Query: 197 RARGCGGRFL 206
R RG GGRFL
Sbjct: 232 RPRGQGGRFL 241
>sp|P24488|HAP2_SCHPO Transcriptional activator hap2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hap2 PE=3 SV=1
Length = 334
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 150 EPVYVNAKQYRGILRRRQSRAKAELE-KKVIKARKPYLHESRHQHAMRRARGCGGRFLNT 208
E +YVNAKQY IL+RR++RAK E + V +KPYLHESRH+HAMRR RG GGRFL
Sbjct: 8 EGLYVNAKQYHRILKRREARAKLEERLRGVQTTKKPYLHESRHKHAMRRPRGPGGRFLTA 67
Query: 209 KKL 211
K+
Sbjct: 68 DKV 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.124 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,392,960
Number of Sequences: 539616
Number of extensions: 4950291
Number of successful extensions: 22753
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 18677
Number of HSP's gapped (non-prelim): 3487
length of query: 307
length of database: 191,569,459
effective HSP length: 117
effective length of query: 190
effective length of database: 128,434,387
effective search space: 24402533530
effective search space used: 24402533530
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)